Your job contains 1 sequence.
>psy3103
MSIQTSPEVREIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL
VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY
AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG
VEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKLK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3103
(217 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica... 386 1.2e-34 1
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN... 387 1.3e-34 1
UNIPROTKB|E1C287 - symbol:E1C287 "Uncharacterized protein... 375 1.3e-34 1
UNIPROTKB|A2PYH4 - symbol:HFM1 "Probable ATP-dependent DN... 387 2.0e-34 1
UNIPROTKB|F1S4E9 - symbol:HFM1 "Uncharacterized protein" ... 378 1.8e-33 1
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ... 376 2.9e-33 1
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ... 375 3.8e-33 1
UNIPROTKB|E2R5U9 - symbol:HFM1 "Uncharacterized protein" ... 375 3.9e-33 1
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen... 346 2.8e-30 1
SGD|S000003503 - symbol:SLH1 "Putative RNA helicase relat... 180 1.1e-18 2
ZFIN|ZDB-GENE-081105-64 - symbol:si:ch211-251j10.5 "si:ch... 170 5.7e-18 2
UNIPROTKB|E1BH78 - symbol:LOC100850262 "Uncharacterized p... 168 1.2e-17 2
UNIPROTKB|O75643 - symbol:SNRNP200 "U5 small nuclear ribo... 168 1.2e-17 2
UNIPROTKB|F1LNJ2 - symbol:Ascc3l1 "Protein Ascc3l1" speci... 167 1.2e-17 2
UNIPROTKB|G4N3Z7 - symbol:MGG_05900 "Uncharacterized prot... 223 6.2e-17 1
WB|WBGene00013189 - symbol:Y54E2A.4 species:6239 "Caenorh... 173 7.0e-17 2
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica... 219 1.2e-16 1
TAIR|locus:2089144 - symbol:RCK "ROCK-N-ROLLERS" species:... 218 1.5e-16 1
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg... 162 2.8e-16 2
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m... 168 1.2e-15 2
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe... 158 1.4e-15 2
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"... 158 1.7e-15 2
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"... 158 2.3e-15 2
TAIR|locus:2059969 - symbol:AT2G42270 species:3702 "Arabi... 159 6.6e-15 2
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe... 157 1.1e-14 2
ASPGD|ASPL0000030426 - symbol:AN5514 species:162425 "Emer... 201 1.2e-14 1
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe... 155 1.6e-14 2
TAIR|locus:2037375 - symbol:emb1507 "embryo defective 150... 162 2.0e-14 2
DICTYBASE|DDB_G0290389 - symbol:ascc3 "activating signal ... 157 6.0e-14 2
FB|FBgn0263599 - symbol:l(3)72Ab "lethal (3) 72Ab" specie... 164 1.2e-13 2
CGD|CAL0003134 - symbol:orf19.3980 species:5476 "Candida ... 186 7.2e-13 1
DICTYBASE|DDB_G0270042 - symbol:ascc3l "U5 small nuclear ... 140 8.0e-13 2
ASPGD|ASPL0000044033 - symbol:AN2482 species:162425 "Emer... 151 6.0e-12 2
POMBASE|SPBC13G1.10c - symbol:mug81 "ATP-dependent RNA he... 141 1.1e-11 2
UNIPROTKB|F1SU44 - symbol:F1SU44 "Uncharacterized protein... 168 2.8e-11 1
UNIPROTKB|H9L1I7 - symbol:SNRNP200 "Uncharacterized prote... 166 3.1e-11 1
ASPGD|ASPL0000051297 - symbol:AN10194 species:162425 "Eme... 146 8.6e-11 2
UNIPROTKB|I3LAA7 - symbol:I3LAA7 "Uncharacterized protein... 157 1.1e-10 1
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ... 164 1.6e-10 1
UNIPROTKB|G4N5J1 - symbol:MGG_06124 "Activating signal co... 127 2.5e-10 2
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh... 160 4.7e-10 1
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc... 160 4.7e-10 1
UNIPROTKB|I3LVA7 - symbol:I3LVA7 "Uncharacterized protein... 126 4.5e-08 1
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato... 141 7.7e-08 2
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli... 125 5.5e-07 2
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica... 125 5.5e-07 2
POMBASE|SPAC9.03c - symbol:brr2 "U5 snRNP complex subunit... 143 7.1e-07 1
SGD|S000000974 - symbol:BRR2 "RNA-dependent ATPase RNA he... 139 1.3e-06 2
UNIPROTKB|B4E0P5 - symbol:SNRNP200 "U5 small nuclear ribo... 116 0.00029 1
>RGD|1584010 [details] [associations]
symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 IPI:IPI00766186
Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
Length = 954
Score = 386 (140.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 86/180 (47%), Positives = 123/180 (68%)
Query: 44 DRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQ---KS-QRASQ-PIRFVAV 98
D + I QL R +L+ VH++ +E+RGP LE VV RM+TVQ K+ + AS P+RFVAV
Sbjct: 129 DNSFI-QLVRL-FLIDEVHVIKDENRGPTLEVVVSRMKTVQSLSKTLENASPAPVRFVAV 186
Query: 99 SATIPNIYDIALWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYK 157
SATIPN DIA WL G +P V ++D+S RPVKL K+V GFP+ +Q+ F+F++ L+YK
Sbjct: 187 SATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGFPSSSNQTEFKFDLALNYK 246
Query: 158 LKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKLK 217
+ S+I YSD KPTL+FCATRKGV+ ++L ++ + E + + K ++ D+KLK
Sbjct: 247 VYSVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIITVEQKLRLQKSAYSIRDSKLK 306
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 13 VDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
+ K +I D+KLKD L +GYHHAGM DR ++E+LF SG L +L
Sbjct: 293 LQKSAYSIRDSKLKDTLVYGVGYHHAGMELSDRKLVEELFTSGDLPVL 340
>UNIPROTKB|A6NGI5 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
Uniprot:A6NGI5
Length = 1114
Score = 387 (141.3 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 82/181 (45%), Positives = 122/181 (67%)
Query: 44 DRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQ------KSQRASQPIRFVA 97
D +++ QL R +L+ VH++ +E+RGP LE VV RM+TVQ K+ + P+RFVA
Sbjct: 77 DNSLV-QLVRL-FLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVA 134
Query: 98 VSATIPNIYDIALWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSY 156
VSATIPN DIA WL G +P V ++D+S RPVKL K+V GFP +Q+ F+F++ L+Y
Sbjct: 135 VSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGFPCSSNQTEFKFDLTLNY 194
Query: 157 KLKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKL 216
K+ S+I YSD KPTL+FCATRKGV+ ++L ++ + E ++ + K ++ D+KL
Sbjct: 195 KIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQKQRLQKYAYSVRDSKL 254
Query: 217 K 217
+
Sbjct: 255 R 255
>UNIPROTKB|E1C287 [details] [associations]
symbol:E1C287 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00550000074822 EMBL:AADN02012856
IPI:IPI00587427 Ensembl:ENSGALT00000009827 OMA:HAVKDES
Uniprot:E1C287
Length = 177
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 83/167 (49%), Positives = 112/167 (67%)
Query: 43 EDRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQKSQ-RASQ-----PIRFV 96
+D +I+ QL R +L+ VH++ +ESRG LE VV RM+TVQ S R S+ P+RFV
Sbjct: 12 KDNSIV-QLVRL-FLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHDVPPLRFV 69
Query: 97 AVSATIPNIYDIALWLGFGK-PTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLS 155
AVSATIPN DIA WL GK P V ++D+ RPVKL KIV GFP SQ+ F+F++ L+
Sbjct: 70 AVSATIPNAEDIAEWLSDGKMPAVCLKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLN 129
Query: 156 YKLKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVRE 202
YK+ S+I YSD KP L+FCATRKGV+ ++L ++ S E ++
Sbjct: 130 YKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLSVEQKQ 176
>UNIPROTKB|A2PYH4 [details] [associations]
symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
Length = 1435
Score = 387 (141.3 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 82/181 (45%), Positives = 122/181 (67%)
Query: 44 DRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQ------KSQRASQPIRFVA 97
D +++ QL R +L+ VH++ +E+RGP LE VV RM+TVQ K+ + P+RFVA
Sbjct: 398 DNSLV-QLVRL-FLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVA 455
Query: 98 VSATIPNIYDIALWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSY 156
VSATIPN DIA WL G +P V ++D+S RPVKL K+V GFP +Q+ F+F++ L+Y
Sbjct: 456 VSATIPNAEDIAEWLSDGERPAVCLKMDESHRPVKLQKVVLGFPCSSNQTEFKFDLTLNY 515
Query: 157 KLKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKL 216
K+ S+I YSD KPTL+FCATRKGV+ ++L ++ + E ++ + K ++ D+KL
Sbjct: 516 KIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQKQRLQKYAYSVRDSKL 575
Query: 217 K 217
+
Sbjct: 576 R 576
>UNIPROTKB|F1S4E9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:CU179709
Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
Length = 1438
Score = 378 (138.1 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 80/181 (44%), Positives = 120/181 (66%)
Query: 44 DRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQ------PIRFVA 97
D +++ QL R +L+ VH++ +E+RGP LE VV RM+TVQ A + P+RFVA
