Query psy3118
Match_columns 227
No_of_seqs 230 out of 2340
Neff 10.2
Searched_HMMs 46136
Date Fri Aug 16 16:53:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0615|consensus 100.0 6.3E-38 1.4E-42 247.1 11.1 196 3-206 168-382 (475)
2 KOG0595|consensus 100.0 7.7E-38 1.7E-42 246.4 11.4 200 4-211 7-220 (429)
3 KOG0575|consensus 100.0 6.1E-35 1.3E-39 240.0 13.7 202 7-218 18-231 (592)
4 KOG0598|consensus 100.0 1.6E-34 3.4E-39 225.4 10.0 205 6-220 24-240 (357)
5 KOG0592|consensus 100.0 2E-33 4.2E-38 228.4 12.0 144 6-153 72-227 (604)
6 KOG0600|consensus 100.0 6.5E-33 1.4E-37 223.7 10.4 195 6-208 116-323 (560)
7 KOG0605|consensus 100.0 1.2E-32 2.7E-37 223.5 12.2 215 6-226 140-409 (550)
8 KOG0667|consensus 100.0 2.2E-32 4.9E-37 226.8 13.0 189 3-201 182-385 (586)
9 KOG1163|consensus 100.0 8.4E-33 1.8E-37 205.0 9.0 146 3-148 11-162 (341)
10 KOG0583|consensus 100.0 3.4E-32 7.4E-37 221.7 13.3 205 4-216 14-234 (370)
11 KOG0659|consensus 100.0 2.4E-32 5.3E-37 204.7 9.8 198 7-215 2-216 (318)
12 KOG0593|consensus 100.0 1.9E-32 4.1E-37 208.9 9.3 196 7-214 2-215 (396)
13 KOG0611|consensus 100.0 9E-33 2E-37 218.3 6.8 197 5-217 51-265 (668)
14 KOG0597|consensus 100.0 1.1E-32 2.3E-37 225.3 5.8 201 7-217 2-212 (808)
15 KOG0581|consensus 100.0 5E-31 1.1E-35 206.0 10.3 180 7-200 79-273 (364)
16 KOG0591|consensus 100.0 6.5E-33 1.4E-37 209.6 -1.0 201 8-217 20-240 (375)
17 KOG0616|consensus 100.0 4.6E-31 1E-35 200.6 8.0 183 7-201 44-238 (355)
18 KOG0663|consensus 100.0 6.8E-31 1.5E-35 202.7 8.0 186 4-201 73-275 (419)
19 KOG0658|consensus 100.0 5.2E-31 1.1E-35 205.5 7.3 185 8-206 25-227 (364)
20 KOG0032|consensus 100.0 6.5E-30 1.4E-34 208.5 12.5 190 5-201 33-235 (382)
21 KOG0599|consensus 100.0 8.5E-31 1.9E-35 197.6 6.7 198 7-213 17-237 (411)
22 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-30 1.6E-34 209.5 12.9 138 7-149 1-150 (363)
23 KOG0661|consensus 100.0 1.9E-31 4E-36 213.9 2.1 186 3-200 6-206 (538)
24 cd05629 STKc_NDR_like_fungal C 100.0 2E-29 4.4E-34 207.9 14.2 137 7-148 1-149 (377)
25 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-29 3.1E-34 207.8 13.2 137 7-148 1-149 (364)
26 cd05625 STKc_LATS1 Catalytic d 100.0 2.3E-29 5.1E-34 207.9 13.7 137 7-148 1-149 (382)
27 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.8E-29 8.2E-34 203.0 14.3 187 7-206 1-199 (333)
28 KOG0585|consensus 100.0 1.8E-29 4E-34 202.6 12.1 206 6-218 96-332 (576)
29 KOG4250|consensus 100.0 2E-30 4.3E-35 216.7 6.7 193 6-205 12-224 (732)
30 cd05598 STKc_LATS Catalytic do 100.0 4E-29 8.6E-34 206.1 13.7 137 7-148 1-149 (376)
31 cd05626 STKc_LATS2 Catalytic d 100.0 7.8E-29 1.7E-33 204.7 14.5 137 7-148 1-149 (381)
32 KOG0594|consensus 100.0 1.7E-29 3.6E-34 196.8 8.7 181 8-200 12-217 (323)
33 cd05612 STKc_PRKX_like Catalyt 100.0 3.3E-29 7.2E-34 199.8 10.6 182 7-200 1-194 (291)
34 PTZ00263 protein kinase A cata 100.0 1.3E-28 2.7E-33 199.7 14.1 184 6-201 17-212 (329)
35 KOG0198|consensus 100.0 3.2E-29 6.8E-34 197.7 9.7 142 7-151 17-169 (313)
36 KOG1165|consensus 100.0 4E-29 8.6E-34 193.1 9.9 213 3-222 24-286 (449)
37 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.1E-29 2E-33 202.0 12.3 138 7-149 1-150 (350)
38 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-28 4.8E-33 201.1 13.8 191 6-206 42-248 (370)
39 KOG0197|consensus 100.0 3.6E-29 7.8E-34 203.5 8.5 195 9-216 208-416 (468)
40 cd05627 STKc_NDR2 Catalytic do 100.0 1.9E-28 4.1E-33 201.0 12.8 137 7-148 1-149 (360)
41 KOG0694|consensus 100.0 4.8E-29 1E-33 207.8 9.1 186 6-200 367-564 (694)
42 PTZ00426 cAMP-dependent protei 100.0 3.3E-28 7.1E-33 198.0 13.5 184 6-201 29-225 (340)
43 cd05624 STKc_MRCK_beta Catalyt 100.0 3.9E-28 8.5E-33 197.0 13.8 188 7-201 1-205 (331)
44 KOG1989|consensus 100.0 3.1E-28 6.8E-33 207.9 13.4 142 6-150 36-196 (738)
45 cd05622 STKc_ROCK1 Catalytic d 100.0 4.5E-28 9.8E-33 199.4 13.8 202 6-217 42-259 (371)
46 KOG0580|consensus 100.0 1E-29 2.2E-34 188.1 3.3 187 6-206 21-223 (281)
47 KOG0588|consensus 100.0 1.6E-28 3.5E-33 203.9 10.7 189 7-206 12-213 (786)
48 cd05571 STKc_PKB Catalytic dom 100.0 5.8E-28 1.3E-32 195.4 13.7 180 13-201 1-192 (323)
49 cd05596 STKc_ROCK Catalytic do 100.0 7.3E-28 1.6E-32 198.2 13.9 192 6-207 42-249 (370)
50 KOG0033|consensus 100.0 5.7E-31 1.2E-35 195.7 -4.1 209 2-218 6-225 (355)
51 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.7E-28 1.2E-32 192.4 12.7 199 7-215 5-214 (288)
52 cd05597 STKc_DMPK_like Catalyt 100.0 1E-27 2.2E-32 194.5 14.3 191 7-205 1-208 (331)
53 cd05587 STKc_cPKC Catalytic do 100.0 8.3E-28 1.8E-32 194.5 13.6 185 8-200 1-197 (324)
54 cd05601 STKc_CRIK Catalytic do 100.0 4.3E-28 9.2E-33 196.6 11.6 139 7-149 1-151 (330)
55 cd05616 STKc_cPKC_beta Catalyt 100.0 9.3E-28 2E-32 194.2 13.5 190 8-206 1-202 (323)
56 KOG0660|consensus 100.0 2.1E-28 4.6E-33 190.6 9.3 194 4-211 19-234 (359)
57 cd05615 STKc_cPKC_alpha Cataly 100.0 8.6E-28 1.9E-32 194.4 13.2 190 8-206 1-202 (323)
58 PHA03212 serine/threonine kina 100.0 6.5E-28 1.4E-32 199.6 12.2 184 6-201 91-280 (391)
59 cd05585 STKc_YPK1_like Catalyt 100.0 1.5E-27 3.3E-32 192.0 13.1 178 15-201 1-190 (312)
60 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-27 2.4E-32 191.9 12.1 190 6-205 4-204 (303)
61 cd05593 STKc_PKB_gamma Catalyt 100.0 2E-27 4.3E-32 192.6 13.6 183 13-205 1-195 (328)
62 cd05588 STKc_aPKC Catalytic do 99.9 2.9E-27 6.3E-32 191.7 14.5 180 13-200 1-192 (329)
63 cd05591 STKc_nPKC_epsilon Cata 99.9 1.9E-27 4.2E-32 192.2 13.0 184 13-205 1-196 (321)
64 cd05595 STKc_PKB_beta Catalyti 99.9 2E-27 4.2E-32 192.3 13.0 180 13-201 1-192 (323)
65 cd05631 STKc_GRK4 Catalytic do 99.9 2.7E-27 5.9E-32 188.2 13.3 183 9-200 2-197 (285)
66 KOG4236|consensus 99.9 3.6E-28 7.9E-33 197.7 8.2 176 12-193 569-755 (888)
67 cd05592 STKc_nPKC_theta_delta 99.9 1.9E-27 4E-32 191.9 12.3 184 13-205 1-196 (316)
68 cd05590 STKc_nPKC_eta Catalyti 99.9 1.7E-27 3.8E-32 192.3 12.1 184 13-205 1-196 (320)
69 cd05623 STKc_MRCK_alpha Cataly 99.9 2.6E-27 5.5E-32 192.3 12.8 192 7-206 1-209 (332)
70 KOG0612|consensus 99.9 1.5E-28 3.3E-33 213.9 4.7 205 6-226 74-302 (1317)
71 cd05614 STKc_MSK2_N N-terminal 99.9 5.6E-27 1.2E-31 190.2 13.6 186 8-200 1-203 (332)
72 KOG0662|consensus 99.9 9.8E-28 2.1E-32 171.2 7.8 197 7-211 2-209 (292)
73 KOG0192|consensus 99.9 2.6E-27 5.6E-32 191.8 11.2 196 8-218 42-259 (362)
74 KOG0589|consensus 99.9 1.2E-27 2.6E-32 193.8 9.2 204 6-218 3-219 (426)
75 cd05620 STKc_nPKC_delta Cataly 99.9 5.7E-27 1.2E-31 189.0 12.6 184 13-205 1-196 (316)
76 cd05589 STKc_PKN Catalytic dom 99.9 7.8E-27 1.7E-31 188.8 13.2 183 9-200 1-197 (324)
77 cd07848 STKc_CDKL5 Catalytic d 99.9 1.1E-26 2.4E-31 184.7 13.6 192 7-206 1-202 (287)
78 PTZ00267 NIMA-related protein 99.9 6.4E-27 1.4E-31 198.4 12.8 192 7-205 67-271 (478)
79 cd07859 STKc_TDY_MAPK_plant Ca 99.9 4E-27 8.7E-32 191.3 11.1 192 8-206 1-209 (338)
80 cd05594 STKc_PKB_alpha Catalyt 99.9 8.1E-27 1.8E-31 188.8 12.4 132 13-149 1-145 (325)
81 cd07872 STKc_PCTAIRE2 Catalyti 99.9 1.1E-26 2.3E-31 186.8 12.7 195 6-210 5-210 (309)
82 cd05102 PTKc_VEGFR3 Catalytic 99.9 5.2E-27 1.1E-31 190.8 10.8 141 6-149 6-223 (338)
83 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.2E-26 2.5E-31 188.1 12.8 184 13-205 1-196 (327)
84 cd05604 STKc_SGK3 Catalytic do 99.9 1.2E-26 2.7E-31 187.7 12.9 180 13-201 1-193 (325)
85 cd05619 STKc_nPKC_theta Cataly 99.9 9.5E-27 2.1E-31 187.7 11.9 184 13-205 1-196 (316)
86 KOG1187|consensus 99.9 7.4E-27 1.6E-31 190.0 11.2 140 6-150 74-227 (361)
87 PTZ00036 glycogen synthase kin 99.9 1.3E-26 2.8E-31 194.6 13.0 190 6-206 65-272 (440)
88 cd07862 STKc_CDK6 Catalytic do 99.9 2.5E-26 5.5E-31 182.8 13.9 191 7-206 1-210 (290)
89 cd05618 STKc_aPKC_iota Catalyt 99.9 1.5E-26 3.2E-31 187.6 12.6 180 13-200 1-192 (329)
90 cd05584 STKc_p70S6K Catalytic 99.9 1.9E-26 4.1E-31 186.5 13.2 179 13-200 2-196 (323)
91 cd05582 STKc_RSK_N N-terminal 99.9 9.7E-27 2.1E-31 187.8 11.3 132 13-149 2-147 (318)
92 cd05575 STKc_SGK Catalytic dom 99.9 2.7E-26 5.8E-31 185.6 13.5 179 13-200 1-192 (323)
93 KOG0610|consensus 99.9 3.3E-27 7.1E-32 186.8 7.8 138 7-148 77-227 (459)
94 PRK13184 pknD serine/threonine 99.9 2E-26 4.3E-31 203.2 13.1 140 7-150 2-163 (932)
95 cd05602 STKc_SGK1 Catalytic do 99.9 3.3E-26 7.1E-31 185.3 13.2 180 13-201 1-193 (325)
96 cd05605 STKc_GRK4_like Catalyt 99.9 7.3E-26 1.6E-30 180.0 14.5 188 8-205 1-201 (285)
97 cd05570 STKc_PKC Catalytic dom 99.9 2.4E-26 5.3E-31 185.5 11.4 133 13-149 1-145 (318)
98 PTZ00283 serine/threonine prot 99.9 3.4E-26 7.4E-31 194.4 12.8 195 5-206 30-246 (496)
99 KOG0582|consensus 99.9 2.8E-26 6E-31 183.2 11.4 186 6-201 25-229 (516)
100 KOG0604|consensus 99.9 1.1E-27 2.5E-32 182.6 3.3 193 5-205 59-264 (400)
101 PHA03209 serine/threonine kina 99.9 5.1E-26 1.1E-30 186.4 13.3 182 6-200 65-252 (357)
102 cd06649 PKc_MEK2 Catalytic dom 99.9 5E-26 1.1E-30 184.6 13.0 189 6-206 4-203 (331)
103 PHA03211 serine/threonine kina 99.9 3.7E-26 7.9E-31 192.0 12.5 187 5-201 167-359 (461)
104 KOG0578|consensus 99.9 1.1E-26 2.4E-31 190.1 9.1 184 7-205 273-470 (550)
105 cd05603 STKc_SGK2 Catalytic do 99.9 5.5E-26 1.2E-30 183.6 13.1 180 13-201 1-193 (321)
106 cd05580 STKc_PKA Catalytic dom 99.9 9.5E-26 2.1E-30 179.7 13.9 182 7-200 1-194 (290)
107 cd05104 PTKc_Kit Catalytic dom 99.9 2.8E-26 6E-31 189.1 11.0 140 7-149 35-263 (375)
108 KOG0586|consensus 99.9 1.3E-26 2.8E-31 191.3 8.2 184 6-199 55-250 (596)
109 cd05064 PTKc_EphR_A10 Catalyti 99.9 3.7E-26 8E-31 179.9 10.4 140 6-149 4-156 (266)
110 cd07873 STKc_PCTAIRE1 Catalyti 99.9 9.1E-26 2E-30 180.7 12.7 192 7-207 6-207 (301)
111 KOG4717|consensus 99.9 3E-26 6.5E-31 186.2 9.7 189 5-205 16-219 (864)
112 KOG0194|consensus 99.9 1.3E-26 2.9E-31 190.9 7.8 200 7-219 157-377 (474)
113 cd07863 STKc_CDK4 Catalytic do 99.9 2.4E-25 5.3E-30 177.0 14.8 187 8-205 1-207 (288)
114 cd05106 PTKc_CSF-1R Catalytic 99.9 5E-26 1.1E-30 187.5 11.1 141 6-149 37-261 (374)
115 cd05586 STKc_Sck1_like Catalyt 99.9 5.8E-26 1.3E-30 184.2 11.2 131 15-149 1-145 (330)
116 KOG0607|consensus 99.9 1.7E-26 3.6E-31 177.8 7.2 139 9-148 79-227 (463)
117 cd07876 STKc_JNK2 Catalytic do 99.9 1.6E-25 3.5E-30 183.6 13.6 189 4-205 18-222 (359)
118 cd07868 STKc_CDK8 Catalytic do 99.9 8.5E-26 1.8E-30 182.1 11.6 187 12-200 6-212 (317)
119 cd05096 PTKc_DDR1 Catalytic do 99.9 6.4E-26 1.4E-30 181.8 10.6 140 6-149 4-187 (304)
120 cd06650 PKc_MEK1 Catalytic dom 99.9 8.9E-26 1.9E-30 183.3 11.5 185 5-200 3-198 (333)
121 cd05608 STKc_GRK1 Catalytic do 99.9 1.2E-25 2.5E-30 178.4 11.6 178 15-200 1-193 (280)
122 PHA03207 serine/threonine kina 99.9 1.3E-25 2.8E-30 186.2 12.2 187 5-201 90-284 (392)
123 cd07853 STKc_NLK Catalytic dom 99.9 7.4E-26 1.6E-30 186.4 9.8 190 8-206 1-206 (372)
124 KOG2345|consensus 99.9 7.1E-26 1.5E-30 168.6 8.6 143 4-150 18-179 (302)
125 cd07875 STKc_JNK1 Catalytic do 99.9 3.7E-25 8E-30 181.8 13.5 190 4-206 21-226 (364)
126 KOG1164|consensus 99.9 1.6E-24 3.5E-29 175.0 16.8 171 8-180 19-242 (322)
127 cd05632 STKc_GRK5 Catalytic do 99.9 9.4E-25 2E-29 173.6 15.0 138 8-149 1-151 (285)
128 cd07874 STKc_JNK3 Catalytic do 99.9 2.2E-25 4.9E-30 182.5 11.7 190 4-206 14-219 (355)
129 cd05105 PTKc_PDGFR_alpha Catal 99.9 2.8E-25 6E-30 184.3 12.2 141 6-149 36-286 (400)
130 cd06625 STKc_MEKK3_like Cataly 99.9 6.4E-25 1.4E-29 172.2 13.0 138 7-149 2-153 (263)
131 cd05088 PTKc_Tie2 Catalytic do 99.9 7.7E-25 1.7E-29 175.6 13.8 139 7-148 7-172 (303)
132 cd07878 STKc_p38beta_MAPK11 Ca 99.9 2.1E-25 4.5E-30 181.8 10.5 189 4-206 12-217 (343)
133 cd05630 STKc_GRK6 Catalytic do 99.9 8E-25 1.7E-29 174.0 13.7 138 8-149 1-151 (285)
134 cd08219 STKc_Nek3 Catalytic do 99.9 1.2E-24 2.6E-29 170.0 14.0 138 8-149 1-149 (255)
135 cd07870 STKc_PFTAIRE2 Catalyti 99.9 1.6E-24 3.6E-29 172.5 14.9 191 6-205 4-204 (291)
136 PTZ00284 protein kinase; Provi 99.9 5.9E-25 1.3E-29 186.1 13.0 192 6-206 128-346 (467)
137 cd05607 STKc_GRK7 Catalytic do 99.9 5.3E-25 1.2E-29 174.3 12.0 131 15-149 1-144 (277)
138 cd07839 STKc_CDK5 Catalytic do 99.9 3.4E-25 7.4E-30 175.8 10.6 189 8-205 1-201 (284)
139 KOG0668|consensus 99.9 4.1E-27 8.9E-32 173.7 -0.4 187 7-205 38-234 (338)
140 cd05109 PTKc_HER2 Catalytic do 99.9 6.2E-25 1.4E-29 174.0 11.5 144 1-149 1-158 (279)
141 cd07844 STKc_PCTAIRE_like Cata 99.9 7.7E-25 1.7E-29 174.4 12.0 140 6-149 4-152 (291)
142 cd06630 STKc_MEKK1 Catalytic d 99.9 2.7E-25 5.9E-30 174.8 9.3 139 8-150 1-154 (268)
143 cd05103 PTKc_VEGFR2 Catalytic 99.9 4E-25 8.7E-30 180.2 10.3 141 6-149 6-228 (343)
144 KOG0608|consensus 99.9 8.2E-26 1.8E-30 187.4 6.0 138 6-148 628-777 (1034)
145 cd05574 STKc_phototropin_like 99.9 1.3E-24 2.8E-29 175.2 12.7 138 7-148 1-151 (316)
146 cd06646 STKc_MAP4K5 Catalytic 99.9 5.6E-25 1.2E-29 173.0 10.3 142 3-149 5-155 (267)
147 cd06652 STKc_MEKK2 Catalytic d 99.9 2.8E-24 6.1E-29 168.9 14.1 188 7-200 2-205 (265)
148 cd07867 STKc_CDC2L6 Catalytic 99.9 8.4E-25 1.8E-29 176.2 11.4 187 12-200 6-212 (317)
149 cd05114 PTKc_Tec_Rlk Catalytic 99.9 1.4E-24 3E-29 169.9 12.2 138 7-149 4-149 (256)
150 cd08228 STKc_Nek6 Catalytic do 99.9 2.3E-24 4.9E-29 169.5 13.1 187 7-201 2-203 (267)
151 PLN00034 mitogen-activated pro 99.9 3.3E-25 7.2E-30 181.3 8.6 181 7-200 74-269 (353)
152 cd08529 STKc_FA2-like Catalyti 99.9 5.1E-24 1.1E-28 166.4 14.9 185 8-200 1-197 (256)
153 cd05053 PTKc_FGFR Catalytic do 99.9 3.3E-24 7.2E-29 170.9 14.0 141 6-149 11-181 (293)
154 KOG0193|consensus 99.9 1.2E-24 2.5E-29 179.6 11.5 134 7-148 392-536 (678)
155 cd07832 STKc_CCRK Catalytic do 99.9 3.6E-24 7.8E-29 169.9 13.8 189 8-205 1-201 (286)
156 cd08221 STKc_Nek9 Catalytic do 99.9 4.9E-24 1.1E-28 166.6 14.3 138 8-149 1-150 (256)
157 cd05610 STKc_MASTL Catalytic d 99.9 3.3E-24 7.1E-29 188.1 14.7 139 7-150 4-154 (669)
158 KOG0577|consensus 99.9 1.1E-25 2.5E-30 185.3 5.2 186 8-210 27-231 (948)
159 PTZ00266 NIMA-related protein 99.9 3.1E-24 6.7E-29 190.3 14.6 191 4-200 10-239 (1021)
160 cd05578 STKc_Yank1 Catalytic d 99.9 1.7E-24 3.8E-29 169.4 11.7 138 8-150 1-150 (258)
161 cd05052 PTKc_Abl Catalytic dom 99.9 1.4E-24 3E-29 170.6 11.1 139 7-149 6-153 (263)
162 PF00069 Pkinase: Protein kina 99.9 1.6E-25 3.4E-30 175.2 5.7 135 9-148 1-146 (260)
163 cd06654 STKc_PAK1 Catalytic do 99.9 2.3E-24 4.9E-29 172.3 12.4 138 6-149 19-165 (296)
164 cd06615 PKc_MEK Catalytic doma 99.9 3.3E-24 7.2E-29 172.3 13.4 181 7-200 1-194 (308)
165 cd05108 PTKc_EGFR Catalytic do 99.9 1.5E-24 3.2E-29 174.9 11.0 141 5-150 5-159 (316)
166 cd07855 STKc_ERK5 Catalytic do 99.9 1.1E-24 2.3E-29 177.1 10.2 195 4-205 2-212 (334)
167 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.3E-24 2.9E-29 180.2 10.9 140 7-149 37-288 (401)
168 cd05066 PTKc_EphR_A Catalytic 99.9 1.5E-24 3.3E-29 170.7 10.7 140 6-149 3-155 (267)
169 cd06656 STKc_PAK3 Catalytic do 99.9 1.7E-24 3.7E-29 173.1 11.2 138 6-149 18-164 (297)
170 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 1.6E-24 3.5E-29 172.0 11.0 137 9-149 6-158 (284)
171 cd05033 PTKc_EphR Catalytic do 99.9 3.3E-24 7.1E-29 168.7 12.4 141 6-150 3-156 (266)
172 cd05057 PTKc_EGFR_like Catalyt 99.9 2.8E-24 6.1E-29 170.2 12.0 145 1-150 1-159 (279)
173 cd07845 STKc_CDK10 Catalytic d 99.9 6.5E-24 1.4E-28 170.6 14.1 192 4-205 4-209 (309)
174 KOG1152|consensus 99.9 2.4E-24 5.2E-29 176.9 11.6 138 7-148 561-718 (772)
175 KOG4279|consensus 99.9 4.1E-25 9E-30 185.0 7.3 184 14-202 582-776 (1226)
176 cd05609 STKc_MAST Catalytic do 99.9 4.6E-24 9.9E-29 171.2 13.2 137 7-148 1-149 (305)
177 cd06645 STKc_MAP4K3 Catalytic 99.9 7.3E-25 1.6E-29 172.4 8.3 139 6-149 8-155 (267)
178 cd06653 STKc_MEKK3_like_1 Cata 99.9 7.9E-24 1.7E-28 166.3 14.1 192 7-205 2-209 (264)
179 cd07841 STKc_CDK7 Catalytic do 99.9 1.7E-24 3.7E-29 172.9 10.5 138 8-149 1-151 (298)
180 KOG1151|consensus 99.9 2.2E-26 4.8E-31 184.2 -0.5 146 4-151 460-624 (775)
181 cd05059 PTKc_Tec_like Catalyti 99.9 1.4E-24 3.1E-29 169.8 9.7 138 7-149 4-149 (256)
182 cd05084 PTKc_Fes Catalytic dom 99.9 2.2E-24 4.7E-29 168.3 10.7 133 13-149 1-143 (252)
183 KOG0596|consensus 99.9 7.3E-25 1.6E-29 179.1 8.2 142 6-152 360-511 (677)
184 cd06628 STKc_MAPKKK_Byr2_like 99.9 3.2E-24 7E-29 168.6 11.6 138 8-150 1-156 (267)
185 cd06644 STKc_STK10_LOK Catalyt 99.9 3.8E-24 8.3E-29 170.6 11.8 141 4-148 9-158 (292)
186 PTZ00024 cyclin-dependent prot 99.9 3.3E-24 7.1E-29 174.2 11.7 144 1-149 2-168 (335)
187 cd05071 PTKc_Src Catalytic dom 99.9 2.8E-24 6.1E-29 168.8 10.9 139 5-149 4-151 (262)
188 cd05068 PTKc_Frk_like Catalyti 99.9 5.3E-24 1.2E-28 167.0 12.4 140 6-150 5-153 (261)
189 cd06613 STKc_MAP4K3_like Catal 99.9 8.1E-24 1.7E-28 165.8 13.4 140 6-149 2-150 (262)
190 cd05083 PTKc_Chk Catalytic dom 99.9 3.1E-24 6.8E-29 167.6 11.0 136 7-149 6-149 (254)
191 cd05054 PTKc_VEGFR Catalytic d 99.9 1.7E-24 3.7E-29 176.1 9.8 141 6-149 6-222 (337)
192 KOG0201|consensus 99.9 7.8E-26 1.7E-30 180.2 1.8 138 6-148 12-159 (467)
193 cd05065 PTKc_EphR_B Catalytic 99.9 5.1E-24 1.1E-28 167.8 12.2 139 7-149 4-155 (269)
194 cd06611 STKc_SLK_like Catalyti 99.9 7.8E-25 1.7E-29 173.4 7.5 139 6-148 4-151 (280)
195 cd06655 STKc_PAK2 Catalytic do 99.9 8.3E-24 1.8E-28 169.1 13.5 138 7-150 19-165 (296)
196 cd08223 STKc_Nek4 Catalytic do 99.9 1.1E-23 2.5E-28 164.6 14.0 138 8-149 1-151 (257)
197 cd08218 STKc_Nek1 Catalytic do 99.9 1.8E-23 3.9E-28 163.4 15.1 139 8-150 1-151 (256)
198 cd07861 STKc_CDK1_euk Catalyti 99.9 5E-24 1.1E-28 169.1 12.1 185 8-201 1-199 (285)
199 cd07842 STKc_CDK8_like Catalyt 99.9 3.1E-24 6.8E-29 172.7 11.0 141 8-149 1-161 (316)
200 cd06632 STKc_MEKK1_plant Catal 99.9 3.4E-24 7.3E-29 167.5 10.8 137 8-149 1-151 (258)
201 cd05113 PTKc_Btk_Bmx Catalytic 99.9 2.7E-24 5.9E-29 168.3 10.3 138 7-149 4-149 (256)
202 cd06619 PKc_MKK5 Catalytic dom 99.9 6.1E-24 1.3E-28 168.4 12.3 134 7-149 1-144 (279)
203 cd08220 STKc_Nek8 Catalytic do 99.9 1.8E-23 3.8E-28 163.3 14.8 140 8-150 1-152 (256)
204 cd05090 PTKc_Ror1 Catalytic do 99.9 4.4E-24 9.5E-29 169.4 11.3 140 7-150 5-174 (283)
205 cd07865 STKc_CDK9 Catalytic do 99.9 8.7E-24 1.9E-28 169.6 13.1 140 6-149 11-168 (310)
206 cd06637 STKc_TNIK Catalytic do 99.9 2E-24 4.3E-29 170.3 9.3 141 6-149 5-160 (272)
207 cd05089 PTKc_Tie1 Catalytic do 99.9 5.4E-24 1.2E-28 170.2 11.8 139 7-148 2-167 (297)
208 cd05082 PTKc_Csk Catalytic dom 99.9 6.9E-24 1.5E-28 165.9 12.2 137 7-149 6-151 (256)
209 cd06626 STKc_MEKK4 Catalytic d 99.9 1.1E-23 2.4E-28 165.1 13.4 189 8-201 1-203 (264)
210 cd07847 STKc_CDKL1_4 Catalytic 99.9 8.2E-24 1.8E-28 167.9 12.7 188 7-205 1-201 (286)
211 cd05111 PTK_HER3 Pseudokinase 99.9 3.8E-24 8.3E-29 169.6 10.6 139 6-149 6-158 (279)
212 cd05101 PTKc_FGFR2 Catalytic d 99.9 3.5E-24 7.7E-29 171.7 10.1 142 6-150 14-187 (304)
213 cd07850 STKc_JNK Catalytic dom 99.9 1.1E-23 2.4E-28 172.3 13.2 185 4-200 13-213 (353)
214 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 7.4E-24 1.6E-28 168.2 11.8 141 6-150 3-158 (284)
215 cd06631 STKc_YSK4 Catalytic do 99.9 5.3E-24 1.2E-28 167.3 10.9 136 8-149 1-151 (265)
216 cd07854 STKc_MAPK4_6 Catalytic 99.9 6.4E-24 1.4E-28 173.1 11.5 194 4-205 2-219 (342)
217 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.7E-23 3.7E-28 164.4 13.6 139 7-149 2-155 (267)
218 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.2E-23 2.6E-28 165.9 12.8 137 8-149 2-157 (272)
219 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 7.2E-24 1.6E-28 168.4 11.5 139 7-149 1-152 (286)
220 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.3E-24 2.8E-29 170.4 7.1 139 6-149 5-153 (261)
221 cd06617 PKc_MKK3_6 Catalytic d 99.9 1.7E-23 3.7E-28 165.9 13.6 140 7-149 1-153 (283)
222 cd07849 STKc_ERK1_2_like Catal 99.9 5E-24 1.1E-28 173.3 10.8 140 4-149 2-155 (336)
223 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 6E-24 1.3E-28 168.7 10.9 138 6-149 2-156 (283)
224 cd05034 PTKc_Src_like Catalyti 99.9 1.8E-23 3.8E-28 163.9 13.3 140 5-149 4-152 (261)
225 cd05097 PTKc_DDR_like Catalyti 99.9 4.8E-24 1E-28 170.3 10.2 190 6-206 4-234 (295)
226 cd07843 STKc_CDC2L1 Catalytic 99.9 6.9E-24 1.5E-28 169.1 10.9 191 6-206 4-208 (293)
227 cd05072 PTKc_Lyn Catalytic dom 99.9 8.4E-24 1.8E-28 165.8 11.2 139 6-149 5-152 (261)
228 cd05581 STKc_PDK1 Catalytic do 99.9 3.7E-24 7.9E-29 169.2 9.2 140 7-150 1-152 (280)
229 cd07857 STKc_MPK1 Catalytic do 99.9 1E-23 2.3E-28 171.1 12.1 193 8-206 1-211 (332)
230 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.4E-23 3E-28 164.5 12.4 140 4-149 3-151 (260)
231 cd07846 STKc_CDKL2_3 Catalytic 99.9 6.5E-24 1.4E-28 168.5 10.6 189 7-206 1-202 (286)
232 cd08225 STKc_Nek5 Catalytic do 99.9 1.2E-23 2.6E-28 164.4 11.8 140 8-150 1-152 (257)
233 cd06612 STKc_MST1_2 Catalytic 99.9 4.7E-24 1E-28 166.5 9.5 141 6-150 2-149 (256)
234 cd05062 PTKc_IGF-1R Catalytic 99.9 5.4E-24 1.2E-28 168.4 9.9 142 4-149 3-168 (277)
235 cd05100 PTKc_FGFR3 Catalytic d 99.9 1.1E-23 2.4E-28 171.1 11.9 141 6-149 11-183 (334)
236 cd06609 STKc_MST3_like Catalyt 99.9 8.2E-24 1.8E-28 167.1 10.9 184 7-200 1-194 (274)
237 cd08227 PK_STRAD_alpha Pseudok 99.9 4E-24 8.6E-29 173.2 9.3 133 11-147 2-148 (327)
238 cd07831 STKc_MOK Catalytic dom 99.9 1.8E-23 3.8E-28 165.6 12.8 188 9-207 1-201 (282)
239 cd05048 PTKc_Ror Catalytic Dom 99.9 6.5E-24 1.4E-28 168.3 10.2 139 7-149 5-173 (283)
240 cd05613 STKc_MSK1_N N-terminal 99.9 1.2E-23 2.7E-28 167.4 11.8 138 8-149 1-154 (290)
241 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.6E-23 3.5E-28 168.7 12.5 142 6-150 11-184 (314)
242 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 9.4E-24 2E-28 165.1 10.9 135 13-149 1-157 (259)
243 cd06608 STKc_myosinIII_like Ca 99.9 1.5E-23 3.3E-28 165.2 12.0 141 6-149 5-162 (275)
244 cd05036 PTKc_ALK_LTK Catalytic 99.9 6.2E-24 1.3E-28 168.1 9.8 143 6-149 5-168 (277)
245 cd05055 PTKc_PDGFR Catalytic d 99.9 8.9E-24 1.9E-28 169.4 10.7 141 6-149 34-190 (302)
246 cd05039 PTKc_Csk_like Catalyti 99.9 1.6E-23 3.4E-28 163.8 11.9 139 6-150 5-152 (256)
247 cd07833 STKc_CDKL Catalytic do 99.9 2.8E-23 6E-28 165.0 13.4 138 7-149 1-149 (288)
248 cd05032 PTKc_InsR_like Catalyt 99.9 1.7E-23 3.7E-28 165.4 12.1 140 6-149 5-168 (277)
249 cd06610 STKc_OSR1_SPAK Catalyt 99.9 1.6E-23 3.4E-28 164.5 11.7 139 7-149 1-151 (267)
250 cd05051 PTKc_DDR Catalytic dom 99.9 8E-24 1.7E-28 168.9 10.2 140 6-149 4-179 (296)
251 cd05042 PTKc_Aatyk Catalytic d 99.9 1E-23 2.2E-28 166.1 10.5 133 13-149 1-149 (269)
252 cd06638 STKc_myosinIIIA Cataly 99.9 2E-23 4.4E-28 165.8 12.2 142 5-149 16-173 (286)
253 cd06651 STKc_MEKK3 Catalytic d 99.9 2.8E-23 6E-28 163.4 12.9 138 7-149 2-155 (266)
254 cd07880 STKc_p38gamma_MAPK12 C 99.9 2.6E-23 5.7E-28 169.5 13.0 140 4-149 12-167 (343)
255 cd07836 STKc_Pho85 Catalytic d 99.9 2E-23 4.3E-28 165.6 12.0 137 8-148 1-148 (284)
256 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.6E-23 3.4E-28 168.3 11.4 141 6-149 17-189 (307)
257 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 1.3E-23 2.7E-28 164.8 10.7 139 5-149 4-151 (260)
258 cd05095 PTKc_DDR2 Catalytic do 99.9 1.9E-23 4E-28 167.0 11.8 140 6-149 4-179 (296)
259 cd00192 PTKc Catalytic domain 99.9 1.8E-23 4E-28 163.4 11.5 134 13-150 1-155 (262)
260 smart00219 TyrKc Tyrosine kina 99.9 1.7E-23 3.7E-28 163.4 11.2 137 9-149 1-152 (258)
261 cd06641 STKc_MST3 Catalytic do 99.9 3.3E-23 7.2E-28 163.9 13.0 136 8-149 5-150 (277)
262 cd05046 PTK_CCK4 Pseudokinase 99.9 1.4E-23 3.1E-28 165.8 10.8 138 7-148 5-165 (275)
263 cd06643 STKc_SLK Catalytic dom 99.9 1.6E-23 3.5E-28 166.1 11.2 138 8-149 6-152 (282)
264 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.1E-23 2.5E-28 165.7 10.1 140 6-149 4-156 (268)
265 KOG0574|consensus 99.9 3.5E-26 7.5E-31 175.1 -4.2 138 8-149 34-178 (502)
266 PHA02988 hypothetical protein; 99.9 1.9E-23 4.2E-28 166.0 11.3 180 13-208 26-225 (283)
267 cd05049 PTKc_Trk Catalytic dom 99.9 8.3E-24 1.8E-28 167.4 9.1 140 6-149 4-171 (280)
268 cd06647 STKc_PAK_I Catalytic d 99.9 2.2E-23 4.7E-28 166.4 11.6 138 6-149 18-164 (293)
269 cd08229 STKc_Nek7 Catalytic do 99.9 7.6E-24 1.7E-28 166.5 8.7 139 7-149 2-155 (267)
270 cd06605 PKc_MAPKK Catalytic do 99.9 1.6E-23 3.4E-28 164.5 10.5 139 7-149 1-150 (265)
271 cd06623 PKc_MAPKK_plant_like C 99.9 4E-23 8.6E-28 161.9 12.7 139 7-150 1-150 (264)
272 cd07860 STKc_CDK2_3 Catalytic 99.9 4.5E-23 9.8E-28 163.6 13.2 188 8-205 1-201 (284)
273 cd07866 STKc_BUR1 Catalytic do 99.9 3.6E-23 7.9E-28 166.1 12.7 140 6-149 7-164 (311)
274 cd07837 STKc_CdkB_plant Cataly 99.9 5.5E-23 1.2E-27 163.9 13.6 140 7-148 1-159 (295)
275 PHA03390 pk1 serine/threonine- 99.9 4.3E-23 9.3E-28 162.6 12.8 137 7-149 14-159 (267)
276 PLN00009 cyclin-dependent kina 99.9 4.4E-23 9.4E-28 164.6 13.0 191 7-205 2-204 (294)
277 PHA02882 putative serine/threo 99.9 2E-23 4.2E-28 166.8 10.9 195 3-205 8-233 (294)
278 cd05112 PTKc_Itk Catalytic dom 99.9 2.5E-23 5.4E-28 162.6 11.3 138 7-149 4-149 (256)
279 cd06639 STKc_myosinIIIB Cataly 99.9 5.7E-23 1.2E-27 163.7 13.6 142 5-149 20-177 (291)
280 cd06607 STKc_TAO Catalytic dom 99.9 6.9E-23 1.5E-27 164.5 14.1 184 5-200 13-210 (307)
281 cd05147 RIO1_euk RIO kinase fa 99.9 2.6E-23 5.7E-28 155.4 10.9 129 12-149 2-166 (190)
282 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.3E-23 2.9E-28 166.8 9.7 138 6-148 4-152 (284)
283 cd07834 STKc_MAPK Catalytic do 99.9 1.9E-23 4.2E-28 169.3 10.8 192 8-206 1-208 (330)
284 cd05061 PTKc_InsR Catalytic do 99.9 2.6E-23 5.5E-28 165.5 11.2 141 5-149 4-168 (288)
285 cd05115 PTKc_Zap-70 Catalytic 99.9 2.5E-23 5.4E-28 163.0 10.9 131 14-149 2-144 (257)
286 KOG0696|consensus 99.9 1.6E-24 3.5E-29 172.1 4.2 193 6-209 348-554 (683)
287 cd05075 PTKc_Axl Catalytic dom 99.9 1.8E-23 3.8E-28 164.9 10.1 138 9-150 1-162 (272)
288 cd05093 PTKc_TrkB Catalytic do 99.9 2E-23 4.4E-28 166.1 10.5 140 6-149 4-169 (288)
289 cd07858 STKc_TEY_MAPK_plant Ca 99.9 2.7E-23 5.7E-28 169.1 11.3 187 5-201 3-206 (337)
290 KOG0587|consensus 99.9 7.8E-23 1.7E-27 174.8 14.3 140 6-148 18-171 (953)
291 cd06636 STKc_MAP4K4_6 Catalyti 99.9 2.6E-23 5.7E-28 164.9 10.8 141 6-149 15-170 (282)
292 cd05122 PKc_STE Catalytic doma 99.9 1.1E-22 2.5E-27 157.9 14.2 140 8-151 1-149 (253)
293 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 2.1E-23 4.5E-28 165.3 10.2 140 7-150 4-159 (284)
294 cd07864 STKc_CDK12 Catalytic d 99.9 4.7E-23 1E-27 164.9 12.0 193 5-206 5-219 (302)
295 cd06624 STKc_ASK Catalytic dom 99.9 2.7E-23 5.8E-28 163.6 10.4 137 10-149 11-158 (268)
296 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 7.7E-24 1.7E-28 165.9 7.1 179 13-200 1-201 (258)
297 cd05056 PTKc_FAK Catalytic dom 99.9 4.7E-23 1E-27 162.4 11.6 139 6-149 5-156 (270)
298 cd05035 PTKc_Axl_like Catalyti 99.9 5.9E-23 1.3E-27 161.8 12.0 138 9-150 1-163 (273)
299 cd05069 PTKc_Yes Catalytic dom 99.9 4.7E-23 1E-27 161.6 11.4 138 6-149 5-151 (260)
300 KOG0670|consensus 99.9 1.1E-23 2.4E-28 171.3 7.9 201 4-216 429-649 (752)
301 cd05047 PTKc_Tie Catalytic dom 99.9 3.4E-23 7.5E-28 163.3 10.6 133 13-148 1-160 (270)
302 KOG1026|consensus 99.9 8E-24 1.7E-28 180.7 7.2 197 7-214 486-718 (774)
303 cd05058 PTKc_Met_Ron Catalytic 99.9 2.7E-23 5.8E-28 163.0 9.7 133 13-149 1-147 (262)
304 cd06627 STKc_Cdc7_like Catalyt 99.9 1.1E-22 2.4E-27 158.5 13.0 138 8-150 1-149 (254)
305 cd06917 STKc_NAK1_like Catalyt 99.9 3.6E-23 7.9E-28 163.6 10.1 138 8-150 2-151 (277)
306 KOG4645|consensus 99.9 1.5E-24 3.3E-29 191.4 2.4 189 6-200 1234-1437(1509)
307 cd05091 PTKc_Ror2 Catalytic do 99.9 1.3E-23 2.7E-28 166.7 7.5 139 7-149 5-173 (283)
308 cd05116 PTKc_Syk Catalytic dom 99.9 4.1E-23 8.9E-28 161.7 10.2 130 14-149 2-144 (257)
309 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 2.2E-23 4.8E-28 164.8 8.8 134 14-148 2-172 (274)
310 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 1.2E-22 2.6E-27 161.6 13.0 139 7-149 1-154 (287)
311 cd05572 STKc_cGK_PKG Catalytic 99.9 1.1E-22 2.3E-27 159.6 12.5 131 15-150 1-143 (262)
312 cd05611 STKc_Rim15_like Cataly 99.9 8.6E-23 1.9E-27 160.0 11.9 133 13-149 2-146 (260)
313 PRK09188 serine/threonine prot 99.9 6.7E-23 1.5E-27 166.2 11.5 132 4-151 15-163 (365)
314 PHA03210 serine/threonine kina 99.9 6.6E-24 1.4E-28 180.9 5.9 189 5-200 146-364 (501)
315 cd06640 STKc_MST4 Catalytic do 99.9 3.1E-23 6.7E-28 164.1 9.4 138 6-149 3-150 (277)
316 cd05110 PTKc_HER4 Catalytic do 99.9 4.3E-23 9.4E-28 165.4 10.3 141 5-150 5-159 (303)
317 cd08215 STKc_Nek Catalytic dom 99.9 8.9E-23 1.9E-27 159.1 11.9 138 8-149 1-152 (258)
318 cd06635 STKc_TAO1 Catalytic do 99.9 1.8E-22 3.9E-27 162.8 13.9 139 7-149 25-174 (317)
319 cd06659 STKc_PAK6 Catalytic do 99.9 2.9E-23 6.3E-28 166.0 9.2 134 9-148 23-165 (297)
320 cd07840 STKc_CDK9_like Catalyt 99.9 1.2E-22 2.6E-27 161.1 12.1 190 9-207 1-204 (287)
321 cd06614 STKc_PAK Catalytic dom 99.9 1.2E-22 2.5E-27 161.5 12.1 140 6-149 18-165 (286)
322 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.2E-23 2.6E-28 166.4 6.4 137 7-149 4-150 (277)
323 cd07852 STKc_MAPK15 Catalytic 99.9 8E-23 1.7E-27 166.2 11.3 192 3-200 3-209 (337)
324 cd05633 STKc_GRK3 Catalytic do 99.9 1.3E-22 2.9E-27 160.8 12.3 131 14-148 1-145 (279)
325 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1.5E-22 3.2E-27 164.1 12.6 183 4-200 7-202 (328)
326 cd08217 STKc_Nek2 Catalytic do 99.9 2.8E-22 6.1E-27 157.0 13.7 139 8-150 1-160 (265)
327 KOG1095|consensus 99.9 8.9E-23 1.9E-27 179.8 11.9 190 6-206 691-906 (1025)
328 cd06633 STKc_TAO3 Catalytic do 99.9 3.2E-22 7E-27 161.1 14.2 140 6-149 20-170 (313)
329 cd07877 STKc_p38alpha_MAPK14 C 99.9 1.7E-22 3.7E-27 164.8 12.8 184 4-201 14-215 (345)
330 cd05045 PTKc_RET Catalytic dom 99.9 5.2E-23 1.1E-27 163.9 9.5 138 8-149 1-176 (290)
331 cd05094 PTKc_TrkC Catalytic do 99.9 8.4E-23 1.8E-27 162.8 10.7 139 7-149 5-172 (291)
332 cd05073 PTKc_Hck Catalytic dom 99.9 1.9E-22 4.2E-27 158.1 12.6 139 5-149 4-151 (260)
333 cd05579 STKc_MAST_like Catalyt 99.9 6E-23 1.3E-27 160.8 9.7 129 15-148 1-141 (265)
334 cd05060 PTKc_Syk_like Catalyti 99.9 1.2E-22 2.6E-27 159.0 11.2 131 13-149 1-144 (257)
335 cd05583 STKc_MSK_N N-terminal 99.9 8.1E-23 1.8E-27 162.6 10.3 138 8-149 1-154 (288)
336 cd05577 STKc_GRK Catalytic dom 99.9 9.6E-23 2.1E-27 161.3 10.5 130 15-148 1-143 (277)
337 cd05085 PTKc_Fer Catalytic dom 99.9 1.2E-22 2.6E-27 158.2 10.8 131 13-148 1-141 (250)
338 KOG0666|consensus 99.9 3.1E-24 6.7E-29 164.8 1.8 184 7-198 24-234 (438)
339 KOG0690|consensus 99.9 4.3E-24 9.4E-29 165.1 2.5 139 6-149 167-317 (516)
340 KOG0671|consensus 99.9 9.3E-24 2E-28 165.8 4.4 178 3-183 85-294 (415)
341 cd05118 STKc_CMGC Catalytic do 99.9 1.1E-22 2.4E-27 161.0 10.6 188 9-206 1-200 (283)
342 cd05050 PTKc_Musk Catalytic do 99.9 6.2E-23 1.3E-27 163.2 8.9 139 6-148 4-178 (288)
343 cd08226 PK_STRAD_beta Pseudoki 99.9 7.8E-23 1.7E-27 165.7 9.5 130 13-146 4-147 (328)
344 cd06658 STKc_PAK5 Catalytic do 99.9 2.6E-23 5.7E-28 165.9 6.6 136 7-148 22-166 (292)
345 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.1E-22 2.5E-27 159.7 10.0 136 13-149 1-161 (262)
346 cd05092 PTKc_TrkA Catalytic do 99.9 9.3E-23 2E-27 161.7 9.4 140 6-149 4-171 (280)
347 cd07829 STKc_CDK_like Catalyti 99.9 1.9E-22 4.2E-27 159.6 10.9 194 9-212 1-206 (282)
348 cd05606 STKc_beta_ARK Catalyti 99.9 5.3E-22 1.2E-26 157.3 13.4 132 14-149 1-146 (278)
349 cd06606 STKc_MAPKKK Catalytic 99.9 2.9E-22 6.2E-27 156.3 11.6 138 8-150 1-151 (260)
350 cd05041 PTKc_Fes_like Catalyti 99.9 2.6E-22 5.7E-27 156.4 11.2 132 13-149 1-142 (251)
351 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 1.7E-22 3.8E-27 159.1 10.2 133 13-149 1-149 (269)
352 cd07879 STKc_p38delta_MAPK13 C 99.9 4.2E-22 9.1E-27 162.4 12.7 188 4-207 12-217 (342)
353 cd08528 STKc_Nek10 Catalytic d 99.9 4.4E-22 9.5E-27 156.7 12.3 140 8-150 1-164 (269)
354 cd05040 PTKc_Ack_like Catalyti 99.9 2.1E-22 4.5E-27 157.5 10.3 133 13-150 1-147 (257)
355 cd05043 PTK_Ryk Pseudokinase d 99.9 1.8E-22 4E-27 159.8 10.1 142 5-150 4-167 (280)
356 cd07835 STKc_CDK1_like Catalyt 99.9 4E-22 8.7E-27 158.1 11.9 187 9-205 1-200 (283)
357 cd07830 STKc_MAK_like Catalyti 99.9 3.8E-22 8.3E-27 158.1 11.8 188 9-206 1-200 (283)
358 KOG1035|consensus 99.9 3.5E-23 7.6E-28 182.0 6.0 139 6-149 478-746 (1351)
359 KOG4721|consensus 99.9 7.5E-23 1.6E-27 168.2 7.4 167 12-200 129-307 (904)
360 KOG0986|consensus 99.9 1.4E-23 2.9E-28 168.3 2.9 186 5-200 183-382 (591)
361 cd07851 STKc_p38 Catalytic dom 99.9 1.7E-22 3.7E-27 164.7 9.4 139 5-149 13-167 (343)
362 cd08530 STKc_CNK2-like Catalyt 99.9 6.6E-22 1.4E-26 154.3 12.2 139 8-150 1-153 (256)
363 cd05145 RIO1_like RIO kinase f 99.9 5.8E-22 1.3E-26 148.5 11.2 130 12-151 2-168 (190)
364 cd07838 STKc_CDK4_6_like Catal 99.9 1.3E-21 2.9E-26 155.2 13.9 187 9-206 1-207 (287)
365 cd06618 PKc_MKK7 Catalytic dom 99.9 1E-21 2.2E-26 156.9 13.2 140 6-148 14-163 (296)
366 KOG0579|consensus 99.9 7E-24 1.5E-28 176.3 0.6 183 7-202 32-233 (1187)
367 cd05086 PTKc_Aatyk2 Catalytic 99.9 8.4E-22 1.8E-26 155.3 12.2 131 14-148 2-147 (268)
368 cd06648 STKc_PAK_II Catalytic 99.9 8.1E-22 1.8E-26 156.7 12.2 135 8-148 20-163 (285)
369 cd06616 PKc_MKK4 Catalytic dom 99.9 2.3E-22 5E-27 159.9 9.1 139 7-148 4-156 (288)
370 cd06634 STKc_TAO2 Catalytic do 99.9 6.4E-22 1.4E-26 159.0 11.2 140 6-149 14-164 (308)
371 cd06657 STKc_PAK4 Catalytic do 99.9 5.9E-22 1.3E-26 158.1 10.9 133 10-148 23-164 (292)
372 KOG3653|consensus 99.9 3.8E-23 8.3E-28 166.3 3.7 185 8-203 211-423 (534)
373 KOG0603|consensus 99.9 2.5E-22 5.5E-27 166.8 8.2 185 4-201 319-510 (612)
374 KOG4257|consensus 99.9 1.5E-22 3.3E-27 167.9 6.7 185 9-206 391-594 (974)
375 KOG1167|consensus 99.9 1.5E-22 3.3E-27 160.7 6.4 138 5-148 34-181 (418)
376 cd05123 STKc_AGC Catalytic dom 99.9 9.9E-22 2.2E-26 152.9 10.7 130 15-149 1-142 (250)
377 KOG1290|consensus 99.9 1.3E-21 2.7E-26 158.2 11.4 131 3-133 73-224 (590)
378 cd05044 PTKc_c-ros Catalytic d 99.9 5.4E-22 1.2E-26 156.2 9.0 136 13-149 1-160 (269)
379 KOG0669|consensus 99.9 1.2E-24 2.7E-29 162.7 -5.8 193 5-201 15-226 (376)
380 cd08222 STKc_Nek11 Catalytic d 99.9 4.7E-22 1E-26 155.8 8.3 137 8-149 1-154 (260)
381 KOG0196|consensus 99.9 1.5E-22 3.2E-27 171.4 4.8 188 8-205 630-835 (996)
382 KOG1094|consensus 99.9 4.5E-22 9.7E-27 163.9 6.8 191 7-209 538-745 (807)
383 cd05576 STKc_RPK118_like Catal 99.9 2.3E-21 5E-26 150.1 10.4 123 18-148 4-133 (237)
384 KOG0614|consensus 99.9 5E-24 1.1E-28 172.9 -4.8 206 8-224 421-638 (732)
385 KOG0695|consensus 99.9 2.1E-22 4.6E-27 156.6 4.3 141 6-150 249-401 (593)
386 KOG0983|consensus 99.9 1.4E-22 3E-27 153.4 3.0 184 9-200 94-290 (391)
387 KOG0199|consensus 99.9 1.6E-22 3.4E-27 169.6 3.2 197 7-214 110-328 (1039)
388 PF07714 Pkinase_Tyr: Protein 99.9 3.6E-21 7.8E-26 151.0 10.5 137 10-150 2-153 (259)
389 cd05074 PTKc_Tyro3 Catalytic d 99.9 3.2E-21 7E-26 152.0 9.7 137 9-149 1-162 (273)
390 PRK10359 lipopolysaccharide co 99.8 1.1E-20 2.4E-25 143.4 11.8 137 2-150 26-184 (232)
391 PRK10345 hypothetical protein; 99.8 1.6E-20 3.6E-25 141.8 11.9 129 12-147 7-156 (210)
392 PLN00113 leucine-rich repeat r 99.8 1.1E-20 2.3E-25 173.0 13.0 119 8-133 691-819 (968)
393 KOG0584|consensus 99.8 2.7E-22 5.8E-27 166.3 2.3 159 7-175 39-215 (632)
394 cd08216 PK_STRAD Pseudokinase 99.8 4.1E-21 8.9E-26 154.6 9.0 126 19-148 12-149 (314)
395 KOG4278|consensus 99.8 1.3E-21 2.9E-26 162.5 5.5 182 8-201 268-463 (1157)
396 PLN03224 probable serine/threo 99.8 3.6E-20 7.8E-25 156.3 13.3 141 6-149 144-358 (507)
397 KOG2052|consensus 99.8 3.7E-20 8.1E-25 148.2 12.1 136 4-148 208-364 (513)
398 PLN03225 Serine/threonine-prot 99.8 3.2E-20 6.9E-25 159.7 11.8 137 6-149 131-305 (566)
399 KOG1006|consensus 99.8 1.4E-21 3E-26 147.4 2.3 183 10-200 67-265 (361)
400 smart00221 STYKc Protein kinas 99.8 8.8E-20 1.9E-24 139.4 11.5 200 9-217 1-214 (225)
401 KOG0576|consensus 99.8 2E-21 4.4E-26 162.1 2.0 194 6-208 14-219 (829)
402 KOG1027|consensus 99.8 7.2E-21 1.6E-25 162.1 3.7 140 9-151 511-662 (903)
403 smart00090 RIO RIO-like kinase 99.8 1.3E-19 2.8E-24 139.9 10.0 133 8-149 29-197 (237)
404 KOG1025|consensus 99.8 7.5E-21 1.6E-25 162.0 3.3 194 8-213 697-909 (1177)
405 cd00180 PKc Catalytic domain o 99.8 6.7E-19 1.5E-23 132.6 13.6 133 15-150 1-143 (215)
406 KOG0665|consensus 99.8 2.9E-20 6.3E-25 143.3 6.1 197 4-217 14-233 (369)
407 PRK12274 serine/threonine prot 99.8 9.1E-19 2E-23 130.6 11.4 131 9-152 4-144 (218)
408 KOG0664|consensus 99.8 7.2E-21 1.6E-25 144.3 -1.0 179 9-200 55-254 (449)
409 PRK14879 serine/threonine prot 99.8 2.4E-18 5.2E-23 130.9 11.8 129 13-153 2-147 (211)
410 KOG0984|consensus 99.8 2.4E-19 5.2E-24 130.8 5.9 140 8-150 47-199 (282)
411 KOG1345|consensus 99.8 1.1E-19 2.4E-24 137.6 3.4 145 3-150 20-173 (378)
412 TIGR03724 arch_bud32 Kae1-asso 99.8 4.3E-18 9.2E-23 128.4 10.8 131 14-155 1-144 (199)
413 smart00220 S_TKc Serine/Threon 99.8 2.9E-18 6.3E-23 132.2 9.4 127 19-150 1-137 (244)
414 KOG1165|consensus 99.8 2E-18 4.3E-23 134.2 8.3 96 129-224 45-140 (449)
415 KOG0200|consensus 99.8 3E-18 6.5E-23 148.9 10.2 189 9-206 298-523 (609)
416 PRK09605 bifunctional UGMP fam 99.7 1.3E-17 2.9E-22 143.3 11.5 135 8-158 334-485 (535)
417 KOG1163|consensus 99.7 7.5E-18 1.6E-22 125.8 8.4 93 127-219 30-122 (341)
418 cd05144 RIO2_C RIO kinase fami 99.7 1.5E-17 3.3E-22 125.4 10.1 130 9-150 17-175 (198)
419 KOG1166|consensus 99.7 3.9E-17 8.5E-22 144.4 9.7 140 6-148 697-849 (974)
420 PRK01723 3-deoxy-D-manno-octul 99.7 3.1E-16 6.8E-21 121.3 13.4 132 13-152 37-194 (239)
421 cd05120 APH_ChoK_like Aminogly 99.7 7.1E-16 1.5E-20 110.6 12.2 138 11-161 2-150 (155)
422 cd05119 RIO RIO kinase family, 99.7 7.4E-16 1.6E-20 115.0 10.9 127 12-150 2-164 (187)
423 COG0515 SPS1 Serine/threonine 99.6 1.4E-14 3.1E-19 115.8 13.5 135 9-148 2-150 (384)
424 PRK04750 ubiB putative ubiquin 99.5 3.7E-15 8E-20 126.4 4.6 141 8-153 121-317 (537)
425 TIGR01982 UbiB 2-polyprenylphe 99.5 2.3E-14 4.9E-19 120.0 8.8 135 13-153 123-310 (437)
426 COG3642 Mn2+-dependent serine/ 99.5 1.6E-13 3.5E-18 99.4 11.2 138 13-161 2-152 (204)
427 cd05151 ChoK Choline Kinase (C 99.5 4.3E-13 9.3E-18 98.4 12.5 133 12-157 3-144 (170)
428 cd05146 RIO3_euk RIO kinase fa 99.4 4.5E-12 9.8E-17 94.4 11.2 127 12-148 2-172 (197)
429 PLN00181 protein SPA1-RELATED; 99.4 1.5E-13 3.4E-18 123.5 2.8 70 63-132 33-115 (793)
430 KOG3087|consensus 99.4 6.9E-12 1.5E-16 90.8 9.9 138 11-151 11-167 (229)
431 COG2112 Predicted Ser/Thr prot 99.3 5.1E-11 1.1E-15 85.9 10.2 131 10-153 25-160 (201)
432 KOG1024|consensus 99.2 1.8E-12 3.8E-17 103.4 0.7 186 6-202 283-496 (563)
433 KOG0603|consensus 99.2 2.9E-12 6.3E-17 107.5 0.9 177 14-206 1-192 (612)
434 KOG0590|consensus 99.2 8.8E-12 1.9E-16 107.9 3.2 135 10-149 321-469 (601)
435 PF14531 Kinase-like: Kinase-l 99.2 2.7E-10 5.9E-15 89.5 10.4 138 8-148 13-193 (288)
436 cd05154 ACAD10_11_like Acyl-Co 99.2 5.1E-10 1.1E-14 85.5 11.8 143 13-159 4-216 (223)
437 KOG1240|consensus 99.2 3.1E-12 6.8E-17 113.2 -0.7 189 8-212 24-246 (1431)
438 KOG4158|consensus 99.2 4E-11 8.7E-16 96.1 5.1 87 60-148 273-393 (598)
439 PF01163 RIO1: RIO1 family; I 99.1 5E-10 1.1E-14 83.1 9.0 117 22-149 1-155 (188)
440 PRK15123 lipopolysaccharide co 99.1 2.1E-09 4.5E-14 84.4 11.9 125 22-149 37-194 (268)
441 COG0478 RIO-like serine/threon 98.9 6.1E-09 1.3E-13 80.2 8.9 129 9-148 93-250 (304)
442 COG0661 AarF Predicted unusual 98.9 7.8E-09 1.7E-13 87.7 8.1 135 13-153 131-318 (517)
443 PF06293 Kdo: Lipopolysacchari 98.7 8.7E-08 1.9E-12 72.6 9.6 104 46-151 55-172 (206)
444 KOG0590|consensus 98.7 1.7E-09 3.7E-14 93.8 -0.5 142 6-150 19-175 (601)
445 KOG1235|consensus 98.7 9.9E-08 2.1E-12 81.0 9.7 138 13-154 167-359 (538)
446 PRK09902 hypothetical protein; 98.7 4.7E-07 1E-11 68.0 11.4 132 16-150 27-180 (216)
447 KOG0606|consensus 98.7 1.5E-08 3.2E-13 90.2 3.7 181 6-220 82-298 (1205)
448 KOG0601|consensus 98.7 2.3E-08 4.9E-13 84.0 4.5 139 5-145 112-268 (524)
449 KOG0601|consensus 98.5 6.5E-08 1.4E-12 81.4 4.0 126 7-133 265-402 (524)
450 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.3E-06 2.9E-11 67.1 10.2 138 13-158 7-191 (226)
451 KOG1164|consensus 98.5 1.9E-06 4.1E-11 69.9 11.5 88 138-225 45-139 (322)
452 COG1718 RIO1 Serine/threonine 98.5 3E-06 6.6E-11 64.9 10.7 126 12-148 53-214 (268)
453 KOG1243|consensus 98.4 6.3E-07 1.4E-11 76.7 6.6 163 23-200 27-199 (690)
454 PF10707 YrbL-PhoP_reg: PhoP r 98.4 8.1E-06 1.8E-10 61.2 11.6 126 12-143 6-165 (199)
455 PF06176 WaaY: Lipopolysacchar 98.4 2.8E-06 6.2E-11 64.2 8.9 134 4-148 28-182 (229)
456 cd05150 APH Aminoglycoside 3'- 98.3 2E-05 4.3E-10 61.3 12.8 138 15-158 6-202 (244)
457 PF13095 FTA2: Kinetochore Sim 98.3 2E-05 4.4E-10 58.9 11.4 121 7-146 37-205 (207)
458 smart00750 KIND kinase non-cat 98.2 2.1E-06 4.4E-11 63.1 4.7 95 87-201 1-101 (176)
459 PF01636 APH: Phosphotransfera 98.1 2.3E-05 5.1E-10 60.0 9.3 144 12-159 2-207 (239)
460 PRK09550 mtnK methylthioribose 98.0 0.00018 3.9E-09 59.8 13.4 74 12-87 31-116 (401)
461 PLN02876 acyl-CoA dehydrogenas 98.0 0.0001 2.3E-09 67.1 12.3 78 11-88 42-130 (822)
462 KOG2270|consensus 97.9 7.4E-05 1.6E-09 60.7 8.6 128 11-148 148-312 (520)
463 TIGR02721 ycfN_thiK thiamine k 97.8 0.00034 7.3E-09 54.8 11.0 136 15-160 4-186 (256)
464 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00018 4E-09 55.6 9.4 73 12-89 2-81 (235)
465 cd05153 HomoserineK_II Homoser 97.8 0.00023 5.1E-09 56.9 10.2 144 12-161 19-217 (296)
466 KOG2268|consensus 97.8 1.8E-05 4E-10 63.1 3.3 125 9-145 94-247 (465)
467 cd05157 ETNK_euk Ethanolamine 97.8 0.0016 3.5E-08 50.1 14.0 145 12-162 3-214 (235)
468 KOG3741|consensus 97.6 0.00051 1.1E-08 58.0 9.0 111 21-132 290-428 (655)
469 TIGR00938 thrB_alt homoserine 97.5 0.0037 8.1E-08 50.3 13.3 145 11-160 26-228 (307)
470 KOG0195|consensus 97.5 9.6E-06 2.1E-10 62.7 -1.7 105 10-117 193-308 (448)
471 KOG1023|consensus 97.5 0.00011 2.5E-09 62.0 4.3 90 57-150 2-99 (484)
472 TIGR01767 MTRK 5-methylthiorib 97.4 0.0032 6.8E-08 51.6 11.5 70 14-85 2-82 (370)
473 KOG1033|consensus 97.4 4.1E-05 8.9E-10 64.0 -0.1 70 77-149 330-405 (516)
474 PLN02756 S-methyl-5-thioribose 97.3 0.0092 2E-07 49.8 12.5 72 11-86 36-119 (418)
475 PRK10593 hypothetical protein; 97.2 0.0029 6.3E-08 50.8 9.3 80 10-91 17-102 (297)
476 cd05156 ChoK_euk Choline Kinas 97.2 0.015 3.2E-07 46.7 12.6 74 13-90 4-85 (302)
477 PRK05231 homoserine kinase; Pr 97.1 0.018 4E-07 46.5 13.2 144 12-161 27-229 (319)
478 PF12260 PIP49_C: Protein-kina 97.0 0.003 6.4E-08 47.2 6.9 90 50-147 7-109 (188)
479 PF03881 Fructosamin_kin: Fruc 96.8 0.033 7.1E-07 44.5 11.5 73 10-85 20-94 (288)
480 PLN02236 choline kinase 96.8 0.078 1.7E-06 43.5 13.8 145 12-162 41-244 (344)
481 PRK12396 5-methylribose kinase 96.7 0.016 3.4E-07 48.2 9.4 72 12-85 34-115 (409)
482 PF02958 EcKinase: Ecdysteroid 96.6 0.012 2.5E-07 47.1 7.7 48 117-164 215-265 (294)
483 cd05152 MPH2' Macrolide 2'-Pho 96.4 0.029 6.3E-07 44.5 9.0 40 116-157 184-224 (276)
484 COG3173 Predicted aminoglycosi 96.4 0.037 8.1E-07 44.7 9.4 43 115-160 196-239 (321)
485 PLN02421 phosphotransferase, a 96.3 0.15 3.2E-06 41.6 12.5 145 9-160 17-224 (330)
486 COG3001 Uncharacterized protei 95.6 0.22 4.8E-06 38.4 9.7 67 21-88 27-97 (286)
487 KOG0606|consensus 95.4 0.0026 5.6E-08 58.0 -1.2 134 7-145 804-949 (1205)
488 KOG1266|consensus 94.9 0.044 9.5E-07 44.2 4.4 70 62-131 126-212 (458)
489 PTZ00384 choline kinase; Provi 94.8 1.3 2.7E-05 37.1 12.9 73 12-89 55-136 (383)
490 KOG1236|consensus 94.7 0.052 1.1E-06 45.2 4.4 57 78-134 320-382 (565)
491 PF03109 ABC1: ABC1 family; I 94.3 0.013 2.7E-07 40.3 0.0 47 12-60 16-62 (119)
492 KOG1033|consensus 94.2 0.0058 1.3E-07 51.6 -2.1 68 5-73 47-117 (516)
493 PRK06148 hypothetical protein; 93.8 2.2 4.8E-05 40.4 13.6 77 13-91 31-122 (1013)
494 KOG0615|consensus 93.6 0.59 1.3E-05 38.9 8.3 87 131-220 191-288 (475)
495 cd07844 STKc_PCTAIRE_like Cata 93.5 1.8 3.9E-05 34.1 11.1 96 128-224 21-119 (291)
496 KOG0610|consensus 93.2 0.78 1.7E-05 38.2 8.5 94 129-223 94-194 (459)
497 PHA03209 serine/threonine kina 93.2 1.2 2.7E-05 36.5 10.0 93 127-224 81-173 (357)
498 cd07871 STKc_PCTAIRE3 Catalyti 93.2 2.2 4.8E-05 33.6 11.2 93 131-224 24-119 (288)
499 smart00587 CHK ZnF_C4 abd HLH 93.1 0.14 3E-06 38.4 3.9 49 115-163 118-169 (196)
500 cd07869 STKc_PFTAIRE1 Catalyti 93.0 2.5 5.4E-05 33.6 11.3 96 128-224 21-119 (303)
No 1
>KOG0615|consensus
Probab=100.00 E-value=6.3e-38 Score=247.06 Aligned_cols=196 Identities=23% Similarity=0.230 Sum_probs=160.6
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---------CCchhhHHHHHHHhcCCCCCCeeEEccc
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---------HPQLHIESKIYKLMQGGVGIPQIKWCGS 73 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---------~~~~~~E~~~l~~l~~~~~i~~~~~~~~ 73 (227)
-.+++.|.+.+.||+|+||.|-+|.++.||+.||||++.+... .....+|++||++|+ |||||++++++.
