BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3116
(177 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2D8S|A Chain A, Solution Structure Of The Ring Domain Of The Human
Cellular Modulator Of Immune Recognition Protein
Length = 80
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 30 PDSSDDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
P S D ICRIC+ G D+ L++ C C GS+ +VH C+++W++ C+LCKY
Sbjct: 12 PSSQD-----ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 66
Query: 88 QFTTE 92
+F E
Sbjct: 67 EFIME 71
>pdb|1VYX|A Chain A, Solution Structure Of The Kshv K3 N-Terminal Domain
Length = 60
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 34 DDEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
+DED+ +C IC C C G + VH C+ WL C +C + T
Sbjct: 2 EDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59
>pdb|1HK2|A Chain A, Human Serum Albumin Mutant R218h Complexed With Thyroxine
(3,3',5,5'-Tetraiodo-L-Thyronine)
pdb|1HK5|A Chain A, Human Serum Albumin Mutant R218h Complexed With Thyroxine
(3,3',5,5'-Tetraiodo-L-Thyronine) And Myristic Acid
(Tetradecanoic Acid)
Length = 585
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHTECCHGDLLECADDRADLAKY 263
>pdb|1HK3|A Chain A, Human Serum Albumin Mutant R218p Complexed With Thyroxine
(3,3',5,5'-Tetraiodo-L-Thyronine)
Length = 585
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHTECCHGDLLECADDRADLAKY 263
>pdb|2BXI|A Chain A, Human Serum Albumin Complexed With Myristate And
Azapropazone
pdb|2BXK|A Chain A, Human Serum Albumin Complexed With Myristate, Azapropazone
And Indomethacin
pdb|2BXQ|A Chain A, Human Serum Albumin Complexed With Myristate,
Phenylbutazone And Indomethacin
pdb|2XSI|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Glutamate And
Myristic Acid
pdb|2XVV|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Asparagine And
Myristic Acid
pdb|2XVW|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Arginine And
Myristic Acid
Length = 585
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHTECCHGDLLECADDRADLAKY 263
>pdb|3CX9|A Chain A, Crystal Structure Of Human Serum Albumin Complexed With
Myristic Acid And Lysophosphatidylethanolamine
pdb|3SQJ|A Chain A, Recombinant Human Serum Albumin From Transgenic Plant
pdb|3SQJ|B Chain B, Recombinant Human Serum Albumin From Transgenic Plant
Length = 582
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 239 VHTECCHGDLLECADDRADLAKY 261
>pdb|2VDB|A Chain A, Structure Of Human Serum Albumin With S-Naproxen And The
Ga Module
Length = 579
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 236 VHTECCHGDLLECADDRADLAKY 258
>pdb|2I2Z|A Chain A, Human Serum Albumin Complexed With Myristate And Aspirin
Length = 585
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHTECCHGDLLECADDRADLAKY 263
>pdb|1AO6|A Chain A, Crystal Structure Of Human Serum Albumin
pdb|1AO6|B Chain B, Crystal Structure Of Human Serum Albumin
pdb|1BM0|A Chain A, Crystal Structure Of Human Serum Albumin
pdb|1BM0|B Chain B, Crystal Structure Of Human Serum Albumin
pdb|1E7E|A Chain A, Human Serum Albumin Complexed With Decanoic Acid (Capric
Acid)
pdb|1E7F|A Chain A, Human Serum Albumin Complexed With Dodecanoic Acid (Lauric
Acid)
pdb|1E7G|A Chain A, Human Serum Albumin Complexed With Tetradecanoic Acid
(Myristic Acid) Human Serum Albumin Complexed With
Myristic Acid
pdb|1E7I|A Chain A, Human Serum Albumin Complexed With Octadecanoic Acid
(Stearic Acid)
pdb|1E7H|A Chain A, Human Serum Albumin Complexed With Hexadecanoic Acid
(Palmitic Acid)
pdb|1E7A|A Chain A, Crystal Structure Of Human Serum Albumin Complexed With
The General Anesthetic Propofol
pdb|1E7A|B Chain B, Crystal Structure Of Human Serum Albumin Complexed With
The General Anesthetic Propofol
pdb|1E7B|A Chain A, Crystal Structure Of Human Serum Albumin Complexed With
The General Anesthetic Halothane
pdb|1E7B|B Chain B, Crystal Structure Of Human Serum Albumin Complexed With
The General Anesthetic Halothane
pdb|1E7C|A Chain A, Human Serum Albumin Complexed With Myristic Acid And The
General Anesthetic Halothane
pdb|1E78|A Chain A, Crystal Structure Of Human Serum Albumin
pdb|1E78|B Chain B, Crystal Structure Of Human Serum Albumin
