BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3095
(106 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3TTY0|PLB1_MOUSE Phospholipase B1, membrane-associated OS=Mus musculus GN=Plb1 PE=2
SV=2
Length = 1478
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
P V+ LRP DI I+GA+GDS+TAGNG A+ N V TE RGLSWSVG
Sbjct: 384 PTTVHSLRPADIKIIGALGDSLTAGNGAGASPWNILDVLTEYRGLSWSVG 433
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 19 QARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
+A S PP +V+ LRP DI +V A+GDS+TAGNGI + N + V+T+ RGLS+S G
Sbjct: 724 RAPSASPPTSVHTLRPADIQVVAALGDSLTAGNGISSQEGNLTDVSTQYRGLSYSAG 780
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
P +V++LRP DI +V A+GD +T G + ++ T RGLSWS+G
Sbjct: 1087 PTSVHELRPADIKVVAAMGDFLTTATGARPSGYKRLATPWRGLSWSIG 1134
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 12 PFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGD---SITAGNGIVATNPSQ 60
PFPC + + +V+ LRP DI +V AIG+ + G+G + Q
Sbjct: 49 PFPCKPKKLELSVLSESVHSLRPSDIKLVAAIGNPEIPLAPGSGTINMEKPQ 100
>sp|Q06HQ7|PLB1_MONDO Phospholipase B1, membrane-associated OS=Monodelphis domestica
GN=PLB1 PE=2 SV=1
Length = 1474
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVGKN 75
P +V+ LRP DI ++GA+GDS+TAGNG +T N V T+ RGLSWS+G N
Sbjct: 383 PTSVHHLRPADIKVIGALGDSLTAGNGAGSTPGNILDVLTQYRGLSWSIGGN 434
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 19 QARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
Q S P++V+QLRP DI +V A+GDS+T G A N S +T RGLSWS+G
Sbjct: 1091 QGSSNSAPSSVHQLRPADIKVVAALGDSLTTAVGAGAKNNSNWSTAWRGLSWSIG 1145
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 6 QPHYEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPS---QVN 62
+P Y C+ +A S P +V+ L+P DI +V A+GDS+TAGNGI + P V
Sbjct: 724 KPDYGSQLWCE-DRAPSASFPTSVHALKPADIQVVAAVGDSLTAGNGI-GSKPDDLPDVI 781
Query: 63 TENRGLSWSVG 73
T+ RGLS+S G
Sbjct: 782 TQYRGLSYSAG 792
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 12 PFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGD 45
PFPC + P +V+ LR DI +VGAIG+
Sbjct: 42 PFPCRPEEIPFSPPSESVHSLRISDIRVVGAIGN 75
>sp|O54728|PLB1_RAT Phospholipase B1, membrane-associated OS=Rattus norvegicus GN=Plb1
PE=1 SV=1
Length = 1450
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 19 QARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
+A S PP +V+ LRP DI +V A+GDS+TAGNGI + + + V T+ RGLS+S G
Sbjct: 724 KAPSASPPTSVHTLRPADIQVVAALGDSVTAGNGISSQEGDLADVTTQYRGLSYSAG 780
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
P V++LRP DI ++GA+GDS+TAGNG ++ N V T+ RGLSWSVG
Sbjct: 384 PTTVHRLRPADIKVIGAMGDSLTAGNGAGSSPGNVLDVLTQYRGLSWSVG 433
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 19 QARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
Q+ S P +V++LRP DI +V A+GD +T G + S ++T RGLSWS+G
Sbjct: 1080 QSPSSKVPTSVHELRPSDIKVVAAMGDFLTTATGARPSESSSLDTPWRGLSWSIG 1134
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 13 FPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSIT---AGNGIVATNPSQ 60
FPC + + +V+ LRP DI +V AIG+ T G+G+V Q
Sbjct: 48 FPCKPKKLELSVLSKSVHSLRPSDIKLVAAIGNLETPPAPGSGVVNMEKPQ 98
>sp|Q6P1J6|PLB1_HUMAN Phospholipase B1, membrane-associated OS=Homo sapiens GN=PLB1 PE=1
SV=3
Length = 1458
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
P +V++L+P DI+++GA+GDS+TAGNG +T N V T+ RGLSWSVG
Sbjct: 380 PTSVHRLKPADINVIGALGDSLTAGNGAGSTPGNVLDVLTQYRGLSWSVG 429
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 5/64 (7%)
Query: 13 FPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPS---QVNTENRGLS 69
PC +A S L P +V+ LRP DI +V A+GDS+TAGNGI + P V T+ RGLS
Sbjct: 715 LPCR-DRAPSALHPTSVHALRPADIQVVAALGDSLTAGNGI-GSKPDDLPDVTTQYRGLS 772
Query: 70 WSVG 73
+S G
Sbjct: 773 YSAG 776
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
P +V+QLRP DI +V A+GDS+T G N S + T RGLSWS+G
Sbjct: 1083 PTSVHQLRPADIKVVAALGDSLTTAVGARPNNSSDLPTSWRGLSWSIG 1130
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 11 GPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGD 45
PFPC+ ++ +P +V+ L+P DI V AIG+
Sbjct: 44 SPFPCNPNKLGVNMPSKSVHSLKPSDIKFVAAIGN 78
>sp|O70320|PLB1_CAVPO Phospholipase B1, membrane-associated OS=Cavia porcellus GN=PLB1
PE=1 SV=1
Length = 1463