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFE 246 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeee
Confidence 4467889999999999999999999999999999999876421 123578999999998 999999999999
Q ss_pred cCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 74 EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 74 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
.+++.|+||||+ ||+|.|.+-. ++.+.+..-+.+++|++ +|++||+|||||| ||++..+...-..++.|||+
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv~-nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVVA-NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred cCCceEEEEEEecCccHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999 9999999887 57899999999999998 9999999999999 88888776667889999999
Q ss_pred cccCCCchhhHHHHHHhhccCCCC--CeeeeccccCCee-EEEeeccCCCHHHHHhHcCCCCC
Q psy3118 147 IKTRHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYN-VMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 147 ~~~~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~-~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
++... +..+.++++|||++ |.+.-.+....+. ..++|.+|+.|.-.+.+ -.||+
T Consensus 326 AK~~g-----~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG-~pPFS 382 (475)
T KOG0615|consen 326 AKVSG-----EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG-YPPFS 382 (475)
T ss_pred hhccc-----cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc-CCCcc
Confidence 98543 55677888999876 3433333333333 55788888887655554 34554
No 2
>KOG0595|consensus
Probab=100.00 E-value=7.7e-38 Score=246.41 Aligned_cols=200 Identities=25% Similarity=0.250 Sum_probs=158.5
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
..-++|.+.+.||+|+||+||+|+++.++..||||.+.... ..+.+..|+.+|+.++ |||||.++++...+++.|
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEE
Confidence 44578999999999999999999999999999999986653 2235778999999999 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCC---CeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIST---GEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~---~~~~~~~~~~~~~ 149 (227)
+||||| ||+|.++++. .+.+++.+++.++.|++ +|+++|||||||| |+++...... ...++.|||.++.
T Consensus 86 lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 999999 9999999998 56899999999999999 9999999999999 9999876333 5678999999987
Q ss_pred CCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHH
Q psy3118 150 RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVL 211 (227)
Q Consensus 150 ~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l 211 (227)
..+.. ....+.|++-+..+.---.......-++|.+|..+++...+ ..+|+..+-.
T Consensus 165 L~~~~-----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g-~~Pf~a~t~~ 220 (429)
T KOG0595|consen 165 LQPGS-----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTG-KPPFDAETPK 220 (429)
T ss_pred CCchh-----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhC-CCCccccCHH
Confidence 66432 33445666533222111122223345688889988887776 4566533333
No 3
>KOG0575|consensus
Probab=100.00 E-value=6.1e-35 Score=240.02 Aligned_cols=202 Identities=19% Similarity=0.185 Sum_probs=168.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec-----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
.+|+.++.||+|||+.||.+++..+|+.||+|++++. ...+.+.+|++|.+.|+ |||||+++.+|++.++.|+|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 5799999999999999999999999999999999763 34457899999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
+|+| .++|..+++. .+.+++++++.+++||+ +|+.+|||||||. |+++++ .-.+++.|||++....+..
T Consensus 97 LELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~---~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 97 LELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE---NMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EEecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC---cCcEEecccceeeeecCcc
Confidence 9999 9999999996 68999999999999999 9999999999999 999987 4569999999997543221
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHH
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLF 218 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~ 218 (227)
. --..++|||++-.+.-....+...-.++|.+|+.++.|.-+ .++|+-+++......|.
T Consensus 173 E----rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G-~PPFetk~vkety~~Ik 231 (592)
T KOG0575|consen 173 E----RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVG-RPPFETKTVKETYNKIK 231 (592)
T ss_pred c----ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhC-CCCcccchHHHHHHHHH
Confidence 1 12456788876444443455555667899999999999887 57787666655555443
No 4
>KOG0598|consensus
Probab=100.00 E-value=1.6e-34 Score=225.40 Aligned_cols=205 Identities=17% Similarity=0.173 Sum_probs=166.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.++|+++++||+|+||+|++++.+.+++.+|+|++++.. .......|..||.+++ ||.||.++..+++.+.+|+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEE
Confidence 467999999999999999999999999999999987653 2345788999999988 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|+||+ ||.|...+++ .+.|++..++.++.+|+ ||++||||||||| ||+++. .|.++++|||+++.....
T Consensus 103 Vld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~---~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE---QGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC---CCcEEEeccccchhcccC
Confidence 99999 9999999998 68899999999999988 9999999999999 999988 799999999998843221
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHHHH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLFLY 220 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~~~ 220 (227)
.+.. ....||+.+..+...-..+.....+-|.||..++|++.+ ..+|.-.....+.+.+...
T Consensus 179 ~~~t----~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G-~pPF~~~~~~~~~~~I~~~ 240 (357)
T KOG0598|consen 179 GDAT----RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTG-KPPFYAEDVKKMYDKILKG 240 (357)
T ss_pred CCcc----ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhC-CCCCcCccHHHHHHHHhcC
Confidence 1111 113455544333322233444556679999999999887 5778777777777776654
No 5
>KOG0592|consensus
Probab=100.00 E-value=2e-33 Score=228.38 Aligned_cols=144 Identities=21% Similarity=0.339 Sum_probs=132.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec-----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
-++|.+++.||.|+|++|++|+++.+++.||||++.+. .+.+.+.+|-++|..|.+||+|++|+..|++...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 35799999999999999999999999999999998654 3456788899999999889999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|+||+ +|+|.+++++. +.|++.+++.++.||+ +|++||||||||| ||+++. +++..+.|||.++...+.
T Consensus 152 vLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~---dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK---DGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC---CCcEEEeeccccccCChh
Confidence 99999 99999999994 8899999999999999 9999999999999 999988 789999999999877654
No 6
>KOG0600|consensus
Probab=100.00 E-value=6.5e-33 Score=223.66 Aligned_cols=195 Identities=17% Similarity=0.192 Sum_probs=153.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----chhhHHHHHHHhcCCCCCCeeEEccccC--cEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----QLHIESKIYKLMQGGVGIPQIKWCGSEG--DYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~~ 79 (227)
.+.|+.++.||+|+||.||+|++..+|+.||+|.++.+...+ -..|||.||++|. ||||+++.+...+. ..+|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCceEE
Confidence 346888899999999999999999999999999998765433 3678999999998 99999998887765 6899
Q ss_pred EEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 80 MVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 80 lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+|+||+..+|.-++....-.|++.++..+++|++ +|++||+|||||. |++++. .|..++.|||+++...+.
T Consensus 195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn---~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN---NGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcC---CCCEEeccccceeeccCC
Confidence 9999999999999987666899999999999999 9999999999999 888876 799999999999843332
Q ss_pred hhhHHHHHHhh-ccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHH
Q psy3118 154 LHIESKIYKLM-QGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLK 208 (227)
Q Consensus 154 ~~~e~~~y~~l-~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~ 208 (227)
.... |+.- ..-++=|.-...|.+.....+++|..|+.+.|||.+ ...|..+
T Consensus 272 ~~~~---~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g-kPI~~G~ 323 (560)
T KOG0600|consen 272 GSAP---YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG-KPILQGR 323 (560)
T ss_pred CCcc---cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC-CCCcCCc
Confidence 2111 1100 000000111223566666788999999999999987 3444333
No 7
>KOG0605|consensus
Probab=100.00 E-value=1.2e-32 Score=223.45 Aligned_cols=215 Identities=17% Similarity=0.175 Sum_probs=160.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.++|+++..||+|+||.||+|+.+.||..+|+|++++.. +...+..|-.+|.... .|.||++|..|++..++||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeEE
Confidence 468999999999999999999999999999999997753 3345778999999965 8999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||||+ ||++..++.. .+.|++..++.++.+++ +|+.|+||||||| |++++. +|..++.|||++......
T Consensus 219 iMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~---~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA---KGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC---CCCEeeccccccchhhhh
Confidence 99999 9999999998 68899999999998877 9999999999999 888887 899999999987421110
Q ss_pred hhhHH--------------------------------HHHHh-----------hccCCCCCeeeeccccCCeeEEEeecc
Q psy3118 154 LHIES--------------------------------KIYKL-----------MQGGVGIPQIKWCGSEGDYNVMVMELL 190 (227)
Q Consensus 154 ~~~e~--------------------------------~~y~~-----------l~g~~g~p~~~~~g~~~~~~~~vm~~l 190 (227)
...+. ..+.. ..|||-+..+.-.-..+.....+-|.|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 00000 00000 112221111111111122223445778
Q ss_pred CCCHHHHHhHcCCCCCHHHHHHHHHHHHHHhhhccc
Q psy3118 191 GPSLEDLFNFCSRRFSLKTVLLLADQLFLYNTRLCF 226 (227)
Q Consensus 191 g~~l~~l~~~~~~~f~~~~~l~l~~ql~~~~~~~~~ 226 (227)
|..+.|++-+. +||.-.+......+|.+|...+.|
T Consensus 375 G~ImyEmLvGy-PPF~s~tp~~T~rkI~nwr~~l~f 409 (550)
T KOG0605|consen 375 GCIMYEMLVGY-PPFCSETPQETYRKIVNWRETLKF 409 (550)
T ss_pred HHHHHHHHhCC-CCCCCCCHHHHHHHHHHHhhhccC
Confidence 88888877764 566666777777788888776654
No 8
>KOG0667|consensus
Probab=100.00 E-value=2.2e-32 Score=226.77 Aligned_cols=189 Identities=25% Similarity=0.262 Sum_probs=157.0
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCC-----CCCCeeEEccccCc
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGG-----VGIPQIKWCGSEGD 76 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~-----~~i~~~~~~~~~~~ 76 (227)
..+..||.+.+.||+|+||+|.+|.+..|++.||||+++... ...+...|+.+|..|+.| .|+|++++++...+
T Consensus 182 d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 182 DHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred ceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 345669999999999999999999999999999999996543 234567799999999833 58999999999999
Q ss_pred EEEEEEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 77 YNVMVMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 77 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+.+||+|.++.+|.++++.+ -..++...++.++.|++ ||+.||||+|||| ||+|.... ..+++++|||.+..
T Consensus 262 HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 262 HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSSCF 340 (586)
T ss_pred ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEecccccc
Confidence 99999999999999999986 35699999999999999 9999999999999 88887643 34899999998874
Q ss_pred CCCc--hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 150 RHPQ--LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 150 ~~~~--~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.... ....+.+|++++-..|.| ....++||.||+.+.||+.+.
T Consensus 341 ~~q~vytYiQSRfYRAPEVILGlp---------Y~~~IDmWSLGCIlAEL~tG~ 385 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVILGLP---------YDTAIDMWSLGCILAELFTGE 385 (586)
T ss_pred cCCcceeeeeccccccchhhccCC---------CCCccceeehhhhHHhHhcCc
Confidence 4433 456777887765444311 122489999999999999984
No 9
>KOG1163|consensus
Probab=99.98 E-value=8.4e-33 Score=204.98 Aligned_cols=146 Identities=58% Similarity=0.960 Sum_probs=139.9
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+++.++|.+++.||+|+||.+|+|....+|+.||||+.+.+...+.+..|..+...|++..+|+.+.+++.+.++..+||
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 56788999999999999999999999999999999999998999999999999999998899999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+.+|.||.|+++.+++.|+..+++.++-|++ +|.+++||||||| |++++-+..+.+..++|||+++
T Consensus 91 dLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 91 DLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 9999999999999989999999999999998 9999999999999 9999998888999999999875
No 10
>KOG0583|consensus
Probab=99.98 E-value=3.4e-32 Score=221.74 Aligned_cols=205 Identities=24% Similarity=0.215 Sum_probs=161.1
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----C---CCCchhhHHHHHHHhcCCCCCCeeEEccccCc
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----T---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD 76 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 76 (227)
...++|.+++.||+|+||.|+.|.+..++..||+|++.+. . ..+.+.+|+.+++++.+||||++++++.....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3466899999999999999999999999999999987654 1 23457789999999998999999999999999
Q ss_pred EEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..|+||||+ ||+|.+++.. .+++++.+++.++.|++ +|++||+|||||| |++++.+ .+..++.|||.+..
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~--~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN--EGNLKLSDFGLSAI 170 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC--CCCEEEeccccccc
Confidence 999999999 9999999999 78999999999999999 9999999999999 9999885 28999999998875
Q ss_pred CCCchhhHHHHHHhhccCCCCCeeeeccccCCe--eEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHH
Q psy3118 150 RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY--NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQ 216 (227)
Q Consensus 150 ~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~--~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~q 216 (227)
.. .+...+....|++.+....+......| ...++|.+|..|..+..+. -+|+-..+..+...
T Consensus 171 ~~----~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~-~PF~d~~~~~l~~k 234 (370)
T KOG0583|consen 171 SP----GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR-LPFDDSNVPNLYRK 234 (370)
T ss_pred cC----CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC-CCCCCccHHHHHHH
Confidence 42 122233444555544333333322212 2466899999988887763 45554444444443
No 11
>KOG0659|consensus
Probab=99.98 E-value=2.4e-32 Score=204.71 Aligned_cols=198 Identities=15% Similarity=0.121 Sum_probs=158.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.+|...+.||+|.||.||+|++..+|+.||||.++..+.. -...||+..|+.++ |+||+.+.+++...+...+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEEE
Confidence 5789999999999999999999999999999998765433 25788999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCeeeEEEeeccCCCeeeEEeeeccccCCCchh--
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKSVMVVGTNISTGEEVAIKLECIKTRHPQLH-- 155 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkpni~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 155 (227)
||+.-+|+.+++.....++..++..++.+++ +|++.|+||||||||++... +|..++.|||+++...+...
T Consensus 81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccchhccCCCCccc
Confidence 9999999999999878899999999999998 99999999999995555554 79999999999885433221
Q ss_pred ---hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc---CCCCCHHHHHHHHH
Q psy3118 156 ---IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC---SRRFSLKTVLLLAD 215 (227)
Q Consensus 156 ---~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~---~~~f~~~~~l~l~~ 215 (227)
.-+.+|+.++ ..+|........+||..|+.+.||+-+. +..-++.++..+..
T Consensus 159 ~~~V~TRWYRAPE--------LLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~ 216 (318)
T KOG0659|consen 159 THQVVTRWYRAPE--------LLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFR 216 (318)
T ss_pred ccceeeeeccChH--------HhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHH
Confidence 2233443322 1234444445678999999999998764 34445555554443
No 12
>KOG0593|consensus
Probab=99.98 E-value=1.9e-32 Score=208.92 Aligned_cols=196 Identities=17% Similarity=0.147 Sum_probs=156.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----chhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|+.+..+|+|+||.||+|+++.||+.||||......+.+ -..||+++|+.|+ |+|+|.+.++|...+.+++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEEe
Confidence 56888999999999999999999999999999875544433 4678999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC-Cc--
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH-PQ-- 153 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~-~~-- 153 (227)
|||..++.+.+......++...+..++.|++ +|++++||||||| ||++.. .|.++++|||.++... |.
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~---~gvvKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ---NGVVKLCDFGFARTLSAPGDN 157 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec---CCcEEeccchhhHhhcCCcch
Confidence 9998888888888777899999999999998 9999999999999 888876 7899999999988665 32
Q ss_pred --hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc---CCCCCHHHHHHHH
Q psy3118 154 --LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC---SRRFSLKTVLLLA 214 (227)
Q Consensus 154 --~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~---~~~f~~~~~l~l~ 214 (227)
+..-+.+|++++.-. |-+......++|.+|+.+.||+.+. +.+-++-+.-.|.
T Consensus 158 YTDYVATRWYRaPELLv--------GDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ 215 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLV--------GDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIR 215 (396)
T ss_pred hhhhhhhhhccChhhhc--------ccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHH
Confidence 233344555433222 2233334577899999999999874 4444444443333
No 13
>KOG0611|consensus
Probab=99.97 E-value=9e-33 Score=218.30 Aligned_cols=197 Identities=20% Similarity=0.204 Sum_probs=160.3
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
...||++.+.||+|+||.|-+|.+...|+.||||.++++.-. -.+.+|++||..|+ ||||+.+|++|++.+...
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDKIV 129 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCceEE
Confidence 345899999999999999999999999999999998775432 25789999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
+||||. +|.|.|++.. .+.+++.+++.+++||. +|.++++|||||. ||+++. ++..++.|||++....
T Consensus 130 ivMEYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~---N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ---NNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEEEecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC---CCCeeeeccchhhhhc-
Confidence 999999 9999999998 58899999999999998 9999999999999 999987 6789999999886322
Q ss_pred chhhHHHHHHhhccCCCC--C----eeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHH
Q psy3118 153 QLHIESKIYKLMQGGVGI--P----QIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQL 217 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~--p----~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql 217 (227)
...+++..+|.|-+ | .-|+.|++ ...|.||.-|+.|-.+ .-+|+...--.+..||
T Consensus 205 ----~~kfLqTFCGSPLYASPEIvNG~PY~GPE-----VDsWsLGvLLYtLVyG-tMPFDG~Dhk~lvrQI 265 (668)
T KOG0611|consen 205 ----DKKFLQTFCGSPLYASPEIVNGTPYKGPE-----VDSWSLGVLLYTLVYG-TMPFDGRDHKRLVRQI 265 (668)
T ss_pred ----cccHHHHhcCCcccCCccccCCCCCCCCc-----cchhhHHHHHHHHhhc-ccccCCchHHHHHHHh
Confidence 34455666665532 1 23455555 4557778777766554 4566666666666665
No 14
>KOG0597|consensus
Probab=99.97 E-value=1.1e-32 Score=225.28 Aligned_cols=201 Identities=17% Similarity=0.182 Sum_probs=164.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----chhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+..+.+ .+.+|++|+++|+ ||||+.++++|++..++|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEEe
Confidence 57999999999999999999999999999999997654332 4788999999999 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|||-|+|..++.. ++.++++.+..++.++. +|+.+|+|||+|| ||++.. .+..++.|||.++....
T Consensus 81 e~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~---~~~~KlcdFg~Ar~m~~---- 152 (808)
T KOG0597|consen 81 EYAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK---GGTLKLCDFGLARAMST---- 152 (808)
T ss_pred hhhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC---CCceeechhhhhhhccc----
Confidence 9995599999998 68999999999999988 9999999999999 999987 68899999999987654
Q ss_pred HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHH
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQL 217 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql 217 (227)
.....+.+.|+|-+..+...........-++|.+|+.++|+|.+. ++|--.++..+...|
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~-PPF~a~si~~Lv~~I 212 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQ-PPFYARSITQLVKSI 212 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCC-CCchHHHHHHHHHHH
Confidence 233344556666544333333333334567899999999999985 455445555555444
No 15
>KOG0581|consensus
Probab=99.97 E-value=5e-31 Score=205.97 Aligned_cols=180 Identities=20% Similarity=0.143 Sum_probs=144.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCc-EEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD-YNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~ 82 (227)
++.+.+..||+|..|+||+|.|+.|++.+|+|.+..+. ...++.+|++++++.+ +|+||.+|+.|..++ ...++|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEeeh
Confidence 36778899999999999999999999999999985432 2346889999999996 999999999999998 499999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----cc-ccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc-
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----IT-APGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ- 153 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh-~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~- 153 (227)
||| ||||.++++. .+++++.....++.+++ || +.+|||||||| |+++.. .|+++++|||-++..-..
T Consensus 158 EYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kGeVKicDFGVS~~lvnS~ 233 (364)
T KOG0581|consen 158 EYMDGGSLDDILKR-VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KGEVKICDFGVSGILVNSI 233 (364)
T ss_pred hhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CCCEEeccccccHHhhhhh
Confidence 999 9999999998 47899999999999999 89 49999999999 888877 799999999987643222
Q ss_pred --hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 154 --LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 154 --~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.-..+..|+.++-..| +.....-++|.||.++.|+..+
T Consensus 234 a~tfvGT~~YMsPERi~g---------~~Ys~~sDIWSLGLsllE~a~G 273 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISG---------ESYSVKSDIWSLGLSLLELAIG 273 (364)
T ss_pred cccccccccccChhhhcC---------CcCCcccceecccHHHHHHhhC
Confidence 2223334443322221 1112235689999999998876
No 16
>KOG0591|consensus
Probab=99.97 E-value=6.5e-33 Score=209.57 Aligned_cols=201 Identities=20% Similarity=0.177 Sum_probs=158.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEE-ccccCcE-EEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKW-CGSEGDY-NVMV 81 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~-~~~~~~~-~~lv 81 (227)
+|++.++||+|+||+||++.+..+|..+|.|-+.-.. ..+....|+.+|+.|+ ||||++++. .+.+++. .++|
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhhHHH
Confidence 5889999999999999999999999999999876432 2345778999999999 999999987 4445544 9999
Q ss_pred EeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccc--cc--eeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 82 MELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITA--PG--IIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~--~~--iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
||+| +|+|...++.. .+.+++.+++.++.|++ +|. +. |+|||||| |++++. +|.+++-|||++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~---~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA---NGVVKLGDFGLG 175 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC---CCceeeccchhH
Confidence 9999 99999998754 56899999999999999 888 55 99999999 999986 789999999998
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHH
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQL 217 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql 217 (227)
+.. .....+-..+.|||....+.-.-.......-++|.+|+-+.|+..- ..+|.....+.+..+|
T Consensus 176 r~l----~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL-~~PF~g~n~~~L~~KI 240 (375)
T KOG0591|consen 176 RFL----SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCAL-QSPFYGDNLLSLCKKI 240 (375)
T ss_pred hHh----cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhc-CCCcccccHHHHHHHH
Confidence 753 3345566677888866554433333334455689999988887764 5667666666666554
No 17
>KOG0616|consensus
Probab=99.97 E-value=4.6e-31 Score=200.60 Aligned_cols=183 Identities=18% Similarity=0.180 Sum_probs=147.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|+..+.||.|+||+|.+++++.+|..+|+|++++.. +.+...+|..+|+.+. ||.++++++.+.+.++.|+|
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEE
Confidence 57999999999999999999999999999999987653 2346788999999999 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ ||.|..++++ .++|++..++-++.|++ +|+.+|++||+|| |++++. +|..+++|||.++....+.
T Consensus 123 meyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~---~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ---NGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EeccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc---CCcEEEEeccceEEecCcE
Confidence 9999 9999999998 58899999999999988 9999999999999 999988 7999999999887543321
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
-+++|||..-.+.-....+..+..+-|.||.-.+|+..+-
T Consensus 199 -------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~ 238 (355)
T KOG0616|consen 199 -------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGY 238 (355)
T ss_pred -------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCC
Confidence 1345555332222222333333444566666666665553
No 18
>KOG0663|consensus
Probab=99.97 E-value=6.8e-31 Score=202.72 Aligned_cols=186 Identities=18% Similarity=0.177 Sum_probs=148.3
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----chhhHHHHHHHhcCCCCCCeeEEccc--cCcE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----QLHIESKIYKLMQGGVGIPQIKWCGS--EGDY 77 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~--~~~~ 77 (227)
..-+.|+.++.|+.|+||.||+|+|+.|++.||+|.++...... ...||+.+|.+++ |||||.+..... +-+.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR-HPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC-CCCeeeeEEEEeccccce
Confidence 34467999999999999999999999999999999987665443 3578999999998 999999976654 5567
Q ss_pred EEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 78 NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
.|+|||||..+|..++.....+|+..+++.++.|++ +|.+.|+|||||| |.++.. +|..++.|||+++...
T Consensus 152 iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~---~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 152 IYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH---KGILKIADFGLAREYG 228 (419)
T ss_pred eeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc---CCcEEecccchhhhhc
Confidence 999999999999999999888999999999999999 9999999999999 777765 8999999999998543
Q ss_pred Cchh-----hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 152 PQLH-----IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 152 ~~~~-----~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.... .-+.+|+.++ ...|.......++||..|+.+.|+....
T Consensus 229 sp~k~~T~lVVTLWYRaPE--------LLLG~~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPE--------LLLGAKTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred CCcccCcceEEEeeecCHH--------HhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence 2210 0011111111 1124445555788999999999998763
No 19
>KOG0658|consensus
Probab=99.97 E-value=5.2e-31 Score=205.53 Aligned_cols=185 Identities=24% Similarity=0.256 Sum_probs=148.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccC-----cEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEG-----DYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~-----~~~~lv~ 82 (227)
.|.-.+++|+|+||.||+|....+++.+|||.+-.+.+. -.+|.++|+++. |||||++..++... -+..+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--knrEl~im~~l~-HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--KNRELQIMRKLD-HPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc--CcHHHHHHHhcC-CcCeeeEEEEEEecCCCchhHHHHHH
Confidence 588899999999999999999999999999987544332 246999999998 99999997776532 1478999
Q ss_pred eCCCCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 83 ELLGPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 83 e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||+..+|.++++.. +.+++.-+++.++.|++ +|+.||+|||||| |++++.+ +|..++.|||.++...+.
T Consensus 102 eymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~--tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 102 EYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD--TGVLKICDFGSAKVLVKG 179 (364)
T ss_pred HhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC--CCeEEeccCCcceeeccC
Confidence 99999999999853 57899999999999998 9999999999999 9999887 899999999999854332
Q ss_pred hh----hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 154 LH----IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 154 ~~----~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.. .=+.+|+.+ -..+|.++....+++|..|+.+.||+.+. .-|.
T Consensus 180 epniSYicSRyYRaP--------ELifga~~Yt~~IDiWSaGCV~aELl~g~-plFp 227 (364)
T KOG0658|consen 180 EPNISYICSRYYRAP--------ELIFGATEYTTSIDIWSAGCVMAELLKGQ-PLFP 227 (364)
T ss_pred CCceeEEEeccccCH--------HHHcCccccCceeEEhhhhHHHHHHhcCC-cccC
Confidence 11 123344332 22346777778899999999999999873 3443
No 20
>KOG0032|consensus
Probab=99.97 E-value=6.5e-30 Score=208.50 Aligned_cols=190 Identities=24% Similarity=0.275 Sum_probs=154.9
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
+...|++.+.||+|.||.||+|.++.+|+.+|+|.+.+... ...+.+|+.+|+++.+||||+.+++.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 55689999999999999999999999999999999976532 2468899999999999999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC-CCeeeEEeeeccccCC
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS-TGEEVAIKLECIKTRH 151 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~-~~~~~~~~~~~~~~~~ 151 (227)
+|||+| ||.|.|.+... .+++..+..++.|++ +|+.||+|||+|| |+++..... .+..+++|||++....
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 999999 99999999874 499999999999999 9999999999999 888887644 4689999999998654
Q ss_pred CchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 152 PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
+. .......|++++..+.-.+.........||.+|..++.|..+.
T Consensus 191 ~~-----~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~ 235 (382)
T KOG0032|consen 191 PG-----ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGV 235 (382)
T ss_pred CC-----ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCC
Confidence 41 1123345655543333333334444567888888888876664
No 21
>KOG0599|consensus
Probab=99.97 E-value=8.5e-31 Score=197.62 Aligned_cols=198 Identities=17% Similarity=0.174 Sum_probs=166.6
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----------CchhhHHHHHHHhcCCCCCCeeEEccccCc
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----------PQLHIESKIYKLMQGGVGIPQIKWCGSEGD 76 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 76 (227)
+.|...+.||+|..+.|.+|.++.+|.++|+|++...... +...+|++||+.+.+||+|+++.++++++.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 4688889999999999999999999999999998654221 134669999999999999999999999999
Q ss_pred EEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..|+|+|.+ .|.|.|++.+ .-.+|+.+.+.|++|++ +|.++|||||||| ||++++ +-+.++.|||.+..
T Consensus 97 F~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd---n~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD---NMNIKISDFGFACQ 172 (411)
T ss_pred hhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc---ccceEEeccceeec
Confidence 999999999 9999999998 57899999999999999 9999999999999 888887 56799999998876
Q ss_pred CCCchhhHHHHHHhhccCCCCC-----eeeeccccCCee-EEEeeccCCCHHHHHhHcCCCCCHHHHHHH
Q psy3118 150 RHPQLHIESKIYKLMQGGVGIP-----QIKWCGSEGDYN-VMVMELLGPSLEDLFNFCSRRFSLKTVLLL 213 (227)
Q Consensus 150 ~~~~~~~e~~~y~~l~g~~g~p-----~~~~~g~~~~~~-~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l 213 (227)
..+.. -.+-++|+||+- +..|+.....|. -.++|.+|..+..|..+|++.+..++++++
T Consensus 173 l~~Ge-----kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML 237 (411)
T KOG0599|consen 173 LEPGE-----KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML 237 (411)
T ss_pred cCCch-----hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH
Confidence 55432 345678888763 334444444443 566899999999999999998998888765
No 22
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=7.4e-30 Score=209.54 Aligned_cols=138 Identities=16% Similarity=0.229 Sum_probs=123.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+|+.+++.++ |++|+++++.+.+....++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence 47999999999999999999999999999999986532 1235778999999997 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+ |++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.++.
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~---~~~vkL~DFGla~~ 150 (363)
T cd05628 80 MEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS---KGHVKLSDFGLCTG 150 (363)
T ss_pred EcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC---CCCEEEeeccCccc
Confidence 9999 9999999987 57899999999999998 9999999999999 988876 67899999998763
No 23
>KOG0661|consensus
Probab=99.96 E-value=1.9e-31 Score=213.91 Aligned_cols=186 Identities=21% Similarity=0.268 Sum_probs=149.3
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-C--chhhHHHHHHHhcCCCCCCeeEEccccCc-EE
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-P--QLHIESKIYKLMQGGVGIPQIKWCGSEGD-YN 78 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~--~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-~~ 78 (227)
..+.+||++++.||.|+||.||+|..+.++..||||.+++.-.. + .-.||+..|++|+.||||+++.+.+.+++ .+
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 34678999999999999999999999999999999988654221 1 23679999999998999999999999888 99
Q ss_pred EEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 79 VMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
|+||||+..+|.++++..++.|++..++.|+.||+ +|++|+.|||+|| |+++.. ...+++.|||+++....
T Consensus 86 ~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~---~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 86 YFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG---NDVIKIADFGLAREVRS 162 (538)
T ss_pred eeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc---cceeEeccccccccccc
Confidence 99999999999999999888999999999999999 9999999999999 666653 45688999999985432
Q ss_pred ----chhhHHHHHHhhccCCCCCeeeeccccCCe-eEEEeeccCCCHHHHHhH
Q psy3118 153 ----QLHIESKIYKLMQGGVGIPQIKWCGSEGDY-NVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 153 ----~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~-~~~vm~~lg~~l~~l~~~ 200 (227)
.....+.+|++.+ +... ...| .-++||.+|+.+.|++.-
T Consensus 163 kpPYTeYVSTRWYRAPE-------vLLr--s~~Ys~pvD~wA~GcI~aEl~sL 206 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPE-------VLLR--SGYYSSPVDMWAVGCIMAELYSL 206 (538)
T ss_pred CCCcchhhhcccccchH-------Hhhh--ccccCCchHHHHHHHHHHHHHHh
Confidence 2333445555432 2211 1122 246788889988888875
No 24
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.96 E-value=2e-29 Score=207.92 Aligned_cols=137 Identities=17% Similarity=0.256 Sum_probs=122.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||||.+.... ....+.+|+++++.++ ||||+++++++.+++..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEE
Confidence 47999999999999999999999999999999986532 1235778999999997 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ |++|.+++.. ...+++..++.++.|++ +|+.||+|||||| |++++. .+..++.|||.++
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~---~~~~kl~DfGla~ 149 (377)
T cd05629 80 MEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR---GGHIKLSDFGLST 149 (377)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC---CCCEEEeeccccc
Confidence 9999 9999999987 46799999999999998 9999999999999 988875 6789999999875
No 25
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.96 E-value=1.4e-29 Score=207.84 Aligned_cols=137 Identities=18% Similarity=0.256 Sum_probs=123.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++ |+||+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEE
Confidence 47999999999999999999999999999999987542 1234678999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ |++|.+++.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..+++|||.+.
T Consensus 80 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~---~~~~kl~Dfg~~~ 149 (364)
T cd05599 80 MEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA---KGHIKLSDFGLCT 149 (364)
T ss_pred ECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC---CCCEEEeecccce
Confidence 9999 9999999987 46799999999999998 9999999999999 999876 6789999999775
No 26
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.96 E-value=2.3e-29 Score=207.91 Aligned_cols=137 Identities=16% Similarity=0.238 Sum_probs=122.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++++.||+|+||.||+|.+..+++.+|+|.+.... ....+.+|+.+++.++ |+||+++++.+.+++..++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFV 79 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEE
Confidence 46999999999999999999999999999999986542 1235778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ +++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+.
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~---~g~~kL~DFGla~ 149 (382)
T cd05625 80 MDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR---DGHIKLTDFGLCT 149 (382)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEEeECCCCc
Confidence 9999 9999999987 46789999999999988 9999999999999 998876 6789999999764
No 27
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=3.8e-29 Score=203.05 Aligned_cols=187 Identities=17% Similarity=0.203 Sum_probs=145.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+|+++++.++ ||||+++++++.+++..++|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999987542 2235778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ |++|.+++.. ...+++..+..++.|++ +|+.||+|||||| |++++. .+..+++|||.+......
T Consensus 80 ~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~kL~Dfg~a~~~~~~- 154 (333)
T cd05600 80 MEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA---SGHIKLTDFGLSKGIVTY- 154 (333)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC---CCCEEEEeCcCCcccccc-
Confidence 9999 9999999987 46799999999999998 9999999999999 988876 678999999987643220
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.....|++++..+............++|.+|..+++++.+. .+|+
T Consensus 155 ------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~-~pf~ 199 (333)
T cd05600 155 ------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGF-PPFS 199 (333)
T ss_pred ------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCC-CCCC
Confidence 01112332221111111112223467788899998888753 4453
No 28
>KOG0585|consensus
Probab=99.96 E-value=1.8e-29 Score=202.58 Aligned_cols=206 Identities=17% Similarity=0.125 Sum_probs=148.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----------------CCchhhHHHHHHHhcCCCCCCeeE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----------------HPQLHIESKIYKLMQGGVGIPQIK 69 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----------------~~~~~~E~~~l~~l~~~~~i~~~~ 69 (227)
-+.|++.+.||+|.||.|-+|++..+++.||||++.+... .+...+|+.||++|. |+|||+++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~Li 174 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKLI 174 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEEE
Confidence 4679999999999999999999999999999999866421 125788999999998 89999999
Q ss_pred EccccC--cEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeee
Q psy3118 70 WCGSEG--DYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEV 140 (227)
Q Consensus 70 ~~~~~~--~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~ 140 (227)
++-.++ +..|||+||| .|.+.+.-.. ...+++.+++.+++.++ ||.+||||||||| |.+++. +|.++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~---~g~VK 250 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS---DGTVK 250 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC---CCcEE
Confidence 998875 4699999999 8887654333 23399999999999988 9999999999999 888877 69999
Q ss_pred EEeeeccccCCCch--hhHHHHHHhhccCCCCC--eeeeccccC--CeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHH
Q psy3118 141 AIKLECIKTRHPQL--HIESKIYKLMQGGVGIP--QIKWCGSEG--DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLA 214 (227)
Q Consensus 141 ~~~~~~~~~~~~~~--~~e~~~y~~l~g~~g~p--~~~~~g~~~--~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~ 214 (227)
+.|||-+....... ..+..+ ....|||.+. ..-+.|... ....+++|.+|.+|+=|..+ .-+|--...+.+.
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L-~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG-~~PF~~~~~~~l~ 328 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQL-SRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFG-QLPFFDDFELELF 328 (576)
T ss_pred eeccceeeecccCCccccHHHH-hhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhc-cCCcccchHHHHH
Confidence 99999765332211 112222 2234444332 222222211 12266789999998876544 2344444555555
Q ss_pred HHHH
Q psy3118 215 DQLF 218 (227)
Q Consensus 215 ~ql~ 218 (227)
++|+
T Consensus 329 ~KIv 332 (576)
T KOG0585|consen 329 DKIV 332 (576)
T ss_pred HHHh
Confidence 5554
No 29
>KOG4250|consensus
Probab=99.96 E-value=2e-30 Score=216.66 Aligned_cols=193 Identities=19% Similarity=0.227 Sum_probs=149.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec---CCCCchhhHHHHHHHhcCCCCCCeeEEccccCc------
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK---TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD------ 76 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 76 (227)
+.-|...+.||+|+||.||+++++.+|+.||||..+.. ...+++.+|+++|++|+ |+|||++.+.-++..
T Consensus 12 ~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred CcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccc
Confidence 45688999999999999999999999999999998763 34467899999999999 999999988766543
Q ss_pred EEEEEEeCC-CCCHHHHHhhC--CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeecc-CCCeeeEEeeec
Q psy3118 77 YNVMVMELL-GPSLEDLFNFC--SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNI-STGEEVAIKLEC 146 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~-~~~~~~~~~~~~ 146 (227)
...+||||| ||||..++++. ...+++.+.+.+...+. ||++||||||||| ||++-.+. ...-.+++|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 589999999 99999999975 34799999999999887 9999999999999 99987764 233467999999
Q ss_pred cccCCCchhhHHHHHHhhccCCCCCeeeeccccCCee-EEEeeccCCCHHHHHhHcCCCC
Q psy3118 147 IKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN-VMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 147 ~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~-~~vm~~lg~~l~~l~~~~~~~f 205 (227)
++...... ....+.||+.+-.+.-+-.+..|. -.+.|.+|..+++...+ ..||
T Consensus 171 Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG-~lPF 224 (732)
T KOG4250|consen 171 ARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATG-ELPF 224 (732)
T ss_pred cccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhcc-CCCC
Confidence 98654322 334455665432222222122233 45579999998887666 3445
No 30
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.96 E-value=4e-29 Score=206.13 Aligned_cols=137 Identities=16% Similarity=0.228 Sum_probs=122.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++ |+||+++++.+.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999986432 2345778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ +++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+.
T Consensus 80 ~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~---~~~ikL~DFG~a~ 149 (376)
T cd05598 80 MDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR---DGHIKLTDFGLCT 149 (376)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC---CCCEEEEeCCCCc
Confidence 9999 9999999987 46789999999999988 9999999999999 999876 6789999999763
No 31
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.96 E-value=7.8e-29 Score=204.72 Aligned_cols=137 Identities=16% Similarity=0.233 Sum_probs=122.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+.|++++.||+|+||+||+|.+..+++.||+|++.... ....+.+|+.+++.++ |+||+++++++.+++..++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEE
Confidence 36899999999999999999999999999999986542 1235778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ |++|.+++.. ...+++..+..++.|++ +|+.||+|||||| |++++. .+..++.|||.+.
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~---~~~~kL~DFGl~~ 149 (381)
T cd05626 80 MDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL---DGHIKLTDFGLCT 149 (381)
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC---CCCEEEeeCcCCc
Confidence 9999 9999999987 46799999999999988 9999999999999 998875 6789999999764
No 32
>KOG0594|consensus
Probab=99.96 E-value=1.7e-29 Score=196.82 Aligned_cols=181 Identities=18% Similarity=0.270 Sum_probs=141.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCC-CCeeEEccccCc------
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVG-IPQIKWCGSEGD------ 76 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~-i~~~~~~~~~~~------ 76 (227)
.|+.++.||.|+||.||+|+++.+|+.||+|.++..... ....+|+.++++|+ |+| |+.++++..+.+
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccccc
Confidence 367778899999999999999999999999998766442 35689999999999 777 999999998877
Q ss_pred EEEEEEeCCCCCHHHHHhhCC---CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 77 YNVMVMELLGPSLEDLFNFCS---RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 77 ~~~lv~e~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
.+++|+||+..+|.+++.... ..++...++.++.|++ ||++||+|||||| |+++++ .|..++.|||.+
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~---~G~lKlaDFGlA 167 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS---SGVLKLADFGLA 167 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC---CCcEeeeccchH
Confidence 899999999999999999864 3688889999999999 9999999999999 877776 899999999998
Q ss_pred ccCC-CchhhH----HHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 148 KTRH-PQLHIE----SKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 148 ~~~~-~~~~~e----~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
+... |..... +.+|+. |.+ -.|.......++||.+|+...|++.+
T Consensus 168 ra~~ip~~~yt~evvTlWYRa-------PEv-LlGs~~Ys~~vDiWs~GcIfaEm~~~ 217 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRA-------PEV-LLGSTSYSTSVDIWSLGCIFAEMFTR 217 (323)
T ss_pred HHhcCCcccccccEEEeeccC-------HHH-hcCCCcCCCCcchHhHHHHHHHHHhC
Confidence 7443 221110 111111 111 12333434456777888888777775
No 33
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.96 E-value=3.3e-29 Score=199.76 Aligned_cols=182 Identities=19% Similarity=0.245 Sum_probs=141.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|++.... ....+.+|+++++.++ ||||+++++.+.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEE
Confidence 47999999999999999999999999999999986532 2235778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ +++|.+++.. .+.+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~---~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 80 MEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK---EGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC---CCCEEEEecCcchhccCCc
Confidence 9999 9999999987 56799999999999988 9999999999999 888865 6789999999876432111
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
. ...|++.+..+............++|.+|..+++++.+
T Consensus 156 ~-------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g 194 (291)
T cd05612 156 W-------TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194 (291)
T ss_pred c-------cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 0 01122221111111112223346778888888888765
No 34
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96 E-value=1.3e-28 Score=199.71 Aligned_cols=184 Identities=17% Similarity=0.194 Sum_probs=143.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
-++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.++ ||||+++++++.+++..++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEE
Confidence 367999999999999999999999999999999986542 2235788999999997 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+|||+ |++|.+.+.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+......
T Consensus 96 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN---KGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC---CCCEEEeeccCceEcCCC
Confidence 99999 9999999987 56789999999999988 9999999999999 999876 678999999987643221
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.. ...|++.+..+............++|.+|..+++++.+.
T Consensus 172 ~~-------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 212 (329)
T PTZ00263 172 TF-------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGY 212 (329)
T ss_pred cc-------eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCC
Confidence 10 011222111111111111223456788888888887653
No 35
>KOG0198|consensus
Probab=99.96 E-value=3.2e-29 Score=197.71 Aligned_cols=142 Identities=25% Similarity=0.339 Sum_probs=124.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCc--EEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGD--YNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--~~~lv~ 82 (227)
.+|..++.||+|+||.||++.+..+|...|+|.+..... .+.+.+|+.+|.+|+ |||||++++...... .+++.|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEeee
Confidence 468999999999999999999999999999999865421 345889999999999 999999999755444 689999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
||+ +|||.+++...++.+++..++.+++|++ +|++||||||||| |++++.. .+..++.|||.++...
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLE 169 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC--CCeEEeccCccccccc
Confidence 999 9999999998644899999999999999 9999999999999 8888874 5789999999887544
No 36
>KOG1165|consensus
Probab=99.96 E-value=4e-29 Score=193.08 Aligned_cols=213 Identities=38% Similarity=0.646 Sum_probs=172.4
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.+++-.|.++++||.|+||..+.|.+..++++||||..+..++.+++..|-...+.|.+.++|+..|.++.++.+..||+
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC--CCeeeEEeeecccc-CCCc
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS--TGEEVAIKLECIKT-RHPQ 153 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~--~~~~~~~~~~~~~~-~~~~ 153 (227)
|++|.||+|++.-++++||..++..+|.|++ +|++..|.||||| |++++.... ...+.++|||.++. +.|.
T Consensus 104 dLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 104 DLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred hhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 9999999999999999999999999999998 9999999999999 999987433 24577999997762 2222
Q ss_pred ---------------------------------hhhHHH---HHHhhccCCCCCeeeeccccCCee-----EEEeeccCC
Q psy3118 154 ---------------------------------LHIESK---IYKLMQGGVGIPQIKWCGSEGDYN-----VMVMELLGP 192 (227)
Q Consensus 154 ---------------------------------~~~e~~---~y~~l~g~~g~p~~~~~g~~~~~~-----~~vm~~lg~ 192 (227)
+++|+. ++--|+| .+||.|-.-..+ -+-...-..
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRG-----sLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG-----SLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccC-----CCccccccCcchHHHHHHhccccccC
Confidence 233322 1112233 678988543332 223344456
Q ss_pred CHHHHHhHcCCCCCHHHHHHHHHHHHHHhh
Q psy3118 193 SLEDLFNFCSRRFSLKTVLLLADQLFLYNT 222 (227)
Q Consensus 193 ~l~~l~~~~~~~f~~~~~l~l~~ql~~~~~ 222 (227)
++++|+.+-+..| .+.+.++..|-|+++
T Consensus 259 ~i~~Lc~g~P~ef--a~Yl~yvR~L~F~E~ 286 (449)
T KOG1165|consen 259 PIEVLCEGFPEEF--ATYLRYVRRLDFFET 286 (449)
T ss_pred CHHHHHhcCHHHH--HHHHHHHHhcCcccC
Confidence 7888888755544 488888888877653
No 37
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.96 E-value=9.1e-29 Score=202.00 Aligned_cols=138 Identities=20% Similarity=0.305 Sum_probs=123.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+..|+.++..++ |+||+++++.+.+++..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEE
Confidence 47999999999999999999999999999999987542 1235778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+ +++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+..
T Consensus 80 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~---~~~~kL~Dfg~~~~ 150 (350)
T cd05573 80 MEYMPGGDLMNLLIR-KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA---DGHIKLADFGLCKK 150 (350)
T ss_pred EcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEeecCCCCcc
Confidence 9999 9999999987 47899999999999998 9999999999999 999876 67899999998764
No 38
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.96 E-value=2.2e-28 Score=201.15 Aligned_cols=191 Identities=18% Similarity=0.159 Sum_probs=145.5
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|++.+.. ....+.+|+.+++.++ ||||+++++++.+++..++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEE
Confidence 468999999999999999999999999999999986532 1234678999999998 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||||+ |++|.++++. ..+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+......
T Consensus 121 v~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~---~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK---HGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC---CCCEEEEecccceecccC
Confidence 99999 9999999975 4689999999999998 9999999999999 999876 678999999987643221
Q ss_pred hhhHHHHHHhhccCCCCCeeeec-ccc--C-CeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWC-GSE--G-DYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~-g~~--~-~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.... .....|++++..+... +.. . .....++|.+|..+++++.+. .+|.
T Consensus 196 ~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~-~Pf~ 248 (370)
T cd05621 196 GMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD-TPFY 248 (370)
T ss_pred Ccee---cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCC-CCCC
Confidence 1100 0112233322111111 111 1 123467899999999998763 4453
No 39
>KOG0197|consensus
Probab=99.96 E-value=3.6e-29 Score=203.54 Aligned_cols=195 Identities=19% Similarity=0.219 Sum_probs=154.7
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+++++.||+|-||.||.|.+. ....||+|.++... ..+.+.+|+++|++|+ |++||++++++..++.++|||||+ .
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEEEEEeccc
Confidence 456788999999999999983 23389999987654 3467889999999999 999999999999999999999999 9
Q ss_pred CCHHHHHhh-CCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 87 PSLEDLFNF-CSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 87 ~~L~~~~~~-~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
|||.++++. .+..++..+.+.++.||+ |+++++|||||.. |++++. +..+++.|||+++.. +..
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~---~~~vKIsDFGLAr~~------~d~ 356 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE---DLVVKISDFGLARLI------GDD 356 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc---CceEEEccccccccc------CCC
Confidence 999999997 467899999999999999 9999999999999 999988 568999999999822 122
Q ss_pred HHHhhccCCCCCeeeeccccCC-----eeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHH
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGD-----YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQ 216 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~-----~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~q 216 (227)
.|..-+|+. -++-|+.++-- ...-+.|.+|..|+|+|+.-.-++...+...++.+
T Consensus 357 ~Y~~~~~~k--fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~ 416 (468)
T KOG0197|consen 357 EYTASEGGK--FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLEL 416 (468)
T ss_pred ceeecCCCC--CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHH
Confidence 344434433 46778777622 22456899999999999885445444444444433
No 40
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=1.9e-28 Score=201.00 Aligned_cols=137 Identities=18% Similarity=0.260 Sum_probs=122.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+|+.++..++ |++|+++++.+.+++..++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 46999999999999999999999999999999986532 1235778999999997 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ |++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+.
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~---~~~vkL~DfG~~~ 149 (360)
T cd05627 80 MEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA---KGHVKLSDFGLCT 149 (360)
T ss_pred EeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC---CCCEEEeeccCCc
Confidence 9999 9999999987 46799999999999998 9999999999999 988866 6789999999765
No 41
>KOG0694|consensus
Probab=99.96 E-value=4.8e-29 Score=207.83 Aligned_cols=186 Identities=20% Similarity=0.177 Sum_probs=143.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
-++|.++++||+|+||+|++|..+.+++.+|||+++++. ..+..+.|.+|+..+.+||.+++++.++++.++.|+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 357999999999999999999999999999999998763 234688899999999999999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||||+ ||++....+ .+.|++..++.++..++ +|++|||+||||. |++|+. .|.+++.|||+++...-.
T Consensus 447 vmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~---eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT---EGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc---cCcEEecccccccccCCC
Confidence 99999 999444333 47899999999999987 9999999999999 999988 799999999998854322
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.+.- .+..|||.+..+.-........+.+-|.||.-++++.-+
T Consensus 522 g~~T----sTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~G 564 (694)
T KOG0694|consen 522 GDRT----STFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVG 564 (694)
T ss_pred CCcc----ccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcC
Confidence 2211 223455433222222222333344445666665555543
No 42
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96 E-value=3.3e-28 Score=198.02 Aligned_cols=184 Identities=17% Similarity=0.180 Sum_probs=141.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCC-cEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTG-EEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~-~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
-++|++.+.||+|+||.||+|.+..++ ..||+|.+.... ....+.+|+.+++.++ ||||+++++++.+++..+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLY 107 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEE
Confidence 357999999999999999999876555 689999886532 2235778999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
+||||+ +++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. ++..+++|||.+.....
T Consensus 108 lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~---~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK---DGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC---CCCEEEecCCCCeecCC
Confidence 999999 9999999987 46799999999999998 9999999999999 998865 67899999998764322
Q ss_pred chhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
... ...|++.+..+............++|.+|..+++++.+.
T Consensus 184 ~~~-------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~ 225 (340)
T PTZ00426 184 RTY-------TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGC 225 (340)
T ss_pred Ccc-------eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCC
Confidence 110 112222111111111111223456788899999988763
No 43
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96 E-value=3.9e-28 Score=196.97 Aligned_cols=188 Identities=13% Similarity=0.111 Sum_probs=141.9
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||++.+..+++.||+|++.... ....+..|..++..+. |++|+++++++.+++..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 57999999999999999999999999999999986532 1224677889998887 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ |++|.+++......+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~---~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM---NGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC---CCCEEEEeccceeeccCCC
Confidence 9999 9999999987556799999999999988 8999999999999 888875 6789999999876432211
Q ss_pred hhHHHHHHhhccCCCCCeeee-ccc----cCCeeEEEeeccCCCHHHHHhHc
Q psy3118 155 HIESKIYKLMQGGVGIPQIKW-CGS----EGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~-~g~----~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.... ....|+++...... .+. .......++|.+|..+++++.+.
T Consensus 157 ~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~ 205 (331)
T cd05624 157 TVQS---SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 205 (331)
T ss_pred ceee---ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCC
Confidence 1000 01123322211111 110 11112356788888888888753
No 44
>KOG1989|consensus
Probab=99.96 E-value=3.1e-28 Score=207.88 Aligned_cols=142 Identities=20% Similarity=0.286 Sum_probs=120.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC--CchhhHHHHHHHhcCCCCCCeeEE-cccc------Cc
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH--PQLHIESKIYKLMQGGVGIPQIKW-CGSE------GD 76 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~E~~~l~~l~~~~~i~~~~~-~~~~------~~ 76 (227)
+.+.++.+.|.+|||+.||+|.+...+..||+|.+-..... ..+.+|+++|++|++|+|||.+++ .... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 34789999999999999999999888899999987655322 357889999999999999999998 3322 13
Q ss_pred EEEEEEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccc--eeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 77 YNVMVMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPG--IIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~--iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
..+|.|||| ||+|-|+++.. ...|++.+++.|+.+++ +|... |||||||- |+|+.. .|..+++|||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~---~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA---DGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC---CCCEEeCcccc
Confidence 589999999 89999999965 55699999999999999 89765 99999999 888876 68899999998
Q ss_pred cccC
Q psy3118 147 IKTR 150 (227)
Q Consensus 147 ~~~~ 150 (227)
+...
T Consensus 193 att~ 196 (738)
T KOG1989|consen 193 ATTK 196 (738)
T ss_pred cccc
Confidence 8643
No 45
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95 E-value=4.5e-28 Score=199.41 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=149.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|++.... ....+.+|+.+++.++ ||||+++++.+.+++..++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEE
Confidence 468999999999999999999999999999999986532 1224667999999997 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||||+ |++|.++++. ..+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+......
T Consensus 121 v~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~---~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 121 VMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC---CCCEEEEeCCceeEcCcC
Confidence 99999 9999999876 4689999999999988 9999999999999 988876 678999999987643221
Q ss_pred hhhHHHHHHhhccCCCCCeeeec-ccc--C-CeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWC-GSE--G-DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQL 217 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~-g~~--~-~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql 217 (227)
.... .....|+++...+... +.. . .....++|.+|..+++++.+. .+|...+......++
T Consensus 196 ~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~-~Pf~~~~~~~~~~~i 259 (371)
T cd05622 196 GMVR---CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD-TPFYADSLVGTYSKI 259 (371)
T ss_pred Cccc---ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCC-CCCCCCCHHHHHHHH
Confidence 1000 0112233322111111 111 1 123467899999999998863 455433333333333
No 46
>KOG0580|consensus
Probab=99.95 E-value=1e-29 Score=188.07 Aligned_cols=187 Identities=17% Similarity=0.181 Sum_probs=144.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
-++|++++.||+|.||.||+|+.+.++-.||+|++.+.+ -..++.+|++|-..|+ ||||.++|+++.+....|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEE
Confidence 467999999999999999999999999999999986653 2347899999999999 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC--
Q psy3118 81 VMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR-- 150 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~-- 150 (227)
++||. +|+|...+... ..++++..+..++.|++ +|.++|||||||| |.+++. .+..++.|||-+-..
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCCeeccCCCceeecCC
Confidence 99999 99999988843 46799999999999998 9999999999999 888887 788999999966422
Q ss_pred -CCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 151 -HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 151 -~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.+.....+..|-.++. -...+.....+.|.+|.--.++.-++ ++|.
T Consensus 177 ~kR~tlcgt~dyl~pEm---------v~~~~hd~~Vd~w~lgvl~yeflvg~-ppFe 223 (281)
T KOG0580|consen 177 NKRKTLCGTLDYLPPEM---------VEGRGHDKFVDLWSLGVLCYEFLVGL-PPFE 223 (281)
T ss_pred CCceeeecccccCCHhh---------cCCCCccchhhHHHHHHHHHHHHhcC-Cchh
Confidence 1222222222222211 11123333455677776666666653 4443
No 47
>KOG0588|consensus
Probab=99.95 E-value=1.6e-28 Score=203.94 Aligned_cols=189 Identities=18% Similarity=0.175 Sum_probs=150.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+-|++++.||+|+-|.|-+|.+..||+.+|||++.+... ...+.+|+-+|+.|. |||+.++|+++++..++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEEE
Confidence 569999999999999999999999999999999977632 246888999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
.||+ ||.|+|++-. .+++++.++..++.||+ +|..+|+|||+|| |++++.. +..++.|||.+....+
T Consensus 91 lEyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~---~nIKIADFGMAsLe~~-- 164 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVK---NNIKIADFGMASLEVP-- 164 (786)
T ss_pred EEecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcc---cCEeeeccceeecccC--
Confidence 9999 9999999988 68999999999999998 9999999999999 8888874 4599999998874433
Q ss_pred hhHHHHHHhhccCCCCCeeee-ccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKW-CGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~-~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
...++.-+|.|++....- .|..=+...-+.|.+|..|.-|+.+ .-+|+
T Consensus 165 ---gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG-~LPFd 213 (786)
T KOG0588|consen 165 ---GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTG-KLPFD 213 (786)
T ss_pred ---CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhC-CCCCC
Confidence 233344456665432211 1111111134567778777777665 45554
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.95 E-value=5.8e-28 Score=195.36 Aligned_cols=180 Identities=16% Similarity=0.125 Sum_probs=137.9
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+|+.||+|++.... ....+.+|+.++++++ ||||+++++.+..++..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999987542 1234677999999998 999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..+++|||.++........
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~---~~~~kl~DfG~a~~~~~~~~~---- 151 (323)
T cd05571 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK---DGHIKITDFGLCKEGISDGAT---- 151 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC---CCCEEEeeCCCCcccccCCCc----
Confidence 999999887 56799999999999998 9999999999999 998876 678999999987632111000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.....|++.+..+............++|.+|..+++++.+.
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 192 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCC
Confidence 01122333222222211222233567888899988888753
No 49
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.95 E-value=7.3e-28 Score=198.16 Aligned_cols=192 Identities=17% Similarity=0.141 Sum_probs=145.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.++ ||||+++++++.+++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEEE
Confidence 357999999999999999999999999999999986532 1224678999999998 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||||+ |++|.+++.. ..+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+......
