Query psy3106
Match_columns 433
No_of_seqs 342 out of 600
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 16:38:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3106.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3106hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hms_A Hepatocyte growth facto 99.1 7.7E-11 2.6E-15 96.5 6.2 80 30-111 12-97 (101)
2 3sp8_A Hepatocyte growth facto 98.5 1.4E-07 4.9E-12 90.1 7.8 77 32-111 14-97 (264)
3 3nk4_A ZONA pellucida 3; ferti 98.3 5.5E-06 1.9E-10 80.9 13.7 156 197-357 76-253 (297)
4 4dur_A Plasminogen, serine pro 98.0 5E-06 1.7E-10 91.5 6.4 75 33-111 4-78 (791)
5 2qj2_A Hepatocyte growth facto 97.7 6.9E-05 2.4E-09 67.7 8.0 77 32-111 14-97 (184)
6 3qw9_A Transforming growth fac 97.0 0.002 6.8E-08 58.0 8.4 86 270-356 26-126 (176)
7 2f83_A Coagulation factor XI; 96.8 0.003 1E-07 67.7 9.4 147 18-174 98-259 (625)
8 2f83_A Coagulation factor XI; 96.7 0.0033 1.1E-07 67.4 9.0 131 39-175 26-170 (625)
9 3hms_A Hepatocyte growth facto 96.7 0.0016 5.3E-08 53.1 4.4 59 121-180 16-81 (101)
10 4a5v_A MIC4, micronemal protei 96.4 0.0046 1.6E-07 54.8 6.4 122 37-176 13-137 (161)
11 2yil_A Microneme antigen L2; s 96.4 0.013 4.4E-07 50.5 8.7 109 49-177 24-134 (138)
12 3sp8_A Hepatocyte growth facto 95.2 0.018 6.3E-07 54.8 5.3 59 121-180 16-81 (264)
13 2ll3_A Micronemal protein 4; c 93.0 0.072 2.5E-06 41.6 3.5 42 45-88 21-62 (82)
14 2qj2_A Hepatocyte growth facto 90.5 0.32 1.1E-05 43.7 5.4 56 121-177 16-78 (184)
15 4dur_A Plasminogen, serine pro 89.7 0.23 7.7E-06 54.6 4.4 57 122-179 6-63 (791)
16 4a5v_A MIC4, micronemal protei 84.8 0.78 2.7E-05 40.3 4.2 58 28-90 79-138 (161)
17 2ll3_A Micronemal protein 4; c 61.1 6.4 0.00022 30.5 3.2 34 140-175 29-62 (82)
18 1hky_A MIC-5, etmic5, micronem 41.6 28 0.00096 25.5 3.8 44 46-93 24-67 (86)
19 2yil_A Microneme antigen L2; s 36.1 14 0.00048 31.3 1.7 37 52-92 100-136 (138)
20 1i8n_A Anti-platelet protein; 29.7 1E+02 0.0036 24.0 5.5 61 33-93 45-106 (126)
No 1
>3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A
Probab=99.11 E-value=7.7e-11 Score=96.47 Aligned_cols=80 Identities=15% Similarity=0.323 Sum_probs=68.6
Q ss_pred CCCeEEEEecCeEEec----ceeeEeecCCHHHHHHHcccCC--CceeeeEEeeCCCCceEeecCCcccccCCCCcccCC
Q psy3106 30 ERAWCFDRVHGYSLLG----FVKKVGTATSRTDCFEMCLGER--DFICRSANYNNATGECHMSDMDRITVAGHGAFEETK 103 (433)
Q Consensus 30 ~~~~~Fer~~g~~L~g----~~~~~~~~~s~~eC~~~C~~e~--~f~CrS~~y~~~~~~C~Ls~~~~~t~~~p~~f~~~~ 103 (433)
+.+-.|+++.|.+|+. ...++..+.|++||+.+|..++ .|.||||.|....+.|+|..+++.+. +.....+.
T Consensus 12 ~~L~~y~kTeg~~L~~~~~~~~~~~~~~~s~eeCA~kC~~~~~~~F~CRAF~y~~k~q~C~ll~~ns~s~--~v~~~~~~ 89 (101)
T 3hms_A 12 NTIHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS--GVKKEFGH 89 (101)
T ss_dssp CCGGGEEEEEEEEEEECCTTCCCEEEECSCHHHHHHHHHHCTTCSSCCCEEEEETTTTEEEEESCCTTST--TEEEEEEE
T ss_pred cHHHHhhhcCCeEEeccCCCccceeeccCCHHHHHHHHHhccCCCcceeeeEEecCCCcEEECCCcCCCc--hheeeccC
Confidence 3456799999999986 5578889999999999999997 89999999999999999999999996 23333378
Q ss_pred CceEEecC
Q psy3106 104 DIEYLENN 111 (433)
Q Consensus 104 ~~dY~En~ 111 (433)
++|+|||-
T Consensus 90 ~~dLYEKK 97 (101)
T 3hms_A 90 EFDLYENK 97 (101)
T ss_dssp EEEEEEEG
T ss_pred ceeeeecc
Confidence 99999974
No 2
>3sp8_A Hepatocyte growth factor alpha chain; kringle domain, Met tyrosine kinase, hormone; HET: MES; 1.86A {Homo sapiens} PDB: 3hn4_A*
Probab=98.53 E-value=1.4e-07 Score=90.10 Aligned_cols=77 Identities=17% Similarity=0.406 Sum_probs=67.4
Q ss_pred CeEEEEecCeEEeccee----eEeecCCHHHHHHHcccCCC--ceeeeEEeeCCCCceEeecCCcccccCCCCccc-CCC
Q psy3106 32 AWCFDRVHGYSLLGFVK----KVGTATSRTDCFEMCLGERD--FICRSANYNNATGECHMSDMDRITVAGHGAFEE-TKD 104 (433)
Q Consensus 32 ~~~Fer~~g~~L~g~~~----~~~~~~s~~eC~~~C~~e~~--f~CrS~~y~~~~~~C~Ls~~~~~t~~~p~~f~~-~~~ 104 (433)
+-.|.++.|++|+...+ ++..+.|++||+.+|..++. |+||||.|...++.|+|..+++.+. ..++. +..
