Your job contains 1 sequence.
>psy3092
MKPDTATLLVNFNSGGANSMSSFGSNNHSSSHNNGSSNSSIISPYPPNHPLCGSKHLCSI
CGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDKRQRNRCQYCRYQKCLN
MGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPADQDIVNEQ
QATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDG
ILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL
KSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSIEV
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3092
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NSP3 - symbol:RXRG "Retinoic acid receptor RX... 1034 2.0e-104 1
ZFIN|ZDB-GENE-070314-2 - symbol:rxraa "retinoid X recepto... 1030 5.3e-104 1
ZFIN|ZDB-GENE-980526-36 - symbol:rxrga "retinoid x recept... 1029 6.7e-104 1
UNIPROTKB|P28701 - symbol:RXRG "Retinoic acid receptor RX... 1027 1.1e-103 1
UNIPROTKB|P51129 - symbol:rxrg "Retinoic acid receptor RX... 1022 3.7e-103 1
UNIPROTKB|B3KY83 - symbol:RXRA "cDNA FLJ16020 fis, clone ... 1017 1.3e-102 1
UNIPROTKB|P19793 - symbol:RXRA "Retinoic acid receptor RX... 1017 1.3e-102 1
UNIPROTKB|F1P6M9 - symbol:RXRA "Uncharacterized protein" ... 1014 2.6e-102 1
MGI|MGI:98214 - symbol:Rxra "retinoid X receptor alpha" s... 1014 2.6e-102 1
UNIPROTKB|P51128 - symbol:rxra "Retinoic acid receptor RX... 1013 3.3e-102 1
RGD|3610 - symbol:Rxra "retinoid X receptor alpha" specie... 1013 3.3e-102 1
UNIPROTKB|Q0VJ96 - symbol:Rxra "Retinoic acid receptor RX... 1013 3.3e-102 1
UNIPROTKB|F1NH64 - symbol:RXRA "Uncharacterized protein" ... 1011 5.4e-102 1
MGI|MGI:98216 - symbol:Rxrg "retinoid X receptor gamma" s... 1010 6.9e-102 1
UNIPROTKB|F1MX52 - symbol:RXRA "Uncharacterized protein" ... 1005 2.3e-101 1
UNIPROTKB|Q0GFF6 - symbol:RXRG "Retinoic acid receptor RX... 1005 2.3e-101 1
UNIPROTKB|P48443 - symbol:RXRG "Retinoic acid receptor RX... 1003 3.8e-101 1
UNIPROTKB|Q0VC20 - symbol:RXRG "Retinoic acid receptor RX... 1000 7.9e-101 1
RGD|620046 - symbol:Rxrg "retinoid X receptor gamma" spec... 1000 7.9e-101 1
UNIPROTKB|E2RD69 - symbol:RXRG "Uncharacterized protein" ... 999 1.0e-100 1
UNIPROTKB|F8VZR5 - symbol:RXRB "Retinoic acid receptor RX... 993 4.4e-100 1
UNIPROTKB|F8VNP5 - symbol:RXRB "Retinoic acid receptor RX... 982 6.4e-99 1
ZFIN|ZDB-GENE-040718-34 - symbol:rxrgb "retinoid X recept... 981 8.2e-99 1
UNIPROTKB|A6H7I6 - symbol:RXRB "Uncharacterized protein" ... 975 3.5e-98 1
UNIPROTKB|Q5TJF7 - symbol:RXRB "Retinoic acid receptor RX... 975 3.5e-98 1
UNIPROTKB|P28702 - symbol:RXRB "Retinoic acid receptor RX... 975 3.5e-98 1
UNIPROTKB|A5D9P3 - symbol:RXRB "Retinoid X receptor, beta... 975 3.5e-98 1
ZFIN|ZDB-GENE-990415-243 - symbol:rxrab "retinoid x recep... 970 1.2e-97 1
MGI|MGI:98215 - symbol:Rxrb "retinoid X receptor beta" sp... 969 1.5e-97 1
RGD|3611 - symbol:Rxrb "retinoid X receptor beta" species... 969 1.5e-97 1
UNIPROTKB|F1PUF6 - symbol:RXRB "Retinoic acid receptor RX... 960 1.4e-96 1
UNIPROTKB|A5D9P5 - symbol:RXRB "Retinoid X receptor, beta... 960 1.4e-96 1
UNIPROTKB|F1M9P1 - symbol:Rxrb "Retinoic acid receptor RX... 955 4.7e-96 1
ZFIN|ZDB-GENE-980526-436 - symbol:rxrba "retinoid x recep... 947 3.3e-95 1
UNIPROTKB|E9PK95 - symbol:RXRB "Retinoic acid receptor RX... 944 6.8e-95 1
ZFIN|ZDB-GENE-990415-242 - symbol:rxrbb "retinoid x recep... 924 9.0e-93 1
UNIPROTKB|K7GQM0 - symbol:RXRB "Uncharacterized protein" ... 914 1.0e-91 1
UNIPROTKB|Q0GFF5 - symbol:RXRbeta "Retinoid X receptor be... 914 1.0e-91 1
FB|FBgn0003964 - symbol:usp "ultraspiracle" species:7227 ... 380 7.3e-82 3
MGI|MGI:1353604 - symbol:Hnf4g "hepatocyte nuclear factor... 538 7.2e-52 1
UNIPROTKB|F1MGG2 - symbol:HNF4G "Uncharacterized protein"... 534 1.9e-51 1
UNIPROTKB|F1N2D7 - symbol:HNF4G "Uncharacterized protein"... 534 1.9e-51 1
UNIPROTKB|E2R9K8 - symbol:HNF4G "Uncharacterized protein"... 534 1.9e-51 1
UNIPROTKB|E1C7C2 - symbol:HNF4G "Uncharacterized protein"... 532 3.1e-51 1
UNIPROTKB|Q7YRQ5 - symbol:HNF4A "Uncharacterized protein"... 532 3.1e-51 1
UNIPROTKB|E2R9S0 - symbol:HNF4A "Uncharacterized protein"... 532 3.1e-51 1
UNIPROTKB|Q1I181 - symbol:HNF4A "Uncharacterized protein"... 531 4.0e-51 1
UNIPROTKB|Q14541 - symbol:HNF4G "Hepatocyte nuclear facto... 527 1.1e-50 1
UNIPROTKB|F1NZ15 - symbol:HNF4A "Uncharacterized protein"... 525 1.7e-50 1
MGI|MGI:109128 - symbol:Hnf4a "hepatic nuclear factor 4, ... 525 1.7e-50 1
RGD|2810 - symbol:Hnf4a "hepatocyte nuclear factor 4, alp... 525 1.7e-50 1
UNIPROTKB|E9PSV4 - symbol:Hnf4a "Hepatocyte nuclear facto... 525 1.7e-50 1
UNIPROTKB|G3V750 - symbol:Hnf4a "Hepatocyte nuclear facto... 525 1.7e-50 1
FB|FBgn0004914 - symbol:Hnf4 "Hepatocyte nuclear factor 4... 524 2.2e-50 1
ZFIN|ZDB-GENE-060929-100 - symbol:hnf4g "hepatocyte nucle... 524 2.2e-50 1
ZFIN|ZDB-GENE-030131-1077 - symbol:hnf4a "hepatocyte nucl... 521 4.6e-50 1
UNIPROTKB|E1BS38 - symbol:HNF4beta "Uncharacterized prote... 519 7.4e-50 1
UNIPROTKB|F1N848 - symbol:HNF4beta "Uncharacterized prote... 517 1.2e-49 1
UNIPROTKB|P41235 - symbol:HNF4A "Hepatocyte nuclear facto... 517 1.2e-49 1
UNIPROTKB|F1N3S3 - symbol:NR2F6 "Uncharacterized protein"... 302 4.7e-48 2
UNIPROTKB|E2R3D0 - symbol:NR2F6 "Uncharacterized protein"... 302 4.7e-48 2
UNIPROTKB|P10588 - symbol:NR2F6 "Nuclear receptor subfami... 302 4.7e-48 2
UNIPROTKB|F1S962 - symbol:NR2F6 "Uncharacterized protein"... 302 4.7e-48 2
ZFIN|ZDB-GENE-990415-253 - symbol:nr2f5 "nuclear receptor... 493 4.2e-47 1
UNIPROTKB|Q9TTR7 - symbol:NR2F2 "COUP transcription facto... 492 5.4e-47 1
ZFIN|ZDB-GENE-040426-2351 - symbol:nr2f6b "nuclear recept... 296 6.8e-47 2
UNIPROTKB|Q90733 - symbol:NR2F2 "COUP transcription facto... 491 6.9e-47 1
UNIPROTKB|E2QW41 - symbol:NR2F2 "Uncharacterized protein"... 491 6.9e-47 1
UNIPROTKB|P24468 - symbol:NR2F2 "COUP transcription facto... 491 6.9e-47 1
UNIPROTKB|F1SCJ6 - symbol:NR2F2 "Uncharacterized protein"... 491 6.9e-47 1
MGI|MGI:1352452 - symbol:Nr2f2 "nuclear receptor subfamil... 491 6.9e-47 1
RGD|69305 - symbol:Nr2f2 "nuclear receptor subfamily 2, g... 491 6.9e-47 1
UNIPROTKB|O09018 - symbol:Nr2f2 "COUP transcription facto... 491 6.9e-47 1
UNIPROTKB|Q9TTR8 - symbol:NR2F1 "COUP transcription facto... 489 1.1e-46 1
UNIPROTKB|P10589 - symbol:NR2F1 "COUP transcription facto... 489 1.1e-46 1
UNIPROTKB|F1RNX7 - symbol:NR2F1 "Uncharacterized protein"... 489 1.1e-46 1
MGI|MGI:1352451 - symbol:Nr2f1 "nuclear receptor subfamil... 489 1.1e-46 1
UNIPROTKB|F2Z3S9 - symbol:Nr2f1 "Protein Nr2f1" species:1... 489 1.1e-46 1
ZFIN|ZDB-GENE-030131-4362 - symbol:nr2f6a "nuclear recept... 291 1.4e-46 2
ZFIN|ZDB-GENE-980526-115 - symbol:nr2f1a "nuclear recepto... 487 1.8e-46 1
UNIPROTKB|F1N056 - symbol:NR2F1 "COUP transcription facto... 482 6.2e-46 1
MGI|MGI:1352453 - symbol:Nr2f6 "nuclear receptor subfamil... 479 1.3e-45 1
MGI|MGI:1346317 - symbol:Nr2e3 "nuclear receptor subfamil... 293 5.3e-45 2
ZFIN|ZDB-GENE-030131-2730 - symbol:hnf4b "hepatic nuclear... 473 5.6e-45 1
ZFIN|ZDB-GENE-040426-1438 - symbol:nr2f1b "nuclear recept... 473 5.6e-45 1
UNIPROTKB|F1PX81 - symbol:NR2F2 "Uncharacterized protein"... 472 7.1e-45 1
ZFIN|ZDB-GENE-990415-252 - symbol:nr2f2 "nuclear receptor... 471 9.1e-45 1
UNIPROTKB|F1ML62 - symbol:NR2E3 "Photoreceptor-specific n... 288 1.1e-44 2
UNIPROTKB|Q9Y5X4 - symbol:NR2E3 "Photoreceptor-specific n... 288 1.1e-44 2
UNIPROTKB|F1SIS0 - symbol:F1SIS0 "Uncharacterized protein... 289 1.4e-44 2
RGD|621685 - symbol:Nr2f6 "nuclear receptor subfamily 2, ... 468 1.9e-44 1
UNIPROTKB|O09017 - symbol:Nr2f6 "Nuclear receptor subfami... 468 1.9e-44 1
UNIPROTKB|O42101 - symbol:NR5A2 "Nuclear receptor subfami... 289 5.5e-44 2
UNIPROTKB|Q9TTF0 - symbol:NR2E3 "Photoreceptor-specific n... 278 1.3e-43 2
UNIPROTKB|B4E2P3 - symbol:NR5A2 "cDNA FLJ52395, highly si... 283 1.4e-43 2
UNIPROTKB|F1NVB5 - symbol:NR5A2 "Nuclear receptor subfami... 282 3.5e-43 2
UNIPROTKB|F1PXN4 - symbol:NR5A2 "Uncharacterized protein"... 283 3.6e-43 2
UNIPROTKB|O00482 - symbol:NR5A2 "Nuclear receptor subfami... 283 4.9e-43 2
ZFIN|ZDB-GENE-040702-6 - symbol:nr5a1b "nuclear receptor ... 282 7.4e-43 2
UNIPROTKB|Q7SIF6 - symbol:Q7SIF6 "Gene regulation protein... 310 1.1e-42 2
WARNING: Descriptions of 765 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NSP3 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 IPI:IPI00600229 EMBL:AADN02034021 EMBL:AADN02034022
EMBL:AADN02034023 Ensembl:ENSGALT00000005387 OMA:FIKFPAG
Uniprot:F1NSP3
Length = 467
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 204/305 (66%), Positives = 236/305 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 130 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 189
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++ER NE ESTSG +MPVERILEAE
Sbjct: 190 RQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSENEAESTSGGSEDMPVERILEAELA 249
Query: 165 VDMKQEPADQDIVNEQQA----TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRA 220
V+ K E A D+ E TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRA
Sbjct: 250 VEPKTE-AYSDVNTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRA 308
Query: 221 GWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMD 280
GWNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MD
Sbjct: 309 GWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMD 368
Query: 281 KTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLP 340
K+ELGCLR I+LFNPD +GL S VE LREKVY +LE YT+ + E+PGRFAKLLLRLP
Sbjct: 369 KSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRFAKLLLRLP 428
Query: 341 SLRSI 345
+LRSI
Sbjct: 429 ALRSI 433
>ZFIN|ZDB-GENE-070314-2 [details] [associations]
symbol:rxraa "retinoid X receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CU062650 EMBL:BX001031
IPI:IPI00994409 ProteinModelPortal:F1R1Y8
Ensembl:ENSDART00000124173 ArrayExpress:F1R1Y8 Bgee:F1R1Y8
Uniprot:F1R1Y8
Length = 495
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 205/307 (66%), Positives = 237/307 (77%)
Query: 46 PPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXX 105
P PL +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 156 PSGTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKR 215
Query: 106 XXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRV 165
L MGMKREAVQEERQR KER NEVESTS +MPVE+ILEAE V
Sbjct: 216 QRNRCQYCRYQKCLAMGMKREAVQEERQRAKERSENEVESTSSANEDMPVEKILEAELAV 275
Query: 166 DMKQE-------PADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
+ K E P + N+ TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 276 EPKTETYIETNVPMPSNSPNDP-VTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 334
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 335 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 394
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 395 MDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 454
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 455 LPALRSI 461
>ZFIN|ZDB-GENE-980526-36 [details] [associations]
symbol:rxrga "retinoid x receptor, gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-36 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:U29940 EMBL:BC059576
IPI:IPI00511229 PIR:I50515 RefSeq:NP_571292.2 UniGene:Dr.348
ProteinModelPortal:Q90416 SMR:Q90416 STRING:Q90416 GeneID:30464
KEGG:dre:30464 CTD:30464 OrthoDB:EOG42RD7K NextBio:20806858
ArrayExpress:Q90416 Uniprot:Q90416
Length = 441
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 202/304 (66%), Positives = 237/304 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P SKH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y CR+ ++C ID
Sbjct: 104 YPCGSPGSLSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDK 163
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR +ER NEV+S+S EMPVE+IL+AE
Sbjct: 164 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGRERSDNEVDSSSSFNEEMPVEKILDAELA 223
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
V+ K E + + N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LLRAG
Sbjct: 224 VEPKTEAYMESSMSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAG 283
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS++VKDGILLA G+ V+RSSAH AGVG IFDRVLTELVSKMR+M+MDK
Sbjct: 284 WNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMRDMQMDK 343
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
TELGCLR I+LFNPD +GL + VE LREKVY SLE YT+ N+ ++PGRFAKLLLRLP+
Sbjct: 344 TELGCLRAIVLFNPDAKGLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPA 403
Query: 342 LRSI 345
LRSI
Sbjct: 404 LRSI 407
>UNIPROTKB|P28701 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 EMBL:X58997 EMBL:S72435 IPI:IPI00584417 IPI:IPI00600229
PIR:A43781 PIR:S46479 RefSeq:NP_990625.1 UniGene:Gga.717
ProteinModelPortal:P28701 SMR:P28701 STRING:P28701 GeneID:396231
KEGG:gga:396231 InParanoid:P28701 NextBio:20816283 Uniprot:P28701
Length = 467
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 203/305 (66%), Positives = 235/305 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 130 YPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 189
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQ ++ER NE ESTSG +MPVERILEAE
Sbjct: 190 RQRNRCQYCRYQKCLAMGMKREAVQEERQGSRERSENEAESTSGGSEDMPVERILEAELA 249
Query: 165 VDMKQEPADQDIVNEQQA----TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRA 220
V+ K E A D+ E TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRA
Sbjct: 250 VEPKTE-AYSDVNTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRA 308
Query: 221 GWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMD 280
GWNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MD
Sbjct: 309 GWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMD 368
Query: 281 KTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLP 340
K+ELGCLR I+LFNPD +GL S VE LREKVY +LE YT+ + E+PGRFAKLLLRLP
Sbjct: 369 KSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRFAKLLLRLP 428
Query: 341 SLRSI 345
+LRSI
Sbjct: 429 ALRSI 433
>UNIPROTKB|P51129 [details] [associations]
symbol:rxrg "Retinoic acid receptor RXR-gamma" species:8355
"Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11443
PIR:D41977 ProteinModelPortal:P51129 SMR:P51129 Uniprot:P51129
Length = 470
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 201/304 (66%), Positives = 234/304 (76%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
Y N P +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 133 YSCNSPGALTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTCRDSKDCLIDK 192
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++E+ E ESTS T EMPVERILEAE
Sbjct: 193 RQRNRCQYCRYQKCLAMGMKREAVQEERQRSREKSDTEAESTSSTSEEMPVERILEAELA 252
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
VD K E D + N TNIC A DKQLF LV+WAK IP+F+ LPLEDQV+LLRAG
Sbjct: 253 VDPKIEAFGDAGLPNSTNDPVTNICHAADKQLFTLVEWAKRIPYFSDLPLEDQVILLRAG 312
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M MDK
Sbjct: 313 WNELLIASFSHRSVSVQDGILLATGLHVHRSSAHNAGVGSIFDRVLTELVSKMKDMDMDK 372
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + ++PGRFAKLLLRLP+
Sbjct: 373 SELGCLRAIVLFNPDAKGLSNAAEVEALREKVYATLESYTKQKYPDQPGRFAKLLLRLPA 432
Query: 342 LRSI 345
LRSI
Sbjct: 433 LRSI 436
>UNIPROTKB|B3KY83 [details] [associations]
symbol:RXRA "cDNA FLJ16020 fis, clone BRAMY2003287, highly
similar to RETINOIC ACID RECEPTOR RXR-ALPHA" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060687 "regulation
of branching involved in prostate gland morphogenesis"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006954
GO:GO:0045944 GO:GO:0051384 GO:GO:0007565 GO:GO:0001889
GO:GO:0007494 GO:GO:0044212 GO:GO:0043065 GO:GO:0032526
GO:GO:0003690 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038
GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0055012 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:AC156789 EMBL:AL354796 EMBL:AL669970 EMBL:AL683798
UniGene:Hs.590886 HGNC:HGNC:10477 EMBL:AK131192 IPI:IPI01011260
SMR:B3KY83 STRING:B3KY83 Ensembl:ENST00000540193 Uniprot:B3KY83
Length = 365
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 202/307 (65%), Positives = 239/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 25 HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 84
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R+ NEVESTS +MPVERILEAE
Sbjct: 85 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELA 144
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E + ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 145 VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 204
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 205 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 264
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 265 MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 324
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 325 LPALRSI 331
>UNIPROTKB|P19793 [details] [associations]
symbol:RXRA "Retinoic acid receptor RXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0044323 "retinoic acid-responsive element
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IDA] [GO:0019048 "virus-host interaction"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0006766 "vitamin metabolic process" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0003708 "retinoic acid receptor activity"
evidence=TAS] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0070644 "vitamin D response element binding"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471090 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0008203 GO:GO:0001889 GO:GO:0044255
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 GO:GO:0000790 GO:GO:0003713 GO:GO:0032526
GO:GO:0003690 GO:GO:0046982 GO:GO:0001890
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0033189
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0010269 GO:GO:0031490 GO:GO:0033280 GO:GO:0031103
GO:GO:0060038 GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606
GO:GO:0006766 PDB:1R0N PDBsum:1R0N GO:GO:0060528 GO:GO:0035357
GO:GO:0055012 GO:GO:0044323 PDB:1FM6 PDB:1FM9 PDB:1K74 PDB:1RDT
PDB:1XV9 PDB:1XVP PDB:3H0A PDBsum:1FM6 PDBsum:1FM9 PDBsum:1K74
PDBsum:1RDT PDBsum:1XV9 PDBsum:1XVP PDBsum:3H0A PDB:1MV9 PDB:1MVC
PDB:1MZN PDB:2P1T PDB:2P1U PDB:2P1V PDB:2ZXZ PDB:2ZY0 PDB:3DZU
PDB:3DZY PDB:3E00 PDB:3E94 PDB:3FUG PDB:3KWY PDB:3OAP PDB:3OZJ
PDB:3PCU PDB:3R5M PDBsum:1MV9 PDBsum:1MVC PDBsum:1MZN PDBsum:2P1T
PDBsum:2P1U PDBsum:2P1V PDBsum:2ZXZ PDBsum:2ZY0 PDBsum:3DZU
PDBsum:3DZY PDBsum:3E00 PDBsum:3E94 PDBsum:3FUG PDBsum:3KWY
PDBsum:3OAP PDBsum:3OZJ PDBsum:3PCU PDBsum:3R5M PDB:1XLS
PDBsum:1XLS PDB:3R29 PDB:3R2A PDBsum:3R29 PDBsum:3R2A PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
DrugBank:DB00523 DrugBank:DB00926 PDB:1DSZ PDBsum:1DSZ
DrugBank:DB00210 OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:X52773 EMBL:AB307705 EMBL:AC156789 EMBL:AL354796
EMBL:AL669970 EMBL:AL683798 EMBL:BC110998 EMBL:DQ303444
IPI:IPI00418394 PIR:S09592 RefSeq:NP_002948.1 UniGene:Hs.590886
PDB:1BY4 PDB:1FBY PDB:1G1U PDB:1G5Y PDB:1LBD PDB:1RXR PDB:1YNW
PDB:2NLL PDB:3NSP PDB:3NSQ PDB:3UVV PDBsum:1BY4 PDBsum:1FBY
PDBsum:1G1U PDBsum:1G5Y PDBsum:1LBD PDBsum:1RXR PDBsum:1YNW
PDBsum:2NLL PDBsum:3NSP PDBsum:3NSQ PDBsum:3UVV DisProt:DP00062
ProteinModelPortal:P19793 SMR:P19793 DIP:DIP-641N IntAct:P19793
MINT:MINT-98407 STRING:P19793 PhosphoSite:P19793 DMDM:133701
PaxDb:P19793 PRIDE:P19793 DNASU:6256 Ensembl:ENST00000481739
GeneID:6256 KEGG:hsa:6256 UCSC:uc004cfb.2 CTD:6256
GeneCards:GC09P137208 HGNC:HGNC:10477 HPA:CAB004565 HPA:CAB005352
MIM:180245 neXtProt:NX_P19793 PharmGKB:PA34890 InParanoid:P19793
KO:K08524 OMA:KHFLPLD BindingDB:P19793 ChEMBL:CHEMBL2061
EvolutionaryTrace:P19793 GenomeRNAi:6256 NextBio:24295
PMAP-CutDB:P19793 ArrayExpress:P19793 Bgee:P19793 CleanEx:HS_RXRA
Genevestigator:P19793 GermOnline:ENSG00000186350 Uniprot:P19793
Length = 462
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 202/307 (65%), Positives = 239/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 122 HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 181
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R+ NEVESTS +MPVERILEAE
Sbjct: 182 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVERILEAELA 241
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E + ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 242 VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 301
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 302 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 361
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 362 MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 421
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 422 LPALRSI 428
>UNIPROTKB|F1P6M9 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 InterPro:IPR021780
Pfam:PF11825 OMA:KHFLPLD EMBL:AAEX03006790
Ensembl:ENSCAFT00000031555 Uniprot:F1P6M9
Length = 486
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 201/307 (65%), Positives = 239/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 146 HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 205
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R+ NEVESTS +MPVE+ILEAE
Sbjct: 206 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELA 265
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E D ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 266 VEPKTETYVDANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 325
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 326 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 385
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDK+ELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 386 MDKSELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 445
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 446 LPALRSI 452
>MGI|MGI:98214 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001890 "placenta development"
evidence=IMP] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003677 "DNA binding" evidence=ISO;IDA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IGI] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO;IDA] [GO:0004886 "9-cis retinoic acid receptor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0007507 "heart development" evidence=IMP;TAS]
[GO:0007566 "embryo implantation" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=TAS] [GO:0019048 "virus-host interaction"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0031490 "chromatin DNA
binding" evidence=IDA] [GO:0031641 "regulation of myelination"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032526 "response to retinoic acid" evidence=ISO] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO;IDA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=TAS] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IGI;IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IGI;IMP;TAS]
[GO:0060485 "mesenchyme development" evidence=TAS] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060978 "angiogenesis involved in
coronary vascular morphogenesis" evidence=TAS] [GO:0061032
"visceral serous pericardium development" evidence=TAS]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98214 GO:GO:0019048 GO:GO:0008285
GO:GO:0005654 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001701 GO:GO:0006954 GO:GO:0045944
GO:GO:0051384 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 Reactome:REACT_127416 GO:GO:0000790 GO:GO:0032526
GO:GO:0060978 GO:GO:0003690 GO:GO:0010629 GO:GO:0001893
GO:GO:0033189 GO:GO:0010269 GO:GO:0031490 GO:GO:0033280
GO:GO:0007566 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 Reactome:REACT_27166 HOVERGEN:HBG005606 GO:GO:0061032
GO:GO:0060528 GO:GO:0060485 GeneTree:ENSGT00690000101777
GO:GO:0035357 PDB:1XDK PDBsum:1XDK GO:GO:0055012 GO:GO:0044323
PDB:3A9E PDBsum:3A9E PDB:1DKF PDBsum:1DKF HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 OMA:KHFLPLD EMBL:M84817 EMBL:X66223
IPI:IPI00467109 PIR:S26668 RefSeq:NP_035435.1 UniGene:Mm.24624
ProteinModelPortal:P28700 SMR:P28700 IntAct:P28700
MINT:MINT-2775018 STRING:P28700 PhosphoSite:P28700 PRIDE:P28700
Ensembl:ENSMUST00000077257 Ensembl:ENSMUST00000166775 GeneID:20181
KEGG:mmu:20181 InParanoid:P28700 BindingDB:P28700 ChEMBL:CHEMBL3084
ChiTaRS:RXRA EvolutionaryTrace:P28700 NextBio:297705 Bgee:P28700
CleanEx:MM_RXRA Genevestigator:P28700 GermOnline:ENSMUSG00000015846
GO:GO:0070644 Uniprot:P28700
Length = 467
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 201/307 (65%), Positives = 239/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 127 HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 186
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R+ NEVESTS +MPVE+ILEAE
Sbjct: 187 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELA 246
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E + ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 247 VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 306
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 307 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 366
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 367 MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 426
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 427 LPALRSI 433
>UNIPROTKB|P51128 [details] [associations]
symbol:rxra "Retinoic acid receptor RXR-alpha" species:8355
"Xenopus laevis" [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11446
PIR:C41977 ProteinModelPortal:P51128 SMR:P51128 Uniprot:P51128
Length = 488
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 201/309 (65%), Positives = 239/309 (77%)
Query: 44 PYPPNHPLCG-SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P P+ + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+I
Sbjct: 146 PMHPSGAMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCMI 205
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
D L MGMKREAVQEERQR KER+ NEVES++ +MPVE+ILEAE
Sbjct: 206 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERNENEVESSNSANEDMPVEKILEAE 265
Query: 163 QRVDMKQEP---ADQDIVNEQQA---TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVL 216
V+ K E A+ + + TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+
Sbjct: 266 HAVEPKTETYTEANMGLAPNSPSDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVI 325
Query: 217 LLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE 276
LLRAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+
Sbjct: 326 LLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRD 385
Query: 277 MKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLL 336
M+MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLL
Sbjct: 386 MQMDKTELGCLRAIVLFNPDSKGLSNPLEVEALREKVYASLEAYCKQKYPEQPGRFAKLL 445
Query: 337 LRLPSLRSI 345
LRLP+LRSI
Sbjct: 446 LRLPALRSI 454
>RGD|3610 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear
chromatin" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001890 "placenta development" evidence=IEP;ISO]
[GO:0001893 "maternal placenta development" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEP]
[GO:0007494 "midgut development" evidence=IEP] [GO:0007507 "heart
development" evidence=ISO] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0007568 "aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation" evidence=IMP]
[GO:0010269 "response to selenium ion" evidence=IEP] [GO:0014070
"response to organic cyclic compound" evidence=IEP] [GO:0019048
"virus-host interaction" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0031641 "regulation of myelination"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032526 "response to retinoic acid" evidence=IEP;ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=IEP] [GO:0033189
"response to vitamin A" evidence=IEP] [GO:0033280 "response to
vitamin D" evidence=IEP] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA;ISO] [GO:0042809
"vitamin D receptor binding" evidence=IEA;ISO] [GO:0042974 "retinoic
acid receptor binding" evidence=IPI] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044323 "retinoic acid-responsive
element binding" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP;IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA;ISO] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA;ISO] [GO:0070644 "vitamin D response element binding"
evidence=IEA;ISO] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0005634 GO:GO:0019048
GO:GO:0008285 GO:GO:0006355 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122 GO:GO:0043065
GO:GO:0000790 GO:GO:0032526 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
GO:GO:0070644 EMBL:L06482 IPI:IPI00188860 PIR:A47278 PIR:I67427
UniGene:Rn.108206 ProteinModelPortal:Q05343 SMR:Q05343 STRING:Q05343
PhosphoSite:Q05343 UCSC:RGD:3610 InParanoid:Q05343 BindingDB:Q05343
ChEMBL:CHEMBL4431 ArrayExpress:Q05343 Genevestigator:Q05343
GermOnline:ENSRNOG00000009446 Uniprot:Q05343
Length = 467
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 201/307 (65%), Positives = 239/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 127 HPSGNMSSFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 186
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R+ NEVESTS +MPVE+ILEAE
Sbjct: 187 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELA 246
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E + ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 247 VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 306
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 307 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 366
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 367 MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 426
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 427 LPALRSI 433
>UNIPROTKB|Q0VJ96 [details] [associations]
symbol:Rxra "Retinoic acid receptor RXR-alpha"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 HOVERGEN:HBG005606 EMBL:CH474001 GO:GO:0060528
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0055012
GO:GO:0044323 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 GO:GO:0070644 UniGene:Rn.108206 EMBL:AM295012
EMBL:AM295013 EMBL:AM392401 IPI:IPI00851118 RefSeq:NP_036937.2
SMR:Q0VJ96 STRING:Q0VJ96 Ensembl:ENSRNOT00000012892 GeneID:25271
KEGG:rno:25271 InParanoid:Q0VJ96 NextBio:605957
Genevestigator:Q0VJ96 Uniprot:Q0VJ96
Length = 467
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 201/307 (65%), Positives = 239/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 127 HPSGNMSSFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 186
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R+ NEVESTS +MPVE+ILEAE
Sbjct: 187 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELA 246
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E + ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 247 VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 306
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 307 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 366
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 367 MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 426
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 427 LPALRSI 433
>UNIPROTKB|F1NH64 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0004886 "9-cis retinoic acid
receptor activity" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0070644 "vitamin D response
element binding" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060687
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0044323
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD
GO:GO:0070644 EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026435
IPI:IPI00584474 Ensembl:ENSGALT00000004139 Uniprot:F1NH64
Length = 448
Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
Identities = 201/309 (65%), Positives = 238/309 (77%)
Query: 44 PYPPNHPLCG-SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P P+ + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+I
Sbjct: 106 PAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLI 165
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
D L MGMKREAVQEERQR K+R+ NEVESTS +MPVE+ILEAE
Sbjct: 166 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAE 225
Query: 163 QRVDMKQEP---ADQDIVNEQQ---ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVL 216
V+ K E A+ + TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+
Sbjct: 226 LAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVI 285
Query: 217 LLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE 276
LLRAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+
Sbjct: 286 LLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRD 345
Query: 277 MKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLL 336
M+MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + ++PGRFAKLL
Sbjct: 346 MQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLL 405
Query: 337 LRLPSLRSI 345
LRLP+LRSI
Sbjct: 406 LRLPALRSI 414
>MGI|MGI:98216 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IDA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98216 GO:GO:0005634
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
GO:GO:0032526 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:M84819 EMBL:X66225 EMBL:S62948
EMBL:BC058401 IPI:IPI00124345 PIR:B41727 PIR:S26670
RefSeq:NP_001153203.1 RefSeq:NP_033133.1 UniGene:Mm.3475
ProteinModelPortal:P28705 SMR:P28705 STRING:P28705
PhosphoSite:P28705 PRIDE:P28705 Ensembl:ENSMUST00000015987
Ensembl:ENSMUST00000111384 Ensembl:ENSMUST00000111386 GeneID:20183
KEGG:mmu:20183 UCSC:uc007dla.2 InParanoid:P28705 BindingDB:P28705
ChEMBL:CHEMBL4402 NextBio:297713 Bgee:P28705 CleanEx:MM_RXRG
Genevestigator:P28705 GermOnline:ENSMUSG00000015843 Uniprot:P28705
Length = 463
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 198/304 (65%), Positives = 233/304 (76%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++ER +E E S + +MPVERILEAE
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSSHEDMPVERILEAELA 245
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
V+ K E D ++ N TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRAG
Sbjct: 246 VEPKTESYGDMNVENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAG 305
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MDK
Sbjct: 306 WNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDK 365
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + E+PGRFAKLLLRLP+
Sbjct: 366 SELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPA 425
Query: 342 LRSI 345
LRSI
Sbjct: 426 LRSI 429
>UNIPROTKB|F1MX52 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060528 "secretory
columnal luminar epithelial cell differentiation involved in
prostate glandular acinus development" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044323
"retinoic acid-responsive element binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0060528 GeneTree:ENSGT00690000101777
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD GO:GO:0070644
EMBL:DAAA02032421 EMBL:DAAA02032422 EMBL:DAAA02032423
IPI:IPI00722888 Ensembl:ENSBTAT00000023729 Uniprot:F1MX52
Length = 474
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 199/307 (64%), Positives = 238/307 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
+P + +KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 134 HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK 193
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR K+R +EVES+S +MPVE+ILEAE
Sbjct: 194 RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRGESEVESSSSANEDMPVEKILEAELA 253
Query: 165 VDMKQEP-ADQDI-VNEQQ----ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
V+ K E + ++ +N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LL
Sbjct: 254 VEPKTETYVEANVGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL 313
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
RAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+
Sbjct: 314 RAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQ 373
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
MDKTELGCLR I+LFNPD +GL + VE LREKVY SLE Y + + E+PGRFAKLLLR
Sbjct: 374 MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR 433
Query: 339 LPSLRSI 345
LP+LRSI
Sbjct: 434 LPALRSI 440
>UNIPROTKB|Q0GFF6 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:DQ866834 EMBL:AY429474
RefSeq:NP_001123685.1 UniGene:Ssc.19608 ProteinModelPortal:Q0GFF6
SMR:Q0GFF6 STRING:Q0GFF6 Ensembl:ENSSSCT00000006936 GeneID:445465
KEGG:ssc:445465 Uniprot:Q0GFF6
Length = 463
Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
Identities = 198/304 (65%), Positives = 232/304 (76%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++ER +E E S +MPVERILEAE
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERILEAELA 245
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
V+ K E D ++ N TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRAG
Sbjct: 246 VEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAG 305
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MDK
Sbjct: 306 WNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDK 365
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + E+PGRFAKLLLRLP+
Sbjct: 366 SELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPA 425
Query: 342 LRSI 345
LRSI
Sbjct: 426 LRSI 429
>UNIPROTKB|P48443 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0031641 "regulation of myelination" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
EMBL:CH471067 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0032526
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0007519 HOVERGEN:HBG005606 EMBL:AL160058 DrugBank:DB00523
DrugBank:DB00926 DrugBank:DB00210 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:U38480 EMBL:CR456705
EMBL:BC012063 IPI:IPI00009736 RefSeq:NP_001243500.1
RefSeq:NP_008848.1 UniGene:Hs.26550 PDB:2GL8 PDBsum:2GL8
ProteinModelPortal:P48443 SMR:P48443 DIP:DIP-56220N IntAct:P48443
MINT:MINT-1378806 STRING:P48443 PhosphoSite:P48443 DMDM:1350913
PaxDb:P48443 PRIDE:P48443 DNASU:6258 Ensembl:ENST00000359842
GeneID:6258 KEGG:hsa:6258 UCSC:uc001gda.3 GeneCards:GC01M165370
HGNC:HGNC:10479 HPA:CAB002615 MIM:180247 neXtProt:NX_P48443
PharmGKB:PA34892 InParanoid:P48443 PhylomeDB:P48443
BindingDB:P48443 ChEMBL:CHEMBL2004 EvolutionaryTrace:P48443
GenomeRNAi:6258 NextBio:24303 ArrayExpress:P48443 Bgee:P48443
CleanEx:HS_RXRG Genevestigator:P48443 GermOnline:ENSG00000143171
Uniprot:P48443
Length = 463
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 200/305 (65%), Positives = 235/305 (77%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVE-STSGTLIEMPVERILEAEQ 163
L MGMKREAVQEERQR++ER +E E +TSG +MPVERILEAE
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHE-DMPVERILEAEL 244
Query: 164 RVDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRA 220
V+ K E D ++ N TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRA
Sbjct: 245 AVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRA 304
Query: 221 GWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMD 280
GWNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MD
Sbjct: 305 GWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMD 364
Query: 281 KTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLP 340
K+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + E+PGRFAKLLLRLP
Sbjct: 365 KSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLP 424
Query: 341 SLRSI 345
+LRSI
Sbjct: 425 ALRSI 429
>UNIPROTKB|Q0VC20 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K EMBL:BC120391
IPI:IPI00712482 RefSeq:NP_001068876.1 UniGene:Bt.11333
ProteinModelPortal:Q0VC20 SMR:Q0VC20 STRING:Q0VC20 PRIDE:Q0VC20
Ensembl:ENSBTAT00000022350 GeneID:509500 KEGG:bta:509500 CTD:6258
InParanoid:Q0VC20 KO:K08526 OMA:FMKFPTG NextBio:20868991
Uniprot:Q0VC20
Length = 463
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 197/304 (64%), Positives = 231/304 (75%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++ER +E E + +MPVERILEAE
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECANSGHEDMPVERILEAELA 245
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
V+ K E D + N TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRAG
Sbjct: 246 VEPKTESYGDMNTENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAG 305
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MDK
Sbjct: 306 WNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDK 365
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + E+PGRFAKLLLRLP+
Sbjct: 366 SELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPA 425
Query: 342 LRSI 345
LRSI
Sbjct: 426 LRSI 429
>RGD|620046 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0007422
"peripheral nervous system development" evidence=IEP] [GO:0007507
"heart development" evidence=IEP] [GO:0007519 "skeletal muscle
tissue development" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620046
GO:GO:0005634 GO:GO:0007507 GO:GO:0030182 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007422 GO:GO:0014070 GO:GO:0032526 GO:GO:0032870
GO:GO:0031641 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HSSP:P19793 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:BC091363 IPI:IPI00363863
RefSeq:NP_113953.1 UniGene:Rn.40816 ProteinModelPortal:Q5BJR8
SMR:Q5BJR8 STRING:Q5BJR8 PhosphoSite:Q5BJR8
Ensembl:ENSRNOT00000006117 GeneID:83574 KEGG:rno:83574
UCSC:RGD:620046 InParanoid:Q5BJR8 BindingDB:Q5BJR8
ChEMBL:CHEMBL4277 NextBio:616077 ArrayExpress:Q5BJR8
Genevestigator:Q5BJR8 Uniprot:Q5BJR8
Length = 463
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 197/304 (64%), Positives = 231/304 (75%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 126 YPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDK 185
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++ER +E E S +MPVERILEAE
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASTGHEDMPVERILEAELA 245
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
V+ K E D + + TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRAG
Sbjct: 246 VEPKTESYGDMSVESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAG 305
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MDK
Sbjct: 306 WNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMRMDK 365
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + E+PGRFAKLLLRLP+
Sbjct: 366 SELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPA 425
Query: 342 LRSI 345
LRSI
Sbjct: 426 LRSI 429
>UNIPROTKB|E2RD69 [details] [associations]
symbol:RXRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:AAEX03018391
RefSeq:XP_536146.2 ProteinModelPortal:E2RD69
Ensembl:ENSCAFT00000021179 GeneID:478989 KEGG:cfa:478989
NextBio:20854245 Uniprot:E2RD69
Length = 463
Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
Identities = 196/304 (64%), Positives = 232/304 (76%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YP P KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL Y CR+ ++C+ID
Sbjct: 126 YPSASPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDK 185
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQR 164
L MGMKREAVQEERQR++ER +E + + +MPVERILEAE
Sbjct: 186 RQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEADCANSGHEDMPVERILEAELA 245
Query: 165 VDMKQEP-ADQDIVNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
V+ K E D ++ N TNIC A DKQLF LV+WAK IPHF+ L LEDQV+LLRAG
Sbjct: 246 VEPKTESYGDMNLENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAG 305
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
WNELLIASFSHRS+SV+DGILLA G+ V+RSSAH AGVG IFDRVLTELVSKM++M+MDK
Sbjct: 306 WNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDK 365
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
+ELGCLR I+LFNPD +GL + VE LREKVY +LE YT+ + E+PGRFAKLLLRLP+
Sbjct: 366 SELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPA 425
Query: 342 LRSI 345
LRSI
Sbjct: 426 LRSI 429
>UNIPROTKB|F8VZR5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 EMBL:CR354565
HGNC:HGNC:10478 ChiTaRS:RXRB IPI:IPI01022583 SMR:F8VZR5
Ensembl:ENST00000546472 Ensembl:ENST00000548862
Ensembl:ENST00000549199 Ensembl:ENST00000552454
Ensembl:ENST00000552822 Uniprot:F8VZR5
Length = 389
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 195/305 (63%), Positives = 232/305 (76%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 53 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 111
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 112 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 170
Query: 164 RVDMKQEPADQDIVNEQQ---ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRA 220
V+ K + +++ TNIC+A DKQLF LV+WAK IPHF++LPL+DQV+LLRA
Sbjct: 171 AVEQKSDQGGSQHISKSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRA 230
Query: 221 GWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMD 280
GWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+MD
Sbjct: 231 GWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMD 290
Query: 281 KTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLP 340
KTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKLLLRLP
Sbjct: 291 KTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLP 350
Query: 341 SLRSI 345
+LRSI
Sbjct: 351 ALRSI 355
>UNIPROTKB|F8VNP5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478 ChiTaRS:RXRB
IPI:IPI01020693 SMR:F8VNP5 Ensembl:ENST00000546468
Ensembl:ENST00000547763 Ensembl:ENST00000549662
Ensembl:ENST00000550626 Ensembl:ENST00000550731 Uniprot:F8VNP5
Length = 392
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 196/308 (63%), Positives = 231/308 (75%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 53 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 111
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 112 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 170
Query: 164 RVDMKQE-----PADQDIVNEQQ-ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
V+ K + P + TNIC+A DKQLF LV+WAK IPHF++LPL+DQV+L
Sbjct: 171 AVEQKSDQGVEGPGGTGAPSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVIL 230
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
LRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M
Sbjct: 231 LRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDM 290
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLL 337
+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKLLL
Sbjct: 291 RMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLL 350
Query: 338 RLPSLRSI 345
RLP+LRSI
Sbjct: 351 RLPALRSI 358
>ZFIN|ZDB-GENE-040718-34 [details] [associations]
symbol:rxrgb "retinoid X receptor, gamma b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040718-34 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 InterPro:IPR021780 Pfam:PF11825
EMBL:BX296562 IPI:IPI00972012 Ensembl:ENSDART00000110950
Bgee:F1QDD2 Uniprot:F1QDD2
Length = 458
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 193/296 (65%), Positives = 229/296 (77%)
Query: 54 SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
SKH+C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y CR+ + C+ID
Sbjct: 129 SKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYC 188
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPAD 173
L MGMKREAVQEERQR KE+ EVE+TS +MPV++IL+AE V+ K E
Sbjct: 189 RYQKCLAMGMKREAVQEERQRGKEKSDTEVETTSRFNEDMPVDKILDAELSVEPKTETYT 248
Query: 174 QDIVNEQQ---ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ + TNIC A DKQLF LV+WAK IPHF+ LPL+DQV+LLRAGWNELLIASF
Sbjct: 249 ESSPSNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASF 308
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
SHRSI+VKDGILL G+ V+RSSAH AGVG IF+RVLTELVSKM++M+MDKTELGCLR I
Sbjct: 309 SHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAI 368
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGR-FAKLLLRLPSLRSI 345
+LFNPD +GL + VE LREKVY SLE YT+ + ++PGR FAKLLLRLP+LRSI
Sbjct: 369 VLFNPDAKGLSNSLEVEALREKVYASLETYTKQKYPDQPGRRFAKLLLRLPALRSI 424
>UNIPROTKB|A6H7I6 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 OMA:FLPERHA EMBL:DAAA02054891
EMBL:BC146260 IPI:IPI00709103 UniGene:Bt.57603 SMR:A6H7I6
STRING:A6H7I6 Ensembl:ENSBTAT00000000860 InParanoid:A6H7I6
Uniprot:A6H7I6
Length = 532
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 196/310 (63%), Positives = 230/310 (74%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 191 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 249
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 250 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 308
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 309 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 368
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 369 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 428
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKL 335
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKL
Sbjct: 429 DMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKL 488
Query: 336 LLRLPSLRSI 345
LLRLP+LRSI
Sbjct: 489 LLRLPALRSI 498
>UNIPROTKB|Q5TJF7 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AJ630366 HOVERGEN:HBG005606 HOGENOM:HOG000260821
InterPro:IPR021780 Pfam:PF11825 ProteinModelPortal:Q5TJF7
SMR:Q5TJF7 STRING:Q5TJF7 Uniprot:Q5TJF7
Length = 533
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 196/310 (63%), Positives = 230/310 (74%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 192 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 250
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 251 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 309
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 310 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 369
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 370 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 429
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKL 335
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKL
Sbjct: 430 DMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKL 489
Query: 336 LLRLPSLRSI 345
LLRLP+LRSI
Sbjct: 490 LLRLPALRSI 499
>UNIPROTKB|P28702 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IEA]
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0044212 GO:GO:0003713 GO:GO:0030375
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
EMBL:AL031228 GO:GO:0060038 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 HOVERGEN:HBG005606
DrugBank:DB00307 GO:GO:0055012 PDB:1UHL PDBsum:1UHL
DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 DrugBank:DB00799
HOGENOM:HOG000260821 OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525
EMBL:M84820 EMBL:X63522 EMBL:AF065396 EMBL:AF120161 EMBL:HQ709179
EMBL:AB209244 EMBL:CR354565 EMBL:BC001167 EMBL:X66424