T Consensus 121 v~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~---~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC---CCCEEEEeccceeeccCC
Confidence 99999 9999999875 5689999999999988 9999999999999 999876 688999999987643221
Q ss_pred hhhHHHHHHhhccCCCCCeeee-cccc---CCeeEEEeeccCCCHHHHHhHcCCCCCH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKW-CGSE---GDYNVMVMELLGPSLEDLFNFCSRRFSL 207 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~-~g~~---~~~~~~vm~~lg~~l~~l~~~~~~~f~~ 207 (227)
... ......|++....+.. .+.. ......++|.+|..+++++.+. .+|..
T Consensus 196 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~-~Pf~~ 249 (370)
T cd05596 196 GMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD-TPFYA 249 (370)
T ss_pred Ccc---cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCC-CCcCC
Confidence 100 0011123332211111 1110 1223567899999999998763 44543
No 50
>KOG0033|consensus
Probab=99.95 E-value=5.7e-31 Score=195.72 Aligned_cols=209 Identities=16% Similarity=0.144 Sum_probs=157.2
Q ss_pred CceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 2 ELRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 2 ~~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
+..+.+.|++.+.||+|.|+.|+++.+..+|+.+|+|++..+ ...+.+.+|+.|.+.|+ ||||+++.+...+.+.
T Consensus 6 ~~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~ 84 (355)
T KOG0033|consen 6 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESF 84 (355)
T ss_pred ccccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC-CCcEeehhhhhcccce
Confidence 356788999999999999999999999999999999988654 23457899999999999 9999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.|+|+|++ |++|..-+-. +..+|+..+...++||+ +|.+||||||+|| |.++.+.....-+++.+||.+...
T Consensus 85 ~ylvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred eEEEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 99999999 9888654433 25689999999999999 9999999999999 999988766677889999988755
Q ss_pred CCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHH
Q psy3118 151 HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLF 218 (227)
Q Consensus 151 ~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~ 218 (227)
.. .+.+ -...|+|++..+.-.-......-..||.+|..|.-|..+|+ +|.-.+--++..||+
T Consensus 164 ~~---g~~~--~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~-PF~~~~~~rlye~I~ 225 (355)
T KOG0033|consen 164 ND---GEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP-PFWDEDQHRLYEQIK 225 (355)
T ss_pred CC---cccc--ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCC-CCCCccHHHHHHHHh
Confidence 41 1111 12234454433222222222334567878887777777763 343334444444443
No 51
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.95 E-value=5.7e-28 Score=192.37 Aligned_cols=199 Identities=18% Similarity=0.169 Sum_probs=147.9
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|+||.||+|.+..++..||+|.++... ....+.+|+.+++.++ ||||+++++++.+.+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEEEe
Confidence 57999999999999999999999999999999986432 2235778999999998 9999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 84 LLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
|+.++|.+++......+++..+..++.|++ +|++||+|||||| |++++. ++..+++|||.+.........
T Consensus 84 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~---~~~~kl~DfG~~~~~~~~~~~- 159 (288)
T cd07871 84 YLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE---KGELKLADFGLARAKSVPTKT- 159 (288)
T ss_pred CCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEECcCcceeeccCCCcc-
Confidence 997799999887556689999999999998 9999999999999 988876 678999999987632211100
Q ss_pred HHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHH
Q psy3118 158 SKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLAD 215 (227)
Q Consensus 158 ~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ 215 (227)
.....+++.+ |... .+........++|.+|..+++++.+ ..+|...+......
T Consensus 160 ---~~~~~~~~~y~aPE~~-~~~~~~~~~~DiwslG~~l~~l~~g-~~pf~~~~~~~~~~ 214 (288)
T cd07871 160 ---YSNEVVTLWYRPPDVL-LGSTEYSTPIDMWGVGCILYEMATG-RPMFPGSTVKEELH 214 (288)
T ss_pred ---ccCceecccccChHHh-cCCcccCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHH
Confidence 0000111111 1111 1212222235678899999999876 45564444433333
No 52
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95 E-value=1e-27 Score=194.51 Aligned_cols=191 Identities=15% Similarity=0.180 Sum_probs=144.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||++.+..+++.||+|++.+.. ....+.+|+.+++.++ |++|+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEE
Confidence 47999999999999999999999999999999986532 2234778999999987 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ |++|.+++......+++.++..++.|++ +|++||+|||||| |+++.. .+..+++|||.+.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK---NGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC---CCCEEEEECCceeecCCCC
Confidence 9999 9999999986556799999999999998 9999999999999 998865 6789999999875332211
Q ss_pred hhHHHHHHhhccCCCC--Ceeeec---cccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 155 HIESKIYKLMQGGVGI--PQIKWC---GSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~--p~~~~~---g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
..... ...|+++. |..... +........++|.+|..+++++.+ ..+|
T Consensus 157 ~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g-~~Pf 208 (331)
T cd05597 157 TVQSN---VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYG-ETPF 208 (331)
T ss_pred Ccccc---ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhC-CCCC
Confidence 10000 01122221 111110 011112246788999999998875 3444
No 53
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95 E-value=8.3e-28 Score=194.51 Aligned_cols=185 Identities=17% Similarity=0.150 Sum_probs=140.4
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+..|.+++..+.+|++|+.+++++.+.+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5899999999999999999999999999999987542 12356779999999987778999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
||+ +++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. ++..+++|||.+........
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~---~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA---EGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC---CCCEEEeecCcceecCCCCC
Confidence 999 9999999887 46799999999999998 9999999999999 988876 57899999997753211000
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
. .....|++++..+............++|.+|..+++++.+
T Consensus 157 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 197 (324)
T cd05587 157 T----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (324)
T ss_pred c----eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhC
Confidence 0 0111233322111111111112345678889888888875
No 54
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.95 E-value=4.3e-28 Score=196.64 Aligned_cols=139 Identities=19% Similarity=0.297 Sum_probs=123.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|.+.+.||+|+||.||+|.+..+++.||+|.++.... ...+.+|+.+++.++ |++|+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEE
Confidence 479999999999999999999999999999999875422 234677999999887 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+ +++|.++++.....+++..+..++.|++ +|+.||+|||||| |++++. ++..+++|||.+..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~---~~~~kL~Dfg~a~~ 151 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR---TGHIKLADFGSAAR 151 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC---CCCEEeccCCCCeE
Confidence 9999 9999999987556899999999999998 9999999999999 888876 68899999998764
No 55
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95 E-value=9.3e-28 Score=194.16 Aligned_cols=190 Identities=18% Similarity=0.160 Sum_probs=143.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+|.+.+.||+|+||.||+|.+..+++.||+|++..... ......|..++..+.+|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 58899999999999999999999999999999875421 1235668888888887999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
||+ +++|.+.+.. ...+++.++..++.|++ +|+.||+|||||| |++++. ++..++.|||.+........
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~---~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC---CCcEEEccCCCceecCCCCC
Confidence 999 9999999877 46799999999999998 9999999999999 988876 67899999998763221100
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
. .....|++.+..+............++|.+|..+++++.+ ..+|.
T Consensus 157 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg-~~Pf~ 202 (323)
T cd05616 157 T----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG-QAPFE 202 (323)
T ss_pred c----cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhC-CCCCC
Confidence 0 0111233222111111112222346789999999999875 34443
No 56
>KOG0660|consensus
Probab=99.95 E-value=2.1e-28 Score=190.64 Aligned_cols=194 Identities=16% Similarity=0.175 Sum_probs=151.3
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEcccc-----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSE----- 74 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~----- 74 (227)
.+..+|...+.||+|+||.|+.|.++.+|+.||||.+...- ...+..||+.+|+.++ |+||+.+.+.+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRDK 97 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc-CCCcceEEeecccccccc
Confidence 45667888999999999999999999999999999886332 2357889999999999 9999999888765
Q ss_pred CcEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 75 GDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 75 ~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
-+..|+|+|+++.+|..+++. +..++...+..++.|++ +|+.||+|||+|| |+++.. +...++.|||+++
T Consensus 98 f~DvYiV~elMetDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~---~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA---DCDLKICDFGLAR 173 (359)
T ss_pred cceeEEehhHHhhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc---CCCEEecccccee
Confidence 345999999999999999998 45699999999999999 9999999999999 888877 4567999999998
Q ss_pred cCCCc----h---hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHH
Q psy3118 149 TRHPQ----L---HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVL 211 (227)
Q Consensus 149 ~~~~~----~---~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l 211 (227)
...+. . ...+.+|+. |.+-. ...+....++||..|+.+.|++.+. .-|..+..+
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRA-------PElll-~~~~Yt~aiDiWSvGCI~AEmL~gk-plFpG~d~v 234 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRA-------PELLL-NSSEYTKAIDIWSVGCILAEMLTGK-PLFPGKDYV 234 (359)
T ss_pred eccccCcccchhcceeeeeecC-------HHHHh-ccccccchhhhhhhhHHHHHHHcCC-CCCCCCchH
Confidence 66432 0 111222222 22221 1234455788999999999999873 444433333
No 57
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=8.6e-28 Score=194.37 Aligned_cols=190 Identities=18% Similarity=0.159 Sum_probs=143.1
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+|...+.||+|+||.||+|.++.+++.||+|++.... ....+..|..+++.+.+|++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788999999999999999999999999999987542 11346679999999987899999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
||+ |++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. ++..+++|||.+........
T Consensus 81 Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~---~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEEeccccccccCCCCc
Confidence 999 9999999887 46799999999999998 9999999999999 999876 57899999998763211100
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
. .....|++.+..+............++|.+|..+++++.+. .+|.
T Consensus 157 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~-~pf~ 202 (323)
T cd05615 157 T----TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ-PPFD 202 (323)
T ss_pred c----ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCC-CCCC
Confidence 0 01112332221111111112223456788899999988753 3443
No 58
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=6.5e-28 Score=199.57 Aligned_cols=184 Identities=13% Similarity=0.096 Sum_probs=142.5
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.++|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++ ||||+++++++..+...++++|++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEEEEecC
Confidence 457999999999999999999999999999999743 345788999999998 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+++|.+++.. ...+++.+++.++.|++ +|++||||||||| |+++.. .+..+++|||.+........ .
T Consensus 166 ~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~---~~~vkL~DFG~a~~~~~~~~---~ 238 (391)
T PHA03212 166 KTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH---PGDVCLGDFGAACFPVDINA---N 238 (391)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC---CCCEEEEeCCcccccccccc---c
Confidence 8899998877 46799999999999998 9999999999999 888875 57899999998753211100 0
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.+....|++.+..+............++|.+|..+++++.+.
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~ 280 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 111123433321111111122223467889999999988764
No 59
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95 E-value=1.5e-27 Score=192.00 Aligned_cols=178 Identities=16% Similarity=0.116 Sum_probs=136.4
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||+|+||.||+|.+..+++.||+|.+.... ....+.+|+.++++++ ||||+++++.+.+++..++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 699999999999999999999999986532 1234677999999997 999999999999999999999999 999
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHH
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYK 162 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~ 162 (227)
|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.++........ ..
T Consensus 80 L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~---~~~~kl~Dfg~~~~~~~~~~~----~~ 151 (312)
T cd05585 80 LFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY---QGHIALCDFGLCKLNMKDDDK----TN 151 (312)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC---CCcEEEEECcccccCccCCCc----cc
Confidence 9999987 56799999999999998 9999999999999 988876 678999999987642211111 11
Q ss_pred hhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 163 LMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 163 ~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
...|++++..+............++|.+|..+++++.+.
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~ 190 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL 190 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCC
Confidence 122333221111111122233467888899998888763
No 60
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.95 E-value=1.1e-27 Score=191.94 Aligned_cols=190 Identities=18% Similarity=0.207 Sum_probs=145.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|++..... ...+.+|+.+++.++ ||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEEEE
Confidence 4689999999999999999999999999999999865432 235678999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
||++++|.+++......+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+........
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~- 158 (303)
T cd07869 83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD---TGELKLADFGLARAKSVPSH- 158 (303)
T ss_pred ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEECCCCcceeccCCCc-
Confidence 9998899888877556799999999999998 9999999999999 988876 67899999998753221100
Q ss_pred HHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 157 ESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 157 e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.+....+++.. |.. +.+........++|.+|..+++++.+. .+|
T Consensus 159 ---~~~~~~~~~~y~aPE~-~~~~~~~~~~~DiwslG~il~~l~~g~-~pf 204 (303)
T cd07869 159 ---TYSNEVVTLWYRPPDV-LLGSTEYSTCLDMWGVGCIFVEMIQGV-AAF 204 (303)
T ss_pred ---cCCCCcccCCCCChHH-HcCCCCCCcHHHHHHHHHHHHHHHhCC-CCC
Confidence 00001122111 111 112222222357899999999998863 444
No 61
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95 E-value=2e-27 Score=192.60 Aligned_cols=183 Identities=16% Similarity=0.145 Sum_probs=138.9
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.++ ||||+++++++..++..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999999999999999986542 1235677999999998 999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+.+.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.++....... .
T Consensus 80 g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~---~~~~kL~DfG~~~~~~~~~~----~ 151 (328)
T cd05593 80 GELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK---DGHIKITDFGLCKEGITDAA----T 151 (328)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC---CCcEEEecCcCCccCCCccc----c
Confidence 999998876 46799999999999998 9999999999999 998876 67899999998764211100 0
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.....|++++..+............++|.+|..+++++.+. .+|
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~-~Pf 195 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LPF 195 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCC-CCC
Confidence 11122333321111111112223467888999999988763 344
No 62
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.95 E-value=2.9e-27 Score=191.74 Aligned_cols=180 Identities=15% Similarity=0.108 Sum_probs=135.9
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|+++.... ...+.+|..+++.+.+||||+++++++.+.+..++||||+ |
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 468999999999999999999999999875421 2346789999999977999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. .+.+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.++.........
T Consensus 81 g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~---~~~~kL~Dfg~~~~~~~~~~~~--- 153 (329)
T cd05588 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTT--- 153 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC---CCCEEECcCccccccccCCCcc---
Confidence 999998876 47899999999999998 9999999999999 998876 6789999999876321110000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
....|++.+..+............++|.+|..+++++.+
T Consensus 154 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g 192 (329)
T cd05588 154 -STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred -ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHC
Confidence 011232221111111111122245678888888888765
No 63
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95 E-value=1.9e-27 Score=192.15 Aligned_cols=184 Identities=18% Similarity=0.144 Sum_probs=137.4
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|++.... ....+..|.++++.+.+||+|+++++++.+++..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46899999999999999999999999987542 12346678999998877999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+.+.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+.........
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~---~~~~kL~Dfg~~~~~~~~~~~---- 152 (321)
T cd05591 81 GDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA---EGHCKLADFGMCKEGILNGVT---- 152 (321)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEEeecccceecccCCcc----
Confidence 999999887 46799999999999998 9999999999999 998876 678999999977632111100
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.....|++....+............++|.+|..+++++.+ ..+|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg-~~Pf 196 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAG-QPPF 196 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcC-CCCC
Confidence 0111222221111111111222246788889999888875 3444
No 64
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95 E-value=2e-27 Score=192.28 Aligned_cols=180 Identities=15% Similarity=0.129 Sum_probs=137.0
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||++.+..+|..||+|++.... ....+.+|+.+++.++ ||||+++++.+..++..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 46899999999999999999999999986542 1224567999999998 999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+........ .
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~Dfg~~~~~~~~~~----~ 151 (323)
T cd05595 80 GELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK---DGHIKITDFGLCKEGISDGA----T 151 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC---CCCEEecccHHhccccCCCC----c
Confidence 999998877 46799999999999998 9999999999999 998876 67899999997753211100 0
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.....|++.+..+............++|.+|..+++++.+.
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~ 192 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCC
Confidence 01122333222222211112223457888999999988763
No 65
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.95 E-value=2.7e-27 Score=188.18 Aligned_cols=183 Identities=16% Similarity=0.124 Sum_probs=138.7
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
|+..+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.+++.++ |++++++.+++.+++..+++||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEEE
Confidence 7899999999999999999999999999998865321 124678999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+ +++|.+.+... ...+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~---~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD---RGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC---CCCEEEeeCCCcEEcCCCCe
Confidence 99 99998887653 34689999999999988 9999999999999 988875 57799999998764321110
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
+....|+.++..+............++|.+|..+++++.+
T Consensus 158 -----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g 197 (285)
T cd05631 158 -----VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG 197 (285)
T ss_pred -----ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC
Confidence 0111233322111111111222235678888888888875
No 66
>KOG4236|consensus
Probab=99.95 E-value=3.6e-28 Score=197.73 Aligned_cols=176 Identities=20% Similarity=0.229 Sum_probs=145.7
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeec----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
.++||+|.||+||-|.++.+|+.||||++.+- ...+.+.+|+.||+.+. ||+||.+...+++++..|+|||-+ |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~-HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH-HPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC-CCCeeEEEEeecCCceEEEEehhhcc
Confidence 57899999999999999999999999998764 23356889999999998 999999999999999999999999 6
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
--|.-++....+++++.....+..||+ +|-+||+|+|||| |+++.+...-.+++++|||.++... |..+
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg-----EksF 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG-----EKSF 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc-----hhhh
Confidence 667667776678999999999999998 9999999999999 9999887666889999999987543 5566
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPS 193 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~ 193 (227)
-+.+.|+|.+-...-.-..+....++||..|..
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVI 755 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVI 755 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEE
Confidence 667778775433333334455557788877654
No 67
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95 E-value=1.9e-27 Score=191.85 Aligned_cols=184 Identities=18% Similarity=0.116 Sum_probs=136.6
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|.++... .......|..++..+.+||||+++++++..++..++||||+ |
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987542 12345668888887767999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.+........ .
T Consensus 81 g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~---~~~~kL~Dfg~a~~~~~~~~----~ 152 (316)
T cd05592 81 GDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK---DGHIKIADFGMCKENMNGEG----K 152 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC---CCCEEEccCcCCeECCCCCC----c
Confidence 999999887 46799999999999998 9999999999999 998876 67899999998763221110 0
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.....|++.+..+............++|.+|..+++++.+. .+|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~-~Pf 196 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ-SPF 196 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCC-CCC
Confidence 11122333221111111111122356788899888888753 344
No 68
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95 E-value=1.7e-27 Score=192.34 Aligned_cols=184 Identities=20% Similarity=0.163 Sum_probs=137.5
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.++.+++.||+|++.... ....+..|..++..+.+||||+++++++.+.+..++||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46899999999999999999999999986542 12345678899988877999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+..........
T Consensus 81 g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~---~~~~kL~DfG~~~~~~~~~~~~--- 153 (320)
T cd05590 81 GDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH---EGHCKLADFGMCKEGIFNGKTT--- 153 (320)
T ss_pred chHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC---CCcEEEeeCCCCeecCcCCCcc---
Confidence 999998887 46799999999999998 9999999999999 988876 5789999999876421111000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
....|++.+..+............++|.+|..+++++.+ ..+|
T Consensus 154 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~Pf 196 (320)
T cd05590 154 -STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAPF 196 (320)
T ss_pred -cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhC-CCCC
Confidence 111233222111111111122245778889888888875 3444
No 69
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95 E-value=2.6e-27 Score=192.29 Aligned_cols=192 Identities=11% Similarity=0.111 Sum_probs=143.6
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||++.+..+++.+|+|++.+.. ....+..|+.++..++ |++|+++++++.+++..++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEE
Confidence 47999999999999999999999999999999986432 1224677889999887 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ +++|.+++......+++..+..++.|++ +|+.||+|||||| |++++. ++..++.|||.+.......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~---~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC---CCCEEEeecchheecccCC
Confidence 9999 9999999987556799999999999988 8999999999999 988875 6789999999775322111
Q ss_pred hhHHHHHHhhccCCCCCeeeec-----cccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWC-----GSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~-----g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
... .....|++++..+... +........++|.+|..+++++.+ ..+|.
T Consensus 157 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g-~~Pf~ 209 (332)
T cd05623 157 TVQ---SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYG-ETPFY 209 (332)
T ss_pred cce---ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcC-CCCCC
Confidence 000 0011233322111111 111122245788889999888875 34443
No 70
>KOG0612|consensus
Probab=99.95 E-value=1.5e-28 Score=213.93 Aligned_cols=205 Identities=16% Similarity=0.205 Sum_probs=158.6
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec-----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.++|.++++||+|+||.|.+++++.+++.||+|++++. .....|..|-.||..-+ .+=|++++..|++++++|+
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEE
Confidence 46799999999999999999999999999999998763 23345777888988776 7889999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC-
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP- 152 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~- 152 (227)
||||+ ||+|..++.... ++++..++.++..+. +|+.|+||||||| |++++. .|.+++.|||..-....
T Consensus 153 VMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~---~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK---SGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred EEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc---cCcEeeccchhHHhcCCC
Confidence 99999 999999999865 899999999998877 9999999999999 999988 79999999996532211
Q ss_pred -----------chhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHHHHh
Q psy3118 153 -----------QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLFLYN 221 (227)
Q Consensus 153 -----------~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~~~~ 221 (227)
.+.....++....+.. -.+|++. +-|.+|.-+++++.+ .-||=-.++..--.+|..+.
T Consensus 229 G~V~s~~aVGTPDYISPEvLqs~~~~~-----g~yG~ec-----DwWSlGV~~YEMlyG-~TPFYadslveTY~KIm~hk 297 (1317)
T KOG0612|consen 229 GTVRSSVAVGTPDYISPEVLQSQGDGK-----GEYGREC-----DWWSLGVFMYEMLYG-ETPFYADSLVETYGKIMNHK 297 (1317)
T ss_pred CcEEeccccCCCCccCHHHHHhhcCCc-----cccCCcc-----chhhhHHHHHHHHcC-CCcchHHHHHHHHHHHhchh
Confidence 1111222222222211 1234443 347889888888887 45564456666666777777
Q ss_pred hhccc
Q psy3118 222 TRLCF 226 (227)
Q Consensus 222 ~~~~~ 226 (227)
+.++|
T Consensus 298 ~~l~F 302 (1317)
T KOG0612|consen 298 ESLSF 302 (1317)
T ss_pred hhcCC
Confidence 77766
No 71
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=5.6e-27 Score=190.23 Aligned_cols=186 Identities=14% Similarity=0.195 Sum_probs=141.1
Q ss_pred eEEEEeeecccCcceEEEEEEc---CCCcEEEEEEeeecC------CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNI---STGEEVAIKLECIKT------RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
+|++.+.||+|+||.||++.+. .+++.+|+|++.... ....+..|+.+++.+++|++|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999863 578899999986532 1234677999999998899999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 79 VMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
+++|||+ +++|.+++.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..+++|||.+....
T Consensus 81 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~---~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS---EGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC---CCCEEEeeCcCCcccc
Confidence 9999999 9999999877 46799999999999998 9999999999999 998876 5789999999876432
Q ss_pred CchhhHHHHHHhhccCCCCCeeee-ccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 152 PQLHIESKIYKLMQGGVGIPQIKW-CGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~p~~~~-~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
....... ....|+.++..... .+........++|.+|..+++++.+
T Consensus 157 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg 203 (332)
T cd05614 157 SEEKERT---YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTG 203 (332)
T ss_pred ccCCCcc---ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcC
Confidence 1111000 01123332211111 1222222346788899999998875
No 72
>KOG0662|consensus
Probab=99.95 E-value=9.8e-28 Score=171.19 Aligned_cols=197 Identities=18% Similarity=0.146 Sum_probs=155.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.+|+-.+.||+|+||+||+|+++.+++.||+|.++.+... ....+|+.+++.|+ |.||+++++....++..-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk-hknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeH
Confidence 3567778999999999999999999999999999876543 35788999999999 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|||..+|..++...++.++...++.++.|++ +|+.+++|||+|| |.++.. +|+.++.|||+++.-.-...
T Consensus 81 e~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~---ngelkladfglarafgipvr- 156 (292)
T KOG0662|consen 81 EFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR---NGELKLADFGLARAFGIPVR- 156 (292)
T ss_pred HHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc---CCcEEecccchhhhcCCceE-
Confidence 9999999999999889999999999999998 9999999999999 777776 79999999999875332111
Q ss_pred HHHHHHhh-ccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHH
Q psy3118 157 ESKIYKLM-QGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVL 211 (227)
Q Consensus 157 e~~~y~~l-~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l 211 (227)
.|+.- ..-..-|.-..+|..-....+.||.-|..+.|+-+...+-|....+.
T Consensus 157 ---cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd 209 (292)
T KOG0662|consen 157 ---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209 (292)
T ss_pred ---eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence 11110 00011122333444444446789999999999887644555544443
No 73
>KOG0192|consensus
Probab=99.95 E-value=2.6e-27 Score=191.81 Aligned_cols=196 Identities=20% Similarity=0.242 Sum_probs=145.1
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcE-EEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCc-EEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEE-VAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGD-YNVMV 81 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~-~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv 81 (227)
...+.+.+|+|+||+||++.+ .|.. ||+|.+..... ...+.+|+.+|.+++ ||||+++++++.++. ...+|
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEE
Confidence 345667799999999999998 5555 99999865432 236899999999998 999999999999987 78999
Q ss_pred EeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccc-eeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 82 MELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPG-IIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~-iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
|||+ +|+|.+++... ...+++..++.++.|++ +|+++ |||||||| |++++.+. ...++.|||.++....
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKVI 196 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC--CEEEECCCccceeecc
Confidence 9999 99999999873 67899999999999999 99999 99999999 88888741 4889999999875543
Q ss_pred chhhHHHHHHhhccCCCCCeeeecccc-------CCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHH
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIKWCGSE-------GDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLF 218 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~~~g~~-------~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~ 218 (227)
.. ...+...|| ..|..++ ......+...+|..+|++..+ ..+|.-..-..++..+.
T Consensus 197 ~~----~~~~~~~GT-----~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~-~~Pf~~~~~~~~~~~v~ 259 (362)
T KOG0192|consen 197 SK----TSMTSVAGT-----YRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG-EIPFEDLAPVQVASAVV 259 (362)
T ss_pred cc----ccccCCCCC-----ccccChhhhcCCCCcCCccchhhhHHHHHHHHHHC-CCCCCCCCHHHHHHHHH
Confidence 21 000112232 2333322 112234456778889998886 45554333344444444
No 74
>KOG0589|consensus
Probab=99.95 E-value=1.2e-27 Score=193.77 Aligned_cols=204 Identities=15% Similarity=0.104 Sum_probs=162.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcE-EEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY-NVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~-~~l 80 (227)
.++|.+++.+|+|+||.+++++++.++..+++|.+..... +.....|+.+++++. ||||+.+.+.+..++. .+|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence 3579999999999999999999999999999999876542 224677999999998 9999999999998887 999
Q ss_pred EEeCC-CCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 81 VMELL-GPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
||+|| ||++.+.+...+ ..|+++.+..++.|++ +|++.|+|||||+ |+++.+ ++.+++-|||.++...+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk---~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK---DKKVKLGDFGLAKILNP 158 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc---cCceeecchhhhhhcCC
Confidence 99999 999999998864 6799999999999998 9999999999999 999887 56679999999998776
Q ss_pred chhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHH
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLF 218 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~ 218 (227)
... .-..+.|++......-........--++|.||+.++|+..- .+.|.-..+..++.++.
T Consensus 159 ~~~----~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~l-k~aF~a~~m~~Li~ki~ 219 (426)
T KOG0589|consen 159 EDS----LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTL-KPAFKASNMSELILKIN 219 (426)
T ss_pred chh----hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhc-ccccCccchHHHHHHHh
Confidence 542 22334465543222111111222235789999999998875 67777666666666654
No 75
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.94 E-value=5.7e-27 Score=189.04 Aligned_cols=184 Identities=17% Similarity=0.120 Sum_probs=137.4
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..++..||+|.++... .......|..++..+.+||+|+++++++.+++..|+||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999987542 22346678888887766999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. ++..+++|||.++........
T Consensus 81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~---- 152 (316)
T cd05620 81 GDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR---DGHIKIADFGMCKENVFGDNR---- 152 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC---CCCEEeCccCCCeecccCCCc----
Confidence 999999887 46799999999999998 9999999999999 999876 578999999977532111000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.....|++++..+............++|.+|..+++++.+. .+|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~-~Pf 196 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQ-SPF 196 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCC-CCC
Confidence 01112333221111111112223466788899999988753 344
No 76
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.94 E-value=7.8e-27 Score=188.82 Aligned_cols=183 Identities=18% Similarity=0.115 Sum_probs=135.8
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhc--CCCCCCeeEEccccCcEEEEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv 81 (227)
|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+|+.++..++ +||||+++++++.+++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 688999999999999999999999999999987542 1235667777665443 399999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ |++|...+.. ..+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.+.......
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~---~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT---EGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC---CCcEEeCcccCCccCCCCC
Confidence 9999 9999888764 5799999999999998 9999999999999 998876 5789999999775322111
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
... ....|++....+............++|.+|..+++++.+
T Consensus 156 ~~~----~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G 197 (324)
T cd05589 156 DRT----STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVG 197 (324)
T ss_pred Ccc----cccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhC
Confidence 000 011222221111111111222235678888888888765
No 77
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.94 E-value=1.1e-26 Score=184.66 Aligned_cols=192 Identities=15% Similarity=0.077 Sum_probs=141.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.++ |+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999865422 235778999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
||+.+++.+.+......+++..++.++.|++ +|+.||+|||||| |++++. ++..++.|||.+.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH---NDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCcEEEeeccCcccccccccc
Confidence 9994344444544356799999999999998 9999999999999 888865 678999999987643221110
Q ss_pred HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.+....|+++...+............++|.+|..+++++.+ ..+|.
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g-~~pf~ 202 (287)
T cd07848 157 ---NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDG-QPLFP 202 (287)
T ss_pred ---cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhC-CCCCC
Confidence 00111222221111111111222346788999999999876 34554
No 78
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=6.4e-27 Score=198.42 Aligned_cols=192 Identities=18% Similarity=0.113 Sum_probs=142.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCC-CcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNIST-GEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~-~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+..... ...+.+|+.+++.++ ||||+++++++..++..|+|||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEEEEE
Confidence 4599999999999999999998777 78899997644322 235677999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 84 LL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 84 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|+ |++|.+.+... ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.+......
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~---~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP---TGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC---CCcEEEEeCcCceecCCc
Confidence 99 99999887642 34689999999999998 8999999999999 988876 678999999988643221
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
... .......|++++..+............++|.+|..+++++.+. .+|
T Consensus 223 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~-~Pf 271 (478)
T PTZ00267 223 VSL--DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLH-RPF 271 (478)
T ss_pred ccc--ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCC-CCC
Confidence 110 0011122443322221111222223456788898888888753 344
No 79
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.94 E-value=4e-27 Score=191.32 Aligned_cols=192 Identities=17% Similarity=0.198 Sum_probs=140.1
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccC-----cEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEG-----DYN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~-----~~~ 78 (227)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ...++.+|+.++++++ ||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCceE
Confidence 6999999999999999999999999999999886432 1235778999999998 99999998876432 358
Q ss_pred EEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 79 VMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
++||||++++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.++....
T Consensus 80 ~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~---~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 80 YVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCcEEEccCcccccccc
Confidence 99999998899999887 46799999999999998 9999999999999 988876 67899999998764321
Q ss_pred chhhHHHHHHhhccCCCCCeeeeccc--cCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIKWCGS--EGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~~~g~--~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
..... ..+....|++....+...+. .......++|.+|..+++++.+ ..+|.
T Consensus 156 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg-~~pf~ 209 (338)
T cd07859 156 DTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFP 209 (338)
T ss_pred ccCcc-ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcC-CCCCC
Confidence 11000 01111122222111111111 1112245678899999998876 34453
No 80
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.94 E-value=8.1e-27 Score=188.80 Aligned_cols=132 Identities=17% Similarity=0.229 Sum_probs=115.6
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++ ||||+++++++..++..++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999999999999999987542 1134567899999998 999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+++.. ...+++.++..++.|++ +|+ .||+|||||| |++++. .+..++.|||.++.
T Consensus 80 ~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~---~~~~kL~Dfg~~~~ 145 (325)
T cd05594 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKE 145 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC---CCCEEEecCCCCee
Confidence 999998876 46799999999999998 997 8999999999 888876 67899999998753
No 81
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94 E-value=1.1e-26 Score=186.80 Aligned_cols=195 Identities=16% Similarity=0.174 Sum_probs=145.5
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
-++|.+.+.||+|+||.||+|.+..+++.+|+|.++.... ...+.+|++++++++ |+||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEEE
Confidence 3579999999999999999999999999999999865432 235678999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
||++++|.+++......+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+.........
T Consensus 84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE---RGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEECccccceecCCCccc
Confidence 9997799998877556689999999999988 9999999999999 998876 678999999987632211100
Q ss_pred HHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHH
Q psy3118 157 ESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTV 210 (227)
Q Consensus 157 e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~ 210 (227)
.....+++.+ |.. ..+........++|.+|..+++++.+ ..+|...+.
T Consensus 161 ----~~~~~~~~~y~aPE~-~~~~~~~~~~~DiwslG~il~el~tg-~~pf~~~~~ 210 (309)
T cd07872 161 ----YSNEVVTLWYRPPDV-LLGSSEYSTQIDMWGVGCIFFEMASG-RPLFPGSTV 210 (309)
T ss_pred ----cccccccccccCCHH-HhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCh
Confidence 0000111111 111 11111122235678889999999886 345543333
No 82
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.94 E-value=5.2e-27 Score=190.85 Aligned_cols=141 Identities=14% Similarity=0.232 Sum_probs=116.7
Q ss_pred cCeEEEEeeecccCcceEEEEEE-----cCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccC-c
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTN-----ISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEG-D 76 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~-----~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~-~ 76 (227)
.++|++.+.||+|+||.||+|.+ ..++..||+|.+..... ...+.+|+.+++.+.+||||+++++++... +
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 46899999999999999999975 23456899999864322 235788999999996699999999877654 4
Q ss_pred EEEEEEeCC-CCCHHHHHhhCC----------------------------------------------------------
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCS---------------------------------------------------------- 97 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~---------------------------------------------------------- 97 (227)
..+++|||+ +|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 689999999 999999987521
Q ss_pred ---CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 98 ---RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 98 ---~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.++.
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~---~~~~kl~DfG~a~~ 223 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE---NNVVKICDFGLARD 223 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC---CCcEEEeecccccc
Confidence 2477888888999998 9999999999999 888865 57899999998864
No 83
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94 E-value=1.2e-26 Score=188.06 Aligned_cols=184 Identities=15% Similarity=0.111 Sum_probs=139.1
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.+|+|++..... ...+.+|+.++.++.+|++|+.+++++.+.+..++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999875421 2346789999999988999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.+..........
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~---~~~~kl~Dfg~~~~~~~~~~~~--- 153 (327)
T cd05617 81 GDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA---DGHIKLTDYGMCKEGLGPGDTT--- 153 (327)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC---CCCEEEeccccceeccCCCCce---
Confidence 999998876 46799999999999998 9999999999999 998876 5789999999776321110000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
....|++.+..+............++|.+|..+++++.+. .+|
T Consensus 154 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~-~pf 196 (327)
T cd05617 154 -STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR-SPF 196 (327)
T ss_pred -ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCC-CCC
Confidence 0112333221111111112223467888899999888763 444
No 84
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94 E-value=1.2e-26 Score=187.73 Aligned_cols=180 Identities=17% Similarity=0.175 Sum_probs=130.3
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHH-HHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKI-YKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~-l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|+||.||+|.+..+|+.+|+|++..... ...+..|..+ ++.++ ||||+++++.+..++..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence 468999999999999999999999999865421 1234555554 55566 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+++|.+.+.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..+++|||.++.........
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~---~~~~kL~DfG~~~~~~~~~~~~-- 153 (325)
T cd05604 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS---QGHVVLTDFGLCKEGIAQSDTT-- 153 (325)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC---CCCEEEeecCCcccCCCCCCCc--
Confidence 9999988876 56899999999999998 9999999999999 998876 6789999999876322111100
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
....|++....+............++|.+|..+++++.+.
T Consensus 154 --~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~ 193 (325)
T cd05604 154 --TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred --ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCC
Confidence 0111222111111111111122356788888888887653
No 85
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.94 E-value=9.5e-27 Score=187.73 Aligned_cols=184 Identities=17% Similarity=0.128 Sum_probs=136.4
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|.++... .......|..+++.+.+||||+++++++.+++..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999999999999999987642 22345668888887766999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.+.........
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~---- 152 (316)
T cd05619 81 GDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT---DGHIKIADFGMCKENMLGDAK---- 152 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC---CCCEEEccCCcceECCCCCCc----
Confidence 999999987 46799999999999998 9999999999999 998876 577999999987532111000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.....|++.+..+............++|.+|..+++++.+. .+|
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~-~pf 196 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ-SPF 196 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCC-CCC
Confidence 00112222211111111112223456788898888888753 344
No 86
>KOG1187|consensus
Probab=99.94 E-value=7.4e-27 Score=190.05 Aligned_cols=140 Identities=22% Similarity=0.252 Sum_probs=121.6
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCc-EEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGD-YNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~ 82 (227)
.++|.-.+.||+|+||.||+|.. .++..||||.+..... ...|.+|++++.+++ |||++++++||.+.+ ...||+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~LVY 151 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLLVY 151 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEEEE
Confidence 35678889999999999999995 4558999998766544 356999999999999 999999999999988 599999
Q ss_pred eCC-CCCHHHHHhhCCC-CcCHHHHHHHHHHhc-----cccc---ceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 83 ELL-GPSLEDLFNFCSR-RFSLKTVLLLADQLS-----ITAP---GIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~-~~~~~~~~~i~~qi~-----lh~~---~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
||+ .|||.+.+..... .++|.....|+.+++ ||.. .|||||||| ||+++. +...++.|||+++..
T Consensus 152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~---~~~aKlsDFGLa~~~ 227 (361)
T KOG1187|consen 152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE---DFNAKLSDFGLAKLG 227 (361)
T ss_pred EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC---CCCEEccCccCcccC
Confidence 999 9999999987544 899999999999998 8874 499999999 999997 577889999998543
No 87
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.94 E-value=1.3e-26 Score=194.57 Aligned_cols=190 Identities=22% Similarity=0.181 Sum_probs=138.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEcccc--------CcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSE--------GDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--------~~~ 77 (227)
.++|++++.||+|+||.||+|.+..+++.||||.+... .....+|+.+++.++ |+||+++++++.. ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~--~~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD--PQYKNRELLIMKNLN-HINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC--cchHHHHHHHHHhcC-CCCCcceeeeEeecccccCCCceE
Confidence 46899999999999999999999999999999987543 233567999999998 9999999776532 235
Q ss_pred EEEEEeCCCCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 78 NVMVMELLGPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
.++||||++++|.+++... ...+++..++.++.|++ +|++||+|||||| |++++.+ .+..+++|||.++
T Consensus 142 l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~--~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN--THTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC--CCceeeeccccch
Confidence 7899999988888877642 46799999999999998 9999999999999 9988754 4568999999886
Q ss_pred cCCCchhhHHHHHHhhccCCCCCeee-eccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 149 TRHPQLHIESKIYKLMQGGVGIPQIK-WCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 149 ~~~~~~~~e~~~y~~l~g~~g~p~~~-~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
......... ...|++.+..+. ..+........++|.+|..+++++.+. .+|.
T Consensus 220 ~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~-~pf~ 272 (440)
T PTZ00036 220 NLLAGQRSV-----SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY-PIFS 272 (440)
T ss_pred hccCCCCcc-----cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC-CCCC
Confidence 432211000 011222111111 112222223456899999999999874 4554
No 88
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.94 E-value=2.5e-26 Score=182.83 Aligned_cols=191 Identities=13% Similarity=0.142 Sum_probs=138.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcC-CCcEEEEEEeeecCC----CCchhhHHHHHHHhc--CCCCCCeeEEccc-----c
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNIS-TGEEVAIKLECIKTR----HPQLHIESKIYKLMQ--GGVGIPQIKWCGS-----E 74 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~--~~~~i~~~~~~~~-----~ 74 (227)
++|++.+.||+|+||.||+|.+.. +++.+|+|.+..... .....+|+.+++.++ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 568899998865432 224667888888875 4999999998764 3
Q ss_pred CcEEEEEEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 75 GDYNVMVMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 75 ~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
....+++|||++++|.+++... ...+++.++..++.|++ +|++||+|||||| |+++.. .+..+++|||.+
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~---~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC---CCCEEEccccce
Confidence 4568999999988999998764 34689999999999998 9999999999999 998876 578999999987
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
........ .....|++....+............++|.+|..+++++.+ ..+|.
T Consensus 158 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~~f~ 210 (290)
T cd07862 158 RIYSFQMA-----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR-KPLFR 210 (290)
T ss_pred EeccCCcc-----cccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC-CCCcC
Confidence 64322110 0011122211111111111122246789999999999875 34454
No 89
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.94 E-value=1.5e-26 Score=187.61 Aligned_cols=180 Identities=15% Similarity=0.107 Sum_probs=135.2
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.+|+|++.+... ...+.+|+.++.++.+||||+++++++...+..++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 469999999999999999999999999875421 1246778999988877999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.++.........
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~---~~~~kL~DfG~~~~~~~~~~~~--- 153 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTT--- 153 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC---CCCEEEeeCCccccccCCCCcc---
Confidence 999988877 46799999999999998 9999999999999 999876 6789999999876321111000
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
....|++.+-.+............++|.+|..+++++.+
T Consensus 154 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (329)
T cd05618 154 -STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 192 (329)
T ss_pred -ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhC
Confidence 011222221111111111112245678888888888875
No 90
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.94 E-value=1.9e-26 Score=186.52 Aligned_cols=179 Identities=17% Similarity=0.206 Sum_probs=134.8
Q ss_pred eeecccCcceEEEEEEc---CCCcEEEEEEeeecC------CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 13 RKIGSGSFGDIYLGTNI---STGEEVAIKLECIKT------RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+.||+|+||.||+|.+. .+++.||+|++.... ....+..|+.+++.++ ||||+++++.+..++..+++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 67999999999999863 478899999986532 1124678999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|+ +++|.+.+.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.++........
T Consensus 81 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 81 YLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA---QGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred CCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEeeCcCCeecccCCCc
Confidence 99 9999999987 56789999999999988 9999999999999 999876 678999999987532211110
Q ss_pred HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
. ....|++.+..+............++|.+|..+++++.+
T Consensus 157 ~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G 196 (323)
T cd05584 157 T----HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTG 196 (323)
T ss_pred c----cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcC
Confidence 0 111233322122211122222346788889998888775
No 91
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.94 E-value=9.7e-27 Score=187.80 Aligned_cols=132 Identities=19% Similarity=0.275 Sum_probs=115.5
Q ss_pred eeecccCcceEEEEEE---cCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 13 RKIGSGSFGDIYLGTN---ISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~---~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
+.||+|+||.||++.+ ..+|+.+|+|++.... ....+.+|++++++++ ||||+++++.+.+++..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcCC
Confidence 6799999999999986 3578999999987542 2234677999999998 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..++.|||.+..
T Consensus 81 ~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kL~Dfg~~~~ 147 (318)
T cd05582 81 RGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE---EGHIKLTDFGLSKE 147 (318)
T ss_pred CCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC---CCcEEEeeccCCcc
Confidence 9999999876 46799999999999998 9999999999999 988876 57899999998764
No 92
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94 E-value=2.7e-26 Score=185.62 Aligned_cols=179 Identities=17% Similarity=0.180 Sum_probs=130.4
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHH-HHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESK-IYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|+||+||+|.+..+++.||+|++..... ...+..|.. +++.++ ||||+++++.+.+++..++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 468999999999999999999999999865421 123444554 456676 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+..........
T Consensus 80 ~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~---~~~~kl~Dfg~~~~~~~~~~~~-- 153 (323)
T cd05575 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGIEHSKTT-- 153 (323)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC---CCcEEEeccCCCcccccCCCcc--
Confidence 9999999887 56799999999999998 9999999999999 998876 6789999999876321111100
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
....|++.+..+............++|.+|..+++++.+
T Consensus 154 --~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g 192 (323)
T cd05575 154 --STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG 192 (323)
T ss_pred --ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcC
Confidence 011122211111111111122235678888888888765
No 93
>KOG0610|consensus
Probab=99.94 E-value=3.3e-27 Score=186.83 Aligned_cols=138 Identities=22% Similarity=0.317 Sum_probs=124.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++++.||+|.-|+||+|..+.+++.+|+|++.+.. +..++..|.+||+.+. ||.++++|..++.+++.+++
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEE
Confidence 35788899999999999999999999999999997752 2346788999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||| ||+|..++++. ++.|++..++-++.+++ ||-.|||.||||| ||++-. +|.+.+.||.++.
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvre---dGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRE---DGHIMLSDFDLSL 227 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEec---CCcEEeeeccccc
Confidence 9999 99999999886 67899999999999988 9999999999999 777765 7999999998664
No 94
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94 E-value=2e-26 Score=203.21 Aligned_cols=140 Identities=22% Similarity=0.343 Sum_probs=120.9
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||+|.+..+.. ..++.+|++++++++ ||||+++++++.+++..+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEE
Confidence 689999999999999999999999999999999865322 235788999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhC----------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 82 MELL-GPSLEDLFNFC----------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~----------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
|||+ |++|.+++... ....+...+..++.|++ +|++||+|||||| |++++. .+..+++||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~---dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL---FGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC---CCCEEEEec
Confidence 9999 99999998642 12456677888888888 9999999999999 888876 678999999
Q ss_pred eccccC
Q psy3118 145 ECIKTR 150 (227)
Q Consensus 145 ~~~~~~ 150 (227)
|.+...
T Consensus 158 GLAk~i 163 (932)
T PRK13184 158 GAAIFK 163 (932)
T ss_pred Ccceec
Confidence 987643
No 95
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.94 E-value=3.3e-26 Score=185.27 Aligned_cols=180 Identities=16% Similarity=0.144 Sum_probs=130.9
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHH-HHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESK-IYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|+||.||+|.+..+++.+|+|++..... ...+..|.. +++.++ |+||+++++.+.+.+..++||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC
Confidence 469999999999999999999999999865321 113344444 456666 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+++|.+++.. ...+++..+..++.|++ +|+.||+|||||| |++++. .+..+++|||.++........
T Consensus 80 ~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~---~~~~kl~DfG~a~~~~~~~~~--- 152 (325)
T cd05602 80 GGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNGT--- 152 (325)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC---CCCEEEccCCCCcccccCCCC---
Confidence 9999999987 56789999999999998 9999999999999 998875 678999999987632111000
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.....|++.+..+............++|.+|..+++++.+.
T Consensus 153 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (325)
T cd05602 153 -TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193 (325)
T ss_pred -cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCC
Confidence 01112332221111111111223456788899998888763
No 96
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.94 E-value=7.3e-26 Score=179.99 Aligned_cols=188 Identities=16% Similarity=0.126 Sum_probs=139.8
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.|++.+.||+|+||.||++.+..+++.||+|.+..... ...+.+|+.+++.++ |+||+++++.+.+++..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEE
Confidence 48899999999999999999999999999998865321 124677999999997 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
||+ +++|.+.+... ...+++.++..++.|++ +|+.|++|||||| |++++. .+...+.|||.+.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD---YGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC---CCCEEEeeCCCceecCCCC
Confidence 999 99999888653 35699999999999998 9999999999999 988876 5779999999776432111
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
. +....|+..................+.|.+|..+++++.+ ..+|
T Consensus 157 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g-~~pf 201 (285)
T cd05605 157 T-----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG-KSPF 201 (285)
T ss_pred c-----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC-CCCC
Confidence 0 0011122211111111111112234678888888888875 3444
No 97
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.94 E-value=2.4e-26 Score=185.51 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=117.3
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.||+|++.+.. ....+.+|.++++.+.+||||+++++++.+.+..++||||+ |
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999987542 22356779999998877999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+.+.. ...+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+..
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~~~~ 145 (318)
T cd05570 81 GDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS---EGHIKIADFGMCKE 145 (318)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC---CCcEEecccCCCee
Confidence 999998887 46799999999999998 9999999999999 998876 57899999997753
No 98
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=3.4e-26 Score=194.44 Aligned_cols=195 Identities=18% Similarity=0.155 Sum_probs=141.2
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCc----
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGD---- 76 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---- 76 (227)
..++|.+.+.||+|+||.||+|.+..+++.||||.+...... ..+.+|+.++..+. |+|+++++..+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccCc
Confidence 457999999999999999999999999999999998654322 35677999999997 999999876654321
Q ss_pred ----EEEEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEE
Q psy3118 77 ----YNVMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAI 142 (227)
Q Consensus 77 ----~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~ 142 (227)
..++||||+ +|+|.++++.. ...+++.++..++.|++ +|++||+|||||| |++++. ++..++.
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~---~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC---CCCEEEE
Confidence 378999999 99999998753 35789999999999998 9999999999999 999976 6789999
Q ss_pred eeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 143 KLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 143 ~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
|||.++......... ......|++++..+............++|.+|..+++++.+ ..+|.
T Consensus 186 DFGls~~~~~~~~~~--~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG-~~Pf~ 246 (496)
T PTZ00283 186 DFGFSKMYAATVSDD--VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTL-KRPFD 246 (496)
T ss_pred ecccCeecccccccc--ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHC-CCCCC
Confidence 999876432211100 01112233322111111111122235678889888888875 34554
No 99
>KOG0582|consensus
Probab=99.94 E-value=2.8e-26 Score=183.15 Aligned_cols=186 Identities=18% Similarity=0.227 Sum_probs=148.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.+.|++.+.||.|.-++||+|+...++..||||++..+... +.+.+|+..|+.++ ||||++.+..|..++.+|+||
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEEee
Confidence 46799999999999999999999999999999999765433 56889999999998 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc-
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ- 153 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~- 153 (227)
.|+ +||+.++++.. ...+++..+..|.++++ +|.+|.||||||+ ||+++. +|.+++.|||-+-.....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~---dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDS---DGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcC---CCcEEEcCceeeeeecccC
Confidence 999 99999999976 56799999999999999 9999999999999 999988 799999999855422111
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccccC------Cee-EEEeeccCCCHHHHHhHc
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSEG------DYN-VMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~~------~~~-~~vm~~lg~~l~~l~~~~ 201 (227)
......+ ....|+ ++|..++- .|. .-++|.+|-+.-||.++-
T Consensus 181 ~R~~~rf-~tfvgt-----p~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~ 229 (516)
T KOG0582|consen 181 DRQVTRF-NTFVGT-----PCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGH 229 (516)
T ss_pred ceeeEee-ccccCc-----ccccChHHhhhcccCccchhhhhhhhHHHHHHhcCC
Confidence 1111122 333343 34544332 222 345788888887877763
No 100
>KOG0604|consensus
Probab=99.94 E-value=1.1e-27 Score=182.65 Aligned_cols=193 Identities=16% Similarity=0.094 Sum_probs=155.3
Q ss_pred ecCeEEE-EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEcccc----CcEEE
Q psy3118 5 VGNKYRL-GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSE----GDYNV 79 (227)
Q Consensus 5 ~~~~y~~-~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~----~~~~~ 79 (227)
+.++|.+ -++||-|-.|.|..|.++.|++.+|+|++ .+.+...+|+++.-..++|+|||.+.+.+++ ...+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL---~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVL---LDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHH---hcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 5567776 46799999999999999999999999988 3444567899999999999999999988875 46799
Q ss_pred EEEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 80 MVMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
+|||.+ ||.|++.++.. ...|++.++..|++||. +|+.+|.|||||| |++......+.-.++.|||.++...
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999 99999999986 45799999999999998 9999999999999 8887776666778999999998654
Q ss_pred CchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 152 PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
....+. ..+-||.+....-.|++.......||.+|..++-|..+-+..+
T Consensus 216 ~~~~L~-----TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFY 264 (400)
T KOG0604|consen 216 EPGDLM-----TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264 (400)
T ss_pred CCcccc-----CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCccc
Confidence 333333 3344555544455677777777888999988877765554444
No 101
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=5.1e-26 Score=186.42 Aligned_cols=182 Identities=15% Similarity=0.174 Sum_probs=139.5
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
..+|++.+.||+|+||.||+|.+..++..||+|+... .....|+.++++++ |+||+++++++...+..++|||++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~----~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK----GTTLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc----cccHHHHHHHHhCC-CCCCcChhheEEeCCeeEEEEEcc
Confidence 4469999999999999999999999999999997422 23467999999998 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
.++|.+++......+++.++..++.|++ +|++||||||||| |+++.. .+..+++|||.+........
T Consensus 140 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~---~~~~kl~DfG~a~~~~~~~~---- 212 (357)
T PHA03209 140 SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND---VDQVCIGDLGAAQFPVVAPA---- 212 (357)
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEEecCccccccccCcc----
Confidence 8899998877567899999999999998 9999999999999 888876 57789999998763211100
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.....|+.....+............++|.+|..+++++..
T Consensus 213 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~ 252 (357)
T PHA03209 213 -FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAY 252 (357)
T ss_pred -cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHc
Confidence 0111233222111111111222345678889999988764
No 102
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94 E-value=5e-26 Score=184.65 Aligned_cols=189 Identities=14% Similarity=0.077 Sum_probs=144.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.++|++.+.||+|+||.||++.+..++..+|+|.+..... ...+.+|+++++.++ |+||+++++++..++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEEe
Confidence 5789999999999999999999999999999999865422 246888999999998 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----cccc-ceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAP-GIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~-~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
||+ +++|.+++.. ...+++..+..++.|++ +|++ +|+|||||| |+++.. .+..++.|||.+.......
T Consensus 83 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 83 EHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred ecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC---CCcEEEccCcccccccccc
Confidence 999 9999999987 46789999999999988 8975 699999999 888866 5789999999876432111
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
. ....|+..+..+............++|.+|..+++++.+ ..+|.
T Consensus 159 ~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg-~~p~~ 203 (331)
T cd06649 159 A------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG-RYPIP 203 (331)
T ss_pred c------ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhC-CCCCC
Confidence 0 011222221111111111122235678899999999876 34453
No 103
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=3.7e-26 Score=191.97 Aligned_cols=187 Identities=14% Similarity=0.109 Sum_probs=140.6
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.+..|.+.+.||+|+||.||+|.+..+++.||+|... .....+|++++++++ |+||+++++++..++..+++||+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEEEEc
Confidence 3568999999999999999999999999999999632 234678999999998 99999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 85 LGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
+.++|.+++......+++.+++.++.|++ +|++||||||||| |+++.. .+..++.|||.++........
T Consensus 242 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~---~~~vkL~DFGla~~~~~~~~~-- 316 (461)
T PHA03211 242 YRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG---PEDICLGDFGAACFARGSWST-- 316 (461)
T ss_pred cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC---CCCEEEcccCCceeccccccc--
Confidence 98899998876556799999999999998 9999999999999 988876 577999999987643211100
Q ss_pred HHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 159 KIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 159 ~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.......|+..+...............++|.+|..++++..+.
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~ 359 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHT 359 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcC
Confidence 0001122333221111111111122346788898888876543
No 104
>KOG0578|consensus
Probab=99.94 E-value=1.1e-26 Score=190.08 Aligned_cols=184 Identities=23% Similarity=0.242 Sum_probs=150.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
..|.....||+|+-|.||.|....+++.||||.+.... ..+-+.+|+.+|+.++ |+|||.+++.+...+.+|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc-chHHHHHHHHhcccceeEEEEee
Confidence 46888999999999999999999999999999987643 3456888999999998 99999999999989999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
+ ||+|.|++.. ..+++.++..++++++ ||.+||||||||. ||++.. .|.+++.|||.+....+...
T Consensus 352 m~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~---~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 352 MEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM---DGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred cCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc---CCcEEEeeeeeeeccccccC--
Confidence 9 9999999996 5699999999999998 9999999999999 888887 68899999997654333221
Q ss_pred HHHHHhhccCCCCCeeeeccccC----C-eeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 158 SKIYKLMQGGVGIPQIKWCGSEG----D-YNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 158 ~~~y~~l~g~~g~p~~~~~g~~~----~-~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.-..+.||| ||..++- . ..-.++|.||--..|++++.+.-|
T Consensus 425 --KR~TmVGTP-----YWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYl 470 (550)
T KOG0578|consen 425 --KRSTMVGTP-----YWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYL 470 (550)
T ss_pred --ccccccCCC-----CccchhhhhhcccCccccchhhhhHHHHHhcCCCCcc
Confidence 123445655 6655541 1 223557999998889888866555
No 105
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94 E-value=5.5e-26 Score=183.65 Aligned_cols=180 Identities=18% Similarity=0.171 Sum_probs=130.7
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHH-HHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESK-IYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~-~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|+||.||+|.+..+++.+|+|++.... ....+..|.. +++.++ |+||+++++.+.+++..++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCC
Confidence 46999999999999999999999999986532 1123445554 566776 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+++|.+.+.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..++.|||.+..........
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~---~~~~kl~Dfg~~~~~~~~~~~~-- 153 (321)
T cd05603 80 GGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGVEPEETT-- 153 (321)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC---CCCEEEccCCCCccCCCCCCcc--
Confidence 9999988876 56799999999999998 9999999999999 999876 6789999999876421111100
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
....|++.+..+............++|.+|..+++++.+.
T Consensus 154 --~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (321)
T cd05603 154 --STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGL 193 (321)
T ss_pred --ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCC
Confidence 0111222211111111111122356788888888887653
No 106
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.94 E-value=9.5e-26 Score=179.69 Aligned_cols=182 Identities=16% Similarity=0.172 Sum_probs=141.9
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||++.+..+++.+|+|.+.... ..+.+.+|++++++++ ||||+++++++.+++..+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEE
Confidence 47999999999999999999999999999999986532 2245788999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ +++|.+++.. ...+++..+..++.|++ +|++|++|+||+| |+++.. .+..++.|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~---~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 80 MEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC---CCCEEEeeCCCccccCCCC
Confidence 9999 9999999987 47799999999999998 9999999999999 988876 5779999999776432210
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
....+++++...............++|.+|..+++++.+
T Consensus 156 -------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 194 (290)
T cd05580 156 -------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAG 194 (290)
T ss_pred -------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhC
Confidence 011122211111111111222346778888888888765
No 107
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.94 E-value=2.8e-26 Score=189.09 Aligned_cols=140 Identities=14% Similarity=0.223 Sum_probs=118.1
Q ss_pred CeEEEEeeecccCcceEEEEEE-----cCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTN-----ISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~-----~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
++|++.+.||+|+||.||+|.+ ..++..||+|+++.... .+.+.+|+.+++.+.+||||+++++++..++..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4799999999999999999974 34567899999864322 235788999999996699999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCC------------------------------------------------------------
Q psy3118 79 VMVMELL-GPSLEDLFNFCS------------------------------------------------------------ 97 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~------------------------------------------------------------ 97 (227)
++||||+ +|+|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999 999999986421
Q ss_pred --------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 98 --------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 98 --------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+..
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~ 263 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH---GRITKICDFGLARD 263 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC---CCcEEEecCcccee
Confidence 1467888889999988 9999999999999 888865 56788999998764
No 108
>KOG0586|consensus
Probab=99.93 E-value=1.3e-26 Score=191.26 Aligned_cols=184 Identities=21% Similarity=0.173 Sum_probs=143.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
.+.|.+...||+|.|+.|.+|.+..++..||||++.+..-. ..+.+|+++|+.|+ ||||++++.+......+|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN-HPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC-CcceeeeeeeeeecceeEEE
Confidence 45699999999999999999999999999999999775432 34788999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||+ +|.+++++.. .++..+.++..+..|+. ||+++|||||||+ |++|+.+ -..++.|||.+.......
T Consensus 134 ~eya~~ge~~~yl~~-~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~---mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 134 MEYASGGELFDYLVK-HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN---MNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEeccCchhHHHHHh-cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc---cceeeeccccceeecccc
Confidence 9999 9999999998 46788899999999998 9999999999999 9999874 448899999887543322
Q ss_pred hhHHHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHh
Q psy3118 155 HIESKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFN 199 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~ 199 (227)
.. +...|++.+ ++-.+.|..-+-.-...|.+|..++-|-.
T Consensus 210 ~l-----qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~ 250 (596)
T KOG0586|consen 210 ML-----QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVE 250 (596)
T ss_pred cc-----cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeee
Confidence 22 222343322 22233344333334556666666555443
No 109
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93 E-value=3.7e-26 Score=179.87 Aligned_cols=140 Identities=13% Similarity=0.182 Sum_probs=120.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEc---CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI---STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
.++|++.+.||+|+||.||+|.+. ..+..+|+|..+..... ..+.+|+.+++.++ ||||+++++++..++..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCcE
Confidence 457999999999999999999864 34568999998654322 35778999999997 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+||||+ +++|.+++......+++.+++.++.|++ +|++|++|||||| |+++.. ++..++.||+....
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~---~~~~~l~dfg~~~~ 156 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS---DLVCKISGFRRLQE 156 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC---CCcEEECCCccccc
Confidence 999999 8999999987556799999999999998 9999999999999 888865 56788899986543
No 110
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93 E-value=9.1e-26 Score=180.72 Aligned_cols=192 Identities=17% Similarity=0.159 Sum_probs=144.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... ...+.+|+.+++.++ |+||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEEEe
Confidence 579999999999999999999999999999999865432 235678999999998 9999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 84 LLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
|++++|.+++......+++..+..++.|++ +|++||+|+|||| |+++.. ++..++.|||.+.........
T Consensus 85 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~~~~~~~~~- 160 (301)
T cd07873 85 YLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE---RGELKLADFGLARAKSIPTKT- 160 (301)
T ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC---CCcEEECcCcchhccCCCCCc-
Confidence 997799998887556789999999999998 9999999999999 988876 578999999977532211000
Q ss_pred HHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCH
Q psy3118 158 SKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL 207 (227)
Q Consensus 158 ~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~ 207 (227)
.....+++.+ +.-...+........++|.+|..+++++.+ ..+|+.
T Consensus 161 ---~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg-~~~f~~ 207 (301)
T cd07873 161 ---YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG-RPLFPG 207 (301)
T ss_pred ---ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhC-CCCCCC
Confidence 0000111111 111111222222235678899999999886 345543
No 111
>KOG4717|consensus
Probab=99.93 E-value=3e-26 Score=186.22 Aligned_cols=189 Identities=21% Similarity=0.194 Sum_probs=152.2
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
+.+=|.+.+.||+|.|+.|-+|++.-+|..||||++.+..-. ..+..|++.|+.++ |||||++|++..++..+||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc-CcCeeeeeehhcccceEEE
Confidence 566799999999999999999999999999999999775432 36888999999999 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|+|+- +|+|.|++.+....+++..+..++.||+ +|+..+||||||| |+++-+. -|-+++.|||.+....|.
T Consensus 95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK--lGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK--LGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee--cCceEeeeccccccCCCc
Confidence 99999 9999999998778899999999999998 9999999999999 8887765 688999999988755553
Q ss_pred hhh----HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 154 LHI----ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 154 ~~~----e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
... .+..|.. |.+.. |-.=+-....+|.||..|+.|-.+ ..+|
T Consensus 173 ~kL~TsCGSLAYSA-------PEILL-GDsYDAPAVDiWSLGVILyMLVCG-q~PF 219 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSA-------PEILL-GDSYDAPAVDIWSLGVILYMLVCG-QPPF 219 (864)
T ss_pred chhhcccchhhccC-------chhhh-cCccCCcchhhhHHHHHHHHHHhC-CCcc
Confidence 322 2333322 22221 222222356688899888877655 3455
No 112
>KOG0194|consensus
Probab=99.93 E-value=1.3e-26 Score=190.87 Aligned_cols=200 Identities=15% Similarity=0.205 Sum_probs=152.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
++-.+.+.||+|+||.||+|..+..+. .||+|...... ....+.+|+++|+.++ |+||+++|++......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCc
Confidence 344567899999999999999765422 38999886522 2346888999999998 9999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++|||+| ||+|.+++++....++..+...++.+.+ +|++++|||||.. |+++.. ++.+++.|||+++..