Sbjct: 400 DNSLV-QLVRL-FLIDEVHVVKDENRGPTLEVVVSRMKTVQFLSHAVENPRNIIPMRFVA 457
Query: 98 VSATIPNIYDIALWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSY 156
VSATIPN DIA WL G + + ++D+ RPVKL K+V GFP +Q+ F+F++ L+Y
Sbjct: 458 VSATIPNAEDIAEWLSDGERSAICLKMDEKHRPVKLRKVVLGFPCSNNQTEFKFDLTLNY 517
Query: 157 KLKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKL 216
K+ S++ YSD KPTL+FCATRKGV+ +IL ++ + E ++ + KC ++ D+KL
Sbjct: 518 KIASVVQTYSDQKPTLVFCATRKGVQQAASILVKDAKFIMTVEQKQRLHKCAYSIRDSKL 577
Query: 217 K 217
+
Sbjct: 578 R 578
Score = 116 (45.9 bits), Expect = 0.00085, P = 0.00085
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 8 EVREIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
E ++ + KC +I D+KL+D+L + YHHAGM DR ++E F G L +L
Sbjct: 560 EQKQRLHKCAYSIRDSKLRDLLIHGVAYHHAGMELSDRKVVEGAFTVGDLPVL 612
>UNIPROTKB|F1MFR1 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
Length = 1438
Score = 376 (137.4 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 78/169 (46%), Positives = 114/169 (67%)
Query: 56 YLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQ------PIRFVAVSATIPNIYDIA 109
+L+ VH++ +E+RGP LE VV RM+TVQ A + P+RFVAVSATIPN DIA
Sbjct: 410 FLIDEVHVVKDENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVAVSATIPNAEDIA 469
Query: 110 LWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDN 168
WL G + V ++D+ RPVKL K+V GFP+ +Q+ F+F++ L+YK+ SII YSD
Sbjct: 470 EWLSDGERSAVCLKMDERHRPVKLRKVVLGFPSSDNQTEFKFDLTLNYKIASIIQTYSDQ 529
Query: 169 KPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKLK 217
KPTL+FCATRKGV+ ++L ++ + E ++ + KC ++ D+KL+
Sbjct: 530 KPTLVFCATRKGVQQAASVLVKDAKFIMTVEQKQRLQKCAYSIKDSKLR 578
>UNIPROTKB|E2RA34 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
Uniprot:E2RA34
Length = 1437
Score = 375 (137.1 bits), Expect = 3.8e-33, P = 3.8e-33
Identities = 80/180 (44%), Positives = 119/180 (66%)
Query: 44 DRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQ-----PIRFVAV 98
D +++ QL R +L+ VH++ +E+RGP LE VV RM+TVQ S+ P+RFVAV
Sbjct: 400 DNSLV-QLVRL-FLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAV 457
Query: 99 SATIPNIYDIALWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYK 157
SATIPN DIA WL G +P V ++D+ RPVKL K+V GFP +Q+ F+F++ L+YK
Sbjct: 458 SATIPNAEDIAEWLSDGERPAVCLKMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYK 517
Query: 158 LKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKLK 217
+ +I YSD KPTL+FCATRKGV+ ++L ++ + E ++ + K ++ D+KL+
Sbjct: 518 IAGVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMAVEQKQRLQKYAYSIRDSKLR 577
>UNIPROTKB|E2R5U9 [details] [associations]
symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
Length = 1466
Score = 375 (137.1 bits), Expect = 3.9e-33, P = 3.9e-33
Identities = 80/180 (44%), Positives = 119/180 (66%)
Query: 44 DRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQ-----PIRFVAV 98
D +++ QL R +L+ VH++ +E+RGP LE VV RM+TVQ S+ P+RFVAV
Sbjct: 400 DNSLV-QLVRL-FLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAV 457
Query: 99 SATIPNIYDIALWLGFG-KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYK 157
SATIPN DIA WL G +P V ++D+ RPVKL K+V GFP +Q+ F+F++ L+YK
Sbjct: 458 SATIPNAEDIAEWLSDGERPAVCLKMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYK 517
Query: 158 LKSIIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKLK 217
+ +I YSD KPTL+FCATRKGV+ ++L ++ + E ++ + K ++ D+KL+
Sbjct: 518 IAGVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMAVEQKQRLQKYAYSIRDSKLR 577
>ZFIN|ZDB-GENE-061207-43 [details] [associations]
symbol:hfm1 "HFM1, ATP-dependent DNA helicase
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0008026
GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
IPI:IPI00897259 ProteinModelPortal:F1QWJ0
Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
Length = 1049
Score = 346 (126.9 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 71/168 (42%), Positives = 113/168 (67%)
Query: 56 YLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQP-----IRFVAVSATIPNIYDIAL 110
+L+ VH++ +++RG LE VV RM+T+ ++A P +RFVAVSATIPNI D++
Sbjct: 139 FLVDEVHVVKDKTRGATLEVVVSRMKTMHFYRQAINPESKASVRFVAVSATIPNIQDVSE 198
Query: 111 WLGFGK-PTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNK 169
WL P ++D+S RPVKL K+V GFP +Q+ F+F++ L+YKL +II YSD K
Sbjct: 199 WLSDESGPATCLEMDESHRPVKLRKVVLGFPCGSNQNEFKFDLSLNYKLANIIQTYSDQK 258
Query: 170 PTLIFCATRKGVEHTCTILRQEMSIQTSPEVREIVDKCMSNMMDNKLK 217
PTL+FC+TRKGV+ + ++L ++ S + ++ + K ++++D KL+
Sbjct: 259 PTLVFCSTRKGVQQSASVLAKDARFIMSIDHKQRLVKYANSLLDAKLR 306
>SGD|S000003503 [details] [associations]
symbol:SLH1 "Putative RNA helicase related to Ski2p"
species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
"cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
Length = 1967
Score = 180 (68.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 47/142 (33%), Positives = 71/142 (50%)
Query: 57 LMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGK 116
+M +HLL + RGP+LE +V RM + S + QP+R + +S + N YD+A WLG
Sbjct: 1264 IMDEIHLLASD-RGPILEMIVSRMNYI--SSQTKQPVRLLGMSTAVSNAYDMAGWLGVKD 1320
Query: 117 PTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCA 176
+Y S RPV L + GFP + M + + I Q+S +KP LIF A
Sbjct: 1321 HGLY-NFPSSVRPVPLKMYIDGFPDNLAFCPLMKTM--NKPVFMAIKQHSPDKPALIFVA 1377
Query: 177 TRKGVEHTCTILRQEMSIQTSP 198
+R+ T L ++ +P
Sbjct: 1378 SRRQTRLTALDLIHLCGMEDNP 1399
Score = 134 (52.2 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 44/128 (34%), Positives = 66/128 (51%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSATIPNIYDIALWLG 113
L+I+ VHLL E+ RG V+E +V R +R V+ SQ IR + +SAT+PN D+A +LG
Sbjct: 423 LLIIDEVHLLHED-RGSVIETLVARTLRQVESSQSM---IRIIGLSATLPNFMDVADFLG 478
Query: 114 FGKPTVYAQIDDSFRPVKLTKIVRGFPTKPS--QSTFQFEMMLSYKLKSIIMQYSDNKPT 171
+ D SFRP L + + G K QS + + KL +I +
Sbjct: 479 VNRQIGMFYFDQSFRPKPLEQQLLGCRGKAGSRQSKENIDKVAYDKLSEMIQR---GYQV 535
Query: 172 LIFCATRK 179
++F +RK
Sbjct: 536 MVFVHSRK 543
Score = 91 (37.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 14 DKCMSNIMDNKLKDM---LRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
DK +++ N+ KDM + G HHAGM+ DR + E++F+ G + +L
Sbjct: 573 DKYSRSLVKNRDKDMKEIFQFGFGIHHAGMARSDRNLTEKMFKDGAIKVL 622
>ZFIN|ZDB-GENE-081105-64 [details] [associations]
symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
HOVERGEN:HBG051896 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
Length = 2134
Score = 170 (64.9 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 40/119 (33%), Positives = 68/119 (57%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
VHL+G ++ GPVLE + RMR + S + +PIR VA+S+++ N D+A WLG +
Sbjct: 1452 VHLIGGDN-GPVLEVICSRMRYI--SSQIERPIRIVALSSSLSNAKDVAHWLGCSTTATF 1508
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ RPV L ++GF +Q+ + ++ + IM++S +KP L+F +R+
Sbjct: 1509 -NFHPNVRPVPLELHIQGFNVSHTQTRL---LSMAKPVYHAIMKHSPSKPVLVFVPSRR 1563
Score = 161 (61.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/154 (31%), Positives = 80/154 (51%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSAT 101
+RT QL R L+I+ +HLL ++ RGPVLE+++ R T++ + + +R + +SAT
Sbjct: 599 ERTYT-QLVR---LIIIDEIHLLHDD-RGPVLESLIAR--TIRNVELTQEDVRLIGLSAT 651
Query: 102 IPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSI 161
+PN D+A L D+SFRPV L + G K + FQ + Y+
Sbjct: 652 LPNYEDVATCLRVDPSKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEK--- 708
Query: 162 IMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
IM+++ L+F +RK T +R +M ++
Sbjct: 709 IMEHAGKNQVLVFVHSRKETGKTARAIR-DMCLE 741
Score = 95 (38.5 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 6 SPEV-REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
S EV R ++C N+ +LKD+L HHAGM+ DRT++E LF ++ +LV
Sbjct: 755 STEVLRTEAEQC-KNL---ELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLV 807
>UNIPROTKB|E1BH78 [details] [associations]
symbol:LOC100850262 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
NextBio:20869492 Uniprot:E1BH78
Length = 2136
Score = 168 (64.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 52/155 (33%), Positives = 83/155 (53%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSA 100
+RT QL R L+IL +HLL ++ RGPVLEA+V R +R ++ +Q + +R + +SA
Sbjct: 602 ERTYT-QLVR---LVILDEIHLLHDD-RGPVLEALVARAIRNIEMTQ---EDVRLIGLSA 653
Query: 101 TIPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKS 160
T+PN D+A +L D+SFRPV L + G K + FQ + Y+
Sbjct: 654 TLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEK-- 711
Query: 161 IIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