IPI:IPI00426305 IPI:IPI00607575 PIR:S37781 RefSeq:NP_068811.1
UniGene:Hs.388034 PDB:1H9U PDBsum:1H9U ProteinModelPortal:P28702
SMR:P28702 IntAct:P28702 MINT:MINT-1365658 STRING:P28702
PhosphoSite:P28702 DMDM:1350911 PaxDb:P28702 PRIDE:P28702
DNASU:6257 Ensembl:ENST00000374680 Ensembl:ENST00000374685
Ensembl:ENST00000383217 Ensembl:ENST00000415157
Ensembl:ENST00000415909 Ensembl:ENST00000431820
Ensembl:ENST00000436753 GeneID:6257 KEGG:hsa:6257 UCSC:uc003odb.3
CTD:6257 GeneCards:GC06M033161 HGNC:HGNC:10478 HPA:CAB002003
MIM:180246 neXtProt:NX_P28702 PharmGKB:PA34891 PhylomeDB:P28702
BindingDB:P28702 ChEMBL:CHEMBL1870 ChiTaRS:RXRB
EvolutionaryTrace:P28702 GenomeRNAi:6257 NextBio:24299
ArrayExpress:P28702 Bgee:P28702 CleanEx:HS_RXRB
Genevestigator:P28702 GermOnline:ENSG00000204231 Uniprot:P28702
Length = 533
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 196/310 (63%), Positives = 230/310 (74%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 192 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 250
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 251 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 309
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 310 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 369
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 370 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 429
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKL 335
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKL
Sbjct: 430 DMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKL 489
Query: 336 LLRLPSLRSI 345
LLRLP+LRSI
Sbjct: 490 LLRLPALRSI 499
>UNIPROTKB|A5D9P3 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
EMBL:BX640585 RefSeq:NP_001177175.1 UniGene:Ssc.1598
ProteinModelPortal:A5D9P3 SMR:A5D9P3 STRING:A5D9P3
Ensembl:ENSSSCT00000036123 GeneID:100156801 KEGG:ssc:100156801
OMA:FLPERHA Uniprot:A5D9P3
Length = 532
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 196/310 (63%), Positives = 230/310 (74%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 191 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 249
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 250 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 308
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 309 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 368
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 369 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 428
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKL 335
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKL
Sbjct: 429 DMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKL 488
Query: 336 LLRLPSLRSI 345
LLRLP+LRSI
Sbjct: 489 LLRLPALRSI 498
>ZFIN|ZDB-GENE-990415-243 [details] [associations]
symbol:rxrab "retinoid x receptor, alpha b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISS;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-243 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 EMBL:U29894 IPI:IPI00481196 PIR:I50514
RefSeq:NP_571228.1 UniGene:Dr.624 ProteinModelPortal:Q90415
SMR:Q90415 STRING:Q90415 GeneID:793011 KEGG:dre:793011 CTD:793011
HOGENOM:HOG000260821 InParanoid:Q90415 OrthoDB:EOG4SJ5DV
NextBio:20931280 ArrayExpress:Q90415 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 Uniprot:Q90415
Length = 379
Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
Identities = 193/298 (64%), Positives = 229/298 (76%)
Query: 54 SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+KH+C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDL+Y CR+ ++C+ID
Sbjct: 50 TKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYC 109
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEP-A 172
L MGMKREAVQEERQR KER E + +MPVE+ILEAE V+ K E
Sbjct: 110 RYQKCLAMGMKREAVQEERQRAKERSEAEFGGCANE--DMPVEKILEAELAVEPKTETYV 167
Query: 173 DQDI---VNEQQ--ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ ++ N TNIC+A DKQLF LV+WAK IPHF+ LPL+DQV+LLRAGWNELLI
Sbjct: 168 EANLSPSANSPNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLI 227
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCL 287
ASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR+M+MDKTELGCL
Sbjct: 228 ASFSHRSIAVKDGILLATGLHVHRNSAHTAGVGAIFDRVLTELVSKMRDMQMDKTELGCL 287
Query: 288 RTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
R I+LFNPD +GL + VE LRE+VY SLE Y + + ++PGRFAKLLLRLP+LRSI
Sbjct: 288 RAIVLFNPDSKGLSNPSEVEALRERVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSI 345
>MGI|MGI:98215 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IGI] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IDA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IGI;IMP]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
[GO:0071300 "cellular response to retinoic acid" evidence=IDA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98215 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0001893
EMBL:AF100956 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:D21831
EMBL:BC049773 EMBL:M84818 EMBL:M26804 EMBL:X66224 IPI:IPI00226615
IPI:IPI00890271 PIR:A34418 PIR:D41727 PIR:I84718 PIR:S26669
RefSeq:NP_001192145.1 RefSeq:NP_035436.1 UniGene:Mm.1243
ProteinModelPortal:P28704 SMR:P28704 IntAct:P28704 STRING:P28704
PhosphoSite:P28704 PaxDb:P28704 PRIDE:P28704
Ensembl:ENSMUST00000116612 GeneID:20182 KEGG:mmu:20182
UCSC:uc008ixs.1 InParanoid:P28704 BindingDB:P28704
ChEMBL:CHEMBL4047 NextBio:297709 Bgee:P28704 CleanEx:MM_RXRB
Genevestigator:P28704 GermOnline:ENSMUSG00000039656 Uniprot:P28704
Length = 520
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 194/310 (62%), Positives = 230/310 (74%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 179 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 237
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + + G EMPV+RILEAE
Sbjct: 238 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-DGAGGAPEEMPVDRILEAEL 296
Query: 164 RVDMKQEPADQD--------IVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + + TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 297 AVEQKSDQGVEGPGATGGGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 356
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 357 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 416
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKL 335
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKL
Sbjct: 417 DMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKL 476
Query: 336 LLRLPSLRSI 345
LLRLP+LRSI
Sbjct: 477 LLRLPALRSI 486
>RGD|3611 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IDA] [GO:0031641 "regulation
of myelination" evidence=IDA] [GO:0042809 "vitamin D receptor
binding" evidence=IDA] [GO:0042974 "retinoic acid receptor binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0060038 "cardiac muscle cell proliferation"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0030375 GO:GO:0046982 GO:GO:0042974
GO:GO:0046966 GO:GO:0060038 GO:GO:0031641 HOVERGEN:HBG005606
GO:GO:0042809 GO:GO:0055012 OrthoDB:EOG4SJ5DV GO:GO:0004886
EMBL:M81766 IPI:IPI00394256 PIR:A41651 UniGene:Rn.49295
ProteinModelPortal:P49743 SMR:P49743 STRING:P49743 PhosphoSite:P49743
UCSC:RGD:3611 InParanoid:P49743 BindingDB:P49743 ChEMBL:CHEMBL2805
ArrayExpress:P49743 Genevestigator:P49743
GermOnline:ENSRNOG00000000464 Uniprot:P49743
Length = 458
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 194/310 (62%), Positives = 230/310 (74%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 117 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 175
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + + G EMPV+RILEAE
Sbjct: 176 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-DGAGGAPEEMPVDRILEAEL 234
Query: 164 RVDMKQEPADQD--------IVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + + TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 235 AVEQKSDQGVEGPGATGGGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 294
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 295 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 354
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKL 335
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKL
Sbjct: 355 DMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKL 414
Query: 336 LLRLPSLRSI 345
LLRLP+LRSI
Sbjct: 415 LLRLPALRSI 424
>UNIPROTKB|F1PUF6 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 OMA:FLPERHA EMBL:AAEX03008237
Ensembl:ENSCAFT00000001418 NextBio:20856477 Uniprot:F1PUF6
Length = 536
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 196/314 (62%), Positives = 230/314 (73%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 191 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 249
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 250 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 308
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 309 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 368
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDR----VLTELV 271
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDR VLTELV
Sbjct: 369 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELV 428
Query: 272 SKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGR 331
SKMR+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GR
Sbjct: 429 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 488
Query: 332 FAKLLLRLPSLRSI 345
FAKLLLRLP+LRSI
Sbjct: 489 FAKLLLRLPALRSI 502
>UNIPROTKB|A5D9P5 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CT737383 EMBL:BX640585
ProteinModelPortal:A5D9P5 SMR:A5D9P5 STRING:A5D9P5
Ensembl:ENSSSCT00000036293 Uniprot:A5D9P5
Length = 414
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 196/314 (62%), Positives = 230/314 (73%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 69 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 127
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 128 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 186
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 187 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 246
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDR----VLTELV 271
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDR VLTELV
Sbjct: 247 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELV 306
Query: 272 SKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGR 331
SKMR+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GR
Sbjct: 307 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 366
Query: 332 FAKLLLRLPSLRSI 345
FAKLLLRLP+LRSI
Sbjct: 367 FAKLLLRLPALRSI 380
>UNIPROTKB|F1M9P1 [details] [associations]
symbol:Rxrb "Retinoic acid receptor RXR-beta" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 IPI:IPI00394256 OMA:FLPERHA
Ensembl:ENSRNOT00000041613 ArrayExpress:F1M9P1 Uniprot:F1M9P1
Length = 522
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 195/314 (62%), Positives = 230/314 (73%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 177 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 235
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + + G EMPV+RILEAE
Sbjct: 236 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-DGAGGAPEEMPVDRILEAEL 294
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 295 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 354
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDR----VLTELV 271
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDR VLTELV
Sbjct: 355 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELV 414
Query: 272 SKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGR 331
SKMR+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GR
Sbjct: 415 SKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGR 474
Query: 332 FAKLLLRLPSLRSI 345
FAKLLLRLP+LRSI
Sbjct: 475 FAKLLLRLPALRSI 488
>ZFIN|ZDB-GENE-980526-436 [details] [associations]
symbol:rxrba "retinoid x receptor, beta a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483
IPI:IPI00758810 PIR:I50517 RefSeq:NP_571350.1 UniGene:Dr.351
ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:Q7SYN5
Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530
KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525
NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5
Length = 471
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 201/322 (62%), Positives = 231/322 (71%)
Query: 50 PLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXX 109
P+ K LC+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDLSY CR+ ++C++D
Sbjct: 117 PMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNR 176
Query: 110 XXXXXXXXXLNMGMKRE--------AVQEERQRTKERDSNEVESTSGTLIEMPVERILEA 161
L MGMKRE +VQEERQR KERD EVES+S EMPVE+ILEA
Sbjct: 177 CQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKERDG-EVESSSAANEEMPVEKILEA 235
Query: 162 EQRVDMKQE-PADQDIVNEQQ---ATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
E V+ K E AD TNIC+A DKQLF LV+WAK IPHF+ L L+DQV+L
Sbjct: 236 EMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQVIL 295
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDR------------ 265
LRAGWNELLIASFSHRSI+VKDGILLA G+ V+R+SAH AGVG IFDR
Sbjct: 296 LRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIF 355
Query: 266 --VLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRV 323
VLTELVSKMR+M+MDKTELGCLR IILFNPD +GL S VE+LREKVY SLE Y +
Sbjct: 356 DRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEAYCKQ 415
Query: 324 NHSEEPGRFAKLLLRLPSLRSI 345
+ ++ GRFAKLLLRLP+LRSI
Sbjct: 416 RYPDQQGRFAKLLLRLPALRSI 437
>UNIPROTKB|E9PK95 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478
ChiTaRS:RXRB IPI:IPI00984407 SMR:E9PK95 Ensembl:ENST00000531100
Ensembl:ENST00000544186 Ensembl:ENST00000546880
Ensembl:ENST00000549889 Ensembl:ENST00000552670
Ensembl:ENST00000553072 UCSC:uc011dqr.2 Uniprot:E9PK95
Length = 347
Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
Identities = 191/303 (63%), Positives = 225/303 (74%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 12 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCR 71
Query: 115 XXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQE---- 170
L GMKREAVQEERQR K++D + E G EMPV+RILEAE V+ K +
Sbjct: 72 YQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAELAVEQKSDQGVE 130
Query: 171 -PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELL 226
P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV+LLRAGWNELL
Sbjct: 131 GPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELL 190
Query: 227 IASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDR----VLTELVSKMREMKMDKT 282
IASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDR VLTELVSKMR+M+MDKT
Sbjct: 191 IASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKT 250
Query: 283 ELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSL 342
ELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GRFAKLLLRLP+L
Sbjct: 251 ELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPAL 310
Query: 343 RSI 345
RSI
Sbjct: 311 RSI 313
>ZFIN|ZDB-GENE-990415-242 [details] [associations]
symbol:rxrbb "retinoid x receptor, beta b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-242 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:U29941 IPI:IPI00480966 PIR:I50516 RefSeq:NP_571313.1
UniGene:Dr.350 ProteinModelPortal:Q90417 SMR:Q90417 GeneID:30486
KEGG:dre:30486 CTD:30486 NextBio:20806878 ArrayExpress:Q90417
Uniprot:Q90417
Length = 422
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 187/311 (60%), Positives = 224/311 (72%)
Query: 50 PLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXX 109
P+ K +C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRKDLSY CR+ + C++D
Sbjct: 82 PMLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNR 141
Query: 110 XXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQ 169
L MGMKREAVQEERQ+ KERD + E +S EMPVE+ILEAE V+ +
Sbjct: 142 CQYCRYQKCLAMGMKREAVQEERQKNKERDG-DYECSSSANEEMPVEKILEAETAVEHRT 200
Query: 170 E-PADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIA 228
+ +D TNIC+A DKQLF LV+WAK +PHF+ +PL+DQV+LLRAGWNELLIA
Sbjct: 201 DLHSDATGSPNDPVTNICQAADKQLFTLVEWAKRVPHFSDVPLDDQVILLRAGWNELLIA 260
Query: 229 SFSHRSISVKDGILLAPGVTVY--------------RSSAHEAGVGGIFDRVLTELVSKM 274
+FSHRSISVKD ILLA G+ V R S+H A VG +FDRVLTELV KM
Sbjct: 261 AFSHRSISVKDEILLATGLHVPKESTHNLGVEAFFDRESSHSAEVGALFDRVLTELVCKM 320
Query: 275 REMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAK 334
R+M+MDKTELGCLR I+LFNPD +GL S VE+LREKVY SLE Y + + ++ GRFAK
Sbjct: 321 RDMQMDKTELGCLRAIVLFNPDAKGLTSSSEVELLREKVYASLESYCKQKYPDQQGRFAK 380
Query: 335 LLLRLPSLRSI 345
LLLRLP+LRSI
Sbjct: 381 LLLRLPALRSI 391
>UNIPROTKB|K7GQM0 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00690000101777
EMBL:CT737383 Ensembl:ENSSSCT00000035096 Uniprot:K7GQM0
Length = 388
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 183/296 (61%), Positives = 216/296 (72%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 95 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 153
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 154 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 212
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 213 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 272
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 273 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 332
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGR 331
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GR
Sbjct: 333 DMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 388
>UNIPROTKB|Q0GFF5 [details] [associations]
symbol:RXRbeta "Retinoid X receptor beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
RefSeq:NP_001177175.1 UniGene:Ssc.1598 GeneID:100156801
KEGG:ssc:100156801 EMBL:DQ866835 SMR:Q0GFF5 STRING:Q0GFF5
Ensembl:ENSSSCT00000001642 Uniprot:Q0GFF5
Length = 484
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 183/296 (61%), Positives = 216/296 (72%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 191 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 249
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 250 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 308
Query: 164 RVDMKQE-----PAD---QDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQV 215
V+ K + P TNIC+A DKQLF LV+WAK IPHF++LPL+DQV
Sbjct: 309 AVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQV 368
Query: 216 LLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMR 275
+LLRAGWNELLIASFSHRSI V+DGILLA G+ V+R+SAH AGVG IFDRVLTELVSKMR
Sbjct: 369 ILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMR 428
Query: 276 EMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGR 331
+M+MDKTELGCLR IILFNPD +GL + VE+LREKVY SLE Y + + E+ GR
Sbjct: 429 DMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGR 484
>FB|FBgn0003964 [details] [associations]
symbol:usp "ultraspiracle" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0004884 "ecdysteroid hormone receptor activity"
evidence=NAS;IDA;IPI] [GO:0008232 "activator ecdysone receptor
complex" evidence=IDA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA;IPI] [GO:0008230
"ecdysone receptor holocomplex" evidence=TAS;IPI] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=IDA;NAS]
[GO:0007552 "metamorphosis" evidence=NAS] [GO:0045596 "negative
regulation of cell differentiation" evidence=TAS] [GO:0005700
"polytene chromosome" evidence=NAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0035072
"ecdysone-mediated induction of salivary gland cell autophagic cell
death" evidence=NAS] [GO:0008289 "lipid binding" evidence=IDA]
[GO:0040034 "regulation of development, heterochronic"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005500 "juvenile hormone binding" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;NAS] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0030425
"dendrite" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0035075 "response to ecdysone" evidence=IMP]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045892 GO:GO:0045893 GO:GO:0042803
GO:GO:0046872 GO:GO:0030425 EMBL:AE014298 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0016322 GO:GO:0007298 GO:GO:0048813
GO:GO:0007517 EMBL:AL031765 GO:GO:0007281 GO:GO:0046982
GO:GO:0040034 GO:GO:0005700 GO:GO:0035072 PDB:1R0O PDB:2HAN
PDBsum:1R0O PDBsum:2HAN GO:GO:0004884 GO:GO:0045596
GeneTree:ENSGT00690000101777 EMBL:X53417 EMBL:X52591 EMBL:AY069393
EMBL:X53379 PIR:A35872 PIR:T13737 RefSeq:NP_476781.1 UniGene:Dm.25
PDB:1HG4 PDBsum:1HG4 ProteinModelPortal:P20153 SMR:P20153
DIP:DIP-645N IntAct:P20153 MINT:MINT-824030 STRING:P20153
PaxDb:P20153 PRIDE:P20153 EnsemblMetazoa:FBtr0070346
EnsemblMetazoa:FBtr0333803 GeneID:31165 KEGG:dme:Dmel_CG4380
CTD:31165 FlyBase:FBgn0003964 InParanoid:P20153 KO:K14030
OMA:MGDSRDS OrthoDB:EOG45HQD3 PhylomeDB:P20153
EvolutionaryTrace:P20153 GenomeRNAi:31165 NextBio:772247
Bgee:P20153 GermOnline:CG4380 GO:GO:0008230 GO:GO:0005500
Uniprot:P20153
Length = 508
Score = 380 (138.8 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
Identities = 71/104 (68%), Positives = 76/104 (73%)
Query: 45 YPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDX 104
YPPNHPL GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDL+YACRE RNCIID
Sbjct: 91 YPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRENRNCIIDK 150
Query: 105 XXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG 148
L GMKREAVQEERQR + + ++ G
Sbjct: 151 RQRNRCQYCRYQKCLTCGMKREAVQEERQRGARNAAGRLSASGG 194
Score = 305 (112.4 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
Identities = 60/120 (50%), Positives = 86/120 (71%)
Query: 229 SFSHRSISVK-DGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCL 287
SF RS ++ + L + +R+SA +AGV IFDR+L+EL KM+ + +D+ EL CL
Sbjct: 351 SFERRSPGLQPQQLFLNQSFSYHRNSAIKAGVSAIFDRILSELSVKMKRLNLDRRELSCL 410
Query: 288 RTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSIEV 347
+ IIL+NPD+RG+KS+ +EM REKVY L+E+ R+ H + GRFA+LLLRLP+LRSI +
Sbjct: 411 KAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLEHPGDDGRFAQLLLRLPALRSISL 470
Score = 168 (64.2 bits), Expect = 7.3e-82, Sum P(3) = 7.3e-82
Identities = 41/107 (38%), Positives = 66/107 (61%)
Query: 146 TSGTLIEMPVERILEAEQRVD----------MKQEPADQDIVNEQQATN-ICKATDKQLF 194
T+ + +ERI+EAEQR + ++ P + + A + +C+ +KQLF
Sbjct: 231 TNSVSRDFSIERIIEAEQRAETQCGDRALTFLRVGPYSTVQPDYKGAVSALCQVVNKQLF 290
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSI-SVKDG 240
Q+V++A+ +PHF +PL+DQV+LL+A W ELLIA+ + SI S+ DG
Sbjct: 291 QMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSIVSLDDG 337
>MGI|MGI:1353604 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] Reactome:REACT_13641
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1353604 GO:GO:0005829 GO:GO:0045893
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018
HOVERGEN:HBG005606 eggNOG:NOG241134 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 CTD:3174 KO:K08037 OrthoDB:EOG4G4GQH
EMBL:AJ242626 IPI:IPI00322956 RefSeq:NP_038948.1 UniGene:Mm.330897
ProteinModelPortal:Q9WUU6 SMR:Q9WUU6 STRING:Q9WUU6
PhosphoSite:Q9WUU6 PRIDE:Q9WUU6 Ensembl:ENSMUST00000108393
GeneID:30942 KEGG:mmu:30942 InParanoid:Q9WUU6 NextBio:307386
Bgee:Q9WUU6 CleanEx:MM_HNF4G Genevestigator:Q9WUU6
GermOnline:ENSMUSG00000017688 Uniprot:Q9WUU6
Length = 408
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 114/293 (38%), Positives = 165/293 (56%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R++RK Y+CR R C++D
Sbjct: 7 GVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRY 66
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S S ++ + + + V
Sbjct: 67 CRLRKCFRAGMKKEAVQNERDRISTRRSTYEGSNIPSINTLAQAEVRSCQISVPSPSSST 126
Query: 173 DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSH 232
D +I +++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+ +
Sbjct: 127 DINIKKIASISDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATK 186
Query: 233 RSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIIL 292
RS+ KD +LL ++R+S E V + +RVL ELV +E+++D E CL+ I+
Sbjct: 187 RSMMYKDILLLGNHYVIHRNSC-EVEVSRVANRVLDELVRPFQEIQIDDNEYACLKAIVF 245
Query: 293 FNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
F+PD +GL ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 246 FDPDAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSI 298
>UNIPROTKB|F1MGG2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:DAAA02038880 IPI:IPI00694519 UniGene:Bt.16536
Ensembl:ENSBTAT00000010892 ArrayExpress:F1MGG2 Uniprot:F1MGG2
Length = 425
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 113/293 (38%), Positives = 165/293 (56%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R++RK Y+CR R C++D
Sbjct: 24 GVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRY 83
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S S ++ + + + V A
Sbjct: 84 CRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGASA 143
Query: 173 DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSH 232
D ++ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+ +
Sbjct: 144 DINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATK 203
Query: 233 RSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIIL 292
RS+ KD +LL ++R+S E + + +RVL ELV +E+++D E CL+ I+
Sbjct: 204 RSMMYKDILLLGNNYVIHRNSC-EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVF 262
Query: 293 FNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
F+PD +GL ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 263 FDPDAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSI 315
>UNIPROTKB|F1N2D7 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:DAAA02038880
IPI:IPI00904047 Ensembl:ENSBTAT00000052638 ArrayExpress:F1N2D7
Uniprot:F1N2D7
Length = 408
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 113/293 (38%), Positives = 165/293 (56%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R++RK Y+CR R C++D
Sbjct: 7 GVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRY 66
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S S ++ + + + V A
Sbjct: 67 CRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGASA 126
Query: 173 DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSH 232
D ++ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+ +
Sbjct: 127 DINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATK 186
Query: 233 RSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIIL 292
RS+ KD +LL ++R+S E + + +RVL ELV +E+++D E CL+ I+
Sbjct: 187 RSMMYKDILLLGNNYVIHRNSC-EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVF 245
Query: 293 FNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
F+PD +GL ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 246 FDPDAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSI 298
>UNIPROTKB|E2R9K8 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:AAEX03015880 Ensembl:ENSCAFT00000013166 Uniprot:E2R9K8
Length = 462
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 115/295 (38%), Positives = 173/295 (58%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R++RK Y+CR R C++D
Sbjct: 61 GVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRY 120
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S + ++ I + + + Q + + A
Sbjct: 121 CRLRKCFRAGMKKEAVQNERDRISTRRST-FDGSNIPSINTLAQAEIRSRQ-ISVSSPGA 178
Query: 173 DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
DI ++ A+ ++C++ +QL LV+WAK+IP F+ LPL+DQV LLRA E L+
Sbjct: 179 STDINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFSELPLDDQVALLRAHAGEHLLLGA 238
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL ++R+S+ E + + +RVL ELV +E+++D E CL+ I
Sbjct: 239 TKRSMVYKDILLLGNNYVIHRNSS-EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAI 297
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ F+PD +GL ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 298 VFFDPDAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSI 352
>UNIPROTKB|E1C7C2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 OMA:ANYSEVL EMBL:AADN02024674
IPI:IPI00583810 ProteinModelPortal:E1C7C2
Ensembl:ENSGALT00000025271 Uniprot:E1C7C2
Length = 454
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 113/295 (38%), Positives = 172/295 (58%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R++RK+ Y CR R C++D
Sbjct: 54 GISSLCAICGDRATGKHYGASSCDGCKGFFRRSIRKNHVYTCRFSRQCVVDKDKRNQCRY 113
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R N + + I + + +++ + A
Sbjct: 114 CRLKKCFRAGMKKEAVQNERDRISTR-RNTFDGCNIPSIST-LSQAEALSRQISVSSPGA 171
Query: 173 DQDIVNEQQA--TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
DI ++ A +++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 172 STDINAKKIAGISDVCESMKQQLLVLVEWAKYIPGFCELPLDDQVALLRAHAGEHLLLGA 231
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS++ KD +LL ++R+S E + + +R+L ELV +E+++D E CL+ I
Sbjct: 232 AKRSMAYKDILLLGNNYIIHRNST-EVEISRVANRILDELVRPFQEIQIDDNEYACLKAI 290
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ F+PD +GL + ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 291 VFFDPDAKGLSNPVKIKNMRYQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSI 345
>UNIPROTKB|Q7YRQ5 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20153 EMBL:DAAA02036724 EMBL:AY318752 IPI:IPI00691213
RefSeq:NP_001015557.1 UniGene:Bt.107136 SMR:Q7YRQ5 STRING:Q7YRQ5
Ensembl:ENSBTAT00000016078 GeneID:509200 KEGG:bta:509200
InParanoid:Q7YRQ5 NextBio:20868867 Uniprot:Q7YRQ5
Length = 455
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 117/295 (39%), Positives = 170/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 46 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 105
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 106 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPVSGI 163
Query: 173 DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A+ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 164 NGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGA 223
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E CL+ I
Sbjct: 224 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSVRILDELVLPFQELQIDDNEYACLKAI 283
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 284 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 338
>UNIPROTKB|E2R9S0 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:AAEX03013956
RefSeq:XP_852731.1 ProteinModelPortal:E2R9S0
Ensembl:ENSCAFT00000014977 GeneID:485884 KEGG:cfa:485884
NextBio:20859787 Uniprot:E2R9S0
Length = 474
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 117/295 (39%), Positives = 170/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 55 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 114
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 115 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPVSGI 172
Query: 173 DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A+ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 173 NGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGA 232
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E CL+ I
Sbjct: 233 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSMRILDELVLPFQELQIDDNEYACLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 293 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 347
>UNIPROTKB|Q1I181 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:CU062400
EMBL:DQ061106 RefSeq:NP_001038036.1 UniGene:Ssc.19208 SMR:Q1I181
STRING:Q1I181 Ensembl:ENSSSCT00000008067 GeneID:733636
KEGG:ssc:733636 Uniprot:Q1I181
Length = 474
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 116/295 (39%), Positives = 170/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 55 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 114
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 115 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPVSGI 172
Query: 173 DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A+ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 173 NGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGA 232
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL + R A + + R+L ELV +E+++D E CL+ I
Sbjct: 233 TKRSMVFKDVLLLGNDYIIPRHCPELAEMNRVSVRILDELVLPFQELQVDDNEYACLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 293 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 347
>UNIPROTKB|Q14541 [details] [associations]
symbol:HNF4G "Hepatocyte nuclear factor 4-gamma"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0030522
GO:GO:0031018 GO:GO:0006367 HOVERGEN:HBG005606 eggNOG:NOG241134
HOGENOM:HOG000260822 EMBL:Z49826 EMBL:BX571750 EMBL:AF133504
EMBL:AF133496 EMBL:AF133497 EMBL:AF133498 EMBL:AF133499
EMBL:AF133500 EMBL:AF133501 EMBL:AF133502 EMBL:AF133503
EMBL:AF207953 EMBL:BC105009 EMBL:BC105011 IPI:IPI00291564
IPI:IPI00852837 PIR:JC6095 RefSeq:NP_004124.4 UniGene:Hs.241529
PDB:1LV2 PDBsum:1LV2 ProteinModelPortal:Q14541 SMR:Q14541
STRING:Q14541 PhosphoSite:Q14541 DMDM:160110004 PaxDb:Q14541
PRIDE:Q14541 DNASU:3174 Ensembl:ENST00000354370
Ensembl:ENST00000396423 GeneID:3174 KEGG:hsa:3174 UCSC:uc003yaq.3
CTD:3174 GeneCards:GC08P076370 H-InvDB:HIX0007597 HGNC:HGNC:5026
HPA:HPA005438 MIM:605966 neXtProt:NX_Q14541 PharmGKB:PA29351
InParanoid:Q14541 KO:K08037 OMA:ANYSEVL OrthoDB:EOG4G4GQH
ChEMBL:CHEMBL1961786 ChiTaRS:HNF4G EvolutionaryTrace:Q14541
GenomeRNAi:3174 NextBio:12594 ArrayExpress:Q14541 Bgee:Q14541
CleanEx:HS_HNF4G Genevestigator:Q14541 GermOnline:ENSG00000164749
Uniprot:Q14541
Length = 408
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 111/293 (37%), Positives = 163/293 (55%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R++RK Y+CR R C++D
Sbjct: 7 GVNCLCAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVVDKDKRNQCRY 66
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S S ++ + + + V
Sbjct: 67 CRLRKCFRAGMKKEAVQNERDRISTRRSTFDGSNIPSINTLAQAEVRSRQISVSSPGSST 126
Query: 173 DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSH 232
D ++ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+ +
Sbjct: 127 DINVKKIASIGDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATK 186
Query: 233 RSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIIL 292
RS+ KD +LL ++R+S E + + +RVL ELV +E+++D E CL+ I+
Sbjct: 187 RSMMYKDILLLGNNYVIHRNSC-EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVF 245
Query: 293 FNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
F+PD +GL ++ +R +V LE+Y + GRF +LLL LP+L+SI
Sbjct: 246 FDPDAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSI 298
>UNIPROTKB|F1NZ15 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005504 "fatty
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006591 "ornithine
metabolic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0007548 "sex differentiation" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0019216 "regulation
of lipid metabolic process" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0055091
"phospholipid homeostasis" evidence=IEA] [GO:0060395 "SMAD protein
signal transduction" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0030308 GO:GO:0046872
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 GeneTree:ENSGT00690000101777
OMA:PAFCDLP EMBL:AADN02019318 IPI:IPI00574089
Ensembl:ENSGALT00000006810 ArrayExpress:F1NZ15 Uniprot:F1NZ15
Length = 455
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 119/299 (39%), Positives = 169/299 (56%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 46 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCVVDKDKRNQCRY 105
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMP-VERILEAEQRVDMKQEP 171
GMK+EAVQ ER R R S+ +S+ +P + +L+AE P
Sbjct: 106 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSS------LPSINVLLQAEVLAQQISSP 159
Query: 172 A---DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELL 226
+ DI ++ A ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L
Sbjct: 160 VLVMNGDIRGKKIANIADVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHL 219
Query: 227 IASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGC 286
+ + RS+ KD +LL V R+ V + R+L ELV +E+++D E C
Sbjct: 220 LLGVAKRSMVFKDVLLLGNDHIVPRNCPELVEVSRVAIRILDELVLPFQELQIDDNEYAC 279
Query: 287 LRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
L+ II F+PD +GL ++ +R +V SLE+Y + GRF +LLL LP L+SI
Sbjct: 280 LKAIIFFDPDAKGLSDPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPVLQSI 338
>MGI|MGI:109128 [details] [associations]
symbol:Hnf4a "hepatic nuclear factor 4, alpha" species:10090
"Mus musculus" [GO:0000062 "fatty-acyl-CoA binding" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006591 "ornithine metabolic process"
evidence=ISO] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0006637 "acyl-CoA metabolic process" evidence=ISO] [GO:0006805
"xenobiotic metabolic process" evidence=ISO] [GO:0007164
"establishment of tissue polarity" evidence=ISO] [GO:0007548 "sex
differentiation" evidence=IMP] [GO:0007596 "blood coagulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO;IMP] [GO:0010470 "regulation of gastrulation"
evidence=IMP] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=ISO] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0032534 "regulation
of microvillus assembly" evidence=ISO] [GO:0033159 "negative
regulation of protein import into nucleus, translocation"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO;IDA] [GO:0045216 "cell-cell
junction organization" evidence=ISO] [GO:0045722 "positive
regulation of gluconeogenesis" evidence=ISO] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050796 "regulation of insulin
secretion" evidence=IMP] [GO:0055088 "lipid homeostasis"
evidence=ISO] [GO:0055091 "phospholipid homeostasis" evidence=IMP]
[GO:0060395 "SMAD protein signal transduction" evidence=IDA]
[GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IMP]
Reactome:REACT_13641 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:109128 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0006629 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
GO:GO:0050796 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0044212 Reactome:REACT_127416 GO:GO:0000062 GO:GO:0006637
GO:GO:0016290 GO:GO:2000189 GO:GO:0005504 GO:GO:0070328
GO:GO:0006805 GO:GO:0006591 GO:GO:0043433 GO:GO:0030522
GO:GO:0031018 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 HOVERGEN:HBG005606 EMBL:AL591488 GO:GO:0010470
GO:GO:0033159 CTD:3172 eggNOG:NOG241134 KO:K07292 GO:GO:0007164
GO:GO:0032534 EMBL:D29015 EMBL:AY902317 EMBL:AK143948 EMBL:BC039220
EMBL:EF193393 IPI:IPI00230333 IPI:IPI00321964 PIR:S52074
RefSeq:NP_032287.2 UniGene:Mm.202383 ProteinModelPortal:P49698
SMR:P49698 IntAct:P49698 STRING:P49698 PhosphoSite:P49698
PaxDb:P49698 PRIDE:P49698 Ensembl:ENSMUST00000018094
Ensembl:ENSMUST00000109411 GeneID:15378 KEGG:mmu:15378
UCSC:uc008nta.2 UCSC:uc008ntb.1 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 InParanoid:P49698 OMA:PAFCDLP ChiTaRS:HNF4A
NextBio:288038 Bgee:P49698 CleanEx:MM_HNF4A Genevestigator:P49698
GermOnline:ENSMUSG00000017950 Uniprot:P49698
Length = 474
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 117/295 (39%), Positives = 169/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 55 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 114
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 115 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPISGI 172
Query: 173 DQDIVNEQQA--TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A T++C++ +QL LV+WAK+IP F L L+DQV LLRA E L+
Sbjct: 173 NGDIRAKKIANITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGA 232
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E CL+ I
Sbjct: 233 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 293 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 347
>RGD|2810 [details] [associations]
symbol:Hnf4a "hepatocyte nuclear factor 4, alpha" species:10116
"Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO;IPI] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006591 "ornithine
metabolic process" evidence=ISO] [GO:0006629 "lipid metabolic
process" evidence=ISO] [GO:0006637 "acyl-CoA metabolic process"
evidence=IDA] [GO:0006805 "xenobiotic metabolic process"
evidence=ISO] [GO:0007164 "establishment of tissue polarity"
evidence=IDA] [GO:0007548 "sex differentiation" evidence=ISO]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;IDA] [GO:0009749 "response to glucose
stimulus" evidence=ISO;IDA] [GO:0010470 "regulation of gastrulation"
evidence=ISO] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in regulation
of gene expression" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0032534 "regulation of microvillus assembly"
evidence=IMP] [GO:0033159 "negative regulation of protein import into
nucleus, translocation" evidence=IDA] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045216 "cell-cell junction organization"
evidence=IDA] [GO:0045722 "positive regulation of gluconeogenesis"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0050732 "negative regulation of
peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050796
"regulation of insulin secretion" evidence=ISO] [GO:0051591 "response
to cAMP" evidence=IEP] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055091 "phospholipid homeostasis" evidence=ISO] [GO:0060395
"SMAD protein signal transduction" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=ISO] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2810
GO:GO:0005737 GO:GO:0008285 GO:GO:0042803 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629 GO:GO:0045722
GO:GO:0042593 GO:GO:0055091 GO:GO:0050796 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0000062 GO:GO:0006637 GO:GO:0016290
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524 GO:GO:0045216
HOVERGEN:HBG005606 GO:GO:0010470 GO:GO:0033159 CTD:3172
eggNOG:NOG241134 KO:K07292 GO:GO:0007164 GO:GO:0032534
HOGENOM:HOG000260822 EMBL:D10554 EMBL:X57133 EMBL:EF193392
IPI:IPI00207142 IPI:IPI00231412 PIR:A36471 PIR:S23502
RefSeq:NP_071516.2 UniGene:Rn.12238 PDB:1M7W PDBsum:1M7W
ProteinModelPortal:P22449 SMR:P22449 IntAct:P22449 STRING:P22449
PhosphoSite:P22449 GeneID:25735 KEGG:rno:25735 InParanoid:P22449
EvolutionaryTrace:P22449 NextBio:607871 ArrayExpress:P22449
Genevestigator:P22449 GermOnline:ENSRNOG00000008895 Uniprot:P22449
Length = 474
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 117/295 (39%), Positives = 169/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 55 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 114
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 115 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPISGI 172
Query: 173 DQDIVNEQQA--TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A T++C++ +QL LV+WAK+IP F L L+DQV LLRA E L+
Sbjct: 173 NGDIRAKKIANITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGA 232
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E CL+ I
Sbjct: 233 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 293 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 347
>UNIPROTKB|E9PSV4 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
IPI:IPI01007598 Ensembl:ENSRNOT00000067429 ArrayExpress:E9PSV4
Uniprot:E9PSV4
Length = 351
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 117/295 (39%), Positives = 169/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 30 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 89
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 90 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPISGI 147
Query: 173 DQDIVNEQQA--TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A T++C++ +QL LV+WAK+IP F L L+DQV LLRA E L+
Sbjct: 148 NGDIRAKRIANITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGA 207
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E CL+ I
Sbjct: 208 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAI 267
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 268 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 322
>UNIPROTKB|G3V750 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4, alpha, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005504 "fatty acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006591 "ornithine metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0009749 "response to glucose
stimulus" evidence=IEA] [GO:0010470 "regulation of gastrulation"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0055091 "phospholipid homeostasis" evidence=IEA] [GO:0060395
"SMAD protein signal transduction" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:CH474005
CTD:3172 KO:K07292 GeneTree:ENSGT00690000101777 RefSeq:NP_071516.2
UniGene:Rn.12238 GeneID:25735 KEGG:rno:25735
Ensembl:ENSRNOT00000011978 Uniprot:G3V750
Length = 474
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 117/295 (39%), Positives = 169/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 55 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 114
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L Q++
Sbjct: 115 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--QQITSPISGI 172
Query: 173 DQDIVNEQQA--TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A T++C++ +QL LV+WAK+IP F L L+DQV LLRA E L+
Sbjct: 173 NGDIRAKRIANITDVCESMKEQLLVLVEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGA 232
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E CL+ I
Sbjct: 233 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 293 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 347
>FB|FBgn0004914 [details] [associations]
symbol:Hnf4 "Hepatocyte nuclear factor 4" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0007492 "endoderm development"
evidence=NAS] [GO:0008610 "lipid biosynthetic process"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016042 "lipid catabolic process" evidence=IDA]
[GO:0034440 "lipid oxidation" evidence=IDA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
EMBL:AE014134 GO:GO:0016042 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 EMBL:U70874 PIR:S36218
RefSeq:NP_723414.1 UniGene:Dm.4524 ProteinModelPortal:P49866
SMR:P49866 MINT:MINT-1331960 STRING:P49866 PaxDb:P49866
EnsemblMetazoa:FBtr0079749 GeneID:44544 KEGG:dme:Dmel_CG9310
CTD:44544 FlyBase:FBgn0004914 InParanoid:P49866 KO:K08704
OrthoDB:EOG4Z08MV GenomeRNAi:44544 NextBio:837399 Bgee:P49866
GermOnline:CG9310 GO:GO:0034440 Uniprot:P49866
Length = 666
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 115/303 (37%), Positives = 175/303 (57%)
Query: 54 SKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
S +C+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y CR RNC++D
Sbjct: 100 SPTVCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHQYTCRFARNCVVDKDKRNQCRYC 159
Query: 114 XXXXXLNMGMKREAVQEERQRTK-ERDSNE-VESTSGTLIEMPVERILEAEQ-RVDMKQE 170
GMK+EAVQ ER R R SN+ + +G + V+ E+ Q + E
Sbjct: 160 RLRKCFKAGMKKEAVQNERDRISCRRTSNDDPDPGNGLSVISLVKAENESRQSKAGAAME 219
Query: 171 P-ADQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
P ++D+ N+Q A+ ++C++ +QL LV+WAK IP F L L+DQV LLRA E L+
Sbjct: 220 PNINEDLSNKQFASINDVCESMKQQLLTLVEWAKQIPAFNELQLDDQVALLRAHAGEHLL 279
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSS-----AHEAGVGGIFDRVLTELVSKMREMKMDKT 282
S RS+ +KD +LL+ + R + + I R++ ELV+ M+++ +D T
Sbjct: 280 LGLSRRSMHLKDVLLLSNNCVITRHCPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDT 339
Query: 283 ELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSL 342
E C++ ++ F+P+ +GL ++ LR ++ +LE+Y E GRF ++LL LP L
Sbjct: 340 EFACIKALVFFDPNAKGLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILPVL 399
Query: 343 RSI 345
+SI
Sbjct: 400 QSI 402
>ZFIN|ZDB-GENE-060929-100 [details] [associations]
symbol:hnf4g "hepatocyte nuclear factor 4, gamma"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-060929-100 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 EMBL:BX640462 IPI:IPI00919669
ProteinModelPortal:F1QM73 Ensembl:ENSDART00000144193
ArrayExpress:F1QM73 Bgee:F1QM73 Uniprot:F1QM73
Length = 458
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 111/293 (37%), Positives = 169/293 (57%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C+ICGD+A+GKHYG SC+GCKGFF+R++RK Y+CR R C++D
Sbjct: 62 CAICGDKATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFNRQCVVDKDKRNQCRFCRLHK 121
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE---QRVDMKQEPADQ 174
GMK+EAVQ ER R R ++ + P+ + AE Q++
Sbjct: 122 CFRAGMKKEAVQNERDRISSR--RNIQDSHDL---PPITALAHAEALSQQITAASPMGPA 176
Query: 175 DIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSH 232
D+ ++ AT ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+ +
Sbjct: 177 DVSEKKSATISDVCESMKQQLLVLVEWAKYIPAFGELPLDDQVSLLRAHAGEHLLLGVAK 236
Query: 233 RSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIIL 292
RS+S KD +LL G ++R+ E +G + +RVL ELV +++++D E L+ I+
Sbjct: 237 RSMSYKDLLLLGNGCVIHRNCP-EPEIGRVSNRVLDELVLPFQDIQIDDNEYAALKAIVF 295
Query: 293 FNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
F+PD + L+ ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 296 FDPDAKSLRDPSKIKAMRYQVQMSLEDYINDRQYDSRGRFGELLLLLPTLQSI 348
>ZFIN|ZDB-GENE-030131-1077 [details] [associations]
symbol:hnf4a "hepatocyte nuclear factor 4, alpha"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-1077 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20393 EMBL:CR318614 EMBL:BC056550 IPI:IPI00496171
UniGene:Dr.77049 SMR:Q6PHH5 STRING:Q6PHH5
Ensembl:ENSDART00000028236 Ensembl:ENSDART00000145426
InParanoid:Q6PHH5 Uniprot:Q6PHH5
Length = 463
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 116/300 (38%), Positives = 173/300 (57%)
Query: 48 NHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXX 107
NH G+ LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R CI+D
Sbjct: 52 NH--LGAGTLCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFNRQCIVDKDKR 109
Query: 108 XXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDM 167
GMK+EAVQ ER R R S+ +S+ ++ + +L +++
Sbjct: 110 NQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALIQADVLS--RQISS 167
Query: 168 KQEPADQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNEL 225
+ DI ++ A ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E
Sbjct: 168 PGPILNGDIRTKKVAAIMDVCESMKQQLLVLVEWAKYIPAFCDLPLDDQVALLRAHAGEH 227
Query: 226 LIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELG 285
L+ + RS+ KD +LL + R+ E V + R+L ELV +++++D E
Sbjct: 228 LLLGAAKRSMMYKDILLLGNDHIIPRNCP-ELEVSRVAVRILDELVLPFQDLQIDDNEYA 286
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+ F+PD +GL ++ +R +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 287 CLKAIVFFDPDAKGLSDPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 346