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~---~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK---KGVVKISDFGLSRAG 312 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC---CCeEEeCccccccCC
Confidence 99999999 9999999999655799999999999988 9999999999999 999987 455799999997754
Q ss_pred CCchhhHHHHHHhhccCCCCCeeeeccccCC----e-eEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHHH
Q psy3118 151 HPQLHIESKIYKLMQGGVGIPQIKWCGSEGD----Y-NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLFL 219 (227)
Q Consensus 151 ~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~----~-~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~~ 219 (227)
.. |..-....- -++-|..++.. + ..-++|.+|..+||+|+.+..+|...+...+-.++..
T Consensus 313 ~~--------~~~~~~~~k-lPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 313 SQ--------YVMKKFLKK-LPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred cc--------eeecccccc-CcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 31 111010000 12344443321 1 1345688899999999987668877777666666644
No 113
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.93 E-value=2.4e-25 Score=176.96 Aligned_cols=187 Identities=17% Similarity=0.196 Sum_probs=137.4
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhc--CCCCCCeeEEcccc-----Cc
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQ--GGVGIPQIKWCGSE-----GD 76 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~--~~~~i~~~~~~~~~-----~~ 76 (227)
+|++.+.||+|+||.||+|.++.+++.||+|.++..... ....+|+.+++.+. +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 589999999999999999999999999999998654221 24567899888875 49999999988754 34
Q ss_pred EEEEEEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 77 YNVMVMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 77 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++||++.++|.+++... ...+++.++..++.|++ +|+.||+|||||| |++++. .+..+++|||.+..
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~---~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEECccCcccc
Confidence 58999999977999988764 34589999999999998 9999999999999 888865 57799999997764
Q ss_pred CCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 150 RHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 150 ~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
........ ...++..+ |... .........++|.+|..+++++.+ ..+|
T Consensus 158 ~~~~~~~~-----~~~~~~~y~aPE~~--~~~~~~~~~DiwslG~~l~~l~~g-~~~f 207 (288)
T cd07863 158 YSCQMALT-----PVVVTLWYRAPEVL--LQSTYATPVDMWSVGCIFAEMFRR-KPLF 207 (288)
T ss_pred ccCcccCC-----CccccccccCchHh--hCCCCCCcchhhhHHHHHHHHHhC-CcCc
Confidence 32211100 00111111 1111 111222346789999999998865 3344
No 114
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.93 E-value=5e-26 Score=187.49 Aligned_cols=141 Identities=15% Similarity=0.216 Sum_probs=118.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC-----CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST-----GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~-----~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|++.+.||+|+||.||+|.+..+ +..||+|.+..... ...+.+|+++++.+.+|+||+++++++..++.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 34699999999999999999986443 35799999865432 23577899999999669999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCC-----------------------------------------------------------
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS----------------------------------------------------------- 97 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~----------------------------------------------------------- 97 (227)
.++||||+ +|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999 999999986421
Q ss_pred ----------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 98 ----------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 98 ----------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
.++++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+..
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~---~~~~kL~DfGla~~ 261 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD---GRVAKICDFGLARD 261 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC---CCeEEEeeceeeee
Confidence 2478888899999988 9999999999999 888865 67789999998764
No 115
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.93 E-value=5.8e-26 Score=184.15 Aligned_cols=131 Identities=20% Similarity=0.185 Sum_probs=113.0
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhc--CCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
||+|+||.||+|.+..+++.||+|++..... ......|..++..+. +||+|+.+++.+.+++..++||||+ +
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 7999999999999999999999999865321 123445777777664 6999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+.+.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+..
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~---~~~~kl~Dfg~a~~ 145 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA---TGHIALCDFGLSKA 145 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC---CCCEEEecCCcCcC
Confidence 999999887 57799999999999998 9999999999999 998876 57899999998764
No 116
>KOG0607|consensus
Probab=99.93 E-value=1.7e-26 Score=177.83 Aligned_cols=139 Identities=17% Similarity=0.246 Sum_probs=120.8
Q ss_pred EEE-EeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 9 YRL-GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 9 y~~-~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
|++ .+.||+|+|+.|-.|....+|.++|||++.+... +.++.+|++++...++|+||++++++++++..+|+|||-+
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm 158 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKM 158 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecc
Confidence 444 4679999999999999999999999999977643 4578999999999999999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
||+|...+.+ ...|++.++..+.+.|+ +|.+||.|||+|| ||+......-.-+++.||.+..
T Consensus 159 ~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS 227 (463)
T KOG0607|consen 159 RGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS 227 (463)
T ss_pred cCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence 9999998887 57899999999999998 9999999999999 6665554333557788887654
No 117
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.93 E-value=1.6e-25 Score=183.57 Aligned_cols=189 Identities=17% Similarity=0.124 Sum_probs=138.8
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+.+|+.+++.++ ||||+++++++...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCcc
Confidence 35678999999999999999999999999999999986532 2235778999999998 99999999887643
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++||||++++|.+.+.. .+++..+..++.|++ +|++||+|||||| |+++.. ++..+++|||.+
T Consensus 97 ~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~---~~~~kl~Dfg~a 170 (359)
T cd07876 97 EFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 170 (359)
T ss_pred ccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEEecCCCc
Confidence 35799999997788777653 488899999999988 9999999999999 999876 678999999987
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
......... ....|++.+..+............++|.+|..+++++.+. .+|
T Consensus 171 ~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~-~pf 222 (359)
T cd07876 171 RTACTNFMM-----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS-VIF 222 (359)
T ss_pred cccccCccC-----CCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCC-CCC
Confidence 643221100 0011222111111111111222457888999999988763 344
No 118
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.93 E-value=8.5e-26 Score=182.11 Aligned_cols=187 Identities=12% Similarity=0.092 Sum_probs=134.0
Q ss_pred EeeecccCcceEEEEEEc--CCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccc--cCcEEEEEEeCCCC
Q psy3118 12 GRKIGSGSFGDIYLGTNI--STGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGS--EGDYNVMVMELLGP 87 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~--~~~~~~lv~e~~~~ 87 (227)
++.||+|+||.||+|.++ .+++.+|+|.+........+.+|+.++++++ ||||+++++.+. .+...+++|||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 468999999999999975 4678999999866554556788999999998 999999988774 35678999999988
Q ss_pred CHHHHHhhC--------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec-cCCCeeeEEeeeccccCCC
Q psy3118 88 SLEDLFNFC--------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN-ISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 88 ~L~~~~~~~--------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~-~~~~~~~~~~~~~~~~~~~ 152 (227)
+|.+++... ...+++..+..++.|++ +|++||+|||||| |+++..+ ..++..++.|||.+.....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 999887642 12589999999999998 9999999999999 9888543 2357899999998864321
Q ss_pred chhhHHHHHHhhccCCCCCeee-eccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIK-WCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~-~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.... ........+++.+..+. ..+........++|.+|..+++++.+
T Consensus 165 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 212 (317)
T cd07868 165 PLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred CCcc-ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhC
Confidence 1100 00001112222211111 11222222346788889998888875
No 119
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.93 E-value=6.4e-26 Score=181.85 Aligned_cols=140 Identities=16% Similarity=0.222 Sum_probs=117.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEcC----------------CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIS----------------TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIP 66 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~----------------~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~ 66 (227)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.+..... ...+.+|+.++.+++ ||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK-DPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-CCCee
Confidence 4689999999999999999998532 334799998865322 235788999999997 99999
Q ss_pred eeEEccccCcEEEEEEeCC-CCCHHHHHhhCC------------------CCcCHHHHHHHHHHhc-----ccccceecc
Q psy3118 67 QIKWCGSEGDYNVMVMELL-GPSLEDLFNFCS------------------RRFSLKTVLLLADQLS-----ITAPGIIDQ 122 (227)
Q Consensus 67 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~------------------~~~~~~~~~~i~~qi~-----lh~~~iiHr 122 (227)
++++++.+.+..+++|||+ +++|.+++.... ..+++.++..++.|++ +|+.||+||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 9999999989999999999 999999986521 2467788889999988 999999999
Q ss_pred CCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 123 EQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 123 Dlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||| |++++. .+..++.|||.++.
T Consensus 163 dlkp~Nill~~---~~~~kl~DfG~~~~ 187 (304)
T cd05096 163 DLATRNCLVGE---NLTIKIADFGMSRN 187 (304)
T ss_pred CcchhheEEcC---CccEEECCCcccee
Confidence 9999 888876 57899999998764
No 120
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.93 E-value=8.9e-26 Score=183.33 Aligned_cols=185 Identities=14% Similarity=0.083 Sum_probs=140.9
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
..++|++.+.||+|+||.||+|.+..++..+|+|.+..... ...+.+|+++++.++ |+||+++++++.+++..++|
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEEE
Confidence 35789999999999999999999999999999998865422 235788999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|||+ +++|.+++.. ...+++..+..++.|++ +|+ .+|+|||||| |++++. .+..++.|||.+......
T Consensus 82 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~---~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 82 MEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC---CCCEEEeeCCcchhhhhh
Confidence 9999 9999999987 46789999999999987 897 4799999999 888865 577999999977532111
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
. .....|+..+..+............++|.+|..+++++.+
T Consensus 158 ~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g 198 (333)
T cd06650 158 M------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198 (333)
T ss_pred c------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 0 0111222211111111111122235678889988888865
No 121
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.93 E-value=1.2e-25 Score=178.35 Aligned_cols=178 Identities=17% Similarity=0.124 Sum_probs=131.4
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||+|+||+||++.+..+++.+|+|.+..... ...+..|+++++.++ |+||+++.+++..++..++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 6999999999999999999999999865421 134677999999997 999999999999999999999999 999
Q ss_pred HHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 89 LEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 89 L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
|.+.+... ...+++.++..++.|++ +|++||+|||||| |++++. .+..+++|||.+.........
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~~~~~~~~~--- 153 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN---DGNVRISDLGLAVELKDGQSK--- 153 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEeeCccceecCCCCcc---
Confidence 98877532 35689999999999998 9999999999999 988865 677999999987532211100
Q ss_pred HHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 160 IYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 160 ~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.....|+++.-.+............++|.+|..+++++.+
T Consensus 154 -~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 193 (280)
T cd05608 154 -TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAA 193 (280)
T ss_pred -ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence 0011222221111111111112245678888888888765
No 122
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=1.3e-25 Score=186.19 Aligned_cols=187 Identities=14% Similarity=0.081 Sum_probs=140.0
Q ss_pred ecCeEEEEeeecccCcceEEEEEEc--CCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNI--STGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+..+|.+.+.||+|+||.||+|... .++..||+|.+... ....+|+++++.++ |+||+++++.+...+..+++|
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTIS-HRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcC-CCCccceeeeEeeCCEEEEEe
Confidence 4567999999999999999999754 35678999987432 34578999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|+++++|.+++.. ...+++.+++.++.|++ +|++||||||||| |+++.. .+..+++|||.+.........
T Consensus 166 e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~---~~~~~l~DfG~a~~~~~~~~~ 241 (392)
T PHA03207 166 PKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE---PENAVLGDFGAACKLDAHPDT 241 (392)
T ss_pred hhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CCCEEEccCccccccCccccc
Confidence 9998899998865 57899999999999998 9999999999999 988876 678999999987533221110
Q ss_pred HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.. .....|+..+...............++|.+|..+++++.+.
T Consensus 242 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~ 284 (392)
T PHA03207 242 PQ--CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKN 284 (392)
T ss_pred cc--ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence 00 00112333221111111112223467888999999988753
No 123
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.93 E-value=7.4e-26 Score=186.43 Aligned_cols=190 Identities=16% Similarity=0.118 Sum_probs=140.3
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCc-----EE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGD-----YN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-----~~ 78 (227)
+|++.+.||+|+||.||+|.+..+++.||+|.+..... ..++.+|+++++.++ |+||+++++++..++ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccceE
Confidence 47889999999999999999999999999998754321 235778999999998 999999999888776 78
Q ss_pred EEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 79 VMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
++||||++++|.+.+.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..++.|||.+.....
T Consensus 80 ~lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~---~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC---CCCEEeccccceeeccc
Confidence 99999998889888876 56799999999999998 9999999999999 888876 67899999998764321
Q ss_pred chhhHHHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 153 QLHIESKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.... ......+++.+ +.-...|........++|.+|..+++++.+ ..+|.
T Consensus 156 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~ 206 (372)
T cd07853 156 DESK---HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGR-RILFQ 206 (372)
T ss_pred Cccc---cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcC-CCCCC
Confidence 1100 00000111111 000111211122345789999999999875 34453
No 124
>KOG2345|consensus
Probab=99.93 E-value=7.1e-26 Score=168.58 Aligned_cols=143 Identities=15% Similarity=0.150 Sum_probs=123.6
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccC-----c
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEG-----D 76 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~-----~ 76 (227)
+-++||.+.+.||.|||+-||++....++..+|+|.+.-.. ..+...+|++..++++ |||+++++++...+ .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccCce
Confidence 34679999999999999999999999999999999875433 3456889999999998 89999998776543 3
Q ss_pred EEEEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccc--eeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 77 YNVMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPG--IIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~--iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
..|++++|. .|||.|.++.. +..+++.+++.|+.+++ +|++. +.|||||| |+++.. .+..+++||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~---~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD---SGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC---CCceEEEec
Confidence 499999999 99999998865 34789999999999999 99988 99999999 888876 789999999
Q ss_pred eccccC
Q psy3118 145 ECIKTR 150 (227)
Q Consensus 145 ~~~~~~ 150 (227)
|.+...
T Consensus 174 GS~~~a 179 (302)
T KOG2345|consen 174 GSATQA 179 (302)
T ss_pred cCcccc
Confidence 987643
No 125
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.93 E-value=3.7e-25 Score=181.79 Aligned_cols=190 Identities=16% Similarity=0.112 Sum_probs=139.4
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|++.+.||+|+||.||+|.+..+++.+|||.+..... ...+.+|+.+++.++ |+||+++++.+...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC-CCCccccceeeccccccc
Confidence 346799999999999999999999999999999999865321 235778999999998 99999998876543
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++||||++++|.+.+.. .+++..+..++.|++ +|++||+|||||| |+++.. ++..++.|||.+
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~---~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC---CCcEEEEeCCCc
Confidence 35799999998788887764 488899999999988 9999999999999 999876 578999999988
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
+........ ....++..+..+............++|.+|..+++++.+ ..+|.
T Consensus 174 ~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g-~~pf~ 226 (364)
T cd07875 174 RTAGTSFMM-----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG-GVLFP 226 (364)
T ss_pred cccCCCCcc-----cCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhC-CCCCC
Confidence 643221110 001122211111111111122245678899999999876 34554
No 126
>KOG1164|consensus
Probab=99.93 E-value=1.6e-24 Score=175.04 Aligned_cols=171 Identities=36% Similarity=0.506 Sum_probs=141.7
Q ss_pred eEEEEeeecccCcceEEEEEEcCCC-cEEEEEEeeecCCC--CchhhHHHHHHHhc---CCCCCCeeEEcc-ccCcEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTG-EEVAIKLECIKTRH--PQLHIESKIYKLMQ---GGVGIPQIKWCG-SEGDYNVM 80 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~-~~~aiK~~~~~~~~--~~~~~E~~~l~~l~---~~~~i~~~~~~~-~~~~~~~l 80 (227)
+|++.+.||+|+||.||.|.+..++ ..+|+|........ ..+..|..++..+. +.++++.+.+.+ ..+.+.|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 8999999999999999999987764 68999998775332 37899999999998 347999999999 58889999
Q ss_pred EEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC--CCeeeEEeeeccc--c
Q psy3118 81 VMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS--TGEEVAIKLECIK--T 149 (227)
Q Consensus 81 v~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~--~~~~~~~~~~~~~--~ 149 (227)
||+.+|.||.++.+.. .+.+|..++..++.|++ +|+.|+||||||| |+.++.... ....+++|||.++ .
T Consensus 99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~ 178 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFK 178 (322)
T ss_pred EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccc
Confidence 9999999999999765 47899999999999998 8999999999999 999987632 2678999999876 1
Q ss_pred ---------CC--------------------------CchhhHHHHHHhhccCCCCCeeeeccccC
Q psy3118 150 ---------RH--------------------------PQLHIESKIYKLMQGGVGIPQIKWCGSEG 180 (227)
Q Consensus 150 ---------~~--------------------------~~~~~e~~~y~~l~g~~g~p~~~~~g~~~ 180 (227)
+. +..+.++++|..++...| .+||.+.+.
T Consensus 179 ~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g--~LPW~~~~~ 242 (322)
T KOG1164|consen 179 YVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKG--SLPWEALEM 242 (322)
T ss_pred ccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcC--CCCCccccc
Confidence 11 114788888888876554 378866553
No 127
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.93 E-value=9.4e-25 Score=173.61 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=119.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.|+..+.||+|+||+||+|.+..+++.+|+|.+..... ...+.+|+++++.++ |++++.+.+.+..++..+++|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEE
Confidence 37888999999999999999999999999999865421 124677999999997 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||+ +++|.+.+... ...+++..+..++.|++ +|+.||+|||||| |++++. .+..+++|||.+..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~---~~~~kl~Dfg~~~~ 151 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD---YGHIRISDLGLAVK 151 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC---CCCEEEecCCccee
Confidence 999 99999888653 34699999999999998 9999999999999 888876 56799999997753
No 128
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.93 E-value=2.2e-25 Score=182.46 Aligned_cols=190 Identities=16% Similarity=0.118 Sum_probs=138.7
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|++.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.++ |+||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC-CCchhceeeeeecccccc
Confidence 356799999999999999999999999999999998865322 235678999999998 99999999877543
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...+++|||++++|.+.+.. .+++..+..++.|++ +|++||+|||||| |+++.. ++..++.|||.+
T Consensus 93 ~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~---~~~~kl~Dfg~~ 166 (355)
T cd07874 93 EFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 166 (355)
T ss_pred ccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC---CCCEEEeeCccc
Confidence 35799999997788777753 588899999999988 9999999999999 988876 578999999988
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
+........ ....|++....+............++|.+|..+++++.+. .+|.
T Consensus 167 ~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~-~pf~ 219 (355)
T cd07874 167 RTAGTSFMM-----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK-ILFP 219 (355)
T ss_pred ccCCCcccc-----CCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC-CCCC
Confidence 643221110 0011222111111111112222456788899999988753 3443
No 129
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.93 E-value=2.8e-25 Score=184.25 Aligned_cols=141 Identities=16% Similarity=0.191 Sum_probs=117.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC-----CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST-----GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~-----~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|.+++.||+|+||.||+|.+... +..||+|.+..... .+.+.+|+++++++..||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 35688999999999999999987432 34799999865432 24578899999999779999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCC-----------------------------------------------------------
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS----------------------------------------------------------- 97 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~----------------------------------------------------------- 97 (227)
.++||||+ +|+|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999 999999876421
Q ss_pred ------------------------------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC
Q psy3118 98 ------------------------------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS 135 (227)
Q Consensus 98 ------------------------------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~ 135 (227)
..+++.++..++.|++ +|++||+|||||| |++++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~--- 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ--- 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC---
Confidence 2477788888999988 9999999999999 888876
Q ss_pred CCeeeEEeeecccc
Q psy3118 136 TGEEVAIKLECIKT 149 (227)
Q Consensus 136 ~~~~~~~~~~~~~~ 149 (227)
.+..++.|||.+..
T Consensus 273 ~~~~kL~DfGla~~ 286 (400)
T cd05105 273 GKIVKICDFGLARD 286 (400)
T ss_pred CCEEEEEeCCccee
Confidence 56789999998763
No 130
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.93 E-value=6.4e-25 Score=172.21 Aligned_cols=138 Identities=22% Similarity=0.324 Sum_probs=122.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
++|++.+.||+|++|.||.|.+..+++.+|+|.+..... ...+.+|++++++++ ||||+++++++.+++..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEE
Confidence 469999999999999999999999999999998764321 135778999999997 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++||+ +++|.+++.. ...+++..+..++.|++ +|+.|++|||||| |++++. ++..++.|||.++.
T Consensus 81 ~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~---~~~~~l~dfg~~~~ 153 (263)
T cd06625 81 IFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS---AGNVKLGDFGASKR 153 (263)
T ss_pred EEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeeccccee
Confidence 999999 9999999887 46789999999999988 9999999999999 888865 67899999998764
No 131
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.93 E-value=7.7e-25 Score=175.57 Aligned_cols=139 Identities=17% Similarity=0.199 Sum_probs=117.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcE--EEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEE--VAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~--~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.++.++.. +|+|....... ...+.+|++++.++.+|+||+++++++...+..+++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 4799999999999999999998877764 56666543221 235778999999996699999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCee
Q psy3118 82 MELL-GPSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
|||+ +++|.+++.... ..+++.+++.++.|++ +|++|++|||||| |++++. .+..
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~---~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---NYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC---CCcE
Confidence 9999 999999987531 2578999999999998 9999999999999 888865 5778
Q ss_pred eEEeeeccc
Q psy3118 140 VAIKLECIK 148 (227)
Q Consensus 140 ~~~~~~~~~ 148 (227)
++.|||.+.
T Consensus 164 kl~dfg~~~ 172 (303)
T cd05088 164 KIADFGLSR 172 (303)
T ss_pred EeCccccCc
Confidence 999999875
No 132
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.92 E-value=2.1e-25 Score=181.85 Aligned_cols=189 Identities=16% Similarity=0.172 Sum_probs=141.1
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.+++.++ |+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC-CCchhhhhhhhccccccc
Confidence 356789999999999999999999999999999999865321 234678999999998 99999998877532
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++++|+++++|.++++. ..+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~---~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE---DCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC---CCCEEEcCCccc
Confidence 35799999999999988874 5799999999999998 9999999999999 888876 578999999987
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeee-eccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIK-WCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~-~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
........ ...|++.+..+. ..+........++|.+|..+++++.+ ..+|.
T Consensus 166 ~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~ 217 (343)
T cd07878 166 RQADDEMT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG-KALFP 217 (343)
T ss_pred eecCCCcC-------CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC-CCCCC
Confidence 64322110 011222111111 11111222346788999999998875 34443
No 133
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.92 E-value=8e-25 Score=174.04 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=119.8
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.|+..+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.++ |++++.+++.+.+++..+++|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEE
Confidence 37888999999999999999999999999998865421 124567999999998 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||+ |++|.+++... ...+++.++..++.|++ +|+.||+|||||| |++++. ++..+++|||.+..
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~---~~~~~l~Dfg~~~~ 151 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD---HGHIRISDLGLAVH 151 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC---CCCEEEeeccceee
Confidence 999 99999988653 34689999999999988 9999999999999 888876 67799999997753
No 134
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.92 E-value=1.2e-24 Score=170.00 Aligned_cols=138 Identities=20% Similarity=0.236 Sum_probs=121.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
+|++.+.||+|+||.||++.+..+++.+|+|.++... ..+.+.+|+.+++.++ |+|++++.+.+.+++..+++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEEee
Confidence 5899999999999999999999999999999886432 2245778999999998 99999999999999999999999
Q ss_pred C-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 85 L-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 85 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+ +++|.+++... ...+++..+..++.|++ +|++||+|+|||| |++++. ++...+.|||.+..
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~---~~~~~l~dfg~~~~ 149 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ---NGKVKLGDFGSARL 149 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC---CCcEEEcccCccee
Confidence 9 99999988764 45689999999999998 9999999999999 888865 67789999997754
No 135
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.92 E-value=1.6e-24 Score=172.54 Aligned_cols=191 Identities=17% Similarity=0.142 Sum_probs=141.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.++|.+.+.||+|+||.||+|.+..++..+|+|.+...... ..+.+|+.+++.++ |+||+++++++..++..+++|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEEEE
Confidence 46899999999999999999999999999999998654322 24678999999998 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
||++++|.+.+......+++.++..++.|++ +|+.||+|||||| |++++. .+..++.|||.++........
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~---~~~~~l~Dfg~~~~~~~~~~~ 159 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY---LGELKLADFGLARAKSIPSQT 159 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC---CCcEEEeccccccccCCCCCC
Confidence 9997788877765445688889999999988 9999999999999 888865 678999999977532111000
Q ss_pred HHHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 157 ESKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 157 e~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
. ....++..+ +.-...+........++|.+|..+++++.+. .+|
T Consensus 160 ~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~-~~f 204 (291)
T cd07870 160 Y----SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ-PAF 204 (291)
T ss_pred C----CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCC-CCC
Confidence 0 000011111 1111112222222346788999999999874 344
No 136
>PTZ00284 protein kinase; Provisional
Probab=99.92 E-value=5.9e-25 Score=186.13 Aligned_cols=192 Identities=14% Similarity=0.107 Sum_probs=138.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcC-----CCCCCeeEEccccC-cEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQG-----GVGIPQIKWCGSEG-DYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~-~~~ 78 (227)
.++|++.+.||+|+||.||+|.+..+++.||||+++.... ......|+.+++.+.+ +.+++.+++++... ++.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 4789999999999999999999999999999999864322 2345678888888862 34578888777654 578
Q ss_pred EEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccC-------------CCe
Q psy3118 79 VMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNIS-------------TGE 138 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~-------------~~~ 138 (227)
++|||++|++|.+++.. ...+++.++..++.|++ +|+ .||||||||| |+++..+.. ...
T Consensus 208 ~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~ 286 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCR 286 (467)
T ss_pred EEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCce
Confidence 99999999999998887 46799999999999998 997 6999999999 999876421 125
Q ss_pred eeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 139 EVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.++.|||.+....... ....|++++..+............++|.+|..+++++.+ ..+|+
T Consensus 287 vkl~DfG~~~~~~~~~-------~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG-~~pf~ 346 (467)
T PTZ00284 287 VRICDLGGCCDERHSR-------TAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTG-KLLYD 346 (467)
T ss_pred EEECCCCccccCcccc-------ccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhC-CCCCC
Confidence 8899999664321110 112233322111111111122235789999999999986 35554
No 137
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.92 E-value=5.3e-25 Score=174.33 Aligned_cols=131 Identities=18% Similarity=0.227 Sum_probs=112.9
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||+|+||.||++.+..+|+.+|+|.+.... .......|++++++++ ||||+++.+.+..+...+++|||+ |++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 699999999999999999999999886432 1223566999999997 999999999999999999999999 999
Q ss_pred HHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 89 LEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 89 L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|.+++... ...+++..+..++.|++ +|+.||+|||||| |++++. ++..+++|||.+..
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~---~~~~~l~Dfg~~~~ 144 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD---QGNCRLSDLGLAVE 144 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC---CCCEEEeeceeeee
Confidence 99888653 34688999999999988 9999999999999 888876 67789999997753
No 138
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.92 E-value=3.4e-25 Score=175.77 Aligned_cols=189 Identities=19% Similarity=0.198 Sum_probs=141.7
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|+||.||+|.+..+|+.+|+|.++.... ...+.+|+++++.++ |+|++++++++.+.+..++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999999999999999865322 235678999999998 9999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 84 LLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
|++++|.+++......+++..++.++.|++ +|++||+|||||| |++++. .+..++.|||.+.........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~- 155 (284)
T cd07839 80 YCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK---NGELKLADFGLARAFGIPVRC- 155 (284)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC---CCcEEECccchhhccCCCCCC-
Confidence 997789888876556799999999999998 9999999999999 888876 578999999977633211100
Q ss_pred HHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 158 SKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 158 ~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
+....++..+ |.. ..+........++|.+|..+++++.+....|
T Consensus 156 ---~~~~~~~~~y~aPE~-~~~~~~~~~~~DiwslG~il~~l~tg~~p~~ 201 (284)
T cd07839 156 ---YSAEVVTLWYRPPDV-LFGAKLYSTSIDMWSAGCIFAELANAGRPLF 201 (284)
T ss_pred ---cCCCccccCCcChHH-HhCCcccCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 0000011110 111 1111111223467888999999887643333
No 139
>KOG0668|consensus
Probab=99.92 E-value=4.1e-27 Score=173.71 Aligned_cols=187 Identities=18% Similarity=0.276 Sum_probs=144.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCc--EEEEEEeC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD--YNVMVMEL 84 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--~~~lv~e~ 84 (227)
++|++.+.+|+|.|++||.|....+++.++||+++. -+...+.+|+.||+.|+++|||+++.+...++. .+.+++||
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeech-HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 579999999999999999999989999999999844 455578999999999999999999999988754 58999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
+ ..+...+.. .++..+++.++.|++ ||++||+|||+|| |++++.. ..+..++|.|++.-.+|..+..
T Consensus 117 v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~--~rkLrlIDWGLAEFYHp~~eYn 190 (338)
T KOG0668|consen 117 VNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYN 190 (338)
T ss_pred hccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh--hceeeeeecchHhhcCCCceee
Confidence 9 778766655 488889999999998 9999999999999 8888775 6789999999998777754433
Q ss_pred HHHHHh-hccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 158 SKIYKL-MQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 158 ~~~y~~-l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
...-+. ..| |.+.- +-......+.||.+|+-+..+..+..+.|
T Consensus 191 VRVASRyfKG----PELLV-dy~~YDYSLD~WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 191 VRVASRYFKG----PELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFF 234 (338)
T ss_pred eeeehhhcCC----chhee-echhccccHHHHHHHHHHHHHHhccCccc
Confidence 222111 111 12111 11223335778999988888766533333
No 140
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.92 E-value=6.2e-25 Score=173.95 Aligned_cols=144 Identities=17% Similarity=0.201 Sum_probs=122.2
Q ss_pred CCceecCeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccc
Q psy3118 1 MELRVGNKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGS 73 (227)
Q Consensus 1 m~~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~ 73 (227)
|.+...++|++.+.||+|+||.||+|.+..++. +||+|....... ...+.+|+.+++.+. |+||+++++++.
T Consensus 1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~ 79 (279)
T cd05109 1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG-SPYVCRLLGICL 79 (279)
T ss_pred CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcC-CCCCceEEEEEc
Confidence 677788899999999999999999999877766 489998754322 235778999999997 999999998887
Q ss_pred cCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 74 EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 74 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
.. ..++++||+ +|+|.+++......+++.++..++.|++ +|++||+|||||| |+++.. .+..++.|||.
T Consensus 80 ~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~---~~~~kL~dfG~ 155 (279)
T cd05109 80 TS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS---PNHVKITDFGL 155 (279)
T ss_pred CC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC---CCcEEECCCCc
Confidence 54 468999999 9999999987556799999999999998 9999999999999 888865 56789999997
Q ss_pred ccc
Q psy3118 147 IKT 149 (227)
Q Consensus 147 ~~~ 149 (227)
++.
T Consensus 156 ~~~ 158 (279)
T cd05109 156 ARL 158 (279)
T ss_pred eee
Confidence 764
No 141
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.92 E-value=7.7e-25 Score=174.40 Aligned_cols=140 Identities=20% Similarity=0.265 Sum_probs=123.5
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
-++|++.+.||+|++|.||+|.++.+++.||+|.+..... ...+.+|+++++.++ |+||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEEE
Confidence 4689999999999999999999988999999999865432 234677999999997 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||++++|.+++......+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+..
T Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~ 152 (291)
T cd07844 83 EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE---RGELKLADFGLARA 152 (291)
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC---CCCEEECccccccc
Confidence 9997799998887556789999999999998 9999999999999 988876 67899999997753
No 142
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.92 E-value=2.7e-25 Score=174.78 Aligned_cols=139 Identities=17% Similarity=0.253 Sum_probs=121.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
+|+..+.||+|+||.||++.+..+++.+|+|.++.... ...+.+|+.++++++ |+|++++++.+.+++..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 48889999999999999999999999999999865331 235788999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++||+ +++|.++++. ...+++..+..++.|++ +|++|++|+|||| |++++.+ ....+++||+.+...
T Consensus 80 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~--~~~~~l~dfg~~~~~ 154 (268)
T cd06630 80 LFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST--GQRLRIADFGAAARL 154 (268)
T ss_pred EEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEccccccccc
Confidence 999999 9999999987 46789999999999998 9999999999999 9998653 346889999977543
No 143
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.92 E-value=4e-25 Score=180.21 Aligned_cols=141 Identities=15% Similarity=0.243 Sum_probs=116.2
Q ss_pred cCeEEEEeeecccCcceEEEEEE-----cCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEcccc-Cc
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTN-----ISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSE-GD 76 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~-----~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~ 76 (227)
.++|++.+.||+|+||.||+|.+ ..+++.||||.++.+... ..+.+|+.++.++.+|+||+++++++.. +.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 46899999999999999999985 346789999998654322 3577899999999879999999987654 45
Q ss_pred EEEEEEeCC-CCCHHHHHhhCC----------------------------------------------------------
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCS---------------------------------------------------------- 97 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~---------------------------------------------------------- 97 (227)
..+++|||+ +++|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 689999999 999999987521
Q ss_pred --------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 98 --------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 98 --------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~---~~~~kl~dfg~~~~ 228 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---NNVVKICDFGLARD 228 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC---CCcEEEEecccccc
Confidence 2367778888888887 9999999999999 888875 57899999997754
No 144
>KOG0608|consensus
Probab=99.92 E-value=8.2e-26 Score=187.44 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=122.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
..-|..++.||-|+||+|.++...+|...+|+|.+++.. ....++.|-.||.... .+=||+||..|++.+.+|+
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEE
Confidence 346889999999999999999988899999999886642 2335677999999998 7899999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
||+|+ ||++..+|-. -+.|.+..++.++.++. .|..|+||||||| ||+++. +|.+++.|||+.+
T Consensus 707 VMdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr---dGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR---DGHIKLTDFGLCT 777 (1034)
T ss_pred EEeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc---CCceeeeeccccc
Confidence 99999 9999999987 47899999988887766 8999999999999 999988 7999999999653
No 145
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.92 E-value=1.3e-24 Score=175.16 Aligned_cols=138 Identities=18% Similarity=0.246 Sum_probs=122.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|........ ..+..|+++++.++ |+||+++++.+..++..+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEE
Confidence 4799999999999999999999999999999998654322 35778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ |++|.+++... ...+++..+..++.|++ +|+.|++|+|||| |++++. ++..++.|||.+.
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~ 151 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE---SGHIMLSDFDLSK 151 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC---CCCEEEeecchhh
Confidence 9999 99999998764 45799999999999988 9999999999999 888876 5788999999765
No 146
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.92 E-value=5.6e-25 Score=173.04 Aligned_cols=142 Identities=19% Similarity=0.291 Sum_probs=124.1
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
..-.++|++.+.||+|+||.||+|.+..+++.+|+|+...... ...+.+|+.++++++ |+||+++++.+...+..++
T Consensus 5 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 5 RNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred cCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEE
Confidence 3446689999999999999999999999999999999864422 234678999999998 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||||+ +++|.+++.. ...+++.++..++.|++ +|+.||+|||||| |++++. .+..++.|||.+..
T Consensus 84 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~---~~~~~l~dfg~~~~ 155 (267)
T cd06646 84 CMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD---NGDVKLADFGVAAK 155 (267)
T ss_pred EEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC---CCCEEECcCcccee
Confidence 99999 8999999876 46789999999999998 9999999999999 888865 56799999997753
No 147
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.92 E-value=2.8e-24 Score=168.94 Aligned_cols=188 Identities=19% Similarity=0.204 Sum_probs=136.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-------CCchhhHHHHHHHhcCCCCCCeeEEccccC--cE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-------HPQLHIESKIYKLMQGGVGIPQIKWCGSEG--DY 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~ 77 (227)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.+++++. |+||+++++++.++ ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCce
Confidence 579999999999999999999999999999998754321 124677999999997 99999999987763 56
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.+++|||+ +++|.+++.. ...+++..+..++.|++ +|+.|++|+|||| |+++.. .+..++.|||.+...
T Consensus 81 ~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS---VGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC---CCCEEECcCcccccc
Confidence 88999999 9999999886 35689999999999988 9999999999999 988865 678999999977633
Q ss_pred CCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 151 HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 151 ~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
........ .+....++..+..+............++|.+|..+++++.+
T Consensus 157 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g 205 (265)
T cd06652 157 QTICLSGT-GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTE 205 (265)
T ss_pred cccccccc-ccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhC
Confidence 21100000 01111122211111111111222335667888888888865
No 148
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.92 E-value=8.4e-25 Score=176.19 Aligned_cols=187 Identities=12% Similarity=0.097 Sum_probs=132.6
Q ss_pred EeeecccCcceEEEEEEcC--CCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccc--cCcEEEEEEeCCCC
Q psy3118 12 GRKIGSGSFGDIYLGTNIS--TGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGS--EGDYNVMVMELLGP 87 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~--~~~~~~lv~e~~~~ 87 (227)
+..||+|+||.||+|.+.. ++..+|+|.+........+.+|+++++.++ ||||+++++++. .+...+++|||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 4689999999999999654 567899999866555556888999999998 999999998774 45678999999988
Q ss_pred CHHHHHhhC--------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec-cCCCeeeEEeeeccccCCC
Q psy3118 88 SLEDLFNFC--------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN-ISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 88 ~L~~~~~~~--------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~-~~~~~~~~~~~~~~~~~~~ 152 (227)
+|.+++... ...+++..+..++.|++ +|+.||+|||||| |+++..+ ..++..++.|||.++....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 998887532 12588899999999998 9999999999999 9888543 2357899999998864322
Q ss_pred chhhHHHHHHhhccCCCCCeee-eccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIK-WCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~-~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
...... ......++++...+. +.+........++|.+|..+++++.+
T Consensus 165 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg 212 (317)
T cd07867 165 PLKPLA-DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred Cccccc-ccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhC
Confidence 111000 001111222111111 11211122335678889998888875
No 149
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.92 E-value=1.4e-24 Score=169.85 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=119.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
++|++.+.||+|+||.||++... ++..+|+|....... ...+.+|+.++++++ ||||+++++++..++..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEEEEcC
Confidence 46899999999999999999864 456899998754332 246788999999998 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++......+++..+..++.|++ +|++||+|||||| |+++.. .+..++.|||.+..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~kl~d~g~~~~ 149 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS---TGVVKVSDFGMTRY 149 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC---CCeEEECCCCCccc
Confidence 9999999886445689999999999988 9999999999999 888865 57789999997764
No 150
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.92 E-value=2.3e-24 Score=169.50 Aligned_cols=187 Identities=17% Similarity=0.142 Sum_probs=138.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.++ |||++++++++.+++..+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEEE
Confidence 579999999999999999999999999999998754221 124678999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 82 MELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
+||+ +++|.+++... ...+++.++..++.|++ +|++|++|+|||| |++++. ++...+.|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~---~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC---CCCEEECccccceecc
Confidence 9999 89999988642 34588999999999988 9999999999999 888866 5778999999776432
Q ss_pred CchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 152 PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.... ......+......+............++|.+|..+++++.+.
T Consensus 158 ~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 203 (267)
T cd08228 158 SKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred chhH----HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCC
Confidence 2111 001111221110111111111122345777888888887654
No 151
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.92 E-value=3.3e-25 Score=181.35 Aligned_cols=181 Identities=16% Similarity=0.159 Sum_probs=133.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|+..+.||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.++ |+||+++++++...+..++|||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEEEEEe
Confidence 468889999999999999999999999999999865432 235788999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|+ +++|.+. ...++..+..++.|++ +|++||+|||||| |++++. .+..+++|||.+.........
T Consensus 153 ~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 153 FMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS---AKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred cCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---CCCEEEcccccceeccccccc
Confidence 99 8887542 3456777888888888 9999999999999 988876 578999999987643221110
Q ss_pred HHHHHHhhccCCCC--Ceeeeccc-cCCe--eEEEeeccCCCHHHHHhH
Q psy3118 157 ESKIYKLMQGGVGI--PQIKWCGS-EGDY--NVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 157 e~~~y~~l~g~~g~--p~~~~~g~-~~~~--~~~vm~~lg~~l~~l~~~ 200 (227)
.....|+..+ |....... .+.+ ...++|.+|..+++++.+
T Consensus 225 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g 269 (353)
T PLN00034 225 ----CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLG 269 (353)
T ss_pred ----ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhC
Confidence 0011222221 11111000 0111 135678889988888765
No 152
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.92 E-value=5.1e-24 Score=166.37 Aligned_cols=185 Identities=16% Similarity=0.116 Sum_probs=139.4
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|.+.+.||+|++|.||+|.+..+++.+|+|.+.... ....+.+|+++++.++ |+|++++++++.+++..+++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEEE
Confidence 4889999999999999999999999999999886432 2245778999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+ +++|.+++... ...+++..+..++.|++ +|++|++|+|||| |++++. .+..++.||+.+........
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~---~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA---YDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC---CCCEEEcccccceeccCccc
Confidence 99 99999999874 46789999999999988 9999999999999 888876 57889999997764332211
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.. ....+.+.+..+............++|.+|..+++++.+
T Consensus 157 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 197 (256)
T cd08529 157 FA----NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG 197 (256)
T ss_pred hh----hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhC
Confidence 11 111122211111111111112235667788888888765
No 153
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.92 E-value=3.3e-24 Score=170.89 Aligned_cols=141 Identities=16% Similarity=0.228 Sum_probs=119.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC-----CcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST-----GEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~-----~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|++.+.||+|+||.||++.+... ...+|+|........ ..+.+|+++++++.+|+||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 46899999999999999999987643 368999988653221 3477899999999669999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhC---------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFC---------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS 135 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~ 135 (227)
.+++|||+ +++|.++++.. ...+++..++.++.|++ +|++||+|||||| |+++..
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~--- 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE--- 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC---
Confidence 99999999 99999998642 34689999999999998 9999999999999 888865
Q ss_pred CCeeeEEeeecccc
Q psy3118 136 TGEEVAIKLECIKT 149 (227)
Q Consensus 136 ~~~~~~~~~~~~~~ 149 (227)
++..++.|||.+..
T Consensus 168 ~~~~kL~Dfg~~~~ 181 (293)
T cd05053 168 DHVMKIADFGLARD 181 (293)
T ss_pred CCeEEeCccccccc
Confidence 67899999997764
No 154
>KOG0193|consensus
Probab=99.92 E-value=1.2e-24 Score=179.58 Aligned_cols=134 Identities=22% Similarity=0.300 Sum_probs=118.6
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+...+...||+|.||+||+|.+- -.||||++.... ..+.|++|+.++++-+ |.||+-+.+++..+.. .+|+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred HHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-eeee
Confidence 34578899999999999999983 369999987653 2346899999999999 9999999999999988 9999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
.+| |.+|..+++....+|...+.+.|++|++ ||.++|||||||. ||++.+ .+++++.|||++.
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~---~~kVkIgDFGLat 536 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE---DLKVKIGDFGLAT 536 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc---CCcEEEeccccee
Confidence 999 9999999988777899999999999999 9999999999999 777765 5889999999875
No 155
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.92 E-value=3.6e-24 Score=169.92 Aligned_cols=189 Identities=20% Similarity=0.223 Sum_probs=145.2
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||.|+||.||+|.+..+|..+|+|....... ...+.+|+.+++.++ |+|++++++++..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999998999999999865432 235788999999998 9999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 84 LLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
|++++|.+++......+++.++..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+........
T Consensus 80 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~---~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 80 YMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC---CCcEEEeeeeecccccCCCC--
Confidence 999999999876567799999999999998 9999999999999 988876 67799999997764322111
Q ss_pred HHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 158 SKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 158 ~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
..+....++... |... .+........++|.+|..+++++.+ ...|
T Consensus 155 -~~~~~~~~~~~y~aPE~~-~~~~~~~~~~Di~slG~~l~~l~tg-~~~~ 201 (286)
T cd07832 155 -RLYSHQVATRWYRAPELL-YGARKYDPGVDLWAVGCIFAELLNG-SPLF 201 (286)
T ss_pred -CccccccCcccccCceee-eccccCCchhHHHHHHHHHHHHHcC-CcCc
Confidence 001111122211 2211 1222222346678889999998886 3344
No 156
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.92 E-value=4.9e-24 Score=166.63 Aligned_cols=138 Identities=21% Similarity=0.167 Sum_probs=121.8
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||.|+||.||.+.+..+++.+++|.+.... ....+.+|++++++++ |+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEEE
Confidence 6999999999999999999999999999999876532 1235778999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++.++..++.|++ +|+.|++|+|||| |+++.. .+..++.||+.+..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~---~~~~kl~d~~~~~~ 150 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK---AGLIKLGDFGISKI 150 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC---CCCEEECcCcceEE
Confidence 99 99999999874 45789999999999988 8999999999999 888876 56789999997753
No 157
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.92 E-value=3.3e-24 Score=188.11 Aligned_cols=139 Identities=19% Similarity=0.313 Sum_probs=123.6
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|.+.+.||+|+||.||+|.+..+++.||||+++.... ...+..|+.+++.++ |+||+++++.+...+..++|
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEEE
Confidence 679999999999999999999999999999999865432 135778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|||+ |++|.+++.. ...+++..++.++.|++ +|.+||||||||| |+++.. .+..+++|||.++..
T Consensus 83 mEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~---~g~vkL~DFGls~~~ 154 (669)
T cd05610 83 MEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN---EGHIKLTDFGLSKVT 154 (669)
T ss_pred EeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC---CCCEEEEeCCCCccc
Confidence 9999 9999999987 46789999999999998 9999999999999 988865 678999999988743
No 158
>KOG0577|consensus
Probab=99.92 E-value=1.1e-25 Score=185.35 Aligned_cols=186 Identities=19% Similarity=0.267 Sum_probs=152.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.|.-++.||.|+||.||.|++..+.+.||||.+.-..+ ...+..|+..|+.|. |||++.+.+||......|+||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHHHH
Confidence 46667889999999999999999999999998764322 235788999999999 999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|||-||-.|++.-...++.+.++..|+.+.+ +|+.+-||||||. ||++.. .|.+++.|||.+....|...
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse---~g~VKLaDFGSAsi~~PAns- 181 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSE---PGLVKLADFGSASIMAPANS- 181 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecC---CCeeeeccccchhhcCchhc-
Confidence 9998888899887778899999999999888 9999999999999 999977 79999999999886665321
Q ss_pred HHHHHHhhccCCCCCeeeecccc-------CCee-EEEeeccCCCHHHHHhHcCCCCCHHHH
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSE-------GDYN-VMVMELLGPSLEDLFNFCSRRFSLKTV 210 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~-------~~~~-~~vm~~lg~~l~~l~~~~~~~f~~~~~ 210 (227)
..||| +|..++ +.|. -.++|.||.+=-+|-.+.|+-|....+
T Consensus 182 -------FvGTP-----ywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM 231 (948)
T KOG0577|consen 182 -------FVGTP-----YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 231 (948)
T ss_pred -------ccCCc-----cccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH
Confidence 23444 333322 2232 456899999888888887888876543
No 159
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.92 E-value=3.1e-24 Score=190.35 Aligned_cols=191 Identities=17% Similarity=0.109 Sum_probs=139.1
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEcccc--CcE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSE--GDY 77 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~~~ 77 (227)
...++|++.+.||+|+||.||+|.+..++..+|+|.+..... ...+..|+.+++.|+ ||||+++++++.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCCE
Confidence 345689999999999999999999999999999999865422 235788999999998 9999999987743 567
Q ss_pred EEEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----cccc-------ceeccCCee-eEEEeecc------
Q psy3118 78 NVMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAP-------GIIDQEQKS-VMVVGTNI------ 134 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~-------~iiHrDlkp-ni~l~~~~------ 134 (227)
+|+||||+ +++|.+++... ...+++..++.|+.||+ +|+. +|||||||| ||++..+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999 99999998753 35799999999999998 8984 599999999 99986531
Q ss_pred --------CCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeee-eccc-cCCeeEEEeeccCCCHHHHHhH
Q psy3118 135 --------STGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIK-WCGS-EGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 135 --------~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~-~~g~-~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
..+.++++|||.+........ .....|++.+..+. ..+. .......++|.||..+++++.+
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-----~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM-----AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc-----ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence 123478999998764321110 01112333221111 1111 1112235678888888888875
No 160
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92 E-value=1.7e-24 Score=169.42 Aligned_cols=138 Identities=18% Similarity=0.260 Sum_probs=122.7
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+|++.+.||.|+||.||+|.+..++..+|+|.+..... ...+.+|++++++++ ||||+++++.+.+++..++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 58999999999999999999998999999999865421 236788999999997 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
||+ |++|.+.+.. ...+++.++..++.|++ +|++|++|+|||| |++++. .+..+++||+.+...
T Consensus 80 e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~---~~~~~l~d~~~~~~~ 150 (258)
T cd05578 80 DLLLGGDLRYHLSQ-KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE---QGHVHITDFNIATKV 150 (258)
T ss_pred eCCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC---CCCEEEeeccccccc
Confidence 999 9999999987 36899999999999998 8999999999999 988876 577899999977643
No 161
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.92 E-value=1.4e-24 Score=170.59 Aligned_cols=139 Identities=17% Similarity=0.234 Sum_probs=121.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.+|.+.+.||+|+||.||+|.+..+++.+|+|....+.. ...+.+|+++++.++ |+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEEEEeC
Confidence 469999999999999999999999999999998764322 235788999999998 999999999999999999999999
Q ss_pred -CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++... ...+++..++.++.|++ +|++|++|||||| |+++.. .+..++.||+.+..
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~---~~~~kl~df~~~~~ 153 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE---NHLVKVADFGLSRL 153 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC---CCcEEeCCCccccc
Confidence 99999998764 34689999999999988 9999999999999 888865 67899999997754
No 162
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.92 E-value=1.6e-25 Score=175.20 Aligned_cols=135 Identities=29% Similarity=0.415 Sum_probs=120.6
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----chhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
|++++.||+|+||.||++.+..+++.+|+|......... ...+|+.++++++ |+||+++++++...+..+++||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc-ccccccccccccccccccccccc
Confidence 889999999999999999999999999999987654322 2345999999996 99999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+ +++|.+++.. ...+++.++..++.|++ +|+.|++|+|||| |++++. .+..+++|||.+.
T Consensus 80 ~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~---~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 80 CPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDE---NGEVKLIDFGSSV 146 (260)
T ss_dssp ETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST---TSEEEESSGTTTE
T ss_pred cccccccccccc-cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccc
Confidence 9 7799999985 47899999999999998 9999999999999 998885 7889999999875
No 163
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.92 E-value=2.3e-24 Score=172.32 Aligned_cols=138 Identities=22% Similarity=0.279 Sum_probs=122.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..+|++.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.+. |+|++++++.+..+...++|||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEEEeec
Confidence 4689999999999999999999999999999998865432 346778999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++.. ..+++.++..++.|++ +|+.||+|||||| |++++. ++..++.|||.+..
T Consensus 98 ~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~---~~~~kl~dfg~~~~ 165 (296)
T cd06654 98 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQ 165 (296)
T ss_pred ccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC---CCCEEECccccchh
Confidence 99 9999999875 5689999999999988 9999999999999 999866 56789999997654
No 164
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.92 E-value=3.3e-24 Score=172.30 Aligned_cols=181 Identities=16% Similarity=0.112 Sum_probs=139.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|+||.||++.+..++..+|+|....... ...+.+|++++++++ ||||+++++++.+++..+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEee
Confidence 469999999999999999999999999999998864322 235778999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+ +++|.++++. ...+++..+..++.|++ +|+ .+++|||||| |++++. ++..++.|||.+........
T Consensus 80 y~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~~~ 155 (308)
T cd06615 80 HMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDSMA 155 (308)
T ss_pred ccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec---CCcEEEccCCCccccccccc
Confidence 99 9999999987 46799999999999998 897 6999999999 888876 57789999997653321100
Q ss_pred hHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 156 IESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
....++... |.. ..+. ......++|.+|..+++++.+
T Consensus 156 ------~~~~~~~~~~aPE~-~~~~-~~~~~~DiwslG~~l~~l~~g 194 (308)
T cd06615 156 ------NSFVGTRSYMSPER-LQGT-HYTVQSDIWSLGLSLVEMAIG 194 (308)
T ss_pred ------ccCCCCcCccChhH-hcCC-CCCccchHHHHHHHHHHHHhC
Confidence 011122111 111 1111 112235678888888888875
No 165
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.92 E-value=1.5e-24 Score=174.94 Aligned_cols=141 Identities=17% Similarity=0.183 Sum_probs=119.1
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
-..+|++.+.||+|+||.||+|.+..++. .||+|....... ...+.+|+.+++.++ |+||+++++++..+ .
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~ 82 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD-NPHVCRLLGICLTS-T 82 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-C
Confidence 35689999999999999999999866665 489998754322 235778999999997 99999999988765 4
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.++++||+ +|+|.+++......+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.++..
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~---~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT---PQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC---CCcEEEccccccccc
Confidence 57999999 9999999987556789999999999998 9999999999999 888866 567899999988643
No 166
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.92 E-value=1.1e-24 Score=177.08 Aligned_cols=195 Identities=17% Similarity=0.167 Sum_probs=142.0
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccc----cC
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGS----EG 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~----~~ 75 (227)
.++++|++.+.||+|+||.||+|.+..++..||+|.+..... ...+.+|+.++++++ |+||+++++++. ..
T Consensus 2 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 80 (334)
T cd07855 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADF 80 (334)
T ss_pred chhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCC
Confidence 356899999999999999999999999999999999865422 235678999999998 999999987765 34
Q ss_pred cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 76 DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 76 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
...++||||++++|.+++.. ...+++.++..++.|++ +|++||+|||||| |++++. ++..++.|||.+..
T Consensus 81 ~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~---~~~~kl~dfg~~~~ 156 (334)
T cd07855 81 KDVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE---DCELRIGDFGMARG 156 (334)
T ss_pred ceEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCcEEeccccccee
Confidence 57899999997799998876 46699999999999998 9999999999999 998876 67899999998764
Q ss_pred CCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 150 RHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 150 ~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
................++... |.... +........++|.+|..+++++.+. .+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~-~~~~~~~~~Di~slG~~l~el~~g~-~pf 212 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLL-SLPEYTTAIDMWSVGCIFAEMLGRR-QLF 212 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhc-CCcccccccchHHHHHHHHHHHcCC-Ccc
Confidence 322111000000001111111 11111 1111223456788899999988653 344
No 167
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.92 E-value=1.3e-24 Score=180.16 Aligned_cols=140 Identities=17% Similarity=0.209 Sum_probs=116.8
Q ss_pred CeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
++|.+.+.||+|+||.||+|.+. .+++.||+|++...... ..+.+|+.++.++..||||+++++++..++..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 46888999999999999999863 34568999998654322 35778999999997799999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCC------------------------------------------------------------
Q psy3118 79 VMVMELL-GPSLEDLFNFCS------------------------------------------------------------ 97 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~------------------------------------------------------------ 97 (227)
++||||+ +|+|.+++....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 9999999 999999986531
Q ss_pred -------------------------------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeecc
Q psy3118 98 -------------------------------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNI 134 (227)
Q Consensus 98 -------------------------------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~ 134 (227)
..+++..+..++.|++ +|++|++|||||| |+++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~-- 274 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE-- 274 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC--
Confidence 1356677788888887 9999999999999 888865
Q ss_pred CCCeeeEEeeecccc
Q psy3118 135 STGEEVAIKLECIKT 149 (227)
Q Consensus 135 ~~~~~~~~~~~~~~~ 149 (227)
.+..++.|||.++.
T Consensus 275 -~~~~kL~DfGla~~ 288 (401)
T cd05107 275 -GKLVKICDFGLARD 288 (401)
T ss_pred -CCEEEEEecCccee
Confidence 56789999998763
No 168
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.92 E-value=1.5e-24 Score=170.72 Aligned_cols=140 Identities=15% Similarity=0.224 Sum_probs=120.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCc---EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGE---EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~---~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
.++|++.+.||+|+||.||+|.+..++. .+|+|.+..... ...+.+|+.+++.++ ||||+++++++.+++..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCccE
Confidence 3579999999999999999999865543 799998754322 235788999999997 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|||+ +++|.+++......+++.++..++.|++ +|++|++|||||| |++++. .+..++.|||.+..
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~---~~~~~l~dfg~~~~ 155 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS---NLVCKVSDFGLSRV 155 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC---CCeEEeCCCCcccc
Confidence 999999 9999999987556789999999999988 8999999999999 888865 57789999997764
No 169
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.92 E-value=1.7e-24 Score=173.14 Aligned_cols=138 Identities=24% Similarity=0.282 Sum_probs=122.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..+|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.+++.++ |+|++++++++..++..++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEEEEeec
Confidence 4689999999999999999999999999999998865432 245778999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++.. ..+++.++..++.|++ +|+.|++|||||| |++++. ++..++.|||.+..
T Consensus 97 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~---~~~~~l~Dfg~~~~ 164 (297)
T cd06656 97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQ 164 (297)
T ss_pred ccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEECcCccceE
Confidence 99 9999999875 5689999999999988 9999999999999 888865 67899999997654
No 170
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.91 E-value=1.6e-24 Score=172.04 Aligned_cols=137 Identities=22% Similarity=0.247 Sum_probs=116.8
Q ss_pred EEEEeeecccCcceEEEEEE----cCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccC--cEEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTN----ISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEG--DYNV 79 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~----~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~~ 79 (227)
|++.+.||+|+||.||+|.. ..++..+|+|.+..... ...+.+|+.+++.++ |+|++++.+++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCCceE
Confidence 68999999999999999974 45778999999864322 235788999999998 99999999887764 5689
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|||+ |++|.+++......+++.++..++.|++ +|++|++|||||| |+++.. .+..++.|||.+..
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~---~~~~~l~dfg~~~~ 158 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC---CCCEEECCCccccc
Confidence 999999 9999999976445689999999999998 9999999999999 888865 57789999998764
No 171
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.91 E-value=3.3e-24 Score=168.65 Aligned_cols=141 Identities=13% Similarity=0.180 Sum_probs=121.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC---CcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST---GEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
.++|++.+.||+|+||.||+|.+..+ ...+|+|..+..... ..+.+|+.+++.++ |+||+++++.+...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCceE
Confidence 35799999999999999999998644 457999987654322 35778999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
++|||+ +++|.+++......+++.++..++.|++ +|++||+|+|||| |++++. .+..++.|||.+...
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~---~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC---CCCEEECccchhhcc
Confidence 999999 9999999987556799999999999998 9999999999999 888865 577899999977643
No 172
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.91 E-value=2.8e-24 Score=170.21 Aligned_cols=145 Identities=17% Similarity=0.186 Sum_probs=123.0
Q ss_pred CCceecCeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccc
Q psy3118 1 MELRVGNKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGS 73 (227)
Q Consensus 1 m~~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~ 73 (227)
|.+...++|++.+.||+|+||.||+|.+..+++ .+|+|........ ..+.+|+.++++++ |+|++++++++.
T Consensus 1 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 79 (279)
T cd05057 1 LRILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD-HPHVVRLLGICL 79 (279)
T ss_pred CcccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEe
Confidence 345567889999999999999999999876665 5899987554322 35778999999997 999999999888
Q ss_pred cCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 74 EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 74 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
. ...+++|||+ +++|.+++......+++..+..++.|++ +|++|++|||||| |+++.. .+..++.|||.
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~---~~~~kL~dfg~ 155 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT---PQHVKITDFGL 155 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC---CCeEEECCCcc
Confidence 7 6789999999 9999999987656799999999999998 9999999999999 888865 57789999997
Q ss_pred cccC
Q psy3118 147 IKTR 150 (227)
Q Consensus 147 ~~~~ 150 (227)
+...
T Consensus 156 ~~~~ 159 (279)
T cd05057 156 AKLL 159 (279)
T ss_pred cccc
Confidence 7643
No 173
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91 E-value=6.5e-24 Score=170.60 Aligned_cols=192 Identities=19% Similarity=0.169 Sum_probs=142.5
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccC--cE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEG--DY 77 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~ 77 (227)
...++|++.+.||+|+||.||+|.+..+|+.||+|.+...... ....+|+.++++++ |+|++++++++... +.
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDS 82 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCe
Confidence 3457899999999999999999999999999999998654322 23567999999998 99999999887654 56
Q ss_pred EEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 78 NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
.++||||++++|.+++......+++.++..++.|++ +|+.|++|||||| |+++.. .+..++.|||.+....
T Consensus 83 ~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 83 IFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD---KGCLKIADFGLARTYG 159 (309)
T ss_pred EEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEECccceeeecC
Confidence 899999997799999887556799999999999998 9999999999999 988876 6789999999776432
Q ss_pred CchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 152 PQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
...... ....++... |... .+........++|.+|..+++++.+. .+|
T Consensus 160 ~~~~~~----~~~~~~~~y~aPE~~-~~~~~~~~~~DvwslG~il~el~~g~-~~f 209 (309)
T cd07845 160 LPAKPM----TPKVVTLWYRAPELL-LGCTTYTTAIDMWAVGCILAELLAHK-PLL 209 (309)
T ss_pred CccCCC----CcccccccccChhhh-cCCCCcCchHHHHHHHHHHHHHHhCC-CCC
Confidence 211000 000000100 1111 12122223456788899999998863 444
No 174
>KOG1152|consensus
Probab=99.91 E-value=2.4e-24 Score=176.95 Aligned_cols=138 Identities=20% Similarity=0.304 Sum_probs=123.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----------CCCchhhHHHHHHHhc--CCCCCCeeEEcccc
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----------RHPQLHIESKIYKLMQ--GGVGIPQIKWCGSE 74 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----------~~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~ 74 (227)
.+|...+.+|.|+||.|++|.++.+...|+||.+.+.. +-..+..|+.||..|+ .|+||+++.+++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35999999999999999999999999999999986642 1224677999999997 48999999999999
Q ss_pred CcEEEEEEeCC--CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 75 GDYNVMVMELL--GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 75 ~~~~~lv~e~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
++++|++||.- |-+|+|++.. ...+++.++..|.+|+. +|++||||||||- |++++. .|-.+++|||.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~---~g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDS---NGFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhc-cCccchHHHHHHHHHHHhccccccccCceecccccccEEEec---CCeEEEeeccc
Confidence 99999999988 6699999988 68899999999999998 9999999999999 888877 78899999997
Q ss_pred cc
Q psy3118 147 IK 148 (227)
Q Consensus 147 ~~ 148 (227)
+.
T Consensus 717 aa 718 (772)
T KOG1152|consen 717 AA 718 (772)
T ss_pred hh
Confidence 75
No 175
>KOG4279|consensus
Probab=99.91 E-value=4.1e-25 Score=185.02 Aligned_cols=184 Identities=18% Similarity=0.172 Sum_probs=150.7
Q ss_pred eecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHH
Q psy3118 14 KIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLE 90 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 90 (227)
+||+|+||+||.|+|+.+....|||-++... ..+.+..|+.+.+.|+ |.|||+..+.+.+++++-+.||-+ ||||.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 6999999999999999999999999886543 3356888999999999 999999999999999999999999 99999
Q ss_pred HHHhhCCCCc--CHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHH
Q psy3118 91 DLFNFCSRRF--SLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYK 162 (227)
Q Consensus 91 ~~~~~~~~~~--~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~ 162 (227)
++++..=+++ ++.++-.+.+||+ +|++.|||||||- |+++..- +|..++.|||.++....-...--.+..