IM+++ L+F +RK T +R +M ++
Sbjct: 712 -IMEHAGKNQVLVFVHSRKETGKTARAIR-DMCLE 744
Score = 167 (63.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 40/119 (33%), Positives = 67/119 (56%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
VHL+G E+ GPVLE + RMR + S + +PIR VA+S+++ N D+A WLG + +
Sbjct: 1456 VHLIGGEN-GPVLEVICSRMRYI--SSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF 1512
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ RPV L ++GF +Q+ + ++ + I ++S KP ++F +RK
Sbjct: 1513 -NFHPNVRPVPLELHIQGFNISHTQTRL---LSMAKPVYHAITKHSPKKPVIVFVPSRK 1567
Score = 95 (38.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 6 SPEV-REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
S EV R ++C N+ +LKD+L HHAGM+ DRT++E LF ++ +LV
Sbjct: 758 STEVLRTEAEQC-KNL---ELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLV 810
>UNIPROTKB|O75643 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
CleanEx:HS_SNRNP200 Genevestigator:O75643
GermOnline:ENSG00000144028 Uniprot:O75643
Length = 2136
Score = 168 (64.2 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 52/155 (33%), Positives = 83/155 (53%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSA 100
+RT QL R L+IL +HLL ++ RGPVLEA+V R +R ++ +Q + +R + +SA
Sbjct: 602 ERTYT-QLVR---LIILDEIHLLHDD-RGPVLEALVARAIRNIEMTQ---EDVRLIGLSA 653
Query: 101 TIPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKS 160
T+PN D+A +L D+SFRPV L + G K + FQ + Y+
Sbjct: 654 TLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEK-- 711
Query: 161 IIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
IM+++ L+F +RK T +R +M ++
Sbjct: 712 -IMEHAGKNQVLVFVHSRKETGKTARAIR-DMCLE 744
Score = 167 (63.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 40/119 (33%), Positives = 67/119 (56%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
VHL+G E+ GPVLE + RMR + S + +PIR VA+S+++ N D+A WLG + +
Sbjct: 1456 VHLIGGEN-GPVLEVICSRMRYI--SSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF 1512
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ RPV L ++GF +Q+ + ++ + I ++S KP ++F +RK
Sbjct: 1513 -NFHPNVRPVPLELHIQGFNISHTQTRL---LSMAKPVYHAITKHSPKKPVIVFVPSRK 1567
Score = 95 (38.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 6 SPEV-REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
S EV R ++C N+ +LKD+L HHAGM+ DRT++E LF ++ +LV
Sbjct: 758 STEVLRTEAEQC-KNL---ELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLV 810
>UNIPROTKB|F1LNJ2 [details] [associations]
symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973
GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
Length = 2139
Score = 167 (63.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 40/119 (33%), Positives = 67/119 (56%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
VHL+G E+ GPVLE + RMR + S + +PIR VA+S+++ N D+A WLG + +
Sbjct: 1459 VHLIGGEN-GPVLEVICSRMRYI--SSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF 1515
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ RPV L ++GF +Q+ + ++ + I ++S KP ++F +RK
Sbjct: 1516 -NFHPNVRPVPLELHIQGFNISHTQTRL---LSMAKPVYHAITKHSPKKPVIVFVPSRK 1570
Score = 167 (63.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 51/155 (32%), Positives = 83/155 (53%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSA 100
+RT QL R L++L +HLL ++ RGPVLEA+V R +R ++ +Q + +R + +SA
Sbjct: 602 ERTYT-QLVR---LIVLDEIHLLHDD-RGPVLEALVARAIRNIEMTQ---EDVRLIGLSA 653
Query: 101 TIPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKS 160
T+PN D+A +L D+SFRPV L + G K + FQ + Y+
Sbjct: 654 TLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEK-- 711
Query: 161 IIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
IM+++ L+F +RK T +R +M ++
Sbjct: 712 -IMEHAGKNQVLVFVHSRKETGKTARAIR-DMCLE 744
Score = 95 (38.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 6 SPEV-REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
S EV R ++C N+ +LKD+L HHAGM+ DRT++E LF ++ +LV
Sbjct: 758 STEVLRTEAEQC-KNL---ELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLV 810
>UNIPROTKB|G4N3Z7 [details] [associations]
symbol:MGG_05900 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00278 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:CM001233 GO:GO:0003677 GO:GO:0006281 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 GO:GO:0008026 KO:K15271 RefSeq:XP_003711726.1
ProteinModelPortal:G4N3Z7 EnsemblFungi:MGG_05900T0 GeneID:2684075
KEGG:mgr:MGG_05900 Uniprot:G4N3Z7
Length = 1508
Score = 223 (83.6 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 58/135 (42%), Positives = 75/135 (55%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFG----- 115
VH L +++RG LE ++CRM+T Q S IR VA+SAT+PN D+A WLG G
Sbjct: 385 VHFL-KDTRGATLEVLICRMKT-QVSN-----IRVVALSATVPNSEDVAKWLGRGNTDNH 437
Query: 116 KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFC 175
+P + FRPV+L K V G S + FQFE L KL +I +S KP ++FC
Sbjct: 438 QPARLETFGEEFRPVRLQKHVYGLHC--SGNAFQFEPQLDTKLCEVITTHSQKKPIIVFC 495
Query: 176 ATRKGVEHTCTILRQ 190
TRK E T L Q
Sbjct: 496 FTRKSCELTAKKLSQ 510
>WB|WBGene00013189 [details] [associations]
symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
Length = 2017
Score = 173 (66.0 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 45/133 (33%), Positives = 72/133 (54%)
Query: 49 EQLFRSGYLMI-LVHLLGEESRGPVLEAVVCRMRTV-QKSQRASQPIRFVAVSATIPNIY 106
E + R G +++ VHLLG + RG VLEA+V R++ + ++S +P+R + +S + N
Sbjct: 1295 EYVRRVGLIVLDEVHLLGVD-RGAVLEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAG 1353
Query: 107 DIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYS 166
D+A WLG Y S RPV ++ ++GFP + +YK I+ YS
Sbjct: 1354 DVAEWLGIPDEACY-NFRPSVRPVPISVHIQGFPGQHYCPRMGLMNKPAYKA---ILTYS 1409
Query: 167 DNKPTLIFCATRK 179
KP LIF ++R+
Sbjct: 1410 PRKPVLIFVSSRR 1422
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/127 (34%), Positives = 61/127 (48%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSATIPNIYDIALWLG 113
L+I+ VHLL +E RGPV+E +V R +R V+ SQ IR V +SAT+PN D+A +L
Sbjct: 443 LLIIDEVHLLHDE-RGPVIETLVARTLRQVEMSQSG---IRIVGLSATLPNFIDVARFLR 498
Query: 114 FGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLI 173
D FRPV LT+ G K +M + ++ L+
Sbjct: 499 VNPYKGLFFFDGRFRPVPLTQKFIG-TRKAGNFRDNLTLMDNVCYDEVVDFVKRGHQVLV 557
Query: 174 FCATRKG 180
F TR G
Sbjct: 558 FVHTRNG 564
Score = 81 (33.6 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 14 DKCMSNIMDNK--LKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
DK + NI N+ + + + +G HHAG+ +DR ++E+ F G++ +L
Sbjct: 599 DKAI-NICRNRAQISPLFQRGMGIHHAGLCRQDRILMERCFAEGHVSVL 646
>SGD|S000003220 [details] [associations]
symbol:HFM1 "Meiosis specific DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
"meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
GermOnline:YGL251C Uniprot:P51979
Length = 1187
Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 56/143 (39%), Positives = 82/143 (57%)
Query: 50 QLFRSGYLMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYD 107
+LF L+++ +H + +E RG LE ++ RM T+ Q IRFVA+SAT+PNI D
Sbjct: 257 RLFELVKLVLVDEIHTI-KEKRGASLEVILTRMNTM------CQNIRFVALSATVPNIED 309
Query: 108 IALWLGFGK--PTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQY 165
+ALWL P D+S+R V+LTK V G+ ++ FQ + + + KL II ++
Sbjct: 310 LALWLKTNNELPANILSFDESYRQVQLTKFVYGYSFN-CKNDFQKDAIYNSKLIEIIEKH 368
Query: 166 SDNKPTLIFCATRKGVEHTCTIL 188
+DN+P LIFC TR T L
Sbjct: 369 ADNRPVLIFCPTRASTISTAKFL 391
>TAIR|locus:2089144 [details] [associations]
symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
"mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
Uniprot:Q5D892
Length = 1133
Score = 218 (81.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 56/135 (41%), Positives = 77/135 (57%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQ--RASQ--PIRFVAVSATIPNIYDIALWLGFGK 116
VHLL + RG LEA+V R++ + + R+S +R +AVSATIPNI D+A WL
Sbjct: 167 VHLLNDP-RGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAEWLKV-- 223
Query: 117 PTV-YAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFC 175
PT + + RPVKLT V G+ +++ F FE L + I+MQYS K L+FC
Sbjct: 224 PTAGIKRFGEEMRPVKLTTKVFGYAA--AKNDFLFEKRLQNYIYDILMQYSKGKSALVFC 281
Query: 176 ATRKGVEHTCTILRQ 190
+TRKG + L Q
Sbjct: 282 STRKGAQEAAQKLAQ 296
>MGI|MGI:1925237 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex
subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
Length = 2198
Score = 162 (62.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 52/181 (28%), Positives = 87/181 (48%)
Query: 43 EDRTIIEQLFRSGYLMI-LVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSAT 101