>UNIPROTKB|E1BS38 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00820290 Ensembl:ENSGALT00000033724 Uniprot:E1BS38
Length = 456
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 120/297 (40%), Positives = 169/297 (56%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LCSICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C+ID
Sbjct: 45 GIGSLCSICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYSCRFSRQCVIDKDKRNQCRY 104
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEA-EQRVDMKQEP 171
GMK+EAVQ ER R R S+ ++ S + + V EA Q+V + P
Sbjct: 105 CRLKKCFRAGMKKEAVQNERDRISIRRSSYEDNGS---LSISVLTQAEAMAQQVYLPLSP 161
Query: 172 ADQ-DIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIA 228
DI ++ AT ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 162 VHSADIAMKKVATINDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLL 221
Query: 229 SFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLR 288
+ RSI D +LL + E + + R+L ELV +R++++D E CL+
Sbjct: 222 GVAKRSIPYTDFLLLGNDFII-PMHCPELEIARVATRILDELVKPLRDIQIDDNEYACLK 280
Query: 289 TIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
II F+PD +GL V+ +R +V +LE+Y + GRF+ +LL LP L+SI
Sbjct: 281 AIIFFDPDCKGLSEPGKVKNMRFQVQVNLEDYINDRQYDSRGRFSDILLLLPPLQSI 337
>UNIPROTKB|F1N848 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 OMA:EIEYIAL EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00593954 Ensembl:ENSGALT00000009154
Ensembl:ENSGALT00000039029 Uniprot:F1N848
Length = 459
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 117/295 (39%), Positives = 166/295 (56%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LCSICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C+ID
Sbjct: 56 GIGSLCSICGDRATGKHYGASSCDGCKGFFRRSVRKNHVYSCRFSRQCVIDKDKRNQCRY 115
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ E I + + A+Q + + +
Sbjct: 116 CRLKKCFRAGMKKEAVQNERDRISIRRSS-YEDNGSLSISVLTQAEAMAQQYLPLSPVHS 174
Query: 173 DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
DI ++ AT ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 175 -ADIAMKKVATINDVCESMKQQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGV 233
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RSI D +LL + E + + R+L ELV +R++++D E CL+ I
Sbjct: 234 AKRSIPYTDFLLLGNDFII-PMHCPELEIARVATRILDELVKPLRDIQIDDNEYACLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL V+ +R +V +LE+Y + GRF+ +LL LP L+SI
Sbjct: 293 IFFDPDCKGLSEPGKVKNMRFQVQVNLEDYINDRQYDSRGRFSDILLLLPPLQSI 347
>UNIPROTKB|P41235 [details] [associations]
symbol:HNF4A "Hepatocyte nuclear factor 4-alpha"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
[GO:0060398 "regulation of growth hormone receptor signaling
pathway" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0030308 "negative regulation of cell growth" evidence=IMP]
[GO:0007596 "blood coagulation" evidence=IDA] [GO:0005102 "receptor
binding" evidence=IDA] [GO:0005504 "fatty acid binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IDA] [GO:0006591 "ornithine metabolic process"
evidence=IMP] [GO:0006805 "xenobiotic metabolic process"
evidence=IMP] [GO:0055088 "lipid homeostasis" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISS] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=ISS] [GO:0001077 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0009749 "response to glucose
stimulus" evidence=ISS] [GO:0050796 "regulation of insulin
secretion" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0055091 "phospholipid
homeostasis" evidence=ISS] [GO:0070328 "triglyceride homeostasis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 EMBL:CH471077 Reactome:REACT_111045
GO:GO:0008285 GO:GO:0042803 GO:GO:0005654 GO:GO:0030154
GO:GO:0030308 GO:GO:0042493 GO:GO:0046872 GO:GO:0007596
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0005102 GO:GO:0006629
GO:GO:0019216 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
Orphanet:552 Pathway_Interaction_DB:hnf3bpathway GO:GO:0050796
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0000062 GO:GO:0006637 GO:GO:0016290 GO:GO:2000189
GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0031018
GO:GO:0051591 GO:GO:0007548 GO:GO:0006367 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 MIM:606391 HOVERGEN:HBG005606 GO:GO:0010470
GO:GO:0033159 GO:GO:0033613 EMBL:X87870 EMBL:X87871 EMBL:X87872
EMBL:Z49825 EMBL:AY680696 EMBL:AY680697 EMBL:AY680698 EMBL:U72969
EMBL:U72959 EMBL:U72961 EMBL:U72962 EMBL:U72963 EMBL:U72964
EMBL:U72965 EMBL:U72966 EMBL:U72967 EMBL:U72968 EMBL:EF591040
EMBL:AL132772 EMBL:BC137539 EMBL:BC137540 EMBL:X76930
IPI:IPI00013196 IPI:IPI00216080 IPI:IPI00300558 IPI:IPI00412368
IPI:IPI00641248 IPI:IPI00645235 IPI:IPI00847265 PIR:JC4937
PIR:JC4938 PIR:JC6096 RefSeq:NP_000448.3 RefSeq:NP_001025174.1
RefSeq:NP_001025175.1 RefSeq:NP_001245284.1 RefSeq:NP_787110.2
RefSeq:NP_849181.1 UniGene:Hs.116462 PDB:1PZL PDB:3CBB PDB:3FS1
PDBsum:1PZL PDBsum:3CBB PDBsum:3FS1 ProteinModelPortal:P41235
SMR:P41235 DIP:DIP-499N IntAct:P41235 MINT:MINT-269829
STRING:P41235 PhosphoSite:P41235 DMDM:148886624 PaxDb:P41235
PRIDE:P41235 Ensembl:ENST00000316099 Ensembl:ENST00000316673
Ensembl:ENST00000415691 Ensembl:ENST00000443598
Ensembl:ENST00000457232 GeneID:3172 KEGG:hsa:3172 UCSC:uc002xlt.3
UCSC:uc002xlu.3 UCSC:uc002xly.3 UCSC:uc002xma.3 CTD:3172
GeneCards:GC20P042984 HGNC:HGNC:5024 HPA:CAB019417 HPA:HPA004712
MIM:125850 MIM:600281 neXtProt:NX_P41235 Orphanet:263455
PharmGKB:PA29349 eggNOG:NOG241134 KO:K07292 BindingDB:P41235
ChEMBL:CHEMBL5398 EvolutionaryTrace:P41235 GenomeRNAi:3172
NextBio:12578 ArrayExpress:P41235 Bgee:P41235 Genevestigator:P41235
GermOnline:ENSG00000101076 GO:GO:0007164 GO:GO:0060398
GO:GO:0032534 Uniprot:P41235
Length = 474
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 115/295 (38%), Positives = 169/295 (57%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXX 112
G LC+ICGDRA+GKHYG SC+GCKGFF+R+VRK+ Y+CR R C++D
Sbjct: 55 GVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRY 114
Query: 113 XXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
GMK+EAVQ ER R R S+ +S+ ++ + +L +++
Sbjct: 115 CRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLS--RQITSPVSGI 172
Query: 173 DQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
+ DI ++ A+ ++C++ +QL LV+WAK+IP F LPL+DQV LLRA E L+
Sbjct: 173 NGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGA 232
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+ RS+ KD +LL V R A + + R+L ELV +E+++D E L+ I
Sbjct: 233 TKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAI 292
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I F+PD +GL ++ LR +V SLE+Y + GRF +LLL LP+L+SI
Sbjct: 293 IFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI 347
>UNIPROTKB|F1N3S3 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:DAAA02019082 IPI:IPI00705246 RefSeq:XP_002688591.2
RefSeq:XP_002704762.2 Ensembl:ENSBTAT00000014791 GeneID:100296331
KEGG:bta:100296331 Uniprot:F1N3S3
Length = 412
Score = 302 (111.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 63/163 (38%), Positives = 90/163 (55%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
N+C+ + LF V+WA+H P F LP+ DQV LLR W+EL + + + ++ + LL
Sbjct: 209 NVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLL 268
Query: 244 APGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
A A E V + R E V K+ +++D E GCL+ I LF PD GL
Sbjct: 269 AAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSD 328
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 329 PAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 371
Score = 217 (81.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 41/92 (44%), Positives = 57/92 (61%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR++R++LSY CR R+C ID
Sbjct: 58 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 117
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGT 149
+GM++EAVQ R R V ++SG+
Sbjct: 118 CFRVGMRKEAVQ--RGRIPHSLPGTVAASSGS 147
>UNIPROTKB|E2R3D0 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:AAEX03012299 EMBL:AAEX03012298 RefSeq:XP_852412.1
Ensembl:ENSCAFT00000024566 GeneID:609720 KEGG:cfa:609720
NextBio:20895307 Uniprot:E2R3D0
Length = 416
Score = 302 (111.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 63/163 (38%), Positives = 90/163 (55%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
N+C+ + LF V+WA+H P F LP+ DQV LLR W+EL + + + ++ + LL
Sbjct: 213 NVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLL 272
Query: 244 APGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
A A E V + R E V K+ +++D E GCL+ I LF PD GL
Sbjct: 273 AAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSD 332
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 333 PAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 375
Score = 217 (81.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 41/92 (44%), Positives = 57/92 (61%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR++R++LSY CR R+C ID
Sbjct: 61 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 120
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGT 149
+GM++EAVQ R R V ++SG+
Sbjct: 121 CFRVGMRKEAVQ--RGRIPHSLPGAVAASSGS 150
>UNIPROTKB|P10588 [details] [associations]
symbol:NR2F6 "Nuclear receptor subfamily 2 group F member
6" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEA] [GO:0048666 "neuron development"
evidence=IEA] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0004887 "thyroid hormone
receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 EMBL:CH471106 GO:GO:0006367
GO:GO:0043153 GO:GO:0004887 HOGENOM:HOG000260820 HOVERGEN:HBG005606
EMBL:X12794 EMBL:AK314961 EMBL:BC002669 EMBL:BC063018 EMBL:BC084544
IPI:IPI00021429 PIR:S02709 RefSeq:NP_005225.2 UniGene:Hs.466148
ProteinModelPortal:P10588 SMR:P10588 IntAct:P10588 STRING:P10588
PhosphoSite:P10588 DMDM:23503053 PRIDE:P10588
Ensembl:ENST00000291442 GeneID:2063 KEGG:hsa:2063 UCSC:uc002nfq.3
CTD:2063 GeneCards:GC19M017342 HGNC:HGNC:7977 MIM:132880
neXtProt:NX_P10588 PharmGKB:PA31760 eggNOG:NOG277317
InParanoid:P10588 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
PhylomeDB:P10588 ChEMBL:CHEMBL1961791 GenomeRNAi:2063 NextBio:8381
ArrayExpress:P10588 Bgee:P10588 CleanEx:HS_NR2F6
Genevestigator:P10588 GermOnline:ENSG00000160113 Uniprot:P10588
Length = 404
Score = 302 (111.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 63/163 (38%), Positives = 90/163 (55%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
N+C+ + LF V+WA+H P F LP+ DQV LLR W+EL + + + ++ + LL
Sbjct: 201 NVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLL 260
Query: 244 APGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
A A E V + R E V K+ +++D E GCL+ I LF PD GL
Sbjct: 261 AAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSD 320
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 321 PAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 363
Score = 217 (81.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 41/92 (44%), Positives = 57/92 (61%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR++R++LSY CR R+C ID
Sbjct: 56 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 115
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGT 149
+GM++EAVQ R R V ++SG+
Sbjct: 116 CFRVGMRKEAVQ--RGRIPHSLPGAVAASSGS 145
>UNIPROTKB|F1S962 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:CU914416 RefSeq:XP_003123537.1 UniGene:Ssc.1893
Ensembl:ENSSSCT00000015156 GeneID:100516724 KEGG:ssc:100516724
Uniprot:F1S962
Length = 414
Score = 302 (111.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 63/163 (38%), Positives = 90/163 (55%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
N+C+ + LF V+WA+H P F LP+ DQV LLR W+EL + + + ++ + LL
Sbjct: 211 NVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLL 270
Query: 244 APGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
A A E V + R E V K+ +++D E GCL+ I LF PD GL
Sbjct: 271 AAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSD 330
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 331 PAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 373
Score = 217 (81.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 41/92 (44%), Positives = 57/92 (61%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR++R++LSY CR R+C ID
Sbjct: 60 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 119
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGT 149
+GM++EAVQ R R V ++SG+
Sbjct: 120 CFRVGMRKEAVQ--RGRIPHSLPGAVAASSGS 149
>ZFIN|ZDB-GENE-990415-253 [details] [associations]
symbol:nr2f5 "nuclear receptor subfamily 2, group
F, member 5" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-253 GO:GO:0005634
GO:GO:0046872 GO:GO:0007601 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:X70300 IPI:IPI00492421 PIR:S35334
RefSeq:NP_571261.1 UniGene:Dr.22 ProteinModelPortal:Q06726
SMR:Q06726 STRING:Q06726 Ensembl:ENSDART00000040769 GeneID:30427
KEGG:dre:30427 CTD:30427 InParanoid:Q06726 KO:K08702 OMA:HYNENGP
OrthoDB:EOG4JHCFP NextBio:20806829 ArrayExpress:Q06726 Bgee:Q06726
Uniprot:Q06726
Length = 403
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 117/311 (37%), Positives = 164/311 (52%)
Query: 46 PPNHPLCGSK--HL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P N L G K ++ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR R+C I
Sbjct: 39 PGNDALSGDKIPNVDCMVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRGNRDCPI 98
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERD-----SNEVESTSGT-LIEMPVE 156
D L +GM+REAVQ R + SN + +G + +
Sbjct: 99 DQHHRNQCQYCRLKKCLKVGMRREAVQRGRMSNSQSSPGQYLSNGSDPYNGQPYLSGFIS 158
Query: 157 RILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVL 216
+L AE + N NIC+ + LF V+WAK+IP F L L DQV
Sbjct: 159 LLLRAEPYPTSRYGAQCMQSNNLMGIENICELAARLLFSAVEWAKNIPFFPDLQLMDQVA 218
Query: 217 LLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKM 274
LLR W+EL + + + S+ + LLA ++ S V D RV E V K+
Sbjct: 219 LLRMSWSELFVLNAAQCSMPLHVAPLLA-AAGLHASPMSAERVVAFMDHIRVFQEQVEKL 277
Query: 275 REMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAK 334
+ +++D E CL++I+LF D GL VE ++EK +LEEY R + +P RF +
Sbjct: 278 KALQVDTAEYSCLKSIVLFTSDAMGLSDVAHVESIQEKSQCALEEYVRNQYPNQPNRFGR 337
Query: 335 LLLRLPSLRSI 345
LLLRLPSLR +
Sbjct: 338 LLLRLPSLRIV 348
>UNIPROTKB|Q9TTR7 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9913
"Bos taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0001972 "retinoic acid binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0060849
"regulation of transcription involved in lymphatic endothelial cell
fate commitment" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IEA] [GO:0045736 "negative regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0001937 "negative regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
OrthoDB:EOG4MGS7H EMBL:AJ249441 EMBL:BC123677 IPI:IPI00695873
PIR:JH0787 RefSeq:NP_776827.1 UniGene:Bt.53763
ProteinModelPortal:Q9TTR7 SMR:Q9TTR7 STRING:Q9TTR7
Ensembl:ENSBTAT00000023969 GeneID:281945 KEGG:bta:281945 CTD:7026
InParanoid:Q9TTR7 KO:K08548 OMA:GPPNNTQ NextBio:20805822
ArrayExpress:Q9TTR7 GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
Uniprot:Q9TTR7
Length = 414
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPSHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>ZFIN|ZDB-GENE-040426-2351 [details] [associations]
symbol:nr2f6b "nuclear receptor subfamily 2, group
F, member 6b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040426-2351 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 eggNOG:NOG277317 OrthoDB:EOG4FN4HT HSSP:P20393
EMBL:BX248501 EMBL:CT573239 EMBL:BC065332 IPI:IPI00503290
RefSeq:NP_998404.1 UniGene:Dr.16181 SMR:Q6P115
Ensembl:ENSDART00000027666 Ensembl:ENSDART00000123931 GeneID:406522
KEGG:dre:406522 CTD:406522 InParanoid:Q6P115 OMA:VMGIDSI
NextBio:20818095 Uniprot:Q6P115
Length = 404
Score = 296 (109.3 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 64/165 (38%), Positives = 96/165 (58%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
NIC+ + LF ++WA++IP+F LP+ +QV LLR W+EL I + + ++ + LL
Sbjct: 201 NICELAARLLFSTIEWARNIPYFPDLPVSEQVALLRLSWSELFILNAAQSALPLHTAPLL 260
Query: 244 APGVTVYRSSAHEAG-VGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL 300
A + SS A V D RV + V K+ +++D E CL+ I LF+PD GL
Sbjct: 261 A--AAGFHSSPMPADRVVSFMDQVRVFQDQVDKLTRLQVDSVEYSCLKAIALFSPDACGL 318
Query: 301 KSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+EK +L EY R+ + +P RF +LLLRLP+LR++
Sbjct: 319 SDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRLLLRLPALRAV 363
Score = 212 (79.7 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR++R++L+Y CR R C ID
Sbjct: 53 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLNYTCRSNRECQIDQHHRNQCQYCRLKK 112
Query: 118 XLNMGMKREAVQEER 132
+GM++EAVQ R
Sbjct: 113 CFRVGMRKEAVQRGR 127
>UNIPROTKB|Q90733 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISS] [GO:0001972
"retinoic acid binding" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548
GO:GO:0001972 EMBL:U00697 IPI:IPI00598209 PIR:I50689
RefSeq:NP_989752.1 UniGene:Gga.4445 ProteinModelPortal:Q90733
SMR:Q90733 STRING:Q90733 GeneID:386585 KEGG:gga:386585
InParanoid:Q90733 NextBio:20813947 Uniprot:Q90733
Length = 410
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 71 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 130
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 131 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 190
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 191 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 250
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 251 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 309
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 310 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 369
>UNIPROTKB|E2QW41 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060849 "regulation of transcription involved
in lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AAEX03002267
Ensembl:ENSCAFT00000012887 NextBio:20854275 Uniprot:E2QW41
Length = 394
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>UNIPROTKB|P24468 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001893 "maternal
placenta development" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009956 "radial pattern formation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0032355 "response to estradiol stimulus" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0001972 "retinoic acid
binding" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IC;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IMP]
[GO:0001937 "negative regulation of endothelial cell proliferation"
evidence=IMP] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA;TAS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0001764
Pathway_Interaction_DB:telomerasepathway GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0048514 GO:GO:0006629
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 EMBL:CH471101
GO:GO:0060173 GO:GO:0045736 GO:GO:0010596 GO:GO:0007519
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
UniGene:Hs.519445 CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972
GO:GO:0009956 GO:GO:0060849 EMBL:M64497 EMBL:U60477 EMBL:AB307711
EMBL:FM208183 EMBL:AK298824 EMBL:AK301595 EMBL:AK316086
EMBL:HQ692849 EMBL:HQ692850 EMBL:AC016251 EMBL:BC014664
EMBL:BC042897 EMBL:BC106083 EMBL:M62760 IPI:IPI00028611
IPI:IPI00789037 PIR:A37133 RefSeq:NP_001138627.1
RefSeq:NP_001138628.1 RefSeq:NP_001138629.1 RefSeq:NP_066285.1
UniGene:Hs.347991 PDB:3CJW PDBsum:3CJW ProteinModelPortal:P24468
SMR:P24468 DIP:DIP-29713N IntAct:P24468 MINT:MINT-1183332
STRING:P24468 PhosphoSite:P24468 DMDM:114203 PRIDE:P24468
Ensembl:ENST00000394166 Ensembl:ENST00000394171
Ensembl:ENST00000421109 Ensembl:ENST00000453270 GeneID:7026
KEGG:hsa:7026 UCSC:uc010uri.2 GeneCards:GC15P096869 HGNC:HGNC:7976
MIM:107773 neXtProt:NX_P24468 PharmGKB:PA31759 InParanoid:P24468
PhylomeDB:P24468 ChEMBL:CHEMBL1961790 EvolutionaryTrace:P24468
GenomeRNAi:7026 NextBio:27451 ArrayExpress:P24468 Bgee:P24468
CleanEx:HS_NR2F2 Genevestigator:P24468 GermOnline:ENSG00000185551
Uniprot:P24468
Length = 414
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>UNIPROTKB|F1SCJ6 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0009952 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 CTD:7026 KO:K08548
OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:CU407120
RefSeq:NP_001177181.1 UniGene:Ssc.8676 GeneID:100153983
KEGG:ssc:100153983 Ensembl:ENSSSCT00000002511 Uniprot:F1SCJ6
Length = 414
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>MGI|MGI:1352452 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0001893 "maternal
placenta development" evidence=IMP] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=ISO]
[GO:0001972 "retinoic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0060173
"limb development" evidence=IMP] [GO:0060674 "placenta blood vessel
development" evidence=IMP] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0060849 "regulation of
transcription involved in lymphatic endothelial cell fate
commitment" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352452 GO:GO:0005634
GO:GO:0001764 GO:GO:0045893 GO:GO:0032355 GO:GO:0009952
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0009566
GO:GO:0000122 GO:GO:0001937 GO:GO:0001893 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548 OMA:GPPNNTQ
GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:X76653 EMBL:U07635
EMBL:BC042484 IPI:IPI00117234 RefSeq:NP_033827.2 UniGene:Mm.158143
ProteinModelPortal:P43135 SMR:P43135 STRING:P43135
PhosphoSite:P43135 PaxDb:P43135 PRIDE:P43135
Ensembl:ENSMUST00000032768 GeneID:11819 KEGG:mmu:11819
InParanoid:P43135 NextBio:279711 Bgee:P43135 CleanEx:MM_NR2F2
Genevestigator:P43135 GermOnline:ENSMUSG00000030551 GO:GO:0001945
GO:GO:0060674 GO:GO:0060707 Uniprot:P43135
Length = 414
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>RGD|69305 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0001893
"maternal placenta development" evidence=IEA;ISO] [GO:0001937
"negative regulation of endothelial cell proliferation"
evidence=IEA;ISO] [GO:0001972 "retinoic acid binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009956 "radial pattern
formation" evidence=IEA;ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] [GO:0060674
"placenta blood vessel development" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0060849 "regulation of transcription involved in lymphatic
endothelial cell fate commitment" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:7026
KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1 UniGene:Rn.17815
ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>UNIPROTKB|O09018 [details] [associations]
symbol:Nr2f2 "COUP transcription factor 2" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0032355 GO:GO:0009952 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900
GO:GO:0000122 GO:GO:0001937 GO:GO:0060173 GO:GO:0045736
GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956
GO:GO:0060849 EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1
UniGene:Rn.17815 ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 112/300 (37%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG------TLIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + T+G + + + +L AE
Sbjct: 135 RLKKCLKVGMRREAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTS 194
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 195 RFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFV 254
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 255 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 313
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 314 CLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTV 373
>UNIPROTKB|Q9TTR8 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AJ249440 IPI:IPI00710549
PIR:JH0786 RefSeq:NP_786998.1 UniGene:Bt.543
ProteinModelPortal:Q9TTR8 SMR:Q9TTR8 STRING:Q9TTR8 GeneID:327684
KEGG:bta:327684 CTD:7025 HOGENOM:HOG000260820 HOVERGEN:HBG005606
InParanoid:Q9TTR8 KO:K08547 OrthoDB:EOG4MGS7H NextBio:20810149
Uniprot:Q9TTR8
Length = 424
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 110/300 (36%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 83 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 142
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 143 RLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 202
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 203 RYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 262
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 263 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 321
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 322 CLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 381
>UNIPROTKB|P10589 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0001764
GO:GO:0005654 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900 GO:GO:0000122
GO:GO:0003713 GO:GO:0006367 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H EMBL:X16155
EMBL:X12795 EMBL:BC004154 EMBL:BC017493 IPI:IPI00021431 PIR:S02710
RefSeq:NP_005645.1 UniGene:Hs.519445 PDB:2EBL PDBsum:2EBL
ProteinModelPortal:P10589 SMR:P10589 DIP:DIP-622N STRING:P10589
PhosphoSite:P10589 DMDM:116959 PaxDb:P10589 PRIDE:P10589 DNASU:7025
Ensembl:ENST00000327111 GeneID:7025 KEGG:hsa:7025 UCSC:uc003kkj.3
GeneCards:GC05P092920 HGNC:HGNC:7975 HPA:CAB019281 MIM:132890
neXtProt:NX_P10589 PharmGKB:PA31758 InParanoid:P10589 OMA:DKGQGQP
PhylomeDB:P10589 ChEMBL:CHEMBL1961789 ChiTaRS:NR2F1
EvolutionaryTrace:P10589 GenomeRNAi:7025 NextBio:27447 Bgee:P10589
CleanEx:HS_NR2F1 Genevestigator:P10589 GermOnline:ENSG00000175745
Uniprot:P10589
Length = 423
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 110/300 (36%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 82 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 141
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 142 RLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 201
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 202 RYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 261
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 262 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 320
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 321 CLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 380
>UNIPROTKB|F1RNX7 [details] [associations]
symbol:NR2F1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 KO:K08547 OMA:DKGQGQP EMBL:CU463069
RefSeq:XP_003354261.1 Ensembl:ENSSSCT00000015465 GeneID:100621341
KEGG:ssc:100621341 Uniprot:F1RNX7
Length = 422
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 110/300 (36%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 81 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 140
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 141 RLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 200
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 201 RYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 260
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 261 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 319
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 320 CLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 379
>MGI|MGI:1352451 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IDA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352451
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 ChiTaRS:NR2F1 EMBL:U07625 EMBL:X74134
IPI:IPI00119059 PIR:I48305 RefSeq:NP_034281.2 UniGene:Mm.439653
ProteinModelPortal:Q60632 SMR:Q60632 STRING:Q60632
PhosphoSite:Q60632 PaxDb:Q60632 PRIDE:Q60632 GeneID:13865
KEGG:mmu:13865 InParanoid:Q60632 NextBio:284760 CleanEx:MM_NR2F1
Genevestigator:Q60632 GermOnline:ENSMUSG00000069171 Uniprot:Q60632
Length = 422
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 110/300 (36%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 81 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 140
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 141 RLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 200
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 201 RYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 260
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 261 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 319
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 320 CLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 379
>UNIPROTKB|F2Z3S9 [details] [associations]
symbol:Nr2f1 "Protein Nr2f1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621682 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 OMA:DKGQGQP IPI:IPI00554118
ProteinModelPortal:F2Z3S9 SMR:F2Z3S9 Ensembl:ENSRNOT00000020044
Uniprot:F2Z3S9
Length = 420
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 110/300 (36%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 79 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 138
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 139 RLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 198
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 199 RYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 258
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 259 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 317
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 318 CLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 377
>ZFIN|ZDB-GENE-030131-4362 [details] [associations]
symbol:nr2f6a "nuclear receptor subfamily 2, group
F, member 6a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-030131-4362 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08549 OMA:DPNGGTN HSSP:P20393 EMBL:CR384062
EMBL:BC065330 IPI:IPI00494205 RefSeq:NP_991120.1 UniGene:Dr.77527
SMR:Q6P117 Ensembl:ENSDART00000022379 GeneID:325637 KEGG:dre:325637
CTD:325637 InParanoid:Q6P117 NextBio:20809398 Uniprot:Q6P117
Length = 402
Score = 291 (107.5 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 63/165 (38%), Positives = 97/165 (58%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
+IC+ + LF +++WA++IP+F LP+ +QV LLR W+EL I + + ++ + LL
Sbjct: 199 SICELAARLLFSIIEWARNIPYFPELPVSEQVALLRLSWSELFILNAAQSALPLHMAPLL 258
Query: 244 APGVTVYRSSAHEAG-VGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL 300
A + SS A V D RV + V K+ +++D E CL+ I LF+PD GL
Sbjct: 259 A--AAGFHSSPMSAERVVSFMDQVRVFQDQVEKLTRLQVDSAEYSCLKAIALFSPDACGL 316
Query: 301 KSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+EK +L EY R+ + +P RF +LLLRLP+LR++
Sbjct: 317 TDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRLLLRLPALRAV 361
Score = 214 (80.4 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR+VR++L+Y CR R+C ID
Sbjct: 53 CVVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLNYTCRSNRDCQIDQHHRNQCQYCRLKK 112
Query: 118 XLNMGMKREAVQEER 132
+GM++EAVQ R
Sbjct: 113 CFRVGMRKEAVQRGR 127
>ZFIN|ZDB-GENE-980526-115 [details] [associations]
symbol:nr2f1a "nuclear receptor subfamily 2, group
F, member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-115 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H
OMA:DKGQGQP EMBL:X70299 EMBL:CR751602 EMBL:BC056574 EMBL:BC066671
EMBL:U93463 IPI:IPI00499015 IPI:IPI00923775 IPI:IPI00923787
PIR:S35333 RefSeq:NP_571255.1 UniGene:Dr.16
ProteinModelPortal:Q06725 SMR:Q06725 Ensembl:ENSDART00000051263
Ensembl:ENSDART00000133384 GeneID:30418 KEGG:dre:30418 CTD:30418
InParanoid:O42536 NextBio:20806824 ArrayExpress:Q06725 Bgee:Q06725
Uniprot:Q06725
Length = 411
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 109/300 (36%), Positives = 159/300 (53%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 72 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 131
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 132 RLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 191
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 192 RYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 251
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R+ E V K++ + +D E
Sbjct: 252 LNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYS 310
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
C++ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 311 CIKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 370
>UNIPROTKB|F1N056 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 IPI:IPI00710549
OMA:DKGQGQP EMBL:DAAA02021281 Ensembl:ENSBTAT00000023401
Uniprot:F1N056
Length = 353
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 109/299 (36%), Positives = 157/299 (52%)
Query: 56 HL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
H+ C +CGD++SG HYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 13 HIECVVCGDKSSGHHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCR 72
Query: 115 XXXXLNMGMKREAVQEERQRTKERDSNEVESTSGT------LIEMPVERILEAEQRVDMK 168
L +GM+REAVQ R + + + T+G + + +L AE +
Sbjct: 73 LKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTSR 132
Query: 169 QEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIA 228
N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 133 YGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVL 192
Query: 229 SFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELGC 286
+ + S+ + LLA ++ S V D R+ E V K++ + +D E C
Sbjct: 193 NAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSC 251
Query: 287 LRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
L+ I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLPSLR++
Sbjct: 252 LKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTV 310
>MGI|MGI:1352453 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member
6" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0050965 "detection of temperature stimulus involved in sensory
perception of pain" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352453
GO:GO:0005634 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 EMBL:CH466569
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 HSSP:P03372
CTD:2063 eggNOG:NOG277317 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
EMBL:X76654 EMBL:L25674 EMBL:AK131941 EMBL:AK171552 EMBL:BC008138
IPI:IPI00117237 PIR:I48734 PIR:I49640 RefSeq:NP_034280.2
UniGene:Mm.28989 ProteinModelPortal:P43136 SMR:P43136 IntAct:P43136
STRING:P43136 PhosphoSite:P43136 PaxDb:P43136 PRIDE:P43136
Ensembl:ENSMUST00000002466 GeneID:13864 KEGG:mmu:13864
InParanoid:Q922G8 NextBio:284756 Bgee:P43136 CleanEx:MM_NR2F6
Genevestigator:P43136 GermOnline:ENSMUSG00000002393 Uniprot:P43136
Length = 390
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 106/297 (35%), Positives = 154/297 (51%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKR++R++LSY CR R+C ID
Sbjct: 57 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 116
Query: 118 XLNMGMKREAVQEER--------QRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQ 169
+GM++EAVQ R + VE +G + + ++L AE +
Sbjct: 117 CFRVGMRKEAVQRGRIPHALPGPAACSPPGATGVEPFTGPPVSELIAQLLRAEPYPAAGR 176
Query: 170 EPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIAS 229
++ N+C+ + LF V+WA+H P F LP DQV LLR W+EL + +
Sbjct: 177 FGGGGAVLG---IDNVCELAARLLFSTVEWARHAPFFPELPAADQVALLRLSWSELFVLN 233
Query: 230 FSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLR 288
+ ++ + LLA A E V + R E V K+ +++D E GCL+
Sbjct: 234 AAQAALPLHTAPLLAAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLK 293
Query: 289 TIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I LF PD GL VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 294 AIALFTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 350
>MGI|MGI:1346317 [details] [associations]
symbol:Nr2e3 "nuclear receptor subfamily 2, group E, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive
regulation of rhodopsin gene expression" evidence=IGI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346317 GO:GO:0008285
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0030522
GO:GO:0042462 HOGENOM:HOG000260820 HOVERGEN:HBG005606
eggNOG:NOG277339 OrthoDB:EOG41C6WF CTD:10002 KO:K08546
EMBL:AF148129 EMBL:AF204053 EMBL:BC017521 IPI:IPI00135703
RefSeq:NP_038736.1 UniGene:Mm.103641 ProteinModelPortal:Q9QXZ7
SMR:Q9QXZ7 STRING:Q9QXZ7 PhosphoSite:Q9QXZ7 PRIDE:Q9QXZ7
Ensembl:ENSMUST00000034831 GeneID:23958 KEGG:mmu:23958
InParanoid:Q9QXZ7 OMA:MLSQHTK NextBio:303796 Bgee:Q9QXZ7
CleanEx:MM_NR2E3 Genevestigator:Q9QXZ7
GermOnline:ENSMUSG00000032292 GO:GO:0045872 Uniprot:Q9QXZ7
Length = 395
Score = 293 (108.2 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 64/184 (34%), Positives = 99/184 (53%)
Query: 160 EAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLR 219
+AE+ +D+ + + I + + + LF V WAK++P F+ LP DQV+LL
Sbjct: 183 DAEENIDVTSNDPEFP-ASPCSLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241
Query: 220 AGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKM 279
WNEL + S+ + LLAP SS + R L E +S+ R + +
Sbjct: 242 EAWNELFLLGAIQWSLPLDSCPLLAPP-EASGSSQGRLALASAETRFLQETISRFRALAV 300
Query: 280 DKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRL 339
D TE CL+ ++LF P+ RGLK + VE L+++ L ++++ +H +P RF KLLL L
Sbjct: 301 DPTEFACLKALVLFKPETRGLKDPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLL 360
Query: 340 PSLR 343
PSLR
Sbjct: 361 PSLR 364
Score = 197 (74.4 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 36/77 (46%), Positives = 46/77 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXXX 116
C +CGD +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 40 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLK 99
Query: 117 XXLNMGMKREAVQEERQ 133
L GM ++AVQ ERQ
Sbjct: 100 KCLQAGMNQDAVQNERQ 116
>ZFIN|ZDB-GENE-030131-2730 [details] [associations]
symbol:hnf4b "hepatic nuclear factor 4, beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030131-2730 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 eggNOG:NOG241134 HSSP:P11473
EMBL:BC065657 IPI:IPI00509611 RefSeq:NP_991109.1 UniGene:Dr.6336
ProteinModelPortal:Q6P0E0 SMR:Q6P0E0 GeneID:324010 KEGG:dre:324010
CTD:324010 NextBio:20808536 Uniprot:Q6P0E0
Length = 465
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 110/296 (37%), Positives = 158/296 (53%)
Query: 50 PLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXX 109
P S LC+IC DRA+GKHYG SC+GCKGFF+R+VRK+ +Y CR R C++D
Sbjct: 55 PQQSSMSLCAICADRATGKHYGASSCDGCKGFFRRSVRKNHAYTCRFSRQCVVDKDKRNQ 114
Query: 110 XXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQ 169
GM++EAVQ ER R R N+ T + M E ++ +
Sbjct: 115 CRYCRLRKCFRAGMRKEAVQNERDRISCRRENQGVGTLTIDVLMQAEAYTHQSLSQNLMR 174
Query: 170 EPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIAS 229
+ + I ++C++ +QL LV+WAK IP F L ++D+V LLRA E LI
Sbjct: 175 DVGSKKIAG---VGDVCESMKQQLLLLVEWAKRIPEFCELSVDDRVALLRAHSAEHLILG 231
Query: 230 FSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRT 289
+ RS+ D ILL + + E + + R+L ELV ++E+ + TE CL+T
Sbjct: 232 VARRSLPYSDIILLGNDFIIPVGGS-EQEMSKVAVRILEELVRPLKELNITDTEFVCLKT 290
Query: 290 IILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I+ F PD GL+ Q V LR + L+E T SE+ GRF +LLL L +L+S+
Sbjct: 291 IVFFAPDCPGLQCAQAVRRLRFQAQVLLDEAT----SEQRGRFGELLLLLTTLQSV 342
>ZFIN|ZDB-GENE-040426-1438 [details] [associations]
symbol:nr2f1b "nuclear receptor subfamily 2, group
F, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-1438 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
EMBL:BC056748 EMBL:BC065651 IPI:IPI00482303 IPI:IPI00923764
RefSeq:NP_956886.1 UniGene:Dr.86046 HSSP:P19793
ProteinModelPortal:Q6PH18 SMR:Q6PH18 Ensembl:ENSDART00000027242
GeneID:393564 KEGG:dre:393564 CTD:393564 InParanoid:Q6PH18
OMA:MENIRIF NextBio:20814585 ArrayExpress:Q6PH18 Bgee:Q6PH18
Uniprot:Q6PH18
Length = 389
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 108/300 (36%), Positives = 157/300 (52%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC +D
Sbjct: 50 QHVECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPVDQHHRNQCQYC 109
Query: 114 XXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMP------VERILEAEQRVDM 167
L +GM+REAVQ R + + + T+G + + +L AE
Sbjct: 110 RLKKCLKVGMRREAVQRGRMPPNQPNPSHYALTNGDHLNGQCYLSGYISLLLRAEPYPAS 169
Query: 168 KQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLI 227
+ N NIC+ + LF V+WA++IP F L + DQV LLR W+EL +
Sbjct: 170 RYGNQCMQSGNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFV 229
Query: 228 ASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMDKTELG 285
+ + S+ + LLA ++ S V D R E V K++ +++D E
Sbjct: 230 LNAAQSSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRFFQEQVEKLKALQVDSAEYS 288
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
C + I+LF D GL +E L+EK +LEEY R + +P RF KLLLRLP+LR +
Sbjct: 289 CAKAIVLFTSDACGLSDIPHIEGLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPALRMV 348
>UNIPROTKB|F1PX81 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 OMA:GPPNNTQ
EMBL:AAEX03002267 Ensembl:ENSCAFT00000017350 Uniprot:F1PX81
Length = 420
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 112/306 (36%), Positives = 159/306 (51%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++LSY CR RNC ID
Sbjct: 75 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYC 134
Query: 114 XXXXXLNMGMKREA------VQEERQRTKERDSNEVESTSG------TLIEMPVERILEA 161
L +GM+REA VQ R + + T+G + + + +L A
Sbjct: 135 RLKKCLKVGMRREAPFLPAAVQRGRMPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRA 194
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E + N NIC+ + LF V+WA++IP F L + DQV LLR
Sbjct: 195 EPYPTSRFGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLT 254
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKM 279
W+EL + + + S+ + LLA ++ S V D R+ E V K++ + +
Sbjct: 255 WSELFVLNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHV 313
Query: 280 DKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRL 339
D E CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRL
Sbjct: 314 DSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRL 373
Query: 340 PSLRSI 345
PSLR++
Sbjct: 374 PSLRTV 379
>ZFIN|ZDB-GENE-990415-252 [details] [associations]
symbol:nr2f2 "nuclear receptor subfamily 2, group
F, member 2" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0060838 "lymphatic endothelial
cell fate commitment" evidence=IMP] [GO:0001946 "lymphangiogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-252 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001946 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
OMA:GPPNNTQ EMBL:BX569787 EMBL:BX936364 EMBL:BC162484
IPI:IPI00508689 UniGene:Dr.77152 STRING:B3DGQ7
Ensembl:ENSDART00000059976 GO:GO:0060838 Uniprot:B3DGQ7
Length = 428
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 111/306 (36%), Positives = 159/306 (51%)
Query: 55 KHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXX 113
+H+ C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y CR RNC ID
Sbjct: 83 QHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYC 142
Query: 114 XXXXXLNMGMKRE------AVQEERQRTKERDSNEVESTSG------TLIEMPVERILEA 161
L +GM+RE AVQ R + + T+G + + + +L A
Sbjct: 143 RLKKCLKVGMRREVSLFTAAVQRGRMPPTQPHHGQFALTNGDPLHCHSYLSGYISLLLRA 202
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E + N NIC+ + LF V+WA++IP F L + DQV LLR
Sbjct: 203 EPYPTSRYGSQCMQPNNIMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLT 262
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKM 279
W+EL + + + S+ + LLA ++ S V D R+ E V K++ + +
Sbjct: 263 WSELFVLNAAQCSMPLHVAPLLA-AAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHV 321
Query: 280 DKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRL 339
D E CL+ I+LF D GL VE L+EK +LEEY R + +P RF KLLLRL
Sbjct: 322 DSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRL 381
Query: 340 PSLRSI 345
PSLR++
Sbjct: 382 PSLRTV 387
>UNIPROTKB|F1ML62 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 UniGene:Bt.241 CTD:10002
KO:K08546 OMA:MLSQHTK GO:GO:0045872 EMBL:DAAA02027989
IPI:IPI01028398 RefSeq:NP_001161372.1 Ensembl:ENSBTAT00000018926
GeneID:281944 KEGG:bta:281944 NextBio:20805821 Uniprot:F1ML62
Length = 411
Score = 288 (106.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 60/163 (36%), Positives = 95/163 (58%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
+I + + + LF V WAK++P F+ LP DQV+LL W+EL + S+ + + LL
Sbjct: 220 SIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPLDNCPLL 279
Query: 244 A-PGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
A P + SS + R+L E +S+ R + +D TE C++ ++LF P+ RGLK
Sbjct: 280 ALPEASAGGSSQGRLVLASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLKD 339
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ VE L+++ L ++++ +H +P RF KLLL LPSLR I
Sbjct: 340 PEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFI 382
Score = 199 (75.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 40/91 (43%), Positives = 52/91 (57%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXXX 116
C +CGD +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 39 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLK 98
Query: 117 XXLNMGMKREAVQEERQ--RTKERDSNEVES 145
L GM ++AVQ ERQ T + + VES
Sbjct: 99 KCLQAGMNQDAVQNERQPRSTAQVRMDSVES 129
>UNIPROTKB|Q9Y5X4 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007602 "phototransduction"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 Orphanet:791 GO:GO:0006367 GO:GO:0007602
HOGENOM:HOG000260820 HOVERGEN:HBG005606 eggNOG:NOG277339
OrthoDB:EOG41C6WF EMBL:AF121129 EMBL:AF148128 EMBL:AJ276674
IPI:IPI00001888 IPI:IPI00215922 RefSeq:NP_055064.1
RefSeq:NP_057430.1 UniGene:Hs.187354 ProteinModelPortal:Q9Y5X4
SMR:Q9Y5X4 MINT:MINT-4302911 STRING:Q9Y5X4 PhosphoSite:Q9Y5X4
DMDM:8928275 PRIDE:Q9Y5X4 DNASU:10002 GeneID:10002 KEGG:hsa:10002
UCSC:uc002ath.1 CTD:10002 GeneCards:GC15P072084 HGNC:HGNC:7974
MIM:268100 MIM:604485 MIM:611131 neXtProt:NX_Q9Y5X4 Orphanet:53540
PharmGKB:PA31757 InParanoid:Q9Y5X4 KO:K08546 BindingDB:Q9Y5X4
ChEMBL:CHEMBL4374 GenomeRNAi:10002 NextBio:37775 CleanEx:HS_NR2E3
Genevestigator:Q9Y5X4 GermOnline:ENSG00000031544 Uniprot:Q9Y5X4
Length = 410
Score = 288 (106.4 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 60/163 (36%), Positives = 94/163 (57%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
+I + + + LF V WAK++P F++LP DQV+LL W+EL + S+ + LL
Sbjct: 219 SIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLL 278
Query: 244 APGVTVYRSSAH-EAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
AP A + + RVL E +S+ R + +D TE C++ ++LF P+ RGLK
Sbjct: 279 APPEASAAGGAQGRLTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKD 338
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ VE L+++ L ++++ +H +P RF KLLL LPSLR I
Sbjct: 339 PEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFI 381
Score = 199 (75.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 44/104 (42%), Positives = 58/104 (55%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXXX 116
C +CGD +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 47 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLK 106
Query: 117 XXLNMGMKREAVQEERQ-RTKER---DSNE--VESTSGTLIEMP 154
L GM ++AVQ ERQ R+ + DS E ES +L+ P
Sbjct: 107 KCLQAGMNQDAVQNERQPRSTAQVHLDSMESNTESRPESLVAPP 150
>UNIPROTKB|F1SIS0 [details] [associations]
symbol:F1SIS0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045872
"positive regulation of rhodopsin gene expression" evidence=IEA]
[GO:0042462 "eye photoreceptor cell development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 OMA:MLSQHTK GO:GO:0045872
EMBL:CU570658 Ensembl:ENSSSCT00000005490 Uniprot:F1SIS0
Length = 419
Score = 289 (106.8 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 58/161 (36%), Positives = 94/161 (58%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKD-GIL 242
+I + + + LF V WAK++P F++LP DQV+LL W+EL + S+ + +L
Sbjct: 229 SIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPLL 288
Query: 243 LAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
+ P + SS + RVL E +S+ R + +D TE C++ ++LF P+ RGLK
Sbjct: 289 VPPEASAAGSSQGRLALASAETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKD 348
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
+ VE L+++ L ++++ +H +P RF KLLL LPSLR
Sbjct: 349 PEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLR 389
Score = 197 (74.4 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 36/77 (46%), Positives = 46/77 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXXX 116
C +CGD +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 47 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQMGAGMCPVDKAHRNQCQACRLK 106
Query: 117 XXLNMGMKREAVQEERQ 133
L GM ++AVQ ERQ
Sbjct: 107 KCLQAGMNQDAVQNERQ 123
>RGD|621685 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member 6"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043153 "entrainment of circadian clock by photoperiod"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;IDA] [GO:0048666 "neuron development"
evidence=IEA;ISO] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0003700
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 GO:GO:0043153
HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063 eggNOG:NOG277317
KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926 IPI:IPI00192618
RefSeq:NP_620813.1 UniGene:Rn.25840 ProteinModelPortal:O09017
SMR:O09017 STRING:O09017 PhosphoSite:O09017 GeneID:245980
KEGG:rno:245980 UCSC:RGD:621685 InParanoid:O09017 NextBio:623270
ArrayExpress:O09017 Genevestigator:O09017
GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 106/297 (35%), Positives = 152/297 (51%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKRT+R++LSY CR R+C ID
Sbjct: 57 CVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 116
Query: 118 XLNMGMKREAVQEER--------QRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQ 169
+GM++EAVQ + VE +G + + ++L AE +
Sbjct: 117 CFRVGMRKEAVQPGPIPHALPGPAACSPPGAAGVEPFAGPPVSELIAQLLRAEPYPAAGR 176
Query: 170 EPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIAS 229
++ N+C+ + LF V+WA+H P F LP DQV LLR W+EL + +
Sbjct: 177 FGGGGAVLG---IDNVCELAARLLFSTVEWARHAPFFPELPAADQVGLLRLSWSELFVLN 233
Query: 230 FSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLR 288
+ + + LLA A E V + R E V K+ +++D E GCL+
Sbjct: 234 AAQAPVPLHTAPLLAAAGLHAGPMAAERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLK 293
Query: 289 TIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I LF PD GL VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 294 AIALFTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 350
>UNIPROTKB|O09017 [details] [associations]
symbol:Nr2f6 "Nuclear receptor subfamily 2 group F member
6" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0003700 GO:GO:0000122 GO:GO:0048666 GO:GO:0030522