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy--SGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY--SGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec--cceEEecccccchhhccCCcccccccc
Confidence 9999864566 8999999999999 9999999999999 8888776 799999999988754322111111222
Q ss_pred hhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcC
Q psy3118 163 LMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCS 202 (227)
Q Consensus 163 ~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~ 202 (227)
.++-.. |.+.+.|+.+....-++|.+|++.-|+-.+.+
T Consensus 739 TLQYMA--PEvIDqG~RGYG~aADIWS~GCT~vEMATGrP 776 (1226)
T KOG4279|consen 739 TLQYMA--PEVIDQGPRGYGKAADIWSFGCTMVEMATGRP 776 (1226)
T ss_pred chhhhC--hHhhccCCcCCCchhhhhhccceeEeeccCCC
Confidence 222111 67788888888888889999999888777643
No 176
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.91 E-value=4.6e-24 Score=171.21 Aligned_cols=137 Identities=16% Similarity=0.215 Sum_probs=121.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||++.+..+++.||+|.+..... ...+.+|+++++.++ |+||+++++.+..++..+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEE
Confidence 469999999999999999999999999999998865421 235678999999997 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ |++|.++++. ...+++..+..++.|++ +|+.|++|||||| |++++. .+..++.|||.++
T Consensus 80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~---~~~~~l~dfg~~~ 149 (305)
T cd05609 80 MEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS---MGHIKLTDFGLSK 149 (305)
T ss_pred EecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC---CCCEEEeeCCCcc
Confidence 9999 9999999987 46789999999999888 9999999999999 988865 6789999999765
No 177
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.91 E-value=7.3e-25 Score=172.39 Aligned_cols=139 Identities=21% Similarity=0.312 Sum_probs=122.6
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC--CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH--PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|.++..... ..+.+|+.+++.++ ||||+++++.+...+..+++||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEe
Confidence 35789999999999999999999999999999998654322 34678999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++.. .+.+++.++..++.|++ +|+.|++|+|||| |+++.. .+..++.|||.+..
T Consensus 87 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~---~~~~~l~dfg~~~~ 155 (267)
T cd06645 87 FCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD---NGHVKLADFGVSAQ 155 (267)
T ss_pred ccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEECcceeeeE
Confidence 99 8999999877 46799999999999998 9999999999999 888865 67789999997653
No 178
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91 E-value=7.9e-24 Score=166.34 Aligned_cols=192 Identities=17% Similarity=0.189 Sum_probs=138.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-------CCchhhHHHHHHHhcCCCCCCeeEEccccC--cE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-------HPQLHIESKIYKLMQGGVGIPQIKWCGSEG--DY 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~ 77 (227)
.+|.+.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|++++++++ |+||+++++++.+. +.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence 579999999999999999999999999999998754211 125778999999998 99999999887653 56
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.++++||+ +++|.+++.. ...+++..+..++.|++ +|+.|++|+|||| |++++. ++..++.|||.+...
T Consensus 81 ~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~~ 156 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS---AGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEECcccccccc
Confidence 88999999 9999999886 45689999999999988 9999999999999 888865 567899999977643
Q ss_pred CCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 151 HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 151 ~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
........ ......++.....+............++|.+|..+++++.+. .+|
T Consensus 157 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~-~p~ 209 (264)
T cd06653 157 QTICMSGT-GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEK-PPW 209 (264)
T ss_pred ccccccCc-cccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCC-CCC
Confidence 21100000 001111222111111111112223356788888888888753 344
No 179
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.91 E-value=1.7e-24 Score=172.93 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=121.7
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-------CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-------PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+..|+++++.++ |+||+++++++.+.+..++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 589999999999999999999989999999998654322 23567999999998 9999999999999999999
Q ss_pred EEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||||++++|.+++......+++.++..++.|++ +|++||+|+|||| |++++. .+..++.||+.+..
T Consensus 80 v~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~---~~~~~l~dfg~~~~ 151 (298)
T cd07841 80 VFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARS 151 (298)
T ss_pred EEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC---CCCEEEccceeeee
Confidence 999998899999987433799999999999998 9999999999999 888876 67899999997764
No 180
>KOG1151|consensus
Probab=99.91 E-value=2.2e-26 Score=184.18 Aligned_cols=146 Identities=21% Similarity=0.261 Sum_probs=127.0
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---------CCchhhHHHHHHHhcCCCCCCeeEEccc-
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---------HPQLHIESKIYKLMQGGVGIPQIKWCGS- 73 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---------~~~~~~E~~~l~~l~~~~~i~~~~~~~~- 73 (227)
.+++||-++.+||+|||+.||+|.|....++||+|+-..+.. .+...+|..|.+.|. ||.||++|+++.
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDyfsl 538 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDYFSL 538 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeeeeee
Confidence 357789999999999999999999999999999998544321 235788999999998 999999999987
Q ss_pred cCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----c--cccceeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 74 EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----I--TAPGIIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 74 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----l--h~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
+.+.++-|+||| |.+|.-+++. ..-+++.+++.|+-||+ + -+..|||-|||| ||++..+..+|..++.||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQ-hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQ-HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccccceeeeeecCCCchhHHHHh-hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeec
Confidence 456689999999 9999888887 57799999999999998 3 467999999999 999999988999999999
Q ss_pred eccccCC
Q psy3118 145 ECIKTRH 151 (227)
Q Consensus 145 ~~~~~~~ 151 (227)
|+++...
T Consensus 618 GLSKIMd 624 (775)
T KOG1151|consen 618 GLSKIMD 624 (775)
T ss_pred chhhhcc
Confidence 9998654
No 181
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.91 E-value=1.4e-24 Score=169.80 Aligned_cols=138 Identities=16% Similarity=0.200 Sum_probs=119.9
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.+|++.+.||+|+||.||++.+. ++..+|+|...... ....+.+|+++++.++ |+||+++++++...+..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEEEecC
Confidence 46899999999999999999875 46689999875433 2346788999999998 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++......+++..+..++.|++ +|+.|++|||||| |++++. ++..++.|||.++.
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~kl~dfg~~~~ 149 (256)
T cd05059 82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE---DNVVKVSDFGLARY 149 (256)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC---CCcEEECCccccee
Confidence 9999999986555789999999999988 9999999999999 888876 67799999997753
No 182
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.91 E-value=2.2e-24 Score=168.29 Aligned_cols=133 Identities=17% Similarity=0.244 Sum_probs=116.2
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
+.||+|+||.||+|.+..+++.+|+|....... ...+.+|+++++.++ |+||+++++++...+..++||||+ +++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 468999999999999999999999998754322 235788999999997 999999999999999999999999 999
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|.+++......+++.++..++.|++ +|++|++|||||| |++++. ++..++.|||.+..
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~ 143 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE---KNVLKISDFGMSRE 143 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC---CCcEEECccccCcc
Confidence 9999976455689999999999988 8999999999999 888865 67799999998764
No 183
>KOG0596|consensus
Probab=99.91 E-value=7.3e-25 Score=179.09 Aligned_cols=142 Identities=19% Similarity=0.186 Sum_probs=117.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-C---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-R---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+..|++++.||+||.+.||++.... ...+|+|.+.... + .+.+.+|+..|.+|++|.+|+++++|...++++|+|
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 4469999999999999999999643 3455665443322 2 245889999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 82 MELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
||+-..+|..+++..........++.+..|++ +|..||||.|||| |+++. .|..+++|||.+....+
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQP 511 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCc
Confidence 99889999999998544445457888889988 8999999999999 99988 57999999998875543
No 184
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.91 E-value=3.2e-24 Score=168.64 Aligned_cols=138 Identities=29% Similarity=0.347 Sum_probs=120.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----------CchhhHHHHHHHhcCCCCCCeeEEccccCc
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----------PQLHIESKIYKLMQGGVGIPQIKWCGSEGD 76 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 76 (227)
+|.+...||+|+||.||+|.+..++..+|+|.+...... +.+.+|+.++++++ |+||+++++++.+.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 588999999999999999999889999999987553221 24678999999998 999999999999999
Q ss_pred EEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++|||+ +++|.++++. ...+++..+..++.|++ +|+.|++|||||| |++++. .+..++.|||.++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~---~~~~~l~dfg~~~~ 155 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN---KGGIKISDFGISKK 155 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC---CCCEEecccCCCcc
Confidence 999999999 9999999987 46789999999999988 9999999999999 988865 67799999997764
Q ss_pred C
Q psy3118 150 R 150 (227)
Q Consensus 150 ~ 150 (227)
.
T Consensus 156 ~ 156 (267)
T cd06628 156 L 156 (267)
T ss_pred c
Confidence 3
No 185
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.91 E-value=3.8e-24 Score=170.57 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=123.4
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
..++.|++.+.||+|+||.||+|.+..++..+|+|....... ...+.+|+.+++.++ |+|++++++.+..++..++|
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEEEE
Confidence 345779999999999999999999999999999999865432 235778999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||+ +++|..++......+++.++..++.|++ +|+.|++|||||| |+++.. .+..++.|||.+.
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~kl~dfg~~~ 158 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL---DGDIKLADFGVSA 158 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC---CCCEEEccCccce
Confidence 9999 9999888766556799999999999998 8999999999999 888865 6789999999765
No 186
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.91 E-value=3.3e-24 Score=174.21 Aligned_cols=144 Identities=19% Similarity=0.248 Sum_probs=125.6
Q ss_pred CCceecCeEEE-EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----------------chhhHHHHHHHhcCCC
Q psy3118 1 MELRVGNKYRL-GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----------------QLHIESKIYKLMQGGV 63 (227)
Q Consensus 1 m~~~~~~~y~~-~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----------------~~~~E~~~l~~l~~~~ 63 (227)
|+..+.+||.. .+.||+|+||.||+|.+..+++.||+|......... .+.+|+++++.++ |+
T Consensus 2 ~~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ 80 (335)
T PTZ00024 2 MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HE 80 (335)
T ss_pred CccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Cc
Confidence 77888999975 578999999999999999999999999876532211 3678999999998 99
Q ss_pred CCCeeEEccccCcEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCC
Q psy3118 64 GIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTG 137 (227)
Q Consensus 64 ~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~ 137 (227)
||+++++++...+..+++|||+.++|.+++.. ...+++..+..++.|++ +|+.|++|+|||| |+++.. .+
T Consensus 81 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~---~~ 156 (335)
T PTZ00024 81 NIMGLVDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINS---KG 156 (335)
T ss_pred ceeeeeEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECC---CC
Confidence 99999999999999999999997799999876 56799999999999998 9999999999999 998876 56
Q ss_pred eeeEEeeecccc
Q psy3118 138 EEVAIKLECIKT 149 (227)
Q Consensus 138 ~~~~~~~~~~~~ 149 (227)
..++.|||.+..
T Consensus 157 ~~kl~dfg~~~~ 168 (335)
T PTZ00024 157 ICKIADFGLARR 168 (335)
T ss_pred CEEECCccceee
Confidence 789999997753
No 187
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.91 E-value=2.8e-24 Score=168.82 Aligned_cols=139 Identities=22% Similarity=0.258 Sum_probs=117.0
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..++|++.+.||+|+||.||+|.+..+ ..+|+|..+.... ...+.+|+++++.++ |+||+++++.+.. +..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~lv~e 80 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTE 80 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCC-CCCcceEEEEECC-CCcEEEEE
Confidence 457899999999999999999987655 4699999865332 346788999999998 9999999987754 45799999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++..+..++.|++ +|++|++|||||| |++++. .+..++.|||.+..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~---~~~~~L~dfg~~~~ 151 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE---NLVCKVADFGLARL 151 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC---CCcEEeccCCceee
Confidence 99 89999999864 34688999999999988 9999999999999 888876 57789999997753
No 188
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.91 E-value=5.3e-24 Score=167.00 Aligned_cols=140 Identities=21% Similarity=0.230 Sum_probs=121.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.++|++.+.||+|++|.||+|.+. ++..||+|.++.... ...+.+|+.++++++ |+|++++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCC-CCCccceeEEEecCCCeeeeeec
Confidence 467999999999999999999964 457899999865432 245788999999998 99999999999999999999999
Q ss_pred C-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 85 L-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 85 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+ +++|.+++... ...+++.++..++.|++ +|++|++|||||| |+++.. .+..+++|||.+...
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~l~dfg~~~~~ 153 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE---NNICKVADFGLARVI 153 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC---CCCEEECCcceEEEc
Confidence 9 99999999864 24689999999999998 9999999999999 888876 577999999977643
No 189
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.91 E-value=8.1e-24 Score=165.78 Aligned_cols=140 Identities=24% Similarity=0.326 Sum_probs=124.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.++|++.+.||+|+||.||+|.+..++..+|+|...... ....+.+|+++++.++ |+|++++++.+.+.+..+++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEEEEe
Confidence 368999999999999999999998899999999986543 2346888999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++......+++.++..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+..
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~g~~~~ 150 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE---DGDVKLADFGVSAQ 150 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC---CCCEEECccccchh
Confidence 99 8899999887546899999999999998 9999999999999 888875 67799999997653
No 190
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.91 E-value=3.1e-24 Score=167.65 Aligned_cols=136 Identities=18% Similarity=0.265 Sum_probs=117.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
++|++.+.||+|+||.||++.. +++.+|+|..+.+.....+.+|+.++++++ |+|++++++++..+. .+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~-~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLH-HKNLVRLLGVILHNG-LYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCC-CCCcCeEEEEEcCCC-cEEEEECCC
Confidence 5799999999999999999864 788999999866545557888999999998 999999998887654 69999999
Q ss_pred CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 ~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++... ...+++.++..++.|++ +|++|++|||||| |+++.. .+..+++|||.+..
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~---~~~~kl~Dfg~~~~ 149 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE---DGVAKVSDFGLARV 149 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC---CCcEEECCCcccee
Confidence 99999999864 34688999999999988 9999999999999 888865 57789999997753
No 191
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.91 E-value=1.7e-24 Score=176.06 Aligned_cols=141 Identities=13% Similarity=0.229 Sum_probs=116.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEcccc-Cc
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSE-GD 76 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~ 76 (227)
.++|++.+.||+|+||.||+|.+. .+++.||+|.++..... +.+..|+.+++++.+|+||+++++++.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 468999999999999999999753 34578999988643222 3467799999999669999999987764 45
Q ss_pred EEEEEEeCC-CCCHHHHHhhCC----------------------------------------------------------
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCS---------------------------------------------------------- 97 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~---------------------------------------------------------- 97 (227)
..+++|||+ +++|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 688999999 999999986421
Q ss_pred --CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 98 --RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 98 --~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+..
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~---~~~vkL~DfG~a~~ 222 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE---NNVVKICDFGLARD 222 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC---CCcEEEeccccchh
Confidence 2578889999999998 9999999999999 888875 57799999998764
No 192
>KOG0201|consensus
Probab=99.91 E-value=7.8e-26 Score=180.18 Aligned_cols=138 Identities=18% Similarity=0.237 Sum_probs=123.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
...|...+.||+|+||.||+|.+..+++.||+|+++..... +.++.|+.++..++ ++||.+.|+.+..+..+|++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHHH
Confidence 45788899999999999999999999999999999876433 46888999999998 799999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
||| ||++.++++. +..+.+.++..++++++ +|..+.+|||||+ |+++.. .|.+++.|||-+.
T Consensus 91 ey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~---~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE---SGDVKLADFGVAG 159 (467)
T ss_pred HHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEec---cCcEEEEecceee
Confidence 999 9999999997 45568888888888887 9999999999999 888877 5899999999664
No 193
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.91 E-value=5.1e-24 Score=167.82 Aligned_cols=139 Identities=13% Similarity=0.190 Sum_probs=120.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCc---EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGE---EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~---~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
++|++.+.||+|+||.||+|.+..+++ .||+|....... ...+..|+.+++.++ ||||+++.+++.+++..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCceEE
Confidence 469999999999999999999876665 699998754321 236788999999997 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+|||+ +++|.+++......+++.++..++.|++ +|++|++|+|||| |++++. .+..++.|||.+..
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~---~~~~kl~dfg~~~~ 155 (269)
T cd05065 83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRF 155 (269)
T ss_pred EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC---CCcEEECCCccccc
Confidence 99999 8999999987556789999999999988 8999999999999 888865 56788999997653
No 194
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.91 E-value=7.8e-25 Score=173.44 Aligned_cols=139 Identities=15% Similarity=0.225 Sum_probs=123.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.++|++.+.||.|+||.||++.+..++..+|+|....... .+.+.+|++++++++ |+|++++++.+..++..++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEee
Confidence 3579999999999999999999988999999999865432 235778999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|+ +++|.+++......+++.++..++.|++ +|++||+|+|||| |++++. ++..++.|||.+.
T Consensus 83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~---~~~~~l~d~g~~~ 151 (280)
T cd06611 83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL---DGDVKLADFGVSA 151 (280)
T ss_pred ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC---CCCEEEccCccch
Confidence 99 9999999887556799999999999998 8999999999999 888865 6789999998764
No 195
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.91 E-value=8.3e-24 Score=169.10 Aligned_cols=138 Identities=24% Similarity=0.298 Sum_probs=122.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.+|++.+.||.|+||.||+|.+..+++.+|+|.+.... ....+.+|+.+++.++ |+|++++++.+...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEEEEEe
Confidence 47999999999999999999999999999999886543 2346778999999998 99999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+ +++|.+++.. ..+++.++..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+...
T Consensus 98 ~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~---~~~~kl~dfg~~~~~ 165 (296)
T cd06655 98 LAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQI 165 (296)
T ss_pred cCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEccCccchhc
Confidence 9 9999998875 5689999999999988 9999999999999 888865 678999999976543
No 196
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.91 E-value=1.1e-23 Score=164.57 Aligned_cols=138 Identities=16% Similarity=0.196 Sum_probs=118.2
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEcccc-CcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSE-GDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~~~~lv~ 82 (227)
+|++.+.||+|++|.||++.+..+++.+|+|.+..... .+.+.+|++++++++ |+|++++.+.+.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEEe
Confidence 48999999999999999999999999999999865322 235778999999998 9999999887664 45689999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||+ +++|.+.+... ...+++.++..++.|++ +|++|++|+|||| |++++. .+..++.||+.+..
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~---~~~~~l~df~~~~~ 151 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR---TNIIKVGDLGIARV 151 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec---CCcEEEecccceEE
Confidence 999 89999998864 45689999999999988 9999999999999 888865 67899999997753
No 197
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.91 E-value=1.8e-23 Score=163.45 Aligned_cols=139 Identities=22% Similarity=0.211 Sum_probs=121.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|+||.||++.+..+++.+|+|.+.... ....+.+|+.++++++ |+||+++.+++.+.+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEEe
Confidence 6899999999999999999999999999999886432 1235788999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|+ +++|.+.+... ...+++.++..++.|++ +|++|++|+||+| |++++. .+...+.||+.+...
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~---~~~~~l~d~~~~~~~ 151 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---DGTIKLGDFGIARVL 151 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEEeeccceeec
Confidence 99 99999998764 34688999999999988 9999999999999 888866 567899999977643
No 198
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.91 E-value=5e-24 Score=169.11 Aligned_cols=185 Identities=16% Similarity=0.188 Sum_probs=139.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|++|.||+|.+..++..||+|.+..... ...+.+|+.+++.++ |+|++++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEEe
Confidence 58999999999999999999999999999998864322 235778999999998 9999999999999999999999
Q ss_pred CCCCCHHHHHhhC--CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 84 LLGPSLEDLFNFC--SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 84 ~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+.++|.+++... +..+++.++..++.|++ +|++|++|||||| |++++. ++..++.|||.+........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 80 FLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred cCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC---CCcEEECcccceeecCCCcc
Confidence 9977898888754 25789999999999998 9999999999999 988876 67899999998764322110
Q ss_pred hHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 156 IESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.+..-.+++.. |.. ..+........++|.+|..+++++.+.
T Consensus 157 ----~~~~~~~~~~y~aPE~-~~~~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 157 ----VYTHEVVTLWYRAPEV-LLGSPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred ----cccCCcccccccChHH-hcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence 00000011110 111 111111122356788899999998864
No 199
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.91 E-value=3.1e-24 Score=172.68 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=120.4
Q ss_pred eEEEEeeecccCcceEEEEEEcC--CCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccC--cEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNIS--TGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEG--DYN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~--~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~ 78 (227)
+|.+.+.||+|+||.||+|.+.. ++..+|+|.+.... ....+.+|+.+++.++ ||||+++++++.+. +..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 58999999999999999999988 88999999987632 2345778999999998 99999999999887 889
Q ss_pred EEEEeCCCCCHHHHHhhC----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec-cCCCeeeEEeeecc
Q psy3118 79 VMVMELLGPSLEDLFNFC----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN-ISTGEEVAIKLECI 147 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~-~~~~~~~~~~~~~~ 147 (227)
++||||++++|.+++... ...+++..+..++.|++ +|+.||+|||||| |++++.+ ...+..++.|||.+
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 80 YLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999999977888877643 13689999999999998 9999999999999 9998762 23578899999977
Q ss_pred cc
Q psy3118 148 KT 149 (227)
Q Consensus 148 ~~ 149 (227)
..
T Consensus 160 ~~ 161 (316)
T cd07842 160 RL 161 (316)
T ss_pred cc
Confidence 64
No 200
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.91 E-value=3.4e-24 Score=167.48 Aligned_cols=137 Identities=26% Similarity=0.361 Sum_probs=120.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
+|+..+.||+|+||.||+|.+..++..+|+|.+..... ...+.+|+.+++.++ |+|++++++++..++..++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 58889999999999999999988999999998865431 135778999999997 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++||+ +++|.+++.. ...+++..+..++.|++ +|+.|++|+||+| |+++.. .+..++.||+.+..
T Consensus 80 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~---~~~~kl~d~~~~~~ 151 (258)
T cd06632 80 FLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT---NGVVKLADFGMAKQ 151 (258)
T ss_pred EEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEccCcccee
Confidence 99999 8999999987 45689999999999988 9999999999999 888876 57899999997654
No 201
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.91 E-value=2.7e-24 Score=168.34 Aligned_cols=138 Identities=15% Similarity=0.191 Sum_probs=119.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
++|++.+.||+|+||.||+|.+. .+..+|+|.+..... .+.+.+|+.++++++ ||||+++++++...+..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEEEEcC
Confidence 46999999999999999999864 345699998764332 346788999999998 999999999999888899999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++......+++.++..++.|++ +|+.|++|+|||| |++++. ++..++.|||.++.
T Consensus 82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~---~~~~kl~d~g~~~~ 149 (256)
T cd05113 82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD---QGCVKVSDFGLSRY 149 (256)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC---CCCEEECCCcccee
Confidence 9999999987545789999999999998 9999999999999 888865 57899999997753
No 202
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.91 E-value=6.1e-24 Score=168.37 Aligned_cols=134 Identities=17% Similarity=0.157 Sum_probs=116.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|.+..+... ..+.+|+.++++++ ||||+++++.+..++..+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEEe
Confidence 3688999999999999999999999999999998654222 35778999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|..+ ..+++..+..++.|++ +|+.||+|+|||| |++++. ++..++.|||.+..
T Consensus 80 ~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~---~~~~~l~dfg~~~~ 144 (279)
T cd06619 80 FMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT---RGQVKLCDFGVSTQ 144 (279)
T ss_pred cCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC---CCCEEEeeCCccee
Confidence 99 8887543 3468888888999988 9999999999999 988876 67899999997753
No 203
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.91 E-value=1.8e-23 Score=163.32 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=121.5
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+++++.++ |+|++++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999865432 235788999999998 9999999999998999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|+ +++|.+++... ...+++..+..++.|++ +|++|++|+|||| |++++.+ .+..++.||+.+...
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~~l~d~~~~~~~ 152 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH--KMVVKIGDFGISKIL 152 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEccCCCceec
Confidence 99 99999999864 34589999999999988 9999999999999 9999754 456788999977643
No 204
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91 E-value=4.4e-24 Score=169.45 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=117.2
Q ss_pred CeEEEEeeecccCcceEEEEEEc----CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNI----STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~----~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
++|++.+.||+|+||.||+|... .++..+|+|.+...... ..+.+|+++++.++ |+||+++++++..++..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCceE
Confidence 46899999999999999999853 35578999988643322 35788999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhC----------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCC
Q psy3118 80 MVMELL-GPSLEDLFNFC----------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIST 136 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~ 136 (227)
++|||+ +++|.+++... ...+++.++..++.|++ +|++|++|||||| |++++. .
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~---~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE---Q 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC---C
Confidence 999999 89999998632 12478888888999988 9999999999999 888875 5
Q ss_pred CeeeEEeeeccccC
Q psy3118 137 GEEVAIKLECIKTR 150 (227)
Q Consensus 137 ~~~~~~~~~~~~~~ 150 (227)
+..++.|||.++..
T Consensus 161 ~~~kl~dfg~~~~~ 174 (283)
T cd05090 161 LHVKISDLGLSREI 174 (283)
T ss_pred CcEEeccccccccc
Confidence 67899999987643
No 205
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.91 E-value=8.7e-24 Score=169.59 Aligned_cols=140 Identities=19% Similarity=0.251 Sum_probs=119.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccC------
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEG------ 75 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~------ 75 (227)
-++|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++ ||||+++++++...
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccccC
Confidence 35799999999999999999999999999999988654322 23567999999998 99999999876554
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++||||++++|.+++......+++.++..++.|++ +|+.|++|+|||| |+++.. .+..++.|||.+
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK---DGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC---CCcEEECcCCCc
Confidence 34699999998899998877555799999999999998 9999999999999 988876 578899999977
Q ss_pred cc
Q psy3118 148 KT 149 (227)
Q Consensus 148 ~~ 149 (227)
..
T Consensus 167 ~~ 168 (310)
T cd07865 167 RA 168 (310)
T ss_pred cc
Confidence 53
No 206
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.91 E-value=2e-24 Score=170.27 Aligned_cols=141 Identities=17% Similarity=0.266 Sum_probs=121.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEcccc------CcEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSE------GDYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~------~~~~ 78 (227)
.++|.+.+.||+|+||.||+|.+..+++.+|+|....... ...+..|+.+++++.+|+|++++.+.+.. ....
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 5679999999999999999999999999999999865432 24578899999999779999999988764 2468
Q ss_pred EEEEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 79 VMVMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|||+ +++|.+++... ...+++..+..++.|++ +|++||+|||||| |+++.. .+..++.|||.+..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~---~~~~~l~Dfg~~~~ 160 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE---NAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC---CCCEEEccCCCcee
Confidence 9999999 89999998874 35689999999999988 9999999999999 988876 56799999998753
No 207
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.91 E-value=5.4e-24 Score=170.18 Aligned_cols=139 Identities=15% Similarity=0.195 Sum_probs=117.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCc--EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGE--EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~--~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..++. .+|+|..+.... ...+.+|++++.++.+||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 579999999999999999999877765 468887753221 235788999999997699999999999998999999
Q ss_pred EeCC-CCCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCee
Q psy3118 82 MELL-GPSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
|||+ +++|.+++.... ..+++..+..++.|++ +|++||+|||||| |++++. ++..
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~---~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE---NLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC---CCeE
Confidence 9999 999999997521 2488899999999998 9999999999999 888865 5678
Q ss_pred eEEeeeccc
Q psy3118 140 VAIKLECIK 148 (227)
Q Consensus 140 ~~~~~~~~~ 148 (227)
++.|||.+.
T Consensus 159 kl~dfg~~~ 167 (297)
T cd05089 159 KIADFGLSR 167 (297)
T ss_pred EECCcCCCc
Confidence 899999775
No 208
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.91 E-value=6.9e-24 Score=165.92 Aligned_cols=137 Identities=18% Similarity=0.233 Sum_probs=117.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEcc-ccCcEEEEEEeCC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCG-SEGDYNVMVMELL 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~-~~~~~~~lv~e~~ 85 (227)
.+|++.+.||+|+||.||++.. .+..+|+|........+.+.+|+.++++++ |++++++++++ ..++..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEEEEECC
Confidence 4799999999999999999976 578899999865554556889999999998 99999999865 4556789999999
Q ss_pred -CCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.++++... ..+++..+..++.|++ +|++|++|||||| |++++. ++..++.|||.+..
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~---~~~~kl~dfg~~~~ 151 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE---DNVAKVSDFGLTKE 151 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC---CCcEEecCCcccee
Confidence 899999998642 3588999999999988 9999999999999 888865 67899999997753
No 209
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.91 E-value=1.1e-23 Score=165.14 Aligned_cols=189 Identities=20% Similarity=0.297 Sum_probs=141.3
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
||++.+.||+|+||.||+|.+..+++.+|+|.+...... ..+.+|+++++.++ |+||+++++.....+..++++|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEEe
Confidence 699999999999999999999889999999998655332 35788999999998 8999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|+ +++|.+++.. ...+++..+..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+.........
T Consensus 80 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~---~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 80 YCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred cCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEcccccccccCCCCCc
Confidence 99 9999999987 45689999999999988 9999999999999 888876 678999999977643322111
Q ss_pred HHHHHHhhccCCCC--Ceeeeccc-cCCeeEEEeeccCCCHHHHHhHc
Q psy3118 157 ESKIYKLMQGGVGI--PQIKWCGS-EGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 157 e~~~y~~l~g~~g~--p~~~~~g~-~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.........+.... |.....+. ........++.+|..+++++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~ 203 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGK 203 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCC
Confidence 11100011121111 11111111 11223456788888888888753
No 210
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.91 E-value=8.2e-24 Score=167.88 Aligned_cols=188 Identities=16% Similarity=0.115 Sum_probs=139.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|++.+.||+|+||.||+|.++.+++.+|+|........ ..+.+|+.+++.++ |+|++++++++..++..+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEEE
Confidence 5799999999999999999999999999999987654322 34678999999998 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
||+ +++|..+... ...+++.++..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+........
T Consensus 80 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 80 EYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK---QGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred eccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC---CCcEEECccccceecCCCcc
Confidence 999 6666666554 45799999999999998 9999999999999 888875 57899999997764322110
Q ss_pred hHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 156 IESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
. +....++... |.. ..+........++|.+|..+++++.+ ..+|
T Consensus 156 ~----~~~~~~~~~~~aPE~-~~~~~~~~~~~Di~slG~i~~~l~~g-~~p~ 201 (286)
T cd07847 156 D----YTDYVATRWYRAPEL-LVGDTQYGPPVDVWAIGCVFAELLTG-QPLW 201 (286)
T ss_pred c----ccCcccccccCCHHH-HhCCCCcCchhhhHHHHHHHHHHHhC-CCCC
Confidence 0 0000011100 111 11111112235678889999998886 3444
No 211
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.91 E-value=3.8e-24 Score=169.56 Aligned_cols=139 Identities=15% Similarity=0.125 Sum_probs=114.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
.++|++.+.||+|+||.||+|.+..+++ .+|+|........ ..+..|+.+++++. |+||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLD-HAYIVRLLGICPG-ASL 83 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCC-CCCcceEEEEECC-Ccc
Confidence 4679999999999999999999877776 4677776433221 24556777888887 9999999998764 456
Q ss_pred EEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 79 VMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++++||+ +++|.+++......+++..+..++.|++ +|++|++|||||| |++++. .+..++.|||.++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~---~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS---DSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC---CCcEEEcCCcccee
Confidence 8899999 9999999987556799999999999998 9999999999999 888865 57789999998764
No 212
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.91 E-value=3.5e-24 Score=171.74 Aligned_cols=142 Identities=14% Similarity=0.226 Sum_probs=118.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEc-------CCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI-------STGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEG 75 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~-------~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 75 (227)
.++|.+.+.||+|+||.||+|.+. .++..+|+|....... ...+.+|+.+++.+.+|+||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 568999999999999999999753 2345799998754322 245788999999996699999999999999
Q ss_pred cEEEEEEeCC-CCCHHHHHhhC---------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFC---------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~ 133 (227)
+..+++|||+ +++|.+++... ...+++.++..++.|++ +|++|++|||||| |+++..
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~- 172 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE- 172 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC-
Confidence 9999999999 99999998763 13477888899999988 9999999999999 888865
Q ss_pred cCCCeeeEEeeeccccC
Q psy3118 134 ISTGEEVAIKLECIKTR 150 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~~~ 150 (227)
++..++.|||.++..
T Consensus 173 --~~~~kl~D~g~~~~~ 187 (304)
T cd05101 173 --NNVMKIADFGLARDV 187 (304)
T ss_pred --CCcEEECCCccceec
Confidence 678899999987643
No 213
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.91 E-value=1.1e-23 Score=172.32 Aligned_cols=185 Identities=18% Similarity=0.141 Sum_probs=136.5
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|++.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.++++++ |+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCcc
Confidence 457889999999999999999999999999999998754321 235678999999998 99999999887643
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++||||++++|.+.+.. .+++..+..++.|++ +|+.||+|||||| |++++. .+..++.|||.+
T Consensus 92 ~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~---~~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC---CCCEEEccCccc
Confidence 35799999998899888875 289999999999988 9999999999999 988876 578999999987
Q ss_pred ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
......... ....++..+..+............++|.+|..+++++.+
T Consensus 166 ~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g 213 (353)
T cd07850 166 RTAGTSFMM-----TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 213 (353)
T ss_pred eeCCCCCCC-----CCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHC
Confidence 643221110 000111111000001111122335678889888888875
No 214
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.91 E-value=7.4e-24 Score=168.17 Aligned_cols=141 Identities=23% Similarity=0.243 Sum_probs=118.7
Q ss_pred cCeEEEEeeecccCcceEEEEE----EcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccc--cCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGT----NISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGS--EGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~----~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~--~~~~ 77 (227)
..+|++.+.||+|+||.||+|. +..++..||+|.+..... ...+.+|+++++.++ |+||+++.+++. +...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCCCc
Confidence 3579999999999999999997 345788999999754432 236788999999998 999999988654 3456
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.+++|||+ +++|.+++......+++..+..++.|++ +|++|++|||||| |+++.. ++..++.|||.+...
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~---~~~~~l~dfg~~~~~ 158 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES---ENRVKIGDFGLTKVL 158 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC---CCeEEECCCcccccc
Confidence 89999999 9999999976555689999999999988 9999999999999 888865 577899999987643
No 215
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.91 E-value=5.3e-24 Score=167.29 Aligned_cols=136 Identities=19% Similarity=0.325 Sum_probs=118.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
+|++.+.||+|+||.||+|.+ .+++.+|+|.+..... ...+.+|+++++.++ |+||+++.+++.+.+..+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence 588999999999999999986 5788999998764321 134778999999998 899999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++||+ +++|.+++.. ...+++..+..++.|++ +|+.||+|+|||| |++++. .+..++.||+.+..
T Consensus 79 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~ 151 (265)
T cd06631 79 IFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP---NGIIKLIDFGCARR 151 (265)
T ss_pred EEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC---CCeEEeccchhhHh
Confidence 999999 9999999987 46789999999999988 9999999999999 988875 67899999997653
No 216
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91 E-value=6.4e-24 Score=173.07 Aligned_cols=194 Identities=15% Similarity=0.135 Sum_probs=140.0
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccC------
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEG------ 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~------ 75 (227)
.+.++|.+.+.||.|+||.||+|.+..++..||+|.+..... ...+.+|++++++++ |+||+++++++...
T Consensus 2 ~~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC-CCcchhhHhhhccccccccc
Confidence 357899999999999999999999999999999998865432 235778999999997 99999998766543
Q ss_pred --------cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeE
Q psy3118 76 --------DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVA 141 (227)
Q Consensus 76 --------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~ 141 (227)
...+++|||++++|.+++.. ..+++..+..++.|++ +|+.||+|||||| |++++.+ ++..++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~--~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE--DLVLKI 156 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC--CceEEE
Confidence 35799999997799888874 5799999999999998 9999999999999 9888754 566889
Q ss_pred EeeeccccCCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 142 IKLECIKTRHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 142 ~~~~~~~~~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.|||.+........... ......++..+ |... .+........++|.+|..+++++.+. .+|
T Consensus 157 ~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~-~~~~~~~~~~DiwSlGvil~el~~g~-~pf 219 (342)
T cd07854 157 GDFGLARIVDPHYSHKG-YLSEGLVTKWYRSPRLL-LSPNNYTKAIDMWAAGCIFAEMLTGK-PLF 219 (342)
T ss_pred CCcccceecCCcccccc-ccccccccccccCHHHH-hCccccCchhhHHHHHHHHHHHHhCC-CCC
Confidence 99997754322111000 00000011110 1111 11111222456788999999988763 344
No 217
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.91 E-value=1.7e-23 Score=164.36 Aligned_cols=139 Identities=19% Similarity=0.219 Sum_probs=121.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|.++... ...++.+|++++++++ |++++++++++..++..+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 58999999999999999999999899999999875421 1346788999999997 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+ +++|.+++... ...+++.++..++.|++ +|+.|++|+|||| |++++. .+..++.||+.+..
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~---~~~~~l~d~~~~~~ 155 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA---TGVVKLGDLGLGRF 155 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC---CCcEEEeccceeee
Confidence 9999 99999998642 34689999999999988 9999999999999 888865 67789999997653
No 218
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.91 E-value=1.2e-23 Score=165.85 Aligned_cols=137 Identities=24% Similarity=0.377 Sum_probs=120.2
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC------------CCchhhHHHHHHHhcCCCCCCeeEEccccC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR------------HPQLHIESKIYKLMQGGVGIPQIKWCGSEG 75 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 75 (227)
+|.+.+.||.|+||.||+|.+..+++.+|+|....... .+.+..|+.+++.++ |+|++++++++..+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 68999999999999999999988999999998753211 124677999999998 99999999999999
Q ss_pred cEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+..++||||+ +++|.++++.. ..+++..+..++.|++ +|++|++|+||+| |++++. ++..++.||+.+.
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~---~~~~~l~d~~~~~ 156 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA---DGICKISDFGISK 156 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC---CCeEEEeeccccc
Confidence 9999999999 99999999873 6789999999999988 9999999999999 888875 6789999999776
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 157 ~ 157 (272)
T cd06629 157 K 157 (272)
T ss_pred c
Confidence 4
No 219
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.91 E-value=7.2e-24 Score=168.39 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=121.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|+||.||+|.+..++..+|+|.+..... ...+.+|++++++++ |+||+++++.+..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEEEe
Confidence 468999999999999999999998999999998865322 235778999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC--CCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC--SRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++..+..++.|++ +|+ .||+|||||| |+++.. .+..++.|||.+..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~ 152 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG---NGQVKLCDFGVSGN 152 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC---CCCEEEeecCCccc
Confidence 99 99999888763 23789999999999988 896 6999999999 988876 67899999997753
No 220
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.91 E-value=1.3e-24 Score=170.40 Aligned_cols=139 Identities=19% Similarity=0.244 Sum_probs=121.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..+|++.+.||.|+||.||+|.+.. +..+|+|.+..... ...+.+|+.+++.++ |+||+++++++.+.+..+++||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeEEEEe
Confidence 4579999999999999999999876 88999999866543 346888999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++..+..++.|++ +|++|++|+|||| |++++. ++..++.|||.+..
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~---~~~~kl~d~g~~~~ 153 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE---DLVCKVADFGLARL 153 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC---CceEEEccccchhh
Confidence 99 99999999864 45689999999999987 9999999999999 888865 57789999997754
No 221
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.91 E-value=1.7e-23 Score=165.90 Aligned_cols=140 Identities=12% Similarity=0.130 Sum_probs=118.6
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|+||.||+|.+..+|+.||+|.++..... ..+..|..++.+..+|+|++++++++..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 4799999999999999999999999999999988654321 2455677765565569999999999999999999999
Q ss_pred CCCCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----cccc-ceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LLGPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAP-GIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~-~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+.++|.+++... +..+++.++..++.|++ +|++ +++|||||| |++++. .+..++.|||.+..
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~---~~~~kl~dfg~~~~ 153 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR---NGQVKLCDFGISGY 153 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC---CCCEEEeecccccc
Confidence 9988998887653 34689999999999998 8997 999999999 888876 57899999998753
No 222
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.91 E-value=5e-24 Score=173.26 Aligned_cols=140 Identities=21% Similarity=0.217 Sum_probs=119.6
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccC-----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEG----- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~----- 75 (227)
.++++|++.+.||+|+||.||+|.+..+|+.||+|.+..... ..++.+|+.++++++ |+||+++++++...
T Consensus 2 ~~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFESF 80 (336)
T ss_pred ccccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC-CCCcCchhheeeccccccc
Confidence 467899999999999999999999999999999998854322 235677999999998 99999998765433
Q ss_pred cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 76 DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 76 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
...++++||++++|.+++.. ..+++..+..++.|++ +|+.||+|||||| |++++. .+..++.|||.+..
T Consensus 81 ~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~---~~~~kl~dfg~~~~ 155 (336)
T cd07849 81 NDVYIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---NCDLKICDFGLARI 155 (336)
T ss_pred ceEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC---CCCEEECcccceee
Confidence 45899999998899888864 6799999999999998 9999999999999 988876 67899999997754
No 223
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.91 E-value=6e-24 Score=168.67 Aligned_cols=138 Identities=25% Similarity=0.304 Sum_probs=116.2
Q ss_pred cCeE-EEEeeecccCcceEEEEE----EcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEcccc--C
Q psy3118 6 GNKY-RLGRKIGSGSFGDIYLGT----NISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSE--G 75 (227)
Q Consensus 6 ~~~y-~~~~~lg~G~fg~V~~~~----~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~ 75 (227)
.+|| ++.+.||+|+||+||++. ...++..+|+|.+..... ...+.+|++++++++ ||||+++++++.. .
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGG 80 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCC
Confidence 4566 999999999999998765 345778999999865432 235778999999997 9999999987654 4
Q ss_pred cEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
...+++|||+ +++|.+++.. ..+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+.
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~---~~~~~l~dfg~~~ 155 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAK 155 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC---CCcEEEeeccccc
Confidence 4689999999 9999999986 4699999999999998 9999999999999 888865 5778999999876
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 156 ~ 156 (283)
T cd05080 156 A 156 (283)
T ss_pred c
Confidence 4
No 224
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.91 E-value=1.8e-23 Score=163.91 Aligned_cols=140 Identities=21% Similarity=0.277 Sum_probs=121.5
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..++|.+.+.||+|+||.||+|.+. .+..+|+|.+..... ...+.+|+.++++++ |+|++++++++......+++||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceEEEEe
Confidence 4578999999999999999999975 557899998865432 346888999999998 9999999999998888999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++.++..++.|++ +|++|++|+|||| |++++. .+..++.|||.+..
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~---~~~~~l~d~g~~~~ 152 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE---NLVCKIADFGLARL 152 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC---CCCEEECcccccee
Confidence 99 99999999864 35789999999999988 9999999999999 888876 57889999997764
No 225
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.91 E-value=4.8e-24 Score=170.27 Aligned_cols=190 Identities=19% Similarity=0.283 Sum_probs=137.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCC--------------cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCee
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTG--------------EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQI 68 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~--------------~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~ 68 (227)
.++|++.+.||+|+||.||+|.+..++ ..||+|..+.... ...+.+|++++++++ |+|++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK-NPNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC-CCCcCeE
Confidence 358999999999999999999875432 2589998865322 235788999999998 9999999
Q ss_pred EEccccCcEEEEEEeCC-CCCHHHHHhhCC-----------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEE
Q psy3118 69 KWCGSEGDYNVMVMELL-GPSLEDLFNFCS-----------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVV 130 (227)
Q Consensus 69 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-----------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l 130 (227)
++++..++..++||||+ +++|.+++.... ..+++.+++.++.|++ +|+.|++|||||| |+++
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 99999999999999999 999999986521 1367888888999888 9999999999999 8888
Q ss_pred eeccCCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeecccc-----CCeeEEEeeccCCCHHHHHhHc-CCC
Q psy3118 131 GTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSE-----GDYNVMVMELLGPSLEDLFNFC-SRR 204 (227)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~-----~~~~~~vm~~lg~~l~~l~~~~-~~~ 204 (227)
+. .+..++.|||.+........ +. ..+.... ...|..++ ......++|.+|..+++++..+ ..+
T Consensus 163 ~~---~~~~kl~dfg~~~~~~~~~~-----~~-~~~~~~~-~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p 232 (295)
T cd05097 163 GN---HYTIKIADFGMSRNLYSGDY-----YR-IQGRAVL-PIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQP 232 (295)
T ss_pred cC---CCcEEecccccccccccCcc-----ee-ccCcCcC-ceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence 65 56789999997754321100 00 1111110 12222222 1122356788898888888754 345
Q ss_pred CC
Q psy3118 205 FS 206 (227)
Q Consensus 205 f~ 206 (227)
|.
T Consensus 233 ~~ 234 (295)
T cd05097 233 YS 234 (295)
T ss_pred Cc
Confidence 54
No 226
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.91 E-value=6.9e-24 Score=169.12 Aligned_cols=191 Identities=20% Similarity=0.220 Sum_probs=142.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC----chhhHHHHHHHhcCCCCCCeeEEccccC--cEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP----QLHIESKIYKLMQGGVGIPQIKWCGSEG--DYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~~ 79 (227)
.++|++.+.||.|+||.||+|.+..+++.+|+|.++.....+ .+.+|+.++++++ ||||+++++++..+ +..+
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEE
Confidence 357999999999999999999999899999999986543222 3567999999998 99999999888766 8899
Q ss_pred EEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 80 MVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 80 lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
++|||++++|.+++......+++.+++.++.|++ +|++|++|+|||| |++++. .+..++.|||.+......
T Consensus 83 lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~---~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN---RGILKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC---CCcEEEeecCceeeccCC
Confidence 9999997799999887555699999999999998 9999999999999 998876 578999999977633221
Q ss_pred hhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 154 LHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
... +....++... |.. ..+........++|.+|..+++++.+ ..+|.
T Consensus 160 ~~~----~~~~~~~~~~~aPE~-~~~~~~~~~~~Di~slG~~l~~l~~g-~~~f~ 208 (293)
T cd07843 160 LKP----YTQLVVTLWYRAPEL-LLGAKEYSTAIDMWSVGCIFAELLTK-KPLFP 208 (293)
T ss_pred ccc----cccccccccccCchh-hcCCccccchhhHHHHHHHHHHHHhC-CCCCC
Confidence 100 0000111111 111 11111112345678889999998876 34454
No 227
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.91 E-value=8.4e-24 Score=165.80 Aligned_cols=139 Identities=17% Similarity=0.240 Sum_probs=119.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.++|++.+.||+|+||.||+|.+ .++..+|+|.+.... ..+.+.+|+.+++.++ |+||+++++.+...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEEEEec
Confidence 46799999999999999999986 456789999875433 2346788999999998 99999999999999999999999
Q ss_pred C-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 85 L-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 85 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+ +++|.+++... ...+++..+..++.|++ +|+.|++|||||| |++++. ++..++.|||.+..
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~---~~~~~l~dfg~~~~ 152 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE---SLMCKIADFGLARV 152 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC---CCcEEECCCcccee
Confidence 9 99999998764 45688889888888888 9999999999999 888876 67789999998764
No 228
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.91 E-value=3.7e-24 Score=169.22 Aligned_cols=140 Identities=19% Similarity=0.299 Sum_probs=124.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|.+.+.||+|+||.||+|.+..+++.+|+|+..... ....+.+|.++++++++|+||+++++.+..++..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999986532 1235778999999997799999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
||++ +++|.+++.. ...+++.++..++.|++ +|+.|++|+|||| |+++.. ++..+++||+.+...
T Consensus 81 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~---~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK---DMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC---CCCEEecCCcccccc
Confidence 9999 9999999987 45799999999999998 9999999999999 988865 678999999977643
No 229
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.91 E-value=1e-23 Score=171.10 Aligned_cols=193 Identities=16% Similarity=0.140 Sum_probs=137.5
Q ss_pred eEEEEeeecccCcceEEEEEEcCC--CcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccc----cCcE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNIST--GEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGS----EGDY 77 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~--~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~----~~~~ 77 (227)
+|++.+.||+|+||.||++.+..+ +..+|+|.+..... ...+.+|+++++++.+|+||+++++... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 589999999999999999999877 88999998764322 2356789999999977999999987643 2345
Q ss_pred EEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 78 NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
.++++|+++++|.+.+.. ...+++.+++.++.|++ +|+.|++|||||| |++++. .+..+++|||.+....
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~---~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC---CCCEEeCcCCCceecc
Confidence 789999998899998876 56799999999999998 9999999999999 998876 5789999999876432
Q ss_pred CchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 152 PQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
..............|+... |... .+........++|.+|..+++++.+ ..+|.
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~~Di~slGv~l~~l~~g-~~pf~ 211 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIM-LSFQSYTKAIDVWSVGCILAELLGR-KPVFK 211 (332)
T ss_pred cccccccccccCcccCccccCcHHH-hCCCCCCcHHHHHHHHHHHHHHHhC-CcCCC
Confidence 2111000000001122111 1111 1111222235678888888888765 33443
No 230
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.91 E-value=1.4e-23 Score=164.55 Aligned_cols=140 Identities=17% Similarity=0.245 Sum_probs=118.6
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+..++|++.+.||+|+||.||+|.. .+++.+|+|....... ...+.+|+.++++++ |+|++++++++. .+..+++|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCcEEEE
Confidence 3467899999999999999999985 4578899998865432 346788999999998 999999998764 45689999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||+ +++|.+++... +..+++.++..++.|++ +|+.|++|||||| |++++. ++...+.|||.+..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~ 151 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE---TLCCKIADFGLARL 151 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC---CCCEEEccCcceee
Confidence 999 99999998764 45789999999999988 9999999999999 888876 57789999997754
No 231
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.91 E-value=6.5e-24 Score=168.53 Aligned_cols=189 Identities=17% Similarity=0.156 Sum_probs=140.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|....... .+.+.+|+++++.++ |+||+++++++..++..+++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEEE
Confidence 479999999999999999999988999999998754322 235778999999997 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
||+ +++|.++... ...+++.++..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+........
T Consensus 80 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~---~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 80 EFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ---SGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred ecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC---CCcEEEEeeeeeeeccCCcc
Confidence 999 7777776655 45689999999999998 9999999999999 888866 67899999997764322111
Q ss_pred hHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 156 IESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.+....++... |... .+........++|.+|..+++++.+ ..+|.
T Consensus 156 ----~~~~~~~~~~y~aPE~~-~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~ 202 (286)
T cd07846 156 ----VYTDYVATRWYRAPELL-VGDTKYGRAVDIWAVGCLVTEMLTG-EPLFP 202 (286)
T ss_pred ----ccCcccceeeccCcHHh-ccccccCchHhHHHHHHHHHHHHcC-CCCCC
Confidence 00001111100 1111 1111111235678889999999886 34453
No 232
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.91 E-value=1.2e-23 Score=164.37 Aligned_cols=140 Identities=25% Similarity=0.237 Sum_probs=121.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|+||.||++.+..++..+|+|.+... ...+.+.+|+.+++.++ |+|++++++.+..++..++++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEEe
Confidence 589999999999999999999999999999998654 22346778999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|+ +++|.+++... ...+++..+..++.|++ +|+.+++|+|||| |++++.+ ....++.||+.+...
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~--~~~~~l~d~~~~~~~ 152 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN--GMVAKLGDFGIARQL 152 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC--CCeEEecccccchhc
Confidence 99 99999998764 33589999999999988 9999999999999 9888763 344688999876543
No 233
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.90 E-value=4.7e-24 Score=166.55 Aligned_cols=141 Identities=18% Similarity=0.228 Sum_probs=126.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|..+.....+.+.+|++++++++ |+|++++++.+.++...++++||+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEEEecC
Confidence 4689999999999999999999988899999999876544567889999999996 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++|.+++......+++..+..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+...
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~---~~~~~l~dfg~~~~~ 149 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE---EGQAKLADFGVSGQL 149 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC---CCcEEEcccccchhc
Confidence 8999999987567889999999999988 8999999999999 888866 577999999977643
No 234
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.90 E-value=5.4e-24 Score=168.41 Aligned_cols=142 Identities=19% Similarity=0.249 Sum_probs=117.8
Q ss_pred eecCeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccC
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEG 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 75 (227)
+..++|++.+.||+|+||.||+|.+. .++..+|+|....... ...+.+|+.+++.++ |+||+++++++.++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCC
Confidence 35678999999999999999999864 2356799998754322 234778999999997 99999999999999
Q ss_pred cEEEEEEeCC-CCCHHHHHhhCC---------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCee
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFCS---------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
...++||||+ +++|.+++.... ..+++..+..++.|++ +|+.|++|||||| |++++. .+..
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~---~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC---CCCE
Confidence 9999999999 999999987531 2356778888888888 9999999999999 888876 6778
Q ss_pred eEEeeecccc
Q psy3118 140 VAIKLECIKT 149 (227)
Q Consensus 140 ~~~~~~~~~~ 149 (227)
++.|||.+..
T Consensus 159 ~l~dfg~~~~ 168 (277)
T cd05062 159 KIGDFGMTRD 168 (277)
T ss_pred EECCCCCccc
Confidence 9999997753
No 235
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=1.1e-23 Score=171.14 Aligned_cols=141 Identities=15% Similarity=0.225 Sum_probs=117.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC-------CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST-------GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEG 75 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~-------~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 75 (227)
..+|++++.||+|+||.||+|.+... +..+|+|....... ...+.+|+.+++++.+|+||+++++++..+
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 45799999999999999999986432 23689998764322 235788999999996699999999999999
Q ss_pred cEEEEEEeCC-CCCHHHHHhhC---------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFC---------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~ 133 (227)
+..++++||+ +++|.+++... ...+++.++..++.|++ +|++|++|||||| |++++.
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~- 169 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE- 169 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC-
Confidence 9999999999 99999998752 12478888888999988 9999999999999 888865
Q ss_pred cCCCeeeEEeeecccc
Q psy3118 134 ISTGEEVAIKLECIKT 149 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~~ 149 (227)
.+..++.|||.++.
T Consensus 170 --~~~~kL~Dfg~~~~ 183 (334)
T cd05100 170 --DNVMKIADFGLARD 183 (334)
T ss_pred --CCcEEECCccccee
Confidence 56789999997753
No 236
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.90 E-value=8.2e-24 Score=167.07 Aligned_cols=184 Identities=17% Similarity=0.167 Sum_probs=140.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||.|+||.||+|.+..+++.+|+|........ ..+.+|+.+++.++ |+|++++.+++.++...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEEE
Confidence 4789999999999999999999999999999998654322 35778999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|+ +++|.+++.. .++++.++..++.|++ +|++|++|+||+| |++++. .+..++.|||.+.........
T Consensus 80 ~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 80 YCGGGSCLDLLKP--GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE---EGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred eeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEEcccccceeecccccc
Confidence 99 9999999886 4799999999999998 8999999999999 888877 678999999987644322110
Q ss_pred HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.. ...++.++..+............++|.+|..+++++.+
T Consensus 155 ~~----~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg 194 (274)
T cd06609 155 RN----TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKG 194 (274)
T ss_pred cc----cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence 00 01121111111111111122345678888888888775
No 237
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.90 E-value=4e-24 Score=173.22 Aligned_cols=133 Identities=18% Similarity=0.148 Sum_probs=114.3
Q ss_pred EEeeeccc--CcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 11 LGRKIGSG--SFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 11 ~~~~lg~G--~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
++++||+| +|++||++.++.+|+.||+|.+..... ...+.+|+++++.++ ||||+++++++..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 788999999999999999999865432 235677999999997 99999999999999999999999
Q ss_pred C-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 85 L-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 85 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
+ +++|.+++... ...+++..++.++.|++ +|++||+|||||| |+++.. .+..++.||+..
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~---~~~~~l~~~~~~ 148 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV---DGKVYLSGLRSN 148 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec---CCcEEEcccchh
Confidence 9 99999999754 34689999999999998 9999999999999 888876 566777787643
No 238
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.90 E-value=1.8e-23 Score=165.64 Aligned_cols=188 Identities=16% Similarity=0.100 Sum_probs=139.2
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccC--cEEEEEEe
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEG--DYNVMVME 83 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~~lv~e 83 (227)
|++.+.||+|+||.||+|.+..+++.+|+|..+..... ....+|+.++.++.+|+|++++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 67899999999999999999999999999987653221 23456899999998899999999998877 88999999
Q ss_pred CCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 84 LLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
|++++|.+.+......+++.++..++.|++ +|+.|++|||||| |++++. +..++.|||.+..........
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD----DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC----CCeEEEecccccccccCCCcC
Confidence 997788888876456789999999999998 9999999999999 888865 789999999776432211110
Q ss_pred HHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCH
Q psy3118 158 SKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL 207 (227)
Q Consensus 158 ~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~ 207 (227)
. ..++... |... .+........++|.+|..+++++.+ ..+|+.
T Consensus 157 ~-----~~~~~~y~aPE~~-~~~~~~~~~~Di~slGv~l~el~~~-~~p~~~ 201 (282)
T cd07831 157 E-----YISTRWYRAPECL-LTDGYYGPKMDIWAVGCVFFEILSL-FPLFPG 201 (282)
T ss_pred C-----CCCCcccCChhHh-hcCCCCCcchhHHHHHHHHHHHHcC-CcCCCC
Confidence 0 0111111 1111 1111112245678889999998875 445543
No 239
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.90 E-value=6.5e-24 Score=168.33 Aligned_cols=139 Identities=17% Similarity=0.233 Sum_probs=118.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCC-----cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTG-----EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
++|++.+.||+|+||.||+|.+...+ ..+|+|....... ...+.+|+.+++.++ ||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCCce
Confidence 46899999999999999999875544 6799998754332 235788999999998 99999999999988899
Q ss_pred EEEEeCC-CCCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCC
Q psy3118 79 VMVMELL-GPSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIST 136 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~ 136 (227)
+++|||+ +++|.+++.... ..+++.++..++.|++ +|++|++|||||| |++++. .
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~---~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE---G 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC---C
Confidence 9999999 999999987631 4578888999999988 9999999999999 888865 5
Q ss_pred CeeeEEeeecccc
Q psy3118 137 GEEVAIKLECIKT 149 (227)
Q Consensus 137 ~~~~~~~~~~~~~ 149 (227)
+..++.|||.+..
T Consensus 161 ~~~~L~dfg~~~~ 173 (283)
T cd05048 161 LTVKISDFGLSRD 173 (283)
T ss_pred CcEEECCCcceee
Confidence 6789999998763
No 240
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.90 E-value=1.2e-23 Score=167.42 Aligned_cols=138 Identities=16% Similarity=0.308 Sum_probs=120.5
Q ss_pred eEEEEeeecccCcceEEEEEEc---CCCcEEEEEEeeecC------CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNI---STGEEVAIKLECIKT------RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
+|++.+.||+|+||.||+|.+. .+|..||+|+++... ..+.+.+|+.+++.+.+|++|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999874 478999999986532 1245778999999998799999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 79 VMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|||+ +++|.+++.. ...+++..+..++.|++ +|+.|++|||||| |++++. .+..++.|||.+..
T Consensus 81 ~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC---CCCEEEeeCcccee
Confidence 9999999 9999999987 46789999999988888 9999999999999 999976 57899999997764
No 241
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=1.6e-23 Score=168.74 Aligned_cols=142 Identities=15% Similarity=0.208 Sum_probs=118.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcC-------CCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIS-------TGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEG 75 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~-------~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 75 (227)
.++|++.+.||+|+||.||+|.+.. ....+|+|........ ..+.+|+.+++.+.+|+||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 4689999999999999999998632 3457999987643322 24678999999996699999999999988
Q ss_pred cEEEEEEeCC-CCCHHHHHhhC---------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFC---------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~ 133 (227)
+..+++|||+ +++|.+++... ...+++.++..++.|++ +|++|++|||||| |+++..
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~- 169 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE- 169 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC-
Confidence 8999999999 99999999753 13588889999999988 9999999999999 888865
Q ss_pred cCCCeeeEEeeeccccC
Q psy3118 134 ISTGEEVAIKLECIKTR 150 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~~~ 150 (227)
++..++.|||.++..
T Consensus 170 --~~~~kL~Dfg~~~~~ 184 (314)
T cd05099 170 --DNVMKIADFGLARGV 184 (314)
T ss_pred --CCcEEEccccccccc
Confidence 578999999988643
No 242
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.90 E-value=9.4e-24 Score=165.14 Aligned_cols=135 Identities=17% Similarity=0.131 Sum_probs=112.3
Q ss_pred eeecccCcceEEEEEEcCCC----------cEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 13 RKIGSGSFGDIYLGTNISTG----------EEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~----------~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+.||+|+||.||+|.+..++ ..+++|....... ...+.+|+.++++++ |+||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLS-HKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCC-CcchhheeeEEec-CCcEEE
Confidence 46899999999999997766 3578887654433 456788999999997 9999999998887 667999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeecc----CCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNI----STGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~----~~~~~~~~~~~~~~~ 149 (227)
|||+ +++|.+++......+++..+..++.|++ +|++||+|||||| |++++.+. .....++.|||.+..
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 9999 9999999987544789999999999998 9999999999999 99988643 113678899997764
No 243
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.90 E-value=1.5e-23 Score=165.16 Aligned_cols=141 Identities=21% Similarity=0.268 Sum_probs=122.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccC------cEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEG------DYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~------~~~ 78 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|....... .+.+.+|+.+++++.+|+||+++++++.+. ...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 5789999999999999999999988899999999865432 346888999999997799999999988653 458
Q ss_pred EEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 79 VMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+++|||+ +++|.+++... +..+++..+..++.|++ +|+.|++|+||+| |++++. .+..++.||+.+.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~---~~~~~l~d~~~~~ 161 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK---NAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc---CCeEEECCCccce
Confidence 9999999 89999998753 35789999999999988 9999999999999 888876 5778999999765
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 162 ~ 162 (275)
T cd06608 162 Q 162 (275)
T ss_pred e
Confidence 3
No 244
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.90 E-value=6.2e-24 Score=168.13 Aligned_cols=143 Identities=16% Similarity=0.230 Sum_probs=121.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcC-----CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIS-----TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|++.+.||+|+||.||+|.+.. ++..||+|....... ...+.+|+.+++.++ |+||+++++++.+.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN-HQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC
Confidence 4679999999999999999999876 678899998754322 234788999999998 9999999999888888
Q ss_pred EEEEEeCC-CCCHHHHHhhCC------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
.+++|||+ |++|.+++.... ..+++..++.++.|++ +|++|++|||||| |+++..+......++.||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 99999999 999999987642 2588999999999998 8999999999999 888876543456789999
Q ss_pred ecccc
Q psy3118 145 ECIKT 149 (227)
Q Consensus 145 ~~~~~ 149 (227)
|.+..
T Consensus 164 g~~~~ 168 (277)
T cd05036 164 GMARD 168 (277)
T ss_pred ccccc
Confidence 97764
No 245
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.90 E-value=8.9e-24 Score=169.38 Aligned_cols=141 Identities=16% Similarity=0.191 Sum_probs=119.1
Q ss_pred cCeEEEEeeecccCcceEEEEEE-----cCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTN-----ISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~-----~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|.+.+.||+|+||.||+|.+ ..++..+|+|..+.... .+.+.+|+.+++++.+|+||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 45899999999999999999975 23456899998765322 23578899999999669999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
.+++|||+ +++|.++++... ..+++.++..++.|++ +|++||+|+|||| |++++. .+..++.|||.+..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~---~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH---GKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC---CCeEEECCCccccc
Confidence 99999999 999999997642 3489999999999988 8999999999999 888865 56788999998763
No 246
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.90 E-value=1.6e-23 Score=163.80 Aligned_cols=139 Identities=19% Similarity=0.260 Sum_probs=121.6
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.++|++.+.||+|+||.||+|.. .++.+|+|....+.. .+++.+|+.+++.++ |+|++++++++.+.+..+++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEEEEe
Confidence 56799999999999999999987 588999999866543 346888999999998 99999999999988899999999
Q ss_pred C-CCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 85 L-GPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 85 ~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+ +++|.++++... ..+++..+..++.|++ +|++|++|+|||| |++++. .+..++.|||.+...