T Consensus 14 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ca~~c~~~~~~~f~craf~~~~~~~~c~~~~~~~~s~---~~~~~~~~~ 90 (264)
T 3sp8_A 14 IHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS---GVKKEFGHE 90 (264)
T ss_dssp GGGEEEETTEEEEESSTTCCCEEEECSCHHHHHHHHHSTTCSSSCCCEEEEETTTTEEEEESCCTTST---TEEEEECTT
T ss_pred hhhhhhccCeEEEeccccccceeeccCCHHHHHHHHhhccCCCccccceeeeccCCeEEEccccCCCC---ceEeecCcc
Confidence 55699999999998777 88899999999999999987 9999999999999999999999996 34443 667
Q ss_pred ceEEecC
Q psy3106 105 IEYLENN 111 (433)
Q Consensus 105 ~dY~En~ 111 (433)
++.||+-
T Consensus 91 ~~l~ekk 97 (264)
T 3sp8_A 91 FDLYENK 97 (264)
T ss_dssp EEEEEEH
T ss_pred EEeeecC
Confidence 8999974
No 3
>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A*
Probab=98.32 E-value=5.5e-06 Score=80.92 Aligned_cols=156 Identities=15% Similarity=0.233 Sum_probs=88.6
Q ss_pred eeEEEeeCC---ceee-eccceeEEEEeecCCCceeeeceeecccccccccccc-ceecCCCcEEEEEEcCCC-Cc-ccc
Q psy3106 197 RNTVIQHHD---TIIT-SSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTE-EVVVDSPNVAMKITDRSG-AD-VKP 269 (433)
Q Consensus 197 ~~vvVq~hp---~~~T-~~Dr~y~v~C~y~~~~~~v~~~~~v~~~~~~~~~~~~-~~~~~~P~c~~~I~~~~g-~~-v~~ 269 (433)
++|+....| .+|| ...-.+.++|.|... ..|.... +. . ....+.. ......-...|+|...+. .+ ...
T Consensus 76 N~l~~~~~~~~~~~ItR~~~~~l~~~C~Y~~~-~~vs~~~-~~--p-~~~~~~~~~~~~g~~~~~m~l~~d~~~~~~~~~ 150 (297)
T 3nk4_A 76 TLINYDPSPASNPVIIRTNPAVIPIECHYPRR-EQVSSNA-IR--P-TWSPFNSALSAEERLVFSLRLMSDDWSTERPFT 150 (297)
T ss_dssp EEEEECCCCCSSTTEESSCCEEEEEEEEEEC--------------C-CBCTTC------CCCCEEEEEECTTSSSBCCSC
T ss_pred EEEEEeccCCCCCceEecccEEEEEEEEEcCC-Ccccccc-Cc--C-cccccccccccccceEEEEEeccCCCcccccCC
Confidence 555554432 2333 345567889999642 2232211 10 0 0000110 011233477899876442 11 113
Q ss_pred eeEeCCeEEEEEEEeCC-CCCccEEEEEEEEEcC---CCCceEEEEcCCCCcccccccC---cceecc-cc--Cc--ccc
Q psy3106 270 SAEVGDPLALRFEILDP-NSPYEIFVRELVAMDG---VDSSEIVLIDSNGCPTDHFIMG---PLYKAA-DT--GK--FLN 337 (433)
Q Consensus 270 ~a~vGd~l~~~w~~~~~-~~~~~~~V~~C~a~dg---~~~~~~~lID~~GC~~d~~l~~---~~~y~~-~~--~~--sl~ 337 (433)
...+||+|++++++... +..+.++|.+|+|... .+..++.||+.+|||.|..+.. .+++.. +. .+ .-.
T Consensus 151 ~~~l~~~lyvev~v~~~~~~~l~l~l~~C~ATps~~~~~~~~y~lI~~~GC~~d~~~~~~~s~~~~~~~~~~~~rF~~~~ 230 (297)
T 3nk4_A 151 GFQLGDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITPRPREDVLRFRIDV 230 (297)
T ss_dssp CBCTTCEEEEEEEECCTTBCCEEEEEEEEEEESSSCTTSSSEEEEEBTTTEEGGGGSTTCCCEECSSCSSTTEEEEEEEC
T ss_pred cccCCCEEEEEEEEecCCCCCEEEEEeeEEEeCCCCccCCceEEEEccCCCCcCCccccceeEEecCCCCCceEEEEEEe
Confidence 45899999999998544 4689999999999853 3456889998899999987652 333211 11 11 234
Q ss_pred cccCC--cceeEEE-eccCCcCC
Q psy3106 338 CPHEG--KCTLTMS-KVSSCPRS 357 (433)
Q Consensus 338 ~~F~~--~s~l~~~-~v~~C~~s 357 (433)
|+|.+ .+.+|++ .+..|...