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063
eggNOG:NOG277317 KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926
IPI:IPI00192618 RefSeq:NP_620813.1 UniGene:Rn.25840
ProteinModelPortal:O09017 SMR:O09017 STRING:O09017
PhosphoSite:O09017 GeneID:245980 KEGG:rno:245980 UCSC:RGD:621685
InParanoid:O09017 NextBio:623270 ArrayExpress:O09017
Genevestigator:O09017 GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 106/297 (35%), Positives = 152/297 (51%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYGV++CEGCK FFKRT+R++LSY CR R+C ID
Sbjct: 57 CVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKK 116
Query: 118 XLNMGMKREAVQEER--------QRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQ 169
+GM++EAVQ + VE +G + + ++L AE +
Sbjct: 117 CFRVGMRKEAVQPGPIPHALPGPAACSPPGAAGVEPFAGPPVSELIAQLLRAEPYPAAGR 176
Query: 170 EPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIAS 229
++ N+C+ + LF V+WA+H P F LP DQV LLR W+EL + +
Sbjct: 177 FGGGGAVLG---IDNVCELAARLLFSTVEWARHAPFFPELPAADQVGLLRLSWSELFVLN 233
Query: 230 FSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD-RVLTELVSKMREMKMDKTELGCLR 288
+ + + LLA A E V + R E V K+ +++D E GCL+
Sbjct: 234 AAQAPVPLHTAPLLAAAGLHAGPMAAERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLK 293
Query: 289 TIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I LF PD GL VE L+EK +L EY R + +P RF +LLLRLP+LR++
Sbjct: 294 AIALFTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAV 350
>UNIPROTKB|O42101 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 InterPro:IPR016355 PIRSF:PIRSF002530 EMBL:AB002403
IPI:IPI00679374 RefSeq:NP_990409.1 UniGene:Gga.572
ProteinModelPortal:O42101 SMR:O42101 STRING:O42101 GeneID:395961
KEGG:gga:395961 CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677
InParanoid:O42101 KO:K08027 OrthoDB:EOG470TH1 NextBio:20816026
Uniprot:O42101
Length = 501
Score = 289 (106.8 bits), Expect = 5.5e-44, Sum P(2) = 5.5e-44
Identities = 70/200 (35%), Positives = 119/200 (59%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATNI-CKATDKQLFQLVDWAKHIPHFTTLPLE 212
P E ++A+ ++QE A++ + + CK D+ LF +V+WA+ F L ++
Sbjct: 273 PDEPQVQAKIMAYLQQEQANRSKHEKLNTFGLMCKMADQTLFSIVEWARSSIFFRELKVD 332
Query: 213 DQVLLLRAGWNELLIASFSHRSI-SVKDG-ILLAPGVTV-YRSSAHEAG--VGGIFDRVL 267
DQ+ LL+ W+ELLI +R + VK+G ILL G V Y A +AG + +
Sbjct: 333 DQMKLLQNCWSELLILDHIYRQVVHVKEGSILLVTGQQVDYSVIASQAGATLNNLMSHA- 391
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
ELV+K+R ++ D E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+ +
Sbjct: 392 QELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQ 451
Query: 328 EPGRFAKLLLRLPSLRSIEV 347
+ +F +LLLRLP +R+I +
Sbjct: 452 QTDKFGQLLLRLPEIRAISM 471
Score = 201 (75.8 bits), Expect = 5.5e-44, Sum P(2) = 5.5e-44
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E +NC ID
Sbjct: 43 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCR 102
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GMK EAV+ +R R
Sbjct: 103 FQKCLSVGMKLEAVRADRMR 122
>UNIPROTKB|Q9TTF0 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820 HSSP:P19793
eggNOG:NOG277339 EMBL:AF107729 IPI:IPI00954760 UniGene:Bt.241
STRING:Q9TTF0 InParanoid:Q9TTF0 OrthoDB:EOG41C6WF Uniprot:Q9TTF0
Length = 411
Score = 278 (102.9 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 59/163 (36%), Positives = 94/163 (57%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
+I + + + LF V WAK++P F+ LP DQV+LL W+EL + S+ + + LL
Sbjct: 220 SIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPLDNCPLL 279
Query: 244 A-PGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
A P + SS + R+L E +S+ R + +D TE C++ ++LF P+ RGLK
Sbjct: 280 ALPEASAGGSSQGRLVLASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLKD 339
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ VE L+++ L ++++ +H + RF KLLL LPSLR I
Sbjct: 340 PEHVEALQDQSQVMLSQHSKAHHPSQLVRFGKLLLLLPSLRFI 382
Score = 199 (75.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 40/91 (43%), Positives = 52/91 (57%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXXX 116
C +CGD +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 39 CRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLK 98
Query: 117 XXLNMGMKREAVQEERQ--RTKERDSNEVES 145
L GM ++AVQ ERQ T + + VES
Sbjct: 99 KCLQAGMNQDAVQNERQPRSTAQVRMDSVES 129
>UNIPROTKB|B4E2P3 [details] [associations]
symbol:NR5A2 "cDNA FLJ52395, highly similar to Orphan
nuclear receptor NR5A2" species:9606 "Homo sapiens" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008206
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0042632 GO:GO:0042127 GO:GO:0030522
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 UniGene:Hs.33446 HGNC:HGNC:7984 EMBL:AC096633
EMBL:AK304365 EMBL:AK316513 IPI:IPI01009507 SMR:B4E2P3
STRING:B4E2P3 Ensembl:ENST00000544748 Uniprot:B4E2P3
Length = 469
Score = 283 (104.7 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 70/201 (34%), Positives = 122/201 (60%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATN--ICKATDKQLFQLVDWAKHIPHFTTLPL 211
P E ++A+ ++QE A++ +E+ +T +CK D+ LF +V+WA+ F L +
Sbjct: 241 PDEPQVQAKIMAYLQQEQANRS-KHEKLSTFGLMCKMADQTLFSIVEWARSSIFFRELKV 299
Query: 212 EDQVLLLRAGWNELLIASFSHRSI-SVKDG-ILLAPGVTV-YRSSAHEAG--VGGIFDRV 266
+DQ+ LL+ W+ELLI +R + K+G I L G V Y A +AG + +
Sbjct: 300 DDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMSHA 359
Query: 267 LTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
ELV+K+R ++ D+ E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+
Sbjct: 360 -QELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYP 418
Query: 327 EEPGRFAKLLLRLPSLRSIEV 347
++ +F +LLLRLP +R+I +
Sbjct: 419 QQTEKFGQLLLRLPEIRAISM 439
Score = 201 (75.8 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E +NC ID
Sbjct: 11 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCR 70
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GMK EAV+ +R R
Sbjct: 71 FQKCLSVGMKLEAVRADRMR 90
>UNIPROTKB|F1NVB5 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008206
"bile acid metabolic process" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045070 "positive regulation
of viral genome replication" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0008206 GO:GO:0005543
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0045070 GeneTree:ENSGT00670000097927
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00679374 OMA:NTFGLMC
EMBL:AADN02033799 EMBL:AADN02033800 EMBL:AADN02033801
EMBL:AADN02033802 EMBL:AADN02033803 Ensembl:ENSGALT00000003418
ArrayExpress:F1NVB5 Uniprot:F1NVB5
Length = 501
Score = 282 (104.3 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 69/200 (34%), Positives = 118/200 (59%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATNI-CKATDKQLFQLVDWAKHIPHFTTLPLE 212
P E ++A+ ++QE A++ + + CK D+ LF +V+WA+ F L ++
Sbjct: 273 PDEPQVQAKIMAYLQQEQANRSKHEKLNTFGLMCKMADQTLFSIVEWARSSIFFRELKVD 332
Query: 213 DQVLLLRAGWNELLIASFSHRSI-SVKDG-ILLAPGVTV-YRSSAHEAG--VGGIFDRVL 267
DQ+ LL+ W+ELLI +R + K+G ILL G V Y A +AG + +
Sbjct: 333 DQMKLLQNCWSELLILDHIYRQVVHGKEGSILLVTGQQVDYSVIASQAGATLNNLMSHA- 391
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
ELV+K+R ++ D E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+ +
Sbjct: 392 QELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQ 451
Query: 328 EPGRFAKLLLRLPSLRSIEV 347
+ +F +LLLRLP +R+I +
Sbjct: 452 QTDKFGQLLLRLPEIRAISM 471
Score = 201 (75.8 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E +NC ID
Sbjct: 43 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCR 102
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GMK EAV+ +R R
Sbjct: 103 FQKCLSVGMKLEAVRADRMR 122
>UNIPROTKB|F1PXN4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
OMA:NTFGLMC EMBL:AAEX03005037 Ensembl:ENSCAFT00000017785
Uniprot:F1PXN4
Length = 519
Score = 283 (104.7 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 70/201 (34%), Positives = 122/201 (60%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATN--ICKATDKQLFQLVDWAKHIPHFTTLPL 211
P E ++A+ ++QE A++ +E+ +T +CK D+ LF +V+WA+ F L +
Sbjct: 291 PDEPQVQAKIMAYLQQEQANRS-KHEKLSTFGLMCKMADQTLFSIVEWARSSIFFRELKV 349
Query: 212 EDQVLLLRAGWNELLIASFSHRSI-SVKDG-ILLAPGVTV-YRSSAHEAG--VGGIFDRV 266
+DQ+ LL+ W+ELLI +R + K+G I L G V Y A +AG + +
Sbjct: 350 DDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMSHA 409
Query: 267 LTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
ELV+K+R ++ D+ E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+
Sbjct: 410 -QELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYP 468
Query: 327 EEPGRFAKLLLRLPSLRSIEV 347
++ +F +LLLRLP +R+I +
Sbjct: 469 QQTEKFGQLLLRLPEIRAISM 489
Score = 201 (75.8 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E +NC ID
Sbjct: 61 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCR 120
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GMK EAV+ +R R
Sbjct: 121 FQKCLSVGMKLEAVRADRMR 140
>UNIPROTKB|O00482 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0009790 "embryo
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0042592
"homeostatic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045070 "positive regulation of viral
genome replication" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0008206 GO:GO:0005543 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
EMBL:CH471067 GO:GO:0042632 GO:GO:0003705 GO:GO:0042127
GO:GO:0009790 GO:GO:0044212 GO:GO:0006367 GO:GO:0042592
GO:GO:0045070 PDB:3TX7 PDBsum:3TX7 eggNOG:NOG240365 PDB:1YOK
PDB:1ZDU PDB:3PLZ PDB:4DOS PDBsum:1YOK PDBsum:1ZDU PDBsum:3PLZ
PDBsum:4DOS InterPro:IPR016355 PIRSF:PIRSF002530 PDB:1YUC PDB:4DOR
PDBsum:1YUC PDBsum:4DOR CTD:2494 HOGENOM:HOG000063718
HOVERGEN:HBG106677 KO:K08027 OrthoDB:EOG470TH1 EMBL:U80251
EMBL:AF146343 EMBL:AF124247 EMBL:AF190464 EMBL:BC118571
EMBL:BC118652 EMBL:U93553 IPI:IPI00011769 IPI:IPI00217284
IPI:IPI00217285 RefSeq:NP_003813.1 RefSeq:NP_995582.1
UniGene:Hs.33446 PDB:2A66 PDBsum:2A66 ProteinModelPortal:O00482
SMR:O00482 DIP:DIP-37952N IntAct:O00482 MINT:MINT-2997724
STRING:O00482 PhosphoSite:O00482 PRIDE:O00482
Ensembl:ENST00000236914 Ensembl:ENST00000367362 GeneID:2494
KEGG:hsa:2494 UCSC:uc001gvb.3 GeneCards:GC01P199996 HGNC:HGNC:7984
HPA:HPA005455 HPA:HPA017067 MIM:604453 neXtProt:NX_O00482
PharmGKB:PA31765 InParanoid:O00482 OMA:NTFGLMC PhylomeDB:O00482
BindingDB:O00482 ChEMBL:CHEMBL3544 EvolutionaryTrace:O00482
GenomeRNAi:2494 NextBio:9851 ArrayExpress:O00482 Bgee:O00482
CleanEx:HS_NR5A2 Genevestigator:O00482 GermOnline:ENSG00000116833
Uniprot:O00482
Length = 541
Score = 283 (104.7 bits), Expect = 4.9e-43, Sum P(2) = 4.9e-43
Identities = 70/201 (34%), Positives = 122/201 (60%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATN--ICKATDKQLFQLVDWAKHIPHFTTLPL 211
P E ++A+ ++QE A++ +E+ +T +CK D+ LF +V+WA+ F L +
Sbjct: 313 PDEPQVQAKIMAYLQQEQANRS-KHEKLSTFGLMCKMADQTLFSIVEWARSSIFFRELKV 371
Query: 212 EDQVLLLRAGWNELLIASFSHRSI-SVKDG-ILLAPGVTV-YRSSAHEAG--VGGIFDRV 266
+DQ+ LL+ W+ELLI +R + K+G I L G V Y A +AG + +
Sbjct: 372 DDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGATLNNLMSHA 431
Query: 267 LTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
ELV+K+R ++ D+ E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+
Sbjct: 432 -QELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYP 490
Query: 327 EEPGRFAKLLLRLPSLRSIEV 347
++ +F +LLLRLP +R+I +
Sbjct: 491 QQTEKFGQLLLRLPEIRAISM 511
Score = 201 (75.8 bits), Expect = 4.9e-43, Sum P(2) = 4.9e-43
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E +NC ID
Sbjct: 83 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCR 142
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GMK EAV+ +R R
Sbjct: 143 FQKCLSVGMKLEAVRADRMR 162
>ZFIN|ZDB-GENE-040702-6 [details] [associations]
symbol:nr5a1b "nuclear receptor subfamily 5, group A,
member 1b" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040702-6 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 EMBL:AL772368
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:FP016184 EMBL:FP085418 EMBL:BC162252
EMBL:BC162260 EMBL:AY212920 IPI:IPI00497101 RefSeq:NP_997999.1
UniGene:Dr.30454 HSSP:P45448 SMR:Q800U8 Ensembl:ENSDART00000028265
GeneID:405759 KEGG:dre:405759 CTD:405759 InParanoid:Q800U8
OMA:YCITANS OrthoDB:EOG4P2Q2C NextBio:20817729 Uniprot:Q800U8
Length = 502
Score = 282 (104.3 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
Identities = 64/166 (38%), Positives = 102/166 (61%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSI--SVKDGIL 242
+C D+ LF +V+WA+ F L + DQ+ LL W+ELL+ + R + +D +L
Sbjct: 304 MCHMADQTLFSIVEWARSCIFFKELKVGDQMKLLHNCWSELLVLDYVARQLHHGKEDSVL 363
Query: 243 LAPGVTVYRSSA-HEAGV--GGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRG 299
L G V +S +AGV G+ R ELV +++E+++D+ E CL+ +ILFNPDV+
Sbjct: 364 LITGQEVELASLLAQAGVTLSGMIQRG-QELVQRLQELQLDRRETACLKYLILFNPDVKL 422
Query: 300 LKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
L++Q VE + E+V +L EYT + + P RF+++LLRLP LR++
Sbjct: 423 LENQPYVESVYEQVNAALLEYTLCAYPQFPDRFSQILLRLPELRAL 468
Score = 198 (74.8 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ +C +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 10 EEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKTQRKRCPFCR 69
Query: 115 XXXXLNMGMKREAVQEERQR 134
LN+GM+ EAV+ +R R
Sbjct: 70 FQKCLNVGMRLEAVRADRMR 89
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 314 YTSLEEYTRVNHSEE-PG 330
YTS E YT + E PG
Sbjct: 205 YTSSEHYTSASSPESVPG 222
>UNIPROTKB|Q7SIF6 [details] [associations]
symbol:Q7SIF6 "Gene regulation protein" species:7102
"Heliothis virescens" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR00545
SMART:SM00430 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 PDB:1R1K PDB:1R20 PDB:2R40 PDBsum:1R1K PDBsum:1R20
PDBsum:2R40 PDB:1G2N PDB:3IXP PDBsum:1G2N PDBsum:3IXP
ProteinModelPortal:Q7SIF6 SMR:Q7SIF6 IntAct:Q7SIF6
EvolutionaryTrace:Q7SIF6 Uniprot:Q7SIF6
Length = 264
Score = 310 (114.2 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 64/116 (55%), Positives = 88/116 (75%)
Query: 232 HRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTII 291
+R+ S + L PG+T++R+SA +AGVG IFDRVL+EL KMR +++D+ E L+ II
Sbjct: 112 NRTTSPPQLMCLMPGMTLHRNSALQAGVGQIFDRVLSELSLKMRTLRVDQAEYVALKAII 171
Query: 292 LFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSIEV 347
L NPDV+GLK++Q VE+LREK++ L+EY R + S E GRFA LLLRLP+LRSI +
Sbjct: 172 LLNPDVKGLKNRQEVEVLREKMFLCLDEYCRRSRSSEEGRFAALLLRLPALRSISL 227
Score = 158 (60.7 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/103 (35%), Positives = 63/103 (61%)
Query: 152 EMPVERILEAEQRV-DMKQE------PADQDIVNEQQA--TNICKATDKQLFQLVDWAKH 202
E+ +ER+LE E V D +E D ++ + +A +++C+ +KQ+ LV WA+
Sbjct: 5 ELSIERLLEMESLVADPSEEFQFLRVGPDSNVPPKFRAPVSSLCQIGNKQIAALVVWARD 64
Query: 203 IPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISV----KDGI 241
IPHF+ L +EDQ+LL++ WNELL+ + + RS+ +DG+
Sbjct: 65 IPHFSQLEMEDQILLIKGSWNELLLFAIAWRSMEFLTEERDGV 107
>UNIPROTKB|F1MCM4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0042632
GO:GO:0042127 GO:GO:0044212 GO:GO:0045070
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 KO:K08027 OMA:NTFGLMC EMBL:DAAA02043946 EMBL:DAAA02043947
EMBL:DAAA02043948 EMBL:DAAA02043949 EMBL:DAAA02043950
EMBL:DAAA02043951 IPI:IPI01004030 RefSeq:NP_001193745.1
UniGene:Bt.107646 UniGene:Bt.10845 UniGene:Bt.97978
Ensembl:ENSBTAT00000012207 GeneID:541305 KEGG:bta:541305
NextBio:20879130 ArrayExpress:F1MCM4 Uniprot:F1MCM4
Length = 541
Score = 279 (103.3 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 69/201 (34%), Positives = 122/201 (60%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATN--ICKATDKQLFQLVDWAKHIPHFTTLPL 211
P E ++A+ ++QE A++ +E+ +T +CK D+ LF +V+WA+ F L +
Sbjct: 313 PDEPQVQAKIMAYLQQEQANRG-KHERLSTFGLMCKMADQTLFSIVEWARSSVFFRELKV 371
Query: 212 EDQVLLLRAGWNELLIASFSHRSI-SVKDG-ILLAPGVTV-YRSSAHEAG--VGGIFDRV 266
+DQ+ LL+ W+ELLI +R + K+G I L G V Y A +AG + +
Sbjct: 372 DDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSVIASQAGATLNNLMSHA 431
Query: 267 LTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
ELV+K+R ++ D+ E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+
Sbjct: 432 -QELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTVCNYP 490
Query: 327 EEPGRFAKLLLRLPSLRSIEV 347
++ +F +LLLRLP +R++ +
Sbjct: 491 QQTEKFGQLLLRLPEIRALSM 511
Score = 201 (75.8 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E +NC ID
Sbjct: 83 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCR 142
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GMK EAV+ +R R
Sbjct: 143 FQKCLSVGMKLEAVRADRMR 162
>ZFIN|ZDB-GENE-030131-4652 [details] [associations]
symbol:nr5a5 "nuclear receptor subfamily 5, group
A, member 5" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-4652 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HSSP:P03372 InterPro:IPR016355 PIRSF:PIRSF002530 HOVERGEN:HBG106677
EMBL:AF327373 IPI:IPI00508517 RefSeq:NP_999944.1 UniGene:Dr.11921
ProteinModelPortal:Q98ST8 SMR:Q98ST8 GeneID:407626 KEGG:dre:407626
CTD:407626 InParanoid:Q98ST8 NextBio:20818501 ArrayExpress:Q98ST8
Uniprot:Q98ST8
Length = 537
Score = 283 (104.7 bits), Expect = 4.1e-42, Sum P(2) = 4.1e-42
Identities = 61/168 (36%), Positives = 106/168 (63%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISV-KDG-IL 242
+CK D+ LF LV+WA++ F L ++DQ++LL++ W+ELL+ R ++ +DG I
Sbjct: 341 MCKMADQTLFGLVEWARNCELFKELKVDDQMVLLQSCWSELLVLDHLCRQVAYGRDGSIC 400
Query: 243 LAPGVTVYRSSA-HEAGV--GGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRG 299
L G + S+ +AGV + R +LV+K+R +++D+ E CL+ ++LFNPDV+
Sbjct: 401 LITGQQIEASTILSQAGVTLSSLVSRA-QDLVTKLRSLQLDREEFVCLKYLVLFNPDVKS 459
Query: 300 LKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSIEV 347
+++++ VE +E+V +L ++T H +F +LLLRLP +RSI +
Sbjct: 460 VQNRRQVEQTQERVNKALMDHTMQTHPGHSDKFGQLLLRLPEVRSISL 507
Score = 192 (72.6 bits), Expect = 4.1e-42, Sum P(2) = 4.1e-42
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGDR SG HYG+ +CE CKGFFKR+V+ + Y C E +NC +D
Sbjct: 51 CPVCGDRVSGYHYGLLTCESCKGFFKRSVQNNKRYTCAEAQNCPMDLAQRKRCPYCRFQK 110
Query: 118 XLNMGMKREAVQEERQR 134
+ +GMK+EAV+ +R R
Sbjct: 111 CVAVGMKKEAVRADRMR 127
>ZFIN|ZDB-GENE-990415-79 [details] [associations]
symbol:nr5a2 "nuclear receptor subfamily 5, group A,
member 2" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS;IDA] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-79 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0051216
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 HSSP:P45448 EMBL:AL954148
EMBL:BC163522 EMBL:AY034061 IPI:IPI00511047 UniGene:Dr.6870
SMR:Q90YL6 STRING:Q90YL6 Ensembl:ENSDART00000127424
InParanoid:Q90YL6 Uniprot:Q90YL6
Length = 517
Score = 279 (103.3 bits), Expect = 8.8e-42, Sum P(2) = 8.8e-42
Identities = 69/201 (34%), Positives = 118/201 (58%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATNI-CKATDKQLFQLVDWAKHIPHFTTLPLE 212
P E ++A+ ++QE A + + + CK D+ LF +V+WA+ F L ++
Sbjct: 289 PDEPQVQAKILAYLQQEQASRGKHEKLNTFGLMCKMADQTLFSIVEWARSSIFFRELKVD 348
Query: 213 DQVLLLRAGWNELLIASFSHRSIS-VKDG-ILLAPGVTV-YRSSAHEAGVGGIFDRVLT- 268
DQ+ LL+ W+ELLI R + K+G ILL G V Y A +AG + +L+
Sbjct: 349 DQMKLLQNCWSELLILDHVFRQVMHAKEGSILLVTGQQVDYALIASQAGA--TLNNLLSH 406
Query: 269 --ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
ELVSK+R +++D+ E CL+ ++LF+ DV+ L++ +VE ++E+V +L +Y N+
Sbjct: 407 AQELVSKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLVESVQEQVNAALLDYVMCNYP 466
Query: 327 EEPGRFAKLLLRLPSLRSIEV 347
++ +F +LLLRLP +R+I +
Sbjct: 467 QQTDKFGQLLLRLPEIRAISL 487
Score = 192 (72.6 bits), Expect = 8.8e-42, Sum P(2) = 8.8e-42
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
+C +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 45 MCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQSCQIDKTQRKRCPYCRFQ 104
Query: 117 XXLNMGMKREAVQEERQR 134
L +GMK EAV+ +R R
Sbjct: 105 KCLTVGMKLEAVRADRMR 122
>MGI|MGI:1346834 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005543
"phospholipid binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0008206 "bile acid metabolic process" evidence=IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Reactome:REACT_13641 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1346834 GO:GO:0005829 GO:GO:0005634
GO:GO:0008206 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018 GO:GO:0045070
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 PDB:3F5C PDBsum:3F5C PDB:1ZH7 PDBsum:1ZH7
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:M81385 EMBL:BC137845
IPI:IPI00129665 PIR:S27874 RefSeq:NP_109601.1 UniGene:Mm.16794
PDB:1PK5 PDBsum:1PK5 ProteinModelPortal:P45448 SMR:P45448
STRING:P45448 PhosphoSite:P45448 PRIDE:P45448
Ensembl:ENSMUST00000027649 GeneID:26424 KEGG:mmu:26424
UCSC:uc007cvc.2 InParanoid:P45448 EvolutionaryTrace:P45448
NextBio:304453 Bgee:P45448 CleanEx:MM_NR5A2 Genevestigator:P45448
GermOnline:ENSMUSG00000026398 Uniprot:P45448
Length = 560
Score = 273 (101.2 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 66/198 (33%), Positives = 119/198 (60%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATNI-CKATDKQLFQLVDWAKHIPHFTTLPLE 212
P E ++A+ ++QE ++++ + A + CK D+ LF +V+WA+ F L ++
Sbjct: 332 PDEPQVQAKIMAYLQQEQSNRNRQEKLSAFGLLCKMADQTLFSIVEWARSSIFFRELKVD 391
Query: 213 DQVLLLRAGWNELLIASFSHRSISV-KDG-ILLAPGVTVYRSS--AH-EAGVGGIFDRVL 267
DQ+ LL+ W+ELLI +R ++ K+G I L G V S+ +H E + +
Sbjct: 392 DQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSTIISHTEVAFNNLLS-LA 450
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
ELV ++R ++ D+ E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+ +
Sbjct: 451 QELVVRLRSLQFDQREFVCLKFLVLFSSDVKNLENLQLVEGVQEQVNAALLDYTVCNYPQ 510
Query: 328 EPGRFAKLLLRLPSLRSI 345
+ +F +LLLRLP +R+I
Sbjct: 511 QTEKFGQLLLRLPEIRAI 528
Score = 198 (74.8 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E +NC ID
Sbjct: 104 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCPYCR 163
Query: 115 XXXXLNMGMKREAVQEERQR 134
+++GMK EAV+ +R R
Sbjct: 164 FKKCIDVGMKLEAVRADRMR 183
>RGD|68353 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005543
"phospholipid binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0008206 "bile acid metabolic process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:68353 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0003690 GO:GO:0045070 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:AB012960 EMBL:AB012961
IPI:IPI00212414 IPI:IPI00212417 RefSeq:NP_068510.1 UniGene:Rn.42941
ProteinModelPortal:Q9QWM1 SMR:Q9QWM1 STRING:Q9QWM1
PhosphoSite:Q9QWM1 Ensembl:ENSRNOT00000000811
Ensembl:ENSRNOT00000000812 GeneID:60349 KEGG:rno:60349
UCSC:RGD:68353 InParanoid:Q9QWM1 NextBio:612007
Genevestigator:Q9QWM1 GermOnline:ENSRNOG00000000653 Uniprot:Q9QWM1
Length = 560
Score = 273 (101.2 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 68/199 (34%), Positives = 119/199 (59%)
Query: 154 PVERILEAEQRVDMKQEPADQDIVNEQQATNI-CKATDKQLFQLVDWAKHIPHFTTLPLE 212
P E ++A+ ++QE +++ + A + CK D+ LF +V+WA+ F L ++
Sbjct: 332 PDEPQVQAKIMAYLQQEQNNRNRQEKLSAFGLLCKMADQTLFSIVEWARSSIFFRELKVD 391
Query: 213 DQVLLLRAGWNELLIASFSHRSISV-KDG-ILLAPGVTV-YRSSAHEAGVGGIFDRVLT- 268
DQ+ LL+ W+ELLI +R ++ K+G I L G V Y S V F+ +L+
Sbjct: 392 DQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYSSIISNTEVA--FNNLLSL 449
Query: 269 --ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
ELV ++R ++ D+ E CL+ ++LF+ DV+ L++ Q+VE ++E+V +L +YT N+
Sbjct: 450 AQELVVRLRSLQFDQREFVCLKFLVLFSSDVKNLENFQLVEGVQEQVNAALLDYTLCNYP 509
Query: 327 EEPGRFAKLLLRLPSLRSI 345
++ +F +LLLRLP +R+I
Sbjct: 510 QQTEKFGQLLLRLPEIRAI 528
Score = 198 (74.8 bits), Expect = 1.6e-41, Sum P(2) = 1.6e-41
Identities = 36/80 (45%), Positives = 48/80 (60%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C E +NC ID
Sbjct: 104 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCPYCR 163
Query: 115 XXXXLNMGMKREAVQEERQR 134
+++GMK EAV+ +R R
Sbjct: 164 FKKCIDVGMKLEAVRADRMR 183
>UNIPROTKB|F1P0M4 [details] [associations]
symbol:NR2E3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0045872 "positive regulation of
rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0030522 OMA:MLSQHTK EMBL:AADN02051066 IPI:IPI00600137
Ensembl:ENSGALT00000003264 Uniprot:F1P0M4
Length = 405
Score = 251 (93.4 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 55/160 (34%), Positives = 89/160 (55%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILL 243
N+ + + LF V WAK++P F+ LP DQV+LL W+EL + S+ ++ LL
Sbjct: 219 NVYETSPLLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLCAIQWSMPLESCPLL 278
Query: 244 APGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQ 303
A V S + + R L E + + + + +D TE C++ ++LF P+ RGLK
Sbjct: 279 A----VPEPSPGKLLPAAVDVRALQETLGRFKALAVDPTEFACMKAVVLFKPETRGLKDP 334
Query: 304 QVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
+ VE L+++ L ++ R ++ +P RF KLLL LP+LR
Sbjct: 335 EQVENLQDQSQVMLGQHNRSHYPGQPVRFGKLLLLLPALR 374
Score = 211 (79.3 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 44/104 (42%), Positives = 58/104 (55%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXX 115
LC +CGD +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 34 LCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGLCPVDKAHRNQCQACRL 93
Query: 116 XXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL-IEMPVERI 158
L GM ++AVQ ERQ R + +V S L E+P E +
Sbjct: 94 KKCLQAGMNKDAVQNERQ---PRSTAQVRLDSIELDAELPPEHV 134
>ZFIN|ZDB-GENE-040801-127 [details] [associations]
symbol:nr2e1 "nuclear receptor subfamily 2, group
E, member 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040801-127 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GeneTree:ENSGT00700000104390 eggNOG:NOG277339
KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q OMA:ILLEDAW EMBL:CU138515
EMBL:BC077146 EMBL:EF010862 IPI:IPI00504614 RefSeq:NP_001003608.1
UniGene:Dr.78647 STRING:Q6DEH0 Ensembl:ENSDART00000026635
GeneID:445214 KEGG:dre:445214 NextBio:20831976 Uniprot:Q6DEH0
Length = 396
Score = 253 (94.1 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 55/177 (31%), Positives = 95/177 (53%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TLPL DQ++LL W EL + + +I V
Sbjct: 190 EVATESVCESAARLLFMSIKWAKSVPAFSTLPLPDQLILLEDAWRELFVLGIAQWAIPVD 249
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 250 SSTLLAVSGMNTENTDSQR--LNKIISEIQALQEVVTRFRQLRLDATEFACLKCIVTFKA 307
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRS+
Sbjct: 308 VPTHSGSELRSFRNASAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSV 364
Score = 200 (75.5 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 27 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQGGCPVDKTHRNQCRACRL 86
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 87 KKCLEVNMNKDAVQHER 103
>UNIPROTKB|Q5UKY7 [details] [associations]
symbol:ESRRG "Nuclear receptor subfamily 3 group B member
3" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005496
"steroid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 CTD:2104 KO:K08554 EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107 EMBL:AY702438
IPI:IPI00601951 RefSeq:NP_001007082.1 UniGene:Gga.11217 SMR:Q5UKY7
STRING:Q5UKY7 Ensembl:ENSGALT00000015707 GeneID:421357
KEGG:gga:421357 InParanoid:Q5UKY7 NextBio:20824134 Uniprot:Q5UKY7
Length = 435
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 102 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 161
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 162 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 221
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 222 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 278
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 279 QSAWMEILILGVVYRSLSFEDELVYAEDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 337
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 338 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 397
Query: 339 LPSLR 343
LP LR
Sbjct: 398 LPLLR 402
>UNIPROTKB|E1BC39 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00700000104391 GO:GO:0003708
OMA:RMSSKDR EMBL:DAAA02042485 EMBL:DAAA02042486 EMBL:DAAA02042487
IPI:IPI00685955 Ensembl:ENSBTAT00000061126 Uniprot:E1BC39
Length = 450
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 117 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 176
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 177 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 236
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 237 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 293
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 294 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 352
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 353 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 412
Query: 339 LPSLR 343
LP LR
Sbjct: 413 LPLLR 417
>UNIPROTKB|E2R7U1 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 OMA:RMSSKDR EMBL:AAEX03018324
RefSeq:XP_849276.1 ProteinModelPortal:E2R7U1
Ensembl:ENSCAFT00000017132 GeneID:478961 KEGG:cfa:478961
BindingDB:E2R7U1 NextBio:20854219 Uniprot:E2R7U1
Length = 458
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 125 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 184
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 185 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 244
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 245 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 302 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 360
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 361 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 420
Query: 339 LPSLR 343
LP LR
Sbjct: 421 LPLLR 425
>UNIPROTKB|J9NWD9 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AAEX03018324 GeneID:478961
KEGG:cfa:478961 RefSeq:XP_003434352.1 ProteinModelPortal:J9NWD9
Ensembl:ENSCAFT00000046515 Uniprot:J9NWD9
Length = 435
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 102 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 161
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 162 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 221
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 222 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 278
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 279 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 337
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 338 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 397
Query: 339 LPSLR 343
LP LR
Sbjct: 398 LPLLR 402
>UNIPROTKB|P62508 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0050682 "AF-2 domain binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0045893 GO:GO:0005654 EMBL:CH471100 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367
DrugBank:DB00255 eggNOG:NOG282629 HOVERGEN:HBG108344 EMBL:AF094518
EMBL:AB020639 EMBL:AF058291 EMBL:AY388456 EMBL:AY388457
EMBL:AY388458 EMBL:AY388459 EMBL:AY388460 EMBL:AY388461
EMBL:AK131193 EMBL:AK290945 EMBL:AK291028 EMBL:AK291647
EMBL:CR749497 EMBL:AY528719 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 EMBL:BC008218 EMBL:BC064700
EMBL:AF117255 IPI:IPI00025743 IPI:IPI00427737 IPI:IPI00554597
IPI:IPI00940244 RefSeq:NP_001127757.1 RefSeq:NP_001230434.1
RefSeq:NP_001230435.1 RefSeq:NP_001230436.1 RefSeq:NP_001230438.1
RefSeq:NP_001230439.1 RefSeq:NP_001230440.1 RefSeq:NP_001230441.1
RefSeq:NP_001230442.1 RefSeq:NP_001230443.1 RefSeq:NP_001230444.1
RefSeq:NP_001230447.1 RefSeq:NP_001230448.1 RefSeq:NP_001429.2
RefSeq:NP_996317.1 RefSeq:NP_996318.1 UniGene:Hs.444225
UniGene:Hs.738938 PDB:1KV6 PDB:1TFC PDB:1VJB PDB:2E2R PDB:2EWP
PDB:2GP7 PDB:2GPO PDB:2GPP PDB:2GPU PDB:2GPV PDB:2P7A PDB:2P7G
PDB:2P7Z PDB:2ZAS PDB:2ZBS PDB:2ZKC PDBsum:1KV6 PDBsum:1TFC
PDBsum:1VJB PDBsum:2E2R PDBsum:2EWP PDBsum:2GP7 PDBsum:2GPO
PDBsum:2GPP PDBsum:2GPU PDBsum:2GPV PDBsum:2P7A PDBsum:2P7G
PDBsum:2P7Z PDBsum:2ZAS PDBsum:2ZBS PDBsum:2ZKC
ProteinModelPortal:P62508 SMR:P62508 IntAct:P62508
MINT:MINT-4824700 STRING:P62508 PhosphoSite:P62508 DMDM:50402102
PRIDE:P62508 DNASU:2104 Ensembl:ENST00000359162
Ensembl:ENST00000360012 Ensembl:ENST00000361395
Ensembl:ENST00000361525 Ensembl:ENST00000366938
Ensembl:ENST00000366940 Ensembl:ENST00000391890
Ensembl:ENST00000408911 Ensembl:ENST00000463665
Ensembl:ENST00000487276 Ensembl:ENST00000493603
Ensembl:ENST00000493748 GeneID:2104 KEGG:hsa:2104 UCSC:uc001hkw.2
CTD:2104 GeneCards:GC01M216676 HGNC:HGNC:3474 HPA:HPA044678
MIM:602969 neXtProt:NX_P62508 PharmGKB:PA27891 InParanoid:P62508
KO:K08554 BindingDB:P62508 ChEMBL:CHEMBL4245 ChiTaRS:ESRRG
EvolutionaryTrace:P62508 GenomeRNAi:2104 NextBio:8511
ArrayExpress:P62508 Bgee:P62508 Genevestigator:P62508
GermOnline:ENSG00000196482 GO:GO:0050682 GO:GO:0003708
Uniprot:P62508
Length = 458
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 125 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 184
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 185 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 244
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 245 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 302 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 360
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 361 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 420
Query: 339 LPSLR 343
LP LR
Sbjct: 421 LPLLR 425
>MGI|MGI:1347056 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=NAS] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1347056
GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496
GO:GO:0046872 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0005516 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AF117254 EMBL:AB093266
EMBL:AK052731 EMBL:BC082324 IPI:IPI00453754 IPI:IPI00468998
RefSeq:NP_001230721.1 RefSeq:NP_036065.1 UniGene:Mm.388156
UniGene:Mm.421613 UniGene:Mm.89989 PDB:1S9P PDB:1S9Q PDBsum:1S9P
PDBsum:1S9Q ProteinModelPortal:P62509 SMR:P62509 IntAct:P62509
STRING:P62509 PhosphoSite:P62509 PRIDE:P62509
Ensembl:ENSMUST00000027906 Ensembl:ENSMUST00000110938
Ensembl:ENSMUST00000110939 GeneID:26381 KEGG:mmu:26381
UCSC:uc007eaa.1 UCSC:uc007eab.1 InParanoid:P62509 OMA:RMSSKDR
BindingDB:P62509 NextBio:304297 Bgee:P62509 CleanEx:MM_ESRRG
Genevestigator:P62509 GermOnline:ENSMUSG00000026610 Uniprot:P62509
Length = 458
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 125 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 184
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 185 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 244
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 245 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 302 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 360
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 361 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 420
Query: 339 LPSLR 343
LP LR
Sbjct: 421 LPLLR 425
>RGD|1303236 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0050682 "AF-2 domain binding"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1303236
GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 DrugBank:DB00255 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71 CTD:2104 KO:K08554
GO:GO:0050682 GO:GO:0003708 OMA:RMSSKDR EMBL:AB126962 EMBL:AB126963
EMBL:AY341057 IPI:IPI00421426 IPI:IPI00454520 RefSeq:NP_976081.1
UniGene:Rn.214491 ProteinModelPortal:P62510 SMR:P62510
STRING:P62510 PhosphoSite:P62510 PRIDE:P62510
Ensembl:ENSRNOT00000003489 GeneID:360896 KEGG:rno:360896
UCSC:RGD:1303236 InParanoid:P62510 BindingDB:P62510 NextBio:674519
Genevestigator:P62510 GermOnline:ENSRNOG00000002593 Uniprot:P62510
Length = 458
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 103/305 (33%), Positives = 164/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 125 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 184
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 185 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 244
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 245 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 301
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 302 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 360
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ I L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+
Sbjct: 361 LEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMT 420
Query: 339 LPSLR 343
LP LR
Sbjct: 421 LPLLR 425
>MGI|MGI:1100526 [details] [associations]
symbol:Nr2e1 "nuclear receptor subfamily 2, group E, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0001662 "behavioral fear response" evidence=IMP] [GO:0002118
"aggressive behavior" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007610
"behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021542 "dentate gyrus development" evidence=IMP] [GO:0021764
"amygdala development" evidence=IMP] [GO:0021772 "olfactory bulb
development" evidence=IMP] [GO:0021819 "layer formation in cerebral
cortex" evidence=IMP] [GO:0021872 "forebrain generation of neurons"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IMP] [GO:0021960 "anterior commissure morphogenesis"
evidence=IMP] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IGI] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IMP] [GO:0045766 "positive
regulation of angiogenesis" evidence=IMP] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IMP] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IMP] [GO:0051128 "regulation of cellular component
organization" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0060164 "regulation of timing of
neuron differentiation" evidence=IMP] [GO:0060291 "long-term
synaptic potentiation" evidence=IMP] [GO:0090049 "regulation of
cell migration involved in sprouting angiogenesis" evidence=IMP]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IMP] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1100526 GO:GO:0005634
GO:GO:0043066 GO:GO:0046872 GO:GO:0003677 GO:GO:0060291
GO:GO:0007601 GO:GO:0001078 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045665 GO:GO:0045766 GO:GO:0001077
GO:GO:0048814 GO:GO:0060041 GO:GO:0035176 GO:GO:0035019
GO:GO:0001662 GO:GO:0045165 GO:GO:0008347 GO:GO:0045787
GO:GO:2000179 GO:GO:0048712 GO:GO:0021960 GO:GO:0021542
GO:GO:2000178 GO:GO:0002118 GO:GO:0021772 GO:GO:0021819
HOGENOM:HOG000260820 HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895
GO:GO:0060164 eggNOG:NOG277339 KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 EMBL:S77482 EMBL:BC057104
IPI:IPI00131076 RefSeq:NP_689415.1 UniGene:Mm.287100
ProteinModelPortal:Q64104 SMR:Q64104 DIP:DIP-46432N STRING:Q64104
PhosphoSite:Q64104 PRIDE:Q64104 Ensembl:ENSMUST00000019938
GeneID:21907 KEGG:mmu:21907 InParanoid:Q64104 OMA:ILLEDAW
NextBio:301450 Bgee:Q64104 CleanEx:MM_NR2E1 Genevestigator:Q64104
GermOnline:ENSMUSG00000019803 Uniprot:Q64104
Length = 385
Score = 246 (91.7 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 179 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 238
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 239 ANTLLAVSGMNTDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 296
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 297 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 353
Score = 201 (75.8 bits), Expect = 4.0e-40, Sum P(2) = 4.0e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 76 KKCLEVNMNKDAVQHER 92
>UNIPROTKB|Q91379 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 KO:K08545 EMBL:S72373
IPI:IPI00600540 PIR:S48074 RefSeq:NP_990501.1 UniGene:Gga.3535
ProteinModelPortal:Q91379 PRIDE:Q91379 GeneID:396082
KEGG:gga:396082 CTD:7101 NextBio:20816140 Uniprot:Q91379
Length = 385
Score = 243 (90.6 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 179 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 238
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 239 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 296
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 297 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 353
Score = 201 (75.8 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 76 KKCLEVNMNKDAVQHER 92
>UNIPROTKB|F1MN68 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 GO:GO:0021764
GO:GO:0021872 GO:GO:0090049 OMA:ILLEDAW EMBL:DAAA02025945
IPI:IPI00823513 RefSeq:NP_001179582.1 UniGene:Bt.85086 PRIDE:F1MN68
Ensembl:ENSBTAT00000018594 GeneID:528156 KEGG:bta:528156
NextBio:20874755 Uniprot:F1MN68
Length = 385
Score = 243 (90.6 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 179 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 238
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 239 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 296
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 297 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 353
Score = 201 (75.8 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 76 KKCLEVNMNKDAVQHER 92
>UNIPROTKB|F1PD89 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:AAEX03008592
RefSeq:XP_532253.2 ProteinModelPortal:F1PD89
Ensembl:ENSCAFT00000006050 GeneID:475017 KEGG:cfa:475017
Uniprot:F1PD89
Length = 385
Score = 243 (90.6 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 179 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 238
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 239 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 296
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 297 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 353
Score = 201 (75.8 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 76 KKCLEVNMNKDAVQHER 92
>UNIPROTKB|Q9Y466 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=IEA] [GO:0021819 "layer formation in cerebral
cortex" evidence=IEA] [GO:0021872 "forebrain generation of neurons"
evidence=IEA] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IEA] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0060164 "regulation of timing of neuron
differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0090049 "regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0043066 GO:GO:0007399 GO:GO:0005654
GO:GO:0046872 GO:GO:0060291 GO:GO:0007601 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665
GO:GO:0045766 GO:GO:0001077 GO:GO:0048814 GO:GO:0060041
GO:GO:0035176 GO:GO:0035019 GO:GO:0001662 GO:GO:0006367
GO:GO:0045165 GO:GO:0008347 GO:GO:0045787 GO:GO:2000179
GO:GO:0048712 GO:GO:0021960 GO:GO:0021542 GO:GO:2000178
GO:GO:0002118 GO:GO:0021772 GO:GO:0021819 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
eggNOG:NOG277339 KO:K08545 CTD:7101 EMBL:Y13276 EMBL:AF220532
EMBL:AF411525 EMBL:AL078596 EMBL:BC028031 IPI:IPI00843777
RefSeq:NP_003260.1 UniGene:Hs.157688 ProteinModelPortal:Q9Y466
SMR:Q9Y466 STRING:Q9Y466 PhosphoSite:Q9Y466 DMDM:9910804
PRIDE:Q9Y466 DNASU:7101 Ensembl:ENST00000368986 GeneID:7101
KEGG:hsa:7101 UCSC:uc003psg.3 GeneCards:GC06P108487 HGNC:HGNC:7973
HPA:HPA036954 MIM:603849 neXtProt:NX_Q9Y466 PharmGKB:PA31756
OrthoDB:EOG4ZCT4Q PhylomeDB:Q9Y466 ChEMBL:CHEMBL1961788
GenomeRNAi:7101 NextBio:27781 ArrayExpress:Q9Y466 Bgee:Q9Y466
CleanEx:HS_NR2E1 Genevestigator:Q9Y466 GermOnline:ENSG00000112333
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 Uniprot:Q9Y466
Length = 385
Score = 243 (90.6 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 179 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 238
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 239 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 296
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 297 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 353
Score = 201 (75.8 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 76 KKCLEVNMNKDAVQHER 92
>UNIPROTKB|I3LU21 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:CU469092
RefSeq:XP_003353327.1 ProteinModelPortal:I3LU21
Ensembl:ENSSSCT00000022342 GeneID:100155153 KEGG:ssc:100155153
Uniprot:I3LU21
Length = 385
Score = 243 (90.6 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 179 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 238
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 239 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 296
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 297 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 353
Score = 201 (75.8 bits), Expect = 9.7e-40, Sum P(2) = 9.7e-40
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 75
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 76 KKCLEVNMNKDAVQHER 92
>UNIPROTKB|F1Q176 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:AAEX03008592
Ensembl:ENSCAFT00000035327 Uniprot:F1Q176
Length = 412
Score = 245 (91.3 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 63/211 (29%), Positives = 110/211 (52%)
Query: 149 TLIEM--PVERIL-EAEQRVD-MKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIP 204
TL+ + P + L E VD + Q P + + ++C++ + LF + WAK +P
Sbjct: 177 TLVSLAQPTPKSLSELATNVDPLAQSPKES--LCTVATESVCESAARLLFMSIKWAKSVP 234
Query: 205 HFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA-PGVTVYRSSAHEAGVGGIF 263
F+TL L+DQ++LL W EL + + +I V LLA G+ + + + + I
Sbjct: 235 AFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQK--LNKII 292
Query: 264 DRV--LTELVSKMREMKMDKTELGCLRTIILFN--P-----DVRGLKSQQVVEMLREKVY 314
+ L E+V++ R++++D TE CL+ I+ F P ++R ++ + L+++
Sbjct: 293 SEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQ 352
Query: 315 TSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+L Y + +P RF KLLL LP+LRSI
Sbjct: 353 LTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 383
Score = 201 (75.8 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 38 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 97
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 98 KKCLEVNMNKDAVQHER 114
>UNIPROTKB|F1RT26 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:CU469092 Ensembl:ENSSSCT00000004846
Uniprot:F1RT26
Length = 421
Score = 243 (90.6 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 215 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 274
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 275 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 332
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 333 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 389
Score = 201 (75.8 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 52 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 111
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 112 KKCLEVNMNKDAVQHER 128
>UNIPROTKB|Q6ZMP8 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2, group E, member
1, isoform CRA_b" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 EMBL:CH471051 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:AL078596 UniGene:Hs.157688 HGNC:HGNC:7973
OMA:ILLEDAW HSSP:P20393 EMBL:AK131541 IPI:IPI00000354 SMR:Q6ZMP8
STRING:Q6ZMP8 Ensembl:ENST00000368983 Uniprot:Q6ZMP8
Length = 422
Score = 243 (90.6 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 55/177 (31%), Positives = 96/177 (54%)
Query: 179 EQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVK 238
E ++C++ + LF + WAK +P F+TL L+DQ++LL W EL + + +I V
Sbjct: 216 EVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVD 275
Query: 239 DGILLA-PGVTVYRSSAHEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFN- 294
LLA G+ + + + + I + L E+V++ R++++D TE CL+ I+ F
Sbjct: 276 ANTLLAVSGMNGDNTDSQK--LNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKA 333
Query: 295 -P-----DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
P ++R ++ + L+++ +L Y + +P RF KLLL LP+LRSI
Sbjct: 334 VPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSI 390
Score = 201 (75.8 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN--CIIDXXXXXXXXXXXX 115
C +CGDR+SGKHYGVY+C+GC GFFKR++R++ +Y C+ G C +D
Sbjct: 53 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRL 112
Query: 116 XXXLNMGMKREAVQEER 132
L + M ++AVQ ER
Sbjct: 113 KKCLEVNMNKDAVQHER 129
>UNIPROTKB|E2R3A8 [details] [associations]
symbol:E2R3A8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 ProteinModelPortal:E2R3A8 Ensembl:ENSCAFT00000024577
Uniprot:E2R3A8
Length = 415
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 97/295 (32%), Positives = 151/295 (51%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYG ++CEGCK FFKR+V K+L++ C+ ++C +D
Sbjct: 80 CLVCGDKSSGKHYGQFTCEGCKSFFKRSVGKNLTFTCQANQDCRVDQYRRNQCQFCRLKK 139
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEP----AD 173
+++GMKREAV R + +G ++ + + P
Sbjct: 140 CIDVGMKREAVHRNRMLPAPPPQGQFTLANGEILNSQTNLSGYISLLIHAEPYPLSGSGS 199
Query: 174 QDIV-NEQQAT-NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFS 231
QD+ N+ NIC+ + LF V+WA+ IP F L + DQV LL W +L + +++
Sbjct: 200 QDVQPNDVLILENICEQAARVLFGAVEWARKIPFFPDLEVNDQVALLHLTWCDLFMLNWA 259
Query: 232 HRSISVKD-GILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
S+ + L A + S+ + V ++L + + K + + +D E CL+ I
Sbjct: 260 QCSMPAQVLPFLAATSLHTSPGSSDQVAVFTENVQMLQDQMEKFKALHVDPAEYSCLKAI 319
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
ILF PD GL VE +EK +LE+Y R +S +P RF KLLLRL SLR++
Sbjct: 320 ILFAPDAPGLSDTVNVESWQEKSQCALEQYVRRQYSNQPMRFGKLLLRLTSLRAV 374
>UNIPROTKB|F6Y5T4 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
Ensembl:ENSCAFT00000024577 EMBL:AAEX03026796 OMA:NDQVALL
Uniprot:F6Y5T4
Length = 414
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 97/295 (32%), Positives = 151/295 (51%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYG ++CEGCK FFKR+V K+L++ C+ ++C +D
Sbjct: 79 CLVCGDKSSGKHYGQFTCEGCKSFFKRSVGKNLTFTCQANQDCRVDQYRRNQCQFCRLKK 138
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEP----AD 173
+++GMKREAV R + +G ++ + + P
Sbjct: 139 CIDVGMKREAVHRNRMLPAPPPQGQFTLANGEILNSQTNLSGYISLLIHAEPYPLSGSGS 198
Query: 174 QDIV-NEQQAT-NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFS 231
QD+ N+ NIC+ + LF V+WA+ IP F L + DQV LL W +L + +++
Sbjct: 199 QDVQPNDVLILENICEQAARVLFGAVEWARKIPFFPDLEVNDQVALLHLTWCDLFMLNWA 258
Query: 232 HRSISVKD-GILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
S+ + L A + S+ + V ++L + + K + + +D E CL+ I
Sbjct: 259 QCSMPAQVLPFLAATSLHTSPGSSDQVAVFTENVQMLQDQMEKFKALHVDPAEYSCLKAI 318
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
ILF PD GL VE +EK +LE+Y R +S +P RF KLLLRL SLR++
Sbjct: 319 ILFAPDAPGLSDTVNVESWQEKSQCALEQYVRRQYSNQPMRFGKLLLRLTSLRAV 373
>UNIPROTKB|P49116 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007399 GO:GO:0005654
GO:GO:0030154 EMBL:CH471055 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872 GO:GO:0003700
GO:GO:0007283 GO:GO:0003713 GO:GO:0021549 GO:GO:0046982