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~---~~~~~l~d~g~~~~~ 152 (256)
T cd05039 82 MAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE---DLVAKVSDFGLAKEA 152 (256)
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC---CCCEEEccccccccc
Confidence 9 899999998742 3689999999999998 9999999999999 888865 677899999977643
No 247
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.90 E-value=2.8e-23 Score=164.98 Aligned_cols=138 Identities=22% Similarity=0.187 Sum_probs=118.9
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+|++++++++ |+||+++.+++..++..+++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence 47999999999999999999999999999999875432 2346788999999998 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||+ ++.+..+... ...+++.++..++.|++ +|++|++|+||+| |++++. .+..++.|||.+..
T Consensus 80 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~---~~~~kl~d~g~~~~ 149 (288)
T cd07833 80 EYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE---SGVLKLCDFGFARA 149 (288)
T ss_pred ecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEEeeecccc
Confidence 999 5555444443 56799999999999998 8999999999999 999876 67899999997653
No 248
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.90 E-value=1.7e-23 Score=165.37 Aligned_cols=140 Identities=19% Similarity=0.236 Sum_probs=118.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC-----CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST-----GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~-----~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|++.+.||+|+||.||+|.+... +..+|+|....... ...+.+|+.+++.++ |+||+++++++..+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN-CHHVVRLLGVVSTGQP 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCCCC
Confidence 46899999999999999999998643 37899999754432 225778999999997 9999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCC---------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeE
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS---------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVA 141 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~ 141 (227)
.+++|||+ +++|.+++.... ..+++..+..++.|++ +|+.|++|||||| |++++. .+..++
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~---~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE---DLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC---CCCEEE
Confidence 99999999 999999987531 2367888999999988 9999999999999 888876 577899
Q ss_pred Eeeecccc
Q psy3118 142 IKLECIKT 149 (227)
Q Consensus 142 ~~~~~~~~ 149 (227)
.|||.++.
T Consensus 161 ~dfg~~~~ 168 (277)
T cd05032 161 GDFGMTRD 168 (277)
T ss_pred CCcccchh
Confidence 99997753
No 249
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.90 E-value=1.6e-23 Score=164.52 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=121.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||.|+||.||+|.+..++..+|+|....+. ....+.+|+++++.++ |+|++++++.+..++..+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEEEe
Confidence 47999999999999999999998899999999986543 2245788999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC--CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC--SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++ +++|.+++... ...+++..+..++.|++ +|+.|++|+|||| |++++. ++..++.||+.+..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~---~~~~~l~df~~~~~ 151 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE---DGSVKIADFGVSAS 151 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC---CCCEEEcccchHHH
Confidence 99 99999999763 24689999999999998 9999999999999 888876 56799999997653
No 250
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.90 E-value=8e-24 Score=168.88 Aligned_cols=140 Identities=17% Similarity=0.236 Sum_probs=119.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCC----------------cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTG----------------EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIP 66 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~----------------~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~ 66 (227)
.++|++.+.||+|+||.||+|.+..++ ..+|+|.+..... .+.+.+|++++++++ |+|++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS-DPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC-CCCEe
Confidence 368999999999999999999876543 4689998765432 245778999999998 99999
Q ss_pred eeEEccccCcEEEEEEeCC-CCCHHHHHhhCC----------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEE
Q psy3118 67 QIKWCGSEGDYNVMVMELL-GPSLEDLFNFCS----------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMV 129 (227)
Q Consensus 67 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~ 129 (227)
++++++..++..+++||++ +++|.+++.... ..+++..++.++.|++ +|+.|++|||||| |++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 9999999989999999999 999999987642 2689999999999988 9999999999999 888
Q ss_pred EeeccCCCeeeEEeeecccc
Q psy3118 130 VGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~ 149 (227)
++. .+...+.|||.+..
T Consensus 163 i~~---~~~~~l~dfg~~~~ 179 (296)
T cd05051 163 VGK---NYTIKIADFGMSRN 179 (296)
T ss_pred ecC---CCceEEccccceee
Confidence 876 47889999997753
No 251
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.90 E-value=1e-23 Score=166.07 Aligned_cols=133 Identities=14% Similarity=0.081 Sum_probs=108.4
Q ss_pred eeecccCcceEEEEEEc--CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNI--STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|... .....+|+|.+...... ..+.+|+.+++.++ |+||+++++.+.+....+++|||+ +
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeCCC
Confidence 36899999999999643 23457888876543222 24678999999997 999999999999999999999999 9
Q ss_pred CCHHHHHhhCC----CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCS----RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~----~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+++.... ...++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~---~~~~kl~dfg~~~~ 149 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA---DLSVKIGDYGLALE 149 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC---CCcEEEeccccccc
Confidence 99999997642 2346777888888888 9999999999999 888876 57789999998754
No 252
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.90 E-value=2e-23 Score=165.76 Aligned_cols=142 Identities=18% Similarity=0.257 Sum_probs=120.1
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccc-----cCcEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGS-----EGDYN 78 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~-----~~~~~ 78 (227)
..++|++.+.||+|+||.||+|.+..+++.+|+|....... ...+.+|+.+++++.+|+||+++++++. .++..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 45789999999999999999999999999999998754322 2457789999999966999999998763 45679
Q ss_pred EEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 79 VMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+++|||+ |++|.+++... ...+++..+..++.|++ +|+.+++|||||| |+++.. .+..++.|||.+.
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~---~~~~kl~dfg~~~ 172 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVKLVDFGVSA 172 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC---CCCEEEccCCcee
Confidence 9999999 99999987632 35688899999999988 9999999999999 888876 5668899999775
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 173 ~ 173 (286)
T cd06638 173 Q 173 (286)
T ss_pred e
Confidence 4
No 253
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.90 E-value=2.8e-23 Score=163.41 Aligned_cols=138 Identities=22% Similarity=0.308 Sum_probs=118.6
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-------CCchhhHHHHHHHhcCCCCCCeeEEcccc--CcE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-------HPQLHIESKIYKLMQGGVGIPQIKWCGSE--GDY 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~~~ 77 (227)
.+|+..+.||+|+||.||+|.+..++..+|+|.+..... ...+.+|+.+++.++ |+||+++++++.+ +..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKT 80 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCE
Confidence 468999999999999999999999999999998764321 124777999999997 9999999988764 467
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
.++++||+ +++|.+++.. ...+++.....++.|++ +|+.||+|||||| |++++. ++..++.|||.+..
T Consensus 81 ~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~---~~~~~l~dfg~~~~ 155 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS---AGNVKLGDFGASKR 155 (266)
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC---CCCEEEccCCCccc
Confidence 89999999 8999999987 45689999999999988 9999999999999 888865 56799999997753
No 254
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.90 E-value=2.6e-23 Score=169.54 Aligned_cols=140 Identities=23% Similarity=0.296 Sum_probs=120.8
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCc---
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGD--- 76 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--- 76 (227)
.+.++|++.+.||+|+||.||+|.+..++..||+|....... ...+.+|+.+++.++ |+||+++++++..+.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLSLD 90 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCcccc
Confidence 367899999999999999999999999999999998854322 235778999999998 999999998887543
Q ss_pred ---EEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 77 ---YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 77 ---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
..++|||++|++|.+++.. ..+++..+..++.|++ +|+.||+|||||| |++++. .+..+++|||.+
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~---~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE---DCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeecccc
Confidence 4589999999899988874 5799999999999998 9999999999999 988876 577999999977
Q ss_pred cc
Q psy3118 148 KT 149 (227)
Q Consensus 148 ~~ 149 (227)
..
T Consensus 166 ~~ 167 (343)
T cd07880 166 RQ 167 (343)
T ss_pred cc
Confidence 63
No 255
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.90 E-value=2e-23 Score=165.58 Aligned_cols=137 Identities=18% Similarity=0.266 Sum_probs=120.7
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
+|++.+.||.|++|.||+|.+..++..+|+|.+..... ...+.+|+.+++.++ |+|++++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEEec
Confidence 58999999999999999999999999999998865432 235678999999997 99999999999999999999999
Q ss_pred CCCCHHHHHhhCC--CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 85 LGPSLEDLFNFCS--RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 85 ~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+.++|.+++.... ..+++..+..++.|++ +|+.|++|||||| |++++. ++..++.|||.+.
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~---~~~~~l~d~g~~~ 148 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK---RGELKLADFGLAR 148 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC---CCcEEEeecchhh
Confidence 9779999887643 4689999999999998 9999999999999 988875 6789999999775
No 256
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=1.6e-23 Score=168.28 Aligned_cols=141 Identities=16% Similarity=0.242 Sum_probs=118.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEcC-------CCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIS-------TGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEG 75 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~-------~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~ 75 (227)
.++|.+.+.||+|+||.||+|.+.. +...+|+|........ ..+.+|+++++++.+|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4689999999999999999998643 2346999998654221 35777999999996699999999999999
Q ss_pred cEEEEEEeCC-CCCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec
Q psy3118 76 DYNVMVMELL-GPSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 76 ~~~~lv~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~ 133 (227)
+..+++|||+ +++|.+++.... ..+++.+++.++.|++ +|++|++|||||| |++++.
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~- 175 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE- 175 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC-
Confidence 9999999999 899999997631 2488899999999988 9999999999999 988876
Q ss_pred cCCCeeeEEeeecccc
Q psy3118 134 ISTGEEVAIKLECIKT 149 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~~ 149 (227)
.+..++.|||.+..
T Consensus 176 --~~~~kL~dfg~a~~ 189 (307)
T cd05098 176 --DNVMKIADFGLARD 189 (307)
T ss_pred --CCcEEECCCccccc
Confidence 56789999997753
No 257
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.90 E-value=1.3e-23 Score=164.79 Aligned_cols=139 Identities=23% Similarity=0.257 Sum_probs=117.6
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..++|++.+.||+|+||.||+|.+. .+..+|+|....... .+.+.+|+.++++++ |+++++++++... +..+++||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~lv~e 80 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLR-HDKLVQLYAVVSE-EPIYIVTE 80 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcC-CCceEEEEeEECC-CCcEEEEE
Confidence 4568999999999999999999864 566799998865432 346789999999998 9999999988754 45799999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++.++..++.|++ +|++|++|||||| |++++. .+..++.|||.+..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~---~~~~~l~dfg~~~~ 151 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD---GLVCKIADFGLARL 151 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC---CceEEeCCceeeee
Confidence 99 99999998764 34689999999999998 8999999999999 888865 56788999998764
No 258
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.90 E-value=1.9e-23 Score=166.96 Aligned_cols=140 Identities=16% Similarity=0.238 Sum_probs=117.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcC----------------CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIS----------------TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIP 66 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~----------------~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~ 66 (227)
.++|++.+.||+|+||.||++.+.. ++..+|+|....... ...+.+|+.+++.++ |+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK-DPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcc
Confidence 4679999999999999999986432 344789998865422 235788999999997 99999
Q ss_pred eeEEccccCcEEEEEEeCC-CCCHHHHHhhCC----------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEE
Q psy3118 67 QIKWCGSEGDYNVMVMELL-GPSLEDLFNFCS----------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMV 129 (227)
Q Consensus 67 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~----------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~ 129 (227)
++++++..++..+++|||+ +++|.+++.... ..+++.++..++.|++ +|+.|++|||||| |++
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 9999999999999999999 999999987631 2367788999999987 9999999999999 888
Q ss_pred EeeccCCCeeeEEeeecccc
Q psy3118 130 VGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~ 149 (227)
+.. .+..++.|||.+..
T Consensus 163 i~~---~~~~~l~dfg~~~~ 179 (296)
T cd05095 163 VGK---NYTIKIADFGMSRN 179 (296)
T ss_pred EcC---CCCEEeccCccccc
Confidence 865 67889999998764
No 259
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.90 E-value=1.8e-23 Score=163.39 Aligned_cols=134 Identities=20% Similarity=0.291 Sum_probs=118.3
Q ss_pred eeecccCcceEEEEEEcCC---CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNIST---GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|+||.||+|.+... +..+|+|.+..... ...+.+|+++++.++ |+|++++++++.+....+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEecc
Confidence 4689999999999998765 88999999866533 346788999999998 999999999999999999999999
Q ss_pred CCCHHHHHhhC--------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 86 GPSLEDLFNFC--------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 86 ~~~L~~~~~~~--------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++|.+++... ...+++.++..++.|++ +|++|++|+|||| |++++. .+..++.|||.+...
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~---~~~~~l~dfg~~~~~ 155 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE---DLVVKISDFGLSRDV 155 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC---CCcEEEccccccccc
Confidence 99999999875 36799999999999998 9999999999999 888877 578999999987644
No 260
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.90 E-value=1.7e-23 Score=163.38 Aligned_cols=137 Identities=23% Similarity=0.326 Sum_probs=118.8
Q ss_pred EEEEeeecccCcceEEEEEEcCCC----cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTG----EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~----~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+++.+.||.|+||.||+|.+..++ ..+|+|....... ...+..|+.+++.++ |+||+++++.+.+.+..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEEE
Confidence 357889999999999999997766 8999999865443 346788999999995 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCC-cCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFCSRR-FSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~-~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||++ +++|.+++...... +++.++..++.|++ +|+.|++|+|||| |++++. .+..+++|||.+..
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~ 152 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE---NLVVKISDFGLSRD 152 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc---CCeEEEcccCCcee
Confidence 9999 99999999874333 99999999999998 9999999999999 888876 56899999997753
No 261
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.90 E-value=3.3e-23 Score=163.95 Aligned_cols=136 Identities=18% Similarity=0.232 Sum_probs=119.2
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
-|++.+.||+|+||.||+|.+..++..+|+|....... ...+.+|+.++++++ |+||+++++++..++..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEEEEe
Confidence 47888999999999999999988999999998754322 235778999999998 99999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+ +++|.+++.. ..+++..+..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+..
T Consensus 84 ~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~---~~~~~l~dfg~~~~ 150 (277)
T cd06641 84 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQ 150 (277)
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC---CCCEEEeeccccee
Confidence 9 8999998874 5789999999999988 9999999999999 888865 57799999997754
No 262
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.90 E-value=1.4e-23 Score=165.75 Aligned_cols=138 Identities=14% Similarity=0.220 Sum_probs=117.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcC-----CCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNIS-----TGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
++|++.+.||+|+||.||+|..+. +.+.+|+|........ ..+.+|++++++++ |+|++++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCCcc
Confidence 679999999999999999999754 3457999987543332 45888999999997 99999999999998999
Q ss_pred EEEEeCC-CCCHHHHHhhCC--------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEe
Q psy3118 79 VMVMELL-GPSLEDLFNFCS--------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIK 143 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~--------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~ 143 (227)
++||||+ +++|.+++.... ..+++..+..++.|++ +|++||+|||||| |+++.. .+...+.+
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~---~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS---QREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC---CCcEEEcc
Confidence 9999999 899999998642 1689999999999998 9999999999999 888866 56677888
Q ss_pred eeccc
Q psy3118 144 LECIK 148 (227)
Q Consensus 144 ~~~~~ 148 (227)
|+.+.
T Consensus 161 ~~~~~ 165 (275)
T cd05046 161 LSLSK 165 (275)
T ss_pred ccccc
Confidence 88664
No 263
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.90 E-value=1.6e-23 Score=166.12 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=120.5
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
-|++.+.||+|+||.||+|.+..++..+|+|...... ....+.+|+++++.+. |+|++++++.+..++..++++||+
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEEEec
Confidence 4688899999999999999999999999999885432 2235778999999997 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++......+++..+..++.|++ +|+.|++|||||| |++++. ++..++.|||.+..
T Consensus 85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~---~~~~kl~dfg~~~~ 152 (282)
T cd06643 85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL---DGDIKLADFGVSAK 152 (282)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc---CCCEEEcccccccc
Confidence 8999888765456799999999999998 9999999999999 888865 67899999997753
No 264
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.90 E-value=1.1e-23 Score=165.68 Aligned_cols=140 Identities=14% Similarity=0.187 Sum_probs=120.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCc---EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGE---EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~---~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
.++|+..+.||+|+||.||+|.+..++. .+|+|.+..... .+.+..|+++++.++ |+|++++.+++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCcE
Confidence 4589999999999999999999876654 799998765422 235778999999997 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|||+ +++|.+++......+++.++..++.|++ +|+.|++|||||| |++++. ++..++.|||.+..
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~---~~~~kl~dfg~~~~ 156 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS---NLECKVSDFGLSRV 156 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC---CCcEEECCCcccee
Confidence 999999 9999999987556799999999999988 9999999999999 888865 67789999997653
No 265
>KOG0574|consensus
Probab=99.90 E-value=3.5e-26 Score=175.09 Aligned_cols=138 Identities=16% Similarity=0.166 Sum_probs=128.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
-|.++..||.|+||.||+|.++.+|..+|||.++.+.+.+.+..|+.+|+.+. .+.+|++|+.+-....+|+||||| .
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEeehhhcCC
Confidence 46778899999999999999999999999999988888888999999999998 899999999999888999999999 8
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||..|+++..+.++++.++..+++..+ +|...-||||||. ||++.. .|..++.|||-+..
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT---~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT---DGIAKLADFGVAGQ 178 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc---cchhhhhhccccch
Confidence 999999998788999999999999888 9999999999999 999987 68899999997653
No 266
>PHA02988 hypothetical protein; Provisional
Probab=99.90 E-value=1.9e-23 Score=165.98 Aligned_cols=180 Identities=16% Similarity=0.024 Sum_probs=131.6
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEcccc----CcEEEEEEe
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSE----GDYNVMVME 83 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~----~~~~~lv~e 83 (227)
..||+|++|.||+|.. +|+.||+|.++..... +.+.+|+.+|++++ ||||+++++++.+ ....+++||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence 6789999999999997 7899999998654322 34668999999998 8999999998766 456899999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc--
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ-- 153 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~-- 153 (227)
|+ +|+|.+++.. ...+++.....++.|++ +|+ .+++|||||| |++++. ++..++.|||.++.....
T Consensus 103 y~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~---~~~~kl~dfg~~~~~~~~~~ 178 (283)
T PHA02988 103 YCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE---NYKLKIICHGLEKILSSPPF 178 (283)
T ss_pred eCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC---CCcEEEcccchHhhhccccc
Confidence 99 9999999987 46789888888888887 897 5999999999 888876 578899999987632211
Q ss_pred hhhHHHHHHhhccCCCCCeeeeccc-cCCeeEEEeeccCCCHHHHHhHcCCCCCHH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGS-EGDYNVMVMELLGPSLEDLFNFCSRRFSLK 208 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~-~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~ 208 (227)
....+..|.. |... .+. .......++|.+|..+++++.+ ..+|.-.
T Consensus 179 ~~~~~~~y~a-------PE~~-~~~~~~~~~k~Di~SlGvil~el~~g-~~Pf~~~ 225 (283)
T PHA02988 179 KNVNFMVYFS-------YKML-NDIFSEYTIKDDIYSLGVVLWEIFTG-KIPFENL 225 (283)
T ss_pred cccCcccccC-------HHHh-hhccccccchhhhhHHHHHHHHHHHC-CCCCCCC
Confidence 0111111111 1110 110 1222345678889999998885 4455433
No 267
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.90 E-value=8.3e-24 Score=167.43 Aligned_cols=140 Identities=20% Similarity=0.292 Sum_probs=119.6
Q ss_pred cCeEEEEeeecccCcceEEEEEEcC-----CCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIS-----TGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|.+.+.||+|+||.||+|.+.. ++..+|+|........ +.+.+|++++++++ |+||+++++++.....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ-HENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC-CCCchheeeEEecCCC
Confidence 3568999999999999999998743 3578999998654332 46888999999998 9999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCC-------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS-------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTG 137 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~-------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~ 137 (227)
.+++|||+ +++|.+++...+ ..+++.++..++.|++ +|++|++|||||| |++++. .+
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~---~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY---DL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC---CC
Confidence 99999999 999999997531 3478889999999988 9999999999999 888876 57
Q ss_pred eeeEEeeecccc
Q psy3118 138 EEVAIKLECIKT 149 (227)
Q Consensus 138 ~~~~~~~~~~~~ 149 (227)
..++.|||.+..
T Consensus 160 ~~kl~d~g~~~~ 171 (280)
T cd05049 160 VVKIGDFGMSRD 171 (280)
T ss_pred eEEECCccccee
Confidence 899999997753
No 268
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.90 E-value=2.2e-23 Score=166.42 Aligned_cols=138 Identities=23% Similarity=0.276 Sum_probs=121.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.++|++.+.||+|+||.||++.+..++..+|+|....... .+.+.+|+.++++++ |||++++++.+..++..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEEEEe
Confidence 4689999999999999999999988999999998754322 245788999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++.. ..+++.++..++.|++ +|++|++|+|||| |+++.. .+..++.|||.+..
T Consensus 97 ~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~---~~~~kL~dfg~~~~ 164 (293)
T cd06647 97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQ 164 (293)
T ss_pred cCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC---CCCEEEccCcceec
Confidence 99 9999999875 4688999999999988 9999999999999 888866 56789999997653
No 269
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.90 E-value=7.6e-24 Score=166.52 Aligned_cols=139 Identities=22% Similarity=0.234 Sum_probs=120.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++|++.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.++ |+||+++++++..++..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEEE
Confidence 468999999999999999999999999999998754321 235778999999997 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+ +++|.++++.. ...+++..+..++.|++ +|++|++|+|||| |++++. ++..++.|||.+..
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~---~~~~~l~dfg~~~~ 155 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRF 155 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCCEEECcchhhhc
Confidence 9999 89999988742 35689999999999988 9999999999999 888865 57799999997653
No 270
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.90 E-value=1.6e-23 Score=164.48 Aligned_cols=139 Identities=17% Similarity=0.159 Sum_probs=122.8
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|+..+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+++++++. |+||+++++.+..++..++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEEE
Confidence 468889999999999999999999999999998865432 235788999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++......+++..+..++.|++ +|+ .|++|+|||| |++++. .+..++.|||.+..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~---~~~~~l~d~g~~~~ 150 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS---RGQIKLCDFGVSGQ 150 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC---CCCEEEeecccchh
Confidence 99 8999999987547789999999999988 999 9999999999 888876 67899999997653
No 271
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.90 E-value=4e-23 Score=161.94 Aligned_cols=139 Identities=20% Similarity=0.211 Sum_probs=124.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|++.+.||+|++|.||+|.+..+++.+|+|....... ...+.+|+..+++++ |+|++++++++..++..+++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEEE
Confidence 468999999999999999999999999999999866533 346888999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|+ +++|.+++.. ...+++..+..++.|++ +|+ .|++|+||+| |+++.. .+...+.||+.+...
T Consensus 80 ~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~---~~~~~l~df~~~~~~ 150 (264)
T cd06623 80 YMDGGSLADLLKK-VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS---KGEVKIADFGISKVL 150 (264)
T ss_pred ecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC---CCCEEEccCccceec
Confidence 99 8999999987 47799999999999998 999 9999999999 888876 678899999976643
No 272
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.90 E-value=4.5e-23 Score=163.58 Aligned_cols=188 Identities=18% Similarity=0.188 Sum_probs=141.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|+..+.||.|++|.||+|.+..+++.+|||.+..... ...+.+|++++++++ |+||+++++++.+++..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998864432 235778999999998 9999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|+.++|.+++... ...+++..+..++.|++ +|+.|++|+||+| |++++. ++..++.|||.+.........
T Consensus 80 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~---~~~~~l~dfg~~~~~~~~~~~ 156 (284)
T cd07860 80 FLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRT 156 (284)
T ss_pred ccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEEeeccchhhcccCccc
Confidence 9977898888764 45789999999999988 9999999999999 998876 577999999976533211100
Q ss_pred HHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 157 ESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 157 e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
+....++... |... .+.......-++|.+|..+++++.+. .+|
T Consensus 157 ----~~~~~~~~~y~aPE~~-~~~~~~~~~~Dv~slG~il~~l~tg~-~p~ 201 (284)
T cd07860 157 ----YTHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLGCIFAEMVTRR-ALF 201 (284)
T ss_pred ----cccccccccccCCeEE-ecCCCCCcHHHHHHHHHHHHHHHHCC-CCC
Confidence 0000111111 2221 22111122356788899999988863 344
No 273
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.90 E-value=3.6e-23 Score=166.05 Aligned_cols=140 Identities=20% Similarity=0.249 Sum_probs=119.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEcccc-------
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSE------- 74 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~------- 74 (227)
-++|++.+.||+|+||.||+|.+..+++.+|+|.+...... ....+|+++++.++ |+||+++++.+.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC-CCCccchhhheecccccccc
Confidence 47899999999999999999999999999999988654322 35678999999998 8999999877643
Q ss_pred -CcEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 75 -GDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 75 -~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
....+++|||++++|.+.+......+++.++..++.|++ +|+.||+|+|||| |+++.. .+..++.||+.+
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~ 162 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN---QGILKIADFGLA 162 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCCEEECcCccc
Confidence 335799999998788888776556799999999999998 9999999999999 998876 678899999977
Q ss_pred cc
Q psy3118 148 KT 149 (227)
Q Consensus 148 ~~ 149 (227)
..
T Consensus 163 ~~ 164 (311)
T cd07866 163 RP 164 (311)
T ss_pred hh
Confidence 53
No 274
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.90 E-value=5.5e-23 Score=163.94 Aligned_cols=140 Identities=21% Similarity=0.304 Sum_probs=119.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcE-----
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY----- 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~----- 77 (227)
++|++.+.||+|+||.||+|.+..+++.||+|....... ...+.+|+.+++.+.+|+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 479999999999999999999999999999998765422 23577899999999878999999988876554
Q ss_pred EEEEEeCCCCCHHHHHhhC----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 78 NVMVMELLGPSLEDLFNFC----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
.|++|||+.++|.+++... ...+++..+..++.|++ +|++||+|||||| |++++.+ .+..++.|||.+
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~--~~~~kl~dfg~~ 158 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ--KGLLKIADLGLG 158 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC--CCeEEEeecccc
Confidence 8999999966899888653 23589999999999998 9999999999999 9988764 567899999976
Q ss_pred c
Q psy3118 148 K 148 (227)
Q Consensus 148 ~ 148 (227)
.
T Consensus 159 ~ 159 (295)
T cd07837 159 R 159 (295)
T ss_pred e
Confidence 5
No 275
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.90 E-value=4.3e-23 Score=162.62 Aligned_cols=137 Identities=18% Similarity=0.196 Sum_probs=114.3
Q ss_pred CeEEEEeee--cccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 7 NKYRLGRKI--GSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 7 ~~y~~~~~l--g~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
++|++.+.+ |+|+||.||++.++.++..+|+|........ ..|..+...+.+|+|++++++.+..++..++||||
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~ 90 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDY 90 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEc
Confidence 456776666 9999999999999999999999998553222 12444444455699999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+ +++|.++++. ...+++.++..++.|++ +|+.|++|||||| |+++..+ .+..++.|||.+..
T Consensus 91 ~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~~~ 159 (267)
T PHA03390 91 IKDGDLFDLLKK-EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLCKI 159 (267)
T ss_pred CCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCcccee
Confidence 9 9999999987 35899999999999998 9999999999999 8888764 33789999997754
No 276
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.90 E-value=4.4e-23 Score=164.58 Aligned_cols=191 Identities=15% Similarity=0.127 Sum_probs=139.0
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++|++.+.||+|++|.||+|.+..+++.+|+|.+..... ...+.+|++++++++ |+|++++++++.+++..++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999998999999998754322 235778999999997 999999999999999999999
Q ss_pred eCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
||++++|.+.+... ...+++..+..++.|++ +|++|++|||||| |++++.+ .+..++.|||.+........
T Consensus 81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~--~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR--TNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECC--CCEEEEcccccccccCCCcc
Confidence 99977888887653 23467888888888888 9999999999999 8888753 45688999997753221100
Q ss_pred hHHHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 156 IESKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.+....++... |.-...+........++|.+|..+++++.+. .+|
T Consensus 159 ----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~-~pf 204 (294)
T PLN00009 159 ----TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK-PLF 204 (294)
T ss_pred ----ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC-CCC
Confidence 00000111110 1100111111122356788899999998864 344
No 277
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.90 E-value=2e-23 Score=166.79 Aligned_cols=195 Identities=18% Similarity=0.239 Sum_probs=128.9
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCC---CcEEEEEEeeecCCCCchhhHH---------------HHHHHhcCCCC
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNIST---GEEVAIKLECIKTRHPQLHIES---------------KIYKLMQGGVG 64 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~~~~~~E~---------------~~l~~l~~~~~ 64 (227)
...+++|++.+.||+|+||.||+|.+..+ +..+|+|....... ....|. ..+..+. |++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~ 84 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE--TIVMETLVYNNIYDIDKIALWKNIHNID-HLG 84 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC--chhhHHHHHHhhhhHHHHHHHHHhccCC-CCC
Confidence 45678999999999999999999998777 66788887543322 111222 2233344 899
Q ss_pred CCeeEEccccCc----EEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeecc
Q psy3118 65 IPQIKWCGSEGD----YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNI 134 (227)
Q Consensus 65 i~~~~~~~~~~~----~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~ 134 (227)
++++++++.... ..++++|++..++.+++.. ....++..+..++.|++ +|++||+|||||| |++++.
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~-- 161 (294)
T PHA02882 85 IPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG-- 161 (294)
T ss_pred CCcEEEeeeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--
Confidence 999998766543 4688999987788888776 34578888899999998 9999999999999 988865
Q ss_pred CCCeeeEEeeeccccCCCchh-h--HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 135 STGEEVAIKLECIKTRHPQLH-I--ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-~--e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
.+..++.|||.++....... . .........|++....+............++|.+|..++++..+ ..+|
T Consensus 162 -~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g-~~P~ 233 (294)
T PHA02882 162 -NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI-KLPW 233 (294)
T ss_pred -CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCC
Confidence 56789999998764321100 0 00000111233222111111111122235678889988888875 4555
No 278
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.90 E-value=2.5e-23 Score=162.60 Aligned_cols=138 Identities=20% Similarity=0.254 Sum_probs=119.3
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.+|++.+.||+|+||.||+|.+. .+..+|+|.+..... ...+.+|+++++.++ |++++++++++......+++|||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEEEEcC
Confidence 47999999999999999999875 467899998764432 346888999999998 999999999999989999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++......+++..+..++.|++ +|+.|++|+|||| |++++. ++..++.||+.+..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~---~~~~~l~d~g~~~~ 149 (256)
T cd05112 82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE---NQVVKVSDFGMTRF 149 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC---CCeEEECCCcceee
Confidence 9999999987556789999999998887 9999999999999 888865 67789999997653
No 279
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.90 E-value=5.7e-23 Score=163.67 Aligned_cols=142 Identities=17% Similarity=0.221 Sum_probs=120.7
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccC-----cEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEG-----DYN 78 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~-----~~~ 78 (227)
..++|.+.+.||+|+||.||+|.+..+++.+|+|....... ...+.+|+.+++++.+|+|++++++++... +..
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 35789999999999999999999999999999999855322 245778999999996699999999887643 468
Q ss_pred EEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 79 VMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
++||||+ +++|.++++.. ...+++..+..++.|++ +|+.|++|||||| |+++.. .+..++.|||.+.
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~---~~~~kl~dfg~~~ 176 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVSA 176 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC---CCCEEEeecccch
Confidence 9999999 99999988642 45789999999999988 9999999999999 888866 5678999999765
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 177 ~ 177 (291)
T cd06639 177 Q 177 (291)
T ss_pred h
Confidence 4
No 280
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.90 E-value=6.9e-23 Score=164.53 Aligned_cols=184 Identities=17% Similarity=0.189 Sum_probs=140.1
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
...+|+..+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+++++.++ |||++++.+++.+++..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEE
Confidence 456799999999999999999999889999999988543221 35778999999998 999999999999999999
Q ss_pred EEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 80 MVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 80 lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+||||+.++|.+++......+++.++..++.|++ +|+.||+||||+| |++++. .+..++.|||.+....+.
T Consensus 92 lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~---~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 92 LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE---PGTVKLADFGSASLVSPA 168 (307)
T ss_pred EEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC---CCCEEEeecCcceecCCC
Confidence 9999998888888876556799999999999998 8999999999999 888876 578999999977643322
Q ss_pred hhhHHHHHHhhccCCCC--Ceeeec-cccCCeeEEEeeccCCCHHHHHhH
Q psy3118 154 LHIESKIYKLMQGGVGI--PQIKWC-GSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~--p~~~~~-g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.. ..++... |..... +........++|.+|..+++++.+
T Consensus 169 ~~--------~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg 210 (307)
T cd06607 169 NS--------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210 (307)
T ss_pred CC--------ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcC
Confidence 10 0111111 221110 111112245667788888887765
No 281
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90 E-value=2.6e-23 Score=155.39 Aligned_cols=129 Identities=19% Similarity=0.149 Sum_probs=97.8
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----------CCch-----------------hhHHHHHHHhcCCC
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----------HPQL-----------------HIESKIYKLMQGGV 63 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----------~~~~-----------------~~E~~~l~~l~~~~ 63 (227)
...||+|+||.||+|.+. +|++||+|+++.... ..++ .+|.++++++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 467999999999999986 899999999865421 1122 23999999997 66
Q ss_pred CCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----c-cccceeccCCee-eEEEeeccC
Q psy3118 64 GIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----I-TAPGIIDQEQKS-VMVVGTNIS 135 (227)
Q Consensus 64 ~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----l-h~~~iiHrDlkp-ni~l~~~~~ 135 (227)
+++......... .++||||+ |+++...... ...++..++..++.|++ + |+.||+|||||| |++++
T Consensus 80 ~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~---- 152 (190)
T cd05147 80 GIPCPEPILLKS--HVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH---- 152 (190)
T ss_pred CCCCCcEEEecC--CEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----
Confidence 664433222222 38999999 6666544333 46799999999999987 6 799999999999 98886
Q ss_pred CCeeeEEeeecccc
Q psy3118 136 TGEEVAIKLECIKT 149 (227)
Q Consensus 136 ~~~~~~~~~~~~~~ 149 (227)
+++.+++|||.+..
T Consensus 153 ~~~v~LiDFG~a~~ 166 (190)
T cd05147 153 DGKLYIIDVSQSVE 166 (190)
T ss_pred CCcEEEEEcccccc
Confidence 36799999998874
No 282
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.90 E-value=1.3e-23 Score=166.81 Aligned_cols=138 Identities=17% Similarity=0.175 Sum_probs=121.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.++|++.+.||+|+||+||++.+..+++.+|+|+...... ...+.+|+++++.++ |+||+++++.+...+..++||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEEE
Confidence 3679999999999999999999999999999998765432 236788999999997 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
||+ +++|.++++. .+.+++..+..++.|++ +|+ .|++|||||| |+++.. .+...+.|||.+.
T Consensus 83 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~~~l~d~gl~~ 152 (284)
T cd06620 83 EFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS---RGQIKLCDFGVSG 152 (284)
T ss_pred ecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC---CCcEEEccCCccc
Confidence 999 9999999887 46789999999999987 886 6999999999 988875 5779999999764
No 283
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.90 E-value=1.9e-23 Score=169.29 Aligned_cols=192 Identities=15% Similarity=0.139 Sum_probs=141.4
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCc-----EE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD-----YN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-----~~ 78 (227)
||++.+.||+|+||.||+|.+..++..+|+|.+.... ..+.+.+|+.+++.++ |+||+++.+++...+ ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccce
Confidence 6899999999999999999998899999999886532 2346888999999998 999999999887765 78
Q ss_pred EEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 79 VMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
|++|||++++|.+++.. ...+++..+..++.|++ +|+.||+|+|||| |++++. .+..++.|||.+.....
T Consensus 80 ~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~---~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 80 YIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS---NCDLKICDFGLARGVDP 155 (330)
T ss_pred EEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEcccCceEeecc
Confidence 99999997799998876 45899999999999998 9999999999999 988876 57899999998764432
Q ss_pred chhhHHHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 153 QLHIESKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
..... .......++... +.-...+........++|.+|..+++++.+. .+|.
T Consensus 156 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~-~pf~ 208 (330)
T cd07834 156 DEDEK-GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK-PLFP 208 (330)
T ss_pred ccccc-ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCC-CCcC
Confidence 21000 000000111111 1111112212223456788888888888763 3443
No 284
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.90 E-value=2.6e-23 Score=165.54 Aligned_cols=141 Identities=18% Similarity=0.227 Sum_probs=116.0
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcC-----CCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCc
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNIS-----TGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGD 76 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 76 (227)
..++|++.+.||+|+||.||+|..+. .+..||+|.+...... ..+.+|+.+++.++ |+||+++++.+.+++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~ 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT-CHHVVRLLGVVSKGQ 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCC
Confidence 35789999999999999999997642 3458999987543221 24677999999997 999999999999989
Q ss_pred EEEEEEeCC-CCCHHHHHhhCC---------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeee
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCS---------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEV 140 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~---------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~ 140 (227)
..+++|||+ +++|.++++... ...+...+..++.|++ +|++||+|||||| |++++. ++..+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~---~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC---CCcEE
Confidence 999999999 999999997531 2346677888888887 9999999999999 888875 67789
Q ss_pred EEeeecccc
Q psy3118 141 AIKLECIKT 149 (227)
Q Consensus 141 ~~~~~~~~~ 149 (227)
+.|||.++.
T Consensus 160 L~Dfg~~~~ 168 (288)
T cd05061 160 IGDFGMTRD 168 (288)
T ss_pred ECcCCcccc
Confidence 999997753
No 285
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.90 E-value=2.5e-23 Score=163.00 Aligned_cols=131 Identities=18% Similarity=0.235 Sum_probs=110.3
Q ss_pred eecccCcceEEEEEEc--CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CC
Q psy3118 14 KIGSGSFGDIYLGTNI--STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GP 87 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 87 (227)
.||+|+||.||+|.+. ..+..+|+|+....... +.+.+|+.++++++ |+||+++++++.. +..++||||+ ++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~-~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD-NPYIVRMIGVCEA-EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence 4899999999999764 34567999988654322 35788999999997 9999999998764 4679999999 99
Q ss_pred CHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 88 SLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 88 ~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+|.+++......+++.+++.++.|++ +|++|++|||||| |++++. ++..++.|||.+..
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~---~~~~kl~dfg~~~~ 144 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN---QHYAKISDFGLSKA 144 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC---CCcEEeccCCcccc
Confidence 99999876556799999999999998 9999999999999 888865 57789999997753
No 286
>KOG0696|consensus
Probab=99.90 E-value=1.6e-24 Score=172.12 Aligned_cols=193 Identities=19% Similarity=0.205 Sum_probs=144.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec-----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
..+|..+.+||+|+||.|.+|..+.+.+.+|||+++++ .+.+....|.++|......|.+++++.++++.+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 45789999999999999999999999999999998765 3334567899999988888999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||||+ ||+|.--++. -+++-++.+..++.+|+ ||++|||.||||. |++++. .|.+++.|||..+..--
T Consensus 428 VMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~---eGHiKi~DFGmcKEni~- 502 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIF- 502 (683)
T ss_pred EEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc---CCceEeeeccccccccc-
Confidence 99999 9999988887 46788888877777776 9999999999999 999987 79999999998764211
Q ss_pred hhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHH
Q psy3118 154 LHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKT 209 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~ 209 (227)
+....+...|+|.+ |.+..+.+.+ ....-|.+|.-|+|+..+ ..+|+...
T Consensus 503 ---~~~TTkTFCGTPdYiAPEIi~YqPYg--ksvDWWa~GVLLyEmlaG-QpPFdGeD 554 (683)
T KOG0696|consen 503 ---DGVTTKTFCGTPDYIAPEIIAYQPYG--KSVDWWAFGVLLYEMLAG-QPPFDGED 554 (683)
T ss_pred ---CCcceeeecCCCcccccceEEecccc--cchhHHHHHHHHHHHHcC-CCCCCCCC
Confidence 11112334566543 3333322222 122335556666665554 34454433
No 287
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.90 E-value=1.8e-23 Score=164.88 Aligned_cols=138 Identities=12% Similarity=0.210 Sum_probs=111.4
Q ss_pred EEEEeeecccCcceEEEEEEcCCCc--EEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEcccc------Cc
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGE--EVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSE------GD 76 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~--~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~------~~ 76 (227)
+.+++.||+|+||.||+|.+..++. .+|+|..+... ....+.+|+++++.++ |+||+++++.+.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCCC
Confidence 3577899999999999999877665 68999875432 2235778999999997 9999999876532 23
Q ss_pred EEEEEEeCC-CCCHHHHHhhC-----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 77 YNVMVMELL-GPSLEDLFNFC-----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
..+++|||+ +++|.+++... ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE---NMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC---CCCEEECCC
Confidence 478999999 99999887431 23588999999999988 9999999999999 888865 577899999
Q ss_pred eccccC
Q psy3118 145 ECIKTR 150 (227)
Q Consensus 145 ~~~~~~ 150 (227)
|.+...
T Consensus 157 g~~~~~ 162 (272)
T cd05075 157 GLSKKI 162 (272)
T ss_pred Cccccc
Confidence 987643
No 288
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.90 E-value=2e-23 Score=166.10 Aligned_cols=140 Identities=19% Similarity=0.260 Sum_probs=118.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
..+|.+.+.||+|+||.||++.+. .++..+|+|....... ...+.+|++++++++ |+|++++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDPL 82 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcc
Confidence 357999999999999999999852 3455789998754322 235888999999998 89999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCC------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCee
Q psy3118 79 VMVMELL-GPSLEDLFNFCS------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
+++|||+ +++|.+++.... ..+++.++..++.|++ +|++|++|||||| |++++. .+..
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~---~~~~ 159 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE---NLLV 159 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc---CCcE
Confidence 9999999 999999987532 2489999999999998 8999999999999 888865 6788
Q ss_pred eEEeeecccc
Q psy3118 140 VAIKLECIKT 149 (227)
Q Consensus 140 ~~~~~~~~~~ 149 (227)
++.|||.+..
T Consensus 160 kl~dfg~~~~ 169 (288)
T cd05093 160 KIGDFGMSRD 169 (288)
T ss_pred EeccCCcccc
Confidence 9999997763
No 289
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.90 E-value=2.7e-23 Score=169.09 Aligned_cols=187 Identities=17% Similarity=0.151 Sum_probs=138.7
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccC-----
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEG----- 75 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~----- 75 (227)
+.++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREAF 81 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC-CCCccchHHheeccccccc
Confidence 5789999999999999999999999999999999876431 1235677999999997 99999998877543
Q ss_pred cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 76 DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 76 ~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
...++++||++++|.+++.. ...+++..+..++.|++ +|++|++|||||| |++++. .+..++.|||.+..
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~---~~~~kL~Dfg~~~~ 157 (337)
T cd07858 82 NDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLART 157 (337)
T ss_pred CcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC---CCCEEECcCccccc
Confidence 34899999998899998886 46799999999999998 9999999999999 988876 57899999998764
Q ss_pred CCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 150 RHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 150 ~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
........ ....++... |.... +........++|.+|..+++++.+.
T Consensus 158 ~~~~~~~~----~~~~~~~~y~aPE~~~-~~~~~~~~~DiwslG~il~~l~~g~ 206 (337)
T cd07858 158 TSEKGDFM----TEYVVTRWYRAPELLL-NCSEYTTAIDVWSVGCIFAELLGRK 206 (337)
T ss_pred cCCCcccc----cccccccCccChHHHh-cCCCCCCcccHHHHHHHHHHHHcCC
Confidence 32211100 000111110 11110 1011222356788898888888653
No 290
>KOG0587|consensus
Probab=99.90 E-value=7.8e-23 Score=174.76 Aligned_cols=140 Identities=19% Similarity=0.308 Sum_probs=124.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-CchhhHHHHHHHhcCCCCCCeeEEcccc-----CcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-PQLHIESKIYKLMQGGVGIPQIKWCGSE-----GDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~E~~~l~~l~~~~~i~~~~~~~~~-----~~~~~ 79 (227)
.+-|++.+.+|+|.+|.||++.++.+++.+|+|+...+.+. +....|.++++.+.+|||++.+|+++.. ++.+|
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 35699999999999999999999999999999998776554 4678899999999999999999988863 56799
Q ss_pred EEEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 80 MVMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|||||| |||..|+++.. +.++.|..+..|++.++ +|.+.+||||||- |+++.. .++++++|||.+.
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~---e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE---NAEVKLVDFGVSA 171 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec---cCcEEEeeeeeee
Confidence 999999 99999999876 67899999999999988 8999999999999 777766 7899999999764
No 291
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.90 E-value=2.6e-23 Score=164.86 Aligned_cols=141 Identities=18% Similarity=0.283 Sum_probs=121.0
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCCCCCCeeEEcccc------CcEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGGVGIPQIKWCGSE------GDYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~------~~~~ 78 (227)
.++|++.+.||+|+||.||+|.+..+++.+|+|...... ....+..|+.+++++.+|+|++++++++.. .+..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 468999999999999999999999999999999986543 334678899999999779999999988753 4678
Q ss_pred EEEEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 79 VMVMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|||+ +++|.+++... ...+++..+..++.|++ +|+.||+|+|||| |+++.. .+..++.|||.+..
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~---~~~~~l~dfg~~~~ 170 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE---NAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEeeCcchhh
Confidence 9999999 88999999864 34688888888888888 9999999999999 988876 57799999997653
No 292
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.90 E-value=1.1e-22 Score=157.91 Aligned_cols=140 Identities=25% Similarity=0.362 Sum_probs=124.3
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
+|.+.+.||+|++|.||++.+..+++.+++|...... ....+.+|+++++.++ |++++++.+++..++..++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEecC
Confidence 4889999999999999999998899999999986654 3356888999999998 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
+++|.+++......+++..+..++.|++ +|++|++|+||+| |+++.. ++..+++||+.+....
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~~ 149 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLS 149 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc---CCeEEEeecccccccc
Confidence 8999999987446799999999999988 9999999999999 888876 6789999999776443
No 293
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.90 E-value=2.1e-23 Score=165.30 Aligned_cols=140 Identities=21% Similarity=0.296 Sum_probs=120.4
Q ss_pred CeEEEEeeecccCcceEEEEEEc----CCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEcccc--CcE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNI----STGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSE--GDY 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~----~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~~~ 77 (227)
..|++.+.||+|+||.||+|... .++..+|+|....... ...+.+|+++++.++ |+||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD-HENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC-CCChheEEeeeecCCCCc
Confidence 46888999999999999999864 3478999999865544 346888999999997 9999999988776 567
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.+++|||+ +++|.+++......+++.++..++.|++ +|++|++|+|||| |++++. .+..++.|||.+...
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~~ 159 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES---EDLVKISDFGLAKVL 159 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC---CCCEEEccccccccc
Confidence 89999999 9999999987555699999999999988 9999999999999 998876 578999999977644
No 294
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.90 E-value=4.7e-23 Score=164.88 Aligned_cols=193 Identities=19% Similarity=0.208 Sum_probs=140.7
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCc----
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGD---- 76 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---- 76 (227)
..++|++.+.||+|+||.||+|.+..+++.||+|.++..... ..+.+|+++++.++ |||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhhh
Confidence 356899999999999999999999999999999998654322 24677999999997 999999998877654
Q ss_pred ------EEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 77 ------YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 77 ------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
..++++||++++|.+.+......+++.++..++.|++ +|+.||+|+|||| |++++. .+..++.||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~---~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN---KGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---CCcEEeCcc
Confidence 7899999997688888876445799999999999998 9999999999999 988866 678999999
Q ss_pred eccccCCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 145 ECIKTRHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 145 ~~~~~~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
|.+......... .+....+.... |... .+........++|.+|..+++++.+ ..+|.
T Consensus 161 g~~~~~~~~~~~---~~~~~~~~~~y~~PE~~-~~~~~~~~~~Di~slG~~~~el~~g-~~~~~ 219 (302)
T cd07864 161 GLARLYNSEESR---PYTNKVITLWYRPPELL-LGEERYGPAIDVWSCGCILGELFTK-KPIFQ 219 (302)
T ss_pred cccccccCCccc---ccccceeccCccChHHh-cCCCCCCchhHHHHHHHHHHHHHhC-CCCCC
Confidence 977643221110 00000000000 1111 1111112235678889999998875 34554
No 295
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.90 E-value=2.7e-23 Score=163.64 Aligned_cols=137 Identities=22% Similarity=0.263 Sum_probs=116.9
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
.....||+|+||.||+|.+..++..+|+|....... ...+.+|+.+++.++ |+||+++++++..++..++++||+ +
T Consensus 11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred CceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecCCC
Confidence 345689999999999999988999999998765432 246788999999998 999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCc--CHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRF--SLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~--~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+++......+ ++..+..++.|++ +|++||+|||||| |++++.+ .+..++.|||.+..
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~--~~~~~l~dfg~~~~ 158 (268)
T cd06624 90 GSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY--SGVVKISDFGTSKR 158 (268)
T ss_pred CCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCeEEEecchhhee
Confidence 99999988643445 7888888888888 9999999999999 9988654 46789999997653
No 296
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.89 E-value=7.7e-24 Score=165.93 Aligned_cols=179 Identities=16% Similarity=0.121 Sum_probs=128.8
Q ss_pred eeecccCcceEEEEEEcCCCc-------EEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 13 RKIGSGSFGDIYLGTNISTGE-------EVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~-------~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+.||+|+||.||+|.+...+. .+|+|....... .+.+..|+.+++.+. |||++++++++..++..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEEEEe
Confidence 468999999999999865443 488888754332 245777999999997 9999999999998888999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC-----CCeeeEEeeeccccCC
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS-----TGEEVAIKLECIKTRH 151 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~-----~~~~~~~~~~~~~~~~ 151 (227)
|+ +++|.+++......+++..++.++.|++ +|++||+|||||| |++++.+.. .+...+.|||.+....
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99 9999999987555789999999999998 9999999999999 988876422 1235788888765433
Q ss_pred CchhhHHHHHHhhccCCCC-CeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 152 PQLHIESKIYKLMQGGVGI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
+.. ...++.+. +.-.+.+........++|.+|..+++++.+
T Consensus 160 ~~~--------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 160 PKE--------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred Cch--------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence 211 11122211 111111111122235678888888888765
No 297
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.89 E-value=4.7e-23 Score=162.40 Aligned_cols=139 Identities=22% Similarity=0.254 Sum_probs=117.1
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC---CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST---GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
.++|.+.+.||+|+||.||+|.+... ...+|+|....... .+.+.+|+.+++.+. |+||+++++++.+. ..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~-~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD-HPHIVKLIGVITEN-PVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC-CCchhceeEEEcCC-CcE
Confidence 46799999999999999999987544 34689998754332 236788999999998 99999999987754 468
Q ss_pred EEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 80 MVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|||+ +++|.+++......+++..+..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+..
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~---~~~~~l~d~g~~~~ 156 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS---PDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec---CCCeEEccCceeee
Confidence 999999 9999999987555689999999999988 9999999999999 888876 57799999997764
No 298
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.89 E-value=5.9e-23 Score=161.82 Aligned_cols=138 Identities=14% Similarity=0.237 Sum_probs=113.7
Q ss_pred EEEEeeecccCcceEEEEEEcCC---CcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCc-----
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNIST---GEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGD----- 76 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~----- 76 (227)
|++.+.||+|+||.||+|.+..+ +..+|+|.+...... ..+.+|+++++.++ |+||+++++.+....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCccccC
Confidence 57889999999999999987653 478999988654222 35788999999998 999999998776544
Q ss_pred -EEEEEEeCC-CCCHHHHHhhC-----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEe
Q psy3118 77 -YNVMVMELL-GPSLEDLFNFC-----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIK 143 (227)
Q Consensus 77 -~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~ 143 (227)
..+++|||+ +++|.+++... ...+++..+..++.|++ +|++|++|||||| |++++. ++..++.|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE---DMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC---CCeEEECC
Confidence 379999999 99999888542 23689999999999988 9999999999999 888865 57889999
Q ss_pred eeccccC
Q psy3118 144 LECIKTR 150 (227)
Q Consensus 144 ~~~~~~~ 150 (227)
||.++..
T Consensus 157 fg~~~~~ 163 (273)
T cd05035 157 FGLSKKI 163 (273)
T ss_pred ccceeec
Confidence 9987643
No 299
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.89 E-value=4.7e-23 Score=161.62 Aligned_cols=138 Identities=23% Similarity=0.275 Sum_probs=115.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.++|.+.+.||+|+||.||+|.+..+ ..+|+|....... ...+.+|+.+++.++ |+|++++++++.. +..+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLR-HDKLVPLYAVVSE-EPIYIVTEF 81 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCC-CCCeeeEEEEEcC-CCcEEEEEc
Confidence 46899999999999999999987544 4699998755332 246788999999998 9999999888754 557999999
Q ss_pred C-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 85 L-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 85 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+ +++|.+++... ...+++..+..++.|++ +|+.|++|+|||| |++++. .+..++.|||.+..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~---~~~~~l~dfg~~~~ 151 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD---NLVCKIADFGLARL 151 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC---CCeEEECCCccceE
Confidence 9 88999999764 34588999999999988 9999999999999 888876 67789999997753
No 300
>KOG0670|consensus
Probab=99.89 E-value=1.1e-23 Score=171.30 Aligned_cols=201 Identities=18% Similarity=0.180 Sum_probs=156.1
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcC-----CCCCCeeEEccccCcE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQG-----GVGIPQIKWCGSEGDY 77 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~~~ 77 (227)
.+.++|.+....|+|-|+.|.+|.+...|..||||++..+.. ...-.+|++||++|+. .-++++++..|...++
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 457899999999999999999999999999999999977643 3455779999999973 2478899999999999
Q ss_pred EEEEEeCCCCCHHHHHhhCC--CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 78 NVMVMELLGPSLEDLFNFCS--RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++||+|.+..+|.+++++.+ -.+....+..++.|++ |-..||+|.|||| ||++..+ ..-.+++|||.+..
T Consensus 509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~--k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNES--KNILKLCDFGSASF 586 (752)
T ss_pred eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccC--cceeeeccCccccc
Confidence 99999999999999999873 4688999999999988 7789999999999 8888775 56789999998864
Q ss_pred CCC---chhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC---CHHHHHHHHHH
Q psy3118 150 RHP---QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF---SLKTVLLLADQ 216 (227)
Q Consensus 150 ~~~---~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f---~~~~~l~l~~q 216 (227)
... ...+-+.+|..++=..|+|- .+-+.+|..|+.|+|||.+- --| +-..++.+...
T Consensus 587 ~~eneitPYLVSRFYRaPEIiLG~~y---------d~~iD~WSvgctLYElYtGk-IlFpG~TNN~MLrl~me 649 (752)
T KOG0670|consen 587 ASENEITPYLVSRFYRAPEIILGLPY---------DYPIDTWSVGCTLYELYTGK-ILFPGRTNNQMLRLFME 649 (752)
T ss_pred cccccccHHHHHHhccCcceeecCcc---------cCCccceeeceeeEEeeccc-eecCCCCcHHHHHHHHH
Confidence 433 23456677777554443221 12366788888888887762 111 23355555543
No 301
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.89 E-value=3.4e-23 Score=163.28 Aligned_cols=133 Identities=17% Similarity=0.195 Sum_probs=111.7
Q ss_pred eeecccCcceEEEEEEcCCCc--EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGE--EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~--~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..++. .+|+|....... ...+.+|+++++++.+||||+++++++...+..+++|||+ +
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999887775 468887753221 2357789999999977999999999999999999999999 9
Q ss_pred CCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeee
Q psy3118 87 PSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLE 145 (227)
Q Consensus 87 ~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~ 145 (227)
++|.+++.... ..+++.++..++.|++ +|++|++|||||| |++++. .+..++.|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~---~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE---NYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC---CCeEEECCCC
Confidence 99999987531 2478899999999988 9999999999999 888765 5778999999
Q ss_pred ccc
Q psy3118 146 CIK 148 (227)
Q Consensus 146 ~~~ 148 (227)
.+.
T Consensus 158 l~~ 160 (270)
T cd05047 158 LSR 160 (270)
T ss_pred Ccc
Confidence 764
No 302
>KOG1026|consensus
Probab=99.89 E-value=8e-24 Score=180.66 Aligned_cols=197 Identities=19% Similarity=0.283 Sum_probs=150.9
Q ss_pred CeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
.+-++.+.||+|+||+||+|.-. .....||||.++.+... ..|+||++++..|+ |||||++++.+..++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ-HPNIVRLLGVCREGDPL 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEccCCee
Confidence 34577889999999999999853 23357999998765443 47999999999999 99999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCC---------C----CcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCe
Q psy3118 79 VMVMELL-GPSLEDLFNFCS---------R----RFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGE 138 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~---------~----~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~ 138 (227)
++|+||+ .|+|.++|+... . +++..+.+.|+.||+ |-++.+|||||.. |.+++. .-.
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge---~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE---NLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceecc---ceE
Confidence 9999999 999999998531 1 288999999999999 7899999999999 999987 566
Q ss_pred eeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCC----ee-EEEeeccCCCHHHHHhHcCCCC---CHHHH
Q psy3118 139 EVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD----YN-VMVMELLGPSLEDLFNFCSRRF---SLKTV 210 (227)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~----~~-~~vm~~lg~~l~~l~~~~~~~f---~~~~~ 210 (227)
+++.|||+++.. ..+..|+....+ .-.+=|..++.. +. --+.|.+|..|||+|+.-..++ +=.++
T Consensus 642 VKIsDfGLsRdi-----YssDYYk~~~~t--~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV 714 (774)
T KOG1026|consen 642 VKISDFGLSRDI-----YSSDYYKVRGNT--LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV 714 (774)
T ss_pred EEecccccchhh-----hhhhhhcccCCc--eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence 899999999843 244455543222 234455544422 11 3457999999999998854333 44455
Q ss_pred HHHH
Q psy3118 211 LLLA 214 (227)
Q Consensus 211 l~l~ 214 (227)
...+
T Consensus 715 Ie~i 718 (774)
T KOG1026|consen 715 IECI 718 (774)
T ss_pred HHHH
Confidence 5444
No 303
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.89 E-value=2.7e-23 Score=162.97 Aligned_cols=133 Identities=16% Similarity=0.166 Sum_probs=108.2
Q ss_pred eeecccCcceEEEEEEcC---CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccc-cCcEEEEEEeCC
Q psy3118 13 RKIGSGSFGDIYLGTNIS---TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGS-EGDYNVMVMELL 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~ 85 (227)
+.||+|+||.||+|.+.. .+..+|+|....... ...+.+|+.+++.++ |||++++++++. .++..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEecC
Confidence 468999999999998653 345799998754222 235778999999997 999999998654 455689999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++.......++..+..++.|++ +|+.|++|||||| |++++. .+..++.|||.+..
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~---~~~~kl~dfg~~~~ 147 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE---SFTVKVADFGLARD 147 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC---CCcEEECCcccccc
Confidence 9999999987555678888888888887 9999999999999 888865 56789999997753
No 304
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.89 E-value=1.1e-22 Score=158.49 Aligned_cols=138 Identities=22% Similarity=0.304 Sum_probs=122.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|++|.||++.+..+++.+|+|....... .+.+.+|++++++++ |+|++++.+++.+++..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEEe
Confidence 58999999999999999999988999999999865532 235788999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
++ +++|.+++.. ...+++..+..++.|++ +|+.||+|+|||| |+++.. .+..++.||+.+...
T Consensus 80 ~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~~l~d~~~~~~~ 149 (254)
T cd06627 80 YAENGSLRQIIKK-FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK---DGVVKLADFGVATKL 149 (254)
T ss_pred cCCCCcHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC---CCCEEEeccccceec
Confidence 99 8999999987 46799999999999998 8999999999999 888876 678999999977643
No 305
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.89 E-value=3.6e-23 Score=163.57 Aligned_cols=138 Identities=21% Similarity=0.308 Sum_probs=121.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhc--CCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
.|+..+.||+|+||.||+|.+..+++.+|+|.++.+.. ...+.+|+.+++.+. .|+|++++++++..+...+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 57889999999999999999999999999999865422 235778999999997 4899999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
||+ +++|.++++. ..+++..+..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+...
T Consensus 82 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~---~~~~~l~dfg~~~~~ 151 (277)
T cd06917 82 EYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN---TGNVKLCDFGVAALL 151 (277)
T ss_pred ecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC---CCCEEEccCCceeec
Confidence 999 9999999875 4789999999999988 9999999999999 988876 678999999977543
No 306
>KOG4645|consensus
Probab=99.89 E-value=1.5e-24 Score=191.45 Aligned_cols=189 Identities=19% Similarity=0.192 Sum_probs=143.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
.-||+-+..||.|.||.||.|.+..+|...|+|-+.... ..+.+.+|..++..++ |||+|+.|+.-..++..+|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc-CccccccCceeecHHHHHHH
Confidence 458999999999999999999999999999999765432 2346888999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
|||| ||+|.+++.. ++..++.....+..|++ ||+.||||||||| ||+++. .|-.+..|||.+....+..
T Consensus 1313 MEyC~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~---~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF---NGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec---CCcEEeecccceeEecCch
Confidence 9999 9999999998 56677777788888888 9999999999999 888887 6789999999887544332
Q ss_pred -hhHHHHHHhhccCCCCCee-eeccc--cCCeeEEEeeccCCCHHHHHhH
Q psy3118 155 -HIESKIYKLMQGGVGIPQI-KWCGS--EGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 155 -~~e~~~y~~l~g~~g~p~~-~~~g~--~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
+.. .....+-||+-+..+ ...|. .+...+.++|.+|+..-|+..+
T Consensus 1389 ~~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tG 1437 (1509)
T KOG4645|consen 1389 QTMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATG 1437 (1509)
T ss_pred hcCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecC
Confidence 111 111223344422221 22232 3444466667777665555544
No 307
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.89 E-value=1.3e-23 Score=166.74 Aligned_cols=139 Identities=14% Similarity=0.189 Sum_probs=116.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCC-----CcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNIST-----GEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~-----~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
.+|.+.+.||+|+||.||+|.+..+ +..+|+|..+..... ..+.+|+.++..++ ||||+++++.+.+.+..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCCce
Confidence 3578889999999999999987543 468999998644322 35778999999998 99999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhC---------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCC
Q psy3118 79 VMVMELL-GPSLEDLFNFC---------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIST 136 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~ 136 (227)
++++||+ +++|.+++... ...+++..+..++.|++ +|++||+|||||| |+++.. .
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~---~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD---K 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC---C
Confidence 9999999 99999998531 13578888899999988 9999999999999 888865 5
Q ss_pred CeeeEEeeecccc
Q psy3118 137 GEEVAIKLECIKT 149 (227)
Q Consensus 137 ~~~~~~~~~~~~~ 149 (227)
+..++.|||.++.
T Consensus 161 ~~~kl~Dfg~~~~ 173 (283)
T cd05091 161 LNVKISDLGLFRE 173 (283)
T ss_pred CceEecccccccc
Confidence 6789999997764
No 308
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.89 E-value=4.1e-23 Score=161.67 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=110.0
Q ss_pred eecccCcceEEEEEE--cCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 14 KIGSGSFGDIYLGTN--ISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~--~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
.||+|+||.||+|.+ ..++..+|+|+++..... +.+.+|+.+++.++ |+||+++++++.. +..+++|||+ +
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD-NPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcC-CCcEEEEecCCC
Confidence 589999999999965 456789999988654322 35778999999997 9999999988754 4568999999 8
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+++.. ...+++..+..++.|++ +|++||+|||||| |++++. .+..++.|||.+..