T Consensus 231 F~F~~~~~~~vylhC~v~vC~~~ 253 (297)
T 3nk4_A 231 FRFAGDNRNLIYITCHLKVTPAD 253 (297)
T ss_dssp CEETTCSSCEEEEEEEEEEEETT
T ss_pred EeccCCCCCeEEEEEEEEEECCC
Confidence 57766 6789997 77777653
No 4
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=98.01 E-value=5e-06 Score=91.53 Aligned_cols=75 Identities=23% Similarity=0.395 Sum_probs=66.1
Q ss_pred eEEEEecCeEEecceeeEeecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecCCcccccCCCCcccCCCceEEecC
Q psy3106 33 WCFDRVHGYSLLGFVKKVGTATSRTDCFEMCLGERDFICRSANYNNATGECHMSDMDRITVAGHGAFEETKDIEYLENN 111 (433)
Q Consensus 33 ~~Fer~~g~~L~g~~~~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~~~~t~~~p~~f~~~~~~dY~En~ 111 (433)
-.|.++.|..|....++...+.|++||+++|..++.|.||||.|..+.+.|+|..+++.+. ..++. .+++.||+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ca~~c~~~~~~~cr~f~~~~~~~~c~~~~~~~~~~---~~~~~-~~~~l~~~~ 78 (791)
T 4dur_A 4 DDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFTCRAFQYHSKEQQCVIMAENRKSS---IIIRM-RDVVLFEKK 78 (791)
T ss_dssp TTEEEEEEEEECCSSEEEEECSSHHHHHHHHHHCSSSCCCEEEEETTTTEEEEESCCTTTS---CEEEE-EEEEEEEEG
T ss_pred hhhhhcCCeEEeccChhhcccCCHHHHHHHhhccCCcceeeeeeeccCCceEECCCcCCCc---hhhcc-ccccchhcc
Confidence 4589999999998889999999999999999999999999999999999999999999986 34443 358889863
No 5
>2qj2_A Hepatocyte growth factor; HGF/SF, hormone/growth factor; 1.81A {Homo sapiens} SCOP: g.10.1.1 g.14.1.1 PDB: 1nk1_A 3mkp_A* 1gmn_A* 1gmo_A* 1bht_A* 1gp9_A* 2qj4_A
Probab=97.74 E-value=6.9e-05 Score=67.70 Aligned_cols=77 Identities=17% Similarity=0.406 Sum_probs=61.6
Q ss_pred CeEEEEecCeEEec----ceeeEeecCCHHHHHHHcccCC--CceeeeEEeeCCCCceEeecCCcccccCCCCccc-CCC
Q psy3106 32 AWCFDRVHGYSLLG----FVKKVGTATSRTDCFEMCLGER--DFICRSANYNNATGECHMSDMDRITVAGHGAFEE-TKD 104 (433)
Q Consensus 32 ~~~Fer~~g~~L~g----~~~~~~~~~s~~eC~~~C~~e~--~f~CrS~~y~~~~~~C~Ls~~~~~t~~~p~~f~~-~~~ 104 (433)
+-.|.+..|.+|.. ..+++..+.++++|+.+|.+++ .|.||||.|+...+.|.+..++..+. ..... ...
T Consensus 14 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~Ca~~C~~~~~~~~~C~af~y~~~~~~C~~~p~~~~s~---~~~~~~~~~ 90 (184)
T 2qj2_A 14 IHEFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDKARKQCLWFPFNSMSS---GVKKEFGHE 90 (184)
T ss_dssp GGGEEEETTEEEEECSTTCCCEEEECSCHHHHHHHHHTTTTCSSCCCEEEEETTTTEEEEESSCTTST---TEEEEECTT
T ss_pred HHHHhhhcCcEEeccCccccccccccCCHHHHHHHHHhccCCcceeecceEeccCCeEEEcCCcCCCc---hhhhhcCcc
Confidence 55699999999986 6677888999999999999986 79999999999999999988877653 22222 345
Q ss_pred ceEEecC
Q psy3106 105 IEYLENN 111 (433)
Q Consensus 105 ~dY~En~ 111 (433)
.|.||+.
T Consensus 91 ~~~~~~~ 97 (184)
T 2qj2_A 91 FDLYENK 97 (184)
T ss_dssp EEEEEEG
T ss_pred ccccccc
Confidence 5777764
No 6
>3qw9_A Transforming growth factor beta receptor type 3; cytokine receptor, immunoglobulin domain, ZONA pellucida, TG ligand CO-receptor; HET: NAG BMA FUC MAN; 2.00A {Rattus norvegicus}
Probab=97.00 E-value=0.002 Score=58.02 Aligned_cols=86 Identities=12% Similarity=0.147 Sum_probs=56.8
Q ss_pred eeEeCCeEEEEEEEeCCCCCccEEEEEEEEEcC---CCCceEEEEcCCCCcccccccC-cce---ecccc-----Cc-cc
Q psy3106 270 SAEVGDPLALRFEILDPNSPYEIFVRELVAMDG---VDSSEIVLIDSNGCPTDHFIMG-PLY---KAADT-----GK-FL 336 (433)
Q Consensus 270 ~a~vGd~l~~~w~~~~~~~~~~~~V~~C~a~dg---~~~~~~~lID~~GC~~d~~l~~-~~~---y~~~~-----~~-sl 336 (433)
.+.+||+||...+....+..+.++|.+|+|... .+.-++.||. +|||.|..+-- ... ..... .+ ++
T Consensus 26 ~v~l~~~lyvev~l~~~d~~l~l~ld~CwATps~d~~~~~~y~lI~-nGC~~D~t~~~~~~~~v~~~~~ng~s~~~RFsf 104 (176)
T 3qw9_A 26 SVAENEHVYVEVSVTKADQDLGFAIQTCFLSPYSNPDRMSDYTIIE-NICPKDDSVKFYSSKRVHFPIPHAEVDKKRFSF 104 (176)
T ss_dssp EECTTCEEEEEEEEEESCTTEEEEEEEEEEESCSCTTSCCSCEEEE-TTEECSTTCEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred eEecCCEEEEEEEeccCCCceEEEEeeEEeecCCCccCCccEEEEE-CCccCCCCEEEEeccccccccCCCCcceEEEEE
Confidence 568999999999986556789999999999754 2346788996 79999976542 001 00011 11 23
Q ss_pred ccccC-CcceeEEE-eccCCcC
Q psy3106 337 NCPHE-GKCTLTMS-KVSSCPR 356 (433)
Q Consensus 337 ~~~F~-~~s~l~~~-~v~~C~~ 356 (433)
.++|. ..+.+|++ .+..|..