++R+ ++Q+ L+I +HLLGEE RGPVLE +V R + S +P+R V +S
Sbjct: 1440 QNRSYVQQV---NILIIDEIHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTA 1493
Query: 102 IPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSI 161
+ N D+A WL + ++ S RPV L ++GFP Q ++
Sbjct: 1494 LANARDLADWLNIKQMGLF-NFRPSVRPVPLEVHIQGFP---GQHYCPRMASMNKPAFQA 1549
Query: 162 IMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPEV-----REIVDKCMSNMMDNKL 216
I +S KP LIF ++R+ T L ++ + P+ + +D + + D+ L
Sbjct: 1550 IRSHSPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMDNIIGTVRDSNL 1609
Query: 217 K 217
K
Sbjct: 1610 K 1610
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 608 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 664
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G K + Q M +S++ Q ++F
Sbjct: 665 NPYIGLFYFDGRFRPVPLGQTFLGI--KSTNKMQQLNNMDEVCYESVLKQVKAGHQVMVF 722
Query: 175 CATRKGVEHTCTIL 188
R T L
Sbjct: 723 VHARNATVRTAMSL 736
Score = 87 (35.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 23 NK-LKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
NK ++++ HHAGM +DR ++E LF +G++ +LV
Sbjct: 769 NKQVRELFSDGFSIHHAGMLRQDRNLVENLFSNGHIKVLV 808
Score = 53 (23.7 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 19 NIMDNKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
N+ +KLKDM + IG+ HH + + + + Q+
Sbjct: 1146 NLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQI 1180
>FB|FBgn0038344 [details] [associations]
symbol:CG5205 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
Length = 2183
Score = 168 (64.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLGE+ RGPV+E +V R + S + IR V +S + N D+A WLG K +Y
Sbjct: 1466 IHLLGED-RGPVIEVIVSRTNFI--SSHTGRAIRIVGLSTALANAQDLANWLGINKMGLY 1522
Query: 121 AQIDDSFRPVKLTKIVRGFPTK---PSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCAT 177
S RPV L + GFP K P +T ++ I YS +PT++F ++
Sbjct: 1523 -NFKPSVRPVPLQVHINGFPGKHYCPRMAT------MNRPTFQAIRTYSPCEPTIVFVSS 1575
Query: 178 RKGVEHTCTILRQEMSIQTSPEV-----REIVDKCMSNMMDNKLK 217
R+ T L ++ +++P+ + ++ + N+ + LK
Sbjct: 1576 RRQTRLTALDLITFVAGESNPKQFLHIPEDEIELILQNIREQNLK 1620
Score = 134 (52.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 45/138 (32%), Positives = 64/138 (46%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSATIPNIYDIALWLG 113
L+I+ VHLL E RGPV+EA+V R +R V+ SQ IR V +SAT+PN D+A +L
Sbjct: 617 LLIIDEVHLLHGE-RGPVVEALVARTLRLVESSQSM---IRIVGLSATLPNYIDVAHFLR 672
Query: 114 FGKPTVYAQIDDSFRPVKL-TKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTL 172
D FRPV L T V K Q + K ++ + +
Sbjct: 673 VNPMKGLFYFDSRFRPVPLDTNFVGIKSVKQLQQIADMDQCCYQKCVEMVQE---GHQIM 729
Query: 173 IFCATRKGVEHTCTILRQ 190
+F R T ++R+
Sbjct: 730 VFVHARNATVRTANVIRE 747
Score = 75 (31.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 23 NK-LKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
NK L ++ + HHAGM DR ++E+ F G++ +LV
Sbjct: 778 NKQLVELFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLV 817
>UNIPROTKB|Q8N3C0 [details] [associations]
symbol:ASCC3 "Activating signal cointegrator 1 complex
subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
Length = 2202
Score = 158 (60.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 49/163 (30%), Positives = 78/163 (47%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLGEE RGPVLE +V R + S +P+R V +S + N D+A WL + ++
Sbjct: 1455 IHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTALANARDLADWLNIKQMGLF 1511
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L ++GFP Q ++ I +S KP LIF ++R+
Sbjct: 1512 -NFRPSVRPVPLEVHIQGFP---GQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQ 1567
Query: 181 VEHTCTILRQEMSIQTSP------EVREIVDKCMSNMMDNKLK 217
T L ++ + P + RE+ + ++ + D+ LK
Sbjct: 1568 TRLTALELIAFLATEEDPKQWLNMDEREM-ENIIATVRDSNLK 1609
Score = 134 (52.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 607 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 663
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G K + Q M ++++ Q ++F
Sbjct: 664 NPYIGLFFFDGRFRPVPLGQTFLGI--KCANKMQQLNNMDEVCYENVLKQVKAGHQVMVF 721
Query: 175 CATRKGVEHTCTIL 188
R T L
Sbjct: 722 VHARNATVRTAMSL 735
Score = 90 (36.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 12 IVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
+ +K + + +++++ HHAGM +DR ++E LF +G++ +LV
Sbjct: 758 LAEKQVQRSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLV 807
Score = 49 (22.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 23 NKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
+KLKDM + IG+ HH + + + + Q+
Sbjct: 1149 DKLKDMRKDEIGHILHHVNIGLKVKQCVHQI 1179
>UNIPROTKB|E2QVY0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
Uniprot:E2QVY0
Length = 1925
Score = 158 (60.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLGEE RGPVLE +V R + S +P+R V +S + N D+A WL + ++
Sbjct: 1455 IHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTALANARDLADWLNIHQMGLF 1511
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L ++GFP Q ++ I +S KP LIF ++R+
Sbjct: 1512 -NFRPSVRPVPLEVHIQGFP---GQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQ 1567
Query: 181 VEHTCTILRQEMSIQTSP------EVREIVDKCMSNMMDNKLK 217
T L ++ + P + RE+ + + + D+ LK
Sbjct: 1568 TRLTALELIAFLATEEDPKQWLNMDEREM-ENIIGTLRDSNLK 1609
Score = 142 (55.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 607 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 663
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G K + Q M +S++ Q ++F
Sbjct: 664 NPCIGLFYFDGRFRPVPLGQTFLG--VKSANKVQQLNNMDEVCYESVLKQVKAGHQVMVF 721
Query: 175 CATRKGVEHTCTIL 188
R T L
Sbjct: 722 VHARNATVRTAMSL 735
Score = 88 (36.0 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 14 DKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
+K + + +++++ HHAGM +DR ++E LF +G++ +LV
Sbjct: 760 EKQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLV 807
Score = 53 (23.7 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 19 NIMDNKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
N+ +KLKDM + IG+ HH + + + + Q+
Sbjct: 1145 NLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQI 1179
>UNIPROTKB|F6Y2F0 [details] [associations]
symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
Uniprot:F6Y2F0
Length = 2202
Score = 158 (60.7 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLGEE RGPVLE +V R + S +P+R V +S + N D+A WL + ++
Sbjct: 1455 IHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTALANARDLADWLNIHQMGLF 1511
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L ++GFP Q ++ I +S KP LIF ++R+
Sbjct: 1512 -NFRPSVRPVPLEVHIQGFP---GQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQ 1567
Query: 181 VEHTCTILRQEMSIQTSP------EVREIVDKCMSNMMDNKLK 217
T L ++ + P + RE+ + + + D+ LK
Sbjct: 1568 TRLTALELIAFLATEEDPKQWLNMDEREM-ENIIGTLRDSNLK 1609
Score = 142 (55.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 607 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 663
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G K + Q M +S++ Q ++F
Sbjct: 664 NPCIGLFYFDGRFRPVPLGQTFLG--VKSANKVQQLNNMDEVCYESVLKQVKAGHQVMVF 721
Query: 175 CATRKGVEHTCTIL 188
R T L
Sbjct: 722 VHARNATVRTAMSL 735
Score = 88 (36.0 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 14 DKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
+K + + +++++ HHAGM +DR ++E LF +G++ +LV
Sbjct: 760 EKQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLV 807
Score = 53 (23.7 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 19 NIMDNKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
N+ +KLKDM + IG+ HH + + + + Q+
Sbjct: 1145 NLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVHQI 1179
>TAIR|locus:2059969 [details] [associations]
symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
Genevestigator:O48534 Uniprot:O48534
Length = 2172
Score = 159 (61.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 59/185 (31%), Positives = 93/185 (50%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSAT 101
DRT QL R L+I+ +HLL +++RGPVLE++V R T+++ + + IR V +SAT
Sbjct: 627 DRTYT-QLVR---LLIIDEIHLL-DDNRGPVLESIVAR--TLRQIESTKEHIRLVGLSAT 679
Query: 102 IPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSI 161
+PN D+A +L D S+RPV L + G K FQ + Y+
Sbjct: 680 LPNCDDVASFLRVDLKNGLFIFDRSYRPVPLGQQYIGINVKKPLRRFQLMNDICYQK--- 736
Query: 162 IMQYSDNKPTLIFCATRKGVEHTCTILRQE-MSIQT-------SPEVREIVDKCMSNMM- 212
++ + LIF +RK T +R M+ T + REI+ KC++ ++
Sbjct: 737 VVAVAGKHQVLIFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQSREIL-KCLAGLLK 795
