BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3116
(177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86UD3|MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=2
SV=1
Length = 253
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 33 SDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
S D +CRIC+ G+ Q++LLS C+C G++ +H C+E WL C+LC ++F
Sbjct: 63 SPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAV 122
Query: 92 ERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
ER P + L+ W+++ + + + D +P L T+SG+
Sbjct: 123 ERKP-----RPLVEWLRNPGPQHEKRTLFGDMVCFLFITP---LATISGW 164
>sp|Q0IH10|MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2
SV=1
Length = 252
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 33 SDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
S D +CRIC+ G+ Q++LLS C+C G++ +H C+E WL C+LC ++F+
Sbjct: 62 SSFNDHPMCRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFSV 121
Query: 92 ERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
ER P + L+ W+++ + + + D +P L T+SG+
Sbjct: 122 ERKP-----RPLVEWLRNPGPQHEKRTLFGDMVCFLFITP---LATISGW 163
>sp|Q5XIE5|MARH3_RAT E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3
PE=1 SV=1
Length = 253
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 33 SDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
S D +CRIC+ G+ Q++LLS C+C G++ +H C+E WL C+LC ++F
Sbjct: 63 SPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAV 122
Query: 92 ERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
ER P + L+ W+++ + + + D +P L T+SG+
Sbjct: 123 ERKP-----RPLVEWLRNPGPQHEKRTLFGDMVCFLFITP---LATISGW 164
>sp|A0JN69|MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2
SV=1
Length = 253
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 33 SDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
S D +CRIC+ G+ Q++LLS C+C G++ +H C+E WL C+LC ++F
Sbjct: 63 SPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAV 122
Query: 92 ERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
ER P + L+ W+++ + + + D +P L T+SG+
Sbjct: 123 ERKP-----RPLVEWLRNPGPQHEKRTLFGDMVCFLFITP---LATISGW 164
>sp|Q68FA7|MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3
PE=2 SV=1
Length = 251
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 37 DMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLP 95
D +CRIC+ G+ Q++LLS C+C G++ +H C+E WL C+LC ++F+ ER P
Sbjct: 65 DRPMCRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFSVERKP 124
Query: 96 TQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
+ L+ W+++ + + + D +P L T+SG+
Sbjct: 125 -----RPLVEWLRNPGPQHEKRTLFGDMVCFLFITP---LATISGW 162
>sp|Q8BRX9|MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2
SV=1
Length = 218
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 33 SDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
S D +CRIC+ G+ Q++LLS C+C G++ +H C+E WL C+LC ++F
Sbjct: 63 SPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAV 122
Query: 92 ERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
ER P + L+ W+++ + + + D +P L T+SG+
Sbjct: 123 ERKP-----RPLVEWLRNPGPQHEKRTLFGDMVCFLFITP---LATISGW 164
>sp|Q5I0I2|MARH2_RAT E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2
PE=1 SV=1
Length = 246
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 9 VTSFNSMGTKIFDKLMIQLDKPDSSDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHI 67
V S ++ ++ LD P D CRIC+ GA+ +NLLS C C G++ VH
Sbjct: 37 VAQVTSRDGRLLSTVIRALDTPS-----DCPFCRICHEGANGENLLSPCGCTGTLGAVHK 91
Query: 68 ECIERWLQECGVDKCDLCKYQFTTERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATF 127
C+E+WL C+LC +F E+ P + L W+K R + + D
Sbjct: 92 SCLEKWLSSSNTSYCELCHTEFAVEKRP-----RPLTEWLKDPGPRTEKRTLCCDMVCFV 146
Query: 128 LFSPFIIL---LTLSGYQ 142
+P + L L G Q
Sbjct: 147 FITPLAAISGWLCLRGAQ 164
>sp|Q32L65|MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus GN=MARCH2 PE=2
SV=1
Length = 245