T Consensus 105 ~F~Fv~~~~~VYLHC~v~vC~~ 126 (176)
T 3qw9_A 105 LFKSVFNTSLLFLHCELTLCSR 126 (176)
T ss_dssp ECCCCSSCSEEEEEEEEEEEES
T ss_pred EEEecCCCCeEEEEEeeEEECC
Confidence 55665 46788886 5554443
No 7
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=96.81 E-value=0.003 Score=67.66 Aligned_cols=147 Identities=15% Similarity=0.283 Sum_probs=92.2
Q ss_pred eEEeccCCCC-CCCCCeEEEEecCeEEecceeeEeecCCHHHHHHHcccCCCceeeeEEee-------CCCCceEeecCC
Q psy3106 18 YAQKTCLGVK-PCERAWCFDRVHGYSLLGFVKKVGTATSRTDCFEMCLGERDFICRSANYN-------NATGECHMSDMD 89 (433)
Q Consensus 18 y~~k~Cl~~~-~C~~~~~Fer~~g~~L~g~~~~~~~~~s~~eC~~~C~~e~~f~CrS~~y~-------~~~~~C~Ls~~~ 89 (433)
|..|.|.+.+ .|.. . ...+..+.|.+...+.+.+.++|+++|... -.|+.|.|. .....|.|-+..
T Consensus 98 ~~~~~c~~~~~~C~~--~--~~~~~d~~G~d~~~~~~~s~~~C~~~C~~~--~~C~~fTy~~~~~~~~~~~~~C~LK~s~ 171 (625)
T 2f83_A 98 YSFKQCSHQISACNK--D--IYVDLDMKGINYNSSVAKSAQECQERCTDD--VHCHFFTYATRQFPSLEHRNICLLKHTQ 171 (625)
T ss_dssp ECSTTCCSCCCCCCC--C--CEEEEEEECEEEEEEECSCHHHHHHHHHTS--SSCSEEEEECSSCSCSSSTTEEEEEECS
T ss_pred cccccCCCChhcCch--h--hccccceecceeeeEeeCCHHHHHHhccCC--CCCcEEEecCCcccCCCCCceeEeccCc
Confidence 4446777654 7732 1 235777778877788899999999999975 589999994 346789997754
Q ss_pred cccccCCCCcc-cCCCceEEecCCCCCCCcceEeeeecCceecccceeeecccCHHHHHHhhhCCCceEEEEecCCC---
Q psy3106 90 RITVAGHGAFE-ETKDIEYLENNCVDEPAKLCEFKKLAGRILKTVDSVYQDVASIEECRELCLNSPYRCHSYDYGDT--- 165 (433)
Q Consensus 90 ~~t~~~p~~f~-~~~~~dY~En~C~~~~~~~C~~~~~~~~~l~~~d~~~~~v~s~~eC~~~Cl~s~F~Crs~~~~~~--- 165 (433)
..+. |.... ...-.-|.-+.|... ...|...-+.+.-+.+.|-....+.+.++|+++|...+ .|+.|+|...
T Consensus 172 ~~~~--~~~~~~~g~vSG~s~k~c~~~-~~~c~~~~~~~~d~~g~d~~~~~~~~~~~C~~~C~~~~-~C~~fT~~~~~~~ 247 (625)
T 2f83_A 172 TGTP--TRITKLDKVVSGFSLKSCALS-NLACIRDIFPNTVFADSNIDSVMAPDAFVCGRICTHHP-GCLFFTFFSQEWP 247 (625)
T ss_dssp SSSC--SEEEEEEEEEEEECCTTTTCC-CSCCCCCCEEEEECCSEEEEEEECSSHHHHHHHHHTCS-SCSEEEEECTTCS
T ss_pred CCCC--ceeccccccccCCCCCCCCCc-hhhchhhcccCccccCcceeeeecCCHHHHHHhccCCC-CCcEEEEecCCcc
Confidence 3221 11110 111112334677653 23454322333333333323345679999999999874 4999998531
Q ss_pred ---CccceEEec
Q psy3106 166 ---GDLVCRLSH 174 (433)
Q Consensus 166 ---~~~~C~Ls~ 174 (433)
....|+|-.