Query: 213 DNKLK 217
+N LK
Sbjct: 796 NNDLK 800
Score = 149 (57.5 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 43 EDRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATI 102
+ R I+Q+ S +++ +HL+G + G VLE +V RMR + S + IR VA+S ++
Sbjct: 1466 KQRKYIQQV--SLFIVDELHLIGGQG-GQVLEVIVSRMRYI--SSQVGNKIRIVALSTSL 1520
Query: 103 PNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSII 162
N D+ W+G V+ + RPV L + G ++ Q +Y + I
Sbjct: 1521 ANAKDLGEWIGASSCGVF-NFPPNVRPVPLEIHIHGVDILSFEARMQAMTKPTY---TAI 1576
Query: 163 MQYSDNK-PTLIFCATRKGVEHTCT--ILRQEMSIQTSPE 199
+Q++ NK P ++F TRK V T I M SP+
Sbjct: 1577 VQHAKNKKPAIVFVPTRKHVRLTAVDLIAYSHMDNMKSPD 1616
Score = 109 (43.4 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 3 IQTSPEVREIVDKCMSNIM-DNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
++ + REI+ KC++ ++ +N LK++L HHAG++ DR I+E FR G L +L+
Sbjct: 777 LKEDSQSREIL-KCLAGLLKNNDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLI 835
>UNIPROTKB|E1BNG3 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 Uniprot:E1BNG3
Length = 2201
Score = 157 (60.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 44/139 (31%), Positives = 67/139 (48%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLGEE RGPVLE +V R + S +P+R V +S + N D+A WL + ++
Sbjct: 1455 IHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTALANARDLADWLNIRQMGLF 1511
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L ++GFP Q ++ I +S KP LIF ++R+
Sbjct: 1512 -NFRPSVRPVPLEVHIQGFP---GQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQ 1567
Query: 181 VEHTCTILRQEMSIQTSPE 199
T L ++ + P+
Sbjct: 1568 TRLTALELIAFLATEEDPK 1586
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 607 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 663
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G K + Q M +S++ Q ++F
Sbjct: 664 NPCIGLFFFDGRFRPVPLGQTFLGI--KSANKVQQLNNMDEVCYESVLKQVKAGHQVMVF 721
Query: 175 CATRKGVEHTCTIL 188
R T L
Sbjct: 722 VHARNATVRTAMSL 735
Score = 88 (36.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 14 DKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
+K + + +++++ HHAGM +DR ++E LF +G++ +LV
Sbjct: 760 EKQVQKSRNRQVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLV 807
Score = 53 (23.7 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 19 NIMDNKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
N+ +KLKDM + IG+ HH + + + + Q+
Sbjct: 1145 NLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQI 1179
>ASPGD|ASPL0000030426 [details] [associations]
symbol:AN5514 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=IEA] [GO:0007129
"synapsis" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006268 "DNA unwinding involved in
replication" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 EMBL:BN001305 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00973 eggNOG:COG1204 EMBL:AACD01000094 GO:GO:0008026
KO:K15271 OrthoDB:EOG4WWVSR RefSeq:XP_663118.1
ProteinModelPortal:Q5B1R6 EnsemblFungi:CADANIAT00003572
GeneID:2871792 KEGG:ani:AN5514.2 HOGENOM:HOG000216651
Uniprot:Q5B1R6
Length = 1385
Score = 201 (75.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/146 (39%), Positives = 80/146 (54%)
Query: 56 YLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFG 115
+L+ VH L +E+RG LEAVV RM+++ + +RFVA+SATIPN DIA WLG
Sbjct: 376 FLIDEVHTL-KEARGATLEAVVSRMKSIGSN------VRFVALSATIPNSEDIATWLGRN 428
Query: 116 K-----PTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKP 170
P + FRPVKL K V G+ S + F F+ +L+ +II +S KP
Sbjct: 429 ATSQHVPAHREHFGEEFRPVKLQKFVYGYHF--SGNNFAFDKLLN---SNIIGTHSAKKP 483
Query: 171 TLIFCATRKGVEHTCTILRQEMSIQT 196
+IFC+TR T L + S+ +
Sbjct: 484 IMIFCSTRNSTVSTAKELARLWSMSS 509
>UNIPROTKB|F1NTD6 [details] [associations]
symbol:ascc3 "Activating signal cointegrator 1 complex
subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
KEGG:gga:421790 Uniprot:F1NTD6
Length = 2211
Score = 155 (59.6 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLG+E RGPVLE +V R + S +P+R V +S + N D+A WL + ++
Sbjct: 1464 IHLLGDE-RGPVLEVIVSRTNFI--SSHTEKPVRVVGLSTALANARDLADWLNINQMGLF 1520
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L ++GFP Q ++ I +S KP LIF ++R+
Sbjct: 1521 -NFRPSVRPVPLEVHIQGFP---GQHYCPRMARMNKPAFQAIRSHSPAKPVLIFVSSRRQ 1576
Query: 181 VEHTCTILRQEMSIQTSP------EVREIVDKCMSNMMDNKLK 217
T L ++ + P + RE+ D + + D+ LK
Sbjct: 1577 TRLTSLDLIAFLATEDDPKQWLKMDEREMND-IIGTVRDSNLK 1618
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 616 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 672
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G T + Q M ++++ Q ++F
Sbjct: 673 NPYIGLFYFDSRFRPVPLGQTFIGIKT--TNKVQQLNHMDEVCYENVLKQIMAGHQVMVF 730
Query: 175 CATRKGVEHTCTILRQE 191
R T LR++
Sbjct: 731 VHARNATVRTAMALREK 747
Score = 92 (37.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 14 DKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
+K + + +L+++ HHAGM +DR+++E LF +G++ +LV
Sbjct: 769 EKQVQRSRNKQLRELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLV 816
Score = 49 (22.3 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 19 NIMDNKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
N+ +K+KDM + IG+ HH + + + + Q+
Sbjct: 1154 NLTVDKMKDMRKDEIGHMLHHVKIGLKVKQCVHQI 1188
>TAIR|locus:2037375 [details] [associations]
symbol:emb1507 "embryo defective 1507" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
Genevestigator:Q9SYP1 Uniprot:Q9SYP1
Length = 2171
Score = 162 (62.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 51/148 (34%), Positives = 76/148 (51%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSAT 101
DRT QL R L+I+ +HLL ++RGPVLE++V R T+++ + + IR V +SAT
Sbjct: 626 DRTYT-QLVR---LLIIDEIHLL-HDNRGPVLESIVAR--TLRQIETTKENIRLVGLSAT 678
Query: 102 IPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSI 161
+PN D+AL+L + D S+RPV L + G K FQ L Y+
Sbjct: 679 LPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQK--- 735
Query: 162 IMQYSDNKPTLIFCATRKGVEHTCTILR 189
++ + LIF +RK T +R
Sbjct: 736 VLAGAGKHQVLIFVHSRKETSKTARAIR 763
Score = 152 (58.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 43 EDRTIIEQLFRSGYLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATI 102
+ R ++Q+ S +++ +HL+G + GPVLE +V RMR + S + IR VA+S ++
Sbjct: 1465 KQRKYVQQV--SLFIVDELHLIGGQ-HGPVLEVIVSRMRYI--SSQVINKIRIVALSTSL 1519
Query: 103 PNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSII 162
N D+ W+G ++ RPV L ++G ++ Q +Y + I
Sbjct: 1520 ANAKDLGEWIGASSHGLF-NFPPGVRPVPLEIHIQGVDISSFEARMQAMTKPTY---TAI 1575
Query: 163 MQYSDNK-PTLIFCATRKGVEHTCTILR--QEMSIQTSPE 199
+Q++ NK P ++F TRK V T L M SP+
Sbjct: 1576 VQHAKNKKPAIVFVPTRKHVRLTAVDLMAYSHMDNPQSPD 1615
Score = 98 (39.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 10 REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
R+++ + ++ LKD+L HHAG+S DR I+E LF G++ +LV
Sbjct: 783 RDVLHSHEDIVKNSDLKDILPYGFAIHHAGLSRGDREIVETLFSQGHVQVLV 834
Score = 38 (18.4 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 30 RSSIGYHHAGMSPEDRTIIEQL 51
R+ I G+ PE I+EQL
Sbjct: 356 RNRIEEEMRGLGPELTAIVEQL 377
>DICTYBASE|DDB_G0290389 [details] [associations]
symbol:ascc3 "activating signal cointegrator 1
complex subunit" species:44689 "Dictyostelium discoideum"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
ProtClustDB:CLSZ2429672 Uniprot:Q54G57
Length = 2195
Score = 157 (60.3 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 44/144 (30%), Positives = 71/144 (49%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+I+ +HL+GE RGP+LE +V RM+ + K + IR V +S + N D++ W+G
Sbjct: 1449 LLIIDEIHLIGE-LRGPILEVIVSRMKLISKQTGVN--IRVVGLSTAMANAIDLSEWMGI 1505
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
+ ++ S RPV + ++GF K Q S+ + I YS KP LIF
Sbjct: 1506 DRVGLF-NFRPSCRPVPIEVHIQGFQGKNYCPRMQTMNKPSF---AAIATYSPKKPVLIF 1561
Query: 175 CATRKGVEHTCTILRQEMSIQTSP 198
++R+ T L + + P
Sbjct: 1562 VSSRRQTRLTALDLISYLVVDNDP 1585
Score = 134 (52.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLL EE RGPVLE +V R T+++ + + IR V +SAT+PN D+A ++ +
Sbjct: 619 IHLLHEE-RGPVLECIVAR--TLRQVETTQEMIRIVGLSATLPNYKDVARFIRAPASGTH 675
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEM-MLSYKLKSIIMQYSDNKPTLIFCATRK 179
D S+RPV LT+ G + M L Y+ + + +IF +RK
Sbjct: 676 F-FDSSYRPVPLTQNFIGVKDNQGIMVMKNNMNQLCYE--RLEKSLKEGHQVMIFVHSRK 732
Query: 180 GVEHTCTIL 188
+ IL
Sbjct: 733 DTVKSAEIL 741
Score = 81 (33.6 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 15 KCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
K + +++ + + I HHAG+ DR ++E+ F +G + +LV