GO:GO:0040019 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0051321 GO:GO:0048520 EMBL:AC090954 eggNOG:NOG297520
HOVERGEN:HBG008596 HOGENOM:HOG000013058 EMBL:U10990 EMBL:L27586
EMBL:AB307708 EMBL:AK290590 EMBL:AC090937 IPI:IPI00332451
IPI:IPI00749258 PIR:A57031 PIR:I59309 RefSeq:NP_003289.2
UniGene:Hs.555973 PDB:3P0U PDBsum:3P0U ProteinModelPortal:P49116
SMR:P49116 DIP:DIP-5999N IntAct:P49116 STRING:P49116
PhosphoSite:P49116 DMDM:1351190 PaxDb:P49116 PRIDE:P49116
DNASU:7182 Ensembl:ENST00000323373 Ensembl:ENST00000393102
Ensembl:ENST00000406272 Ensembl:ENST00000425241 GeneID:7182
KEGG:hsa:7182 UCSC:uc003bzj.4 CTD:7182 GeneCards:GC03P014989
HGNC:HGNC:7972 HPA:HPA006313 MIM:601426 neXtProt:NX_P49116
PharmGKB:PA31755 KO:K08544 OMA:KADVQRP OrthoDB:EOG4Z36D8
BindingDB:P49116 ChEMBL:CHEMBL5716 ChiTaRS:NR2C2
EvolutionaryTrace:P49116 GenomeRNAi:7182 NextBio:28158
ArrayExpress:P49116 Bgee:P49116 CleanEx:HS_NR2C2
Genevestigator:P49116 GermOnline:ENSG00000177463 Uniprot:P49116
Length = 596
Score = 236 (88.1 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 176
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ SN ST
Sbjct: 177 CLEMGMKMESVQSERKPFDVQREKPSNCAAST 208
Score = 215 (80.7 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 52/166 (31%), Positives = 87/166 (52%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 386 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 445
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 446 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDH 505
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL S +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 506 PGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 551
>UNIPROTKB|F1SPJ9 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 GO:GO:0021549 GO:GO:0040019 GO:GO:0051321
GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182 KO:K08544
OMA:KADVQRP EMBL:CU856531 EMBL:CU469370 RefSeq:XP_003132435.3
Ensembl:ENSSSCT00000012690 GeneID:100513111 KEGG:ssc:100513111
Uniprot:F1SPJ9
Length = 596
Score = 236 (88.1 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 176
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ SN ST
Sbjct: 177 CLEMGMKMESVQSERKPFDVQREKPSNCAAST 208
Score = 215 (80.7 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
Identities = 52/166 (31%), Positives = 87/166 (52%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 386 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 445
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 446 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDH 505
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL S +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 506 PGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 551
>ZFIN|ZDB-GENE-041114-63 [details] [associations]
symbol:nr2e3 "nuclear receptor subfamily 2, group E,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041114-63 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL929050
IPI:IPI00511770 ProteinModelPortal:F1QGF3
Ensembl:ENSDART00000127099 ArrayExpress:F1QGF3 Bgee:F1QGF3
Uniprot:F1QGF3
Length = 426
Score = 244 (91.0 bits), Expect = 4.6e-39, Sum P(2) = 4.6e-39
Identities = 53/167 (31%), Positives = 92/167 (55%)
Query: 180 QQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKD 239
++ ++ + + + LF V WAK++P F+ LP DQV+LL W+EL + S+ + +
Sbjct: 233 REPESVYETSARLLFMSVKWAKNLPVFSHLPFRDQVILLEEAWSELFLLCAIQWSLPLDN 292
Query: 240 GILLA-PGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVR 298
LL+ P ++ + RVL E+ S+ + +++D TE CL+ I+LF P+ R
Sbjct: 293 CPLLSLPDLSPTGQGKGSPSASDV--RVLQEVFSRFKPLQVDPTEFACLKAIVLFKPETR 350
Query: 299 GLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
GLK + VE L+++ L ++ + + RF +LLL LPSL +
Sbjct: 351 GLKDPEQVENLQDQSQVLLAQHIHTLYPSQVARFGRLLLLLPSLHFV 397
Score = 198 (74.8 bits), Expect = 4.6e-39, Sum P(2) = 4.6e-39
Identities = 36/78 (46%), Positives = 46/78 (58%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXX 115
LC +C D +SGKHYG+Y+C GC GFFKR+VR+ L Y C+ G C +D
Sbjct: 45 LCKVCSDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRL 104
Query: 116 XXXLNMGMKREAVQEERQ 133
L GM ++AVQ ERQ
Sbjct: 105 KKCLQAGMNKDAVQNERQ 122
>UNIPROTKB|E1B9Y6 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007283 GO:GO:0021549 GO:GO:0030522 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182
KO:K08544 OMA:KADVQRP EMBL:DAAA02054598 IPI:IPI00714058
RefSeq:NP_001178990.1 UniGene:Bt.57739 PRIDE:E1B9Y6
Ensembl:ENSBTAT00000018228 GeneID:505531 KEGG:bta:505531
NextBio:20867182 Uniprot:E1B9Y6
Length = 611
Score = 237 (88.5 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 51/120 (42%), Positives = 69/120 (57%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 132 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKK 191
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPADQ 174
L MGMK E+VQ ER+ +E+ SN ST I + L A +++ A Q
Sbjct: 192 CLEMGMKMESVQSERKPFDVQREKPSNCAASTEKIYIRKDLRSPLIATPTFVAEKDGARQ 251
Score = 214 (80.4 bits), Expect = 4.8e-39, Sum P(2) = 4.8e-39
Identities = 52/166 (31%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 401 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 460
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M + +D E L+ I+LF+PD
Sbjct: 461 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMARLDIDGYEYAYLKAIVLFSPDH 520
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL S +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 521 PGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 566
>UNIPROTKB|E2RI85 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051321 "meiotic cell cycle" evidence=IEA]
[GO:0048520 "positive regulation of behavior" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390
OMA:KADVQRP EMBL:AAEX03012056 Ensembl:ENSCAFT00000007359
NextBio:20858740 Uniprot:E2RI85
Length = 629
Score = 236 (88.1 bits), Expect = 5.4e-39, Sum P(2) = 5.4e-39
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 150 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 209
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ SN ST
Sbjct: 210 CLEMGMKMESVQSERKPFDVQREKPSNCAAST 241
Score = 215 (80.7 bits), Expect = 5.4e-39, Sum P(2) = 5.4e-39
Identities = 52/166 (31%), Positives = 87/166 (52%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 419 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 478
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 479 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDH 538
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL S +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 539 PGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 584
>ZFIN|ZDB-GENE-010504-1 [details] [associations]
symbol:nr5a1a "nuclear receptor subfamily 5, group A,
member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030325 "adrenal gland development" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;IDA] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-010504-1 GO:GO:0005634 GO:GO:0030325
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0021854 HSSP:P19793
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:AF198086 IPI:IPI00492563 RefSeq:NP_571869.1
UniGene:Dr.53400 ProteinModelPortal:Q9IAI9 SMR:Q9IAI9 STRING:Q9IAI9
GeneID:83916 KEGG:dre:83916 CTD:83916 InParanoid:Q9IAI9
NextBio:20934198 ArrayExpress:Q9IAI9 Uniprot:Q9IAI9
Length = 454
Score = 251 (93.4 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 61/184 (33%), Positives = 111/184 (60%)
Query: 167 MKQEPADQDIVNEQQATNI-CKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNEL 225
+ QE + + + + + +++ C D+ LF +V+WA+ F L + DQ+ LL W+EL
Sbjct: 237 LHQEQSGRGKLEKSRPSSLLCVMADQTLFSIVEWARSCVFFKELKVGDQMRLLHNCWSEL 296
Query: 226 LIASFSHRSISV-KDG-ILLAPGVTVYRSSAHEAG--VGGIFDRVLTELVSKMREMKMDK 281
L+ R + +DG +LL G V S+ +AG + + +R +L +++ +++D
Sbjct: 297 LLLDHICRQVHHGRDGSLLLITGQEVELSAVLDAGPPLSSMVERG-QDLSRRLQLLQVDS 355
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E+ CL+ +ILFNP+V+ L++ Q VE ++E+V +L EYT ++ + RF++L+LRLP
Sbjct: 356 REMACLKFLILFNPNVKLLENPQFVESVQEQVNGALLEYTLFSYPQCVERFSQLILRLPE 415
Query: 342 LRSI 345
LRS+
Sbjct: 416 LRSL 419
Score = 191 (72.3 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C + ++C ID
Sbjct: 10 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCTQNQDCGIDKTQRKRCPFCR 69
Query: 115 XXXXLNMGMKREAVQEERQR 134
L++GM+ EAV+ +R R
Sbjct: 70 FQKCLSVGMRLEAVRADRMR 89
>MGI|MGI:1352466 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=IMP]
[GO:0051321 "meiotic cell cycle" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U32939 MGI:MGI:1352466 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0021549 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
eggNOG:NOG297520 HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182
KO:K08544 OrthoDB:EOG4Z36D8 ChiTaRS:NR2C2 EMBL:U11688 EMBL:S75970
IPI:IPI00113012 PIR:I54075 PIR:JC4299 RefSeq:NP_035760.1
UniGene:Mm.442385 UniGene:Mm.87062 ProteinModelPortal:P49117
SMR:P49117 STRING:P49117 PhosphoSite:P49117 PRIDE:P49117
Ensembl:ENSMUST00000113460 GeneID:22026 KEGG:mmu:22026
InParanoid:P49117 NextBio:301768 Bgee:P49117 CleanEx:MM_NR2C2
Genevestigator:P49117 GermOnline:ENSMUSG00000005893 Uniprot:P49117
Length = 596
Score = 236 (88.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKK 176
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ SN ST
Sbjct: 177 CLEMGMKMESVQSERKPFDVQREKPSNCAAST 208
Score = 211 (79.3 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 386 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 445
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 446 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDH 505
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 506 PGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 551
>RGD|3201 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=ISO]
[GO:0051321 "meiotic cell cycle" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 eggNOG:NOG297520 HOVERGEN:HBG008596
HOGENOM:HOG000013058 CTD:7182 KO:K08544 OrthoDB:EOG4Z36D8 EMBL:L27513
IPI:IPI00213603 PIR:I80177 RefSeq:NP_059019.1 UniGene:Rn.10485
ProteinModelPortal:P55094 SMR:P55094 STRING:P55094 PhosphoSite:P55094
PRIDE:P55094 GeneID:50659 KEGG:rno:50659 UCSC:RGD:3201
InParanoid:P55094 NextBio:610474 ArrayExpress:P55094
Genevestigator:P55094 GermOnline:ENSRNOG00000010536 Uniprot:P55094
Length = 596
Score = 236 (88.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKK 176
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ SN ST
Sbjct: 177 CLEMGMKMESVQSERKPFDVQREKPSNCAAST 208
Score = 211 (79.3 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 386 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 445
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 446 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGHEYAYLKAIVLFSPDH 505
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 506 PGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 551
>UNIPROTKB|G3V7F5 [details] [associations]
symbol:Nr2c2 "RCG56527, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048520 "positive regulation of behavior"
evidence=IEA] [GO:0051321 "meiotic cell cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:CH473957 GeneTree:ENSGT00700000104390 OMA:KADVQRP
Ensembl:ENSRNOT00000014353 Uniprot:G3V7F5
Length = 596
Score = 236 (88.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINKHHRNRCQFCRLKK 176
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ SN ST
Sbjct: 177 CLEMGMKMESVQSERKPFDVQREKPSNCAAST 208
Score = 211 (79.3 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L + L+RA WNEL + + + +LA
Sbjct: 386 ICESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILA 445
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 446 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDH 505
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL +E +EK L++Y + +SE+ R A++L+RLP+LR
Sbjct: 506 PGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALR 551
>UNIPROTKB|F1P0D1 [details] [associations]
symbol:F1P0D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
GeneTree:ENSGT00700000104390 OMA:KADVQRP EMBL:AADN02014532
EMBL:AADN02014533 IPI:IPI00577280 Ensembl:ENSGALT00000013874
ArrayExpress:F1P0D1 Uniprot:F1P0D1
Length = 600
Score = 233 (87.1 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 45/92 (48%), Positives = 60/92 (65%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK+L+Y+CR ++CII+
Sbjct: 121 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 180
Query: 118 XLNMGMKREAVQEERQR---TKERDSNEVEST 146
L MGMK E+VQ ER+ +E+ +N ST
Sbjct: 181 CLEMGMKMESVQSERKPFDVQREKPTNCAAST 212
Score = 213 (80.0 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 52/166 (31%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L E L+RA WNEL + + + +LA
Sbjct: 390 ICESASRLLFLSMHWARSIPAFQALGQECNTSLVRACWNELFTLGLAQCAQVMSLSTILA 449
Query: 245 PGVTVYRSSAHEAGVGG-----IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S E + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 450 AIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKIDIDGYEYAYLKAIVLFSPDH 509
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL S +E +EK L++Y + + E+ R A++L+RLP+LR
Sbjct: 510 PGLNSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALR 555
>UNIPROTKB|F1NBB9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0001892
"embryonic placenta development" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
OMA:EDRHLGS EMBL:AADN02003482 EMBL:AADN02003483 IPI:IPI00811660
Ensembl:ENSGALT00000016888 Uniprot:F1NBB9
Length = 438
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 97/305 (31%), Positives = 163/305 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 105 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 164
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLI--EMP----------VERILEA 161
L +GM +E V+ +R R +++ ++S S T + ++P V +L A
Sbjct: 165 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSTYLSLQIPPPAKKPLTKIVSHLLVA 224
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P + DI + T +C D++L ++ WAKHIP F+ L L DQ+ LL
Sbjct: 225 EPEKIYAMPDPTMPESDI---KALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLL 281
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+ +D ++ A + + G+ ++ +L +LV + +++K
Sbjct: 282 QSAWMEILILGIVYRSLPYEDKLVYAEDYIMDEEHSRLTGLLELYLAIL-QLVRRYKKLK 340
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
++K E L+ + L N D ++ V+ L++ ++ +L++Y +EEP R KLLL
Sbjct: 341 VEKEEFVTLKALALANSDSMHIEDMDAVQKLQDLLHEALQDYELSQRNEEPRRAGKLLLT 400
Query: 339 LPSLR 343
LP LR
Sbjct: 401 LPLLR 405
>ZFIN|ZDB-GENE-080403-8 [details] [associations]
symbol:nr2c2 "nuclear receptor subfamily 2, group C,
member 2" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-8 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 eggNOG:NOG297520 GeneTree:ENSGT00700000104390
HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182 KO:K08544
OMA:KADVQRP OrthoDB:EOG4Z36D8 EMBL:FP017199 IPI:IPI00511238
RefSeq:NP_001116766.1 UniGene:Dr.160181 SMR:B0UXU0
Ensembl:ENSDART00000011597 Ensembl:ENSDART00000125232 GeneID:569321
KEGG:dre:569321 NextBio:20889621 Uniprot:B0UXU0
Length = 623
Score = 235 (87.8 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 49/131 (37%), Positives = 72/131 (54%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD+ASG+HYG SCEGCKGFFKR+VRK L+Y+CR ++C+I+
Sbjct: 147 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSLTYSCRSNQDCVINKHHRNRCQFCRLRK 206
Query: 118 XLNMGMKREAVQEERQRT---KERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPADQ 174
L MGMK E+VQ ER+ +E+ +N ST I + L A +++ +
Sbjct: 207 CLEMGMKMESVQSERKPIDLPREKPANCAASTEKIYIRKDLRSPLIATPTFISEKDSSRS 266
Query: 175 DIVNEQQATNI 185
+++ NI
Sbjct: 267 KLLDSGMLVNI 277
Score = 209 (78.6 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 52/167 (31%), Positives = 85/167 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F L E L+RA WNEL I + + + +L
Sbjct: 412 ICESASRLLFLSMHWARSIPAFLALGQECNTALVRACWNELFILGLAQCAQIMSLSTILT 471
Query: 245 PGVTVYRSSAHEAG------VGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPD 296
V +SS + + + + + L E + M +++ D E L+ I+LF+PD
Sbjct: 472 AIVNHLQSSIQDVDKLSSERIKLVMEHIWKLQEFCNSMAKLQTDAYEYAYLKAIVLFSPD 531
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL S +E +EK L++Y + + +E R A++LLRLP+LR
Sbjct: 532 HPGLSSCSQIEKFQEKAQMELQDYVQKTYPDETYRLARILLRLPALR 578
>MGI|MGI:1346832 [details] [associations]
symbol:Esrrb "estrogen related receptor, beta" species:10090
"Mus musculus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IDA] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IMP] [GO:0001834 "trophectodermal
cell proliferation" evidence=IMP] [GO:0001892 "embryonic placenta
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:1346832 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000980 GO:GO:0003713 GO:GO:0001892 GO:GO:0019827
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X89594 EMBL:S82458
EMBL:AK052256 EMBL:AC126685 EMBL:AC132189 EMBL:BC132595
EMBL:BC132597 IPI:IPI00874774 IPI:IPI01026653 PIR:S58087
RefSeq:NP_001152972.1 RefSeq:NP_036064.3 UniGene:Mm.235550
ProteinModelPortal:Q61539 DIP:DIP-46110N IntAct:Q61539
STRING:Q61539 PhosphoSite:Q61539 PRIDE:Q61539
Ensembl:ENSMUST00000021680 Ensembl:ENSMUST00000167891 GeneID:26380
KEGG:mmu:26380 InParanoid:Q61539 NextBio:304293 CleanEx:MM_ESRRB
Genevestigator:Q61539 GermOnline:ENSMUSG00000021255 Uniprot:Q61539
Length = 433
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 95/302 (31%), Positives = 156/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y C C I
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYNCPATNECEITKRRRKSCQACR 159
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEMP------------VERILEA 161
L +GM +E V+ +R R +++ ++S + + +P V +L
Sbjct: 160 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLNLPISPPAKKPLTKIVSNLLGV 219
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
EQ P D + + T +C+ D++L L++WAKHIP F +L L DQ+ LL++
Sbjct: 220 EQDKLYAMPPNDIPEGDIKALTTLCELADRELVFLINWAKHIPGFPSLTLGDQMSLLQSA 279
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D + A + + G+ ++ R + +LV + +++K++K
Sbjct: 280 WMEILILGIVYRSLPYDDKLAYAEDYIMDEEHSRLVGLLDLY-RAILQLVRRYKKLKVEK 338
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D +++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 339 EEFMILKALALANSDSMYIENLEAVQKLQDLLHEALQDYELSQRHEEPRRAGKLLLTLPL 398
Query: 342 LR 343
LR
Sbjct: 399 LR 400
>UNIPROTKB|F1SA88 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:CU463901
EMBL:CU929762 ProteinModelPortal:F1SA88 SMR:F1SA88
Ensembl:ENSSSCT00000011830 Uniprot:F1SA88
Length = 396
Score = 290 (107.1 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 73/233 (31%), Positives = 128/233 (54%)
Query: 122 GMKREAVQEERQRTKER-DSNEVESTSGTLIE---MP----VERILEAE-QRVDMKQEPA 172
G++ + V+ RQ+ K R D+ + L++ P V +L AE +++ +P
Sbjct: 135 GVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVAEPEKIYAMPDPT 194
Query: 173 --DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASF 230
D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL++ W E+LI
Sbjct: 195 VPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGV 251
Query: 231 SHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTI 290
+RS+S +D ++ A + + AG+ + + +L +LV K + MK++K E L+ I
Sbjct: 252 VYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMKLEKEEFVTLKAI 310
Query: 291 ILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
L N D ++ + V+ L++ ++ +L++Y H E+P R K+L+ LP LR
Sbjct: 311 ALANSDSMHIEDVEAVQKLQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLR 363
Score = 135 (52.6 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 23/33 (69%), Positives = 26/33 (78%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVR 87
K LC +CGD ASG HYGV SCE CK FFKRT++
Sbjct: 102 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQ 134
>UNIPROTKB|Q6GN21 [details] [associations]
symbol:nr2c1-a "Nuclear receptor subfamily 2 group C member
1-A" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 EMBL:BC073700 EMBL:AF013295
RefSeq:NP_001084198.1 UniGene:Xl.21534 ProteinModelPortal:Q6GN21
SMR:Q6GN21 GeneID:399361 KEGG:xla:399361 CTD:399361
Xenbase:XB-GENE-6254030 HOVERGEN:HBG008596 KO:K08543 Uniprot:Q6GN21
Length = 637
Score = 232 (86.7 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 48/133 (36%), Positives = 74/133 (55%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y CR ++C+I+
Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQ 210
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEAEQR-VDMKQEPA 172
+++GMK+++VQ ER+ ++E+ SN ST I + L A V + P
Sbjct: 211 RCMSLGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAATTTFVTENKTPR 270
Query: 173 DQDIVNEQQATNI 185
+++ NI
Sbjct: 271 TTSLLDSSMLVNI 283
Score = 211 (79.3 bits), Expect = 4.1e-38, Sum P(2) = 4.1e-38
Identities = 54/166 (32%), Positives = 88/166 (53%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F +L E+ + L++A WNEL + S + +LA
Sbjct: 427 ICESASRLLFLSMHWARSIPSFQSLGQENSISLVKACWNELFSLGLAQCSQVMNVETILA 486
Query: 245 PGVT-VYRSSAHEA----GVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V + S H+ V + D + L E + M ++ +D E L+ I LF+PD
Sbjct: 487 AFVNHLQNSMQHDKLSSDKVKLVTDHIFKLQEFCNSMVKLCVDGYEYAYLKAIALFSPDH 546
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +E L+EK Y ++Y + E+ R ++LLLRLP+LR
Sbjct: 547 PGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALR 592
>UNIPROTKB|Q90966 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032526 "response to
retinoic acid" evidence=IDA] [GO:0021575 "hindbrain morphogenesis"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0021575
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 KO:K08527
CTD:5914 EMBL:X73972 EMBL:X78335 IPI:IPI00603905 IPI:IPI00604270
PIR:I50674 RefSeq:NP_989867.1 UniGene:Gga.112
ProteinModelPortal:Q90966 SMR:Q90966 STRING:Q90966 GeneID:395213
KEGG:gga:395213 NextBio:20815302 Uniprot:Q90966
Length = 460
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 96/317 (30%), Positives = 165/317 (52%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++D + E + ++ VE ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKDVPKTECSESYIVTPEVEELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ L+E + +L+ Y R +
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDKLQEPLLEALKIYVRKRRPNK 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>WB|WBGene00003654 [details] [associations]
symbol:nhr-64 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0040010
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0019915 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:AY204172
EMBL:AY204173 EMBL:AY204174 EMBL:FO080867 PIR:T32890
RefSeq:NP_001021042.2 RefSeq:NP_001021043.2 UniGene:Cel.18405
ProteinModelPortal:O44960 SMR:O44960 DIP:DIP-26511N IntAct:O44960
MINT:MINT-1104696 STRING:O44960 PaxDb:O44960 PRIDE:O44960
EnsemblMetazoa:C45E1.1a GeneID:171884 KEGG:cel:CELE_C45E1.1
UCSC:C45E1.1b CTD:171884 WormBase:C45E1.1a WormBase:C45E1.1b
InParanoid:O44960 KO:K07295 OMA:EIEYIAL NextBio:873097
ArrayExpress:O44960 Uniprot:O44960
Length = 369
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 96/296 (32%), Positives = 159/296 (53%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C+ICGDRA+GKHYG SC+GCKGFF+RT+RK SY CR G C +D
Sbjct: 27 CAICGDRATGKHYGAMSCDGCKGFFRRTIRKRHSYVCRFGEKCQVDKAKRNSCRKCRFDV 86
Query: 118 XLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPV-ERILEAEQRV-DMKQEPADQD 175
L GM+R+AVQ ER R + + S G + + P+ + ++ AE ++ +
Sbjct: 87 CLRKGMRRDAVQTERDRIRPANPLSNGSNGGIVPDDPLLDTLIRAEASTRGLRTTVITKT 146
Query: 176 IVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHR 233
+QAT ++ + ++QL +V+WAK + F + QV LLR + L+ + R
Sbjct: 147 AEARKQATTNDVTDSMNQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFR 206
Query: 234 SISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILF 293
SI + D + L +++ S + + +R++ ++ + MR + M++ E L+ I F
Sbjct: 207 SIHLSDAVWLTNETCLHKDSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFF 266
Query: 294 NPDVRGLKSQQV--VEMLREKVYTSLEEYTR-VN-HSEEPGRFAKLLLRLPSLRSI 345
+P +G+ S+ VE +R+++ S E + R V+ + + P RFA LLL LP + +I
Sbjct: 267 DPLAKGITSESYSDVEEMRQRILESFERHVRYVSPYKDMPLRFANLLLLLPPMLAI 322
>UNIPROTKB|F1NWE8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI00681960 ProteinModelPortal:F1NWE8
Ensembl:ENSGALT00000018430 ArrayExpress:F1NWE8 Uniprot:F1NWE8
Length = 368
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 98/318 (30%), Positives = 167/318 (52%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 14 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCV 72
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEA 161
I+ +GM +E+V+ +R + K+++ + EST + ++ + E+
Sbjct: 73 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEPTKQESTENYEMTAELDDLTES 131
Query: 162 EQRVDMKQEPADQDIVNEQQA--------------TNICKATDKQLFQLVDWAKHIPHFT 207
E ++ K P + Q TN AT K + ++V++AK +P FT
Sbjct: 132 E-KLTRKPSPRSASWESTLQTRVQTIGFDWTLGSGTNSVNAT-KCIIKIVEFAKRLPGFT 189
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
+L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 190 SLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF 249
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
T +++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R
Sbjct: 250 T-FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKRRPN 308
Query: 328 EPGRFAKLLLRLPSLRSI 345
+P F K+L+++ LRSI
Sbjct: 309 KPHMFPKILMKITDLRSI 326
>UNIPROTKB|E7EWD9 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC008050
EMBL:AC016543 HGNC:HGNC:3473 ChiTaRS:ESRRB IPI:IPI00965112
ProteinModelPortal:E7EWD9 SMR:E7EWD9 Ensembl:ENST00000512784
ArrayExpress:E7EWD9 Bgee:E7EWD9 Uniprot:E7EWD9
Length = 508
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 95/302 (31%), Positives = 157/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 105 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 164
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEM--------PVERI----LEA 161
L +GM +E V+ +R R +++ ++S S + + P+ +I L A
Sbjct: 165 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVA 224
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P + + T +C D++L ++ WAKHIP F++L L DQ+ LL++
Sbjct: 225 EPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSA 284
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D ++ A + + AG+ ++ R + +LV + +++K++K
Sbjct: 285 WMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELY-RAILQLVRRYKKLKVEK 343
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D ++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 344 EEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPL 403
Query: 342 LR 343
LR
Sbjct: 404 LR 405
>UNIPROTKB|O95718 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0001892
"embryonic placenta development" evidence=NAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0005496 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000980 GO:GO:0003713
GO:GO:0008134 GO:GO:0006367 GO:GO:0019827 Orphanet:90636
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 EMBL:AF094517 EMBL:AY451389 EMBL:AY451390
EMBL:AB307714 EMBL:HQ692852 EMBL:AC008050 EMBL:AC016543
EMBL:BC131517 IPI:IPI00032812 RefSeq:NP_004443.3 UniGene:Hs.435845
PDB:1LO1 PDBsum:1LO1 ProteinModelPortal:O95718 SMR:O95718
STRING:O95718 PhosphoSite:O95718 PaxDb:O95718 PRIDE:O95718
DNASU:2103 Ensembl:ENST00000261532 Ensembl:ENST00000380887
Ensembl:ENST00000505752 Ensembl:ENST00000509242
Ensembl:ENST00000556177 GeneID:2103 KEGG:hsa:2103 CTD:2103
GeneCards:GC14P076837 HGNC:HGNC:3473 MIM:602167 MIM:608565
neXtProt:NX_O95718 PharmGKB:PA27889 KO:K08553 OMA:EDRHLGS
OrthoDB:EOG479F71 BindingDB:O95718 ChEMBL:CHEMBL3751 ChiTaRS:ESRRB
EvolutionaryTrace:O95718 GenomeRNAi:2103 NextBio:8507
ArrayExpress:O95718 Bgee:O95718 CleanEx:HS_ESRRB
Genevestigator:O95718 GermOnline:ENSG00000119715 GO:GO:0001834
Uniprot:O95718
Length = 508
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 95/302 (31%), Positives = 157/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 159
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEM--------PVERI----LEA 161
L +GM +E V+ +R R +++ ++S S + + P+ +I L A
Sbjct: 160 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVA 219
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P + + T +C D++L ++ WAKHIP F++L L DQ+ LL++
Sbjct: 220 EPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSA 279
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D ++ A + + AG+ ++ R + +LV + +++K++K
Sbjct: 280 WMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELY-RAILQLVRRYKKLKVEK 338
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D ++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 339 EEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPL 398
Query: 342 LR 343
LR
Sbjct: 399 LR 400
>UNIPROTKB|F1N0K9 [details] [associations]
symbol:LOC100852315 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:DAAA02029654 EMBL:DAAA02029655
IPI:IPI00690687 ProteinModelPortal:F1N0K9
Ensembl:ENSBTAT00000016290 Uniprot:F1N0K9
Length = 478
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 95/302 (31%), Positives = 156/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 145 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 204
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEM--------PVERI----LEA 161
L +GM +E V+ +R R +++ ++S S + + P+ +I L A
Sbjct: 205 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVA 264
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P + + T +C D++L ++ WAKHIP F+ L L DQ+ LL++
Sbjct: 265 EPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSA 324
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D ++ A + + AG+ ++ R + +LV + +++K++K
Sbjct: 325 WMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELY-RAILQLVRRYKKLKVEK 383
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D ++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 384 EEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPL 443
Query: 342 LR 343
LR
Sbjct: 444 LR 445
>UNIPROTKB|E2QSQ7 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
Ensembl:ENSCAFT00000027147 Uniprot:E2QSQ7
Length = 441
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 95/302 (31%), Positives = 156/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 159
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEM--------PVERI----LEA 161
L +GM +E V+ +R R +++ ++S S + + P+ +I L A
Sbjct: 160 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVA 219
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P + + T +C D++L ++ WAKHIP F+ L L DQ+ LL++
Sbjct: 220 EPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSA 279
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D ++ A + + AG+ ++ R + +LV + +++K++K
Sbjct: 280 WMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELY-RAILQLVRRYKKLKVEK 338
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D ++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 339 EEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPL 398
Query: 342 LR 343
LR
Sbjct: 399 LR 400
>UNIPROTKB|F6V776 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:EDRHLGS Ensembl:ENSCAFT00000027147
EMBL:AAEX03005862 EMBL:AAEX03005860 EMBL:AAEX03005861
Uniprot:F6V776
Length = 438
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 95/302 (31%), Positives = 156/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 105 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 164
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEM--------PVERI----LEA 161
L +GM +E V+ +R R +++ ++S S + + P+ +I L A
Sbjct: 165 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVA 224
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P + + T +C D++L ++ WAKHIP F+ L L DQ+ LL++
Sbjct: 225 EPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSA 284
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D ++ A + + AG+ ++ R + +LV + +++K++K
Sbjct: 285 WMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELY-RAILQLVRRYKKLKVEK 343
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D ++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 344 EEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPL 403
Query: 342 LR 343
LR
Sbjct: 404 LR 405
>UNIPROTKB|F1S2P9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:CT757460 Ensembl:ENSSSCT00000002655
Uniprot:F1S2P9
Length = 504
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 95/302 (31%), Positives = 156/302 (51%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 159
Query: 115 XXXXLNMGMKREAVQEERQRT-KERDSNEVESTSGTLIEM--------PVERI----LEA 161
L +GM +E V+ +R R +++ ++S S + + P+ +I L A
Sbjct: 160 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVA 219
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P + + T +C D++L ++ WAKHIP F+ L L DQ+ LL++
Sbjct: 220 EPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSA 279
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D ++ A + + AG+ ++ R + +LV + +++K++K
Sbjct: 280 WMEILILGIVYRSLPYDDKLVYAEDYIMDEEHSRLAGLLELY-RAILQLVRRYKKLKVEK 338
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D ++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 339 EEFVTLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPL 398
Query: 342 LR 343
LR
Sbjct: 399 LR 400
>RGD|1359557 [details] [associations]
symbol:Esrrb "estrogen-related receptor beta" species:10116
"Rattus norvegicus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA;ISO]
[GO:0001834 "trophectodermal cell proliferation" evidence=IEA;ISO]
[GO:0001892 "embryonic placenta development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1359557
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OMA:EDRHLGS OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X51417
EMBL:AY383731 IPI:IPI00194043 RefSeq:NP_001008516.2
UniGene:Rn.104984 ProteinModelPortal:P11475 SMR:P11475
STRING:P11475 PhosphoSite:P11475 PRIDE:P11475
Ensembl:ENSRNOT00000013867 GeneID:299210 KEGG:rno:299210
UCSC:RGD:1359557 InParanoid:P11475 NextBio:645036
Genevestigator:P11475 Uniprot:P11475
Length = 433
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 97/302 (32%), Positives = 153/302 (50%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 100 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 159
Query: 115 XXXXLNMGMKREAVQEER-----QRTKERDSNEVESTSGTLIEMPVER--------ILEA 161
L +GM +E V+ +R Q+ K R +E I P ++ +L A
Sbjct: 160 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQISPPAKKPLTKIVSYLLVA 219
Query: 162 EQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAG 221
E P D + + T +C D++L L+ WAKHIP F+ L L DQ+ LL++
Sbjct: 220 EPDKLYAMPPDDVPEGDIKALTTLCDLADRELVFLISWAKHIPGFSNLTLGDQMSLLQSA 279
Query: 222 WNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDK 281
W E+LI +RS+ D + A + + G+ ++ R + +LV + +++K++K
Sbjct: 280 WMEILILGIVYRSLPYDDKLAYAEDYIMDEEHSRLVGLLELY-RAILQLVRRYKKLKVEK 338
Query: 282 TELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPS 341
E L+ + L N D +++ + V+ L++ ++ +L++Y EEP R KLLL LP
Sbjct: 339 EEFVMLKALALANSDSMYIENLEAVQKLQDLLHEALQDYELSQRHEEPRRAGKLLLTLPL 398
Query: 342 LR 343
LR
Sbjct: 399 LR 400
>ZFIN|ZDB-GENE-040616-2 [details] [associations]
symbol:esrrb "estrogen-related receptor beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040616-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CABZ01058931 EMBL:CABZ01058932
EMBL:CABZ01058933 EMBL:CABZ01073498 EMBL:CABZ01073499
EMBL:CABZ01073500 EMBL:CABZ01113871 IPI:IPI00504271
ProteinModelPortal:F1R2J7 Ensembl:ENSDART00000007600 Bgee:F1R2J7
Uniprot:F1R2J7
Length = 484
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 100/307 (32%), Positives = 163/307 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 149 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 208
Query: 115 XXXXLNMGMKREAVQEERQR---TKERDSNEVESTS--GTLIEMPVERI--------LEA 161
L +GM R V+ +R R K + + E+T+ G + PV + L A
Sbjct: 209 FMKCLKVGMLRSGVRLDRVRGGRQKYKRRMDAENTAYLGLTLPPPVSAVVTKIVSHLLVA 268
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPH-FTTLPLEDQVLL 217
E +++ +P + DI + T +C D++L ++ WAKHIP F++L L DQ+ L
Sbjct: 269 EPEKIYAMPDPTMPESDI---KALTTLCDLADRELVVIIGWAKHIPAGFSSLSLGDQMSL 325
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+LI S RS+ +D ++ A + + G+ ++ +L +LV K +++
Sbjct: 326 LQSAWMEILILSIVFRSLPYEDELVYAEDYVMDEEHSRLTGLLDLYLSIL-QLVRKYKKL 384
Query: 278 KMDKTELGCLRTIILFNP-DVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLL 336
K++K E L+ I L N D ++ + V+ L++ ++ +L++Y H+E+P R KLL
Sbjct: 385 KVEKEEFVTLKAIALANSTDSMHIEDVESVQKLQDALHEALQDYESCQHAEDPRRAGKLL 444
Query: 337 LRLPSLR 343
+ LP LR
Sbjct: 445 MTLPLLR 451
>UNIPROTKB|Q66J63 [details] [associations]
symbol:nr2c1-b "Nuclear receptor subfamily 2 group C member
1-B" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 HOVERGEN:HBG008596
KO:K08543 EMBL:BC081046 RefSeq:NP_001087654.1 UniGene:Xl.7293
ProteinModelPortal:Q66J63 SMR:Q66J63 GeneID:447478 KEGG:xla:447478
CTD:447478 Xenbase:XB-GENE-865413 Uniprot:Q66J63
Length = 637
Score = 226 (84.6 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 44/108 (40%), Positives = 66/108 (61%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y CR ++C+I+
Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLIYTCRGSKDCVINKHYRNRCQYCRLQ 210
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+++GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 211 RCISLGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 258
Score = 208 (78.3 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 53/166 (31%), Positives = 87/166 (52%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F +L E+ + L++A WNEL + + +LA
Sbjct: 427 ICESASRLLFLSMHWARSIPSFLSLGQENSISLVKACWNELFSLGLAQCCQVMNVETILA 486
Query: 245 PGVT-VYRSSAHEA----GVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++ S H+ V + D + L E + M + +D E L+ I LF+PD
Sbjct: 487 AFVNHLHNSMQHDKLSSDKVKLVMDHIFKLQEFCNSMVKRCVDGYEYAYLKAIALFSPDH 546
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +E L+EK Y ++Y + E+ R ++LLLRLP+LR
Sbjct: 547 PGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALR 592
>MGI|MGI:97856 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=ISO] [GO:0001657 "ureteric
bud development" evidence=IMP] [GO:0001972 "retinoic acid binding"
evidence=ISO] [GO:0003417 "growth plate cartilage development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IGI] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0008584 "male gonad development" evidence=ISO] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0010629
"negative regulation of gene expression" evidence=IGI] [GO:0017148
"negative regulation of translation" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO;IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0030852 "regulation of
granulocyte differentiation" evidence=IMP] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO]
[GO:0031490 "chromatin DNA binding" evidence=ISO] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032526 "response to retinoic
acid" evidence=ISO;IMP] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0032736 "positive regulation of interleukin-13 production"
evidence=ISO] [GO:0032753 "positive regulation of interleukin-4
production" evidence=ISO] [GO:0032754 "positive regulation of
interleukin-5 production" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IGI;IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IMP]
[GO:0044323 "retinoic acid-responsive element binding"
evidence=ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISO] [GO:0045787 "positive
regulation of cell cycle" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0045947
"negative regulation of translational initiation" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=ISO] [GO:0048167 "regulation of synaptic
plasticity" evidence=ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051018 "protein kinase A
binding" evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] [GO:0060010 "Sertoli cell fate
commitment" evidence=IMP] [GO:0060591 "chondroblast
differentiation" evidence=IMP] [GO:0061037 "negative regulation of
cartilage development" evidence=IMP] [GO:0071222 "cellular response
to lipopolysaccharide" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97856
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0032689 GO:GO:0032355 GO:GO:0046872 GO:GO:0045947
GO:GO:0008284 GO:GO:0043025 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944 GO:GO:0006468
GO:GO:0007283 GO:GO:0071222 GO:GO:0000122 GO:GO:0044212
GO:GO:0000790 GO:GO:0003713 GO:GO:0032526 GO:GO:0032720
GO:GO:0007281 GO:GO:0035264 GO:GO:0030853 GO:GO:0010628
GO:GO:0051099 GO:GO:0031490 GO:GO:0001657 GO:GO:0030520
GO:GO:0045787 GO:GO:0071391 GO:GO:0043277 GO:GO:0032753
GO:GO:0045630 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0001972
GO:GO:0060591 GO:GO:0003708 GO:GO:0045596 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7 CTD:5914 GO:GO:0060010
EMBL:X56572 EMBL:X56565 EMBL:S56656 EMBL:X57528 EMBL:M60909
EMBL:BC010216 IPI:IPI00114447 IPI:IPI00223075 PIR:S05050
RefSeq:NP_001169999.1 RefSeq:NP_001170773.1 RefSeq:NP_001170774.1
RefSeq:NP_033050.2 UniGene:Mm.439744 ProteinModelPortal:P11416
SMR:P11416 DIP:DIP-31480N IntAct:P11416 MINT:MINT-5210296
STRING:P11416 PhosphoSite:P11416 PRIDE:P11416
Ensembl:ENSMUST00000068133 Ensembl:ENSMUST00000107473
Ensembl:ENSMUST00000107474 Ensembl:ENSMUST00000107475
Ensembl:ENSMUST00000164748 GeneID:19401 KEGG:mmu:19401
UCSC:uc007lhz.2 InParanoid:P11416 BindingDB:P11416
ChEMBL:CHEMBL2792 NextBio:296513 Bgee:P11416 CleanEx:MM_RARA
Genevestigator:P11416 GermOnline:ENSMUSG00000037992 GO:GO:0030852
Uniprot:P11416
Length = 462
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 95/317 (29%), Positives = 165/317 (52%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ ++GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFDVGMSKESVRNDRNK-KKKEAPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>FB|FBgn0261239 [details] [associations]
symbol:Hr39 "Hormone receptor-like in 39" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS;IDA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0003712 "transcription cofactor activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0016321 "female meiosis
chromosome segregation" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0035072 "ecdysone-mediated induction of salivary gland cell
autophagic cell death" evidence=IMP] [GO:0035211 "spermathecum
morphogenesis" evidence=IMP] [GO:0060968 "regulation of gene
silencing" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014134 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0000978 GO:GO:0006919 GO:GO:0016321
GO:GO:0035072 GO:GO:0060968 EMBL:L06423 EMBL:L07551 EMBL:L07549
EMBL:L07550 EMBL:AY069676 PIR:S33708 PIR:S33709 RefSeq:NP_476932.1
RefSeq:NP_476933.1 RefSeq:NP_599123.1 RefSeq:NP_724322.1
UniGene:Dm.4837 ProteinModelPortal:Q05192 SMR:Q05192 IntAct:Q05192
MINT:MINT-807520 STRING:Q05192 EnsemblMetazoa:FBtr0081479
EnsemblMetazoa:FBtr0081480 EnsemblMetazoa:FBtr0081481 GeneID:35398
KEGG:dme:Dmel_CG8676 CTD:35398 FlyBase:FBgn0261239 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InParanoid:Q05192 KO:K08705
OMA:YTLAHYP OrthoDB:EOG4P8D09 PhylomeDB:Q05192 GenomeRNAi:35398
NextBio:793317 Bgee:Q05192 GermOnline:CG8676 GO:GO:0035211
Uniprot:Q05192
Length = 808
Score = 246 (91.7 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 60/206 (29%), Positives = 103/206 (50%)
Query: 140 SNEVESTSGTL--IEMPVERILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLV 197
S+ S+SGT + L A + E A+ D++ ++C D +L+++V
Sbjct: 578 SSSSSSSSGTSSGAHAQLTNPLLASAGLSSNGENANPDLI-----AHLCNVADHRLYKIV 632
Query: 198 DWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEA 257
W K +P F + ++DQ+ LL W ELL+ S RSI I ++ G + S A
Sbjct: 633 KWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLSQAKSN 692
Query: 258 GVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSL 317
G+ +R+L L +R +++D+ E ++ I+L D L+ V +EK SL
Sbjct: 693 GLQTCIERMLN-LTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQSL 751
Query: 318 EEYTRVNHSEEPGRFAKLLLRLPSLR 343
+ YT ++ + P +F +LLLR+P L+
Sbjct: 752 QAYTLAHYPDTPSKFGELLLRIPDLQ 777
Score = 189 (71.6 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 35/77 (45%), Positives = 44/77 (57%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGD+ SG HYG++SCE CKGFFKRTV+ +Y C G C +
Sbjct: 376 CPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEK 435
Query: 118 XLNMGMKREAVQEERQR 134
L GMK EA++E+R R
Sbjct: 436 CLQKGMKLEAIREDRTR 452
>UNIPROTKB|Q5FBR4 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448
HOGENOM:HOG000010312 KO:K08527 EMBL:AB179779 RefSeq:NP_001012663.1
UniGene:Cfa.45823 ProteinModelPortal:Q5FBR4 SMR:Q5FBR4
STRING:Q5FBR4 GeneID:480526 KEGG:cfa:480526 CTD:5914
NextBio:20855534 Uniprot:Q5FBR4
Length = 462
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 95/317 (29%), Positives = 165/317 (52%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEAPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H+AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSEGLTLNRTQMHKAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>UNIPROTKB|D4A6Q3 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 IPI:IPI00949177
Ensembl:ENSRNOT00000065435 ArrayExpress:D4A6Q3 Uniprot:D4A6Q3
Length = 406
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 95/317 (29%), Positives = 164/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 17 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 76
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 77 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKETPKPECSESYTLTPEVGELIEKV 135
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 136 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 195
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 196 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 255
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 256 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALKVYVRKRRPSR 314
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 315 PHMFPKMLMKITDLRSI 331
>UNIPROTKB|G3V956 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH473948 GO:GO:0003708
OMA:RTENVCI UniGene:Rn.91057 Ensembl:ENSRNOT00000036872
Uniprot:G3V956
Length = 462
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 95/317 (29%), Positives = 164/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKETPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>UNIPROTKB|Q499N1 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001972 "retinoic acid binding" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0032689
"negative regulation of interferon-gamma production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032736 "positive regulation of
interleukin-13 production" evidence=IEA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IEA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043277 "apoptotic cell clearance" evidence=IEA] [GO:0043422
"protein kinase B binding" evidence=IEA] [GO:0043551 "regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045947
"negative regulation of translational initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051018 "protein kinase A binding" evidence=IEA] [GO:0051099
"positive regulation of binding" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IMP] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071391
"cellular response to estrogen stimulus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0014068 GO:GO:0051897
EMBL:CH473948 HOVERGEN:HBG005606 GO:GO:0035014 GO:GO:0003708
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 CTD:5914 UniGene:Rn.91057 EMBL:BC099830 IPI:IPI00212283
RefSeq:NP_113716.2 SMR:Q499N1 STRING:Q499N1
Ensembl:ENSRNOT00000008659 GeneID:24705 KEGG:rno:24705
ChEMBL:CHEMBL2269 NextBio:604175 Genevestigator:Q499N1
Uniprot:Q499N1
Length = 459
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 95/317 (29%), Positives = 164/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 70 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 129
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 130 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKETPKPECSESYTLTPEVGELIEKV 188
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 189 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 248
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 249 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 308
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 309 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDKVDMLQEPLLEALKVYVRKRRPSR 367
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 368 PHMFPKMLMKITDLRSI 384
>UNIPROTKB|E2R2V0 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0061037 "negative regulation
of cartilage development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 OMA:RTENVCI GO:GO:0060010
EMBL:AAEX03006463 EMBL:AAEX03006464 EMBL:AAEX03006465
Ensembl:ENSCAFT00000035664 Uniprot:E2R2V0
Length = 486
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 95/317 (29%), Positives = 164/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 97 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 156
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 157 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEAPKPECSESYTLTPEVGELIEKV 215
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 216 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 275
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 276 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 335
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 336 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 394
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 395 PHMFPKMLMKITDLRSI 411
>UNIPROTKB|F1PN49 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AAEX03006463 EMBL:AAEX03006464
EMBL:AAEX03006465 ProteinModelPortal:F1PN49
Ensembl:ENSCAFT00000011311 Uniprot:F1PN49
Length = 462
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 95/317 (29%), Positives = 164/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEAPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>UNIPROTKB|F1RXC9 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI GO:GO:0060010
EMBL:CU928542 RefSeq:XP_003131522.1 RefSeq:XP_003358102.1
UniGene:Ssc.15829 Ensembl:ENSSSCT00000019026 GeneID:396709
KEGG:ssc:396709 ArrayExpress:F1RXC9 Uniprot:F1RXC9
Length = 462
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 95/317 (29%), Positives = 164/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K++++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEAPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>UNIPROTKB|Q28CK1 [details] [associations]