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 9 VTSFNSMGTKIFDKLMIQLDKPDSSDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHI 67
V S ++ ++ L+ P D CRIC+ GA+ ++LLS C C G++ VH
Sbjct: 37 VAQVTSRDGRLLSTVIRALETPS-----DGPFCRICHEGANGESLLSPCGCSGTLGAVHK 91
Query: 68 ECIERWLQECGVDKCDLCKYQFTTERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATF 127
C+ERWL C+LC +F E+ + +SL W+K R + + D
Sbjct: 92 SCLERWLSSSNTSYCELCHTEFAVEK-----RSRSLTEWLKDPGPRTEKRTLCCDVVCFL 146
Query: 128 LFSPFIILLTLSGYQTF--SNNAIRLDYYI 155
+P L +SG+ + + +RL ++
Sbjct: 147 FITP---LAAISGWLCLRGAQDHLRLHSHL 173
>sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2
SV=1
Length = 246
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 9 VTSFNSMGTKIFDKLMIQLDKPDSSDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHI 67
V S ++ ++ LD D CRIC+ GA+ +NLLS C C G++ VH
Sbjct: 37 VAQVTSRDGRLLSTVIRALD-----SQSDCPFCRICHEGANGENLLSPCGCTGTLGAVHK 91
Query: 68 ECIERWLQECGVDKCDLCKYQFTTERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATF 127
C+E+WL C+LC +F E+ P + L W+K R + + D
Sbjct: 92 SCLEKWLSSSNTSYCELCHTEFAVEKRP-----RPLTEWLKDPGPRTEKRTLCCDMVCFV 146
Query: 128 LFSPFIIL---LTLSGYQ 142
+P + L L G Q
Sbjct: 147 FITPLAAISGWLCLRGAQ 164
>sp|Q9P0N8|MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 OS=Homo sapiens GN=MARCH2 PE=1
SV=1
Length = 246
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Query: 9 VTSFNSMGTKIFDKLMIQLDKPDSSDDEDMTICRICY-GADQQNLLSICQCKGSIAYVHI 67
V S ++ ++ LD P D CRIC+ GA+ + LLS C C G++ VH
Sbjct: 37 VAQVTSRDGRLLSTVIRALDTPS-----DGPFCRICHEGANGECLLSPCGCTGTLGAVHK 91
Query: 68 ECIERWLQECGVDKCDLCKYQFTTERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATF 127
C+E+WL C+LC +F E+ P + L W+K R + + D
Sbjct: 92 SCLEKWLSSSNTSYCELCHTEFAVEKRP-----RPLTEWLKDPGPRTEKRTLCCDMVCFL 146
Query: 128 LFSPFIIL---LTLSGYQ 142
+P + L L G Q
Sbjct: 147 FITPLAAISGWLCLRGAQ 164
>sp|Q5PQ35|MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2
SV=1
Length = 246
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 37 DMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLP 95
D ICRIC+ G + + LLS C C G++ VH C+E+WL C+LC +F ER P
Sbjct: 60 DGPICRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFAVERRP 119
Query: 96 TQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
+ + W+K R + + D +P L +SG+
Sbjct: 120 -----RPVTEWLKDPGPRHEKRTLFCDMVCFLFITP---LAAISGW 157
>sp|Q28EX7|MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 OS=Xenopus tropicalis GN=march2
PE=2 SV=1
Length = 246
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 37 DMTICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLP 95
D ICRIC+ G + + LLS C C G++ VH C+E+WL C+LC +F ER P
Sbjct: 60 DGPICRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFAVERRP 119
Query: 96 TQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPFIILLTLSGY 141
+ + W+K R + + D +P L +SG+
Sbjct: 120 -----RPVTEWLKDPGPRNEKRTLFCDMVCFLFITP---LAAISGW 157
>sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Danio rerio GN=march2 PE=2
SV=1
Length = 249
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 17 TKIFDKLMIQLDKPDSSDDEDMTICRICY-GAD---QQNLLSICQCKGSIAYVHIECIER 72
+ + L Q D+P ICRIC+ G D + LLS C C G++ VH C+E+
Sbjct: 49 STVIKALGTQSDRP---------ICRICHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEK 99
Query: 73 WLQECGVDKCDLCKYQFTTERLPTQTKLKSLLSWVKHVDNREDMEEMLTDFAATFLFSPF 132
WL C+LC +FT ER P + L W++ R + + D +P
Sbjct: 100 WLSSSNTSYCELCHTEFTIERRP-----RPLTEWLRDPGPRNEKRTLFCDMVCFLFITPL 154
Query: 133 IIL---LTLSGYQ 142
+ L L G Q
Sbjct: 155 AAISGWLCLRGAQ 167
>sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus GN=March8 PE=2
SV=1
Length = 286
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 40 ICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQ 97
ICRIC+ G D+ L++ C C GS+ +VH C+++W++ C+LCKY+F E
Sbjct: 75 ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME----- 129
Query: 98 TKLKSLLSWVK 108
TKLK L W K
Sbjct: 130 TKLKPLRKWEK 140