Sbjct: 763 KEFEKVKSKEIRSLFQHGISVHHAGLLRSDRNVVEKYFANGTIKVLV 809
>FB|FBgn0263599 [details] [associations]
symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
GermOnline:CG5931 Uniprot:Q9VUV9
Length = 2142
Score = 164 (62.8 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 50/154 (32%), Positives = 82/154 (53%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSAT 101
+RT + L R L+I+ +HLL +E RGPVLEA+V R T++ + + +R V +SAT
Sbjct: 602 ERTFVS-LVR---LVIIDEIHLLHDE-RGPVLEALVAR--TIRNIETTQEEVRLVGLSAT 654
Query: 102 IPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSI 161
+PN D+A +L D+S+RPV L + G K + FQ + Y+ K+
Sbjct: 655 LPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYE-KT- 712
Query: 162 IMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
M+++ L+F +RK T +R +M ++
Sbjct: 713 -MEHAGRNQVLVFVHSRKETGKTARAVR-DMCLE 744
Score = 151 (58.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 39/119 (32%), Positives = 65/119 (54%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+ L+G E GPVLE V RMR + S + + IR VA+SA++ + D+A WLG P
Sbjct: 1455 LQLVGGEE-GPVLEIVCSRMRYI--SSQIEKQIRIVALSASLTDARDVAQWLGCN-PNAT 1510
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
S RP+ L ++G+ + + +S + + I++YS +KP ++F ++RK
Sbjct: 1511 FNFHPSVRPIPLELHIQGYNVTHNATRIA---TMSKPVYNAILKYSAHKPVIVFVSSRK 1566
Score = 93 (37.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 11 EIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
E++ + + +LK++L HHAGM+ DRT++E LF ++ +LV
Sbjct: 760 EVLRTEAEQVKNTELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLV 810
>CGD|CAL0003134 [details] [associations]
symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
KEGG:cal:CaO19.3980 Uniprot:Q5AK41
Length = 1929
Score = 186 (70.5 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 5 TSPEVREIVDKCMSNIMDNKLKDMLRSSIG-YHHAGMSPEDRTIIEQLFRSGYLMILVHL 63
TS + E+ + I + K D++ ++ + + + R ++Q+ S +M +HL
Sbjct: 1187 TSHRLVELTGDSLPTIQEVKEADIIITTPEKFDGISRNWQTRKFVQQV--SLVIMDEIHL 1244
Query: 64 LGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVYAQI 123
L + RGP+LE +V RM + S + +PIR + +S + N +D+A WLG K ++
Sbjct: 1245 LASD-RGPILEMIVSRMNYI--SSQTKKPIRLLGMSTAVSNAFDMAGWLGV-KNGLF-NF 1299
Query: 124 DDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKGVEH 183
S RPV L + GFP + M + I Q+S NKP LIF A+R+
Sbjct: 1300 PQSVRPVPLQMYIDGFPENLAFCPLMKTM--NKPAFMAIKQHSPNKPVLIFVASRRQTRL 1357
Query: 184 TCTILRQEMSIQTSPE-VREIVDKCMSNMMDN 214
T L ++++P +I D + ++++N
Sbjct: 1358 TALDLIHLCGMESNPRRFLKISDDELQDILEN 1389
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 47/138 (34%), Positives = 71/138 (51%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+I+ VHLL E+ RG V+E +V R T+++ + IR V +SAT+PN D+A +LG
Sbjct: 394 LLIIDEVHLLHED-RGSVIETLVAR--TLRQVESTQSMIRVVGLSATLPNYMDVADFLGV 450
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEM-MLSY-KLKSIIMQYSDNKPTL 172
+ D SFRPV L + + G K + + +SY KL I Q +
Sbjct: 451 NRSVGMFYFDQSFRPVPLQQQILGVRGKAGSKLARENIDKVSYEKLADYINQ---GLQVM 507
Query: 173 IFCATRKGVEHTC-TILR 189
+F +RK +T T +R
Sbjct: 508 VFVHSRKDTVNTARTFIR 525
>DICTYBASE|DDB_G0270042 [details] [associations]
symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
Length = 2237
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 61 VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTV 119
+HLL +E RGPVLE +V R +R ++ +Q Q +R V +SAT+PN D+A +L V
Sbjct: 689 IHLLHDE-RGPVLECIVARTLRMIESTQ---QMVRLVGLSATLPNYEDVATFLRVEPDGV 744
Query: 120 YAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ D S+RP+ L + G + + Q + + + D++ LIF +R+
Sbjct: 745 F-YFDSSYRPIPLEQQYIGISDRGIK---QLQRCNDITFTKVSERVGDHQ-ILIFVHSRR 799
Query: 180 GVEHTCTILR----QEMSIQT---SPEVREIVDKCMSNMMDN-KLK 217
T LR ++ SI P REI+ S + N +LK
Sbjct: 800 ETAKTGKDLRDRAVEDQSIDRYIRDPASREILRATASKQIQNAELK 845
Score = 135 (52.6 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HL+G E GP +E VV RMR + S + +R +A+S++I N D+ LW+G T Y
Sbjct: 1528 LHLIGGEY-GPTMEIVVSRMRYI--STQTGNALRVIALSSSIANARDLVLWIGATPQTCY 1584
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ RP+ + ++GF P F M+ K + + N+ +++F TRK
Sbjct: 1585 -NFHPNVRPIPVEYQIQGFEF-PH---FNARMLAMTKPTVYEVAKNKNQQSIVFVPTRK 1638
Score = 110 (43.8 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 7 PEVREIVDKCMSNIMDN-KLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
P REI+ S + N +LKD+L IG HHAG+S DR+++E LF + +L+
Sbjct: 825 PASREILRATASKQIQNAELKDLLPYGIGIHHAGLSRSDRSLVEDLFGDNRIQVLI 880
>ASPGD|ASPL0000044033 [details] [associations]
symbol:AN2482 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
Uniprot:Q5BAE8
Length = 2015
Score = 151 (58.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 49/155 (31%), Positives = 72/155 (46%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLG + RGP+LE +V RM + + S +R + +S N D+A WLG K +Y
Sbjct: 1261 IHLLGGD-RGPILEIIVSRMNYIASQSKGS--VRLMGMSTACANASDLANWLGV-KEGLY 1316
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSI--IMQYSDNKPTLIFCATR 178
S RPV L + GFP Q F +M S + I +S KP ++F A+R
Sbjct: 1317 -NFRHSVRPVPLEIYIDGFP---EQRGF-CPLMQSMNRPTFLAIKNHSPEKPVIVFVASR 1371
Query: 179 KGVEHTCTILRQEMSIQTSPE--VREIVDKCMSNM 211
+ T L ++ +P VR D N+
Sbjct: 1372 RQTRLTAKDLINFCGMEDNPRRFVRMSEDDLQLNL 1406
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/155 (32%), Positives = 80/155 (51%)
Query: 50 QLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSATIPNIY 106
+L + L+I+ VH+L +E RG V+E++V R R V+ +Q IR V +SAT+PN
Sbjct: 419 ELVQKVRLLIIDEVHMLHDE-RGAVIESLVARTQRQVESTQSL---IRIVGLSATLPNYV 474
Query: 107 DIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPS--QSTFQFEMMLSYKLKSIIMQ 164
D+A +L K D SFRPV L + G KP QS + + K++ ++ +
Sbjct: 475 DVADFLKVNKMAGLFFFDSSFRPVPLEQHFIGVKGKPGSKQSRDNIDTVTFEKVRDMLER 534
Query: 165 YSDNKPTLIFCATRKGVEHTCTILRQEMSIQTSPE 199
++F +RK T +L+Q M++Q E
Sbjct: 535 ---GHQVMVFVHSRKDTVLTARMLKQ-MAVQDGCE 565
Score = 76 (31.8 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 17 MSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIE 49
M + +L+D+ S G HHAGMS DR ++E
Sbjct: 583 MKHARARELRDLFASGFGTHHAGMSRSDRNLME 615
>POMBASE|SPBC13G1.10c [details] [associations]
symbol:mug81 "ATP-dependent RNA helicase Slh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
cytoplasmic translation" evidence=ISS] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
Length = 1935
Score = 141 (54.7 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 48/168 (28%), Positives = 80/168 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL +HLLG + RGPVLE +V RM V + + ++ +R + +S + N D+A WL
Sbjct: 1257 LIILDEIHLLGSD-RGPVLEMIVSRMNYV--ASQTNKKVRVLGLSTAVANANDLANWLNI 1313
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
+ ++ S RPV L + GFP + M ++ I +S +P LIF
Sbjct: 1314 -RDGLF-NFRHSVRPVPLEIYIDGFPGRAYCPRM---MSMNKPAFQAIKTHSPTQPVLIF 1368
Query: 175 CATRKGVEHTCTILRQEMSIQTSPEV-----REIVDKCMSNMMDNKLK 217
++R+ T L ++ +P E ++ +S + D LK
Sbjct: 1369 VSSRRQTRLTAKDLIAFCGLEDNPRRFLYMDEEELEMIVSEVEDKSLK 1416
Score = 126 (49.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 50 QLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSATIPNIY 106
QL L+I+ VH+L +E RG V+E++V R R V+ SQ Q IR V +SAT+PN
Sbjct: 410 QLAEKVRLVIIDEVHMLHDE-RGAVIESLVARTQRLVETSQ---QMIRIVGLSATLPNYL 465
Query: 107 DIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYS 166
D+A +LG + +FRP + + G P + K+ +I +
Sbjct: 466 DVADFLGVNRYKGLFYFSSAFRPCPIEQHFIGAKGSPKIVNSNIDEACFDKVLKLIQE-- 523
Query: 167 DNKPTLIFCATRKGVEHTCTILRQE 191
+IF +RK ++ LR++
Sbjct: 524 -GHQVMIFVHSRKETINSAKKLREQ 547
Score = 89 (36.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 8 EVREIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
E + + +S + +LK++ + S+G H+AGM DR + E+LF G L IL
Sbjct: 563 EKYSLAQRDVSKSKNKELKELFKYSMGIHNAGMLRSDRHLTERLFSMGILKIL 615
>UNIPROTKB|F1SU44 [details] [associations]
symbol:F1SU44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
Ensembl:ENSSSCT00000008903 OMA:NETIATY Uniprot:F1SU44
Length = 1027
Score = 168 (64.2 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 52/155 (33%), Positives = 83/155 (53%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSA 100
+RT QL R L+IL +HLL ++ RGPVLEA+V R +R ++ +Q + +R + +SA
Sbjct: 602 ERTYT-QLVR---LIILDEIHLLHDD-RGPVLEALVARAIRNIEMTQ---EDVRLIGLSA 653
Query: 101 TIPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKS 160
T+PN D+A +L D+SFRPV L + G K + FQ + Y+
Sbjct: 654 TLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEK-- 711
Query: 161 IIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