T Consensus 248 ~~~~~~~C~LK~ 259 (625)
T 2f83_A 248 KESQRNLCLLKT 259 (625)
T ss_dssp SGGGTTEEEEEE
T ss_pred CcccCCeEEeec
Confidence 357999976
No 8
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=96.74 E-value=0.0033 Score=67.39 Aligned_cols=131 Identities=18% Similarity=0.268 Sum_probs=85.5
Q ss_pred cCeEEecceeeEeecCCHHHHHHHcccCCCceeeeEEeeCCCC--------ceEeecCCcccccCCCCcccCCCceEEec
Q psy3106 39 HGYSLLGFVKKVGTATSRTDCFEMCLGERDFICRSANYNNATG--------ECHMSDMDRITVAGHGAFEETKDIEYLEN 110 (433)
Q Consensus 39 ~g~~L~g~~~~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~--------~C~Ls~~~~~t~~~p~~f~~~~~~dY~En 110 (433)
.+..+.|.+.+.+.+.+.++|+..|... -.|+.|.|.+... .|.|-+.-..+. |..-....-.=|..+
T Consensus 26 ~~~d~~G~d~~~v~~~~~~~C~~~C~~~--~~C~~ft~~~~~~~~~~~~~~~C~LK~~~~~~~--~~~~~~~~~sg~~~~ 101 (625)
T 2f83_A 26 KDTCFEGGDITTVFTPSAKYCQVVCTYH--PRCLLFTFTAESPSEDPTRWFTCVLKDSVTETL--PRVNRTAAISGYSFK 101 (625)
T ss_dssp EEEEECSCEEEEEECSSHHHHHHHHHHS--SSCCEEEEECCCTTSCSTTTTEEEEECCGGGCC--CEEEEEEEEEEECST
T ss_pred ccccccCCceeEEecCCHHHHHHhccCC--CCeeEEEEeCCCCCccccccceEEecccccCCC--CccccCCcccccccc
Confidence 4556667777778888999999999976 4899999998765 499998754332 111111212233456
Q ss_pred CCCCCCCcceEeeeecCceecccceeeecccCHHHHHHhhhCCCceEEEEecCC------CCccceEEecC
Q psy3106 111 NCVDEPAKLCEFKKLAGRILKTVDSVYQDVASIEECRELCLNSPYRCHSYDYGD------TGDLVCRLSHH 175 (433)
Q Consensus 111 ~C~~~~~~~C~~~~~~~~~l~~~d~~~~~v~s~~eC~~~Cl~s~F~Crs~~~~~------~~~~~C~Ls~~ 175 (433)
.|...+ ..|....+.+.-+.+.|-....+.+.++|+++|...+ .|+.|+|-. .....|+|-+.
T Consensus 102 ~c~~~~-~~C~~~~~~~~d~~G~d~~~~~~~s~~~C~~~C~~~~-~C~~fTy~~~~~~~~~~~~~C~LK~s 170 (625)
T 2f83_A 102 QCSHQI-SACNKDIYVDLDMKGINYNSSVAKSAQECQERCTDDV-HCHFFTYATRQFPSLEHRNICLLKHT 170 (625)
T ss_dssp TCCSCC-CCCCCCCEEEEEEECEEEEEEECSCHHHHHHHHHTSS-SCSEEEEECSSCSCSSSTTEEEEEEC
T ss_pred cCCCCh-hcCchhhccccceecceeeeEeeCCHHHHHHhccCCC-CCcEEEecCCcccCCCCCceeEeccC
Confidence 787644 3574332333333343433344679999999998863 599999932 24678999653
No 9
>3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A
Probab=96.66 E-value=0.0016 Score=53.13 Aligned_cols=59 Identities=22% Similarity=0.482 Sum_probs=45.7
Q ss_pred EeeeecCceecccc----eeeecccCHHHHHHhhhCC---CceEEEEecCCCCccceEEecCCCcee
Q psy3106 121 EFKKLAGRILKTVD----SVYQDVASIEECRELCLNS---PYRCHSYDYGDTGDLVCRLSHHSRATL 180 (433)
Q Consensus 121 ~~~~~~~~~l~~~d----~~~~~v~s~~eC~~~Cl~s---~F~Crs~~~~~~~~~~C~Ls~~s~~t~ 180 (433)
.|+...|..|...| .....+.|+++|-.+|.++ +|.||+|.|.. ....|++...++.+.
T Consensus 16 ~y~kTeg~~L~~~~~~~~~~~~~~~s~eeCA~kC~~~~~~~F~CRAF~y~~-k~q~C~ll~~ns~s~ 81 (101)
T 3hms_A 16 EFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDK-ARKQCLWFPFNSMSS 81 (101)
T ss_dssp GEEEEEEEEEEECCTTCCCEEEECSCHHHHHHHHHHCTTCSSCCCEEEEET-TTTEEEEESCCTTST
T ss_pred HhhhcCCeEEeccCCCccceeeccCCHHHHHHHHHhccCCCcceeeeEEec-CCCcEEECCCcCCCc
Confidence 36667777666632 2344678999999999986 79999999996 578999998877554
No 10
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=96.44 E-value=0.0046 Score=54.77 Aligned_cols=122 Identities=15% Similarity=0.259 Sum_probs=81.2
Q ss_pred EecCeEEeccee-eEeecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecCCcccccCCCCcccCCCceEEecCCCCC
Q psy3106 37 RVHGYSLLGFVK-KVGTATSRTDCFEMCLGERDFICRSANYNNATGECHMSDMDRITVAGHGAFEETKDIEYLENNCVDE 115 (433)
Q Consensus 37 r~~g~~L~g~~~-~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~~~~t~~~p~~f~~~~~~dY~En~C~~~ 115 (433)
..++.-+.|-.. ..+.+.+.++|+..|... -.|+.|.|......|.|-+..... ....+++==-+.|..
T Consensus 13 ~~~n~~~~g~~i~~~~~~~s~~~Cq~~C~~~--p~C~~fTf~~~~~~C~LK~s~~~~-------~~~~g~iSG~k~C~~- 82 (161)
T 4a5v_A 13 HSDNKGSRAPTIGEPVPDVSLEQCAAQCKAV--DGCTHFTYNDDSKMCHVKEGKPDL-------YDLTGGKTASRSCDR- 82 (161)
T ss_dssp CCSSEEECSCBCSCCBTTCCHHHHHHHHHHS--TTCSEEEEETTTCCEEEECSSCCE-------EECTTEEEEESCCCC-
T ss_pred cCCCccccCCCeeeeecCCCHHHHHHHCcCC--CCCcEEEEECCCCEEEEeCCCCCE-------EEcCCceeCCCcCCc-
Confidence 355777776555 777899999999999986 479999999999999999854211 111111111234542
Q ss_pred CCcceEeeeecCceeccc-ce-eeecccCHHHHHHhhhCCCceEEEEecCCCCccceEEecCC
Q psy3106 116 PAKLCEFKKLAGRILKTV-DS-VYQDVASIEECRELCLNSPYRCHSYDYGDTGDLVCRLSHHS 176 (433)
Q Consensus 116 ~~~~C~~~~~~~~~l~~~-d~-~~~~v~s~~eC~~~Cl~s~F~Crs~~~~~~~~~~C~Ls~~s 176 (433)
.|.. .+.-+.+. |. ....+.+.++|+++|...+ .|+.|.|.. ....|+|-...