>sp|Q5T0T0|MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens GN=MARCH8 PE=1
SV=1
Length = 291
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 30 PDSSDDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
P S D ICRIC+ G D+ L++ C C GS+ +VH C+++W++ C+LCKY
Sbjct: 74 PSSQD-----ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 128
Query: 88 QFTTERLPTQTKLKSLLSWVK 108
+F E TKLK L W K
Sbjct: 129 EFIME-----TKLKPLRKWEK 144
>sp|Q0VD59|MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus GN=MARCH8 PE=2
SV=1
Length = 289
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 40 ICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQ 97
ICRIC+ G D+ L++ C+C GS+ +VH C+++W++ C+LCKY+F E
Sbjct: 77 ICRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEFIME----- 131
Query: 98 TKLKSLLSWVK 108
TKLK L W K
Sbjct: 132 TKLKPLRKWEK 142
>sp|Q28IK8|MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis GN=march8
PE=2 SV=1
Length = 264
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 30 PDSSDDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
P S D ICRIC+ G D+ L++ C C GS+ +VH C+++W++ C+LCK+
Sbjct: 47 PSSQD-----ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKF 101
Query: 88 QFTTERLPTQTKLKSLLSWVK 108
+F E TKLK L W K
Sbjct: 102 EFIME-----TKLKPLRKWEK 117
>sp|Q5XH39|MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis GN=march8 PE=2
SV=2
Length = 264
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 30 PDSSDDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
P S D ICRIC+ G D+ L++ C C GS+ +VH C+++W++ C+LCK+
Sbjct: 47 PSSQD-----ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKF 101
Query: 88 QFTTERLPTQTKLKSLLSWVK 108
+F E TKLK L W K
Sbjct: 102 EFIME-----TKLKPLRKWEK 117
>sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus musculus GN=March1 PE=1
SV=2
Length = 289
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 40 ICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQ 97
ICRIC+ G ++ L++ C+C G++ +VH C+ +W++ C+LCKY F E
Sbjct: 79 ICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIME----- 133
Query: 98 TKLKSLLSWVK 108
TKLK L W K
Sbjct: 134 TKLKPLRKWEK 144
>sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo sapiens GN=MARCH1 PE=1
SV=1
Length = 289
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 40 ICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQ 97
ICRIC+ G ++ L++ C+C G++ +VH C+ +W++ C+LCKY F E
Sbjct: 79 ICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIME----- 133
Query: 98 TKLKSLLSWVK 108
TKLK L W K
Sbjct: 134 TKLKPLRKWEK 144
>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus musculus GN=March11 PE=2
SV=2
Length = 400
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 40 ICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQT 98
IC+IC+ GA+Q LL+ C+C GS+ Y H C+ +W+ E G C+LC Y++ T
Sbjct: 167 ICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHV----TAI 222
Query: 99 KLKSLLSWVK-HVDNREDMEEMLTDFAATFLFSPFIILLTLSGYQTFSNNAI--RLDYYI 155
K+K W + E ++ + + FL + LL + FS A+ R D
Sbjct: 223 KMKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLL----WSAFSPYAVWQRKDILF 278
Query: 156 GITYS 160
I Y
Sbjct: 279 QICYG 283
>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus norvegicus GN=March11
PE=1 SV=1
Length = 398
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 40 ICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQT 98
IC+IC+ GA+Q LL+ C+C GS+ Y H C+ +W+ E G C+LC Y++ T
Sbjct: 165 ICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHV----TAI 220
Query: 99 KLKSLLSWVK-HVDNREDMEEMLTDFAATFLFSPFIILLTLSGYQTFSNNAI--RLDYYI 155
K+K W + E ++ + + FL + LL + FS A+ R D
Sbjct: 221 KMKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLL----WSAFSPYAVWQRKDILF 276
Query: 156 GITYS 160
I Y
Sbjct: 277 QICYG 281
>sp|O60103|DOA10_SCHPO ERAD-associated E3 ubiquitin-protein ligase doa10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=doa10 PE=1 SV=1