symbol:nr2c1 "Nuclear receptor subfamily 2 group C member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0030522 eggNOG:NOG297520 HOVERGEN:HBG008596 KO:K08543
CTD:7181 HOGENOM:HOG000013058 OrthoDB:EOG476JZT EMBL:CR926338
EMBL:BC123034 RefSeq:NP_001016207.1 UniGene:Str.15706 HSSP:P33242
ProteinModelPortal:Q28CK1 SMR:Q28CK1 STRING:Q28CK1 GeneID:548961
KEGG:xtr:548961 Xenbase:XB-GENE-484727 Bgee:Q28CK1 Uniprot:Q28CK1
Length = 636
Score = 223 (83.6 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y CR ++C+I+
Sbjct: 151 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYTCRGSKDCVINKHYRNRCQYCRLQ 210
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ +GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 211 RCIALGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 258
Score = 214 (80.4 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 53/166 (31%), Positives = 88/166 (53%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ IP F +L E+ + L++A WNEL + + +LA
Sbjct: 426 ICESASRLLFLSMHWARSIPSFQSLGQENSISLVKACWNELFSLGLAQCCQVMNVETILA 485
Query: 245 PGVT-VYRSSAHEA----GVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++ S H+ V + D + L E + M ++ +D E L+ I LF+PD
Sbjct: 486 AFVNHLHNSMQHDKLSADKVKLVMDHIFKLQEFCNSMVKLSVDGYEYAYLKAIALFSPDH 545
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +E L+EK Y ++Y + E+ R ++LLLRLP+LR
Sbjct: 546 PGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALR 591
>UNIPROTKB|F1MWQ3 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI CTD:5914
GO:GO:0060010 EMBL:DAAA02049130 EMBL:DAAA02049137 EMBL:DAAA02049131
EMBL:DAAA02049132 EMBL:DAAA02049133 EMBL:DAAA02049134
EMBL:DAAA02049135 EMBL:DAAA02049136 IPI:IPI00709635
RefSeq:NP_001014942.2 UniGene:Bt.8306 Ensembl:ENSBTAT00000016586
GeneID:534280 KEGG:bta:534280 NextBio:20876336 Uniprot:F1MWQ3
Length = 462
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 95/317 (29%), Positives = 163/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K+++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>UNIPROTKB|A8MUP8 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 EMBL:CH471152 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 HOGENOM:HOG000010312 EMBL:AC080112
UniGene:Hs.654583 HGNC:HGNC:9864 ChiTaRS:RARA IPI:IPI00014923
SMR:A8MUP8 STRING:A8MUP8 Ensembl:ENST00000394086 Uniprot:A8MUP8
Length = 478
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 95/317 (29%), Positives = 163/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 89 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 148
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K+++ + E + + V ++E
Sbjct: 149 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYTLTPEVGELIEKV 207
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 208 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 267
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 268 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 327
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 328 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 386
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 387 PHMFPKMLMKITDLRSI 403
>UNIPROTKB|P10276 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0007281 "germ cell development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IEA] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0055012 "ventricular cardiac
muscle cell differentiation" evidence=IEA] [GO:0060010 "Sertoli
cell fate commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051099 "positive regulation of binding" evidence=IMP]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045787 "positive regulation of
cell cycle" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IDA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0071300 "cellular
response to retinoic acid" evidence=IDA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0043277 "apoptotic cell clearance"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0051018
"protein kinase A binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0001972 "retinoic acid binding" evidence=IDA]
[GO:0003708 "retinoic acid receptor activity" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0030520
"intracellular estrogen receptor signaling pathway" evidence=IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IDA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IDA] [GO:0032736 "positive regulation
of interleukin-13 production" evidence=IDA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IDA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IDA]
[GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IDA] [GO:0009986 "cell surface"
evidence=IC] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0005654 GO:GO:0009986 GO:GO:0032689
GO:GO:0032355 GO:GO:0046872 GO:GO:0045947 GO:GO:0008284
GO:GO:0043025 GO:GO:0030425 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005102 GO:GO:0006468
GO:GO:0007283 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0071222
GO:GO:0000122 GO:GO:0000790 GO:GO:0003713 GO:GO:0032720
GO:GO:0007281 GO:GO:0046982 GO:GO:0035264 GO:GO:0030853
GO:GO:0051018 Pathway_Interaction_DB:retinoic_acid_pathway
DrugBank:DB00459 GO:GO:0006367 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0001972 GO:GO:0060591 GO:GO:0003708
GO:GO:0032736 GO:GO:0032754 GO:GO:0061037 GO:GO:0055012
GO:GO:0044323 PDB:3KMR PDB:4DQM PDBsum:3KMR PDBsum:4DQM PDB:3A9E
PDBsum:3A9E PDB:3KMZ PDBsum:3KMZ EMBL:U41742 EMBL:U41743
Orphanet:520 EMBL:AB067754 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 HOGENOM:HOG000010312 KO:K08527 OMA:RTENVCI
CTD:5914 EMBL:X06614 EMBL:X06538 EMBL:AF088895 EMBL:AF088889
EMBL:AF088890 EMBL:AF088891 EMBL:AF088892 EMBL:AF088893
EMBL:AF088894 EMBL:FJ487576 EMBL:AC080112 EMBL:BC008727
EMBL:BC071733 EMBL:X56058 EMBL:X58685 EMBL:AF283809 IPI:IPI00020071
IPI:IPI00218375 IPI:IPI00922641 PIR:A29491 RefSeq:NP_000955.1
RefSeq:NP_001019980.1 RefSeq:NP_001138773.1 RefSeq:NP_001138774.1
UniGene:Hs.654583 PDB:1DKF PDB:1DSZ PDBsum:1DKF PDBsum:1DSZ
ProteinModelPortal:P10276 SMR:P10276 DIP:DIP-34N IntAct:P10276
MINT:MINT-123081 STRING:P10276 PhosphoSite:P10276 DMDM:133483
PaxDb:P10276 PRIDE:P10276 DNASU:5914 Ensembl:ENST00000254066
Ensembl:ENST00000394081 Ensembl:ENST00000394089
Ensembl:ENST00000425707 GeneID:5914 KEGG:hsa:5914 UCSC:uc002huk.2
GeneCards:GC17P038465 HGNC:HGNC:9864 MIM:180240 MIM:612376
neXtProt:NX_P10276 PharmGKB:PA34225 PhylomeDB:P10276
BindingDB:P10276 ChEMBL:CHEMBL2055 ChiTaRS:RARA DrugBank:DB00210
DrugBank:DB00982 DrugBank:DB04942 DrugBank:DB00799
EvolutionaryTrace:P10276 GenomeRNAi:5914 NextBio:23018
ArrayExpress:P10276 Bgee:P10276 CleanEx:HS_RARA
Genevestigator:P10276 GermOnline:ENSG00000131759 GO:GO:0060010
Uniprot:P10276
Length = 462
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 95/317 (29%), Positives = 163/317 (51%)
Query: 44 PYPPNHP-LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P L C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII
Sbjct: 73 PSPPSPPPLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCII 132
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ +GM +E+V+ +R + K+++ + E + + V ++E
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEVPKPECSESYTLTPEVGELIEKV 191
Query: 163 QRVDMKQEPA----DQDIVN---EQQAT-------NICKATDKQLFQLVDWAKHIPHFTT 208
++ + PA + N EQ+ + + + K + + V++AK +P FTT
Sbjct: 192 RKAHQETFPALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTT 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ML+E + +L+ Y R
Sbjct: 312 -FANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSR 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKMLMKITDLRSI 387
>UNIPROTKB|P51126 [details] [associations]
symbol:rara "Retinoic acid receptor alpha" species:8355
"Xenopus laevis" [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IMP] [GO:0050769 "positive regulation
of neurogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006351
GO:GO:0050769 GO:GO:0048384 GO:GO:0021955 HOVERGEN:HBG005606
GO:GO:0003708 EMBL:L11445 PIR:A41977 ProteinModelPortal:P51126
SMR:P51126 Xenbase:XB-GENE-865415 Uniprot:P51126
Length = 458
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 91/316 (28%), Positives = 163/316 (51%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP PL C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 76 PTPP--PLPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIIN 133
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
+GM +E+V+ +R + K+++S + E+ ++ + ++E Q
Sbjct: 134 KVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKESPKPEAIESYILSPETQDLIEKVQ 192
Query: 164 RVDMKQEPA-------DQDIVNEQQAT-------NICKATDKQLFQLVDWAKHIPHFTTL 209
+ + PA +EQ+ + + + K + + V++AK +P FTTL
Sbjct: 193 KAHQETFPALCQLGKYTTSFSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTL 252
Query: 210 PLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTE 269
+ DQ+ LL++ ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 253 TIADQITLLKSACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA- 311
Query: 270 LVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEP 329
++ ++MD E G L I L D + L+ V+ L+E + +L+ Y R ++P
Sbjct: 312 FANQPVPLEMDDAETGLLSAICLICGDRQDLEQPDKVDKLQEPLLEALKIYVRTRRPQKP 371
Query: 330 GRFAKLLLRLPSLRSI 345
F K+L+++ LR++
Sbjct: 372 HMFPKMLMKITDLRTV 387
>ZFIN|ZDB-GENE-980526-284 [details] [associations]
symbol:raraa "retinoic acid receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;IDA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA;IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0021575 "hindbrain
morphogenesis" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-284 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526
GO:GO:0021575 HOVERGEN:HBG005606 GO:GO:0003708 EMBL:S74155
EMBL:L03398 EMBL:BC092692 IPI:IPI00505878 PIR:I51256
RefSeq:NP_571481.2 UniGene:Dr.193 HSSP:P10276
ProteinModelPortal:Q90271 SMR:Q90271 STRING:Q90271
Ensembl:ENSDART00000079336 GeneID:30680 KEGG:dre:30680 CTD:30680
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
InParanoid:Q90271 KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7
NextBio:20807033 ArrayExpress:Q90271 Bgee:Q90271 Uniprot:Q90271
Length = 444
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 96/316 (30%), Positives = 165/316 (52%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 63 PSPPPPPRIYKP--CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKNCIIN 120
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG-TL---IEMPVERIL 159
L +GM +E+V+ +R + K+++ + E T TL E ++R+
Sbjct: 121 KVTRNRCQYCRLQKCLEVGMSKESVRNDRNK-KKKEEKKPECTENYTLSPDTEQMIDRVR 179
Query: 160 EAEQRV--DMKQ--EPADQDIVNEQQATNI------CKATDKQLFQLVDWAKHIPHFTTL 209
+A Q + Q + + + A ++ + + K + + V++AK +P FTTL
Sbjct: 180 KAHQETFPSLCQLGKYTTSNSSERRVALDVDLWDKFSELSTKCIIKTVEFAKQLPGFTTL 239
Query: 210 PLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTE 269
+ DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 240 TIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA- 298
Query: 270 LVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEP 329
+++ ++MD E G L I L D + L+ V++L+E + +L+ Y R +P
Sbjct: 299 FANQLLPLEMDDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALKIYVRNRRPHKP 358
Query: 330 GRFAKLLLRLPSLRSI 345
F K+L+++ LRSI
Sbjct: 359 HMFPKMLMKITDLRSI 374
>UNIPROTKB|F1SQP7 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0048386
GeneTree:ENSGT00700000104390 KO:K08543 OMA:QNSNEMS EMBL:FP236518
RefSeq:XP_003126756.1 Ensembl:ENSSSCT00000000986 GeneID:100516014
KEGG:ssc:100516014 Uniprot:F1SQP7
Length = 605
Score = 226 (84.6 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 46/108 (42%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGDRASG+HYG +CEGCKGFFKR++RK+L Y+CR ++CII+
Sbjct: 113 LCVVCGDRASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQ 172
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 173 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 220
Score = 198 (74.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 395 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 454
Query: 245 PGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE-----MKM--DKTELGCLRTIILFNPDV 297
V SS + + +VL E + K++E +K+ D E L+ I+LF+PD
Sbjct: 455 TFVNCLHSSLQQDKMSTERRKVLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDH 514
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ + +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 515 PGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALR 560
>UNIPROTKB|F1N9Q8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 OMA:QEVFVCI EMBL:AADN02001127
EMBL:AADN02001120 EMBL:AADN02001121 EMBL:AADN02001122
EMBL:AADN02001123 EMBL:AADN02001124 EMBL:AADN02001125
EMBL:AADN02001126 IPI:IPI00821263 ProteinModelPortal:F1N9Q8
Ensembl:ENSGALT00000029066 ArrayExpress:F1N9Q8 Uniprot:F1N9Q8
Length = 415
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 97/318 (30%), Positives = 166/318 (52%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 67 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCV 125
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG--TLIEMP--VER 157
I+ +GM +E+V+ +R + K+++ + EST E+ E+
Sbjct: 126 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEPTKQESTENYEMTAELDDLTEK 184
Query: 158 ILEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFT 207
I +A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 185 IRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFT 244
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
+L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 245 SLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF 304
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
T +++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R
Sbjct: 305 T-FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKRRPN 363
Query: 328 EPGRFAKLLLRLPSLRSI 345
+P F K+L+++ LRSI
Sbjct: 364 KPHMFPKILMKITDLRSI 381
>UNIPROTKB|F1NQH5 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0032331 GO:GO:0003708 GO:GO:0061037
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI01017311 Ensembl:ENSGALT00000018429
Ensembl:ENSGALT00000037746 Uniprot:F1NQH5
Length = 359
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 97/318 (30%), Positives = 166/318 (52%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 13 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCV 71
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG--TLIEMP--VER 157
I+ +GM +E+V+ +R + K+++ + EST E+ E+
Sbjct: 72 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEPTKQESTENYEMTAELDDLTEK 130
Query: 158 ILEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFT 207
I +A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 131 IRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFT 190
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
+L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 191 SLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF 250
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
T +++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R
Sbjct: 251 T-FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKRRPN 309
Query: 328 EPGRFAKLLLRLPSLRSI 345
+P F K+L+++ LRSI
Sbjct: 310 KPHMFPKILMKITDLRSI 327
>UNIPROTKB|P22448 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IDA] [GO:0071729 "beak
morphogenesis" evidence=IDA] [GO:0032526 "response to retinoic
acid" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0032526 GO:GO:0035108
GO:GO:0032331 GO:GO:0071729 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 eggNOG:NOG297448 GeneTree:ENSGT00680000099662
HOGENOM:HOG000010312 EMBL:X56674 EMBL:X57341 EMBL:X57340
EMBL:X57339 EMBL:S75943 EMBL:X59473 EMBL:S63196 IPI:IPI00580878
IPI:IPI00589689 PIR:A43786 PIR:I51272 PIR:S13512 RefSeq:NP_990657.1
UniGene:Gga.2668 UniGene:Gga.51498 ProteinModelPortal:P22448
SMR:P22448 STRING:P22448 Ensembl:ENSGALT00000037748 GeneID:396266
KEGG:gga:396266 CTD:5915 InParanoid:P22448 KO:K08528
NextBio:20816318 ArrayExpress:P22448 Uniprot:P22448
Length = 455
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 97/318 (30%), Positives = 166/318 (52%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 73 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCV 131
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSG--TLIEMP--VER 157
I+ +GM +E+V+ +R + K+++ + EST E+ E+
Sbjct: 132 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNK-KKKEPTKQESTENYEMTAELDDLTEK 190
Query: 158 ILEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFT 207
I +A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 191 IRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFT 250
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
+L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 251 SLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF 310
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSE 327
T +++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R
Sbjct: 311 T-FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKRRPN 369
Query: 328 EPGRFAKLLLRLPSLRSI 345
+P F K+L+++ LRSI
Sbjct: 370 KPHMFPKILMKITDLRSI 387
>ZFIN|ZDB-GENE-980526-72 [details] [associations]
symbol:rarab "retinoic acid receptor, alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003708
"retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-72 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX537121 EMBL:CR392003
IPI:IPI00993231 Ensembl:ENSDART00000126022 Uniprot:E7EZ95
Length = 460
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 91/317 (28%), Positives = 164/317 (51%)
Query: 44 PYPPNHPLCGSKHL-CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCII 102
P PP+ P + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C ++CII
Sbjct: 70 PSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKSCII 129
Query: 103 DXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAE 162
+ L +GM +E+V+ +R + K+ D + E ++ E+++E
Sbjct: 130 NKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKRKKDDKKQ-ECLENYVLSPDTEKMIEQV 188
Query: 163 QRVDMKQEPA--------DQDIVNEQQATNI------CKATDKQLFQLVDWAKHIPHFTT 208
++ + P+ + + + A ++ + + K + + V++AK +P FTT
Sbjct: 189 RKAHQETFPSLCQLGKYTTNNSADHRVALDVDLWDKFSELSTKCIIKTVEFAKQLPGFTT 248
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V
Sbjct: 249 LTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 308
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD E G L I L D + L+ V+ L+E + +L+ Y R +
Sbjct: 309 -FANQLLPLEMDDAETGLLSAICLLCGDRQDLEQSDKVDELQEPLLEALKIYVRNRRPHK 367
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 368 PHMFPKMLMKITDLRSI 384
>UNIPROTKB|Q26622 [details] [associations]
symbol:SHR2 "Orphan steroid hormone receptor 2"
species:7668 "Strongylocentrotus purpuratus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0048471 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045177
GO:GO:0030522 GO:GO:0005652 eggNOG:NOG297520 KO:K14031 EMBL:U38281
EMBL:U38528 EMBL:U38529 RefSeq:NP_001116968.1 UniGene:Spu.209
ProteinModelPortal:Q26622 SMR:Q26622 GeneID:373398 KEGG:spu:373398
CTD:373398 Uniprot:Q26622
Length = 583
Score = 226 (84.6 bits), Expect = 6.1e-36, Sum P(2) = 6.1e-36
Identities = 43/93 (46%), Positives = 55/93 (59%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC++CGD+ASG+HYG SCEGCKGFFKR++RK L Y CR ++C I
Sbjct: 86 LCAVCGDKASGRHYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQ 145
Query: 117 XXLNMGMKREAVQEERQRTKERDSNEVESTSGT 149
L+MGMK ++VQ ER K RD + T
Sbjct: 146 KCLDMGMKSDSVQCERSPLKTRDKTPGNCAAST 178
Score = 195 (73.7 bits), Expect = 6.1e-36, Sum P(2) = 6.1e-36
Identities = 46/166 (27%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC++ + LF + WA+ +P F L + +++ W+EL + + ++ +L
Sbjct: 366 ICESASRLLFLSMHWARSLPAFQVLSADTHTSMVQKCWSELFTLGLAQCAQAMALSTILT 425
Query: 245 PGVTVYRSSAHEAG-----VGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V ++S + V + + + L E V+ ++ +D+TE L+TI+LF+PD
Sbjct: 426 AIVNHLQTSLQQDKLSADRVKAVMEHIWKLQEFVTTTSKLDVDQTEFAYLKTIVLFSPDH 485
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL + + +E +E + L +Y + + RF+KLLLRLP+LR
Sbjct: 486 PGLSNVRQIEKFQEMAISELHDYEAQTYPSKLNRFSKLLLRLPTLR 531
>UNIPROTKB|E2R2A6 [details] [associations]
symbol:RARB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0048048 "embryonic
eye morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0048566 GO:GO:0035264
GO:GO:0035116 GO:GO:0048048 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 GO:GO:0003708 GO:GO:0061037
GO:GO:0055012 GeneTree:ENSGT00680000099662 CTD:5915 KO:K08528
OMA:QEVFVCI EMBL:AAEX03013556 RefSeq:XP_850755.1
Ensembl:ENSCAFT00000009235 GeneID:477045 KEGG:cfa:477045
NextBio:20852594 Uniprot:E2R2A6
Length = 448
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 97/317 (30%), Positives = 164/317 (51%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 66 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCV 124
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNE--VESTSGTL-IEMPVERI 158
I+ +GM +E+V+ +R + K+ S + ES T ++ E+I
Sbjct: 125 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKI 184
Query: 159 LEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFTT 208
+A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 185 RKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTG 244
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V T
Sbjct: 245 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFT 304
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R +
Sbjct: 305 -FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSK 363
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 364 PHMFPKILMKITDLRSI 380
>UNIPROTKB|D6RBI3 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 HGNC:HGNC:9865 EMBL:AC093416
EMBL:AC092422 EMBL:AC098477 EMBL:AC133141 EMBL:AC133797
IPI:IPI00967715 ProteinModelPortal:D6RBI3 SMR:D6RBI3
Ensembl:ENST00000383772 ArrayExpress:D6RBI3 Bgee:D6RBI3
Uniprot:D6RBI3
Length = 402
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 97/317 (30%), Positives = 164/317 (51%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 73 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCV 131
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNE--VESTSGTL-IEMPVERI 158
I+ +GM +E+V+ +R + K+ S + ES T ++ E+I
Sbjct: 132 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKETSKQECTESYEMTAELDDLTEKI 191
Query: 159 LEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFTT 208
+A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 192 RKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTG 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V T
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFT 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R +
Sbjct: 312 -FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSK 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKILMKITDLRSI 387
>UNIPROTKB|P10826 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0021756 "striatum development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048566
"embryonic digestive tract development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0008285 GO:GO:0005654 GO:GO:0022008 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0048048
DrugBank:DB00459 GO:GO:0006367 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 GO:GO:0055012 PDB:4DM6 PDB:4DM8 PDBsum:4DM6
PDBsum:4DM8 DrugBank:DB00523 DrugBank:DB00926 eggNOG:NOG297448
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB04942 DrugBank:DB00799 CTD:5915 KO:K08528 EMBL:X07282
EMBL:Y00291 EMBL:AF157483 EMBL:BC060794 EMBL:X56849 EMBL:X77664
EMBL:X04014 EMBL:M57445 IPI:IPI00022989 IPI:IPI00219014
IPI:IPI00745428 PIR:S02827 PIR:S49021 RefSeq:NP_000956.2
RefSeq:NP_057236.1 UniGene:Hs.654490 UniGene:Hs.733004 PDB:1HRA
PDB:1XAP PDBsum:1HRA PDBsum:1XAP ProteinModelPortal:P10826
SMR:P10826 IntAct:P10826 MINT:MINT-1180428 STRING:P10826
DMDM:17380507 PRIDE:P10826 DNASU:5915 Ensembl:ENST00000330688
Ensembl:ENST00000404969 Ensembl:ENST00000437042
Ensembl:ENST00000458646 GeneID:5915 KEGG:hsa:5915 UCSC:uc003cdi.2
GeneCards:GC03P025194 HGNC:HGNC:9865 HPA:CAB002617 HPA:HPA004174
MIM:180220 neXtProt:NX_P10826 PharmGKB:PA34226 OMA:QEVFVCI
PhylomeDB:P10826 BindingDB:P10826 ChEMBL:CHEMBL2008
EvolutionaryTrace:P10826 GenomeRNAi:5915 NextBio:23024
ArrayExpress:P10826 Bgee:P10826 CleanEx:HS_RARB
Genevestigator:P10826 GermOnline:ENSG00000077092 Uniprot:P10826
Length = 455
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 97/317 (30%), Positives = 164/317 (51%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 73 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCV 131
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNE--VESTSGTL-IEMPVERI 158
I+ +GM +E+V+ +R + K+ S + ES T ++ E+I
Sbjct: 132 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKETSKQECTESYEMTAELDDLTEKI 191
Query: 159 LEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFTT 208
+A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 192 RKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTG 251
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V T
Sbjct: 252 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFT 311
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R +
Sbjct: 312 -FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSK 370
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 371 PHMFPKILMKITDLRSI 387
>MGI|MGI:97857 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0021756 "striatum development" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IGI] [GO:0035264 "multicellular organism
growth" evidence=IGI] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043068 "positive regulation of
programmed cell death" evidence=IGI] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0048048 "embryonic eye morphogenesis"
evidence=IGI] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO] [GO:0048566 "embryonic digestive tract
development" evidence=ISO] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:97857 GO:GO:0005634 GO:GO:0008285
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0001657 GO:GO:0021756 GO:GO:0032331 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0003708 GO:GO:0061037 PDB:1XDK PDBsum:1XDK
GO:GO:0055012 eggNOG:NOG297448 HOGENOM:HOG000010312
OrthoDB:EOG4F7NK7 CTD:5915 KO:K08528 OMA:QEVFVCI EMBL:X56574
EMBL:X56569 EMBL:X56573 EMBL:S56660 EMBL:S92180 IPI:IPI00130386
IPI:IPI00230346 IPI:IPI00230347 IPI:IPI00230348 PIR:S05051
RefSeq:NP_035373.1 UniGene:Mm.259318 ProteinModelPortal:P22605
SMR:P22605 IntAct:P22605 STRING:P22605 PRIDE:P22605
Ensembl:ENSMUST00000063750 GeneID:218772 KEGG:mmu:218772
UCSC:uc007xvc.1 InParanoid:P22605 BindingDB:P22605
ChEMBL:CHEMBL3266 EvolutionaryTrace:P22605 NextBio:376409
Bgee:P22605 CleanEx:MM_RARB Genevestigator:P22605
GermOnline:ENSMUSG00000017491 Uniprot:P22605
Length = 482
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 97/317 (30%), Positives = 164/317 (51%)
Query: 44 PYPPNHPLCGSKHL--CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCI 101
P PP+ PL + C +C D++SG HYGV +CEGCKGFF+R+++K++ Y C +NC+
Sbjct: 100 PSPPS-PLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCV 158
Query: 102 IDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNE--VESTSGTL-IEMPVERI 158
I+ +GM +E+V+ +R + K+ S + ES T ++ E+I
Sbjct: 159 INKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKI 218
Query: 159 LEAEQRV--DMKQ-------EPADQDI-VNEQQATNICKATDKQLFQLVDWAKHIPHFTT 208
+A Q + Q AD + ++ + K + ++V++AK +P FT
Sbjct: 219 RKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTG 278
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL+A ++LI R +D + + G+T+ R+ H AG G + D V T
Sbjct: 279 LTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFT 338
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
+++ ++MD TE G L I L D + L+ V+ L+E + +L+ Y R +
Sbjct: 339 -FANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSK 397
Query: 329 PGRFAKLLLRLPSLRSI 345
P F K+L+++ LRSI
Sbjct: 398 PHMFPKILMKITDLRSI 414
>ZFIN|ZDB-GENE-990415-68 [details] [associations]
symbol:esrra "estrogen-related receptor alpha"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-68
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0042074 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OMA:PLPFPGS GeneTree:ENSGT00700000104391 HSSP:P20393 EMBL:BX465841
EMBL:AY556395 IPI:IPI00482428 RefSeq:NP_998120.1 UniGene:Dr.30382
SMR:Q6Q6F6 Ensembl:ENSDART00000100658 GeneID:405891 KEGG:dre:405891
InParanoid:Q6Q6F6 NextBio:20817852 Uniprot:Q6Q6F6
Length = 436
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 92/305 (30%), Positives = 152/305 (49%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 97 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYSCPASNECEITKRRRKACQACR 156
Query: 115 XXXXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMP-------------VERI 158
L +GM +E V+ +R R K + EVE+ + +P V +
Sbjct: 157 FTKCLKVGMLKEGVRLDRVRGGRQKYKRRPEVENATYQSAPIPLRKEGEKGSSSIIVSHL 216
Query: 159 LEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
L AE Q ++ T +C D++L ++ WAKHIP F +L L DQ+ +L
Sbjct: 217 LVAEPEKLFAMPDPLQPDTAQRTLTTLCDLADRELVVIIGWAKHIPGFLSLSLADQMSVL 276
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+L+ ++RS+ +D ++ A + + AG+ + + +++L + R ++
Sbjct: 277 QSVWLEVLVLGVAYRSLGCEDEVVFAEDFVLDEEMSRVAGLTEL-NAAISQLARRFRALQ 335
Query: 279 MDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLR 338
+D+ E L+ I L N D ++ + V+ LR+ ++ +L E ++P R +LLL
Sbjct: 336 LDREEFVMLKAIALTNSDSVYIEDMEAVQKLRDLLHQALLELEVQRRPDDPQRAGRLLLT 395
Query: 339 LPSLR 343
LP LR
Sbjct: 396 LPLLR 400
>UNIPROTKB|F1N0I2 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 IPI:IPI00685366
UniGene:Bt.28215 OMA:QNSNEMS EMBL:DAAA02012799 PRIDE:F1N0I2
Ensembl:ENSBTAT00000023577 Uniprot:F1N0I2
Length = 608
Score = 223 (83.6 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 45/108 (41%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++CII+
Sbjct: 113 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQ 172
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 173 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 220
Score = 199 (75.1 bits), Expect = 5.2e-35, Sum P(2) = 5.2e-35
Identities = 50/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 398 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 457
Query: 245 PGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE-----MKM--DKTELGCLRTIILFNPDV 297
V SS + + ++L E + K++E +K+ D E L+ I+LF+PD
Sbjct: 458 TFVNCLHSSLQQDKISAERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDH 517
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ + +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 518 PGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALR 563
>UNIPROTKB|Q6QMY5 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AY533243 RefSeq:NP_001002936.1 UniGene:Cfa.3916
HSSP:P11474 ProteinModelPortal:Q6QMY5 SMR:Q6QMY5 STRING:Q6QMY5
GeneID:403169 KEGG:cfa:403169 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 InParanoid:Q6QMY5 KO:K08552
OrthoDB:EOG48KRBN NextBio:20816913 Uniprot:Q6QMY5
Length = 422
Score = 228 (85.3 bits), Expect = 6.2e-35, Sum P(2) = 6.2e-35
Identities = 59/190 (31%), Positives = 103/190 (54%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 202 VVEPEKLYAMP-DPAGPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 259
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + VL +LV +++ +
Sbjct: 260 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGEL-GAVLLQLVRRLQAL 318
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 319 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 378
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 379 RLLLTLPLLR 388
Score = 176 (67.0 bits), Expect = 6.2e-35, Sum P(2) = 6.2e-35
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 136 FTKCLRVGMLKEGVRLDRVR 155
>ZFIN|ZDB-GENE-980526-531 [details] [associations]
symbol:rarga "retinoic acid receptor gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0060037 "pharyngeal system development"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-980526-531 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:BX465864 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX546466 IPI:IPI00817162
Ensembl:ENSDART00000103158 ArrayExpress:F1RAM8 Bgee:F1RAM8
Uniprot:F1RAM8
Length = 507
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 96/317 (30%), Positives = 158/317 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NC I+
Sbjct: 73 PSPPPPPRVYKP--CFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQIN 130
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEV---ES--TSGTLIEMPVERI 158
+GM +EAV+ +R + K+ +EV ES SG L E+ V ++
Sbjct: 131 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKDEVIPPESYELSGELEEL-VNKV 189
Query: 159 LEAEQRVDMKQEPADQDIVNEQQATNI----------CKATDKQLFQLVDWAKHIPHFTT 208
+A Q + N I + + K + ++V++AK +P FTT
Sbjct: 190 SKAHQETFPSLCQLGKYTTNSSSDHRIQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFTT 249
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL++ ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 250 LTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 309
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
++ ++MD TE G L I L D L+ + V+ L+E + +L+ Y R +
Sbjct: 310 -FAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPERVDRLQEPLLEALKIYARRRRPNK 368
Query: 329 PGRFAKLLLRLPSLRSI 345
P F ++L+++ LR I
Sbjct: 369 PHMFPRMLMKITDLRGI 385
>MGI|MGI:1346831 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030278 "regulation of ossification" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051216 "cartilage development" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346831
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 CTD:2101 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN OMA:PLPFPGS
EMBL:U85259 EMBL:AK156371 EMBL:BC138586 EMBL:BC171958
IPI:IPI00762735 RefSeq:NP_031979.2 UniGene:Mm.386776
ProteinModelPortal:O08580 SMR:O08580 IntAct:O08580 STRING:O08580
PhosphoSite:O08580 PRIDE:O08580 Ensembl:ENSMUST00000025906
GeneID:26379 KEGG:mmu:26379 GeneTree:ENSGT00700000104391
InParanoid:B2RRU9 ChEMBL:CHEMBL1914280 NextBio:304289 Bgee:O08580
CleanEx:MM_ESRRA Genevestigator:O08580
GermOnline:ENSMUSG00000024955 Uniprot:O08580
Length = 422
Score = 226 (84.6 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 202 VVEPEKLYAMP-DPASPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 259
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + L +LV +++ +
Sbjct: 260 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGDL-GAALLQLVRRLQAL 318
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 319 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 378
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 379 RLLLTLPLLR 388
Score = 176 (67.0 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 136 FTKCLRVGMLKEGVRLDRVR 155
>RGD|1583866 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030278 "regulation of ossification"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:1583866 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 HSSP:P11474 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN
OMA:PLPFPGS GeneTree:ENSGT00700000104391 EMBL:AY280663
EMBL:BC104701 IPI:IPI00371457 RefSeq:NP_001008511.2
UniGene:Rn.130171 ProteinModelPortal:Q5QJV7 SMR:Q5QJV7
STRING:Q5QJV7 PhosphoSite:Q5QJV7 PRIDE:Q5QJV7
Ensembl:ENSRNOT00000028697 GeneID:293701 KEGG:rno:293701
UCSC:RGD:1583866 InParanoid:Q5QJV7 NextBio:636801
Genevestigator:Q5QJV7 Uniprot:Q5QJV7
Length = 422
Score = 226 (84.6 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 202 VVEPEKLYAMP-DPASPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 259
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + L +LV +++ +
Sbjct: 260 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGDL-GAALLQLVRRLQAL 318
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 319 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 378
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 379 RLLLTLPLLR 388
Score = 176 (67.0 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 136 FTKCLRVGMLKEGVRLDRVR 155
>UNIPROTKB|P13631 [details] [associations]
symbol:RARG "Retinoic acid receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003430 "growth plate cartilage chondrocyte growth"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0031641 "regulation of
myelination" evidence=IEA] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0060534 "trachea
cartilage development" evidence=IEA] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IEA] [GO:0061037 "negative
regulation of cartilage development" evidence=IEA] [GO:0070384
"Harderian gland development" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032526 "response
to retinoic acid" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=TAS] [GO:0008361 "regulation of cell
size" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043068 "positive regulation
of programmed cell death" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0048048 "embryonic eye morphogenesis"
evidence=ISS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0016021
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 EMBL:CH471054
GO:GO:0003700 GO:GO:0008361 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
GO:GO:0048384 GO:GO:0048048 DrugBank:DB00459 GO:GO:0060740
GO:GO:0006367 GO:GO:0060070 GO:GO:0046965 GO:GO:0032331
HOVERGEN:HBG005606 GO:GO:0003708 EMBL:AC021072 CTD:5916
GO:GO:0070384 GO:GO:0061037 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB00799 EMBL:M24857 EMBL:M57707 EMBL:M38258 EMBL:AK297023
EMBL:AK297277 EMBL:AK316259 EMBL:AC073573 EMBL:BC093727
EMBL:BC093729 EMBL:M32074 EMBL:X57280 EMBL:AJ250835 EMBL:AY013703
EMBL:AY013704 IPI:IPI00427809 IPI:IPI00465344 IPI:IPI00788710
PIR:A33903 PIR:C35991 RefSeq:NP_000957.1 RefSeq:NP_001036193.1
RefSeq:NP_001230659.1 RefSeq:NP_001230661.1 UniGene:Hs.1497
UniGene:Hs.733399 PDB:1EXA PDB:1EXX PDB:1FCX PDB:1FCY PDB:1FCZ
PDB:1FD0 PDB:2LBD PDB:3LBD PDB:4LBD PDBsum:1EXA PDBsum:1EXX
PDBsum:1FCX PDBsum:1FCY PDBsum:1FCZ PDBsum:1FD0 PDBsum:2LBD
PDBsum:3LBD PDBsum:4LBD ProteinModelPortal:P13631 SMR:P13631
IntAct:P13631 STRING:P13631 PhosphoSite:P13631 DMDM:133498
PaxDb:P13631 PRIDE:P13631 DNASU:5916 Ensembl:ENST00000327550
Ensembl:ENST00000338561 Ensembl:ENST00000394426
Ensembl:ENST00000425354 Ensembl:ENST00000543726 GeneID:5916
KEGG:hsa:5916 UCSC:uc001sce.3 GeneCards:GC12M053604
H-InvDB:HIX0129677 HGNC:HGNC:9866 MIM:180190 neXtProt:NX_P13631
PharmGKB:PA34227 InParanoid:P13631 KO:K08529 OMA:RSPQPDQ
PhylomeDB:P13631 BindingDB:P13631 ChEMBL:CHEMBL2003
EvolutionaryTrace:P13631 GenomeRNAi:5916 NextBio:23030
ArrayExpress:P13631 Bgee:P13631 CleanEx:HS_RARG
Genevestigator:P13631 GermOnline:ENSG00000172819 GO:GO:0003430
GO:GO:0060534 Uniprot:P13631
Length = 454
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 93/315 (29%), Positives = 155/315 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 78 PSPPPPPRVYKP--CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL---IEMPVERILE 160
+GM +EAV+ +R + K+ E S L +E + ++ +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSPDSYELSPQLEELITKVSK 195
Query: 161 AEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTTLP 210
A Q + Q AD + + + + K + ++V++AK +P FT L
Sbjct: 196 AHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLS 255
Query: 211 LEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTEL 270
+ DQ+ LL+A ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 256 IADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA-F 314
Query: 271 VSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPG 330
++ ++MD TE G L I L D L+ + V+ L+E + +L Y R +P
Sbjct: 315 AGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPY 374
Query: 331 RFAKLLLRLPSLRSI 345
F ++L+++ LR I
Sbjct: 375 MFPRMLMKITDLRGI 389
>MGI|MGI:97858 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003708 "retinoic acid
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010468 "regulation of gene expression" evidence=IGI]
[GO:0010628 "positive regulation of gene expression" evidence=IDA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IMP] [GO:0032526 "response to retinoic acid" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0035264 "multicellular organism growth" evidence=IGI]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043068 "positive regulation of programmed cell
death" evidence=IGI] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IC;IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IMP] [GO:0048048 "embryonic eye
morphogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IMP] [GO:0048608 "reproductive
structure development" evidence=IMP] [GO:0048732 "gland
development" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0060348 "bone development" evidence=IMP]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP] [GO:0060429
"epithelium development" evidence=IMP] [GO:0060534 "trachea
cartilage development" evidence=IMP] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP] [GO:0070384
"Harderian gland development" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97858
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116 GO:GO:0048384 GO:GO:0048048
GO:GO:0060740 GO:GO:0046965 GO:GO:0032331 HOVERGEN:HBG005606
GO:GO:0003708 CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:X15848
EMBL:M34475 EMBL:M34476 EMBL:AK148064 EMBL:BC012923 EMBL:BC013709
EMBL:M32068 EMBL:M32069 EMBL:M32070 IPI:IPI00122863 IPI:IPI00320178
IPI:IPI00885347 PIR:B34714 PIR:S05052 RefSeq:NP_001036192.1
RefSeq:NP_035374.3 UniGene:Mm.1273 ProteinModelPortal:P18911
SMR:P18911 DIP:DIP-42822N MINT:MINT-2834553 STRING:P18911
PhosphoSite:P18911 PRIDE:P18911 Ensembl:ENSMUST00000043172
Ensembl:ENSMUST00000063339 GeneID:19411 KEGG:mmu:19411
UCSC:uc007she.1 InParanoid:P18911 BindingDB:P18911
ChEMBL:CHEMBL4177 NextBio:296533 Bgee:P18911 CleanEx:MM_RARG
Genevestigator:P18911 GermOnline:ENSMUSG00000001288 Uniprot:P18911
Length = 458
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 93/315 (29%), Positives = 155/315 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 78 PSPPPPPRVYKP--CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL---IEMPVERILE 160
+GM +EAV+ +R + K+ E S L +E + ++ +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSPDSYELSPQLEELITKVSK 195
Query: 161 AEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTTLP 210
A Q + Q AD + + + + K + ++V++AK +P FT L
Sbjct: 196 AHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLS 255
Query: 211 LEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTEL 270
+ DQ+ LL+A ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 256 IADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA-F 314
Query: 271 VSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPG 330
++ ++MD TE G L I L D L+ + V+ L+E + +L Y R +P
Sbjct: 315 AGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPY 374
Query: 331 RFAKLLLRLPSLRSI 345
F ++L+++ LR I
Sbjct: 375 MFPRMLMKITDLRGI 389
>RGD|3200 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048386 "positive regulation of retinoic
acid receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3200 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 EMBL:CH473960 HSSP:P03372 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:L26398 EMBL:BC061822
IPI:IPI00208150 RefSeq:NP_665723.1 UniGene:Rn.79894
ProteinModelPortal:Q8VIJ4 SMR:Q8VIJ4 STRING:Q8VIJ4 PhosphoSite:Q8VIJ4
PRIDE:Q8VIJ4 Ensembl:ENSRNOT00000009578 GeneID:252924 KEGG:rno:252924
UCSC:RGD:3200 InParanoid:Q8VIJ4 NextBio:624089 ArrayExpress:Q8VIJ4
Genevestigator:Q8VIJ4 Uniprot:Q8VIJ4
Length = 590
Score = 223 (83.6 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 45/108 (41%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++CII+
Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQ 159
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 160 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 207
Score = 194 (73.4 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 49/166 (29%), Positives = 87/166 (52%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 380 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 439
Query: 245 PGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE-----MKM--DKTELGCLRTIILFNPDV 297
V +S + + ++L E + K++E +K+ D E L+ I+LF+PD
Sbjct: 440 TFVNCLHNSLQQDKMSPERRKLLMEHIFKLQEFCNSMVKLCIDGHEYAYLKAIVLFSPDH 499
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +++E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 500 PGLENMELIEKFQEKAYVEFQDYITRTYPDDTYRLSRLLLRLPALR 545
>UNIPROTKB|Q08DD4 [details] [associations]
symbol:RARG "RARG protein" species:9913 "Bos taurus"
[GO:0070384 "Harderian gland development" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060534 "trachea cartilage development" evidence=IEA]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 HOVERGEN:HBG005606 GO:GO:0003708
CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:DAAA02012865
EMBL:BC123809 IPI:IPI00707092 RefSeq:NP_001124228.1
UniGene:Bt.53782 SMR:Q08DD4 STRING:Q08DD4
Ensembl:ENSBTAT00000009984 GeneID:540425 KEGG:bta:540425
InParanoid:Q08DD4 NextBio:20878630 Uniprot:Q08DD4
Length = 458
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 93/315 (29%), Positives = 155/315 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 78 PSPPPPPRVYKP--CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL---IEMPVERILE 160
+GM +EAV+ +R + K+ E S L +E + ++ +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSLDSYELSPQLEELITKVSK 195
Query: 161 AEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTTLP 210
A Q + Q AD + + + + K + ++V++AK +P FT L
Sbjct: 196 AHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLS 255
Query: 211 LEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTEL 270
+ DQ+ LL+A ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 256 IADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA-F 314
Query: 271 VSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPG 330
++ ++MD TE G L I L D L+ + V+ L+E + +L Y R +P
Sbjct: 315 AGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPY 374
Query: 331 RFAKLLLRLPSLRSI 345
F ++L+++ LR I
Sbjct: 375 MFPRMLMKITDLRGI 389
>UNIPROTKB|F1PN60 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 CTD:5916
GeneTree:ENSGT00680000099662 KO:K08529 OMA:RSPQPDQ
EMBL:AAEX03014990 EMBL:AAEX03014987 EMBL:AAEX03014988
EMBL:AAEX03014989 RefSeq:XP_849260.2 Ensembl:ENSCAFT00000011309
GeneID:486508 KEGG:cfa:486508 Uniprot:F1PN60
Length = 458
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 93/315 (29%), Positives = 155/315 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 78 PSPPPPPRVYKP--CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 135
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL---IEMPVERILE 160
+GM +EAV+ +R + K+ E S L +E + ++ +
Sbjct: 136 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSLDSYELSPQLEELITKVSK 195
Query: 161 AEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTTLP 210
A Q + Q AD + + + + K + ++V++AK +P FT L
Sbjct: 196 AHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLS 255
Query: 211 LEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTEL 270
+ DQ+ LL+A ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 256 IADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA-F 314
Query: 271 VSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPG 330
++ ++MD TE G L I L D L+ + V+ L+E + +L Y R +P
Sbjct: 315 AGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPY 374
Query: 331 RFAKLLLRLPSLRSI 345
F ++L+++ LR I
Sbjct: 375 MFPRMLMKITDLRGI 389
>UNIPROTKB|F1SGE6 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070384 "Harderian gland development" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060534 "trachea cartilage development"
evidence=IEA] [GO:0048048 "embryonic eye morphogenesis"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0003708 CTD:5916 GO:GO:0070384
GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529 GO:GO:0003430
GO:GO:0060534 EMBL:CU550678 RefSeq:XP_001924421.3 UniGene:Ssc.97565
Ensembl:ENSSSCT00000000277 GeneID:397221 KEGG:ssc:397221
OMA:TFNSMRS Uniprot:F1SGE6
Length = 447
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 93/315 (29%), Positives = 155/315 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 67 PSPPPPPRVYKP--CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 124
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL---IEMPVERILE 160
+GM +EAV+ +R + K+ E S L +E + ++ +
Sbjct: 125 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGSLDSYELSPQLEELITKVSK 184
Query: 161 AEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTTLP 210
A Q + Q AD + + + + K + ++V++AK +P FT L
Sbjct: 185 AHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLS 244
Query: 211 LEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTEL 270
+ DQ+ LL+A ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 245 IADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA-F 303
Query: 271 VSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPG 330
++ ++MD TE G L I L D L+ + V+ L+E + +L Y R +P
Sbjct: 304 AGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPY 363
Query: 331 RFAKLLLRLPSLRSI 345
F ++L+++ LR I
Sbjct: 364 MFPRMLMKITDLRGI 378
>UNIPROTKB|A0JNE3 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0016605 "PML body" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG297520 KO:K08543
EMBL:BC126643 IPI:IPI00685366 RefSeq:NP_001071372.1
UniGene:Bt.28215 ProteinModelPortal:A0JNE3 SMR:A0JNE3 STRING:A0JNE3
GeneID:511407 KEGG:bta:511407 CTD:7181 HOGENOM:HOG000013058
InParanoid:A0JNE3 OrthoDB:EOG476JZT NextBio:20869910 Uniprot:A0JNE3
Length = 608
Score = 221 (82.9 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 45/108 (41%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++CII+
Sbjct: 113 LCVVCGDKASGRHYGEVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQ 172
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 173 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 220
Score = 199 (75.1 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 50/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 398 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 457
Query: 245 PGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE-----MKM--DKTELGCLRTIILFNPDV 297
V SS + + ++L E + K++E +K+ D E L+ I+LF+PD