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~---~~~~kl~Dfg~~~~ 144 (257)
T cd05116 80 GPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT---QHYAKISDFGLSKA 144 (257)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC---CCeEEECCCccccc
Confidence 999999986 46799999999999998 8999999999999 888876 56788999998764
No 309
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.89 E-value=2.2e-23 Score=164.82 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=108.0
Q ss_pred eecccCcceEEEEEEcCC------------------------CcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCe
Q psy3118 14 KIGSGSFGDIYLGTNIST------------------------GEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQ 67 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~------------------------~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~ 67 (227)
.||+|+||.||+|....+ ...+|+|.+..... ...+.+|+.+++.++ |+||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVS-HIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCC-CCCeee
Confidence 699999999999975321 13588888754322 235677889999998 999999
Q ss_pred eEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC----C
Q psy3118 68 IKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS----T 136 (227)
Q Consensus 68 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~----~ 136 (227)
+++++.++...++||||+ +++|.+++......+++..+..++.|++ +|++||+|||||| |+++..... .
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 999999999999999999 9999998876556789999999999998 9999999999999 888875321 2
Q ss_pred CeeeEEeeeccc
Q psy3118 137 GEEVAIKLECIK 148 (227)
Q Consensus 137 ~~~~~~~~~~~~ 148 (227)
+..++.|||.+.
T Consensus 161 ~~~kl~d~g~~~ 172 (274)
T cd05076 161 PFIKLSDPGVSF 172 (274)
T ss_pred ceeeecCCcccc
Confidence 346778888654
No 310
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.89 E-value=1.2e-22 Score=161.62 Aligned_cols=139 Identities=18% Similarity=0.155 Sum_probs=118.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEcccc--CcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSE--GDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~~~~~lv 81 (227)
++|...+.||.|++|.||+|.+..+++.+|+|....... ...+.+|+++++.++ |+||+++++++.. ++..+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEEEE
Confidence 479999999999999999999999999999999865432 235788999999997 9999999987754 4478999
Q ss_pred EeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+ +++|.+++... ...+++..+..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~---~~~~~l~dfg~~~~ 154 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR---KGQVKLCDFGVSGE 154 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec---CCeEEEeecccccc
Confidence 9999 99999887642 45689999999999988 8999999999999 888876 56789999997653
No 311
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.89 E-value=1.1e-22 Score=159.62 Aligned_cols=131 Identities=19% Similarity=0.204 Sum_probs=115.5
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||.|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.++ |+||+++++.+.+++..++++||+ +++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 6999999999999988899999999865422 235788999999997 999999999999999999999999 999
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|.+++.. ...+++..+..++.|++ +|++|++|+|||| |++++. .+..+++||+.+...
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~---~~~~~l~df~~~~~~ 143 (262)
T cd05572 80 LWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS---NGYVKLVDFGFAKKL 143 (262)
T ss_pred HHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC---CCCEEEeeCCccccc
Confidence 9999987 45689999999999988 9999999999999 888866 578999999987644
No 312
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.89 E-value=8.6e-23 Score=160.00 Aligned_cols=133 Identities=21% Similarity=0.297 Sum_probs=112.8
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|.+..+++.+|+|..+.... ......|..++....+|+|++++++++..++..++++||+ +
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 578999999999999999999999999865321 1234456666666556999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.++++. ...+++..+..++.|++ +|+.|++|+||+| |+++.. .+..++.|||.+..
T Consensus 82 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~---~~~~~l~dfg~~~~ 146 (260)
T cd05611 82 GDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ---TGHLKLTDFGLSRN 146 (260)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCcEEEeeccccee
Confidence 999999987 46789999999999988 9999999999999 988876 57789999997653
No 313
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=6.7e-23 Score=166.18 Aligned_cols=132 Identities=14% Similarity=0.156 Sum_probs=99.6
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcC-CCcEEEEEEeeecCC-------CCchhhHHHHHHHhcCCCCCC-eeEEcccc
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNIS-TGEEVAIKLECIKTR-------HPQLHIESKIYKLMQGGVGIP-QIKWCGSE 74 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~~~~~i~-~~~~~~~~ 74 (227)
.+.++|.+.+.||+|+||+||+|.+.. +++.+|||....... ...+.+|+++|++++ |+|++ .+++.
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 457789999999999999999999876 677889998653211 234789999999998 77776 56553
Q ss_pred CcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCC-ee-eEEEeeccCCCeeeEEeeec
Q psy3118 75 GDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQ-KS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 75 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDl-kp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
+..|+||||+ |++|.. ... .. . ..++.|++ +|++||+|||| || |++++. ++..+++|||.
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~~-~~---~---~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~---~~~ikLiDFGl 158 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-ARP-HG---D---PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGP---DGEAAVIDFQL 158 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hCc-cc---h---HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcC---CCCEEEEECcc
Confidence 3469999999 888863 221 11 1 23344444 99999999999 99 888854 56799999998
Q ss_pred cccCC
Q psy3118 147 IKTRH 151 (227)
Q Consensus 147 ~~~~~ 151 (227)
++...
T Consensus 159 A~~~~ 163 (365)
T PRK09188 159 ASVFR 163 (365)
T ss_pred ceecc
Confidence 87443
No 314
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.89 E-value=6.6e-24 Score=180.86 Aligned_cols=189 Identities=16% Similarity=0.081 Sum_probs=128.9
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCC-cEEEEEEee------------------ec-CCCCchhhHHHHHHHhcCCCC
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTG-EEVAIKLEC------------------IK-TRHPQLHIESKIYKLMQGGVG 64 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~-~~~aiK~~~------------------~~-~~~~~~~~E~~~l~~l~~~~~ 64 (227)
+.++|++++.||+|+||+||+|..+... ...+.|.+. .. .....+.+|+.++++++ |+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-HEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-CCC
Confidence 4568999999999999999998764322 222222110 00 01124678999999998 999
Q ss_pred CCeeEEccccCcEEEEEEeCCCCCHHHHHhhC----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeecc
Q psy3118 65 IPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNI 134 (227)
Q Consensus 65 i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~ 134 (227)
|+++++++...+..|+++|+++++|.+++... .......+++.++.|++ +|++||||||||| |+++..
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~-- 302 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC-- 302 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--
Confidence 99999999999999999999988888877542 12344667788899988 9999999999999 998876
Q ss_pred CCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 135 STGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.+..+++|||.+......... .. ....|+..................++|.+|..+++++.+
T Consensus 303 -~~~vkL~DFGla~~~~~~~~~--~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~ 364 (501)
T PHA03210 303 -DGKIVLGDFGTAMPFEKEREA--FD-YGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSH 364 (501)
T ss_pred -CCCEEEEeCCCceecCccccc--cc-ccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 678999999988643211000 00 001232221111111112222345788899999998865
No 315
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.89 E-value=3.1e-23 Score=164.14 Aligned_cols=138 Identities=18% Similarity=0.251 Sum_probs=121.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
...|+..+.||+|+||.||+|.+..++..+|+|....... ...+.+|+.+++++. |+||+++++++.+++..++||
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEEE
Confidence 4568889999999999999999998999999999865432 235788999999997 999999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||+ |++|.+++.. .++++.++..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+..
T Consensus 82 e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~---~~~~~l~dfg~~~~ 150 (277)
T cd06640 82 EYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE---QGDVKLADFGVAGQ 150 (277)
T ss_pred ecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC---CCCEEEccccccee
Confidence 999 9999998875 5789999999999987 8999999999999 888875 67799999997754
No 316
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.89 E-value=4.3e-23 Score=165.43 Aligned_cols=141 Identities=17% Similarity=0.199 Sum_probs=117.6
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
-.++|+..+.||+|+||.||+|.+..++. .+|+|........ ..+.+|+.+++.++ |+||+++++++..+.
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~- 82 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD-HPHLVRLLGVCLSPT- 82 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCCC-
Confidence 35679999999999999999999877776 4788887543221 25678999999997 999999999887654
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.++++||+ +++|.+++......+++..+..++.|++ +|++||+|||||| |+++.. .+..++.|||.+...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~---~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS---PNHVKITDFGLARLL 159 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC---CCceEEccccccccc
Confidence 57899999 8999999887555789999999999988 9999999999999 888865 567899999988643
No 317
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.89 E-value=8.9e-23 Score=159.15 Aligned_cols=138 Identities=23% Similarity=0.245 Sum_probs=122.2
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|.+.+.||+|+||.||++.+..+++.+|+|.+..... ...+.+|+++++.++ |+|++++.+.+...+..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEEE
Confidence 58999999999999999999988999999999865432 235788999999998 9999999999998999999999
Q ss_pred CC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++ +++|.+++... ...+++.++..++.|++ +|+.|++|+||+| |++++. .+..++.||+.+..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~---~~~~~l~d~~~~~~ 152 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS---NGLVKLGDFGISKV 152 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC---CCcEEECCccceee
Confidence 99 89999999874 36799999999999998 9999999999999 888865 57789999997754
No 318
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.89 E-value=1.8e-22 Score=162.84 Aligned_cols=139 Identities=19% Similarity=0.268 Sum_probs=120.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
..|+..+.||+|+||.||++.+..++..+|+|.+...... ..+.+|+++++.++ |+|++++++++.+++..++|
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEEEE
Confidence 4578899999999999999999889999999998653221 24778999999998 99999999999999999999
Q ss_pred EeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|||+.++|.+++.....++++.++..++.|++ +|++||+||||+| |+++.. .+..++.|||.+..
T Consensus 104 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~---~~~~kl~dfg~~~~ 174 (317)
T cd06635 104 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE---PGQVKLADFGSASI 174 (317)
T ss_pred EeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC---CCCEEEecCCCccc
Confidence 99997788888876566799999999999988 9999999999999 888865 57899999997653
No 319
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.89 E-value=2.9e-23 Score=166.02 Aligned_cols=134 Identities=21% Similarity=0.293 Sum_probs=117.4
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
|.....||+|+||.||+|.+..+++.+|+|.+.... ....+.+|+.+++.+. |||++++++.+..++..++++||+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEEEecCC
Confidence 455668999999999999998899999999986532 2345778999999997 999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+++|.+++.. ..+++.++..++.|++ +|++|++|||||| |++++. .+..++.|||.+.
T Consensus 102 ~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~---~~~~kL~dfg~~~ 165 (297)
T cd06659 102 GGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL---DGRVKLSDFGFCA 165 (297)
T ss_pred CCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc---CCcEEEeechhHh
Confidence 9999988765 5689999999999998 9999999999999 988866 6789999999775
No 320
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.89 E-value=1.2e-22 Score=161.10 Aligned_cols=190 Identities=20% Similarity=0.210 Sum_probs=142.1
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC--cEEEEEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG--DYNVMVM 82 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~~lv~ 82 (227)
|++.+.||.|+||.||+|.+..+++.+|+|.+..... ...+.+|+++++.++ |+|++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEEe
Confidence 6789999999999999999998999999999876531 234678999999998 99999999998887 8899999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
||++++|.+++......+++.++..++.|++ +|+.|++|+|||| |++++. ++..++.|||.+.........
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~---~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 80 EYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN---DGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred ccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC---CCCEEEccccceeeccCCCcc
Confidence 9997799998876445799999999999998 9999999999999 999876 678999999977643322110
Q ss_pred HHHHHHhhccCCC-C-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCH
Q psy3118 157 ESKIYKLMQGGVG-I-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL 207 (227)
Q Consensus 157 e~~~y~~l~g~~g-~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~ 207 (227)
.+....++.. . |.. ..+........++|.+|..+++++.+ ..+|+.
T Consensus 157 ---~~~~~~~~~~y~~PE~-~~~~~~~~~~~Dv~slG~~l~el~t~-~~p~~~ 204 (287)
T cd07840 157 ---DYTNRVITLWYRPPEL-LLGATRYGPEVDMWSVGCILAELFLG-KPIFQG 204 (287)
T ss_pred ---cccccccccccCCcee-eEccccCChHHHHHHHHHHHHHHHhC-CCCCCC
Confidence 0000001111 1 111 12222222345678889999999886 345543
No 321
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.89 E-value=1.2e-22 Score=161.53 Aligned_cols=140 Identities=24% Similarity=0.280 Sum_probs=123.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.+.|++.+.||+|+||.||+|.+..++..+|+|....... ...+.+|+++++.++ |+|++++++.+...+..++++||
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK-HPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEEEEEEec
Confidence 4578999999999999999999988899999999865443 346788999999998 89999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+ +++|.+++......+++.++..++.|++ +|+.|++|+||+| |+++.. ++..++.||+.+..
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~---~~~~~l~d~~~~~~ 165 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK---DGSVKLADFGFAAQ 165 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC---CCCEEECccchhhh
Confidence 9 8999999998433799999999999998 9999999999999 888875 67899999997653
No 322
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.89 E-value=1.2e-23 Score=166.44 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=119.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+.|+..+.||+|+||.||+|.+..++..+|+|....... ...+.+|+.++++++ |+||+++++++..++..++|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEEEEE
Confidence 456777889999999999999988999999998864432 235788999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++.. ..+++..+..++.|++ +|++|++|+||+| |+++.. .+..++.|||.+..
T Consensus 83 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~---~~~~~l~dfg~~~~ 150 (277)
T cd06642 83 YLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE---QGDVKLADFGVAGQ 150 (277)
T ss_pred ccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC---CCCEEEcccccccc
Confidence 99 8999998874 5789999999999988 9999999999999 888865 57789999997754
No 323
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.89 E-value=8e-23 Score=166.23 Aligned_cols=192 Identities=16% Similarity=0.117 Sum_probs=140.0
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----CCCCchhhHHHHHHHhcCCCCCCeeEEcccc--Cc
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSE--GD 76 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~--~~ 76 (227)
..+.++|++.+.||+|+||.||+|.+..+++.+|+|.+... .....+.+|+.+++++.+|+||+++++++.. +.
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~ 82 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK 82 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence 34678899999999999999999999889999999987542 1223567899999999459999999998754 44
Q ss_pred EEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 77 YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 77 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
..++||||++++|.+++.. ..+++..+..++.|++ +|++||+|||||| |++++. ++..++.|||.+...
T Consensus 83 ~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~---~~~~kl~d~g~~~~~ 157 (337)
T cd07852 83 DIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS---DCRVKLADFGLARSL 157 (337)
T ss_pred eEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC---CCcEEEeeccchhcc
Confidence 6899999997799998876 3788888888888888 9999999999999 988876 678999999977643
Q ss_pred CCchhh-HHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 151 HPQLHI-ESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 151 ~~~~~~-e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
...... .........|+..+ |.. ..+........++|.+|..+++++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~sDi~slG~~l~el~tg 209 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEI-LLGSTRYTKGVDMWSVGCILGEMLLG 209 (337)
T ss_pred ccccccccCcchhcccccccccCcee-eeccccccccchHHHHHHHHHHHHhC
Confidence 221110 00011111222221 221 11212222345678889999998876
No 324
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.89 E-value=1.3e-22 Score=160.77 Aligned_cols=131 Identities=19% Similarity=0.204 Sum_probs=109.3
Q ss_pred eecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhc--CCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 14 KIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
.||+|+||.||++.+..+++.+|+|.+...... ....+|..+++.+. +|++++.+++.+...+..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999988654221 12344554444442 4899999999999889999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+++|.+++.. ...+++..+..++.|++ +|+.||+|||||| |++++. ++..++.|||.+.
T Consensus 81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~---~~~~~l~dfg~~~ 145 (279)
T cd05633 81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE---HGHVRISDLGLAC 145 (279)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC---CCCEEEccCCcce
Confidence 9999998876 46799999999999998 9999999999999 988876 5789999999775
No 325
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.89 E-value=1.5e-22 Score=164.11 Aligned_cols=183 Identities=17% Similarity=0.170 Sum_probs=137.8
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEcccc-CcEE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSE-GDYN 78 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~~~ 78 (227)
.++++|++.+.||.|+||.||+|.+..+++.+|+|.+.... ....+.+|+++++.++ |||++++.+++.. ....
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLEDI 85 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCcE
Confidence 46789999999999999999999999999999999875432 2245778999999998 9999999998865 5578
Q ss_pred EEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 79 VMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 79 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
++++||++++|.++++. ..+++..+..++.|++ +|+.||+|||||| |++++. .+..++.|||.+.....
T Consensus 86 ~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~---~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 86 YFVTELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE---NCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEeehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC---CCCEEeCccccccccCC
Confidence 99999998899988874 5688888888999987 9999999999999 988875 67899999997764322
Q ss_pred chhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 153 QLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
... ...++... |... .+........++|.+|..+++++.+
T Consensus 161 ~~~-------~~~~~~~y~aPE~~-~~~~~~~~~~Dv~slG~il~el~tg 202 (328)
T cd07856 161 QMT-------GYVSTRYYRAPEIM-LTWQKYDVEVDIWSAGCIFAEMLEG 202 (328)
T ss_pred CcC-------CCcccccccCceee-eccCCcCcHHHHHHHHHHHHHHHhC
Confidence 110 00111111 2211 1111112234567888888888875
No 326
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.89 E-value=2.8e-22 Score=157.01 Aligned_cols=139 Identities=19% Similarity=0.177 Sum_probs=118.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccc--cCcEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGS--EGDYNVMV 81 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~--~~~~~~lv 81 (227)
+|++.+.||.|+||.||+|.+..++..+|+|.+..... .+++..|+++++.++ |+|++++++++. .+...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEEE
Confidence 58999999999999999999999999999998865432 235777999999998 999999988664 35568999
Q ss_pred EeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----cc-----ccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 82 MELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----IT-----APGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh-----~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
|||+ +++|.+++... ...+++.++..++.|++ +| +.+++|+|||| |+++.. .+..++.||+.
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~---~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA---NNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec---CCCEEEecccc
Confidence 9999 99999998763 45789999999999988 89 99999999999 888876 67899999997
Q ss_pred cccC
Q psy3118 147 IKTR 150 (227)
Q Consensus 147 ~~~~ 150 (227)
+...
T Consensus 157 ~~~~ 160 (265)
T cd08217 157 AKIL 160 (265)
T ss_pred cccc
Confidence 7643
No 327
>KOG1095|consensus
Probab=99.89 E-value=8.9e-23 Score=179.81 Aligned_cols=190 Identities=15% Similarity=0.259 Sum_probs=150.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC-C----cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST-G----EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~-~----~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
..+-++.+.||+|+||.||.|..... + ..||+|.+++..+ ...|.+|..+|++++ ||||+++.+.+.+...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCC-CcceeeEEEeecCCCC
Confidence 34678899999999999999987533 2 2489998866533 346899999999998 9999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhC------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEee
Q psy3118 78 NVMVMELL-GPSLEDLFNFC------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKL 144 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~ 144 (227)
.++++||| ||+|..++++. ...++..+.+.++.+++ |+++++|||||.. |.+++. ...+++.||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~---~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE---RRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc---cCcEEEccc
Confidence 99999999 99999999987 56799999999999999 9999999999999 999987 477899999
Q ss_pred eccccCCCchhhHHHHHHhhccCCCCCeeeeccccC----Cee-EEEeeccCCCHHHHHhHcCCCCC
Q psy3118 145 ECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEG----DYN-VMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 145 ~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~----~~~-~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
|.++... ....|+. .+ .+.-.+-|..++- .+. .-+.|.+|.-+||+|+.-..+|.
T Consensus 847 GlArDiy-----~~~yyr~-~~-~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~ 906 (1025)
T KOG1095|consen 847 GLARDIY-----DKDYYRK-HG-EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYP 906 (1025)
T ss_pred chhHhhh-----hchheec-cC-ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCC
Confidence 9997321 2222222 22 2334566665541 111 34579999999999988656664
No 328
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.89 E-value=3.2e-22 Score=161.14 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=120.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
.+.|...+.||+|+||.||+|.+..++..+|+|.+...... ..+.+|+++++.++ |+|++++++++.+++..++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEE
Confidence 44577788999999999999999999999999998653221 24678999999998 9999999999999999999
Q ss_pred EEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+|||+.++|.+++......+++.++..++.|++ +|+.|++|+|||| |+++.. .+..++.||+.+..
T Consensus 99 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~---~~~~kL~dfg~~~~ 170 (313)
T cd06633 99 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE---PGQVKLADFGSASK 170 (313)
T ss_pred EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC---CCCEEEeecCCCcc
Confidence 999997788888876556799999999999988 8999999999999 888865 57799999997653
No 329
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.89 E-value=1.7e-22 Score=164.84 Aligned_cols=184 Identities=17% Similarity=0.190 Sum_probs=136.7
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.++++++ |+||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLE 92 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC-CCcccceeeeeeeccccc
Confidence 356899999999999999999999999999999998865321 235678999999998 99999998877532
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++++++++++|.++++. ..+++..+..++.|++ +|+.||+|||||| |+++.. .+..++.|||.+
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~---~~~~kl~dfg~~ 167 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE---DCELKILDFGLA 167 (345)
T ss_pred ccccEEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC---CCCEEEeccccc
Confidence 34788999889999988875 5699999999999998 9999999999999 888876 578999999977
Q ss_pred ccCCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
........ ...++... |... .+........++|.+|..+++++.+.
T Consensus 168 ~~~~~~~~-------~~~~~~~y~aPE~~-~~~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 168 RHTDDEMT-------GYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred cccccccc-------ccccCCCccCHHHH-hCccCCCchhhHHHHHHHHHHHHhCC
Confidence 64321100 00111111 1111 11111122356788899998888763
No 330
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.89 E-value=5.2e-23 Score=163.90 Aligned_cols=138 Identities=16% Similarity=0.212 Sum_probs=115.3
Q ss_pred eEEEEeeecccCcceEEEEEEcC-----CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNIS-----TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
+|++.+.||+|+||.||+|.+.. ....+|+|....... ...+.+|+.+++.++ ||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCCcE
Confidence 47899999999999999998743 235789998754432 235778999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhC-----------------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEE
Q psy3118 80 MVMELL-GPSLEDLFNFC-----------------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMV 129 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~-----------------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~ 129 (227)
+++||+ +++|.+++... ...+++..+..++.|++ +|+.|++|||||| |++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999999 99999998642 13478889999999998 9999999999999 888
Q ss_pred EeeccCCCeeeEEeeecccc
Q psy3118 130 VGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~~ 149 (227)
+.. .+..++.|||.+..
T Consensus 160 l~~---~~~~kl~dfg~~~~ 176 (290)
T cd05045 160 VAE---GRKMKISDFGLSRD 176 (290)
T ss_pred EcC---CCcEEecccccccc
Confidence 865 56788999998753
No 331
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.89 E-value=8.4e-23 Score=162.80 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=117.7
Q ss_pred CeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
++|.+.+.||+|+||.||+|.+. .++..+|+|....... .+.+.+|++++++++ |+||+++++++..++..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCceE
Confidence 56999999999999999999853 2445689998754332 245888999999998 999999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCC
Q psy3118 80 MVMELL-GPSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTG 137 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~ 137 (227)
+||||+ +++|.+++.... ..+++..++.++.|++ +|++||+|||||| |++++. .+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~---~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc---CC
Confidence 999999 999999997531 3478999999999988 9999999999999 888876 57
Q ss_pred eeeEEeeecccc
Q psy3118 138 EEVAIKLECIKT 149 (227)
Q Consensus 138 ~~~~~~~~~~~~ 149 (227)
..++.|||.+..
T Consensus 161 ~~~l~dfg~a~~ 172 (291)
T cd05094 161 LVKIGDFGMSRD 172 (291)
T ss_pred cEEECCCCcccc
Confidence 889999997753
No 332
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.89 E-value=1.9e-22 Score=158.12 Aligned_cols=139 Identities=16% Similarity=0.245 Sum_probs=117.4
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
..++|++.+.||+|+||.||++.+. .+..+|+|....... .+.+.+|+.++++++ |+||+++++.+.+ ...+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeEEEEE
Confidence 4678999999999999999999853 556799998764332 346788999999998 9999999988887 67899999
Q ss_pred CC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 84 LL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 84 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|+ +++|.+++... ...+++.++..++.|++ +|+.|++|||||| |+++.. .+..++.||+.+..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~---~~~~~l~d~~~~~~ 151 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLARV 151 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC---CCcEEECCCcceee
Confidence 99 89999999864 45678888988999988 9999999999999 888855 57889999997653
No 333
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.89 E-value=6e-23 Score=160.82 Aligned_cols=129 Identities=21% Similarity=0.292 Sum_probs=114.4
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||+|+||.||++.+..+++.+|+|.+..... ...+.+|++++++++ |+|++++++.+..++..++++||+ +++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 6899999999999988999999999865422 235788999999998 999999999999999999999999 899
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|.+++... ..+++.++..++.|++ +|++|++|+||+| |++++. .+..++.|||.+.
T Consensus 80 L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~---~~~~~l~dfg~~~ 141 (265)
T cd05579 80 LASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS---NGHLKLTDFGLSK 141 (265)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC---CCCEEEEecccch
Confidence 99999873 5799999999999998 9999999999999 888876 5778999999765
No 334
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.89 E-value=1.2e-22 Score=158.96 Aligned_cols=131 Identities=15% Similarity=0.212 Sum_probs=111.1
Q ss_pred eeecccCcceEEEEEEcCCC---cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNISTG---EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~---~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|+||.||+|.+..++ ..+|+|....+.. ...+.+|+.+++.+. |+|++++++++.. +..+++|||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD-HPCIVRLIGVCKG-EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcC-CCCeeeEEEEEcC-CceEEEEEeCC
Confidence 46899999999999876554 7899999865433 235788999999997 9999999987764 4579999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+++|.+++.. ...+++.++..++.|++ +|+.|++|+|||| |++++. .+..++.||+.+..
T Consensus 79 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~---~~~~kl~df~~~~~ 144 (257)
T cd05060 79 LGPLLKYLKK-RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN---RHQAKISDFGMSRA 144 (257)
T ss_pred CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC---CCcEEeccccccce
Confidence 8999999987 35799999999999998 9999999999999 888865 67899999997764
No 335
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.89 E-value=8.1e-23 Score=162.56 Aligned_cols=138 Identities=16% Similarity=0.275 Sum_probs=119.3
Q ss_pred eEEEEeeecccCcceEEEEEEc---CCCcEEEEEEeeecC------CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNI---STGEEVAIKLECIKT------RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~---~~~~~~aiK~~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
+|++.+.||+|+||.||++.+. .+++.+|+|..+... ....+.+|+.++.++.+|++|+++.+.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4889999999999999999864 467889999886431 1235778999999998899999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 79 VMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++||||+ +++|.+.+.. ...+++.++..++.|++ +|+.|++|+|||| |++++. ++..+++|||.+..
T Consensus 81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~---~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS---EGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC---CCCEEEEECccccc
Confidence 9999999 8999999876 46789999999999988 9999999999999 999876 57799999997654
No 336
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.89 E-value=9.6e-23 Score=161.32 Aligned_cols=130 Identities=20% Similarity=0.207 Sum_probs=113.4
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||+|+||+||+|.+..+|+.+|+|.+.... ....+.+|+++++.++ |||++++++.+...+..++||||+ +++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 699999999999999999999999986532 1224567999999998 999999999999999999999999 999
Q ss_pred HHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 89 LEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 89 L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|.+++... ...+++.++..++.|++ +|+.|++|+||+| |++++. ++..++.|||.+.
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~---~~~~~l~dfg~~~ 143 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD---HGNVRISDLGLAV 143 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC---CCCEEEccCcchh
Confidence 99998764 23699999999999988 9999999999999 998876 5778999999765
No 337
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.89 E-value=1.2e-22 Score=158.23 Aligned_cols=131 Identities=18% Similarity=0.226 Sum_probs=112.6
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
+.||+|+||.||+|.. .++..+|+|....... ...+.+|+++++.++ |+||+++++.+...+..+++|||+ +++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 3689999999999985 4688999998754322 225778999999997 999999999999999999999999 999
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|.+++......+++.++..++.|++ +|++|++|||||| |++++. ++..++.|||.+.
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~---~~~~~l~d~g~~~ 141 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE---NNVLKISDFGMSR 141 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC---CCeEEECCCccce
Confidence 9999876555689999999999987 8999999999999 888865 6778999999775
No 338
>KOG0666|consensus
Probab=99.89 E-value=3.1e-24 Score=164.85 Aligned_cols=184 Identities=14% Similarity=0.148 Sum_probs=139.2
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEcccc-CcE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSE-GDY 77 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~~ 77 (227)
..|+....||+|+||.||+|....++. .+|||.++...+ .....||+.+++.|+ |+|++.+..++.+ +..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK-HPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc-CCcchhHHHHHhccCce
Confidence 358899999999999999997655443 789998865533 346789999999998 9999999988887 788
Q ss_pred EEEEEeCCCCCHHHHHhhC----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec-cCCCeeeEEeeec
Q psy3118 78 NVMVMELLGPSLEDLFNFC----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN-ISTGEEVAIKLEC 146 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~-~~~~~~~~~~~~~ 146 (227)
.++++||...+|+.+++.. .+.++...+..|+.||+ +|++=|+|||||| ||++--+ ...|.+++.|+|+
T Consensus 103 v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl 182 (438)
T KOG0666|consen 103 VWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL 182 (438)
T ss_pred EEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence 9999999999999999864 34688999999999999 9999999999999 7776543 3458999999998
Q ss_pred cccCCCchhhHHHHHHhhccCCCCCeeee-c------cccCCeeEEEeeccCCCHHHHH
Q psy3118 147 IKTRHPQLHIESKIYKLMQGGVGIPQIKW-C------GSEGDYNVMVMELLGPSLEDLF 198 (227)
Q Consensus 147 ~~~~~~~~~~e~~~y~~l~g~~g~p~~~~-~------g~~~~~~~~vm~~lg~~l~~l~ 198 (227)
++.....+. .+....++....| . |.......+++|..|+...||.
T Consensus 183 aR~~~~plk-------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL 234 (438)
T KOG0666|consen 183 ARLFNNPLK-------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL 234 (438)
T ss_pred HHHhhcccc-------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence 874322111 0101111112222 2 3345555777888888888875
No 339
>KOG0690|consensus
Probab=99.89 E-value=4.3e-24 Score=165.11 Aligned_cols=139 Identities=18% Similarity=0.232 Sum_probs=123.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
-++|..+++||+|.||+|-+|+.+.+++.+|+|++++.- .......|-++|+..+ ||.+..+...++..+.+++
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEE
Confidence 457899999999999999999999999999999987652 2224556899999998 9999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||||+ ||.|.-.++. .+.|++..++.+...|+ +|+++||.||+|. |.+++. +|..++.|||+.+.
T Consensus 246 VMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk---DGHIKitDFGLCKE 317 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK---DGHIKITDFGLCKE 317 (516)
T ss_pred EEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc---CCceEeeecccchh
Confidence 99999 9999888877 57899999999998887 9999999999999 888887 79999999998874
No 340
>KOG0671|consensus
Probab=99.89 E-value=9.3e-24 Score=165.80 Aligned_cols=178 Identities=16% Similarity=0.175 Sum_probs=137.3
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeee-cCCCCchhhHHHHHHHhcCC-C----CCCeeEEccccCc
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECI-KTRHPQLHIESKIYKLMQGG-V----GIPQIKWCGSEGD 76 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~-~~~~~~~~~E~~~l~~l~~~-~----~i~~~~~~~~~~~ 76 (227)
..+.+||++...+|+|+||.|-.+.+..++..||||+++. +.-++....|+++++++..+ | -++++.+++.-.+
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 4568899999999999999999999999999999999854 34456678899999999633 2 3777888899999
Q ss_pred EEEEEEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC--------------
Q psy3118 77 YNVMVMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS-------------- 135 (227)
Q Consensus 77 ~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~-------------- 135 (227)
+.++|+|.+|.|+.|.++.+ -.+++...++.++.|++ +|+.+++|-|||| ||++.++..
T Consensus 165 hiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 165 HICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred ceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceec
Confidence 99999999999999999985 45799999999999999 9999999999999 999876432
Q ss_pred ---CCeeeEEeeeccccCCC--chhhHHHHHHhhccCCCCCeeeeccccCCee
Q psy3118 136 ---TGEEVAIKLECIKTRHP--QLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 183 (227)
Q Consensus 136 ---~~~~~~~~~~~~~~~~~--~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~ 183 (227)
...+.++|||.++.... ..-..+.-|++++-.. .+.|.-+.|.|.
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL---gLGwS~pCDvWS 294 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL---GLGWSQPCDVWS 294 (415)
T ss_pred cCCCcceEEEecCCcceeccCcceeeeccccCCchhee---ccCcCCccCcee
Confidence 23456889998864322 2223344444433222 345555544444
No 341
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.88 E-value=1.1e-22 Score=161.04 Aligned_cols=188 Identities=20% Similarity=0.201 Sum_probs=141.4
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
|++.+.||+|++|.||+|.+..+++.+|+|.+...... ..+.+|+.++++++ |++++++++.+..++..++++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEec
Confidence 56788999999999999999889999999988654322 35778999999998 99999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 85 LGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
++++|.+.+......+++.++..++.|++ +|+.||+|+|||| |++++. ++..+++||+.+....+...
T Consensus 80 ~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~---~~~~~l~df~~~~~~~~~~~--- 153 (283)
T cd05118 80 MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT---EGVLKLADFGLARSFGSPVR--- 153 (283)
T ss_pred cCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC---CCcEEEeeeeeeEecCCCcc---
Confidence 97799998887556899999999999998 9999999999999 888875 57899999997764433220
Q ss_pred HHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 159 KIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 159 ~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.+....++... |... .+........++|.+|..+++++.+ ..+|+
T Consensus 154 -~~~~~~~~~~~~~PE~~-~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~ 200 (283)
T cd05118 154 -PYTHYVVTRWYRAPELL-LGDKGYSTPVDIWSVGCIFAELLSR-RPLFP 200 (283)
T ss_pred -cccCccCcccccCcHHH-hcCCCCCchhHHHHHHHHHHHHHhC-CCCCC
Confidence 00000111100 1111 1111222235678889888888876 34553
No 342
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.88 E-value=6.2e-23 Score=163.25 Aligned_cols=139 Identities=16% Similarity=0.216 Sum_probs=117.9
Q ss_pred cCeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+..... ...+.+|+.+++++. |+|++++++++..++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD-HPNIVKLLGVCAVGKP 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCc
Confidence 467999999999999999999874 3567899998865432 235778999999997 9999999999999999
Q ss_pred EEEEEeCC-CCCHHHHHhhCC---------------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEE
Q psy3118 78 NVMVMELL-GPSLEDLFNFCS---------------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMV 129 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~---------------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~ 129 (227)
.+++|||+ +++|.+++.... ..+++.+++.++.|++ +|++|++|||||| |++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 99999999 899999997421 2467888889999988 9999999999999 888
Q ss_pred EeeccCCCeeeEEeeeccc
Q psy3118 130 VGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 130 l~~~~~~~~~~~~~~~~~~ 148 (227)
+.. .+..++.|||.+.
T Consensus 163 ~~~---~~~~~l~dfg~~~ 178 (288)
T cd05050 163 VGE---NMVVKIADFGLSR 178 (288)
T ss_pred ecC---CCceEECccccce
Confidence 865 6788999999765
No 343
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.88 E-value=7.8e-23 Score=165.72 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=111.2
Q ss_pred eeeccc--CcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSG--SFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G--~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
..||+| +||+||+|.+..+++.||+|+...... .+.+.+|+.+++.++ |+||+++++++..++..+++|||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEeccc
Confidence 456776 999999999999999999999865432 245778999988888 999999999999999999999999
Q ss_pred CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 86 GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 86 ~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
+++|.+++... ...+++..+..++.|++ +|++||+|||||| |+++.. .+...+.||+.
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~---~~~~~~~~~~~ 147 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG---DGLVSLSGLSH 147 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC---CCcEEEechHH
Confidence 89999998864 34689999999999988 9999999999999 999976 56677778764
No 344
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.88 E-value=2.6e-23 Score=165.90 Aligned_cols=136 Identities=23% Similarity=0.273 Sum_probs=118.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
+.|.....||+|+||.||++.+..++..+|||.+.... ....+.+|+.+++.++ |+|++++++.+..++..+++|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEEEEEeC
Confidence 45666788999999999999998899999999875432 2235778999999997 99999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+ +++|.+++.. ..+++.++..++.|++ +|++||+|||||| |++++. .+..++.|||.+.
T Consensus 101 ~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~---~~~~kL~dfg~~~ 166 (292)
T cd06658 101 LEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCA 166 (292)
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---CCCEEEccCcchh
Confidence 9 8999998864 5689999999999998 9999999999999 888876 5779999999765
No 345
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.88 E-value=1.1e-22 Score=159.73 Aligned_cols=136 Identities=14% Similarity=0.062 Sum_probs=108.5
Q ss_pred eeecccCcceEEEEEEcC------------CCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 13 RKIGSGSFGDIYLGTNIS------------TGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~------------~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
+.||+|+||.||+|.... ....+|+|....... ...+..|+.+++.++ ||||+++++++..+...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS-HKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCC
Confidence 468999999999998532 123588888654322 235677889999998 99999999999988889
Q ss_pred EEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCC----CeeeEEeeecc
Q psy3118 79 VMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIST----GEEVAIKLECI 147 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~----~~~~~~~~~~~ 147 (227)
+++|||+ +++|..++......+++..+..++.|++ +|++||+|||||| |++++.+... ...++.|||.+
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999 8899888876556799999999999998 9999999999999 9988754211 13677888876
Q ss_pred cc
Q psy3118 148 KT 149 (227)
Q Consensus 148 ~~ 149 (227)
..
T Consensus 160 ~~ 161 (262)
T cd05077 160 IT 161 (262)
T ss_pred cc
Confidence 53
No 346
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.88 E-value=9.3e-23 Score=161.68 Aligned_cols=140 Identities=17% Similarity=0.241 Sum_probs=117.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEc-----CCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI-----STGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
..++.+.+.||+|+||.||++... .++..+|+|....... ...+.+|+++++.++ |+||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGRPL 82 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCCce
Confidence 457899999999999999999742 3456899998754322 246888999999997 99999999999998999
Q ss_pred EEEEeCC-CCCHHHHHhhCC--------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCC
Q psy3118 79 VMVMELL-GPSLEDLFNFCS--------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTG 137 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~--------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~ 137 (227)
+++|||+ +++|.+++.... ..+++..++.++.|++ +|++|++|||||| |+++.. .+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~---~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ---GL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC---CC
Confidence 9999999 999999987632 2478899999999988 9999999999999 888865 67
Q ss_pred eeeEEeeecccc
Q psy3118 138 EEVAIKLECIKT 149 (227)
Q Consensus 138 ~~~~~~~~~~~~ 149 (227)
..++.|||.+..
T Consensus 160 ~~kL~dfg~~~~ 171 (280)
T cd05092 160 VVKIGDFGMSRD 171 (280)
T ss_pred CEEECCCCceeE
Confidence 789999997753
No 347
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.88 E-value=1.9e-22 Score=159.58 Aligned_cols=194 Identities=16% Similarity=0.151 Sum_probs=144.3
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
|++.+.||+|+||.||+|.+..+++.+|+|....... .+.+..|+.++++++ |+|++++++++...+..+++||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEecC
Confidence 6778899999999999999999999999999876431 235677999999998 99999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 85 LGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
++++|.+++......+++.++..++.|++ +|+.||+|+||+| |++++. .+..++.|||.+.........
T Consensus 80 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~---~~~~~l~d~g~~~~~~~~~~~-- 154 (282)
T cd07829 80 CDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPLRT-- 154 (282)
T ss_pred cCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC---CCCEEEecCCcccccCCCccc--
Confidence 97799999987445799999999999998 9999999999999 888876 678999999977643221110
Q ss_pred HHHHhhccCC-CC-CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHH
Q psy3118 159 KIYKLMQGGV-GI-PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLL 212 (227)
Q Consensus 159 ~~y~~l~g~~-g~-p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~ 212 (227)
+....++. .. |.. ..+........++|.+|..+++++.+ ..+|...+...
T Consensus 155 --~~~~~~~~~~~aPE~-~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~~~~~~~ 206 (282)
T cd07829 155 --YTHEVVTLWYRAPEI-LLGSKHYSTAVDIWSVGCIFAEMITG-KPLFPGDSEID 206 (282)
T ss_pred --cCccccCcCcCChHH-hcCCcCCCccccHHHHHHHHHHHHhC-CCCCCCccHHH
Confidence 00000000 00 111 11111222346778889999998886 45665444433
No 348
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.88 E-value=5.3e-22 Score=157.25 Aligned_cols=132 Identities=18% Similarity=0.187 Sum_probs=109.3
Q ss_pred eecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHh--cCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 14 KIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLM--QGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l--~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
.||+|+||.||+|.+..+++.||+|.+...... .....|..+++.+ .+|++++.+.+++..++..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998654211 1233454444443 24899999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|++|.+++.. ...+++.++..++.|++ +|+++|+|||||| |++++. ++..++.|||.+..
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~---~~~~kl~dfg~~~~ 146 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE---HGHVRISDLGLACD 146 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC---CCCEEEccCcCccc
Confidence 9999998876 56799999999999998 9999999999999 888876 56789999997753
No 349
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.88 E-value=2.9e-22 Score=156.25 Aligned_cols=138 Identities=22% Similarity=0.343 Sum_probs=122.7
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC--cEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG--DYNVMV 81 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~--~~~~lv 81 (227)
+|+..+.||+|++|.||+|.+..++..+++|....... .+.+.+|++++++++ |+||+++++.+... +..+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEEE
Confidence 58899999999999999999988999999999866542 346888999999998 99999999999888 889999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+|++ +++|.+++... ..+++.++..++.|++ +|+.|++|+||+| |+++.. .+..++.||+.+...
T Consensus 80 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~---~~~~~l~d~~~~~~~ 151 (260)
T cd06606 80 LEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DGVVKLADFGCAKRL 151 (260)
T ss_pred EEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CCCEEEcccccEEec
Confidence 9999 99999999873 4899999999999998 9999999999999 888876 578899999976543
No 350
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.88 E-value=2.6e-22 Score=156.40 Aligned_cols=132 Identities=23% Similarity=0.290 Sum_probs=114.7
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
+.||+|+||.||+|.+.. ++.||+|....... ...+.+|+++++.+. |+||+++++++.+.+..+++|||+ +++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 468999999999999877 99999998765432 235788999999998 999999999999999999999999 999
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|.+++......+++..+..++.|++ +|++|++|||||| |++++. ++..+++||+.+..
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~---~~~~~l~d~g~~~~ 142 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE---NNVLKISDFGMSRE 142 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC---CCcEEEeecccccc
Confidence 9999976555788999999988887 9999999999999 888865 67899999997753
No 351
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.88 E-value=1.7e-22 Score=159.14 Aligned_cols=133 Identities=17% Similarity=0.156 Sum_probs=109.2
Q ss_pred eeecccCcceEEEEEEc--CCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 13 RKIGSGSFGDIYLGTNI--STGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+.||+|+||.||+|... .++..+|+|.++..... ..+.+|+.+++.++ ||||+++++++.+....++||||+ +
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 36899999999999753 35567999987554322 25777999999998 999999999999888899999999 9
Q ss_pred CCHHHHHhhC----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 87 PSLEDLFNFC----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 87 ~~L~~~~~~~----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|.+++... ....++..+..++.|++ +|++|++|||||| |++++. .+..++.|||.+..
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~---~~~~kL~dfg~~~~ 149 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA---DLTVKIGDYGLSHN 149 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC---CCcEEECCcccccc
Confidence 9999998753 12456777778888887 9999999999999 888765 57789999997753
No 352
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.88 E-value=4.2e-22 Score=162.36 Aligned_cols=188 Identities=18% Similarity=0.186 Sum_probs=137.9
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccC----
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEG---- 75 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---- 75 (227)
.+.++|.+.+.||+|+||.||+|.+..+++.+|+|.+..... ...+.+|+.+++.++ |+||+++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSGD 90 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC-CCCccchhheecccccCC
Confidence 356899999999999999999999998999999998865322 234678999999997 99999998887643
Q ss_pred --cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 76 --DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
...++++||+..+|.++.. ..+++.++..++.|++ +|+.|++|||||| |+++.. .+..++.|||.+
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~---~~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE---DCELKILDFGLA 164 (342)
T ss_pred CCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC---CCCEEEeeCCCC
Confidence 3469999999778777653 4689999999999988 9999999999999 998876 678999999987
Q ss_pred ccCCCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCH
Q psy3118 148 KTRHPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL 207 (227)
Q Consensus 148 ~~~~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~ 207 (227)
........ ...++... |... .+........++|.+|..+++++.+ ..+|..
T Consensus 165 ~~~~~~~~-------~~~~~~~y~aPE~~-~~~~~~~~~~Dv~slGvil~el~~g-~~pf~~ 217 (342)
T cd07879 165 RHADAEMT-------GYVVTRWYRAPEVI-LNWMHYNQTVDIWSVGCIMAEMLTG-KTLFKG 217 (342)
T ss_pred cCCCCCCC-------CceeeecccChhhh-cCccccCchHHHHHHHHHHHHHHhC-CCCCCC
Confidence 64322110 00111110 1111 1111112235678889999999875 345543
No 353
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.88 E-value=4.4e-22 Score=156.72 Aligned_cols=140 Identities=20% Similarity=0.267 Sum_probs=116.0
Q ss_pred eEEEEeeecccCcceEEEEEEcC-CCcEEEEEEeeecCC---------C---CchhhHHHHHHHhcCCCCCCeeEEcccc
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNIS-TGEEVAIKLECIKTR---------H---PQLHIESKIYKLMQGGVGIPQIKWCGSE 74 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~---------~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~ 74 (227)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+..... . ..+..|+.++.+..+|+|++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999877 678999998753211 0 1356688888765459999999999999
Q ss_pred CcEEEEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEe
Q psy3118 75 GDYNVMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIK 143 (227)
Q Consensus 75 ~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~ 143 (227)
++..+++|||+ +++|.+++... ...+++..+..++.|++ +|+ .|++|+|||| |+++.. .+..++.|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~---~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE---DDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC---CCcEEEec
Confidence 99999999999 99999988542 45789999999999988 895 7899999999 998876 57899999
Q ss_pred eeccccC
Q psy3118 144 LECIKTR 150 (227)
Q Consensus 144 ~~~~~~~ 150 (227)
||.+...
T Consensus 158 fg~~~~~ 164 (269)
T cd08528 158 FGLAKQK 164 (269)
T ss_pred ccceeec
Confidence 9987643
No 354
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.88 E-value=2.1e-22 Score=157.49 Aligned_cols=133 Identities=19% Similarity=0.186 Sum_probs=113.4
Q ss_pred eeecccCcceEEEEEEcC-CCc--EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 13 RKIGSGSFGDIYLGTNIS-TGE--EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~-~~~--~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.||+|++|.||+|.+.. .+. .+|+|.+..... .+.+.+|+.++++++ |+||+++++.+.. ...+++|||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEecC
Confidence 468999999999999855 333 699999866543 246788999999998 9999999998888 8899999999
Q ss_pred CCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 86 GPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 86 ~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++|.+.+.... ..+++..+..++.|++ +|++|++|+|||| |++++. .+..++.|||.+...
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~---~~~~kl~dfg~~~~~ 147 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS---DDKVKIGDFGLMRAL 147 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec---CCEEEeccccccccc
Confidence 999999998753 4689999999999988 8999999999999 888877 478999999977643
No 355
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.88 E-value=1.8e-22 Score=159.85 Aligned_cols=142 Identities=18% Similarity=0.218 Sum_probs=118.6
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcC----CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEcccc-Cc
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNIS----TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSE-GD 76 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~ 76 (227)
-.++|++.+.||+|+||.||+|.+.. ++..+|+|.+..... ...+.+|+.++++++ |+||+++++++.. +.
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCC
Confidence 46789999999999999999999865 357899998754322 235778999999997 9999999987665 56
Q ss_pred EEEEEEeCC-CCCHHHHHhhCC-------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEE
Q psy3118 77 YNVMVMELL-GPSLEDLFNFCS-------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAI 142 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~ 142 (227)
..++++||+ +++|.+++.... ..+++.++..++.|++ +|++|++|||||| |+++.. .+..++.
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~---~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE---ELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC---CCcEEEC
Confidence 789999999 899999987631 4589999999999998 9999999999999 888865 5788999
Q ss_pred eeeccccC
Q psy3118 143 KLECIKTR 150 (227)
Q Consensus 143 ~~~~~~~~ 150 (227)
|||.++..
T Consensus 160 d~g~~~~~ 167 (280)
T cd05043 160 DNALSRDL 167 (280)
T ss_pred CCCCcccc
Confidence 99987643
No 356
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.88 E-value=4e-22 Score=158.06 Aligned_cols=187 Identities=18% Similarity=0.189 Sum_probs=140.1
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
|++.+.||.|++|.||+|.+..+|..||+|.+...... ..+.+|+++++.++ |+|++++++++.+++..+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEec
Confidence 67889999999999999999999999999988654321 35778999999998 99999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 85 LGPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 85 ~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
++++|.+++.... ..+++..+..++.|++ +|++|++|+||+| |++++. ++..++.||+.+.........
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 80 LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred cCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCcEEEeecccccccCCCccc-
Confidence 9779999987642 3689999999999998 9999999999999 988876 678999999987533211100
Q ss_pred HHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 158 SKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 158 ~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
+....++... |... .+........++|.+|..+++++.+. .+|
T Consensus 156 ---~~~~~~~~~~~aPE~~-~~~~~~~~~~Di~slG~~l~~l~~g~-~pf 200 (283)
T cd07835 156 ---YTHEVVTLWYRAPEIL-LGSRQYSTPVDIWSIGCIFAEMVNRR-PLF 200 (283)
T ss_pred ---cCccccccCCCCCcee-ecCcccCcHHHHHHHHHHHHHHHhCC-CCC
Confidence 0000011111 2211 11111122356788899999998864 444
No 357
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.88 E-value=3.8e-22 Score=158.13 Aligned_cols=188 Identities=21% Similarity=0.214 Sum_probs=141.5
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
|++.+.||+|+||.||+|.+..+++.+|||....... .....+|+..++++.+|+|++++++.+..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 6789999999999999999988999999998754322 1234568999999987999999999999999999999999
Q ss_pred CCCHHHHHhhCC-CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 86 GPSLEDLFNFCS-RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 86 ~~~L~~~~~~~~-~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
+++|.+.+.... ..+++.++..++.|++ +|++|++|+||+| |++++. .+..++.||+.+.........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~---~~~~~l~d~~~~~~~~~~~~~-- 155 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG---PEVVKIADFGLAREIRSRPPY-- 155 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC---CCCEEEeecccceeccCCCCc--
Confidence 889999888742 4789999999999998 9999999999999 888876 678999999977633221110
Q ss_pred HHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 159 KIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 159 ~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
....++... |.... +........++|.+|..+++++.+. .+|.
T Consensus 156 ---~~~~~~~~~~aPE~~~-~~~~~~~~~Di~s~G~~l~el~~g~-~~~~ 200 (283)
T cd07830 156 ---TDYVSTRWYRAPEILL-RSTSYSSPVDIWALGCIMAELYTLR-PLFP 200 (283)
T ss_pred ---CCCCCcccccCceeee-cCcCcCCccchhhHHHHHHHHHhCC-CccC
Confidence 001111111 22221 1112223466788899999999863 4453
No 358
>KOG1035|consensus
Probab=99.88 E-value=3.5e-23 Score=181.97 Aligned_cols=139 Identities=18% Similarity=0.144 Sum_probs=113.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccc---------
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGS--------- 73 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~--------- 73 (227)
.++|+.++.||+||||.||+++++-+|+.||||.++.+.. .....+|+.++.+|+ |||||+++..+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCccccc
Confidence 3567888999999999999999999999999999876542 235788999999998 999998864430
Q ss_pred --------------------------------------------------------------------------------
Q psy3118 74 -------------------------------------------------------------------------------- 73 (227)
Q Consensus 74 -------------------------------------------------------------------------------- 73 (227)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------c-------CcEEEEEEeCC-CCCHHHHHhhCCCCc-CHHHHHHHHHHhc-----ccc
Q psy3118 74 -----------------------E-------GDYNVMVMELL-GPSLEDLFNFCSRRF-SLKTVLLLADQLS-----ITA 116 (227)
Q Consensus 74 -----------------------~-------~~~~~lv~e~~-~~~L~~~~~~~~~~~-~~~~~~~i~~qi~-----lh~ 116 (227)
+ +..+||-|||| .-.|.++++. +... ....++.+++||+ +|+
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~-N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR-NHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh-cccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 02479999999 6666666665 2322 4777888888888 999
Q ss_pred cceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 117 PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 117 ~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
+||||||||| ||+++. .+.+++.|||+++.
T Consensus 716 ~giIHRDLKP~NIFLd~---~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDS---RNSVKIGDFGLATD 746 (1351)
T ss_pred CceeeccCCcceeEEcC---CCCeeecccccchh
Confidence 9999999999 999986 67899999999875
No 359
>KOG4721|consensus
Probab=99.88 E-value=7.5e-23 Score=168.24 Aligned_cols=167 Identities=16% Similarity=0.189 Sum_probs=131.6
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHH
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLE 90 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 90 (227)
++-||+|+.|.||+|+. .++.||||.++.-. ..++.-|++|+ |+||+.+.+++.....++|||||| .|.|.
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~elk-----ETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRELK-----ETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhhhh-----hhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccccccHH
Confidence 34589999999999987 67899999763311 23788899998 999999999999999999999999 99999
Q ss_pred HHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHHhh
Q psy3118 91 DLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLM 164 (227)
Q Consensus 91 ~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l 164 (227)
.+++. ++.++......+..+|+ ||...|||||||. |+++.. +..+++.|||.++..+.. .-.+..
T Consensus 201 ~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~---~d~VKIsDFGTS~e~~~~-----STkMSF 271 (904)
T KOG4721|consen 201 EVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY---DDVVKISDFGTSKELSDK-----STKMSF 271 (904)
T ss_pred HHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec---cceEEeccccchHhhhhh-----hhhhhh
Confidence 99998 68899999999999999 9999999999996 999987 566889999988754322 111222
Q ss_pred ccCCCCCeeeecccc-----CCeeEEEeeccCCCHHHHHhH
Q psy3118 165 QGGVGIPQIKWCGSE-----GDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 165 ~g~~g~p~~~~~g~~-----~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.|| +.|..++ --....++|.+|..|||++.+
T Consensus 272 aGT-----VaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~ 307 (904)
T KOG4721|consen 272 AGT-----VAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTG 307 (904)
T ss_pred hhh-----HhhhCHHHhhcCCcccccceehhHHHHHHHHhc
Confidence 343 2333332 112245678889999998875
No 360
>KOG0986|consensus
Probab=99.88 E-value=1.4e-23 Score=168.27 Aligned_cols=186 Identities=19% Similarity=0.157 Sum_probs=144.6
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 79 (227)
-.+.|..-++||+||||.|+-|.-+.||+-+|+|.+.+..- ..-..+|..+|++++ .+.||.+-..+++.+.++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDALC 261 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceE
Confidence 35678999999999999999999999999999998755421 123677999999998 789999999999999999
Q ss_pred EEEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 80 MVMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 80 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
+||..+ ||+|.-.+-.. +..|++..++.++.+|+ +|+.+||.||+|| ||++++ .|.+.+.|+|++....
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd---~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD---HGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc---CCCeEeeccceEEecC
Confidence 999999 99987666554 45899999999999998 8999999999999 999987 7999999999886443
Q ss_pred CchhhHHHHHHhhccCCCCCeeeeccccCCeeE-EEeeccCCCHHHHHhH
Q psy3118 152 PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNV-MVMELLGPSLEDLFNF 200 (227)
Q Consensus 152 ~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~-~vm~~lg~~l~~l~~~ 200 (227)
..... +.-.||.|+..+.-...+. |.+ .+-|.+|..++++..+
T Consensus 339 ~g~~~-----~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G 382 (591)
T KOG0986|consen 339 EGKPI-----RGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAG 382 (591)
T ss_pred CCCcc-----ccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcc
Confidence 21111 1113555554433333333 332 3346678888888765
No 361
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.88 E-value=1.7e-22 Score=164.74 Aligned_cols=139 Identities=21% Similarity=0.291 Sum_probs=120.5
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcE---
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY--- 77 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~--- 77 (227)
+.++|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+.+|+.+++.+. |+|++++.+++..++.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhccccccc
Confidence 5788999999999999999999999999999999875432 1235678999999997 9999999887765544
Q ss_pred ---EEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 78 ---NVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 78 ---~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
.++|+||++++|.+++.. ..+++.++..++.|++ +|+.||+|||||| |+++.. ++..+++|||.+.
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~---~~~~kL~dfg~~~ 166 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE---DCELKILDFGLAR 166 (343)
T ss_pred cccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC---CCCEEEccccccc
Confidence 899999999999999885 5799999999999998 9999999999999 988876 6789999999876
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 167 ~ 167 (343)
T cd07851 167 H 167 (343)
T ss_pred c
Confidence 4
No 362
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.88 E-value=6.6e-22 Score=154.34 Aligned_cols=139 Identities=18% Similarity=0.166 Sum_probs=120.4
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+|++.+.||+|+||.||++.+..+++.+|+|....... ...+.+|+.+++.++ |+||+++.+.+.+....+++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEeh
Confidence 58999999999999999999999999999999865321 235677999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 84 LL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 84 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|+ +++|.+++... ...+++..+..++.|++ +|+.|++|+||+| |+++.. .+..++.|||.+...
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~---~~~~kl~d~g~~~~~ 153 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA---NDLVKIGDLGISKVL 153 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec---CCcEEEeeccchhhh
Confidence 99 99999988652 35688999999998888 9999999999999 888876 677999999977543
No 363
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=5.8e-22 Score=148.45 Aligned_cols=130 Identities=18% Similarity=0.198 Sum_probs=99.0
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----------------------------CchhhHHHHHHHhcCCC
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----------------------------PQLHIESKIYKLMQGGV 63 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----------------------------~~~~~E~~~l~~l~~~~ 63 (227)
...||+|+||+||+|.+. +|+.||||+.+..... ....+|.+.+.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 468999999999999986 8999999998754210 01356889999998 77
Q ss_pred CCCeeEEccccCcEEEEEEeCC-CCCHHHH-HhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeecc
Q psy3118 64 GIPQIKWCGSEGDYNVMVMELL-GPSLEDL-FNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNI 134 (227)
Q Consensus 64 ~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~-~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~ 134 (227)
++.....+.... .++||||+ |+++... +. ...++..++..++.|++ +|+ .||+|||||| |+++.
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~--- 152 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH--- 152 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE---
Confidence 765443332222 38999999 6644333 33 35688889999999988 898 9999999999 88886
Q ss_pred CCCeeeEEeeeccccCC
Q psy3118 135 STGEEVAIKLECIKTRH 151 (227)
Q Consensus 135 ~~~~~~~~~~~~~~~~~ 151 (227)
+++.+++|||.+....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 4789999999887543
No 364
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.88 E-value=1.3e-21 Score=155.16 Aligned_cols=187 Identities=18% Similarity=0.220 Sum_probs=136.7
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhc--CCCCCCeeEEccccCcE-----
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDY----- 77 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~----- 77 (227)
|++.+.||+|+||.||+|.+..+++.+|+|.+...... ..+.+|+.++++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 68899999999999999999888999999998643222 24567888888875 49999999999887766
Q ss_pred EEEEEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.+++||+++++|.+++... ...+++..+..++.|++ +|+.|++|+||+| |++++. .+..++.|||.+...
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~---~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---DGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc---CCCEEEeccCcceec
Confidence 9999999977899988764 23689999999999998 9999999999999 888877 478999999977543
Q ss_pred CCchhhHHHHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 151 HPQLHIESKIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 151 ~~~~~~e~~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
........ ..++... |.. ..+. ......++|.+|..+++++.+. .+|+
T Consensus 158 ~~~~~~~~-----~~~~~~~~~PE~-~~~~-~~~~~~Di~s~G~~l~~l~~~~-~~~~ 207 (287)
T cd07838 158 SFEMALTS-----VVVTLWYRAPEV-LLQS-SYATPVDMWSVGCIFAELFRRR-PLFR 207 (287)
T ss_pred cCCccccc-----ccccccccChHH-hccC-CCCCcchhhhHHHHHHHHHhCC-Cccc
Confidence 21110000 0011100 111 1111 1112356788899999998763 3443
No 365
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.87 E-value=1e-21 Score=156.92 Aligned_cols=140 Identities=15% Similarity=0.144 Sum_probs=120.5
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
-++|++.+.||+|+||.||+|.+..+++.+|+|.+...... ..+.+|+.++.++.+|+||+++++++.++...+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 35789999999999999999999888999999998654322 245667777888777999999999999999999999
Q ss_pred eCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 83 ELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 83 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
||++++|.+++......+++..+..++.|++ +|+ .||+||||+| |++++. ++..++.|||.+.
T Consensus 94 e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~---~~~~kL~dfg~~~ 163 (296)
T cd06618 94 ELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA---SGNVKLCDFGISG 163 (296)
T ss_pred eccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC---CCCEEECccccch
Confidence 9998888888877556799999999999988 897 6999999999 999865 6789999999765
No 366
>KOG0579|consensus
Probab=99.87 E-value=7e-24 Score=176.27 Aligned_cols=183 Identities=15% Similarity=0.203 Sum_probs=144.1
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
+-|.++..||.|+||.||+|..+.++-..|-|++...+ ..+.+..|++||..+. ||+|+++++.|...+.+|+..||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEEEEee
Confidence 45788899999999999999999998888999875443 3456888999999998 99999999999999999999999
Q ss_pred C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 85 L-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 85 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
| ||-...++-..++.+++.++..+++|++ +|+++|||||||. ||++.. +|.+.+.|||-+..........
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl---dGdirLADFGVSAKn~~t~qkR 187 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL---DGDIRLADFGVSAKNKSTRQKR 187 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe---cCcEeeecccccccchhHHhhh
Confidence 9 8887777777688999999999999999 9999999999999 999987 7999999999654322211111
Q ss_pred HHHHHhhccCCCCCeeeecccc---------CCee-EEEeeccCCCHHHHHhHcC
Q psy3118 158 SKIYKLMQGGVGIPQIKWCGSE---------GDYN-VMVMELLGPSLEDLFNFCS 202 (227)
Q Consensus 158 ~~~y~~l~g~~g~p~~~~~g~~---------~~~~-~~vm~~lg~~l~~l~~~~~ 202 (227)
...-|+| ||..++ ..|. .-++|.||.+|-++-..-+
T Consensus 188 ----DsFIGTP-----YWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEP 233 (1187)
T KOG0579|consen 188 ----DSFIGTP-----YWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEP 233 (1187)
T ss_pred ----ccccCCc-----ccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCC
Confidence 1122433 454432 2222 3357999999888877643
No 367
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.87 E-value=8.4e-22 Score=155.26 Aligned_cols=131 Identities=15% Similarity=0.104 Sum_probs=106.1
Q ss_pred eecccCcceEEEEEEcCC--CcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CC
Q psy3118 14 KIGSGSFGDIYLGTNIST--GEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GP 87 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~--~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 87 (227)
.||+|+||.||++..... ...+++|....... ...+.+|+.+++.++ ||||+++++.+.+....++||||+ ++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCCCC
Confidence 689999999999975332 23566776544322 236788999999997 999999999999999999999999 99
Q ss_pred CHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 88 SLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 88 ~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+|.++++.. ...+++..+..++.|++ +|+.+++|||||| |++++. .+..++.|||.+.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~---~~~~~l~Dfg~~~ 147 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS---DLTVKVGDYGIGP 147 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC---CccEEeccccccc
Confidence 999998763 23456777788888887 9999999999999 888865 5779999999765
No 368
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.87 E-value=8.1e-22 Score=156.74 Aligned_cols=135 Identities=26% Similarity=0.296 Sum_probs=118.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
+|...+.||+|++|.||++.+..+++.+|+|...... ....+.+|+.+++.+. |+|++++++++..++..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEEecc
Confidence 5677789999999999999998899999999875432 2235778999999997 999999999999999999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+++|.+++.. .++++.++..++.|++ +|++|++||||+| |++++. .+..++.|||.+.