Length = 1242
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 32 SSDDEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
++DDE +CR C GA L C+C GSI YVH EC+ WL C+LCK +F
Sbjct: 2 NADDEICRVCR-CEGAPDSPLFHPCKCTGSIRYVHQECLVEWLGHSKKTHCELCKAKFEF 60
Query: 92 ERLPTQTKLKSL 103
++ +++ +++
Sbjct: 61 TKVYSESMPRTI 72
>sp|Q9P2E8|MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 OS=Homo sapiens GN=MARCH4 PE=2
SV=2
Length = 410
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 31 DSSDDEDM--TICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKY 87
SS D M +CRIC+ G +Q LLS C+C GS+ H C+ +W+ E G C+LC Y
Sbjct: 151 GSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYY 210
Query: 88 QFTTERLPTQTKLK 101
++ + T+ L+
Sbjct: 211 KYHVIAISTKNPLQ 224
>sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pongo abelii GN=MARCH6 PE=2
SV=1
Length = 910
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 34 DDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFT- 90
D + ICR+C G ++ L C C GSI ++H EC+ +WL+ + C+LCK++F
Sbjct: 2 DTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAF 61
Query: 91 --------TERLPTQTKLKSLLS 105
RLP Q L++
Sbjct: 62 TPIYSPDMPSRLPIQDIFAGLVT 84
>sp|Q6ZQ89|MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 OS=Mus musculus GN=March6 PE=2
SV=2
Length = 909
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 34 DDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFT- 90
D + ICR+C G ++ L C C GSI ++H EC+ +WL+ + C+LCK++F
Sbjct: 2 DTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAF 61
Query: 91 --------TERLPTQTKLKSLLS 105
RLP Q L++
Sbjct: 62 TPIYSPDMPSRLPIQDIFAGLVT 84
>sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1
SV=2
Length = 910
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 34 DDEDMTICRICY--GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFT- 90
D + ICR+C G ++ L C C GSI ++H EC+ +WL+ + C+LCK++F
Sbjct: 2 DTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAF 61
Query: 91 --------TERLPTQTKLKSLLS 105
RLP Q L++
Sbjct: 62 TPIYSPDMPSRLPIQDIFAGLVT 84
>sp|A6NNE9|MARHB_HUMAN E3 ubiquitin-protein ligase MARCH11 OS=Homo sapiens GN=MARCH11 PE=2
SV=3
Length = 402
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 40 ICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQT 98
IC+IC+ GA+Q LL+ C+C GS+ Y H C+ +W+ E G C+LC Y++
Sbjct: 169 ICKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHV----IAI 224
Query: 99 KLKSLLSWVK-HVDNREDMEEMLTDFAATFLFSPFIILLTLSGYQTFSNNAI--RLDYYI 155
K+K W + E ++ + + FL + LL + FS A+ R D
Sbjct: 225 KMKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLL----WSAFSPYAVWQRKDILF 280
Query: 156 GITYS 160
I Y
Sbjct: 281 QICYG 285
>sp|Q0P496|MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 OS=Danio rerio GN=march4 PE=2
SV=1
Length = 421
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 40 ICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQT 98
+CRIC+ G +Q LLS C+C GS+ H C+ +W+ E G C+LC Y++ + T+
Sbjct: 142 LCRICFQGPEQGELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQVIAISTKN 201
Query: 99 KLK 101
L+
Sbjct: 202 PLQ 204
>sp|Q80TE3|MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 OS=Mus musculus GN=March4 PE=2
SV=3
Length = 409
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 32 SSDDEDM--TICRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQ 88
SS D M +CRIC+ G +Q LLS C+C GS+ H C+ +W+ E G C+LC Y+
Sbjct: 151 SSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYK 210
Query: 89 FTTERLPTQTKLK 101
+ + T+ L+
Sbjct: 211 YHVIAISTKNPLQ 223
>sp|Q86YJ5|MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 OS=Homo sapiens GN=MARCH9 PE=1
SV=2
Length = 346
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 41 CRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQTK 99
CRIC+ G +Q LLS C+C GS+ H C+ RW+ E G C+LC +++ + T+
Sbjct: 110 CRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNP 169
Query: 100 LK 101