IM+++ L+F +RK T +R +M ++
Sbjct: 712 -IMEHAGKNQVLVFVHSRKETGKTARAIR-DMCLE 744
>UNIPROTKB|H9L1I7 [details] [associations]
symbol:SNRNP200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
GO:GO:0008026 EMBL:AADN02044729 EMBL:AADN02044730
Ensembl:ENSGALT00000035545 OMA:PRKERIM Uniprot:H9L1I7
Length = 771
Score = 166 (63.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 52/155 (33%), Positives = 83/155 (53%)
Query: 44 DRTIIEQLFRSGYLMIL--VHLLGEESRGPVLEAVVCR-MRTVQKSQRASQPIRFVAVSA 100
+RT QL R L+IL +HLL ++ RGPVLE++V R +R ++ +Q + +R V +SA
Sbjct: 602 ERTYT-QLVR---LVILDEIHLLHDD-RGPVLESLVARAIRNIEMTQ---EDVRLVGLSA 653
Query: 101 TIPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKS 160
T+PN D+A +L D+SFRPV L + G K + FQ + Y+
Sbjct: 654 TLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEK-- 711
Query: 161 IIMQYSDNKPTLIFCATRKGVEHTCTILRQEMSIQ 195
IM+++ L+F +RK T +R +M ++
Sbjct: 712 -IMEHAGKNQVLVFVHSRKETGKTARAIR-DMCLE 744
>ASPGD|ASPL0000051297 [details] [associations]
symbol:AN10194 species:162425 "Emericella nidulans"
[GO:0000393 "spliceosomal conformational changes to generate
catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
Length = 2208
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLL +E RGPV+E++V R T+++ ++ +R V +SAT+PN D+A +L
Sbjct: 670 IHLLHDE-RGPVIESIVSR--TIRQVEQTGDAVRIVGLSATLPNYRDVASFLRVDPAKGL 726
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNK-PTLIFCATRK 179
D S+RP L + G K + Q ++M +I N+ LIF +RK
Sbjct: 727 FHFDGSYRPCPLKQEFIGVTDK--KPIKQLKIMNDICYNKVIEHVGQNRNQMLIFVHSRK 784
Query: 180 GVEHTCTILRQE-MSIQTSPEV 200
T LR + + ++T ++
Sbjct: 785 ETAKTAKYLRDKALEMETIGQI 806
Score = 129 (50.5 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 43/134 (32%), Positives = 59/134 (44%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+H+LG G V E VV RM ++ + + +R V +S + N DI W+G K T+Y
Sbjct: 1513 LHMLGGYG-GYVYEVVVSRMHSI--ALQTESGMRIVGLSVPLSNARDIGEWIGASKHTIY 1569
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
RPV L ++ F P + M L I+Q S +KP LIF RK
Sbjct: 1570 -NFSPHARPVPLELHIQSFSI-PHFPSLMLAMARPAYLS--ILQLSADKPALIFVPNRKQ 1625
Query: 181 VEHTCTILRQEMSI 194
T L SI
Sbjct: 1626 TRATAIDLLTACSI 1639
Score = 98 (39.6 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 10 REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
R I+ + ++ D LKD+L G HHAG+S DR ++ LF+ G + +LV
Sbjct: 814 RAILAEEAESVNDAALKDILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLV 865
>UNIPROTKB|I3LAA7 [details] [associations]
symbol:I3LAA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00700000104562 GO:GO:0008026
Ensembl:ENSSSCT00000023674 OMA:ENDQDET Uniprot:I3LAA7
Length = 268
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/139 (31%), Positives = 67/139 (48%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLGEE RGPVLE +V R + S +P+R V +S + N D+A WL + ++
Sbjct: 67 IHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTALANARDLADWLNIRQMGLF 123
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L ++GFP Q ++ I +S KP LIF ++R+
Sbjct: 124 -NFRPSVRPVPLEVHIQGFP---GQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQ 179
Query: 181 VEHTCTILRQEMSIQTSPE 199
T L ++ + P+
Sbjct: 180 TRLTALELIAFLATEEDPK 198
>CGD|CAL0001532 [details] [associations]
symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000388 "spliceosome conformational change to
release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
Uniprot:Q5A0Z8
Length = 1987
Score = 164 (62.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/165 (31%), Positives = 83/165 (50%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
LMI+ +HLL +E RGPVLE++V R ++KS+ IR V +SAT+PN D+A ++
Sbjct: 502 LMIIDEIHLLHDE-RGPVLESLVSR--AIRKSETTGSDIRIVGLSATLPNYADVAKFIR- 557
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
KP D S+RP L ++ G K ++ + M + D +IF
Sbjct: 558 AKPEGLFYFDASYRPCPLEQVYIG--VKEQKAIKRIAAMNEACYDRMHQSLQDRHQLIIF 615
Query: 175 CATRKGVEHTCTILRQEMSIQTSPE--VREIVDKCMSNMMDNKLK 217
+RK T L +++ I + V+EI+ + +M + KLK
Sbjct: 616 VHSRKETFTTAKYLMEKLDIDIVEQEGVKEILKQEGESMSNPKLK 660
>UNIPROTKB|G4N5J1 [details] [associations]
symbol:MGG_06124 "Activating signal cointegrator 1 complex
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
KEGG:mgr:MGG_06124 Uniprot:G4N5J1
Length = 1998
Score = 127 (49.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 39/138 (28%), Positives = 61/138 (44%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLL + RGP+LE +V RM + S + S +R + +S N D+ WLG K ++
Sbjct: 1282 IHLLAGD-RGPILEIIVSRMNYIAASTKNS--VRLLGMSTACANATDLGNWLGV-KEGLF 1337
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
S RPV L + GFP M L + +S KP ++F +R+
Sbjct: 1338 -NFRHSVRPVPLELYIDGFPEVRGFCPLMQSMNRPTFLA--VKNHSPTKPVIVFVPSRRQ 1394
Query: 181 VEHTCTILRQEMSIQTSP 198
T L ++ +P
Sbjct: 1395 TRLTAKDLINMCGMEDNP 1412
Score = 127 (49.8 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 45/146 (30%), Positives = 76/146 (52%)
Query: 50 QLFRSGYLMIL--VHLLGEESRGPVLEAVVCRM-RTVQKSQRASQPIRFVAVSATIPNIY 106
+L + L+I+ VH+L +E RG VLE++V R R V+ +Q IR V +SAT+PN
Sbjct: 425 ELVQKVRLLIIDEVHMLHDE-RGAVLESLVARTERQVESTQSL---IRIVGLSATLPNFI 480
Query: 107 DIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPS--QSTFQFEMMLSYKLKSIIMQ 164
D+A +L + D SFRPV L + G K QS + + K++ ++ +
Sbjct: 481 DVADFLKVNRMQGLFYFDASFRPVPLEQHFIGVKGKAGTKQSRENLDEVAFDKVREMLEK 540
Query: 165 YSDNKPTLIFCATRKGVEHTCTILRQ 190
D++ ++F +R+ T +L +
Sbjct: 541 --DHQ-VMVFVHSRRDTLQTAKMLHE 563
Score = 95 (38.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 17 MSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
M +L+D++ +G HHAGM+ DR ++E+LF G L +L
Sbjct: 589 MKTCKARELRDLVPKGMGIHHAGMTRSDRNLMERLFAEGVLKVL 632
>WB|WBGene00012896 [details] [associations]
symbol:snrp-200 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 160 (61.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 45/135 (33%), Positives = 73/135 (54%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+I+ +HLL ++ RGPVLE++V +RT+++ ++ R V +SAT+PN D+A +L
Sbjct: 605 LLIIDEIHLLHDD-RGPVLESIV--VRTIRQMEQNHDECRLVGLSATLPNYQDVATFLRV 661
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
KP D+S+RPV L + G K + FQ + Y IM+++ L+F
Sbjct: 662 -KPEHLHFFDNSYRPVPLEQQYIGVTEKKALKRFQAMNEVVYDK---IMEHAGKSQVLVF 717
Query: 175 CATRKGVEHTCTILR 189
+RK T +R
Sbjct: 718 VHSRKETAKTAKAIR 732
Score = 111 (44.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+H++G S G V E V R R + S + +R VA+S+++ N D+ +WLG +
Sbjct: 1450 LHMIGA-SNGAVFEVVCSRTRYI--SSQLESAVRVVALSSSLTNARDLGMWLGCSASATF 1506
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
S RPV L ++ F + S F Y+ + KP L+F R+
Sbjct: 1507 -NFMPSTRPVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRR 1564
Score = 88 (36.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 25 LKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
LKD+L HHAGM+ DRT++E LF ++ +L
Sbjct: 767 LKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVL 802
>UNIPROTKB|Q9U2G0 [details] [associations]
symbol:Y46G5A.4 "Putative U5 small nuclear
ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
Length = 2145
Score = 160 (61.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 45/135 (33%), Positives = 73/135 (54%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+I+ +HLL ++ RGPVLE++V +RT+++ ++ R V +SAT+PN D+A +L
Sbjct: 605 LLIIDEIHLLHDD-RGPVLESIV--VRTIRQMEQNHDECRLVGLSATLPNYQDVATFLRV 661
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
KP D+S+RPV L + G K + FQ + Y IM+++ L+F
Sbjct: 662 -KPEHLHFFDNSYRPVPLEQQYIGVTEKKALKRFQAMNEVVYDK---IMEHAGKSQVLVF 717
Query: 175 CATRKGVEHTCTILR 189
+RK T +R
Sbjct: 718 VHSRKETAKTAKAIR 732
Score = 111 (44.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 33/119 (27%), Positives = 53/119 (44%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+H++G S G V E V R R + S + +R VA+S+++ N D+ +WLG +
Sbjct: 1450 LHMIGA-SNGAVFEVVCSRTRYI--SSQLESAVRVVALSSSLTNARDLGMWLGCSASATF 1506
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
S RPV L ++ F + S F Y+ + KP L+F R+
Sbjct: 1507 -NFMPSTRPVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGKLEPKPALVFVPVRR 1564
Score = 88 (36.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 25 LKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
LKD+L HHAGM+ DRT++E LF ++ +L
Sbjct: 767 LKDLLPYGFAIHHAGMNRVDRTLVEDLFADRHIQVL 802
>UNIPROTKB|I3LVA7 [details] [associations]
symbol:I3LVA7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GeneTree:ENSGT00700000104562 GO:GO:0008026 EMBL:CU468078
Ensembl:ENSSSCT00000024341 Uniprot:I3LVA7