Sbjct: 458 TFVNCLHSSLQQDKISAERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDH 517
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ + +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 518 PGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALR 563
>RGD|1310102 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1310102 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 IPI:IPI00869702
Ensembl:ENSRNOT00000011890 Uniprot:F1M342
Length = 364
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 94/259 (36%), Positives = 141/259 (54%)
Query: 93 AC-REGRNCIIDXXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLI 151
+C R R C++D GMK+EAVQ ER R R S + GT I
Sbjct: 2 SCYRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRS----TYEGTNI 57
Query: 152 EMPVERILEAEQR---VDMKQEPADQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHF 206
+ + +AE R + + A DI ++ A+ ++C++ +QL LV+WAK+IP F
Sbjct: 58 PS-INTLAQAEVRSCQISVPNPSASTDINVKKIASISDVCESMKQQLLVLVEWAKYIPAF 116
Query: 207 TTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRV 266
LPL+DQV LLRA E L+ + RS+ KD +LL ++R+S E V + +RV
Sbjct: 117 CELPLDDQVALLRAHAGEHLLLGATKRSMMYKDILLLGNHYVIHRNSC-EVEVSRVANRV 175
Query: 267 LTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS 326
L ELV +E+++D E CL+ I+ F+PD +GL ++ +R +V SLE+Y
Sbjct: 176 LDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPGKIKNMRFQVQISLEDYINDRQY 235
Query: 327 EEPGRFAKLLLRLPSLRSI 345
+ GRF +LLL LP+L+SI
Sbjct: 236 DSRGRFGELLLLLPTLQSI 254
>RGD|1583230 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002063 "chondrocyte development" evidence=ISO] [GO:0003417
"growth plate cartilage development" evidence=ISO] [GO:0003430
"growth plate cartilage chondrocyte growth" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation"
evidence=IEA;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043068 "positive regulation of
programmed cell death" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046965 "retinoid X receptor binding" evidence=IEA;ISO]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO;IMP] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060348 "bone
development" evidence=ISO] [GO:0060349 "bone morphogenesis"
evidence=ISO] [GO:0060429 "epithelium development" evidence=ISO]
[GO:0060534 "trachea cartilage development" evidence=IEA;ISO]
[GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA;ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA;ISO] [GO:0070384 "Harderian gland
development" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1583230 GO:GO:0008285 GO:GO:0009952
GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0043065 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0031641 GO:GO:0003708 CTD:5916
GO:GO:0070384 GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529
GO:GO:0003430 GO:GO:0060534 IPI:IPI00914166 RefSeq:NP_001128722.1
UniGene:Rn.198797 Ensembl:ENSRNOT00000016801 GeneID:685072
KEGG:rno:685072 UCSC:RGD:1583230 ChEMBL:CHEMBL2630 NextBio:728895
ArrayExpress:D3ZWV0 Uniprot:D3ZWV0
Length = 485
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 92/315 (29%), Positives = 155/315 (49%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NCII+
Sbjct: 105 PSPPPPPRVYKP--CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIIN 162
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTL---IEMPVERILE 160
+GM +EAV+ +R + K+ E + L +E + ++ +
Sbjct: 163 KVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEVKEEGPPDNYELSPQLEELITKVSK 222
Query: 161 AEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTTLP 210
A Q + Q AD + + + + K + ++V++AK +P FT L
Sbjct: 223 AHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLS 282
Query: 211 LEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTEL 270
+ DQ+ LL+A ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 283 IADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA-F 341
Query: 271 VSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPG 330
++ ++MD TE G L I L D L+ + V+ L+E + +L Y R +P
Sbjct: 342 AGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPY 401
Query: 331 RFAKLLLRLPSLRSI 345
F ++L+++ LR I
Sbjct: 402 MFPRMLMKITDLRGI 416
>MGI|MGI:1352465 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352465 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0048386 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596 KO:K08543 CTD:7181
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:U28280 EMBL:U28269 EMBL:U28270
EMBL:U28271 EMBL:U28272 EMBL:U28273 EMBL:U28274 EMBL:U28275
EMBL:U28276 EMBL:U28277 EMBL:U28278 EMBL:U28279 EMBL:U28265
EMBL:Y11436 EMBL:U30482 EMBL:L26957 EMBL:AK146891 EMBL:AK149374
EMBL:AC127596 EMBL:AC138026 EMBL:BC090662 EMBL:BC094580
IPI:IPI00314621 IPI:IPI00656276 RefSeq:NP_035759.3
UniGene:Mm.107483 ProteinModelPortal:Q505F1 SMR:Q505F1
DIP:DIP-29275N STRING:Q505F1 PhosphoSite:Q505F1 PaxDb:Q505F1
PRIDE:Q505F1 Ensembl:ENSMUST00000092213 Ensembl:ENSMUST00000099343
Ensembl:ENSMUST00000105290 GeneID:22025 KEGG:mmu:22025
InParanoid:Q0VGP8 NextBio:301764 Bgee:Q505F1 CleanEx:MM_NR2C1
Genevestigator:Q505F1 GermOnline:ENSMUSG00000005897 Uniprot:Q505F1
Length = 590
Score = 222 (83.2 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++C+I+
Sbjct: 100 LCVVCGDKASGRHYGAITCEGCKGFFKRSIRKNLVYSCRGSKDCVINKHHRNRCQYCRLQ 159
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 160 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 207
Score = 195 (73.7 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 380 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 439
Query: 245 PGVTVYRSSAHEAGVG-----GIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V SS + + + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 440 TFVNCLHSSLQQDKMSPERRKSLMEHIFKLQEFCNSMVKLCIDGHEYAYLKAIVLFSPDH 499
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +++E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 500 PGLENMELIERFQEKAYVEFQDYITRTYPDDTYRLSRLLLRLPALR 545
>ZFIN|ZDB-GENE-070314-1 [details] [associations]
symbol:rargb "retinoic acid receptor, gamma b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 OrthoDB:EOG4F7NK7
EMBL:EF028131 IPI:IPI00679293 RefSeq:NP_001076779.1
UniGene:Dr.135572 ProteinModelPortal:A2T928 SMR:A2T928
STRING:A2T928 GeneID:100034753 KEGG:dre:100034753 CTD:100034753
NextBio:20788475 Uniprot:A2T928
Length = 489
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 95/317 (29%), Positives = 160/317 (50%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P C +C D++SG HYGV SCEGCKGFF+R+++K++ Y C +NC I+
Sbjct: 53 PSPPPPPRVYKP--CFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQIN 110
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEV---ES--TSGTLIEMPVERI 158
+GM +EAV+ +R + K+ EV ES SG L E+ V ++
Sbjct: 111 KVTRNRCQYCRLRKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSGELEEL-VNKV 169
Query: 159 LEAEQRV--DMKQ-------EPADQDIVNEQQATN-ICKATDKQLFQLVDWAKHIPHFTT 208
+A + + Q AD + + + + + K + ++V++AK +P FT+
Sbjct: 170 SKAHRETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFTS 229
Query: 209 LPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLT 268
L + DQ+ LL++ ++L+ R +D + + G+T+ R+ H AG G + D V
Sbjct: 230 LTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFA 289
Query: 269 ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEE 328
++ ++MD TE G L I L D L+ V+ L+E + +L+ Y R +
Sbjct: 290 -FAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPHRVDQLQEPLLEALKIYARRRRPNK 348
Query: 329 PGRFAKLLLRLPSLRSI 345
P F ++L+++ LR I
Sbjct: 349 PHMFPRMLMKVTDLRGI 365
>UNIPROTKB|F1NW94 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00586813
Ensembl:ENSGALT00000018481 ArrayExpress:F1NW94 Uniprot:F1NW94
Length = 562
Score = 220 (82.5 bits), Expect = 6.9e-34, Sum P(2) = 6.9e-34
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++C+I+
Sbjct: 72 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGTKDCVINKHHRNRCQYCRLQ 131
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 132 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 179
Score = 197 (74.4 bits), Expect = 6.9e-34, Sum P(2) = 6.9e-34
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC+ + LF + WA+ IP F L ++ + L++A WNEL + S + +LA
Sbjct: 352 ICETASRLLFLSMHWARSIPSFQALGQDNSISLVKACWNELFTLGLAQCSQVMNVATILA 411
Query: 245 PGVTVYRSSAHEAGVG---G--IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V S + + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 412 AFVNHLHDSLQQDKLPTDRGKLVMEHIFKLQEFCNSMVKLCLDGYEYAYLKAIVLFSPDH 471
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 472 PGLENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPALR 517
>MGI|MGI:1346833 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member
1" species:10090 "Mus musculus" [GO:0001553 "luteinization"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IGI;IMP] [GO:0009888 "tissue development"
evidence=IMP] [GO:0010259 "multicellular organismal aging"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0022414 "reproductive process" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI] [GO:0030325 "adrenal gland
development" evidence=IGI;IMP] [GO:0042445 "hormone metabolic
process" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO;IMP] [GO:2000195 "negative
regulation of female gonad development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346833 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0005543 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0003705 GO:GO:0008584 GO:GO:0003690
GO:GO:0042445 GO:GO:0051457 GO:GO:0010259 GO:GO:0001553
GO:GO:2000020 GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
PDB:1YMT PDBsum:1YMT PDB:1YP0 PDBsum:1YP0 HOVERGEN:HBG106677
EMBL:AL844842 PDB:3F7D PDBsum:3F7D CTD:2516 KO:K08560 OMA:PFGLMCK
OrthoDB:EOG4FJ891 EMBL:D10584 EMBL:S65878 EMBL:S65875 EMBL:S65919
EMBL:S65876 EMBL:S65877 EMBL:AF511594 EMBL:AK134378 EMBL:AK144376
EMBL:BC110476 EMBL:BC110477 IPI:IPI00107985 IPI:IPI00330060
PIR:A40716 PIR:A42128 RefSeq:NP_620639.1 UniGene:Mm.31387 PDB:2FF0
PDBsum:2FF0 ProteinModelPortal:P33242 SMR:P33242 STRING:P33242
PhosphoSite:P33242 PRIDE:P33242 Ensembl:ENSMUST00000028084
Ensembl:ENSMUST00000112883 GeneID:26423 KEGG:mmu:26423
InParanoid:Q812G5 ChEMBL:CHEMBL1764943 EvolutionaryTrace:P33242
NextBio:304449 Bgee:P33242 CleanEx:MM_NR5A1 Genevestigator:P33242
GermOnline:ENSMUSG00000026751 Uniprot:P33242
Length = 462
Score = 220 (82.5 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 61/203 (30%), Positives = 106/203 (52%)
Query: 150 LIEMPVERILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTL 209
L+++ E + V QEPA + +C+ D+ +VDWA+ F L
Sbjct: 231 LLQLEPEEDQVRARIVGCLQEPAKSRSDQPAPFSLLCRMADQTFISIVDWARRCMVFKEL 290
Query: 210 PLEDQVLLLRAGWNELLIASFSHRSISV--KDGILLAPGVTVYRSS-AHEAGVGGIFDRV 266
+ DQ+ LL+ W+ELL+ +R + +D ILL G V S+ A +AG + V
Sbjct: 291 EVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQEVELSTVAVQAG-SLLHSLV 349
Query: 267 LT--ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVN 324
L ELV ++ +++D+ E CL+ +ILF+ DV+ L + +V+ +EK +L +YT +
Sbjct: 350 LRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAALLDYTLCH 409
Query: 325 HSEEPGRFAKLLLRLPSLRSIEV 347
+ +F +LLL L +R++ +
Sbjct: 410 YPHCGDKFQQLLLCLVEVRALSM 432
Score = 193 (73.0 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 12 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQ 71
Query: 117 XXLNMGMKREAVQEERQR 134
L +GM+ EAV+ +R R
Sbjct: 72 KCLTVGMRLEAVRADRMR 89
>UNIPROTKB|F1MBX3 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 CTD:2101 KO:K08552 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:DAAA02063533 IPI:IPI00695134
RefSeq:NP_001178302.1 UniGene:Bt.15797 PRIDE:F1MBX3
Ensembl:ENSBTAT00000036417 GeneID:507834 KEGG:bta:507834
NextBio:20868240 Uniprot:F1MBX3
Length = 422
Score = 224 (83.9 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 202 VVEPEKLYAMP-DPAGPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 259
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + L +LV +++ +
Sbjct: 260 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGEL-GAALLQLVRRLQAL 318
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 319 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 378
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 379 RLLLTLPLLR 388
Score = 176 (67.0 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 136 FTKCLRVGMLKEGVRLDRVR 155
>UNIPROTKB|F1RQP2 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:FP312658
Ensembl:ENSSSCT00000014241 Uniprot:F1RQP2
Length = 422
Score = 224 (83.9 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 202 VVEPEKLYAMP-DPAGPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 259
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + L +LV +++ +
Sbjct: 260 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGEL-GAALLQLVRRLQAL 318
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 319 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 378
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 379 RLLLTLPLLR 388
Score = 176 (67.0 bits), Expect = 7.2e-34, Sum P(2) = 7.2e-34
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 136 FTKCLRVGMLKEGVRLDRVR 155
>UNIPROTKB|P11474 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0045667
"regulation of osteoblast differentiation" evidence=IEA]
[GO:0045670 "regulation of osteoclast differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042127
GO:GO:0051216 GO:GO:0045670 GO:GO:0006367 GO:GO:0045667 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OrthoDB:EOG48KRBN EMBL:X51416 EMBL:L38487 EMBL:AP001453
IPI:IPI00005717 IPI:IPI00792208 PIR:A29345 RefSeq:NP_004442.3
UniGene:Hs.110849 PDB:1XB7 PDB:2PJL PDB:3D24 PDB:3K6P PDBsum:1XB7
PDBsum:2PJL PDBsum:3D24 PDBsum:3K6P ProteinModelPortal:P11474
SMR:P11474 DIP:DIP-35053N IntAct:P11474 MINT:MINT-215609
STRING:P11474 PhosphoSite:P11474 DMDM:215274146 PaxDb:P11474
PRIDE:P11474 DNASU:2101 Ensembl:ENST00000000442
Ensembl:ENST00000405666 Ensembl:ENST00000406310 GeneID:2101
KEGG:hsa:2101 UCSC:uc001nzq.1 UCSC:uc001nzr.1 GeneCards:GC11P064073
HGNC:HGNC:3471 MIM:601998 neXtProt:NX_P11474 PharmGKB:PA27887
OMA:PLPFPGS BindingDB:P11474 ChEMBL:CHEMBL3429
EvolutionaryTrace:P11474 GenomeRNAi:2101 NextBio:8503
ArrayExpress:P11474 Bgee:P11474 CleanEx:HS_ESRRA
Genevestigator:P11474 GermOnline:ENSG00000173153 Uniprot:P11474
Length = 423
Score = 224 (83.9 bits), Expect = 7.3e-34, Sum P(2) = 7.3e-34
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 203 VVEPEKLYAMP-DPAGPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 260
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + L +LV +++ +
Sbjct: 261 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGEL-GAALLQLVRRLQAL 319
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 320 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 379
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 380 RLLLTLPLLR 389
Score = 176 (67.0 bits), Expect = 7.3e-34, Sum P(2) = 7.3e-34
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 76 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 135
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 136 FTKCLRVGMLKEGVRLDRVR 155
>ZFIN|ZDB-GENE-040616-3 [details] [associations]
symbol:esrrd "estrogen-related receptor delta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-3 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104391 EMBL:CABZ01076181
EMBL:CABZ01076182 IPI:IPI00898096 Ensembl:ENSDART00000125432
Bgee:F1Q8K8 Uniprot:F1Q8K8
Length = 431
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 95/307 (30%), Positives = 153/307 (49%)
Query: 53 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRK-DLSYACREGRNCIIDXXXXXXXX 111
G K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C +C I
Sbjct: 94 GPKRLCLVCGDFASGYHYGVASCEACKAFFKRTIQAGNIEYSCPVVNDCEITKRRRKSCQ 153
Query: 112 XXXXXXXLNMGMKREA------VQEERQRTKER-DSN-EVES-TSGTLIEMPVERILEAE 162
L GM REA V+ RQ+ K R DS V S T+ T P+ L E
Sbjct: 154 ACRFQKCLRAGMMREAGVRMDRVRGGRQKYKRRVDSTLSVFSKTAYTHANKPIRNRLICE 213
Query: 163 ----QRVDMKQEPADQDIVNEQQAT--NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVL 216
+ ++ P D + T +C +++L ++ WAKHIP F L L DQ+
Sbjct: 214 LLLCEVTPLRAAP-DSSTPDSDLKTLMTLCDLLNRELLVMIGWAKHIPGFCALSLLDQMA 272
Query: 217 LLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE 276
LL++GW E L+ + + RS ++ + + A + + S + AG+ ++ L L + ++
Sbjct: 273 LLQSGWMETLLLNVAWRSQALAEELQFAENLRLNESQSQAAGLHDLYT-ALRHLTCRYQQ 331
Query: 277 MKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLL 336
M + + E L+ + L N D ++ + V+ ++ ++ +L+E+ H E R ++L
Sbjct: 332 MSLKQEEFIILKAMALANSDAENVEGAEAVQCFQDALHEALQEFEISQHPSEAHRAGRML 391
Query: 337 LRLPSLR 343
+ LP LR
Sbjct: 392 MTLPLLR 398
>UNIPROTKB|B7Z3E4 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR354565 UniGene:Hs.388034 HGNC:HGNC:10478
ChiTaRS:RXRB EMBL:AK295759 IPI:IPI00922754 SMR:B7Z3E4 STRING:B7Z3E4
Ensembl:ENST00000413614 Ensembl:ENST00000549096
Ensembl:ENST00000549320 Ensembl:ENST00000551433
Ensembl:ENST00000553107 UCSC:uc003ode.1 HOVERGEN:HBG105962
Uniprot:B7Z3E4
Length = 286
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 72/127 (56%), Positives = 87/127 (68%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP P G K LC+ICGDR+SGKHYGVYSCEGCKGFFKRT+RKDL+Y+CR+ ++C +D
Sbjct: 96 PPPPGGPGAG-KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVD 154
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQ 163
L GMKREAVQEERQR K++D + E G EMPV+RILEAE
Sbjct: 155 KRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDG-EGAGGAPEEMPVDRILEAEL 213
Query: 164 RVDMKQE 170
V+ K +
Sbjct: 214 AVEQKSD 220
>UNIPROTKB|E1BZA2 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0016605 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 GO:GO:0048386
GeneTree:ENSGT00700000104390 OMA:QNSNEMS EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00681663
Ensembl:ENSGALT00000030638 ArrayExpress:E1BZA2 Uniprot:E1BZA2
Length = 639
Score = 220 (82.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++C+I+
Sbjct: 149 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGTKDCVINKHHRNRCQYCRLQ 208
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 209 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 256
Score = 197 (74.4 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
IC+ + LF + WA+ IP F L ++ + L++A WNEL + S + +LA
Sbjct: 429 ICETASRLLFLSMHWARSIPSFQALGQDNSISLVKACWNELFTLGLAQCSQVMNVATILA 488
Query: 245 PGVTVYRSSAHEAGVG---G--IFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDV 297
V S + + G + + + L E + M ++ +D E L+ I+LF+PD
Sbjct: 489 AFVNHLHDSLQQDKLPTDRGKLVMEHIFKLQEFCNSMVKLCLDGYEYAYLKAIVLFSPDH 548
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 549 PGLENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPALR 594
>UNIPROTKB|P13056 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0048386
"positive regulation of retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471054 GO:GO:0003700 GO:GO:0000122 GO:GO:0048386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway eggNOG:NOG297520
HOVERGEN:HBG008596 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT EMBL:M21985 EMBL:M29959 EMBL:M29960 EMBL:AK291319
EMBL:AC011598 EMBL:BC040141 IPI:IPI00019051 IPI:IPI00334759
IPI:IPI00798023 PIR:A31521 PIR:A36738 PIR:B36738
RefSeq:NP_001027458.1 RefSeq:NP_001120834.1 RefSeq:NP_003288.2
UniGene:Hs.108301 UniGene:Hs.707524 ProteinModelPortal:P13056
SMR:P13056 IntAct:P13056 STRING:P13056 PhosphoSite:P13056
DMDM:226693548 PRIDE:P13056 DNASU:7181 Ensembl:ENST00000330677
Ensembl:ENST00000333003 Ensembl:ENST00000393101 GeneID:7181
KEGG:hsa:7181 UCSC:uc001tdm.4 UCSC:uc001tdn.4 UCSC:uc001tdo.4
GeneCards:GC12M095414 HGNC:HGNC:7971 HPA:CAB010395 MIM:601529
neXtProt:NX_P13056 PharmGKB:PA31754 OMA:QNSNEMS PhylomeDB:P13056
ChEMBL:CHEMBL1961787 GenomeRNAi:7181 NextBio:28152 Bgee:P13056
CleanEx:HS_NR2C1 Genevestigator:P13056 GermOnline:ENSG00000120798
Uniprot:P13056
Length = 603
Score = 223 (83.6 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 45/108 (41%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++CII+
Sbjct: 112 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQ 171
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GMK+++VQ ER+ ++E+ SN ST I + L A
Sbjct: 172 RCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTA 219
Score = 186 (70.5 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 393 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 452
Query: 245 PGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE-----MKM--DKTELGCLRTIILFNPDV 297
V +S + + ++L E + K++E +K+ D E L+ I+LF+PD
Sbjct: 453 TFVNCLHNSLQQDKMSTERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDH 512
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
L++ + +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 513 PSLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALR 558
>RGD|68350 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member 1"
species:10116 "Rattus norvegicus" [GO:0001553 "luteinization"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005543 "phospholipid binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA;ISO] [GO:0008585
"female gonad development" evidence=IEP] [GO:0009888 "tissue
development" evidence=IEA;ISO] [GO:0010259 "multicellular organismal
aging" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0022414 "reproductive process" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030325
"adrenal gland development" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=NAS]
[GO:0042445 "hormone metabolic process" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA;ISO]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA;ISO] [GO:2000195 "negative regulation of female gonad
development" evidence=IEA;ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:68350 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325 GO:GO:0008585
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003690 GO:GO:0051457 GO:GO:0001553
GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 EMBL:D42156 IPI:IPI00199452 PIR:A56120
RefSeq:NP_001178028.1 UniGene:Rn.229378 ProteinModelPortal:P50569
SMR:P50569 STRING:P50569 PhosphoSite:P50569 PRIDE:P50569
Ensembl:ENSRNOT00000017651 GeneID:83826 KEGG:rno:83826
UCSC:RGD:68350 InParanoid:P50569 NextBio:616450 ArrayExpress:P50569
Genevestigator:P50569 GermOnline:ENSRNOG00000012682 Uniprot:P50569
Length = 462
Score = 219 (82.2 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 61/203 (30%), Positives = 106/203 (52%)
Query: 150 LIEMPVERILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTL 209
L+++ E + V QEPA + +C+ D+ +VDWA+ F L
Sbjct: 231 LLQLEPEEDQVRARIVGCLQEPAKSRPDQPAPFSLLCRMADQTFISIVDWARRCMVFKEL 290
Query: 210 PLEDQVLLLRAGWNELLIASFSHRSISV--KDGILLAPGVTVYRSS-AHEAGVGGIFDRV 266
+ DQ+ LL+ W+ELL+ +R + +D ILL G V S+ A +AG + V
Sbjct: 291 EVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQEVELSTVAVQAG-SLLHSLV 349
Query: 267 LT--ELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVN 324
L ELV ++ +++D+ E CL+ +ILF+ DV+ L + +V+ +EK +L +YT +
Sbjct: 350 LRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEKANAALLDYTLCH 409
Query: 325 HSEEPGRFAKLLLRLPSLRSIEV 347
+ +F +LLL L +R++ +
Sbjct: 410 YPHCGDKFQQLLLCLVEVRALSM 432
Score = 193 (73.0 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 12 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQ 71
Query: 117 XXLNMGMKREAVQEERQR 134
L +GM+ EAV+ +R R
Sbjct: 72 KCLTVGMRLEAVRADRMR 89
>UNIPROTKB|E2QX37 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181
OMA:QNSNEMS EMBL:AAEX03009951 RefSeq:XP_854792.1
ProteinModelPortal:E2QX37 Ensembl:ENSCAFT00000010109 GeneID:611980
KEGG:cfa:611980 NextBio:20897515 Uniprot:E2QX37
Length = 605
Score = 220 (82.5 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ASG+HYG +CEGCKGFFKR++RK+L Y+CR ++CII+
Sbjct: 113 LCVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQ 172
Query: 117 XXLNMGMKREAVQEERQR---TKERDSNEVESTSGTLIEMPVERILEA 161
+ GM++++VQ ER+ ++E+ SN ST I + L A
Sbjct: 173 RCIAFGMRQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLAA 220
Score = 195 (73.7 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 50/166 (30%), Positives = 86/166 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLA 244
I ++ + LF + WA IP F L E+ + L++A WNEL + + +LA
Sbjct: 395 IGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILA 454
Query: 245 PGVTVYRSSAHEAGVGGIFDRVLTELVSKMRE-----MKM--DKTELGCLRTIILFNPDV 297
V SS + + ++L E + K++E +K+ D E L+ I+LF+PD
Sbjct: 455 TFVNCLHSSLQQDKMSTERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDH 514
Query: 298 RGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
GL++ + +E +EK Y ++Y + ++ R ++LLLRLP+LR
Sbjct: 515 PGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALR 560
>FB|FBgn0034012 [details] [associations]
symbol:Hr51 "Hormone receptor 51" species:7227 "Drosophila
melanogaster" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003707 "steroid
hormone receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0020037 "heme binding" evidence=IDA]
[GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP]
[GO:0016319 "mushroom body development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0020037 GO:GO:0016319 GO:GO:0048526
eggNOG:NOG277339 KO:K08546 OMA:MLSQHTK EMBL:BT122090
RefSeq:NP_611032.2 UniGene:Dm.16048 SMR:A1ZA01 STRING:A1ZA01
EnsemblMetazoa:FBtr0114456 GeneID:36702 KEGG:dme:Dmel_CG16801
CTD:36702 FlyBase:FBgn0034012 InParanoid:A1ZA01 OrthoDB:EOG4NCJVD
GenomeRNAi:36702 NextBio:799957 Uniprot:A1ZA01
Length = 582
Score = 213 (80.0 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 56/180 (31%), Positives = 90/180 (50%)
Query: 181 QATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDG 240
Q + + + + LF V WAK++P F L DQV+LL W+EL + + +++
Sbjct: 380 QHETVYETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLN------AIQWC 433
Query: 241 ILLAP-GVTVYRSSAH----EAGVGG---------IFD-RVLTELVSKMREMKMDKTELG 285
I L P G ++ + H E G D R L E+ K + + +D E
Sbjct: 434 IPLDPTGCALFSVAEHCNNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFA 493
Query: 286 CLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
CL+ I+LF P+ RGLK +E L+++ + L ++T+ + + RF +LLL LP LR I
Sbjct: 494 CLKAIVLFRPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMI 553
Score = 205 (77.2 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRN-CIIDXXXXXXXXXXXX 115
+C +CGD +SGKHYG+ +C GC GFFKR+VR+ L Y C+ G C++D
Sbjct: 110 ICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCVVDKAHRNQCQACRL 169
Query: 116 XXXLNMGMKREAVQEERQ 133
L MGM ++AVQ ERQ
Sbjct: 170 KKCLQMGMNKDAVQNERQ 187
>UNIPROTKB|F1PFF7 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:AAEX03011644
Ensembl:ENSCAFT00000022969 Uniprot:F1PFF7
Length = 613
Score = 224 (83.9 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 58/190 (30%), Positives = 102/190 (53%)
Query: 158 ILEAEQRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLL 217
++E E+ M +PA D AT +C D+++ + WAK IP F++L L DQ+ +
Sbjct: 393 VVEPEKLYAMP-DPAGPDGHLPAVAT-LCDLFDREIVVTISWAKSIPGFSSLSLSDQMSV 450
Query: 218 LRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREM 277
L++ W E+L+ + RS+ ++D + A + + A AG+G + L +LV +++ +
Sbjct: 451 LQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGEL-GAALLQLVRRLQAL 509
Query: 278 KMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYT--RVNHS--EEPGRFA 333
++++ E L+ + L N D ++ + VE LRE ++ +L EY R E R
Sbjct: 510 RLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAG 569
Query: 334 KLLLRLPSLR 343
+LLL LP LR
Sbjct: 570 RLLLTLPLLR 579
Score = 176 (67.0 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 34/80 (42%), Positives = 43/80 (53%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ + Y+C C I
Sbjct: 267 KRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACR 326
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GM +E V+ +R R
Sbjct: 327 FTKCLRVGMLKEGVRLDRVR 346
>UNIPROTKB|P79387 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0008289
eggNOG:NOG240365 EMBL:AP009124 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OrthoDB:EOG4FJ891 EMBL:U84399 RefSeq:NP_999344.1 UniGene:Ssc.82462
UniGene:Ssc.82473 ProteinModelPortal:P79387 SMR:P79387
STRING:P79387 GeneID:397368 KEGG:ssc:397368 Uniprot:P79387
Length = 461
Score = 215 (80.7 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 59/184 (32%), Positives = 101/184 (54%)
Query: 169 QEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIA 228
QEPA + +C+ D+ +VDWA+ F L + DQ+ LL+ W+ELL+
Sbjct: 249 QEPAKGRPDQPAPFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVF 308
Query: 229 SFSHRSISV-KDG-ILLAPGVTVYRSS-AHEAG--VGGIFDRVLTELVSKMREMKMDKTE 283
+R I K+G ILL G V ++ A +AG + G+ R ELV ++ +++D+ E
Sbjct: 309 DHIYRQIQHGKEGSILLVTGQEVELTTVAAQAGSLLHGLVLRA-QELVLQLHALQLDRQE 367
Query: 284 LGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
CL+ +ILF+ DV+ L + +V+ +EK +L +YT ++ +F +LLL L +R
Sbjct: 368 FVCLKFLILFSLDVKFLNNHSLVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVR 427
Query: 344 SIEV 347
++ +
Sbjct: 428 ALSM 431
Score = 193 (73.0 bits), Expect = 9.9e-33, Sum P(2) = 9.9e-33
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 12 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQ 71
Query: 117 XXLNMGMKREAVQEERQR 134
L +GM+ EAV+ +R R
Sbjct: 72 KCLTVGMRLEAVRADRMR 89
>UNIPROTKB|Q04752 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=ISS;IMP] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003707 "steroid hormone receptor activity" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:2000195 "negative regulation of female gonad development"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:0051457 "maintenance of protein
location in nucleus" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001553 "luteinization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0003705 GO:GO:0008584
GO:GO:0051457 GO:GO:0001553 GO:GO:0009888 GO:GO:2000195
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 HOGENOM:HOG000063718 HOVERGEN:HBG106677
EMBL:D13569 EMBL:S45997 IPI:IPI00707901 PIR:A46077
RefSeq:NP_776828.1 UniGene:Bt.7422 ProteinModelPortal:Q04752
SMR:Q04752 IntAct:Q04752 STRING:Q04752 Ensembl:ENSBTAT00000011869
GeneID:281948 KEGG:bta:281948 CTD:2516 InParanoid:Q04752 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 NextBio:20805824 Uniprot:Q04752
Length = 461
Score = 212 (79.7 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 59/184 (32%), Positives = 100/184 (54%)
Query: 169 QEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIA 228
QEPA + +C+ D+ +VDWA+ F L + DQ+ LL+ W+ELL+
Sbjct: 249 QEPAKGRPDQPAPFSLLCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVF 308
Query: 229 SFSHRSISV-KDG-ILLAPGVTVYRSS-AHEAGVGGIFDRVLT--ELVSKMREMKMDKTE 283
+R I K+G ILL G V ++ A +AG + VL ELV ++ +++D+ E
Sbjct: 309 DHIYRQIQHGKEGSILLVTGQEVELTTVAAQAG-SLLHSLVLRAQELVLQLHALQLDRQE 367
Query: 284 LGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLR 343
CL+ +ILF+ DV+ L + +V+ +EK +L +YT ++ +F +LLL L +R
Sbjct: 368 FVCLKFLILFSLDVKFLNNHSLVKEAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVR 427
Query: 344 SIEV 347
++ +
Sbjct: 428 ALSM 431
Score = 193 (73.0 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 12 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQ 71
Query: 117 XXLNMGMKREAVQEERQR 134
L +GM+ EAV+ +R R
Sbjct: 72 KCLTVGMRLEAVRADRMR 89
>UNIPROTKB|C9JU32 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOGENOM:HOG000233467 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 HGNC:HGNC:3474 ChiTaRS:ESRRG
IPI:IPI00946882 ProteinModelPortal:C9JU32 SMR:C9JU32 STRING:C9JU32
Ensembl:ENST00000475275 ArrayExpress:C9JU32 Bgee:C9JU32
Uniprot:C9JU32
Length = 354
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 88/256 (34%), Positives = 135/256 (52%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
K LC +CGD ASG HYGV SCE CK FFKRT++ ++ Y+C C I
Sbjct: 102 KRLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACR 161
Query: 115 XXXXLNMGMKREAVQEER-----QRTKER-DSNEVESTSGTLIE---MP----VERILEA 161
L +GM +E V+ +R Q+ K R D+ + L++ P V +L A
Sbjct: 162 FMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKKPYNKIVSHLLVA 221
Query: 162 E-QRVDMKQEPA--DQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLL 218
E +++ +P D DI + T +C D++L ++ WAKHIP F+TL L DQ+ LL
Sbjct: 222 EPEKIYAMPDPTVPDSDI---KALTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLL 278
Query: 219 RAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMK 278
++ W E+LI +RS+S +D ++ A + + AG+ + + +L +LV K + MK
Sbjct: 279 QSAWMEILILGVVYRSLSFEDELVYADDYIMDEDQSKLAGLLDLNNAIL-QLVKKYKSMK 337
Query: 279 MDKTELGCLRTIILFN 294
++K E L+ I L N
Sbjct: 338 LEKEEFVTLKAIALAN 353
>WB|WBGene00003659 [details] [associations]
symbol:nhr-69 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:Z83240
KO:K07295 EMBL:AY204178 PIR:T25211 RefSeq:NP_492615.2
UniGene:Cel.18404 ProteinModelPortal:P91829 SMR:P91829
DIP:DIP-24463N IntAct:P91829 MINT:MINT-117310 STRING:P91829
PaxDb:P91829 EnsemblMetazoa:T23H4.2 GeneID:172840
KEGG:cel:CELE_T23H4.2 UCSC:T23H4.2.1 CTD:172840 WormBase:T23H4.2
InParanoid:P91829 OMA:LEMEEAN NextBio:877225 Uniprot:P91829
Length = 373
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 87/279 (31%), Positives = 139/279 (49%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ +C IC D+++GKHYG SC+GCKGFF+R++RK Y CR +NC +
Sbjct: 3 EEICHICNDKSTGKHYGAISCDGCKGFFRRSIRKRYHYQCRFEQNCDVTKNKRNACRACR 62
Query: 115 XXXXLNMGMKREAVQEERQ---RTKERDSNEVESTSGTLI--EMPVERILEAEQRVDMKQ 169
+ GMK A+Q ER + K+ E E L+ E +++ + +
Sbjct: 63 LQKCVKAGMKSNAIQNERDAIGKRKKTTGAEKEDLIDQLVAAETLCQQLRSSVIKNTSSL 122
Query: 170 EPADQDIV--NEQQAT-----NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGW 222
P D V N + A +I K+ +QL ++WAK +P F+ L DQ LL+ G
Sbjct: 123 APYDCGKVKWNYEDARAATLDDIGKSIHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGA 182
Query: 223 NELLIASFSHRSI--SVKDGILLAPGVTVYRSSAHEAG-VGGIFDRVLTELVSKMREMKM 279
+++ ++RSI +V++ I LA + + A + G + + R++ E+V+ MR + M
Sbjct: 183 ASIIVLGVAYRSICLTVENTICLANDTLLPKEHATQVGDINCVVGRIIDEIVNPMRRLNM 242
Query: 280 DKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLE 318
D E L+ I+ FNP VR + Q VE R SL+
Sbjct: 243 DLIEYVALKAILFFNPVVREINDQSPVENARYAFLRSLQ 281
Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 56/171 (32%), Positives = 91/171 (53%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSI--SVKDGI 241
+I K+ +QL ++WAK +P F+ L DQ LL+ G +++ ++RSI +V++ I
Sbjct: 144 DIGKSIHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTI 203
Query: 242 LLAPGVTVYRSSAHEAG-VGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL 300
LA + + A + G + + R++ E+V+ MR + MD E L+ I+ FNP VR +
Sbjct: 204 CLANDTLLPKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFFNPVVREI 263
Query: 301 KSQQVVEMLREKVYTSLEEYTR---VNHSEEPG---RFAKLLLRLPSLRSI 345
Q VE R SL+ + + E+ R KLLL LPSL++I
Sbjct: 264 NDQSPVENARYAFLRSLQRRCTDKALENMEDESMDCRSGKLLLLLPSLQAI 314
>UNIPROTKB|P91829 [details] [associations]
symbol:nhr-69 "Nuclear hormone receptor family member
nhr-69" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:Z83240
KO:K07295 EMBL:AY204178 PIR:T25211 RefSeq:NP_492615.2
UniGene:Cel.18404 ProteinModelPortal:P91829 SMR:P91829
DIP:DIP-24463N IntAct:P91829 MINT:MINT-117310 STRING:P91829
PaxDb:P91829 EnsemblMetazoa:T23H4.2 GeneID:172840
KEGG:cel:CELE_T23H4.2 UCSC:T23H4.2.1 CTD:172840 WormBase:T23H4.2
InParanoid:P91829 OMA:LEMEEAN NextBio:877225 Uniprot:P91829
Length = 373
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 87/279 (31%), Positives = 139/279 (49%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ +C IC D+++GKHYG SC+GCKGFF+R++RK Y CR +NC +
Sbjct: 3 EEICHICNDKSTGKHYGAISCDGCKGFFRRSIRKRYHYQCRFEQNCDVTKNKRNACRACR 62
Query: 115 XXXXLNMGMKREAVQEERQ---RTKERDSNEVESTSGTLI--EMPVERILEAEQRVDMKQ 169
+ GMK A+Q ER + K+ E E L+ E +++ + +
Sbjct: 63 LQKCVKAGMKSNAIQNERDAIGKRKKTTGAEKEDLIDQLVAAETLCQQLRSSVIKNTSSL 122
Query: 170 EPADQDIV--NEQQAT-----NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGW 222
P D V N + A +I K+ +QL ++WAK +P F+ L DQ LL+ G
Sbjct: 123 APYDCGKVKWNYEDARAATLDDIGKSIHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGA 182
Query: 223 NELLIASFSHRSI--SVKDGILLAPGVTVYRSSAHEAG-VGGIFDRVLTELVSKMREMKM 279
+++ ++RSI +V++ I LA + + A + G + + R++ E+V+ MR + M
Sbjct: 183 ASIIVLGVAYRSICLTVENTICLANDTLLPKEHATQVGDINCVVGRIIDEIVNPMRRLNM 242
Query: 280 DKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLE 318
D E L+ I+ FNP VR + Q VE R SL+
Sbjct: 243 DLIEYVALKAILFFNPVVREINDQSPVENARYAFLRSLQ 281
Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 56/171 (32%), Positives = 91/171 (53%)
Query: 184 NICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSI--SVKDGI 241
+I K+ +QL ++WAK +P F+ L DQ LL+ G +++ ++RSI +V++ I
Sbjct: 144 DIGKSIHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTI 203
Query: 242 LLAPGVTVYRSSAHEAG-VGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL 300
LA + + A + G + + R++ E+V+ MR + MD E L+ I+ FNP VR +
Sbjct: 204 CLANDTLLPKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFFNPVVREI 263
Query: 301 KSQQVVEMLREKVYTSLEEYTR---VNHSEEPG---RFAKLLLRLPSLRSI 345
Q VE R SL+ + + E+ R KLLL LPSL++I
Sbjct: 264 NDQSPVENARYAFLRSLQRRCTDKALENMEDESMDCRSGKLLLLLPSLQAI 314
>FB|FBgn0015381 [details] [associations]
symbol:dsf "dissatisfaction" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0018993
"somatic sex determination" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0007530 "sex determination" evidence=TAS]
[GO:0007619 "courtship behavior" evidence=NAS;TAS] [GO:0007617
"mating behavior" evidence=NAS] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA;NAS] [GO:0007620 "copulation"
evidence=NAS] [GO:0018991 "oviposition" evidence=NAS;TAS]
[GO:0045924 "regulation of female receptivity" evidence=NAS]
[GO:0008049 "male courtship behavior" evidence=TAS] [GO:0001078
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0048047 "mating
behavior, sex discrimination" evidence=TAS] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035206 "regulation of hemocyte
proliferation" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0018991
GO:GO:0046872 GO:GO:0004879 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045924 GO:GO:0008049 GO:GO:0035206
GO:GO:0048047 GO:GO:0007620 GO:GO:0018993 HSSP:P19793 EMBL:AF106677
ProteinModelPortal:O96680 SMR:O96680 STRING:O96680 PRIDE:O96680
FlyBase:FBgn0015381 eggNOG:NOG242640 InParanoid:O96680
OrthoDB:EOG4MW6NV ArrayExpress:O96680 Bgee:O96680 Uniprot:O96680
Length = 693
Score = 217 (81.4 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 52/159 (32%), Positives = 86/159 (54%)
Query: 187 KATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPG 246
+ T + LF V W K + F TL DQ LLL+ W EL + + + +I + +L
Sbjct: 501 ETTARLLFMAVRWVKCLMPFQTLSKNDQHLLLQESWKELFLLNLAQWTIPLDLTPILESP 560
Query: 247 VTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVV 306
+ R EA + + + E++ + R++ D +E+GC++ I LF P+ GL Q V
Sbjct: 561 LIRERVLQDEATQTEM--KTIQEILCRFRQITPDGSEVGCMKAIALFAPETAGLCDVQPV 618
Query: 307 EMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
EML+++ L ++ R+ + + RF +LLL LPSLR+I
Sbjct: 619 EMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTI 657
Score = 182 (69.1 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACR-----EGRNCIIDXXXXXXXXX 112
C +CGDR+SGKHYG+YSC+GC GFFKR++ ++ Y C+ +GR C +D
Sbjct: 13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGR-CPVDKTHRNQCRA 71
Query: 113 XXXXXXLNMGMKREAVQEERQRTKER 138
M ++AVQ ER K +
Sbjct: 72 CRLAKCFQSAMNKDAVQHERGPRKPK 97
>UNIPROTKB|E1C6K9 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0033554 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0001975 GO:GO:0043524 GO:GO:0042416 GO:GO:0042053
GO:GO:0016265 GO:GO:0030522 GO:GO:0043576 KO:K08558
GeneTree:ENSGT00640000091364 CTD:4929 OMA:MWEDPGS EMBL:AADN02017061
IPI:IPI00579183 RefSeq:XP_422166.2 Ensembl:ENSGALT00000020478
GeneID:424320 KEGG:gga:424320 NextBio:20826667 Uniprot:E1C6K9
Length = 598
Score = 347 (127.2 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 93/320 (29%), Positives = 154/320 (48%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP FT
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFT 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKTDQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>UNIPROTKB|Q08E53 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9913 "Bos taurus" [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043085
"positive regulation of catalytic activity" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042053 "regulation of
dopamine metabolic process" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0031668 "cellular response to
extracellular stimulus" evidence=IEA] [GO:0021986 "habenula
development" evidence=IEA] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0006351 GO:GO:0009791 GO:GO:0042416
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0030522
GO:GO:0043576 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:BC123415 IPI:IPI00708375
RefSeq:NP_001069676.1 UniGene:Bt.25332 ProteinModelPortal:Q08E53
SMR:Q08E53 STRING:Q08E53 Ensembl:ENSBTAT00000004758 GeneID:540245
KEGG:bta:540245 CTD:4929 InParanoid:Q08E53 OMA:MWEDPGS
OrthoDB:EOG40CHGK NextBio:20878513 Uniprot:Q08E53
Length = 598
Score = 347 (127.2 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 93/320 (29%), Positives = 154/320 (48%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP FT
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFT 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>FB|FBgn0003651 [details] [associations]
symbol:svp "seven up" species:7227 "Drosophila melanogaster"
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0007503 "fat body development" evidence=TAS] [GO:0061331
"epithelial cell proliferation involved in Malpighian tubule
morphogenesis" evidence=IMP] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048749
"compound eye development" evidence=NAS] [GO:0004872 "receptor
activity" evidence=NAS;TAS] [GO:0001752 "compound eye photoreceptor
fate commitment" evidence=TAS] [GO:0007465 "R7 cell fate
commitment" evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=TAS] [GO:0007462 "R1/R6 cell fate commitment"
evidence=TAS] [GO:0007510 "cardioblast cell fate determination"
evidence=IGI;IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007507
"heart development" evidence=NAS;TAS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=NAS] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007419
"ventral cord development" evidence=TAS] [GO:0042331 "phototaxis"
evidence=IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0046530
"photoreceptor cell differentiation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0007601 UniGene:Dm.20676 GeneID:41491
KEGG:dme:Dmel_CG11502 CTD:41491 FlyBase:FBgn0003651
GeneTree:ENSGT00670000097509 KO:K14032 GenomeRNAi:41491
NextBio:824138 GermOnline:CG11502 GO:GO:0004879 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 GO:GO:0007510
GO:GO:0061331 GO:GO:0007503 GO:GO:0007270 GO:GO:0042331
GO:GO:0007462 GO:GO:0007464 GO:GO:0007465 GO:GO:0007419
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:M28864
PIR:B32693 RefSeq:NP_731681.1 ProteinModelPortal:P16376 SMR:P16376
STRING:P16376 EnsemblMetazoa:FBtr0082563 InParanoid:P16376
PhylomeDB:P16376 Bgee:P16376 Uniprot:P16376
Length = 746
Score = 350 (128.3 bits), Expect = 4.9e-31, P = 4.9e-31
Identities = 88/253 (34%), Positives = 126/253 (49%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C +CGD++SGKHYG ++CEGCK FFKR+VR++L+Y+CR RNC ID
Sbjct: 200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKK 259
Query: 118 XLNMGMKREAVQEER--------------QRTKERDSNEVESTSG-TLIEMPVERILEAE 162
L MGM+REAVQ R + D + +G + + + +L AE
Sbjct: 260 CLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANGDPMGIAGFNGHSYLSSYISLLLRAE 319
Query: 163 QRVDMKQEPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGW 222
+ Q N NIC+ + LF V+WAK+IP F L + DQV LLR W
Sbjct: 320 PYPTSRYGQCMQPN-NIMGIDNICELAARLLFSAVEWAKNIPFFPELQVTDQVALLRLVW 378
Query: 223 NELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFD--RVLTELVSKMREMKMD 280
+EL + + S S+ + LLA ++ S V D R+ E V K++ + +D
Sbjct: 379 SELFVLNASQCSMPLHVAPLLA-AAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVD 437
Query: 281 KTELGCLRTIILF 293
E CL+ I+LF
Sbjct: 438 SAEYSCLKAIVLF 450
>UNIPROTKB|G3V9L8 [details] [associations]
symbol:Nr1d1 "Nuclear receptor subfamily 1 group D member
1" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010871 "negative
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:628827 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:CH473948
GeneTree:ENSGT00700000104109 CTD:9572 KO:K03728 RefSeq:NP_665718.2
UniGene:Rn.29848 GeneID:252917 KEGG:rno:252917 NextBio:624049
Ensembl:ENSRNOT00000055333 Uniprot:G3V9L8
Length = 508
Score = 211 (79.3 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 343 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 399
Query: 255 HEAGVGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + K+ + + + ELG ++L + D G+++ VE L+E
Sbjct: 400 QELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQET 459
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 460 LLRALRALVLKNRPSETSRFTKLLLKLPDLRTL 492
Score = 184 (69.8 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
Identities = 39/98 (39%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 19 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 78
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E+++
Sbjct: 79 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQN 116
>UNIPROTKB|E2R4U0 [details] [associations]
symbol:NR1D1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0034144 "negative
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 GeneTree:ENSGT00700000104109
GO:GO:0034144 CTD:9572 KO:K03728 OMA:SCHQPNS GO:GO:0010871
EMBL:AAEX03006466 RefSeq:XP_003435298.1 ProteinModelPortal:E2R4U0
Ensembl:ENSCAFT00000025626 GeneID:100688236 KEGG:cfa:100688236
Uniprot:E2R4U0
Length = 612
Score = 211 (79.3 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 447 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 503
Query: 255 HEAGVGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + K+ + + + ELG ++L + D G+++ VE L+E
Sbjct: 504 QELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQET 563
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 564 LLRALRALVLKNRPSETSRFTKLLLKLPDLRTL 596
Score = 187 (70.9 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 123 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 182
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E++S
Sbjct: 183 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQS 220
>UNIPROTKB|Q08E02 [details] [associations]
symbol:NR1D1 "Nuclear receptor subfamily 1 group D member
1" species:9913 "Bos taurus" [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0034144 "negative
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 GO:GO:0034144 EMBL:BC123488
IPI:IPI00716259 RefSeq:NP_001071568.1 UniGene:Bt.65340
ProteinModelPortal:Q08E02 SMR:Q08E02 STRING:Q08E02 PRIDE:Q08E02
Ensembl:ENSBTAT00000016154 GeneID:768225 KEGG:bta:768225 CTD:9572
HOGENOM:HOG000261691 InParanoid:Q08E02 KO:K03728 OMA:SCHQPNS
OrthoDB:EOG4DV5KZ NextBio:20918523 GO:GO:0010871 Uniprot:Q08E02
Length = 613
Score = 211 (79.3 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 448 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 504
Query: 255 HEAGVGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + K+ + + + ELG ++L + D G+++ VE L+E
Sbjct: 505 QELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQET 564
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 565 LLRALRALVLKNRPSETSRFTKLLLKLPDLRTL 597
Score = 187 (70.9 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 126 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 185
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E++S
Sbjct: 186 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQS 223
>MGI|MGI:2444210 [details] [associations]
symbol:Nr1d1 "nuclear receptor subfamily 1, group D, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:2444210 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 Reactome:REACT_109335
Reactome:REACT_24972 EMBL:AL590963 eggNOG:NOG324222 HSSP:P03372
GeneTree:ENSGT00700000104109 GO:GO:0034144 CTD:9572
HOGENOM:HOG000261691 KO:K03728 OMA:SCHQPNS OrthoDB:EOG4DV5KZ
GO:GO:0010871 HOVERGEN:HBG106790 EMBL:AK137398 EMBL:AK137582
EMBL:AK146430 EMBL:AK154931 EMBL:AK155597 EMBL:BC008989
EMBL:AF291821 EMBL:X86010 EMBL:AY336125 IPI:IPI00122690 PIR:S52813
RefSeq:NP_663409.2 UniGene:Mm.390397 ProteinModelPortal:Q3UV55
SMR:Q3UV55 DIP:DIP-59440N STRING:Q3UV55 PhosphoSite:Q3UV55
PRIDE:Q3UV55 Ensembl:ENSMUST00000064941 GeneID:217166
KEGG:mmu:217166 UCSC:uc007lhh.1 InParanoid:Q3UV55 NextBio:375617
Bgee:Q3UV55 CleanEx:MM_NR1D1 Genevestigator:Q3UV55 Uniprot:Q3UV55
Length = 615
Score = 211 (79.3 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 450 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 506
Query: 255 HEAGVGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + K+ + + + ELG ++L + D G+++ VE L+E
Sbjct: 507 QELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQET 566
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 567 LLRALRALVLKNRPSETSRFTKLLLKLPDLRTL 599
Score = 187 (70.9 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 126 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 185
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E++S
Sbjct: 186 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQS 223
>UNIPROTKB|Q6NXU0 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4, group A, member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0010035 "response to inorganic substance"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0017085
"response to insecticide" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021986 "habenula development" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0042053 "regulation
of dopamine metabolic process" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0033554
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944 GO:GO:0008344
GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265
GO:GO:0030522 GO:GO:0043576 GO:GO:0017085 GO:GO:0042551
GO:GO:0021986 HOGENOM:HOG000230925 HOVERGEN:HBG052663 EMBL:AC074099
UniGene:Hs.563344 HGNC:HGNC:7981 ChiTaRS:NR4A2 HSSP:P20393
EMBL:BC066890 EMBL:AK291456 IPI:IPI00927645 SMR:Q6NXU0
STRING:Q6NXU0 Ensembl:ENST00000426264 Uniprot:Q6NXU0
Length = 535
Score = 342 (125.4 bits), Expect = 9.0e-31, P = 9.0e-31