L+
Sbjct: 170 LQ 171
>sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 OS=Mus musculus GN=March9 PE=2
SV=1
Length = 348
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 41 CRICY-GADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERLPTQTK 99
CRIC+ G +Q LLS C+C GS+ H C+ RW+ E G C+LC +++ + T+
Sbjct: 110 CRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKNP 169
Query: 100 LK 101
L+
Sbjct: 170 LQ 171
>sp|P40318|DOA10_YEAST ERAD-associated E3 ubiquitin-protein ligase DOA10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SSM4 PE=1
SV=1
Length = 1319
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 34 DDEDMTICRICYG-ADQQN-LLSICQCKGSIAYVHIECIERWLQECGVD--------KCD 83
D CRIC G A + N L C+C+GSI Y+H C+ W+ +D KCD
Sbjct: 32 DAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCD 91
Query: 84 LCKY--QFTT---ERLPTQTKLKSLLS 105
+C Y QF T E +P + LLS
Sbjct: 92 ICHYPIQFKTIYAENMPEKIPFSLLLS 118
>sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 OS=Bovine herpesvirus 4
(strain DN-599) GN=IE1 PE=3 SV=1
Length = 285
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 32 SSDDEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
SS DE+ C IC + C C G + Y H EC++ W+ G KC C+ +
Sbjct: 123 SSIDEEGKQCWICRDGESLPEARYCNCYGDLQYCHEECLKTWISMSGEKKCKFCQTPYKV 182
Query: 92 ERLPTQTKLKSLLSWVKHVDNR-------EDMEEMLTDFAATFLFSPFIILLTLSG-YQT 143
R Q LK L D+R M +L + A+F F +L+ L G Y T
Sbjct: 183 NR---QLSLKRGLPGYWDRDDRFVFIAGFIGMGTILAGWIASF----FYLLVVLCGKYFT 235
Query: 144 FSN-----NAIRLDYYIGITYSSTLEFEVPN-VRELTEY 176
+ + + + +G+ +S + F++ N +R+ Y
Sbjct: 236 YKDVMIVVGGLAIIQVVGLMFSLFMYFQIGNLLRQYINY 274
>sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7 OS=Rattus norvegicus GN=March7
PE=2 SV=1
Length = 692
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Query: 40 ICRICY--GADQQNLL-SICQCKGSIAYVHIECIERWLQEC--------GVDKCDLCK 86
+CRIC A NLL C+C GS+ YVH EC+++WLQ V C+LCK
Sbjct: 552 LCRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCK 609
>sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus musculus GN=March7 PE=2
SV=1
Length = 693
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 41 CRICY--GADQQNLL-SICQCKGSIAYVHIECIERWLQEC--------GVDKCDLCK 86
CRIC A NLL C+C GS+ YVH EC+++WLQ V C+LCK
Sbjct: 554 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCK 610
>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo sapiens GN=MARCH7 PE=1
SV=1
Length = 704
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
Query: 41 CRIC--YGADQQNLL-SICQCKGSIAYVHIECIERWLQEC--------GVDKCDLCKYQF 89
CRIC A NLL C+C GS+ YVH +C+++WLQ V C+LCK +
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKL 611
>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo abelii GN=MARCH7 PE=2
SV=1
Length = 707
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
Query: 41 CRIC--YGADQQNLL-SICQCKGSIAYVHIECIERWLQEC--------GVDKCDLCKYQF 89
CRIC A NLL C+C GS+ YVH +C+++WLQ V C+LCK +
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKL 611
>sp|Q5XIV2|MARHA_RAT Probable E3 ubiquitin-protein ligase MARCH10 OS=Rattus norvegicus
GN=March10 PE=2 SV=1
Length = 790
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 40 ICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQ---ECGVD-----KCDLCK 86
IC+I G+ LL C C GS+ +VH EC+++WL+ G D C++CK
Sbjct: 643 ICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMCK 697
>sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10 OS=Homo sapiens
GN=MARCH10 PE=2 SV=3
Length = 808
Score = 45.1 bits (105), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 40 ICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQ---ECGVD-----KCDLCK 86
IC+I G+ LL C C GS+ +VH EC+++WL+ G D C++CK
Sbjct: 661 ICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCK 715
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 18 KIFDKLMIQLDKPDSSDDEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQEC 77
KI K+ ++ K +++ED T C +C +D+++ L +C G A H+EC++ LQE