Length = 119
Score = 126 (49.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 28 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 84
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRG 138
D FRPV L + G
Sbjct: 85 NPCIGLFYFDGRFRPVPLGQTFLG 108
>RGD|1307995 [details] [associations]
symbol:Ascc3 "activating signal cointegrator 1 complex subunit
3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
Length = 2197
Score = 141 (54.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 43 EDRTIIEQLFRSGYLMI-LVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSAT 101
++R+ ++Q+ L+I +HLLGEE RGPVLE +V R + S +P+R V +S
Sbjct: 1440 QNRSYVQQV---NILIIDEIHLLGEE-RGPVLEVIVSRTNFI--SSHTEKPVRIVGLSTA 1493
Query: 102 IPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFP 140
+ N D+A WL + ++ S RPV L ++GFP
Sbjct: 1494 LANARDLADWLNIKQMGLF-NFRPSVRPVPLEVHIQGFP 1531
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+IL VHLL E+ RGPVLE++V R T+++ + IR + +SAT+PN D+A +L
Sbjct: 608 LLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSMIRILGLSATLPNYLDVATFLHV 664
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
D FRPV L + G K + Q M +S++ Q ++F
Sbjct: 665 NPYIGLFYFDGRFRPVPLGQTFLGI--KSANKMQQLNNMDEVCYESVLKQVKAGHQVMVF 722
Query: 175 CATRKGVEHTCTIL 188
R T L
Sbjct: 723 VHARNATVRTAMSL 736
Score = 53 (23.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 19 NIMDNKLKDMLRSSIGY--HHAGMSPEDRTIIEQL 51
N+ +KLKDM + IG+ HH + + + + Q+
Sbjct: 1146 NLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQI 1180
>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
symbol:PF14_0370 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 125 (49.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLG+E+RG V+E +V R + +Q ++ IR + ++ I ++ D+ LWL K
Sbjct: 1499 IHLLGQENRGGVIEILVNRFKNMQNE--LNKKIRLIGLTTVITSVDDLILWLDV-KENYL 1555
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
S R V + GF K + +++ + I QY+ K LIF ++R+
Sbjct: 1556 FNFPSSCRIVPCKTHILGFTQKAYCNRMS---VMNKNVFDAINQYAQTKNVLIFVSSRR 1611
Score = 67 (28.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 2 SIQTSPEVREIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
++ T ++++ + K +N+ +K HHAGMS D+ ++E LF+ +L
Sbjct: 729 NVYTDNDIKKKIKKS-NNLY---IKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVL 783
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 10 REIVDKCMSNIMDNKL 25
++I+ K + N+ +NKL
Sbjct: 925 KDIIMKAIQNLSENKL 940
>UNIPROTKB|Q8IL78 [details] [associations]
symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
Length = 2472
Score = 125 (49.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
+HLLG+E+RG V+E +V R + +Q ++ IR + ++ I ++ D+ LWL K
Sbjct: 1499 IHLLGQENRGGVIEILVNRFKNMQNE--LNKKIRLIGLTTVITSVDDLILWLDV-KENYL 1555
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
S R V + GF K + +++ + I QY+ K LIF ++R+
Sbjct: 1556 FNFPSSCRIVPCKTHILGFTQKAYCNRMS---VMNKNVFDAINQYAQTKNVLIFVSSRR 1611
Score = 67 (28.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 2 SIQTSPEVREIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMIL 60
++ T ++++ + K +N+ +K HHAGMS D+ ++E LF+ +L
Sbjct: 729 NVYTDNDIKKKIKKS-NNLY---IKQFYEYGCTIHHAGMSRSDKILVESLFKKKVFNVL 783
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 10 REIVDKCMSNIMDNKL 25
++I+ K + N+ +NKL
Sbjct: 925 KDIIMKAIQNLSENKL 940
>POMBASE|SPAC9.03c [details] [associations]
symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
conformational changes to generate catalytic conformation"
evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
Uniprot:Q9UT24
Length = 2176
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 61 VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVY 120
VHLL +E RGPVLE++V R+ + + + +R V +SAT+PN D+A +L
Sbjct: 656 VHLLHDE-RGPVLESIVARI--FRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGL 712
Query: 121 AQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRKG 180
D ++RP L + G K Q Y+ +MQ++ LIF +RK
Sbjct: 713 FYFDSTYRPCPLKQEFIGITEKTPFKRMQTTNEACYEK---VMQHAGKNQVLIFVHSRKE 769
Query: 181 VEHTCTILRQE 191
T +R +
Sbjct: 770 TAKTARFIRDK 780
Score = 99 (39.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 10 REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
REI+ + D LKD+L HHAGM EDR E LF G + +LV
Sbjct: 798 REILRAEADSTSDENLKDLLPYGFAIHHAGMRREDRQTSEDLFADGTIQVLV 849
Score = 92 (37.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/125 (28%), Positives = 56/125 (44%)
Query: 56 YLMILVHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGFG 115
Y+ + LLG GP+ E V+ R+R + + + + IR V +S ++ N D+ WLG
Sbjct: 1489 YICDELQLLGG-FYGPLYEIVISRIRYM--AVQLEKNIRVVGLSVSVANARDLGEWLGTS 1545
Query: 116 KPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYK-LKSIIMQYSDNKPTLIF 174
++ RP LT ++ F S Y+ LK+ I Q K T++F
Sbjct: 1546 PQCIF-NFSPKDRPNPLTIHLQSFSITHFPSLMLAMSKPIYRSLKNFISQ---RKSTIVF 1601
Query: 175 CATRK 179
RK
Sbjct: 1602 TPDRK 1606
>SGD|S000000974 [details] [associations]
symbol:BRR2 "RNA-dependent ATPase RNA helicase (DEIH box)"
species:4932 "Saccharomyces cerevisiae" [GO:0005682 "U5 snRNP"
evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000388 "spliceosome
conformational change to release U4 (or U4atac) and U1 (or U11)"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 SGD:S000000974
GO:GO:0005524 GO:GO:0005681 GO:GO:0005682 GO:GO:0003676
EMBL:BK006939 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104562 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
EMBL:U18922 KO:K12854 OrthoDB:EOG4MD17F GO:GO:0046540 GO:GO:0004004
PIR:S50675 RefSeq:NP_011099.1 PDB:3HIB PDB:3IM1 PDB:3IM2
PDBsum:3HIB PDBsum:3IM1 PDBsum:3IM2 ProteinModelPortal:P32639
SMR:P32639 DIP:DIP-850N IntAct:P32639 MINT:MINT-606933
STRING:P32639 PaxDb:P32639 EnsemblFungi:YER172C GeneID:856919
KEGG:sce:YER172C CYGD:YER172c OMA:RDTHESS EvolutionaryTrace:P32639
NextBio:983377 Genevestigator:P32639 GermOnline:YER172C
GO:GO:0000388 Uniprot:P32639
Length = 2163
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
L+I+ +HLL ++ RGPVLE++V R T S+ + R + +SAT+PN D+ +L
Sbjct: 630 LLIIDEIHLLHDD-RGPVLESIVAR--TFWASKYGQEYPRIIGLSATLPNYEDVGRFLRV 686
Query: 115 GKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLIF 174
K ++ D SFRP L++ G K S + + M + ++ ++ ++F
Sbjct: 687 PKEGLF-YFDSSFRPCPLSQQFCGI--KERNSLKKLKAMNDACYEKVLESINEGNQIIVF 743
Query: 175 CATRKGVEHTCTILRQEMS 193
+RK T T L+ + +
Sbjct: 744 VHSRKETSRTATWLKNKFA 762
Score = 112 (44.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 10 REIVDKCMSNIMDNKLKDMLRSSIGYHHAGMSPEDRTIIEQLFRSGYLMILV 61
++I+ +N++D L+ ++ S IG HHAG++ DR++ E LF G L +LV
Sbjct: 778 KQILKTEAANVLDPSLRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLV 829
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/126 (23%), Positives = 53/126 (42%)
Query: 57 LMIL--VHLLGEESRGPVLEAVVCRMRTVQKSQRASQPIRFVAVSATIPNIYDIALWLGF 114
LMI H + + G V E ++ RM + + + + IRFV +S + N D W G
Sbjct: 1470 LMIYDDAHEISQGVYGAVYETLISRMIFI--ATQLEKKIRFVCLSNCLANARDFGEWAGM 1527
Query: 115 GKPTVYA-QIDDSFRPVKLTKIVRGFPTKPSQSTFQFEMMLSYKLKSIIMQYSDNKPTLI 173
K +Y + P+++ ++ F S F F M L ++ + + +
Sbjct: 1528 TKSNIYNFSPSERIEPLEIN--IQSFKDVEHIS-FNFSM-LQMAFEASAAAAGNRNSSSV 1583
Query: 174 FCATRK 179
F +RK
Sbjct: 1584 FLPSRK 1589
>UNIPROTKB|B4E0P5 [details] [associations]
symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
helicase" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001650
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0030529 GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889
SMART:SM00611 SMART:SM00973 EMBL:AC021188 UniGene:Hs.246112
HGNC:HGNC:30859 ChiTaRS:SNRNP200 EMBL:AK303465 IPI:IPI00927472
SMR:B4E0P5 STRING:B4E0P5 Ensembl:ENST00000429650
HOGENOM:HOG000031250 HOVERGEN:HBG078981 Uniprot:B4E0P5
Length = 595
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 86 SQRASQPIRFVAVSATIPNIYDIALWLGFGKPTVYAQIDDSFRPVKLTKIVRGFPTKPSQ 145
S + +PIR VA+S+++ N D+A WLG + + + RPV L ++GF +Q
Sbjct: 5 SSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF-NFHPNVRPVPLELHIQGFNISHTQ 63
Query: 146 STFQFEMMLSYKLKSIIMQYSDNKPTLIFCATRK 179
+ + ++ + I ++S KP ++F +RK
Sbjct: 64 TRL---LSMAKPVYHAITKHSPKKPVIVFVPSRK 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 217 217 0.00090 112 3 11 22 0.47 32
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 596 (63 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 19.55u 0.10s 19.65t Elapsed: 00:00:06
Total cpu time: 19.56u 0.10s 19.66t Elapsed: 00:00:08
Start: Thu Aug 15 10:53:19 2013 End: Thu Aug 15 10:53:27 2013