T Consensus 83 ---~C~~---~~vD~~G~~dl~~~~~~~s~~~Cq~~C~~~~-~C~~fTy~~-~~~~C~LK~~~ 137 (161)
T 4a5v_A 83 ---SCFE---QHVSYEGAPDVMTAMVTSQSADCQAACAADP-SCEIFTYNE-HDQKCTFKGRG 137 (161)
T ss_dssp ---TTCE---ESEEECSSCBSSCCCBCSCHHHHHHHHHHCT-TCCEEEEET-TTTEEEEECTT
T ss_pred ---chhh---CCCcccCchhccccccCCCHHHHHHHcccCC-CCCEEEeeC-CCCeeEeCCCC
Confidence 3432 22222233 21 2235678999999999873 699999985 68899995543
No 11
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=96.39 E-value=0.013 Score=50.52 Aligned_cols=109 Identities=19% Similarity=0.368 Sum_probs=72.5
Q ss_pred eEeecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecCCcccccCCCCcccCCCceEEecCCCCCCCcceEeee--ec
Q psy3106 49 KVGTATSRTDCFEMCLGERDFICRSANYNNATGECHMSDMDRITVAGHGAFEETKDIEYLENNCVDEPAKLCEFKK--LA 126 (433)
Q Consensus 49 ~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~~~~t~~~p~~f~~~~~~dY~En~C~~~~~~~C~~~~--~~ 126 (433)
.+..+.|.++|+++|..+ -.|+-|.|+..++.|.|-+... . +....++.==-+.|.. .|.... +.
T Consensus 24 ~~~~v~Sa~~Cq~~C~~~--~~C~~FTf~~~~k~C~LK~~~~------~-~~~~~g~vSGpk~C~~----~C~~~~vdy~ 90 (138)
T 2yil_A 24 SVVHVASAQDCMKECQAL--PTCSHFTYNKNSKKCHLKAGAP------E-FYTYTGDMTGPRSCEH----NCSDACWMDG 90 (138)
T ss_dssp EEEECSSHHHHHHHHHHS--TTCCEEEEETTTCEEEEECSCC------C-EEECTTEEEEESCTTC----CCCSSEETTC
T ss_pred cccCCCCHHHHHHHccCC--CCCCEEEEECCCCEEEeccCch------h-eeecCCceecCCcCcc----cHHhcCCCcc
Confidence 357899999999999976 4799999999999999996421 1 2222222222455632 453222 33
Q ss_pred CceecccceeeecccCHHHHHHhhhCCCceEEEEecCCCCccceEEecCCC
Q psy3106 127 GRILKTVDSVYQDVASIEECRELCLNSPYRCHSYDYGDTGDLVCRLSHHSR 177 (433)
Q Consensus 127 ~~~l~~~d~~~~~v~s~~eC~~~Cl~s~F~Crs~~~~~~~~~~C~Ls~~s~ 177 (433)
|.-+.. ....+.+..+|+++|...+ .|..|+|.. ..|+|-..+.
T Consensus 91 G~d~~~---~~~s~~~a~~CQ~~C~~~~-~C~~fTf~~---~tC~lk~~da 134 (138)
T 2yil_A 91 NNPLAV---WDYSGQPPALCWAACMGTP-GCDLYTFQG---MTCKLYSQTS 134 (138)
T ss_dssp CCCSEE---EECTTCCTHHHHHHHHTST-TCCEEECGG---GEEEEECCCC
T ss_pred Cccccc---cccccCCHHHHHHHhCCCC-CCcEEEEeC---CeeEEECCcc
Confidence 433322 2223357999999999863 499999874 7899876544
No 12
>3sp8_A Hepatocyte growth factor alpha chain; kringle domain, Met tyrosine kinase, hormone; HET: MES; 1.86A {Homo sapiens} PDB: 3hn4_A*
Probab=95.23 E-value=0.018 Score=54.80 Aligned_cols=59 Identities=22% Similarity=0.495 Sum_probs=47.4
Q ss_pred EeeeecCceecccce----eeecccCHHHHHHhhhCC---CceEEEEecCCCCccceEEecCCCcee
Q psy3106 121 EFKKLAGRILKTVDS----VYQDVASIEECRELCLNS---PYRCHSYDYGDTGDLVCRLSHHSRATL 180 (433)
Q Consensus 121 ~~~~~~~~~l~~~d~----~~~~v~s~~eC~~~Cl~s---~F~Crs~~~~~~~~~~C~Ls~~s~~t~ 180 (433)
.|....|..|..++. ....+.|+|||-.+|... +|.||+|.|.. ....|++-..++.+.