pdb|1H9Z|A Chain A, Human Serum Albumin Complexed With Myristic Acid And The
R-(+) Enantiomer Of Warfarin
pdb|1HA2|A Chain A, Human Serum Albumin Complexed With Myristic Acid And The
S- (-) Enantiomer Of Warfarin
pdb|1GNI|A Chain A, Human Serum Albumin Complexed With Cis-9-Octadecenoic Acid
(Oleic Acid)
pdb|1GNJ|A Chain A, Human Serum Albumin Complexed With Cis-5,8,11,14-
Eicosatetraenoic Acid (Arachidonic Acid)
pdb|1O9X|A Chain A, Human Serum Albumin Complexed With Tetradecanoic Acid
(Myristic Acid) And Hemin
pdb|1HK1|A Chain A, Human Serum Albumin Complexed With Thyroxine (3,3',5,5'-
Tetraiodo-L-Thyronine)
pdb|1HK4|A Chain A, Human Serum Albumin Complexed With Thyroxine (3,3',5,5'-
Tetraiodo-L-Thyronine) And Myristic Acid (Tetradecanoic
Acid)
pdb|1N5U|A Chain A, X-Ray Study Of Human Serum Albumin Complexed With Heme
pdb|2BX8|A Chain A, Human Serum Albumin Complexed With Azapropazone
pdb|2BX8|B Chain B, Human Serum Albumin Complexed With Azapropazone
pdb|2BXA|A Chain A, Human Serum Albumin Complexed With 3-Carboxy-4-Methyl-5-
Propyl-2-Furanpropanoic Acid (Cmpf)
pdb|2BXA|B Chain B, Human Serum Albumin Complexed With 3-Carboxy-4-Methyl-5-
Propyl-2-Furanpropanoic Acid (Cmpf)
pdb|2BXB|A Chain A, Human Serum Albumin Complexed With Oxyphenbutazone
pdb|2BXB|B Chain B, Human Serum Albumin Complexed With Oxyphenbutazone
pdb|2BXC|A Chain A, Human Serum Albumin Complexed With Phenylbutazone
pdb|2BXC|B Chain B, Human Serum Albumin Complexed With Phenylbutazone
pdb|2BXD|A Chain A, Human Serum Albumin Complexed With Warfarin
pdb|2BXD|B Chain B, Human Serum Albumin Complexed With Warfarin
pdb|2BXE|A Chain A, Human Serum Albumin Complexed With Diflunisal
pdb|2BXE|B Chain B, Human Serum Albumin Complexed With Diflunisal
pdb|2BXF|A Chain A, Human Serum Albumin Complexed With Diazepam
pdb|2BXF|B Chain B, Human Serum Albumin Complexed With Diazepam
pdb|2BXG|A Chain A, Human Serum Albumin Complexed With Ibuprofen
pdb|2BXG|B Chain B, Human Serum Albumin Complexed With Ibuprofen
pdb|2BXH|A Chain A, Human Serum Albumin Complexed With Indoxyl Sulfate
pdb|2BXH|B Chain B, Human Serum Albumin Complexed With Indoxyl Sulfate
pdb|2BXL|A Chain A, Human Serum Albumin Complexed With Myristate And 3,5-
Diiodosalicylic Acid
pdb|2BXM|A Chain A, Human Serum Albumin Complexed With Myristate And
Indomethacin
pdb|2BXN|A Chain A, Human Serum Albumin Complexed With Myristate And
Iodipamide
pdb|2BXO|A Chain A, Human Serum Albumin Complexed With Myristate And
Oxyphenbutazone
pdb|2BXP|A Chain A, Human Serum Albumin Complexed With Myristate And
Phenylbutazone
pdb|2ESG|C Chain C, Solution Structure Of The Complex Between Immunoglobulin
Iga1 And Human Serum Albumin
pdb|2I30|A Chain A, Human Serum Albumin Complexed With Myristate And Salicylic
Acid
pdb|1BJ5|A Chain A, Human Serum Albumin Complexed With Myristic Acid
pdb|1UOR|A Chain A, X-Ray Study Of Recombinant Human Serum Albumin. Phases
Determined By Molecular Replacement Method, Using Low
Resolution Structure Model Of Tetragonal Form Of Human
Serum Albumin
pdb|3B9L|A Chain A, Human Serum Albumin Complexed With Myristate And Azt
pdb|3B9M|A Chain A, Human Serum Albumin Complexed With Myristate, 3'-Azido-3'-
Deoxythymidine (Azt) And Salicylic Acid
pdb|2VUE|A Chain A, Human Serum Albumin Complexed With 4z,15e-Bilirubin-Ix-
Alpha
pdb|2VUE|B Chain B, Human Serum Albumin Complexed With 4z,15e-Bilirubin-Ix-
Alpha
pdb|2VUF|A Chain A, Human Serum Albumin Complexed With Fusidic Acid
pdb|2VUF|B Chain B, Human Serum Albumin Complexed With Fusidic Acid
pdb|3A73|A Chain A, Crystal Structure Analysis Of Human Serum Albumin
Complexed With Delta 12-Prostaglandin J2
pdb|3A73|B Chain B, Crystal Structure Analysis Of Human Serum Albumin
Complexed With Delta 12-Prostaglandin J2
pdb|3JQZ|A Chain A, Crystal Structure Of Human Serum Albumin Complexed With
Lidocaine
pdb|3JQZ|B Chain B, Crystal Structure Of Human Serum Albumin Complexed With
Lidocaine
pdb|3JRY|A Chain A, Human Serum Albumin With Bound Sulfate
pdb|3JRY|B Chain B, Human Serum Albumin With Bound Sulfate
pdb|3LU6|A Chain A, Human Serum Albumin In Complex With Compound 1
pdb|3LU6|B Chain B, Human Serum Albumin In Complex With Compound 1