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 186 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 245
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 246 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 305
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 306 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 365
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 366 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 424
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 425 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 482
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 483 LNRPNYLSKLLGKLPELRTL 502
>MGI|MGI:1352456 [details] [associations]
symbol:Nr4a2 "nuclear receptor subfamily 4, group A, member
2" species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IMP] [GO:0006950
"response to stress" evidence=IMP] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0010035
"response to inorganic substance" evidence=ISO] [GO:0010467 "gene
expression" evidence=IMP] [GO:0016265 "death" evidence=IMP]
[GO:0017085 "response to insecticide" evidence=ISO] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0021953 "central nervous system neuron
differentiation" evidence=IMP] [GO:0021986 "habenula development"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] [GO:0031668 "cellular response to extracellular
stimulus" evidence=ISO;IDA] [GO:0033554 "cellular response to
stress" evidence=IMP] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IDA] [GO:0042416 "dopamine biosynthetic process"
evidence=IMP] [GO:0042417 "dopamine metabolic process"
evidence=IMP] [GO:0042551 "neuron maturation" evidence=IMP]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352456
GO:GO:0005634 GO:GO:0005737 GO:GO:0043085 GO:GO:0001764
GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0031668
GO:GO:0009791 GO:GO:0010035 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0043576 GO:GO:0017085
GO:GO:0042551 eggNOG:NOG245120 KO:K08558 GO:GO:0021986
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:4929 OMA:MWEDPGS
OrthoDB:EOG40CHGK ChiTaRS:NR4A2 EMBL:S53744 EMBL:U86783
IPI:IPI00112726 IPI:IPI00230431 PIR:A46225 RefSeq:NP_001132981.1
RefSeq:NP_038641.1 UniGene:Mm.3507 ProteinModelPortal:Q06219
SMR:Q06219 IntAct:Q06219 STRING:Q06219 PhosphoSite:Q06219
PRIDE:Q06219 Ensembl:ENSMUST00000028166 Ensembl:ENSMUST00000112629
GeneID:18227 KEGG:mmu:18227 UCSC:uc012bvn.1 InParanoid:Q06219
NextBio:293656 Bgee:Q06219 CleanEx:MM_NR4A2 Genevestigator:Q06219
GermOnline:ENSMUSG00000026826 Uniprot:Q06219
Length = 598
Score = 343 (125.8 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>RGD|3202 [details] [associations]
symbol:Nr4a2 "nuclear receptor subfamily 4, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0003677
"DNA binding" evidence=ISO;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA;TAS] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006950 "response to
stress" evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA;ISO] [GO:0009791
"post-embryonic development" evidence=IEA;ISO] [GO:0010035 "response
to inorganic substance" evidence=IDA] [GO:0010467 "gene expression"
evidence=ISO] [GO:0016265 "death" evidence=IEA;ISO] [GO:0017085
"response to insecticide" evidence=IDA] [GO:0021952 "central nervous
system projection neuron axonogenesis" evidence=IEA;ISO] [GO:0021953
"central nervous system neuron differentiation" evidence=ISO]
[GO:0021986 "habenula development" evidence=IEA;ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=TAS] [GO:0031668
"cellular response to extracellular stimulus" evidence=IEA;ISO]
[GO:0033554 "cellular response to stress" evidence=IEA;ISO]
[GO:0042053 "regulation of dopamine metabolic process"
evidence=IEA;ISO] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA;ISO] [GO:0042417 "dopamine metabolic process"
evidence=ISO] [GO:0042551 "neuron maturation" evidence=IEA;ISO]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA;ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO;IDA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISO;ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284
PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3202 GO:GO:0005634 GO:GO:0005737 GO:GO:0043085
GO:GO:0001764 GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0043576
GO:GO:0017085 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 CTD:4929 OrthoDB:EOG40CHGK EMBL:U01146 EMBL:L08595
EMBL:U72345 IPI:IPI00325635 PIR:I84692 RefSeq:NP_062201.2
UniGene:Rn.88129 ProteinModelPortal:Q07917 SMR:Q07917 STRING:Q07917
PhosphoSite:Q07917 PRIDE:Q07917 Ensembl:ENSRNOT00000041394
GeneID:54278 KEGG:rno:54278 InParanoid:Q07917 NextBio:610844
ArrayExpress:Q07917 Genevestigator:Q07917
GermOnline:ENSRNOG00000005600 Uniprot:Q07917
Length = 598
Score = 343 (125.8 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQDPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>UNIPROTKB|G3V770 [details] [associations]
symbol:Nr1d1 "Nuclear receptor subfamily 1 group D member
1" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010871 "negative
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:628827 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:CH473948
GeneTree:ENSGT00700000104109 OMA:SCHQPNS UniGene:Rn.29848
Ensembl:ENSRNOT00000012537 Uniprot:G3V770
Length = 614
Score = 211 (79.3 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 52/153 (33%), Positives = 82/153 (53%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 449 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 505
Query: 255 HEAGVGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + K+ + + + ELG ++L + D G+++ VE L+E
Sbjct: 506 QELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQET 565
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 566 LLRALRALVLKNRPSETSRFTKLLLKLPDLRTL 598
Score = 184 (69.8 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 39/98 (39%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 125 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 184
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E+++
Sbjct: 185 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQN 222
>UNIPROTKB|P43354 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0010035 "response to
inorganic substance" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0017085 "response to insecticide" evidence=IEA]
[GO:0021952 "central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0021986 "habenula development" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0042053
"regulation of dopamine metabolic process" evidence=IEA]
[GO:0042416 "dopamine biosynthetic process" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043085 "positive
regulation of catalytic activity" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=ISS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0031668 "cellular response to extracellular stimulus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0005654
GO:GO:0033554 GO:GO:0046872 GO:GO:0071542 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0008344 GO:GO:0001975 GO:GO:0043524 GO:GO:0031668
GO:GO:0009791 GO:GO:0010035 GO:GO:0042416 EMBL:CH471058
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0006367
GO:GO:0043576 Orphanet:2828 GO:GO:0017085 GO:GO:0042551
eggNOG:NOG245120 KO:K08558 GO:GO:0021986 HOVERGEN:HBG052663
CTD:4929 OrthoDB:EOG40CHGK EMBL:X75918 EMBL:AB017586 EMBL:AB019433
EMBL:AC074099 EMBL:BC009288 EMBL:S77154 IPI:IPI01013823 PIR:A57040
RefSeq:NP_006177.1 UniGene:Hs.563344 PDB:1OVL PDBsum:1OVL
ProteinModelPortal:P43354 SMR:P43354 IntAct:P43354 STRING:P43354
PhosphoSite:P43354 DMDM:1171750 PRIDE:P43354 DNASU:4929
Ensembl:ENST00000339562 Ensembl:ENST00000409572 GeneID:4929
KEGG:hsa:4929 UCSC:uc002tyx.4 GeneCards:GC02M157180 HGNC:HGNC:7981
HPA:CAB010481 HPA:HPA000543 MIM:601828 neXtProt:NX_P43354
PharmGKB:PA31762 InParanoid:P43354 PhylomeDB:P43354
ChEMBL:CHEMBL5002 ChiTaRS:NR4A2 EvolutionaryTrace:P43354
GenomeRNAi:4929 NextBio:18989 ArrayExpress:P43354 Bgee:P43354
CleanEx:HS_NR4A2 Genevestigator:P43354 GermOnline:ENSG00000153234
Uniprot:P43354
Length = 598
Score = 342 (125.4 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>UNIPROTKB|F1RPU1 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0009791 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0030522 GO:GO:0043576
GO:GO:0042551 GeneTree:ENSGT00640000091364 GO:GO:0021986
OMA:MWEDPGS EMBL:CU463810 EMBL:HQ738304 Ensembl:ENSSSCT00000017282
Uniprot:F1RPU1
Length = 598
Score = 342 (125.4 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>UNIPROTKB|E2RBX8 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0009791 GO:GO:0042416 GO:GO:0021952
GO:GO:0042053 GO:GO:0016265 GO:GO:0030522 GO:GO:0043576
GO:GO:0042551 GeneTree:ENSGT00640000091364 GO:GO:0021986
OMA:MWEDPGS EMBL:AAEX03017669 Ensembl:ENSCAFT00000014654
NextBio:20854035 Uniprot:E2RBX8
Length = 609
Score = 342 (125.4 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 260 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 319
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 320 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 379
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 380 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 439
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 440 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 498
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 499 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 556
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 557 LNRPNYLSKLLGKLPELRTL 576
>UNIPROTKB|F5H4G9 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 OMA:MWEDPGS EMBL:AC074099 HGNC:HGNC:7981
ChiTaRS:NR4A2 IPI:IPI00018033 ProteinModelPortal:F5H4G9 SMR:F5H4G9
Ensembl:ENST00000539077 ArrayExpress:F5H4G9 Bgee:F5H4G9
Uniprot:F5H4G9
Length = 609
Score = 342 (125.4 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 92/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 260 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 319
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 320 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 379
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 380 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 439
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 440 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 498
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L+++ N+
Sbjct: 499 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLKDHVTFNNGG 556
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 557 LNRPNYLSKLLGKLPELRTL 576
>UNIPROTKB|Q13285 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001553 "luteinization" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0009888 "tissue development" evidence=IEA] [GO:0010259
"multicellular organismal aging" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0042445 "hormone metabolic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:2000195 "negative regulation of female
gonad development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0050810 "regulation of steroid biosynthetic
process" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0007267 "cell-cell
signaling" evidence=TAS] [GO:0007538 "primary sex determination"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005654 GO:GO:0030154 GO:GO:0030325
GO:GO:0050810 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH471090
GO:GO:0045944 GO:GO:0007267 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003713 GO:GO:0003690 GO:GO:0006367
GO:GO:0051457 Orphanet:243 Orphanet:619 GO:GO:0001553 Orphanet:242
GO:GO:2000020 GO:GO:0007538 Orphanet:168558 GO:GO:0009888
GO:GO:2000195 eggNOG:NOG240365 Orphanet:251510 EMBL:AL137846
PDB:1ZDT PDBsum:1ZDT InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 EMBL:AL354979
CleanEx:HS_SF1 CTD:2516 KO:K08560 OMA:PFGLMCK OrthoDB:EOG4FJ891
EMBL:U76388 EMBL:D88155 EMBL:BC032501 EMBL:U32592 IPI:IPI00012446
PIR:JC4972 RefSeq:NP_004950.2 UniGene:Hs.495108 PDB:1YOW
PDBsum:1YOW ProteinModelPortal:Q13285 SMR:Q13285 IntAct:Q13285
MINT:MINT-215481 STRING:Q13285 PhosphoSite:Q13285 DMDM:3121738
PRIDE:Q13285 DNASU:2516 Ensembl:ENST00000373588 GeneID:2516
KEGG:hsa:2516 UCSC:uc004boo.1 GeneCards:GC09M127243 HGNC:HGNC:7983
MIM:184757 MIM:612964 MIM:612965 MIM:613957 neXtProt:NX_Q13285
PharmGKB:PA31764 InParanoid:Q13285 PhylomeDB:Q13285
BindingDB:Q13285 ChEMBL:CHEMBL4666 EvolutionaryTrace:Q13285
GenomeRNAi:2516 NextBio:9909 ArrayExpress:Q13285 Bgee:Q13285
CleanEx:HS_NR5A1 Genevestigator:Q13285 GermOnline:ENSG00000136931
Uniprot:Q13285
Length = 461
Score = 201 (75.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 54/168 (32%), Positives = 95/168 (56%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISV-KDG-IL 242
+C+ D+ +VDWA+ F L + DQ+ LL+ W+ELL+ +R + K+G IL
Sbjct: 265 LCRMADQTFISIVDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSIL 324
Query: 243 LAPGVTVYRSS-AHEAGVGGIFDRVLT--ELVSKMREMKMDKTELGCLRTIILFNPDVRG 299
L G V ++ A +AG + VL ELV ++ +++D+ E CL+ IILF+ D++
Sbjct: 325 LVTGQEVELTTVATQAG-SLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKF 383
Query: 300 LKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSIEV 347
L + +V+ +EK +L +YT ++ +F +LLL L +R++ +
Sbjct: 384 LNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSM 431
Score = 193 (73.0 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXX 116
LC +CGD+ SG HYG+ +CE CKGFFKRTV+ + Y C E ++C ID
Sbjct: 12 LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPFCRFQ 71
Query: 117 XXLNMGMKREAVQEERQR 134
L +GM+ EAV+ +R R
Sbjct: 72 KCLTVGMRLEAVRADRMR 89
>UNIPROTKB|P20393 [details] [associations]
symbol:NR1D1 "Nuclear receptor subfamily 1 group D member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0003714 "transcription
corepressor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0010871 "negative regulation of receptor
biosynthetic process" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=IMP] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IDA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0003714 GO:GO:0005654 GO:GO:0046872 GO:GO:0007623
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071222
GO:GO:0000122 GO:GO:0044212 GO:GO:0000790 GO:GO:0006367
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
eggNOG:NOG324222 GO:GO:0034144 PDB:3N00 PDBsum:3N00 CTD:9572
HOGENOM:HOG000261691 KO:K03728 OMA:SCHQPNS OrthoDB:EOG4DV5KZ
GO:GO:0010871 EMBL:M24898 EMBL:M24900 EMBL:X55066 EMBL:X55067
EMBL:X72631 EMBL:BC047875 EMBL:BC056148 EMBL:M34339 EMBL:M34340
IPI:IPI00023603 PIR:A32286 RefSeq:NP_068370.1 UniGene:Hs.592130
UniGene:Hs.724 PDB:1A6Y PDB:1EF6 PDB:1GA5 PDB:1HLZ PDBsum:1A6Y
PDBsum:1EF6 PDBsum:1GA5 PDBsum:1HLZ ProteinModelPortal:P20393
SMR:P20393 DIP:DIP-48396N IntAct:P20393 STRING:P20393
PhosphoSite:P20393 DMDM:119100 PRIDE:P20393 DNASU:9572
Ensembl:ENST00000246672 GeneID:9572 KEGG:hsa:9572 UCSC:uc002htz.2
GeneCards:GC17M038249 HGNC:HGNC:7962 HPA:HPA007935 MIM:602408
neXtProt:NX_P20393 PharmGKB:PA31748 HOVERGEN:HBG106790
InParanoid:P20393 BindingDB:P20393 ChEMBL:CHEMBL1961783
ChiTaRS:NR1D1 EvolutionaryTrace:P20393 GenomeRNAi:9572
NextBio:35899 ArrayExpress:P20393 Bgee:P20393 CleanEx:HS_NR1D1
Genevestigator:P20393 GermOnline:ENSG00000126368 Uniprot:P20393
Length = 614
Score = 207 (77.9 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 52/153 (33%), Positives = 83/153 (54%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 449 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 505
Query: 255 HEAGVGGIFDRV--LTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + + K+ + + + ELG ++L + D G+++ VE L+E
Sbjct: 506 QELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQET 565
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 566 LLRALRALVLKNRPLETSRFTKLLLKLPDLRTL 598
Score = 187 (70.9 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 125 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 184
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E++S
Sbjct: 185 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQS 222
>ZFIN|ZDB-GENE-990415-184 [details] [associations]
symbol:nr4a2a "nuclear receptor subfamily 4, group
A, member 2a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0021953 "central nervous system
neuron differentiation" evidence=IGI] [GO:0021884 "forebrain neuron
development" evidence=IMP] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-990415-184 GO:GO:0005634 GO:GO:0046872 GO:GO:0071542
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0021884 GeneTree:ENSGT00640000091364 EMBL:CU179638
IPI:IPI00932496 ProteinModelPortal:F1RER4
Ensembl:ENSDART00000109954 Bgee:F1RER4 Uniprot:F1RER4
Length = 635
Score = 339 (124.4 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 91/320 (28%), Positives = 153/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 286 PSPPSRGSPSTEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 345
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S + P ++ A
Sbjct: 346 KRRRNRCQYCRFQKCLVVGMVKEVVRTDNLKGRRGRLPSKPKSPQESSPPSPPVSLISAL 405
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + P+ D Q + + D +Q + L+ WA+ IP FT
Sbjct: 406 VRAHVDSNPSMNSLDYTRFQANPDYQLSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFT 465
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS ++ ++ GV ++R G G D ++
Sbjct: 466 DLPKPDQDLLFESAFLELFVLRLAYRSNPMESKLIFCNGVVLHRLQCVR-GFGEWIDSIV 524
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + GLK + VE L+ K+ L++ N
Sbjct: 525 -EFSSNLQNMNLDISAFSCIAALAMVT-ERHGLKEPKRVEDLQNKIVNCLKDQVTFNGGG 582
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 583 LNRPNYLSKLLGKLPELRTL 602
>ZFIN|ZDB-GENE-050105-1 [details] [associations]
symbol:nr1d1 "nuclear receptor subfamily 1, group d,
member 1" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004887
"thyroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-050105-1
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0004887 CTD:9572 HOGENOM:HOG000261691
KO:K03728 HOVERGEN:HBG106790 HSSP:P20393 EMBL:AY391444
IPI:IPI00998148 RefSeq:NP_991292.1 UniGene:Dr.85991
ProteinModelPortal:Q6TNS3 SMR:Q6TNS3 STRING:Q6TNS3 GeneID:494487
KEGG:dre:494487 NextBio:20865711 Bgee:Q6TNS3 Uniprot:Q6TNS3
Length = 637
Score = 209 (78.6 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 49/152 (32%), Positives = 83/152 (54%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDG-ILLAPGVTVYRSS 253
++V++AKHIP F+TL DQV LL+AG E+L+ FS +VK+ + G T +
Sbjct: 473 EVVEFAKHIPGFSTLSQNDQVTLLKAGTFEVLMVRFSSL-FNVKEKTVTFISGATYSLEA 531
Query: 254 AHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKV 313
G+G + + + K+ +++ ELG ++L + D G+++ VEML+E +
Sbjct: 532 LKSMGMGDLLGTMF-DFSEKLNSLELSAEELGLFTAVVLVSADRSGIENVNSVEMLQESL 590
Query: 314 YTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+L + + RF KLLL+LP LR++
Sbjct: 591 IRALRTLVSKSAPTDASRFTKLLLKLPDLRTL 622
Score = 183 (69.5 bits), Expect = 4.9e-30, Sum P(2) = 4.9e-30
Identities = 38/104 (36%), Positives = 60/104 (57%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + C I
Sbjct: 121 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCTIMRINRNR 180
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVESTSGTLI 151
L++GM R+AV+ R +R K+R E+++ ++
Sbjct: 181 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQNAMNNMV 224
>RGD|628827 [details] [associations]
symbol:Nr1d1 "nuclear receptor subfamily 1, group D, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007623 "circadian
rhythm" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010871 "negative regulation of receptor biosynthetic process"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
[GO:2000189 "positive regulation of cholesterol homeostasis"
evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:628827 GO:GO:0046872 GO:GO:0007623 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0071222 GO:GO:0000122
GO:GO:0044212 GO:GO:0000790 eggNOG:NOG324222 GO:GO:0034144 CTD:9572
HOGENOM:HOG000261691 KO:K03728 OrthoDB:EOG4DV5KZ GO:GO:0010871
HOVERGEN:HBG106790 EMBL:BC062047 EMBL:M25804 IPI:IPI00421519
PIR:A30226 RefSeq:NP_001106893.1 RefSeq:NP_665718.2
UniGene:Rn.29848 ProteinModelPortal:Q63503 SMR:Q63503 STRING:Q63503
GeneID:252917 KEGG:rno:252917 UCSC:RGD:628827 InParanoid:Q63503
NextBio:624049 Genevestigator:Q63503 GermOnline:ENSRNOG00000009329
Uniprot:Q63503
Length = 615
Score = 207 (77.9 bits), Expect = 7.3e-30, Sum P(2) = 7.3e-30
Identities = 51/153 (33%), Positives = 82/153 (53%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AKHIP F L DQV LL+AG E+L+ F+ +VKD ++ T Y S
Sbjct: 450 EVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASL-FNVKDQTVMFLSRTTY--SL 506
Query: 255 HEAGVGGIFD--RVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
E G G+ D + + K+ + + + ELG ++L + D G+++ VE L++
Sbjct: 507 QELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQKT 566
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +L N E RF KLLL+LP LR++
Sbjct: 567 LLRALRALVLKNRPSETSRFTKLLLKLPDLRTL 599
Score = 184 (69.8 bits), Expect = 7.3e-30, Sum P(2) = 7.3e-30
Identities = 39/98 (39%), Positives = 59/98 (60%)
Query: 51 LCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXX 109
L G LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 126 LNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNR 185
Query: 110 XXXXXXXXXLNMGMKREAVQEER--QRTKERDSNEVES 145
L++GM R+AV+ R +R K+R E+++
Sbjct: 186 CQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQN 223
>UNIPROTKB|E9PSV7 [details] [associations]
symbol:Nr6a1 "Protein Nr6a1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1564740 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0007276 GeneTree:ENSGT00670000097927
IPI:IPI00464878 Ensembl:ENSRNOT00000018751 Uniprot:E9PSV7
Length = 438
Score = 199 (75.1 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 245 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 300
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 301 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 359
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 360 IRGLSSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 408
Score = 188 (71.2 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 18 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 77
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 78 CLQMGMNRKAIRED 91
>UNIPROTKB|F1MXG9 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 EMBL:DAAA02032107 IPI:IPI00711176
Ensembl:ENSBTAT00000052227 Uniprot:F1MXG9
Length = 425
Score = 198 (74.8 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 232 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 287
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 288 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 346
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 347 IRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 395
Score = 188 (71.2 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 5 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 64
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 65 CLQMGMNRKAIRED 78
>ZFIN|ZDB-GENE-991207-19 [details] [associations]
symbol:nr6a1a "nuclear receptor subfamily 6, group
A, member 1a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048513 "organ development"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISS] [GO:0016477
"cell migration" evidence=ISS] [GO:0022008 "neurogenesis"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-991207-19 GO:GO:0005634
GO:GO:0005737 GO:GO:0042803 GO:GO:0016477 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0030917 EMBL:AJ007703 IPI:IPI00507829
RefSeq:NP_571331.2 UniGene:Dr.8104 HSSP:P03372
ProteinModelPortal:Q9PU65 SMR:Q9PU65 STRING:Q9PU65 GeneID:30506
KEGG:dre:30506 CTD:30506 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP NextBio:20806895
ArrayExpress:Q9PU65 Uniprot:Q9PU65
Length = 477
Score = 204 (76.9 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNEL-LIASFSHRSISVKDGIL- 242
+C+ D+ LF+ + W K +P F L +ED LL A W EL L+A + S V +
Sbjct: 268 LCRLADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILLACLTVYSAQVLGDLAN 327
Query: 243 LAPGVTVYRSSAHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL 300
+ T H G + ++++ L K ++K+ E C++ I N D+RGL
Sbjct: 328 VTHKYTPSDDELHSFSEDGMEVMEKLIY-LFRKFHQLKVSNEEYACMKAINFLNQDIRGL 386
Query: 301 KSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +E L ++ + ++YT + +P RF ++++ LP +R I
Sbjct: 387 TNVTQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCI 431
Score = 182 (69.1 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC +
Sbjct: 43 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLK 102
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 103 CLQMGMNRKAIRED 116
>UNIPROTKB|Q5R5Y4 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=ISS]
[GO:0071542 "dopaminergic neuron differentiation" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006351 GO:GO:0030522 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:CR860717 UniGene:Pab.19568 HSSP:P43354
ProteinModelPortal:Q5R5Y4 SMR:Q5R5Y4 InParanoid:Q5R5Y4
Uniprot:Q5R5Y4
Length = 598
Score = 334 (122.6 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 91/320 (28%), Positives = 152/320 (47%)
Query: 44 PYPPNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIID 103
P PP+ ++ LC++CGD A+ +HYGV +CEGCKGFFKRTV+K+ Y C +NC +D
Sbjct: 249 PSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVD 308
Query: 104 XXXXXXXXXXXXXXXLNMGMKREAVQEERQRTKE-RDSNEVESTSGTLIEMPVERILEAE 162
L +GM +E V+ + + + R ++ +S P ++ A
Sbjct: 309 KRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISAL 368
Query: 163 QRVDMKQEPA--DQDIVNEQQATNICKATD-----KQLFQLVD--------WAKHIPHFT 207
R + PA D Q + + D +Q + L+ WA+ IP F
Sbjct: 369 VRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFA 428
Query: 208 TLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVL 267
LP DQ LL + + EL + ++RS V+ ++ GV ++R G G D ++
Sbjct: 429 DLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVR-GFGEWIDSIV 487
Query: 268 TELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHS- 326
E S ++ M +D + C+ + + + LK + VE L+ K+ L+++ N+
Sbjct: 488 -EFSSNLQNMNIDISAFSCIAALAMVT-ERHWLKEPKRVEELQNKIVNCLKDHVTFNNGG 545
Query: 327 -EEPGRFAKLLLRLPSLRSI 345
P +KLL +LP LR++
Sbjct: 546 LNRPNYLSKLLGKLPELRTL 565
>UNIPROTKB|F1PHV1 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:AAEX03006888
EMBL:AAEX03006889 Ensembl:ENSCAFT00000032203 Uniprot:F1PHV1
Length = 437
Score = 198 (74.8 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 244 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 299
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 300 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 358
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 359 IRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 407
Score = 188 (71.2 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 18 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 77
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 78 CLQMGMNRKAIRED 91
>MGI|MGI:1352462 [details] [associations]
symbol:Nr1h3 "nuclear receptor subfamily 1, group H, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006633 "fatty acid
biosynthetic process" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO;IDA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=ISO;IGI] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0032369 "negative regulation of lipid transport" evidence=ISO]
[GO:0032376 "positive regulation of cholesterol transport"
evidence=ISO] [GO:0032570 "response to progesterone stimulus"
evidence=ISO] [GO:0032810 "sterol response element binding"
evidence=ISO] [GO:0034145 "positive regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0042632
"cholesterol homeostasis" evidence=IGI] [GO:0043031 "negative
regulation of macrophage activation" evidence=IDA] [GO:0043277
"apoptotic cell clearance" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA]
[GO:0044255 "cellular lipid metabolic process" evidence=IDA]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=ISO] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048550 "negative regulation of pinocytosis"
evidence=ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IDA] [GO:0051006 "positive regulation of
lipoprotein lipase activity" evidence=ISO] [GO:0055088 "lipid
homeostasis" evidence=IGI;IMP] [GO:0055092 "sterol homeostasis"
evidence=IMP] [GO:0070328 "triglyceride homeostasis"
evidence=IGI;IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO;IDA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IMP] [GO:0090341
"negative regulation of secretion of lysosomal enzymes"
evidence=IMP] [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:1352462 GO:GO:0005634 GO:GO:0005737 GO:GO:0008286
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0045861
GO:GO:0006633 GO:GO:0071222 GO:GO:0042632 GO:GO:0010887
GO:GO:0010875 GO:GO:0000122 GO:GO:0051006 GO:GO:0000790
GO:GO:2000189 GO:GO:0070328 GO:GO:0010867 GO:GO:0032570
GO:GO:0032270 GO:GO:0045723 GO:GO:0043031 GO:GO:0043277
eggNOG:NOG285805 GeneTree:ENSGT00680000099585 GO:GO:0010870
GO:GO:0032369 GO:GO:0034145 EMBL:AL691450 GO:GO:0048550
HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 CTD:10062 KO:K08536 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:AJ132599
EMBL:AJ132600 EMBL:AJ132601 EMBL:AF085745 IPI:IPI00129650
RefSeq:NP_001171201.1 RefSeq:NP_038867.2 UniGene:Mm.22690 PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
ProteinModelPortal:Q9Z0Y9 SMR:Q9Z0Y9 IntAct:Q9Z0Y9 STRING:Q9Z0Y9
PhosphoSite:Q9Z0Y9 PRIDE:Q9Z0Y9 Ensembl:ENSMUST00000002177
Ensembl:ENSMUST00000111354 Ensembl:ENSMUST00000111356 GeneID:22259
KEGG:mmu:22259 InParanoid:Q9Z0Y9 EvolutionaryTrace:Q9Z0Y9
NextBio:302349 Bgee:Q9Z0Y9 CleanEx:MM_NR1H3 Genevestigator:Q9Z0Y9
GermOnline:ENSMUSG00000002108 Uniprot:Q9Z0Y9
Length = 445
Score = 204 (76.9 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 50/154 (32%), Positives = 72/154 (46%)
Query: 47 PNHPLCGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXX 106
P + G++ LCS+CGD+ASG HY V SCEGCKGFF+R+V K Y C G +C +D
Sbjct: 86 PAPKMLGNE-LCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGARYVCHSGGHCPMDTYM 144
Query: 107 XXXXXXXXXXXXLNMGMKREAVQEERQ-RTKERDSNEVESTSGTLIEMPVERILEAEQRV 165
GM+ E V E Q R K+ E E T + V + ++
Sbjct: 145 RRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAQATSVSPRVSSPPQVLPQL 204
Query: 166 DMKQEPADQDIVNEQQATNICKATDKQLFQLVDW 199
+Q + +V QQ N +D+ ++ W
Sbjct: 205 SPEQLGMIEKLVAAQQQCNRRSFSDR--LRVTPW 236
Score = 180 (68.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 45/176 (25%), Positives = 85/176 (48%)
Query: 170 EPADQDIVNEQQATNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIAS 229
+P ++ +Q+ + + + ++VD+AK +P F L EDQ+ LL+ E+++
Sbjct: 241 DPQSRE-ARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLE 299
Query: 230 FSHRSISVKDGILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRT 289
S R + I + R +AG+ F + E M E++++ E L
Sbjct: 300 TSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIA 359
Query: 290 IILFNPDVRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
I +F+ D ++ Q VE L+ +L Y +NH +P F ++L++L SLR++
Sbjct: 360 ISIFSADRPNVQDQLQVERLQHTYVEALHAYVSINHPHDPLMFPRMLMKLVSLRTL 415
>UNIPROTKB|G3N294 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0007276 "gamete generation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0007276
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:DAAA02032107
Ensembl:ENSBTAT00000065207 Uniprot:G3N294
Length = 448
Score = 198 (74.8 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 239 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 294
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 295 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 353
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 354 IRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 402
Score = 188 (71.2 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 12 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 71
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 72 CLQMGMNRKAIRED 85
>FB|FBgn0001078 [details] [associations]
symbol:ftz-f1 "ftz transcription factor 1" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0003677 "DNA binding" evidence=NAS;IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0007365 "periodic partitioning" evidence=IMP] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0035071 "salivary gland
cell autophagic cell death" evidence=NAS] [GO:0035075 "response to
ecdysone" evidence=TAS] [GO:0009725 "response to hormone stimulus"
evidence=TAS] [GO:0008219 "cell death" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0007552 "metamorphosis" evidence=IMP;TAS] [GO:0003712
"transcription cofactor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0002165 "instar larval or
pupal development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0042048 "olfactory behavior"
evidence=IMP] [GO:0035074 "pupation" evidence=IMP] [GO:0007480
"imaginal disc-derived leg morphogenesis" evidence=IMP] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0035626 "juvenile hormone mediated signaling
pathway" evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 EMBL:AE014296
GO:GO:0046872 GO:GO:0008219 GO:GO:0004879 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001077 GO:GO:0042048 GO:GO:0040034 GO:GO:0000976
GO:GO:0007480 GO:GO:0035074 GO:GO:0035626 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 KO:K08705 EMBL:M63711 EMBL:M98397
EMBL:BT058016 EMBL:AY051845 PIR:A47303 PIR:T13733
RefSeq:NP_001246824.1 RefSeq:NP_524143.2 RefSeq:NP_730359.1
UniGene:Dm.995 PDB:2XHS PDBsum:2XHS ProteinModelPortal:P33244
SMR:P33244 IntAct:P33244 MINT:MINT-156933 STRING:P33244
PaxDb:P33244 EnsemblMetazoa:FBtr0075086 GeneID:40045
KEGG:dme:Dmel_CG4059 CTD:40045 FlyBase:FBgn0001078
InParanoid:P33244 OMA:SKHCAGS OrthoDB:EOG4QZ61Z PhylomeDB:P33244
GenomeRNAi:40045 NextBio:816714 Bgee:P33244 GermOnline:CG4059
GO:GO:0007365 GO:GO:0035075 Uniprot:P33244
Length = 1027
Score = 206 (77.6 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 49/165 (29%), Positives = 85/165 (51%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSI--SVKDGIL 242
+CK D+ LF VDWA++ F L ++DQ+ LL+ W+++L+ H I + D
Sbjct: 833 MCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQ 892
Query: 243 LAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKS 302
L G S GV + D EL +K++++K D + C++ +IL NP VRG+ +
Sbjct: 893 LNNGQVFNLMSLGLLGVPQLGD-YFNELQNKLQDLKFDMGDYVCMKFLILLNPSVRGIVN 951
Query: 303 QQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSIEV 347
++ V + V +L +YT + +F L+ LP + ++ V
Sbjct: 952 RKTVSEGHDNVQAALLDYTLTCYPSVNDKFRGLVNILPEIHAMAV 996
Score = 188 (71.2 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 55 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXX 114
+ LC +CGD+ SG HYG+ +CE CKGFFKRTV+ Y C R+C ID
Sbjct: 505 EELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCR 564
Query: 115 XXXXLNMGMKREAVQEERQR 134
L +GMK EAV+ +R R
Sbjct: 565 FQKCLEVGMKLEAVRADRMR 584
Score = 42 (19.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 252 SSAHEAGVGGI 262
SS HEAG+G +
Sbjct: 754 SSCHEAGIGSL 764
>UNIPROTKB|A0P8Z4 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0007275 GO:GO:0005634 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 EMBL:AP009124 CTD:2649 EMBL:AB248749
RefSeq:NP_001090968.1 UniGene:Ssc.51714 ProteinModelPortal:A0P8Z4
SMR:A0P8Z4 STRING:A0P8Z4 GeneID:100038028 KEGG:ssc:100038028
Uniprot:A0P8Z4
Length = 479
Score = 198 (74.8 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 286 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 341
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 342 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 400
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 401 IRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 449
Score = 188 (71.2 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 119
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 120 CLQMGMNRKAIRED 133
>UNIPROTKB|Q15406 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0007276 "gamete generation" evidence=ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0007283 "spermatogenesis" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0042803 GO:GO:0046872
GO:GO:0008283 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0007283 GO:GO:0005667 GO:GO:0000122 GO:GO:0006367
EMBL:AL354928 eggNOG:NOG253308 HOVERGEN:HBG052664 KO:K08561
OrthoDB:EOG4SJ5DP EMBL:S83309 EMBL:U80802 EMBL:U64876 EMBL:AF004291
EMBL:X99975 EMBL:AL158075 EMBL:AL354979 EMBL:BC030600
IPI:IPI00017258 IPI:IPI00220041 IPI:IPI00413606 IPI:IPI00743885
IPI:IPI00848326 RefSeq:NP_001480.3 RefSeq:NP_201591.2
UniGene:Hs.586460 ProteinModelPortal:Q15406 SMR:Q15406
IntAct:Q15406 MINT:MINT-1404458 STRING:Q15406 PhosphoSite:Q15406
DMDM:12643728 PRIDE:Q15406 DNASU:2649 Ensembl:ENST00000344523
Ensembl:ENST00000373584 Ensembl:ENST00000416460
Ensembl:ENST00000487099 GeneID:2649 KEGG:hsa:2649 UCSC:uc004boq.1
UCSC:uc004bor.1 CTD:2649 GeneCards:GC09M127279 HGNC:HGNC:7985
MIM:602778 neXtProt:NX_Q15406 PharmGKB:PA31766 InParanoid:Q15406
OMA:HSCKTSV ChEMBL:CHEMBL1961793 ChiTaRS:NR6A1 GenomeRNAi:2649
NextBio:10454 ArrayExpress:Q15406 Bgee:Q15406 CleanEx:HS_NR6A1
Genevestigator:Q15406 GermOnline:ENSG00000148200 Uniprot:Q15406
Length = 480
Score = 198 (74.8 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 287 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 342
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 343 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 401
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 402 IRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 450
Score = 188 (71.2 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 119
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 120 CLQMGMNRKAIRED 133
>MGI|MGI:1352459 [details] [associations]
symbol:Nr6a1 "nuclear receptor subfamily 6, group A, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352459 GO:GO:0007275
GO:GO:0042803 GO:GO:0030154 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0007276
GeneTree:ENSGT00670000097927 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP CTD:2649 OMA:HSCKTSV
ChiTaRS:NR6A1 EMBL:U14666 EMBL:U09563 EMBL:AF254821 EMBL:AF254575
EMBL:AF254815 EMBL:AF254816 EMBL:AF254817 EMBL:AF254818
EMBL:AF254819 EMBL:AF254820 EMBL:AF390896 EMBL:AF390900
EMBL:AF390897 EMBL:AF390898 EMBL:AF390899 EMBL:AL844842
EMBL:AL935155 IPI:IPI00132245 IPI:IPI00752974 IPI:IPI00753585
PIR:A57053 RefSeq:NP_001153020.1 RefSeq:NP_034394.1
UniGene:Mm.439703 ProteinModelPortal:Q64249 SMR:Q64249
STRING:Q64249 PhosphoSite:Q64249 PRIDE:Q64249 DNASU:14536
Ensembl:ENSMUST00000076275 Ensembl:ENSMUST00000112877
Ensembl:ENSMUST00000142113 Ensembl:ENSMUST00000142130
Ensembl:ENSMUST00000168098 GeneID:14536 KEGG:mmu:14536
UCSC:uc012bus.1 UCSC:uc012buu.1 InParanoid:Q64249 NextBio:286194
Bgee:Q64249 CleanEx:MM_NR6A1 Genevestigator:Q64249
GermOnline:ENSMUSG00000063972 Uniprot:Q64249
Length = 495
Score = 198 (74.8 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGIL-- 242
+C+ D+ LF+ + W K +P F L ++D LL + W EL++ S S++V +
Sbjct: 302 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLS----SLTVYSKQIFG 357
Query: 243 -LAPGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPD 296
LA Y S H G + +R++ L K ++K+ E C++ I N D
Sbjct: 358 ELADVTAKYSPSDEELHRFSDEGMEVIERLIY-LYHKFHQLKVSNEEYACMKAINFLNQD 416
Query: 297 VRGLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+RGL S +E L ++ + +++T ++ +P RF L++ LP +R I
Sbjct: 417 IRGLTSASQLEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 465
Score = 188 (71.2 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 75 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 134
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 135 CLQMGMNRKAIRED 148
>UNIPROTKB|F1NVM8 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007276 "gamete
generation" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:AADN02026331
EMBL:AADN02026332 IPI:IPI00598740 Ensembl:ENSGALT00000001607
Uniprot:F1NVM8
Length = 435
Score = 196 (74.1 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 185 ICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNEL-LIASFSHRSISVKDGILL 243
+C+ D+ LF+ + W K +P F L ++D LL + W EL L++S + S + L
Sbjct: 242 LCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGD--L 299
Query: 244 APGVTVYRSS---AHEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVR 298
A + Y S H G + +R++ L K ++K+ E C++ I N D+R
Sbjct: 300 ADVTSKYSPSDDELHRFSEEGMEVMERLIY-LFRKFNQLKVSNEEYACMKAINFLNQDIR 358
Query: 299 GLKSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
GL + +E L ++ + +++T + +P RF L++ LP +R I
Sbjct: 359 GLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYI 405
Score = 188 (71.2 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 14 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 73
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 74 CLQMGMNRKAIRED 87
>UNIPROTKB|Q66JK1 [details] [associations]
symbol:nr6a1 "Nuclear receptor subfamily 6 group A member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0048513 "organ
development" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0016477
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0030917
GeneTree:ENSGT00670000097927 HSSP:P03372 eggNOG:NOG253308
HOGENOM:HOG000113847 HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP
CTD:2649 OMA:HSCKTSV EMBL:AL630347 EMBL:CR760283 EMBL:BC080883
RefSeq:NP_001008005.1 UniGene:Str.11424 ProteinModelPortal:Q66JK1
SMR:Q66JK1 STRING:Q66JK1 Ensembl:ENSXETT00000018759 GeneID:493367
KEGG:xtr:493367 Xenbase:XB-GENE-487592 InParanoid:Q66JK1
Bgee:Q66JK1 Uniprot:Q66JK1
Length = 435
Score = 195 (73.7 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 56/214 (26%), Positives = 100/214 (46%)
Query: 140 SNEVESTSGTLIEMPVERILEAEQRVDMKQEPADQD---IVNEQQATNICKATDKQLFQL 196
S ++ S TLI ++L AE + +D + + +C+ D+ LF+
Sbjct: 198 SRSLDPQSHTLIN----QLLTAEDIEPLSTPMLIEDGYKVTQSELFALLCRLADELLFRQ 253
Query: 197 VDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA-- 254
+ W K +P F L ++D LL W EL++ S S + S + LA + Y S
Sbjct: 254 ITWVKKLPFFCDLSIKDYTCLLSTTWQELILLS-SLTTYSKQIFGDLADVTSKYSPSEDE 312
Query: 255 -HEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLRE 311
H G + +R++ L K ++K+ E C++ I N D++G+ S VE L +
Sbjct: 313 LHRFSEDGMEVMERLIY-LFRKFSQLKVSNEEYVCMKAINFLNQDIQGISSVSQVEQLNK 371
Query: 312 KVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ + +++T + +P RF L++ LP +R I
Sbjct: 372 RYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYI 405
Score = 188 (71.2 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 14 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 73
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 74 CLQMGMNRKAIRED 87
>UNIPROTKB|P70033 [details] [associations]
symbol:nr6a1 "Nuclear receptor subfamily 6 group A member
1" species:8355 "Xenopus laevis" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0030917 "midbrain-hindbrain
boundary development" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0048513 "organ
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0016477
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0030917 HOVERGEN:HBG052664
KO:K08561 HSSP:P19793 CTD:2649 EMBL:U58683 EMBL:AY130967
RefSeq:NP_001084102.1 UniGene:Xl.37734 ProteinModelPortal:P70033
SMR:P70033 GeneID:399304 KEGG:xla:399304 Xenbase:XB-GENE-487596
Uniprot:P70033
Length = 435
Score = 194 (73.4 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 52/213 (24%), Positives = 98/213 (46%)
Query: 140 SNEVESTSGTLIEMPVERILEAEQRVDMKQEPADQD---IVNEQQATNICKATDKQLFQL 196
S ++ S TLI ++L AE + +D + + +C+ D+ LF+
Sbjct: 198 SRSLDPQSHTLIN----QLLTAEDIEPLNTPMLIEDGYKVTQSELFALLCRLADELLFRQ 253
Query: 197 VDWAKHIPHFTTLPLEDQVLLLRAGWNEL-LIASFSHRSISVKDGIL-LAPGVTVYRSSA 254
+ W K +P F L ++D LL W EL L++S + S + + + +
Sbjct: 254 ITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLTDVTSKYSPSEDEL 313
Query: 255 HEAGVGG--IFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREK 312
H G + +R++ L K ++K+ E C++ I N D++G+ S VE L ++
Sbjct: 314 HRFSEDGMEVMERLIY-LFRKFSQLKVSNEEYVCMKAINFLNQDIQGISSASQVEQLNKR 372
Query: 313 VYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+ +++T + +P RF L++ LP +R I
Sbjct: 373 YWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYI 405
Score = 188 (71.2 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 33/74 (44%), Positives = 44/74 (59%)
Query: 58 CSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREGRNCIIDXXXXXXXXXXXXXX 117
C ICGDRA+G HYG+ SCEGCKGFFKR++ Y C +NC++
Sbjct: 14 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLK 73
Query: 118 XLNMGMKREAVQEE 131
L MGM R+A++E+
Sbjct: 74 CLQMGMNRKAIRED 87
>ZFIN|ZDB-GENE-080403-5 [details] [associations]
symbol:nr1d4a "nuclear receptor subfamily 1, group D,
member 4a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-080403-5 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 HOGENOM:HOG000261691
HOVERGEN:HBG106790 EMBL:BX465853 IPI:IPI00512239 RefSeq:XP_691607.3
UniGene:Dr.103114 Ensembl:ENSDART00000103169 GeneID:563150
KEGG:dre:563150 CTD:563150 OrthoDB:EOG41NTM7 NextBio:20884758
Uniprot:B8A510
Length = 570
Score = 196 (74.1 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 40/99 (40%), Positives = 63/99 (63%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXXXXXXXX 115
LC +CGD ASG HYGV++CEGCKGFF+R+++++++Y C + NC+I
Sbjct: 113 LCKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRF 172
Query: 116 XXXLNMGMKREAVQEER--QRTKERDSNEVESTSGTLIE 152
L++GM R+AV+ R +R K+R +E++S +L E
Sbjct: 173 KKCLSVGMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNE 211
Score = 190 (71.9 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 58/225 (25%), Positives = 103/225 (45%)
Query: 125 REAVQEERQRTKERDSNEVESTSGTLIEMPVERILEAEQRV---DMKQEPADQDIVNEQQ 181
+ +V + Q T+ S+ S S + P + L A +V + P V+ QQ
Sbjct: 334 QSSVNQPSQPTQAHYSSYTASQSQSPASCPFK--LAAGSKVLACPLNACPVSAPGVSSQQ 391
Query: 182 A-TNICKATDKQLFQLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDG 240
+ + + ++V++AK IP F L DQV+LL+AG ++L+ F +
Sbjct: 392 VWESFSQCFTPAVREVVEFAKGIPGFQELCQHDQVMLLKAGTFQVLMVRFCSLFNHKERS 451
Query: 241 ILLAPGVTVYRSSAHEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGL 300
+ G T + G+G + D + E SK+ + ++ E+ ++L + D G+
Sbjct: 452 VTFLNGQTYPLGTLRGLGMGSLLDAMF-EFSSKLSSLGLESDEMALFMAVVLVSADCSGI 510
Query: 301 KSQQVVEMLREKVYTSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
VE L+E + +L H ++ F+KLLLRLP LR++
Sbjct: 511 SDMLAVEQLQEGLIRALRTLINRRHPDDNSLFSKLLLRLPDLRTL 555
>UNIPROTKB|I3LL46 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 OMA:MMNSQFS EMBL:FP085569
Ensembl:ENSSSCT00000025072 Uniprot:I3LL46
Length = 573
Score = 198 (74.8 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 42/119 (35%), Positives = 69/119 (57%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXXXXXXXX 115
LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 97 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRF 156
Query: 116 XXXLNMGMKREAVQEER--QRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPA 172
L++GM R+AV+ R +R K+R E++S T++ L+++ V+ ++ A
Sbjct: 157 KKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSGHLQSDALVEHHEQTA 215
Score = 187 (70.9 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AK IP F L DQV LL+AG E+L+ F+ + + + G
Sbjct: 409 EVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDL 468
Query: 255 HEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVY 314
H G G + + + E K+ +++ E+ ++L + D G+++ VE L+E +
Sbjct: 469 HSMGAGDLLNSMF-EFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLI 527
Query: 315 TSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+L NH E F KLLL+LP LRS+
Sbjct: 528 RALRTLIMKNHPNEASIFTKLLLKLPDLRSL 558
Score = 52 (23.4 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 253 SAHEAGVGGIFD-RVLTE-LVSKMRE--MKMDKTELGCLRTIILFNPDVRGLKSQQVVEM 308
SA +G+ + L E L+ +R MK E ++L PD+R L + E+
Sbjct: 507 SADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSEEL 566
Query: 309 LREKVY 314
L KV+
Sbjct: 567 LAFKVH 572
>UNIPROTKB|F1NFX1 [details] [associations]
symbol:NR1D2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00700000104109 EMBL:AADN02001116 EMBL:AADN02001117
EMBL:AADN02001118 IPI:IPI00584067 Ensembl:ENSGALT00000031164
Uniprot:F1NFX1
Length = 548
Score = 197 (74.4 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 42/123 (34%), Positives = 68/123 (55%)
Query: 57 LCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYA-CREGRNCIIDXXXXXXXXXXXX 115
LC +CGD ASG HYGV++CEGCKGFF+R++++++ Y C + NC I
Sbjct: 76 LCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNNNCSIMRMNRNRCQQCRF 135
Query: 116 XXXLNMGMKREAVQEER--QRTKERDSNEVESTSGTLIEMPVERILEAEQRVDMKQEPAD 173
L++GM R+AV+ R +R K+R E++S T++ L E + + +
Sbjct: 136 KKCLSVGMSRDAVRFGRIPKREKQRMLIEMQSAMKTMMNSQFSSHLPNEALAEHQDQAPQ 195
Query: 174 QDI 176
+D+
Sbjct: 196 EDL 198
Score = 186 (70.5 bits), Expect = 8.1e-29, Sum P(2) = 8.1e-29
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 195 QLVDWAKHIPHFTTLPLEDQVLLLRAGWNELLIASFSHRSISVKDGILLAPGVTVYRSSA 254
++V++AK IP F L DQV LL+AG E+L+ F+ + + + G
Sbjct: 384 EVVEFAKRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDARERTVTFLSGKKYSVDDL 443
Query: 255 HEAGVGGIFDRVLTELVSKMREMKMDKTELGCLRTIILFNPDVRGLKSQQVVEMLREKVY 314
H G G + + + E K+ +++ E+ ++L + D G+++ VE L+E +
Sbjct: 444 HSMGAGDLLNSMF-EFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLI 502
Query: 315 TSLEEYTRVNHSEEPGRFAKLLLRLPSLRSI 345
+L NH E F KLLL+LP LRS+
Sbjct: 503 RALRTLIMKNHPNEASIFTKLLLKLPDLRSL 533
Score = 52 (23.4 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 253 SAHEAGVGGIFD-RVLTE-LVSKMRE--MKMDKTELGCLRTIILFNPDVRGLKSQQVVEM 308
SA +G+ + L E L+ +R MK E ++L PD+R L + E+
Sbjct: 482 SADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIFTKLLLKLPDLRSLNNMHSEEL 541
Query: 309 LREKVY 314
L KV+
Sbjct: 542 LAFKVH 547
WARNING: HSPs involving 615 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 306 0.00099 115 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 865
No. of states in DFA: 611 (65 KB)
Total size of DFA: 214 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.57u 0.09s 27.66t Elapsed: 00:00:08
Total cpu time: 27.64u 0.09s 27.73t Elapsed: 00:00:08
Start: Thu Aug 15 16:47:21 2013 End: Thu Aug 15 16:47:29 2013
WARNINGS ISSUED: 2