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVGKN 75
P +V++L+P DI ++GA+GDS+TAGNG + N V TE RGLSWS+G +
Sbjct: 379 PTSVHRLKPADIKVIGALGDSLTAGNGAGSRPGNILDVLTEYRGLSWSIGAD 430
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
P +V++L+P DI +V A+GDS+T G A+N S + RGLSWS+G
Sbjct: 1082 PTSVHKLQPADIKVVAALGDSLTTAVGARASNSSDLLMSWRGLSWSIG 1129
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 22 SPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
S PP +V+ LRP D+ +V A+GDS+TAG+GI + + + V T+ RGLS+S G
Sbjct: 722 SASPPTSVHALRPADVRVVAALGDSLTAGSGIGSKPGDLADVITQYRGLSYSSG 775
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 12 PFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSIT 48
PF C + +P +V+ L P DI ++ AIGD T
Sbjct: 44 PFSCSPKKLGLNMPSESVHTLTPADIKLIAAIGDMET 80
>sp|Q05017|PLB1_RABIT Phospholipase B1, membrane-associated OS=Oryctolagus cuniculus
GN=PLB1 PE=2 SV=1
Length = 1458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
P +V++L+P DI ++GA+GDS+TAGNG + N V T+ RGLSWSVG
Sbjct: 380 PTSVHRLKPADIKVIGAMGDSLTAGNGAGSQPGNILDVLTQYRGLSWSVG 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 26 PNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
PN+V++L+PGDI +V A+GDS+T G +N S RGLSWS+G
Sbjct: 1083 PNSVHELQPGDIKVVAALGDSLTLAMGARPSNSSDPPMFWRGLSWSIG 1130
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 7/65 (10%)
Query: 13 FPCDLSQARSPL--PPNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGL 68
PC + RSP PP +V+ LRP DI +V A+GDS+TAG GI + + S T+ RGL
Sbjct: 715 LPC---RDRSPSASPPTSVHALRPADIQVVAALGDSLTAGIGIGSKPNDLSDGTTQYRGL 771
Query: 69 SWSVG 73
S+S G
Sbjct: 772 SYSSG 776
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%)
Query: 12 PFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENR 66
PFPCD +P +V+ LRP DI V AIG+ TA + Q TE R
Sbjct: 45 PFPCDPKTLAESVPSESVHSLRPSDIKFVAAIGNVETAPDSGADDLEEQDGTEKR 99
>sp|O28542|G3P_ARCFU Glyceraldehyde-3-phosphate dehydrogenase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=gap PE=3 SV=1
Length = 340
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 1 MEV----KVQPHYEGPFPCDLSQARSPL---PPNNVNQLRPGDIDIVGAIGDSITAGNGI 53
MEV K +P +E L R PL P NV I+I G I D + + +
Sbjct: 28 MEVVGVTKTRPDFEA----KLGAKRYPLYVAKPENVELFERAGIEIQGTIEDLLPKADIV 83
Query: 54 VATNPSQVNTENRG 67
V +P++V EN+
Sbjct: 84 VDCSPNKVGAENKA 97
>sp|Q11KE0|DXS_MESSB 1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp.
(strain BNC1) GN=dxs PE=3 SV=1
Length = 650
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 13 FPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQ---VNTENRGLS 69
FP DL Q P +LR ID V G + AG G+V + +T + L
Sbjct: 28 FPSDLKQIPEEDLPQLAEELRAEMIDAVSQTGGHLGAGLGVVELTVALHYIFDTPHDRLI 87
Query: 70 WSVGKNFGPAR 80
W VG P +
Sbjct: 88 WDVGHQAYPHK 98
>sp|O73787|GCP3_XENLA Gamma-tubulin complex component 3 homolog OS=Xenopus laevis
GN=tubgcp3 PE=1 SV=1
Length = 906
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 11 GPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSW 70
GP P + Q +S PN + LR + + ++ AG PSQ +T +GL
Sbjct: 172 GPTPQSIIQGQSNQTPNMGDALRQ---QLGSRLAWTLAAGQ-----QPSQQSTTTKGLPN 223
Query: 71 SVGKNFGPARRRPANHYQVEL 91
+V +N RR + VE+
Sbjct: 224 TVSRNVPRTRREGDSSGSVEI 244
>sp|Q971K2|G3P_SULTO Glyceraldehyde-3-phosphate dehydrogenase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=gap
PE=3 SV=1
Length = 343
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 4 KVQPHYEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNT 63
K P+YE D + +N+ + I + G I D + + +V T P+ V
Sbjct: 35 KTSPNYEAII-ADKKGIKIYTVKDNIGKFEKSGIRVAGTIEDMVKEADIVVDTTPNGVGA 93
Query: 64 ENRGLSWSVGKN 75
+ L S+GKN
Sbjct: 94 TYKPLYQSLGKN 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,356,165
Number of Sequences: 539616
Number of extensions: 1768175
Number of successful extensions: 3961
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3926
Number of HSP's gapped (non-prelim): 35
length of query: 106
length of database: 191,569,459
effective HSP length: 75
effective length of query: 31
effective length of database: 151,098,259
effective search space: 4684046029
effective search space used: 4684046029
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)