T Consensus 16 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ca~~c~~~~~~~f~craf~~~~-~~~~c~~~~~~~~s~ 81 (264)
T 3sp8_A 16 EFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDK-ARKQCLWFPFNSMSS 81 (264)
T ss_dssp GEEEETTEEEEESSTTCCCEEEECSCHHHHHHHHHSTTCSSSCCCEEEEET-TTTEEEEESCCTTST
T ss_pred hhhhccCeEEEeccccccceeeccCCHHHHHHHHhhccCCCccccceeeec-cCCeEEEccccCCCC
Confidence 466777777776655 345678999999999986 69999999996 688999998877654
No 13
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*
Probab=93.04 E-value=0.072 Score=41.60 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=36.0
Q ss_pred cceeeEeecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecC
Q psy3106 45 GFVKKVGTATSRTDCFEMCLGERDFICRSANYNNATGECHMSDM 88 (433)
Q Consensus 45 g~~~~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~ 88 (433)
+..+..+.+.++++|+.+|+.+ -.|++|.|+....-|.|-+.
T Consensus 21 ~~i~~~~~~~sl~~Cq~aC~a~--~~C~aFTyN~~s~~CflKs~ 62 (82)
T 2ll3_A 21 QTIGEVKRASSLSECRARCQAE--KECSHYTYNVKSGLCYPKRG 62 (82)
T ss_dssp CBSSSCEECSSHHHHHHHHHHC--TTEEEEEEETTTTEEEEEES
T ss_pred ccccccccCCCHHHHHHHhhcc--CCCCeEEeccCCCceEcccC
Confidence 3445667889999999999976 48999999999999999864
No 14
>2qj2_A Hepatocyte growth factor; HGF/SF, hormone/growth factor; 1.81A {Homo sapiens} SCOP: g.10.1.1 g.14.1.1 PDB: 1nk1_A 3mkp_A* 1gmn_A* 1gmo_A* 1bht_A* 1gp9_A* 2qj4_A
Probab=90.54 E-value=0.32 Score=43.67 Aligned_cols=56 Identities=21% Similarity=0.491 Sum_probs=42.6
Q ss_pred EeeeecCceeccc----ceeeecccCHHHHHHhhhCC---CceEEEEecCCCCccceEEecCCC
Q psy3106 121 EFKKLAGRILKTV----DSVYQDVASIEECRELCLNS---PYRCHSYDYGDTGDLVCRLSHHSR 177 (433)
Q Consensus 121 ~~~~~~~~~l~~~----d~~~~~v~s~~eC~~~Cl~s---~F~Crs~~~~~~~~~~C~Ls~~s~ 177 (433)
+|.+..+..|... ......|+++++|-.+|.+. +|.||+|.|.. ....|.+-..+.
T Consensus 16 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~Ca~~C~~~~~~~~~C~af~y~~-~~~~C~~~p~~~ 78 (184)
T 2qj2_A 16 EFKKSAKTTLIKIDPALKIKTKKVNTADQCANRCTRNKGLPFTCKAFVFDK-ARKQCLWFPFNS 78 (184)
T ss_dssp GEEEETTEEEEECSTTCCCEEEECSCHHHHHHHHHTTTTCSSCCCEEEEET-TTTEEEEESSCT
T ss_pred HHhhhcCcEEeccCccccccccccCCHHHHHHHHHhccCCcceeecceEec-cCCeEEEcCCcC
Confidence 4677777777663 23345788999999999997 79999999985 567899854433
No 15
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=89.69 E-value=0.23 Score=54.59 Aligned_cols=57 Identities=23% Similarity=0.508 Sum_probs=46.8
Q ss_pred eeeecCceecccceeeecccCHHHHHHhhhCC-CceEEEEecCCCCccceEEecCCCce
Q psy3106 122 FKKLAGRILKTVDSVYQDVASIEECRELCLNS-PYRCHSYDYGDTGDLVCRLSHHSRAT 179 (433)
Q Consensus 122 ~~~~~~~~l~~~d~~~~~v~s~~eC~~~Cl~s-~F~Crs~~~~~~~~~~C~Ls~~s~~t 179 (433)
|....+..|...+.....+.++++|..+|... .|.||+|.|.. +...|++-..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~ca~~c~~~~~~~cr~f~~~~-~~~~c~~~~~~~~~ 63 (791)
T 4dur_A 6 YVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFTCRAFQYHS-KEQQCVIMAENRKS 63 (791)
T ss_dssp EEEEEEEEECCSSEEEEECSSHHHHHHHHHHCSSSCCCEEEEET-TTTEEEEESCCTTT
T ss_pred hhhcCCeEEeccChhhcccCCHHHHHHHhhccCCcceeeeeeec-cCCceEECCCcCCC
Confidence 55666777777666666788999999999997 79999999996 68899998887655
No 16
>4a5v_A MIC4, micronemal protein 4; adhesion; NMR {Toxoplasma gondii}
Probab=84.84 E-value=0.78 Score=40.26 Aligned_cols=58 Identities=22% Similarity=0.481 Sum_probs=46.3
Q ss_pred CCCCCeEEEEecCeEEecc-ee-eEeecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecCCc
Q psy3106 28 PCERAWCFDRVHGYSLLGF-VK-KVGTATSRTDCFEMCLGERDFICRSANYNNATGECHMSDMDR 90 (433)
Q Consensus 28 ~C~~~~~Fer~~g~~L~g~-~~-~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~~~ 90 (433)
.|.. ++|+ .|..+.|. .. ..+.+.+.++|+++|... -.|+.|.|......|.|-....