Sbjct: 165 KILKKIPVENTKACEAEEEDPTFCEVCGRSDREDRLLLCD--GCDAGYHMECLDPPLQEV 222
Query: 78 GVDK--CDLC 85
VD+ C C
Sbjct: 223 PVDEWFCPEC 232
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 43.5 bits (101), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 16 GTKIFDKLMIQLDKPDSSDDEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQ 75
G KI K+ ++ K S ++ED T C +C +D+++ L +C G A H+EC++ LQ
Sbjct: 162 GGKILRKIPVENTKA-SEEEEDPTFCEVCGRSDREDRLLLCD--GCDAGYHMECLDPPLQ 218
Query: 76 ECGVDK--CDLC 85
E VD+ C C
Sbjct: 219 EVPVDEWFCPEC 230
>sp|Q6NYK8|MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 OS=Danio rerio GN=march5 PE=2
SV=1
Length = 289
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 34 DDEDMTICRICYGADQQN----LLSICQCKGSIAYVHIECIERWLQE------CGVDKCD 83
D+ C +C+ ++++ +S C+CKG ++H C++RWL E G C
Sbjct: 5 DEPPEKHCWVCFATEKEDRAAEWVSPCRCKGCTKWIHQSCLQRWLDEKQKGNSGGAVSCP 64
Query: 84 LCKYQF 89
C ++
Sbjct: 65 QCGTEY 70
>sp|O41933|MIR1_MHV68 E3 ubiquitin-protein ligase MIR1 OS=Murid herpesvirus 4 GN=K3 PE=1
SV=1
Length = 201
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 35 DEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTTERL 94
D C IC+ + L C CKGS A H +C+ WL+ C LC ++
Sbjct: 2 DSTGEFCWICH-QPEGPLKRFCGCKGSCAVSHQDCLRGWLETSRRQTCALCGTPYS---- 56
Query: 95 PTQTKLKSLLSWVKHVDNREDMEEMLTDFAA--TFLFSPFIILLTLSGYQTFSNN 147
+ K K L W EE+L A + P +L+ + G N+
Sbjct: 57 -MKWKTKPLREWT------WGEEEVLAAMEACLPLVLIPLAVLMIVMGTWLLVNH 104
>sp|P90495|MIR1_HHV8P E3 ubiquitin-protein ligase MIR1 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K3 PE=1 SV=1
Length = 333
Score = 37.0 bits (84), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 34 DDEDMTICRICYGADQQNLLSICQCKGSIAYVHIECIERWLQECGVDKCDLCKYQFTT 91
+DED+ +C IC C C G + VH C+ WL C +C + T
Sbjct: 2 EDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59
>sp|Q6GM44|MARH5_XENLA E3 ubiquitin-protein ligase MARCH5 OS=Xenopus laevis GN=march5
PE=2 SV=1
Length = 283
Score = 36.6 bits (83), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 41 CRICYGADQQN----LLSICQCKGSIAYVHIECIERWLQE 76
C +C+ D+ + + C+C+GS +VH C++RW+ E
Sbjct: 17 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDE 56
>sp|Q3KNM2|MARH5_MOUSE E3 ubiquitin-protein ligase MARCH5 OS=Mus musculus GN=March5 PE=2
SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 41 CRICYGADQQN----LLSICQCKGSIAYVHIECIERWLQE 76
C +C+ D+ + + C+C+GS +VH C++RW+ E
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDE 53
>sp|Q9NX47|MARH5_HUMAN E3 ubiquitin-protein ligase MARCH5 OS=Homo sapiens GN=MARCH5 PE=1
SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 41 CRICYGADQQN----LLSICQCKGSIAYVHIECIERWLQE 76
C +C+ D+ + + C+C+GS +VH C++RW+ E
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDE 53
>sp|Q0X0A5|MARH5_CHLAE E3 ubiquitin-protein ligase MARCH5 OS=Chlorocebus aethiops
GN=MARCH5 PE=2 SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 41 CRICYGADQQN----LLSICQCKGSIAYVHIECIERWLQE 76
C +C+ D+ + + C+C+GS +VH C++RW+ E
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDE 53
>sp|Q3ZC24|MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5 OS=Bos taurus GN=MARCH5 PE=2
SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 41 CRICYGADQQN----LLSICQCKGSIAYVHIECIERWLQE 76
C +C+ D+ + + C+C+GS +VH C++RW+ E
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDE 53
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,927,229
Number of Sequences: 539616
Number of extensions: 2375917
Number of successful extensions: 5392
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5320
Number of HSP's gapped (non-prelim): 86
length of query: 177
length of database: 191,569,459
effective HSP length: 110
effective length of query: 67
effective length of database: 132,211,699
effective search space: 8858183833
effective search space used: 8858183833
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)