pdb|3LU7|A Chain A, Human Serum Albumin In Complex With Compound 2
pdb|3LU7|B Chain B, Human Serum Albumin In Complex With Compound 2
pdb|3LU8|A Chain A, Human Serum Albumin In Complex With Compound 3
pdb|3LU8|B Chain B, Human Serum Albumin In Complex With Compound 3
pdb|2XVQ|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Sarcosine
pdb|2XVQ|B Chain B, Human Serum Albumin Complexed With Dansyl-L-Sarcosine
pdb|2XVU|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Asparagine
pdb|2XVU|B Chain B, Human Serum Albumin Complexed With Dansyl-L-Asparagine
pdb|2XW0|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Phenylalanine
pdb|2XW0|B Chain B, Human Serum Albumin Complexed With Dansyl-L-Phenylalanine
pdb|2XW1|A Chain A, Human Serum Albumin Complexed With Dansyl-L-Norvaline
pdb|2XW1|B Chain B, Human Serum Albumin Complexed With Dansyl-L-Norvaline
pdb|2YDF|A Chain A, Human Serum Albumin Complexed With Iophenoxic Acid
pdb|2YDF|B Chain B, Human Serum Albumin Complexed With Iophenoxic Acid
pdb|4EMX|A Chain A, Crystal Structure Analysis Of Human Serum Albumin In
Complex With Chloride Anions At Cryogenic Temperature
pdb|4EMX|B Chain B, Crystal Structure Analysis Of Human Serum Albumin In
Complex With Chloride Anions At Cryogenic Temperature
pdb|4E99|A Chain A, Human Serum Albumin Complex With Perfluorooctane Sulfonate
Potassium
pdb|3TDL|A Chain A, Structure Of Human Serum Albumin In Complex With Dauda
pdb|3UIV|A Chain A, Human Serum Albumin-Myristate-Amantadine Hydrochloride
Complex
pdb|3UIV|H Chain H, Human Serum Albumin-Myristate-Amantadine Hydrochloride
Complex
Length = 585
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHTECCHGDLLECADDRADLAKY 263
>pdb|1BKE|A Chain A, Human Serum Albumin In A Complex With Myristic Acid And
Tri- Iodobenzoic Acid
Length = 581
Score = 26.9 bits (58), Expect = 6.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 238 VHTECCHGDLLECADDRADLAKY 260
>pdb|1TF0|A Chain A, Crystal Structure Of The Ga Module Complexed With Human
Serum Albumin
Length = 572
Score = 26.9 bits (58), Expect = 6.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHTECCHGDLLECADDRADLAKY 263
>pdb|3V03|A Chain A, Crystal Structure Of Bovine Serum Albumin
pdb|3V03|B Chain B, Crystal Structure Of Bovine Serum Albumin
pdb|4F5S|A Chain A, Crystal Structure Of Bovine Serum Albumin
pdb|4F5S|B Chain B, Crystal Structure Of Bovine Serum Albumin
Length = 583
Score = 26.6 bits (57), Expect = 8.1, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 39 TICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
++ R+ + + + + + VH EC L EC D+ DL KY
Sbjct: 214 SVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKY 262
>pdb|3V08|A Chain A, Crystal Structure Of Equine Serum Albumin
pdb|4F5T|A Chain A, Crystal Structure Of Equine Serum Albumin
pdb|4F5U|A Chain A, Crystal Structure Of Equine Serum Albumin At 2.04
Resolution
Length = 583
Score = 26.6 bits (57), Expect = 8.4, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 39 TICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
++ R+ + + + + + VH EC L EC D+ DL KY
Sbjct: 214 SVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKY 262
>pdb|4F5V|A Chain A, Crystal Structure Of Leporine Serum Albumin
Length = 584
Score = 26.2 bits (56), Expect = 9.6, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHKECCHGDLLECADDRADLAKY 263
>pdb|3V09|A Chain A, Crystal Structure Of Rabbit Serum Albumin
Length = 584
Score = 26.2 bits (56), Expect = 9.6, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 65 VHIECIERWLQECGVDKCDLCKY 87
VH EC L EC D+ DL KY
Sbjct: 241 VHKECCHGDLLECADDRADLAKY 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,143,527
Number of Sequences: 62578
Number of extensions: 188973
Number of successful extensions: 478
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 463
Number of HSP's gapped (non-prelim): 16
length of query: 177
length of database: 14,973,337
effective HSP length: 92
effective length of query: 85
effective length of database: 9,216,161
effective search space: 783373685
effective search space used: 783373685
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)