T Consensus 79 ~C~~-~C~~--~~vD~~G~~dl~~~~~~~s~~~Cq~~C~~~--~~C~~fTy~~~~~~C~LK~~~~ 138 (161)
T 4a5v_A 79 SCDR-SCFE--QHVSYEGAPDVMTAMVTSQSADCQAACAAD--PSCEIFTYNEHDQKCTFKGRGF 138 (161)
T ss_dssp CCCC-TTCE--ESEEECSSCBSSCCCBCSCHHHHHHHHHHC--TTCCEEEEETTTTEEEEECTTT
T ss_pred cCCc-chhh--CCCcccCchhccccccCCCHHHHHHHcccC--CCCCEEEeeCCCCeeEeCCCCC
Confidence 5653 4554 78888888 44 447889999999999987 5899999999999999965543
No 17
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*
Probab=61.14 E-value=6.4 Score=30.49 Aligned_cols=34 Identities=26% Similarity=0.587 Sum_probs=28.0
Q ss_pred ccCHHHHHHhhhCCCceEEEEecCCCCccceEEecC
Q psy3106 140 VASIEECRELCLNSPYRCHSYDYGDTGDLVCRLSHH 175 (433)
Q Consensus 140 v~s~~eC~~~Cl~s~F~Crs~~~~~~~~~~C~Ls~~ 175 (433)
+.++++|+..|+.. =.|+.|.|.. ...-|+|-..
T Consensus 29 ~~sl~~Cq~aC~a~-~~C~aFTyN~-~s~~CflKs~ 62 (82)
T 2ll3_A 29 ASSLSECRARCQAE-KECSHYTYNV-KSGLCYPKRG 62 (82)
T ss_dssp CSSHHHHHHHHHHC-TTEEEEEEET-TTTEEEEEES
T ss_pred CCCHHHHHHHhhcc-CCCCeEEecc-CCCceEcccC
Confidence 35999999999975 2499999995 6889999654
No 18
>1hky_A MIC-5, etmic5, microneme protein 5 precursor; adhesin, PAN module; NMR {Eimeria tenella} SCOP: g.10.1.3
Probab=41.63 E-value=28 Score=25.54 Aligned_cols=44 Identities=25% Similarity=0.385 Sum_probs=34.3
Q ss_pred ceeeEeecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecCCcccc
Q psy3106 46 FVKKVGTATSRTDCFEMCLGERDFICRSANYNNATGECHMSDMDRITV 93 (433)
Q Consensus 46 ~~~~~~~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~~~~t~ 93 (433)
-++..-.+.|-..|++.|... -.||=|.. ..+.|.|...+..-+
T Consensus 24 kaiseakaassqacqelcekd--akcrfftl--asgkcslfaddaalr 67 (86)
T 1hky_A 24 KAISEAKAASSQACQELCEKD--AKCRFFTL--ASGKCSLFADDAALR 67 (86)
T ss_dssp CCSEEECCSSHHHHHHHHHHC--TTCSBCEE--CSSCEEEBSSCSSCB
T ss_pred hhhhhhHHHhHHHHHHHHhcc--cceeEEEe--ecCceeeeccchhcC
Confidence 344455788999999999965 57987665 689999999876655
No 19
>2yil_A Microneme antigen L2; sugar binding protein, apple-domain tandem repeat, PAN_AP, P galactose-binding lectin, cellular adhesion; 1.95A {Sarcocystis muris} PDB: 2yio_A* 2yip_A*
Probab=36.15 E-value=14 Score=31.33 Aligned_cols=37 Identities=14% Similarity=0.412 Sum_probs=29.7
Q ss_pred ecCCHHHHHHHcccCCCceeeeEEeeCCCCceEeecCCccc
Q psy3106 52 TATSRTDCFEMCLGERDFICRSANYNNATGECHMSDMDRIT 92 (433)
Q Consensus 52 ~~~s~~eC~~~C~~e~~f~CrS~~y~~~~~~C~Ls~~~~~t 92 (433)
.+.+..+|+.+|..+ -.|+-|.|.. +.|.|-..+..-
T Consensus 100 s~~~a~~CQ~~C~~~--~~C~~fTf~~--~tC~lk~~da~~ 136 (138)
T 2yil_A 100 SGQPPALCWAACMGT--PGCDLYTFQG--MTCKLYSQTSSK 136 (138)
T ss_dssp TTCCTHHHHHHHHTS--TTCCEEECGG--GEEEEECCCC--
T ss_pred ccCCHHHHHHHhCCC--CCCcEEEEeC--CeeEEECCcccc
Confidence 446899999999976 4799999986 999998876543
No 20
>1i8n_A Anti-platelet protein; PAN module, toxin; 2.20A {Haementeria officinalis} SCOP: g.10.1.2
Probab=29.72 E-value=1e+02 Score=23.97 Aligned_cols=61 Identities=23% Similarity=0.367 Sum_probs=43.4
Q ss_pred eEEEEecCeEEecceeeEeecCCHHHHHHHcccCC-CceeeeEEeeCCCCceEeecCCcccc
Q psy3106 33 WCFDRVHGYSLLGFVKKVGTATSRTDCFEMCLGER-DFICRSANYNNATGECHMSDMDRITV 93 (433)
Q Consensus 33 ~~Fer~~g~~L~g~~~~~~~~~s~~eC~~~C~~e~-~f~CrS~~y~~~~~~C~Ls~~~~~t~ 93 (433)
-++.+.||..|-..-..-..-.|+.||..+|-.+. .-.|--..-+.++.+|.-+.+...+-
T Consensus 45 dcwskrpgwklpdnlltkteftsvdecrkmceesavepscyilqintetnecyrnnegdvtw 106 (126)
T 1i8n_A 45 DCWSKRPGWKLPDNLLTKTEFTSVDECRKMCEESAVEPSCYILQINTETNECYRNNEGDVTW 106 (126)
T ss_dssp EEEEEEETCBCCGGGEEECSCCSHHHHHHHHHHCCSSSCCCEEEEETTTCCEEEECSSSCCG
T ss_pred chhccCCCCcCCcccccccccccHHHHHHHHHhcccCCceEEEEecccchhhhccCCCceee
Confidence 45567888888533222223458999999998653 45788888888999999888765544
Done!