T Consensus 99 ~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~---~~~~~l~d~g~~~ 163 (285)
T cd06648 99 EGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS---DGRVKLSDFGFCA 163 (285)
T ss_pred CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC---CCcEEEcccccch
Confidence 9999999886 5789999999999988 9999999999999 888865 5788999998654
No 369
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.87 E-value=2.3e-22 Score=159.88 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=117.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++|+..+.||+|+||.||++.+..+++.+|+|.+..... ...+.+|+.++.++.+|+||+++++++..++..+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 357778899999999999999999999999998865432 23577899999999779999999999998889999999
Q ss_pred CCCCCHHHHHhh----CCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 84 LLGPSLEDLFNF----CSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 84 ~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
|++++|.++... ....+++..+..++.|++ +|+ .|++|||||| |++++. .+..++.|||.+.
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~---~~~~kl~dfg~~~ 156 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR---NGNIKLCDFGISG 156 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc---CCcEEEeecchhH
Confidence 997787766542 136799999999999988 786 5999999999 988876 5779999999775
No 370
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.87 E-value=6.4e-22 Score=159.04 Aligned_cols=140 Identities=18% Similarity=0.241 Sum_probs=120.2
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
...|+..+.||+|+||.||+|.+..++..+|+|.+..... ..++.+|+++++.++ |+|++++.+++..++..++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEE
Confidence 3468888999999999999999999999999998864321 124667999999997 9999999999999999999
Q ss_pred EEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||||+.++|.+++......+++.++..++.|++ +|+.|++|||||| |+++.. .+..++.|||.+..
T Consensus 93 v~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~---~~~~kl~dfg~~~~ 164 (308)
T cd06634 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE---PGLVKLGDFGSASI 164 (308)
T ss_pred EEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC---CCcEEECCccccee
Confidence 999997788888766556789999999999988 9999999999999 888865 57899999997764
No 371
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.87 E-value=5.9e-22 Score=158.11 Aligned_cols=133 Identities=25% Similarity=0.274 Sum_probs=115.2
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
+....||+|+||.||++....+++.+|+|...... ....+.+|+.+++.++ |+|++++++.+..++..+++|||+ +
T Consensus 23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEecCCC
Confidence 33467999999999999999999999999875432 2235788999999998 899999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
++|.+++.. ..+++..+..++.|++ +|+.|++|+|||| |++++. .+...+.|||.+.
T Consensus 102 ~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~---~~~~~l~dfg~~~ 164 (292)
T cd06657 102 GALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH---DGRVKLSDFGFCA 164 (292)
T ss_pred CcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---CCCEEEcccccce
Confidence 999998764 5689999999999998 9999999999999 988876 5678999999765
No 372
>KOG3653|consensus
Probab=99.87 E-value=3.8e-23 Score=166.26 Aligned_cols=185 Identities=19% Similarity=0.212 Sum_probs=139.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhc-CCCCCCeeEEccccCc----EEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQ-GGVGIPQIKWCGSEGD----YNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~-~~~~i~~~~~~~~~~~----~~~lv~ 82 (227)
.-++.+++|+|.||.||+|.. +++.||||+.+. ...+.+..|-+|+.... .|+||++++....... .++||+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~-~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE-QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred chhhHHHhhcCccceeehhhc--cCceeEEEecCH-HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 456788999999999999986 679999999854 44567888888888643 4999999988776655 799999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----c---------cccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----I---------TAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----l---------h~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
||. .|||.++++. ..+++.+...++..++ | |+++|+|||||. |+++.. +....+.|||+
T Consensus 288 ~fh~kGsL~dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~---DlTccIaDFGL 362 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN---DLTCCIADFGL 362 (534)
T ss_pred eeccCCcHHHHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc---CCcEEeeccce
Confidence 999 9999999996 6799999888887776 3 568999999999 888876 67789999998
Q ss_pred cccCCCc-------hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCC
Q psy3118 147 IKTRHPQ-------LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSR 203 (227)
Q Consensus 147 ~~~~~~~-------~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~ 203 (227)
+-...|. ....+.-|+.++--.| .+.+.+ .+-+..++|..+|-.+||+.++|+.
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEg--ainl~d-~~Afkr~DvYamgLVLWEi~SRC~~ 423 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEG--AINLQD-RDAFKRIDVYAMGLVLWEIASRCTD 423 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhh--hccccc-HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 7543332 2334445544322111 222322 3445567778889999999999854
No 373
>KOG0603|consensus
Probab=99.87 E-value=2.5e-22 Score=166.82 Aligned_cols=185 Identities=17% Similarity=0.166 Sum_probs=144.4
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.+.+.|.+...+|.|+|+.|-.+.+..+++..++|++.+. .....+|+.++....+|+||+++.+.+.++.+.|+|||
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 3567899999999999999999999999999999998665 33456799999999999999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
.+ |+-|.+.+.. ...++ .++..|+.|++ +|++|+||||+|| ||++.. ..+...++|||.++...+. .
T Consensus 397 ~l~g~ell~ri~~-~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~--~~g~lrltyFG~a~~~~~~--~ 470 (612)
T KOG0603|consen 397 LLDGGELLRRIRS-KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG--SAGHLRLTYFGFWSELERS--C 470 (612)
T ss_pred hccccHHHHHHHh-cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC--CCCcEEEEEechhhhCchh--h
Confidence 99 8877777765 34444 88888999988 9999999999999 888862 2788999999988765544 2
Q ss_pred HHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 157 ESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 157 e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
....|+. ++.....-+.++.....+.|.+|..|+++..++
T Consensus 471 ~tp~~t~-----~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~ 510 (612)
T KOG0603|consen 471 DTPALTL-----QYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR 510 (612)
T ss_pred cccchhh-----cccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence 2222322 222222223445555677788888888887664
No 374
>KOG4257|consensus
Probab=99.87 E-value=1.5e-22 Score=167.92 Aligned_cols=185 Identities=20% Similarity=0.274 Sum_probs=148.5
Q ss_pred EEEEeeecccCcceEEEEEEcCC--C--cEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNIST--G--EEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~--~--~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
-++.+.||.|-||.||.|..... | --||||..+.+. +.+.+..|..+|+.+. ||||+++++.+.+.. .|+|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfd-HphIikLIGv~~e~P-~Wiv 468 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFD-HPHIIKLIGVCVEQP-MWIV 468 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCC-Ccchhheeeeeeccc-eeEE
Confidence 45677899999999999987543 2 258999876643 3356888999999998 999999999988654 5999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
||++ -|.|..+++.+...++......++.|++ +|+..+|||||.. |+++.+ ..-+++.|||+++...
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---p~CVKLaDFGLSR~~e--- 542 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---PQCVKLADFGLSRYLE--- 542 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---cceeeecccchhhhcc---
Confidence 9999 9999999999888999999999999998 9999999999999 888876 4557899999998653
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCCee-----EEEeeccCCCHHHHHhHcCCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGDYN-----VMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~~~-----~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
+...|+.-.|. -.+.|..++.... .-+.|++|.=+||++...-++|.
T Consensus 543 --d~~yYkaS~~k---LPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfq 594 (974)
T KOG4257|consen 543 --DDAYYKASRGK---LPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQ 594 (974)
T ss_pred --ccchhhccccc---cceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccc
Confidence 23345554443 3678888775433 34469999999999887666663
No 375
>KOG1167|consensus
Probab=99.87 E-value=1.5e-22 Score=160.69 Aligned_cols=138 Identities=22% Similarity=0.351 Sum_probs=125.2
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcC---CCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNIS---TGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+.+.|.+++.||.|+|+.||++.+.. .++.||+|.+...+...++.+|+++|..+.++.||+.+.+++..++...+|
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv 113 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV 113 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence 45679999999999999999999876 778999999988888889999999999999999999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
+||. ..+..++... ++..++..+++.++ +|.+||||||||| |++.... +++-+++|||++.
T Consensus 114 lp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~--t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRR--TQRGVLVDFGLAQ 181 (418)
T ss_pred ecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccc--cCCceEEechhHH
Confidence 9999 7787777765 67888888888887 9999999999999 8888776 8899999999886
No 376
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.87 E-value=9.9e-22 Score=152.89 Aligned_cols=130 Identities=22% Similarity=0.262 Sum_probs=114.6
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
||+|+||.||++.+..+++.+|+|.+...... ..+..|+.+++.++ |+|++++++.+..++..+++||++ +++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 69999999999999888999999998664322 36788999999998 999999999999999999999999 999
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
|.+++.. ...+++.++..++.|++ +|+.|++|+||+| |++++. .+..++.||+.+..
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~---~~~~~l~d~~~~~~ 142 (250)
T cd05123 80 LFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA---DGHIKLTDFGLAKE 142 (250)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC---CCcEEEeecCccee
Confidence 9999987 45789999999999998 9999999999999 888766 56789999997653
No 377
>KOG1290|consensus
Probab=99.87 E-value=1.3e-21 Score=158.18 Aligned_cols=131 Identities=23% Similarity=0.313 Sum_probs=113.4
Q ss_pred ceec-CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCC-------CCCCeeEEccc
Q psy3118 3 LRVG-NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGG-------VGIPQIKWCGS 73 (227)
Q Consensus 3 ~~~~-~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~-------~~i~~~~~~~~ 73 (227)
..|+ +||.+.++||.|.|++||+|.|..+.+.||+|+.+..+. .+....||.+|+.++.+ ..||+|++.|.
T Consensus 73 D~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 73 DVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred ccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 3455 899999999999999999999999999999999876543 34567799999998743 36999988876
Q ss_pred ----cCcEEEEEEeCCCCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeec
Q psy3118 74 ----EGDYNVMVMELLGPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 74 ----~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~ 133 (227)
++.+.++|+|++|.+|..++... -+.++...+++|++|++ ||+ .||||-|||| |+++..+
T Consensus 153 hsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 153 HSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred ecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 46689999999999999999876 45799999999999999 885 6999999999 9998876
No 378
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.87 E-value=5.4e-22 Score=156.17 Aligned_cols=136 Identities=17% Similarity=0.196 Sum_probs=112.1
Q ss_pred eeecccCcceEEEEEEcCCC------cEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 13 RKIGSGSFGDIYLGTNISTG------EEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~------~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+.||+|+||.||+|.+.... ..+|+|.+.... ....+.+|+.+++.++ ||||+++++++..++..+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEEEe
Confidence 36899999999999976433 689999875432 2346788999999998 9999999999999899999999
Q ss_pred CC-CCCHHHHHhhC------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeecc--CCCeeeEEeeeccc
Q psy3118 84 LL-GPSLEDLFNFC------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNI--STGEEVAIKLECIK 148 (227)
Q Consensus 84 ~~-~~~L~~~~~~~------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~--~~~~~~~~~~~~~~ 148 (227)
|+ +++|.+++... ...+++.++..++.|++ +|+.+++|+|||| |++++.+. .....++.|||.+.
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99 99999998752 23478899999999987 9999999999999 98887743 12368899999775
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 160 ~ 160 (269)
T cd05044 160 D 160 (269)
T ss_pred c
Confidence 3
No 379
>KOG0669|consensus
Probab=99.87 E-value=1.2e-24 Score=162.74 Aligned_cols=193 Identities=17% Similarity=0.171 Sum_probs=141.2
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEcccc------
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSE------ 74 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~------ 74 (227)
..+.|.-...+|+|.||.||+|+.+.+|+.||+|.+-..... ....+|+.+|+.|+ |+|++.+++.+..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPTN 93 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcc
Confidence 355678888999999999999999999999999875443222 24678999999999 9999998766542
Q ss_pred --CcEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 75 --GDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 75 --~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
...+|+||++|..+|.-++.....+++..++..++.+++ +|+..|+|||+|| |++++. .|..++.|||.
T Consensus 94 r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~---dgilklADFGl 170 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK---DGILKLADFGL 170 (376)
T ss_pred cccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC---CceEEeecccc
Confidence 346899999999999999998667899999999999998 9999999999999 888876 68899999998
Q ss_pred cccCCCchhhHHHHHHhh-ccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 147 IKTRHPQLHIESKIYKLM-QGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 147 ~~~~~~~~~~e~~~y~~l-~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
++..+........-|+-- ..-+.-|.-...|..+...-+++|--|+.+.+++.+.
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrs 226 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRS 226 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccC
Confidence 864322111000001100 0001112222234444455677777788888888764
No 380
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.86 E-value=4.7e-22 Score=155.79 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=114.8
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-------CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-------RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
||.+.+.||+|+||.||++.+..++..+++|+.+... ....+.+|+.++++++ |||++++++++.+.+..++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 6899999999999999999998777777777654321 1124567899999997 9999999999999899999
Q ss_pred EEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 81 VMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++||+ +++|.+++... ...+++.++..++.|++ +|+.|++|+|||| |+++.. +..++.|||.+..
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~----~~~~l~d~g~~~~ 154 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN----NLLKIGDFGVSRL 154 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec----CCEeecccCceee
Confidence 99999 99999988642 45799999999999998 9999999999999 888753 4588999997653
No 381
>KOG0196|consensus
Probab=99.86 E-value=1.5e-22 Score=171.39 Aligned_cols=188 Identities=14% Similarity=0.235 Sum_probs=145.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCc---EEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGE---EVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~---~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
.-++.++||.|.||.|++|+.+..|+ .||||.++... .+..|..|+.||-... ||||++|.++....+...+|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeEEE
Confidence 45789999999999999999877664 69999997653 3346889999999998 99999999999999999999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCch
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (227)
+||| +|+|..+|+.+.+.|+..+...+.+.|+ |-+.|+|||||.. ||+++. +-..++.|||+++....
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs---nLvCKVsDFGLSRvled-- 783 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLED-- 783 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc---ceEEEeccccceeeccc--
Confidence 9999 9999999999888899999999999998 8999999999999 999987 45688999999984321
Q ss_pred hhHHHHHHhhccCCCCCeeeeccccCC-----eeEEEeeccCCCHHHHHhHcCCCC
Q psy3118 155 HIESKIYKLMQGGVGIPQIKWCGSEGD-----YNVMVMELLGPSLEDLFNFCSRRF 205 (227)
Q Consensus 155 ~~e~~~y~~l~g~~g~p~~~~~g~~~~-----~~~~vm~~lg~~l~~l~~~~~~~f 205 (227)
+. ...|+...|.. .+-|..++-. ...-+.|.+|..+||..+.-.+++
T Consensus 784 d~-~~~ytt~GGKI---PiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 784 DP-EAAYTTLGGKI---PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred CC-CccccccCCcc---ceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 11 23445444422 4556655421 112334555555555554433433
No 382
>KOG1094|consensus
Probab=99.86 E-value=4.5e-22 Score=163.92 Aligned_cols=191 Identities=17% Similarity=0.223 Sum_probs=143.7
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
++..+++.||+|.||.|.+|.- ..+..||+|.++..... ..|.+|+++|.+|+ ||||+.+.+++..++.+++++|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchHHHHH
Confidence 4567889999999999999984 44689999999765432 46899999999997 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCC-cCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 84 LL-GPSLEDLFNFCSRR-FSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~-~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+ .|+|.+++.....+ +.-.....|+.||+ |.+.++||||+.| |++++. ....++.|||.++......
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~---e~~iKiadfgmsR~lysg~- 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDG---EFTIKIADFGMSRNLYSGD- 691 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecC---cccEEecCcccccccccCC-
Confidence 99 99999999975222 24444556888887 8999999999999 888776 6789999999887432211
Q ss_pred hHHHHHHhhccCCCCCeeeecccc-----CCeeEEEeeccCCCHHHHHhHc-CCCCCHHH
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSE-----GDYNVMVMELLGPSLEDLFNFC-SRRFSLKT 209 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~-----~~~~~~vm~~lg~~l~~l~~~~-~~~f~~~~ 209 (227)
|-..+|. .+-.+-|..-+ +-...-+.|.+|.++||+|..| .++|+-.+
T Consensus 692 -----yy~vqgr-~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt 745 (807)
T KOG1094|consen 692 -----YYRVQGR-AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT 745 (807)
T ss_pred -----ceeeecc-eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence 1112332 12233343322 1112345788999999999999 67886433
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.86 E-value=2.3e-21 Score=150.14 Aligned_cols=123 Identities=11% Similarity=0.036 Sum_probs=105.4
Q ss_pred cCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhC
Q psy3118 18 GSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFC 96 (227)
Q Consensus 18 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~ 96 (227)
|.+|.||+|.+..+++.+|+|.+..... ..+|...+.... |||++++++++.+.+..+++|||+ |++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---YSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh---hhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-
Confidence 8899999999999999999999865432 334555555555 899999999999999999999999 9999999877
Q ss_pred CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 97 SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 97 ~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
...+++.++..++.|++ +|++||+|||||| |++++. ++...+.||+.+.
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~~l~df~~~~ 133 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD---RGHIQLTYFSRWS 133 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC---CCCEEEecccchh
Confidence 45699999999999988 9999999999999 988876 5778999998654
No 384
>KOG0614|consensus
Probab=99.86 E-value=5e-24 Score=172.91 Aligned_cols=206 Identities=17% Similarity=0.116 Sum_probs=152.2
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+.+.+..||-||||.|-++.-......+|+|++++.. ..+.+..|-.||...+ .|.|+++|-.+.++.+.|+.|
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhH
Confidence 5677889999999999999875555569999887642 2345788999999998 899999999999999999999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|-| ||.|+..++. ++.|+..+++.++..++ ||++|||.||||| |.+++. +|-.+++|||.++.....-.
T Consensus 500 EaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~---~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 500 EACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN---RGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc---CCceEEeehhhHHHhccCCc
Confidence 999 9999999998 68899999998888777 9999999999999 888887 78899999998874322111
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHHHHHHHHHhhhc
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLFLYNTRL 224 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l~~ql~~~~~~~ 224 (227)
+| ...|||.+..+.-.-..+.....+.|.||--..||..+ .++|+...=...-.+|+.=++.|
T Consensus 576 --Tw---TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G-~pPFs~~dpmktYn~ILkGid~i 638 (732)
T KOG0614|consen 576 --TW---TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTG-SPPFSGVDPMKTYNLILKGIDKI 638 (732)
T ss_pred --ee---eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcC-CCCCCCCchHHHHHHHHhhhhhh
Confidence 11 12454433222222223334455678888888888887 46665444344444444433333
No 385
>KOG0695|consensus
Probab=99.86 E-value=2.1e-22 Score=156.56 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=127.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec-----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
-++|.++++||+|+|++|.+++.+.|.+.+|+|++++. .+.++.+.|..++...++||.++-+..++++...+|+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 35799999999999999999999999999999998663 3456788999999999999999999999999999999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|.||+ ||+|.-.++. +++++++.++.+..+|+ +|++|||.||||. |++++. .|..++.|+|..+..
T Consensus 329 vieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda---eghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA---EGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc---CCceeecccchhhcC
Confidence 99999 9999877776 67899999999998887 8999999999999 888887 799999999977644
No 386
>KOG0983|consensus
Probab=99.86 E-value=1.4e-22 Score=153.37 Aligned_cols=184 Identities=15% Similarity=0.071 Sum_probs=139.9
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.+.+..||.|+-|+|++++.+.+|...|||.+.+.... +++...+.++.+-.+.|.||+.++++..+...++.||.+
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 35567799999999999999999999999999876543 456667788777767899999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc------ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS------ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~------lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
+..+..+++...+++++.-+-.+...+. -.+.||||||+|| ||+++. .|.++++|||.+...- ++
T Consensus 174 s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe---~GniKlCDFGIsGrlv-----dS 245 (391)
T KOG0983|consen 174 STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE---RGNIKLCDFGISGRLV-----DS 245 (391)
T ss_pred HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc---CCCEEeecccccceee-----cc
Confidence 8888899888778888888777776665 3467999999999 888887 8999999999876332 22
Q ss_pred HHHHhhccCCCCCeeeeccccCCeeEE---EeeccCCCHHHHHhH
Q psy3118 159 KIYKLMQGGVGIPQIKWCGSEGDYNVM---VMELLGPSLEDLFNF 200 (227)
Q Consensus 159 ~~y~~l~g~~g~p~~~~~g~~~~~~~~---vm~~lg~~l~~l~~~ 200 (227)
..-+.-.|++.+....-..+.+...|- ..|.||.++.+|-.+
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg 290 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATG 290 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcc
Confidence 222222344433333333344333333 369999999998654
No 387
>KOG0199|consensus
Probab=99.85 E-value=1.6e-22 Score=169.64 Aligned_cols=197 Identities=16% Similarity=0.195 Sum_probs=149.4
Q ss_pred CeEEEEeeecccCcceEEEEEEcCC-Cc--EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNIST-GE--EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~-~~--~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
+..++.+.||+|.||.|++|.+... |+ .||||++..+.. .+.|.+|+.+|.+|+ |+|++++|+...+ ....+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~mM 187 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPAMM 187 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chhhH
Confidence 3456778999999999999998643 33 689999876543 357999999999999 9999999999887 66789
Q ss_pred EEeCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 81 VMELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
|||++ .|||.|.+++. ...|-......++.||+ |.++++|||||.. |+++.+ ...+++.|||+.+....
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas---prtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS---PRTVKICDFGLMRALGE 264 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---cceeeeecccceeccCC
Confidence 99999 99999999983 66788999999999998 8999999999999 999987 67789999999886543
Q ss_pred chhhHHHHHHhhccCCCCCeeeeccccCC-----eeEEEeeccCCCHHHHHhHcCCCC---CHHHHHHHH
Q psy3118 153 QLHIESKIYKLMQGGVGIPQIKWCGSEGD-----YNVMVMELLGPSLEDLFNFCSRRF---SLKTVLLLA 214 (227)
Q Consensus 153 ~~~~e~~~y~~l~g~~g~p~~~~~g~~~~-----~~~~vm~~lg~~l~~l~~~~~~~f---~~~~~l~l~ 214 (227)
..+ .| .+.+-.- -.+-|-.++.- ...-+.|++|.++||+|.+-..++ ....++..+
T Consensus 265 ned----~Y-vm~p~rk-vPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i 328 (1039)
T KOG0199|consen 265 NED----MY-VMAPQRK-VPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI 328 (1039)
T ss_pred CCc----ce-EecCCCc-CcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc
Confidence 221 12 1111111 13445444422 224567999999999998864444 334444433
No 388
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.85 E-value=3.6e-21 Score=151.00 Aligned_cols=137 Identities=21% Similarity=0.279 Sum_probs=114.8
Q ss_pred EEEeeecccCcceEEEEEEc----CCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 10 RLGRKIGSGSFGDIYLGTNI----STGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~----~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
++.+.||.|+||.||+|... ..+..|+||.+..... .+.+.+|++.+++++ ||||+++++++...+..++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc-ccccccccccccccccccccc
Confidence 57889999999999999987 3456899999854322 346888999999996 999999999999888899999
Q ss_pred eCC-CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 83 ELL-GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 83 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
||+ +++|.+++... ...+++.+...++.|++ +|+++++|+||+| |++++. .+..++.||+.+...
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~---~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS---NGQVKLSDFGLSRPI 153 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET---TTEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccc
Confidence 999 89999999985 56899999999999998 9999999999999 888877 678999999876543
No 389
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.85 E-value=3.2e-21 Score=152.05 Aligned_cols=137 Identities=13% Similarity=0.213 Sum_probs=110.5
Q ss_pred EEEEeeecccCcceEEEEEEcC---CCcEEEEEEeeecCCC----CchhhHHHHHHHhcCCCCCCeeEEccccCc-----
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNIS---TGEEVAIKLECIKTRH----PQLHIESKIYKLMQGGVGIPQIKWCGSEGD----- 76 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~---~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~----- 76 (227)
|++.+.||+|+||.||+|.+.. +++.+|+|....+... +.+.+|+.+++.++ |||++++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCcc
Confidence 6778899999999999998643 5689999988654322 35778999999998 999999998775432
Q ss_pred -EEEEEEeCC-CCCHHHHHhhC-----CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEe
Q psy3118 77 -YNVMVMELL-GPSLEDLFNFC-----SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIK 143 (227)
Q Consensus 77 -~~~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~ 143 (227)
..++++||+ +++|.+++... ...+++..+..++.|++ +|++||+|||||| |+++.. .+..++.|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~---~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE---NMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC---CCCEEECc
Confidence 357889999 99998886532 12578888999999988 9999999999999 888865 56788999
Q ss_pred eecccc
Q psy3118 144 LECIKT 149 (227)
Q Consensus 144 ~~~~~~ 149 (227)
||.+..
T Consensus 157 fg~~~~ 162 (273)
T cd05074 157 FGLSKK 162 (273)
T ss_pred cccccc
Confidence 997763
No 390
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=1.1e-20 Score=143.44 Aligned_cols=137 Identities=11% Similarity=0.090 Sum_probs=105.3
Q ss_pred CceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-C----------chhhHHHHHHHhcCCCCCCeeEE
Q psy3118 2 ELRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-P----------QLHIESKIYKLMQGGVGIPQIKW 70 (227)
Q Consensus 2 ~~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~----------~~~~E~~~l~~l~~~~~i~~~~~ 70 (227)
+..+.++|.+.+.+|.|+||.||++.+ ++..+|+|+....... + .+.+|+..+.++. |++|+.+.+
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d 102 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLND 102 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceE
Confidence 346789999999999999999999765 5678999998643221 1 1578999999997 999999988
Q ss_pred ccccC--------cEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCee
Q psy3118 71 CGSEG--------DYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 71 ~~~~~--------~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
++... +..+++|||+ |.+|.++.. +++.....++..+. +|+.|++|||+|| |+++.. .+ .
T Consensus 103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~---~g-i 173 (232)
T PRK10359 103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISEDVKAKIKASIESLHQHGMVSGDPHKGNFIVSK---NG-L 173 (232)
T ss_pred eeeecccccccccCCeEEEEEEECCccHHHhhh-----ccHHHHHHHHHHHHHHHHcCCccCCCChHHEEEeC---CC-E
Confidence 75532 3579999999 889987632 34444444444444 9999999999999 988865 45 9
Q ss_pred eEEeeeccccC
Q psy3118 140 VAIKLECIKTR 150 (227)
Q Consensus 140 ~~~~~~~~~~~ 150 (227)
+++|||.....
T Consensus 174 ~liDfg~~~~~ 184 (232)
T PRK10359 174 RIIDLSGKRCT 184 (232)
T ss_pred EEEECCCcccc
Confidence 99999977644
No 391
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=1.6e-20 Score=141.77 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=97.7
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecC--CCCchhhHHHHHHHhc----CCCCCCeeEEccccCc---E-EEEE
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT--RHPQLHIESKIYKLMQ----GGVGIPQIKWCGSEGD---Y-NVMV 81 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~---~-~~lv 81 (227)
.+.||+|+||.||. +..++.. +||++.... ....+.+|+.+++.+. .||||++++++++++. . ..+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 57899999999995 6667666 699876532 2346899999999995 3799999999999863 4 4478
Q ss_pred EeC--C-CCCHHHHHhhCCCCcCHHHHHHHHHHhc------ccccceeccCCee-eEEEeecc-CCCeeeEEeeecc
Q psy3118 82 MEL--L-GPSLEDLFNFCSRRFSLKTVLLLADQLS------ITAPGIIDQEQKS-VMVVGTNI-STGEEVAIKLECI 147 (227)
Q Consensus 82 ~e~--~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~------lh~~~iiHrDlkp-ni~l~~~~-~~~~~~~~~~~~~ 147 (227)
+|| + +++|.++++. ..+++.. .++.|++ +|+++|||||||| |+++.... .....+++|+.-+
T Consensus 84 ~e~~G~~~~tL~~~l~~--~~~~e~~--~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ--CRYEEDV--AQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred ecCCCCcchhHHHHHHc--ccccHhH--HHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 999 5 5899999976 3466552 3334433 8999999999999 99997643 2357999994433
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.85 E-value=1.1e-20 Score=172.97 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=102.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-C
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-G 86 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 86 (227)
.+...+.||+|+||.||+|.+..++..||+|.+..... ....|++++++++ ||||+++++++.+++..++||||+ +
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEEEeCCCC
Confidence 45667789999999999999988999999998754322 2346799999997 999999999999999999999999 9
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----cc---ccceeccCCee-eEEEeec
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----IT---APGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh---~~~iiHrDlkp-ni~l~~~ 133 (227)
++|.++++. +++.++..++.|++ +| +++|+|||+|| |++++.+
T Consensus 768 g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~ 819 (968)
T PLN00113 768 KNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK 819 (968)
T ss_pred CcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC
Confidence 999999863 78889999999988 88 77999999999 8888653
No 393
>KOG0584|consensus
Probab=99.85 E-value=2.7e-22 Score=166.26 Aligned_cols=159 Identities=21% Similarity=0.229 Sum_probs=126.7
Q ss_pred CeE-EEEeeecccCcceEEEEEEcCCCcEEEEEEeee------cCCCCchhhHHHHHHHhcCCCCCCeeEEccccCc--E
Q psy3118 7 NKY-RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECI------KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD--Y 77 (227)
Q Consensus 7 ~~y-~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~------~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--~ 77 (227)
+|| +....||+|+|-+||+|.|..+|-.||--.++. ....+++..|+++|+.|+ |+||+++|+++.+.. .
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKT 117 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCce
Confidence 454 557899999999999999999998888443322 123368999999999999 999999999988754 4
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----cc--ccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----IT--APGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh--~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
..+|+|++ .|+|..|+++. ++++...+..|++||+ || .+.|||||||- ||++.-+ .|.+++-|+|+++
T Consensus 118 in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~--~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN--LGEVKIGDLGLAT 194 (632)
T ss_pred eeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC--cCceeecchhHHH
Confidence 99999999 99999999984 7899999999999999 65 57899999999 8888765 7999999999987
Q ss_pred cCCCchhhHHHHHHhhccCCCCCeeee
Q psy3118 149 TRHPQLHIESKIYKLMQGGVGIPQIKW 175 (227)
Q Consensus 149 ~~~~~~~~e~~~y~~l~g~~g~p~~~~ 175 (227)
..... .++.+-|||.+..+..
T Consensus 195 l~r~s------~aksvIGTPEFMAPEm 215 (632)
T KOG0584|consen 195 LLRKS------HAKSVIGTPEFMAPEM 215 (632)
T ss_pred Hhhcc------ccceeccCccccChHH
Confidence 44221 2233446665544433
No 394
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.85 E-value=4.1e-21 Score=154.59 Aligned_cols=126 Identities=17% Similarity=0.113 Sum_probs=106.4
Q ss_pred CcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHHHH
Q psy3118 19 SFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDLF 93 (227)
Q Consensus 19 ~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~ 93 (227)
++|.||.+.+..+++.+|+|.+.... ....+.+|+++++.++ |+||+++++++.+++..+++|||+ +++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 44556666666799999999986542 1236888999999998 999999999999999999999999 89999999
Q ss_pred hhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 94 NFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 94 ~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
... ...+++..+..++.|++ +|+.||+|||||| |++++. .+..++.||+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~---~~~~kl~d~~~~~ 149 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG---DGKVVLSGLRYSV 149 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec---CCceEEecCccce
Confidence 864 45689999999999988 9999999999999 888875 5778888988654
No 395
>KOG4278|consensus
Probab=99.84 E-value=1.3e-21 Score=162.53 Aligned_cols=182 Identities=19% Similarity=0.250 Sum_probs=146.3
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
+.....+||-|.||.||.|.++.-...||||.++.+. ..+.|..|..+|+.++ |||+|++.++|.....+|||+||+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEeccc
Confidence 3466788999999999999999999999999986543 3457899999999998 999999999999999999999999
Q ss_pred CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 86 GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 86 ~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
.|+|.|+++.. +..++.-..+.++.||. |..+++|||||.. |.+++. ..-+++.|||+++-+..
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgE---nhiVKvADFGLsRlMtg------ 417 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE---NHIVKVADFGLSRLMTG------ 417 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccc---cceEEeeccchhhhhcC------
Confidence 99999999987 34567777788999998 8999999999999 999988 56788999999875432
Q ss_pred HHHHhhccCCCCCeeeeccccCC-eeE----EEeeccCCCHHHHHhHc
Q psy3118 159 KIYKLMQGGVGIPQIKWCGSEGD-YNV----MVMELLGPSLEDLFNFC 201 (227)
Q Consensus 159 ~~y~~l~g~~g~p~~~~~g~~~~-~~~----~vm~~lg~~l~~l~~~~ 201 (227)
.-|+.-.|.. -.+.|..++.- |+. -+.|.+|.-|||+-...
T Consensus 418 DTYTAHAGAK--FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYG 463 (1157)
T KOG4278|consen 418 DTYTAHAGAK--FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYG 463 (1157)
T ss_pred CceecccCcc--CcccccCcccccccccccchhhHHHHHHHHHHHhcC
Confidence 2344444533 35677777643 221 23588888888876553
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3.6e-20 Score=156.32 Aligned_cols=141 Identities=14% Similarity=0.201 Sum_probs=104.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEc----------------CCCcEEEEEEeeecCC----------------CCchhhHH
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI----------------STGEEVAIKLECIKTR----------------HPQLHIES 53 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~----------------~~~~~~aiK~~~~~~~----------------~~~~~~E~ 53 (227)
.++|.+.+.||+|+||.||+|.+. ..++.||||.+..... .+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999752 2346799998754321 12234577
Q ss_pred HHHHHhcCCCC----CCeeEEcccc--------CcEEEEEEeCC-CCCHHHHHhhCC-----------------------
Q psy3118 54 KIYKLMQGGVG----IPQIKWCGSE--------GDYNVMVMELL-GPSLEDLFNFCS----------------------- 97 (227)
Q Consensus 54 ~~l~~l~~~~~----i~~~~~~~~~--------~~~~~lv~e~~-~~~L~~~~~~~~----------------------- 97 (227)
..+.++++++. ++.+.+++.. .+..++|+||+ +++|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77888874332 3455555432 35689999999 999999886421
Q ss_pred CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 98 RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 98 ~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
..+++..+..++.|++ +|+.+|+|||||| |+++.. .+..++.|||.+..
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~---~~~~kL~DFGla~~ 358 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVD 358 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC---CCcEEEEeCcCccc
Confidence 1235667888888887 9999999999999 888876 56799999998753
No 397
>KOG2052|consensus
Probab=99.84 E-value=3.7e-20 Score=148.24 Aligned_cols=136 Identities=23% Similarity=0.326 Sum_probs=113.3
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHH--hcCCCCCCeeEEccccCc----E
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKL--MQGGVGIPQIKWCGSEGD----Y 77 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~--l~~~~~i~~~~~~~~~~~----~ 77 (227)
.++..-++.+.||+|.||+||+|.+ .|+.||||+.... +...+.+|.+|.+. |+ |+||..++.....++ .
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr-dE~SWfrEtEIYqTvmLR-HENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR-DERSWFRETEIYQTVMLR-HENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc-chhhhhhHHHHHHHHHhc-cchhhhhhhccccCCCceEE
Confidence 3566788999999999999999998 6889999998553 33467889999885 56 999999987665443 4
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----cc--------ccceeccCCee-eEEEeeccCCCeeeEE
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----IT--------APGIIDQEQKS-VMVVGTNISTGEEVAI 142 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh--------~~~iiHrDlkp-ni~l~~~~~~~~~~~~ 142 (227)
+|||++|- .|||.|+++. ..++....+.++..++ || ++.|.|||||. ||++.+ ++...+.
T Consensus 284 LwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk---n~~C~IA 358 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK---NGTCCIA 358 (513)
T ss_pred EEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc---CCcEEEe
Confidence 99999999 9999999997 6788888888887776 44 46899999999 888877 6889999
Q ss_pred eeeccc
Q psy3118 143 KLECIK 148 (227)
Q Consensus 143 ~~~~~~ 148 (227)
|+|++-
T Consensus 359 DLGLAv 364 (513)
T KOG2052|consen 359 DLGLAV 364 (513)
T ss_pred eceeeE
Confidence 999874
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.83 E-value=3.2e-20 Score=159.72 Aligned_cols=137 Identities=17% Similarity=0.267 Sum_probs=97.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCC----CcEEEEEEeeecCCCCchhhHHHHHHHhcC--CCCCCeeEEc------cc
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNIST----GEEVAIKLECIKTRHPQLHIESKIYKLMQG--GVGIPQIKWC------GS 73 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~----~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~--~~~i~~~~~~------~~ 73 (227)
.++|.+.+.||+|+||.||+|.+..+ +..||+|.+...... |.....++.+ +.++..+... ..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNERVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHHHHHhhchhhHHHHHHhhhcccccc
Confidence 46899999999999999999999888 899999987543222 2222222220 2222222111 24
Q ss_pred cCcEEEEEEeCC-CCCHHHHHhhCCCCc-------------------CHHHHHHHHHHhc-----ccccceeccCCee-e
Q psy3118 74 EGDYNVMVMELL-GPSLEDLFNFCSRRF-------------------SLKTVLLLADQLS-----ITAPGIIDQEQKS-V 127 (227)
Q Consensus 74 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~-------------------~~~~~~~i~~qi~-----lh~~~iiHrDlkp-n 127 (227)
.+...++|+||+ +++|.+++....... ....+..++.|++ +|++||+|||||| |
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 566789999999 999999987532111 1234556888887 9999999999999 9
Q ss_pred EEEeeccCCCeeeEEeeecccc
Q psy3118 128 MVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 128 i~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++++.+ .+..++.|||.++.
T Consensus 286 ILl~~~--~~~~KL~DFGlA~~ 305 (566)
T PLN03225 286 IIFSEG--SGSFKIIDLGAAAD 305 (566)
T ss_pred EEEeCC--CCcEEEEeCCCccc
Confidence 998754 56899999998863
No 399
>KOG1006|consensus
Probab=99.83 E-value=1.4e-21 Score=147.36 Aligned_cols=183 Identities=15% Similarity=0.096 Sum_probs=131.1
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCCC
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLG 86 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 86 (227)
+-+..||.|+||+|++-.++.+|+..|||.++.... ..++..|.++..+-.+.|+||++|+..-..+..|+-||++.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 445679999999999999999999999999977543 34788899998888889999999998887777899999998
Q ss_pred CCHHHHHhhC----CCCcCHHHHHHHHHHhc------ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 87 PSLEDLFNFC----SRRFSLKTVLLLADQLS------ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 87 ~~L~~~~~~~----~~~~~~~~~~~i~~qi~------lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
-||..+.+.. +.++++.-+-.|+..+. -....|||||+|| ||+++. .|.++++|||.+...-
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr---~G~vKLCDFGIcGqLv---- 219 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR---HGDVKLCDFGICGQLV---- 219 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec---CCCEeeecccchHhHH----
Confidence 8887765532 45677766555554443 2356899999999 999988 8999999999775321
Q ss_pred hHHHHHHhhccCCCCCeeeeccccCC-ee-EEEeeccCCCHHHHHhH
Q psy3118 156 IESKIYKLMQGGVGIPQIKWCGSEGD-YN-VMVMELLGPSLEDLFNF 200 (227)
Q Consensus 156 ~e~~~y~~l~g~~g~p~~~~~g~~~~-~~-~~vm~~lg~~l~~l~~~ 200 (227)
++..-+.=.|+..+..+.-..+.+. |. --..|.||-+|.|+-++
T Consensus 220 -~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 220 -DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred -HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 1111111123332222222223332 22 23468999998888776
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.82 E-value=8.8e-20 Score=139.39 Aligned_cols=200 Identities=25% Similarity=0.326 Sum_probs=144.2
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
|.+.+.||.|++|.||++.+..+++.+|+|...... ..+.+.+|++.+++++ |+|++++++++......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEecc
Confidence 578899999999999999998889999999986543 2456788999999997 899999999999888999999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
+++|.+++......+++..+..++.|++ +|+.|++|+|++| |++++. .+..+++||+.+.........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---~~~~~l~d~g~~~~~~~~~~~-- 154 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---DGLVKLADFGLARFIHRDLAA-- 154 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEeeCceeeEecCcccc--
Confidence 7799999987422288999999999887 8999999999999 888876 478999999977643221100
Q ss_pred HHHHhhccCCCC--CeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCH--HHHHHHHHHH
Q psy3118 159 KIYKLMQGGVGI--PQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL--KTVLLLADQL 217 (227)
Q Consensus 159 ~~y~~l~g~~g~--p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~--~~~l~l~~ql 217 (227)
......+.... |.... +........+++.+|..+.+++.+ ..+|+. .....+.+++
T Consensus 155 -~~~~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g-~~pf~~~~~~~~~~~~~~ 214 (225)
T smart00221 155 -LLKTVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWG-PEPFSGEGEFTSLLSDVW 214 (225)
T ss_pred -cccceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHC-CCCccccchhHHHHHHHH
Confidence 00000111100 11110 111222245677889888999885 566654 3333444443
No 401
>KOG0576|consensus
Probab=99.82 E-value=2e-21 Score=162.09 Aligned_cols=194 Identities=19% Similarity=0.273 Sum_probs=146.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.++|.++..+|+|+||.||+|+++.+++..|+|+++.... ....+.|+-+++..+ |+||+.+++.+..++..|+.||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~-h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC-CcChHHHHhhhhhhcCcEEEEE
Confidence 3579999999999999999999999999999999876533 345778999999998 9999999999999999999999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHI 156 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (227)
|| ||+|+|...- .+++++.++....+..+ +|++|=+|||||- |+++.. .|.+++-|||.+......+..
T Consensus 93 ycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd---~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 93 YCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD---EGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred ecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecc---cCceeecccCchhhhhhhhhh
Confidence 99 9999998776 68999999999999888 9999999999999 888876 789999999976543332221
Q ss_pred HHHHHHhhccCCCC--CeeeeccccCCee-EEEeeccCCCHHHHHhHcCCCCCHH
Q psy3118 157 ESKIYKLMQGGVGI--PQIKWCGSEGDYN-VMVMELLGPSLEDLFNFCSRRFSLK 208 (227)
Q Consensus 157 e~~~y~~l~g~~g~--p~~~~~g~~~~~~-~~vm~~lg~~l~~l~~~~~~~f~~~ 208 (227)
... .-|++.- |.+-..+..+.|+ ...+|.+|-+--++-+-.+.-|++.
T Consensus 169 rks----fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 169 RKS----FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred hhc----ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 111 1233210 1111122234444 4456777766555554445556544
No 402
>KOG1027|consensus
Probab=99.81 E-value=7.2e-21 Score=162.14 Aligned_cols=140 Identities=16% Similarity=0.186 Sum_probs=110.0
Q ss_pred EEEEeeecccCcce-EEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCCCC
Q psy3118 9 YRLGRKIGSGSFGD-IYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGP 87 (227)
Q Consensus 9 y~~~~~lg~G~fg~-V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (227)
|.-.+.+|.|+-|+ ||+|.. .|+.||||.+-. ...+.+.+|+..|+.-..||||+++++...++.+.|+..|.|..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~-e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~ 587 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE-EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC 587 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh-HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence 44567789999886 899987 889999998733 33446788999999999999999999999999999999999999
Q ss_pred CHHHHHhhC--C----C-CcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccC--CCeeeEEeeeccccCC
Q psy3118 88 SLEDLFNFC--S----R-RFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNIS--TGEEVAIKLECIKTRH 151 (227)
Q Consensus 88 ~L~~~~~~~--~----~-~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~--~~~~~~~~~~~~~~~~ 151 (227)
+|.|++... . . ...+....+++..++ ||+.+|||||||| ||++..... +.+.++.|||+++...
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 999999872 1 1 111233334444444 9999999999999 999887533 3567888999887543
No 403
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=1.3e-19 Score=139.88 Aligned_cols=133 Identities=20% Similarity=0.204 Sum_probs=101.9
Q ss_pred eEEEEeeecccCcceEEEEE-EcCCCcEEEEEEeeecCCC--------------------------CchhhHHHHHHHhc
Q psy3118 8 KYRLGRKIGSGSFGDIYLGT-NISTGEEVAIKLECIKTRH--------------------------PQLHIESKIYKLMQ 60 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~-~~~~~~~~aiK~~~~~~~~--------------------------~~~~~E~~~l~~l~ 60 (227)
-|.+.+.||+|+||.||+|. +..+|+.||+|+.+..... ..+.+|.++++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 6778999999998653210 12457999999997
Q ss_pred C-CCCCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccc-eeccCCee-eEEEe
Q psy3118 61 G-GVGIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPG-IIDQEQKS-VMVVG 131 (227)
Q Consensus 61 ~-~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~-iiHrDlkp-ni~l~ 131 (227)
+ ...+++++... ..++||||+ |.+|...... ...++..++..++.|++ +|+.| |+|||||| |+++.
T Consensus 109 ~~~i~~p~~~~~~----~~~lV~E~~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAWR----RNVLVMEFIGGDGLPAPRLK-DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEec----CceEEEEEecCCcccccccc-cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 3 23355555432 248999999 7677665432 34566777788888888 99999 99999999 88886
Q ss_pred eccCCCeeeEEeeecccc
Q psy3118 132 TNISTGEEVAIKLECIKT 149 (227)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~ 149 (227)
+++.+++|||.+..
T Consensus 184 ----~~~i~LiDFg~a~~ 197 (237)
T smart00090 184 ----DGKVVIIDVSQSVE 197 (237)
T ss_pred ----CCCEEEEEChhhhc
Confidence 46789999998774
No 404
>KOG1025|consensus
Probab=99.81 E-value=7.5e-21 Score=162.01 Aligned_cols=194 Identities=19% Similarity=0.221 Sum_probs=149.5
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCc----EEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGE----EVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~----~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
..+..++||+|+||+||+|.+-..|+ +||||++..... ...+..|+-+|.++. |||++++.+++..+. +-|
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HHH
Confidence 45667899999999999999865564 789998755432 346888999999998 999999999988766 789
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|++|+ +|+|.|+++..+.++.....+.+..||+ +|+++.|||||.. |+++.+ ...+++.|||.++-..+.
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks---P~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS---PNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC---CCeEEEEecchhhccCcc
Confidence 99999 9999999999888999999999999999 9999999999999 888876 678999999998755442
Q ss_pred hhhHHHHHHhhccCCCCCeeeecccc-----CCeeEEEeeccCCCHHHHHhHcCCCCCHHHHHHH
Q psy3118 154 LHIESKIYKLMQGGVGIPQIKWCGSE-----GDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLL 213 (227)
Q Consensus 154 ~~~e~~~y~~l~g~~g~p~~~~~g~~-----~~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~l 213 (227)
..-|....|.. .++|..-+ .....-+.|++|...||+...-.++++...+-.|
T Consensus 852 ----~~ey~~~~gK~---pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI 909 (1177)
T KOG1025|consen 852 ----EKEYSAPGGKV---PIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI 909 (1177)
T ss_pred ----ccccccccccc---CcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh
Confidence 22233333322 23443221 1122345788999999999887677755444443
No 405
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.81 E-value=6.7e-19 Score=132.56 Aligned_cols=133 Identities=26% Similarity=0.357 Sum_probs=116.3
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCCC---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHH
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTRH---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLE 90 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 90 (227)
||+|++|.||++.+..+++.+++|........ +.+.+|+.+++.++ |++++++++++......++++|++ |++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 68999999999999878999999998765543 57889999999998 799999999999989999999999 79999
Q ss_pred HHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 91 DLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 91 ~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++......+++..+..++.+++ +|+.|++|+||+| |+++... .+..+++||+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~ 143 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLL 143 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEc
Confidence 99887334789999999999987 9999999999999 8888763 467899999977643
No 406
>KOG0665|consensus
Probab=99.81 E-value=2.9e-20 Score=143.32 Aligned_cols=197 Identities=18% Similarity=0.160 Sum_probs=148.5
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCc---
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD--- 76 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--- 76 (227)
.+..||.-+..+|.|.- .|..|.|..++++||+|....+ ...++..+|..++..+. |+||++++.++....
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccHH
Confidence 45678999999999987 7888999999999999976543 22357889999999998 999999999987654
Q ss_pred ---EEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 77 ---YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 77 ---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
..|+|||++..+|...+. ..++..++..+..|++ +|+.||+|||||| ||++.. ....++.|||.+
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~---~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS---DCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc---hhheeeccchhh
Confidence 489999999999988877 3588899999999988 9999999999999 888877 567899999998
Q ss_pred ccCCCc----hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc---CCCCCHHHHHHHHHHH
Q psy3118 148 KTRHPQ----LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC---SRRFSLKTVLLLADQL 217 (227)
Q Consensus 148 ~~~~~~----~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~---~~~f~~~~~l~l~~ql 217 (227)
....+. .-.+..+|..++-.. |.. ......||.+|+.+.||..++ +.+-.+.+...+..|+
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil--------~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVIL--------GMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQL 233 (369)
T ss_pred cccCcccccCchhheeeccCchhee--------ccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHh
Confidence 765543 222333444332211 111 222456799999999988764 3333444555555543
No 407
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=9.1e-19 Score=130.59 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=95.4
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCC------chhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHP------QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~------~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
..+...|++|+||+|+++.. .+.+++.+.+....... .+.+|+++|++|.+++++++++++ +..+++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 35678999999999998875 77788877665443311 367899999999878999999886 2359999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCC-ee-eEEEeeccCCCeeeEEeeeccccCCC
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQ-KS-VMVVGTNISTGEEVAIKLECIKTRHP 152 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDl-kp-ni~l~~~~~~~~~~~~~~~~~~~~~~ 152 (227)
||+ |.+|.+.... .. ......+...+. +|+.||+|||| || |++++. .+..+++|||.+....+
T Consensus 78 eyI~G~~L~~~~~~--~~--~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~---~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 78 SYLAGAAMYQRPPR--GD--LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE---DGSPAVIDFQLAVRGNP 144 (218)
T ss_pred eeecCccHHhhhhh--hh--HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC---CCCEEEEECCCceecCC
Confidence 999 8888654432 11 111222222222 99999999999 78 777764 57899999999875444
No 408
>KOG0664|consensus
Probab=99.79 E-value=7.2e-21 Score=144.32 Aligned_cols=179 Identities=15% Similarity=0.177 Sum_probs=133.3
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCc-----EEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD-----YNV 79 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-----~~~ 79 (227)
-+..+.||-|+||.||.+.|..+|+.||+|.+..-. ..+++.+|+.+|...+ |.|+....+.-+.+. ..|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHH
Confidence 345688999999999999999999999999764321 2357888999999998 999988776665443 368
Q ss_pred EEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 80 MVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 80 lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
+++|.+..+|..++-. ...++...+.-+..||+ +|+.||+|||||| |.++.+ +--.+++|||+++.-.+.
T Consensus 134 V~TELmQSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS---NCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 134 VLTELMQSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS---NCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHHhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc---CceEEecccccccccchh
Confidence 8889888888887776 57899999999999999 9999999999999 777766 456889999998754332
Q ss_pred ----h--hhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 154 ----L--HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 154 ----~--~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
+ ..-+..|+..+- ..|.......+++|..|....||..+
T Consensus 210 ~~~hMTqEVVTQYYRAPEi--------LMGaRhYs~AvDiWSVGCIFaELLgR 254 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPEL--------LMGARRYTGAVDIWSVGCIFAELLQR 254 (449)
T ss_pred hhhhhHHHHHHHHhccHHH--------hhcchhhcCccceehhhHHHHHHHhh
Confidence 1 112334443221 12334444566677777777776654
No 409
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2.4e-18 Score=130.93 Aligned_cols=129 Identities=22% Similarity=0.302 Sum_probs=100.1
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC----------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
+.||+|++|.||+|.+ .|..+++|....... ..++.+|++++..+. +++++....++...+..+++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5789999999999987 778899997643221 124677999999998 777776655555566778999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
||+ |++|.+++... .. +...++.+++ +|+.|++|+|++| |+++. .+...++|||.+....+.
T Consensus 79 e~~~G~~L~~~~~~~-~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~~~~~ 147 (211)
T PRK14879 79 EYIEGEPLKDLINSN-GM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEFSKDL 147 (211)
T ss_pred EEeCCcCHHHHHHhc-cH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccCCCcH
Confidence 999 99999998752 21 5556666665 9999999999999 88886 467889999988765443
No 410
>KOG0984|consensus
Probab=99.78 E-value=2.4e-19 Score=130.81 Aligned_cols=140 Identities=13% Similarity=0.107 Sum_probs=117.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
....+..||+|++|.|-+-++..+|...|+|.++..- ...++.+|+.+..+....|.+|++|+...+....|+.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 3455678999999999999999999999999986542 2346777888888877789999999999999999999999
Q ss_pred CCCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 85 LGPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 85 ~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+.-||..+.++. +..+++.-+-.|+..+. +|+ ..+||||+|| |++++. .|+++++|||.+...
T Consensus 127 M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~---~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 127 MDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY---DGQVKICDFGISGYL 199 (282)
T ss_pred hhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc---CCcEEEcccccceee
Confidence 999988776543 56788888888888877 775 4999999999 999887 799999999988754
No 411
>KOG1345|consensus
Probab=99.77 E-value=1.1e-19 Score=137.59 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=122.0
Q ss_pred ceecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEE-ccccCcEEEE
Q psy3118 3 LRVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKW-CGSEGDYNVM 80 (227)
Q Consensus 3 ~~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~-~~~~~~~~~l 80 (227)
+.+.+.|.+.+.||.|.||.+-+|.++.++..+++|.++++.. ...+.+|..---.|.+|.||+.-|+ .+++.+.+++
T Consensus 20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 20 VDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred cchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 3467789999999999999999999999999999999876643 3568889887778888999998764 5778889999
Q ss_pred EEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 81 VMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 81 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
++||+ .|+|.+-+.. ..+.+.....++.|++ +|++++||||||. ||++-+.. .-+++++|||.....
T Consensus 100 ~qE~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKV 173 (378)
T ss_pred eeccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeeccccccc
Confidence 99999 9999877665 5688888999999998 9999999999999 77765532 348999999977643
No 412
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=4.3e-18 Score=128.42 Aligned_cols=131 Identities=18% Similarity=0.222 Sum_probs=94.7
Q ss_pred eecccCcceEEEEEEcCCCcEEEEEEeeecCC----------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 14 KIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.||+|+||.||++.. ++..+++|....... ..++.+|++++..+. +++++....++...+..+++||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 489999999999985 678899998543221 134567999999998 5554443333344555689999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchh
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLH 155 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (227)
|+ |++|.+++... . . ..+..++..+. +|+.|++|+|++| |+++. .++.+++|||.+....+..+
T Consensus 78 ~~~g~~l~~~~~~~-~-~--~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~~~~~~ 144 (199)
T TIGR03724 78 YIEGKPLKDVIEEG-N-D--ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYSDEIED 144 (199)
T ss_pred EECCccHHHHHhhc-H-H--HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCCCcHHh
Confidence 99 99999987652 1 1 33344444444 9999999999999 88876 57799999998876554433
No 413
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.76 E-value=2.9e-18 Score=132.16 Aligned_cols=127 Identities=25% Similarity=0.297 Sum_probs=110.2
Q ss_pred CcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHHHHh
Q psy3118 19 SFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDLFN 94 (227)
Q Consensus 19 ~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~ 94 (227)
+||.||+|.+..+++.+|+|....... .+.+.+|++.+++++ |+|++++.+.+..+...++++|++ +++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999999988899999999865543 357888999999996 999999999999889999999999 779999988
Q ss_pred hCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 95 FCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 95 ~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.. ..++...+..++.+++ +|+.|++|+||+| |+++.. .+..++.||+.+...
T Consensus 80 ~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---~~~~~l~d~~~~~~~ 137 (244)
T smart00220 80 KR-GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---DGHVKLADFGLARQL 137 (244)
T ss_pred hc-cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---CCcEEEccccceeee
Confidence 73 3489999999999988 9999999999999 888876 478999999876643
No 414
>KOG1165|consensus
Probab=99.76 E-value=2e-18 Score=134.17 Aligned_cols=96 Identities=49% Similarity=0.833 Sum_probs=89.5
Q ss_pred EEeeccCCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCHH
Q psy3118 129 VVGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSLK 208 (227)
Q Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~~ 208 (227)
..+.+.-+++.++++|+..+...|++..|+..|+.|.|++|+|.++++|+++.++.+||++||++|+|||+.|+++|+++
T Consensus 45 f~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvK 124 (449)
T KOG1165|consen 45 FLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVK 124 (449)
T ss_pred ecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHH
Confidence 45566667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q psy3118 209 TVLLLADQLFLYNTRL 224 (227)
Q Consensus 209 ~~l~l~~ql~~~~~~~ 224 (227)
++++++.|||.-.+.+
T Consensus 125 TV~miA~Qmi~rie~v 140 (449)
T KOG1165|consen 125 TVAMIAKQMITRIEYV 140 (449)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 9999999999766544
No 415
>KOG0200|consensus
Probab=99.76 E-value=3e-18 Score=148.86 Aligned_cols=189 Identities=14% Similarity=0.211 Sum_probs=144.0
Q ss_pred EEEEeeecccCcceEEEEEEc---C----CCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccccCcEE
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNI---S----TGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN 78 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~---~----~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~ 78 (227)
.++.+.||.|.||+|++|.-. . ....||+|..+.... .+.+..|+++|+.+.+|+||+.+.+++..++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~ 377 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPL 377 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCce
Confidence 466779999999999999742 1 135799999865433 356888999999999999999999999999999
Q ss_pred EEEEeCC-CCCHHHHHhhCC---------------CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCC
Q psy3118 79 VMVMELL-GPSLEDLFNFCS---------------RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIST 136 (227)
Q Consensus 79 ~lv~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~ 136 (227)
++|+||+ .|+|.++++..+ ..++..+.+.++.||+ +++..+|||||.. |+++.. +
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~---~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK---N 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC---C
Confidence 9999999 999999999754 2489999999999999 8999999999999 999987 4
Q ss_pred CeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCee-----EEEeeccCCCHHHHHhHcCCCCC
Q psy3118 137 GEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYN-----VMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~-----~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
...++.|||+++....... |.. .++.+--++-|..++.-.. .-+.|.+|.-++|+|+.-+.++.
T Consensus 455 ~~~kIaDFGlar~~~~~~~-----y~~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDY-----YRT-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred CEEEEccccceeccCCCCc-----eEe-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 6789999999984433221 111 1112111233655542221 22468899999999987666664
No 416
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.74 E-value=1.3e-17 Score=143.32 Aligned_cols=135 Identities=19% Similarity=0.253 Sum_probs=99.6
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec-CC---------CCchhhHHHHHHHhcCCCCCCeeEEccccCcE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-TR---------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDY 77 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-~~---------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 77 (227)
.|...+.||+|+||.||++.+. +..+++|..... .. ..++.+|+++++.++ |++++....+...+..
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCCC
Confidence 3456789999999999999873 444555542211 11 134778999999998 8888887666666666
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
.++||||+ |++|.+++.. ...++.|++ +|+.|++|||+|| |+++ . .+..+++|||.++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~~---------~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~---~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLEG---------NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-R---DDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHHHHH---------HHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-E---CCcEEEEeCcccccC
Confidence 78999999 9999988762 233444444 9999999999999 9888 3 568899999998866
Q ss_pred CCchhhHH
Q psy3118 151 HPQLHIES 158 (227)
Q Consensus 151 ~~~~~~e~ 158 (227)
.+..+...
T Consensus 478 ~~~~d~a~ 485 (535)
T PRK09605 478 DLIEDKAV 485 (535)
T ss_pred CchHhhhh
Confidence 55444333
No 417
>KOG1163|consensus
Probab=99.74 E-value=7.5e-18 Score=125.80 Aligned_cols=93 Identities=66% Similarity=1.118 Sum_probs=87.9
Q ss_pred eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 127 VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 127 ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.|.++.+..+|+.++++.+.++.++|++..|+.+|..++|+.|+|.+.|+|.++.++.+||++|||+|++||+.|.+.|+
T Consensus 30 dIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ft 109 (341)
T KOG1163|consen 30 DIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFT 109 (341)
T ss_pred heeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHHHHHHhhhhh
Confidence 35566666689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy3118 207 LKTVLLLADQLFL 219 (227)
Q Consensus 207 ~~~~l~l~~ql~~ 219 (227)
.++++++++||+-
T Consensus 110 mkTvLMLaDQml~ 122 (341)
T KOG1163|consen 110 MKTVLMLADQMLS 122 (341)
T ss_pred HHhHHHHHHHHHH
Confidence 9999999999975
No 418
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.5e-17 Score=125.40 Aligned_cols=130 Identities=19% Similarity=0.237 Sum_probs=95.0
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC------------------------CCchhhHHHHHHHhcCCC-
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR------------------------HPQLHIESKIYKLMQGGV- 63 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~------------------------~~~~~~E~~~l~~l~~~~- 63 (227)
|.+.+.||+|+||.||++.+. +|+.+|||+.+.+.. .....+|..++..+. ++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 888999999999999999864 799999998754320 012567889999997 55
Q ss_pred -CCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCee
Q psy3118 64 -GIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 64 -~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
.++..++. ...+++|||+ |++|.++... .-....+..++.++. +|+.||+|||||| |++++. ++..
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~---~~~~ 164 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD---DEKI 164 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc---ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC---CCcE
Confidence 45555542 3348999999 8888765431 122333344444444 9999999999999 888875 6789
Q ss_pred eEEeeeccccC
Q psy3118 140 VAIKLECIKTR 150 (227)
Q Consensus 140 ~~~~~~~~~~~ 150 (227)
+++|||.+...
T Consensus 165 ~liDfg~~~~~ 175 (198)
T cd05144 165 YIIDWPQMVST 175 (198)
T ss_pred EEEECCccccC
Confidence 99999988643
No 419
>KOG1166|consensus
Probab=99.71 E-value=3.9e-17 Score=144.40 Aligned_cols=140 Identities=24% Similarity=0.303 Sum_probs=111.7
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhc--CCCCCCeeEEccccCcEEEEEEe
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
+..|.+.+.+|+|+||+||+|.+.. |+.||||+.+.....+ +..=.+++.+|+ --+.|..+..+..-.+..++|+|
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE 774 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence 5679999999999999999999766 9999999986654332 222334555554 12566667777777778899999
Q ss_pred CC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccC----CCeeeEEeeeccc
Q psy3118 84 LL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNIS----TGEEVAIKLECIK 148 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~----~~~~~~~~~~~~~ 148 (227)
|. .|+|.|+++. .+.+++.-+..++.|++ +|..+|||+|||| |++|..... ..-.+++|||.+-
T Consensus 775 y~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 775 YSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred ccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 99 9999999996 67899999999999999 9999999999999 888776432 3457899999664
No 420
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.70 E-value=3.1e-16 Score=121.29 Aligned_cols=132 Identities=13% Similarity=0.198 Sum_probs=98.3
Q ss_pred eeec-ccCcceEEEEEEcCCCcEEEEEEeeecC---------------CCCchhhHHHHHHHhcCCCCC--CeeEEcccc
Q psy3118 13 RKIG-SGSFGDIYLGTNISTGEEVAIKLECIKT---------------RHPQLHIESKIYKLMQGGVGI--PQIKWCGSE 74 (227)
Q Consensus 13 ~~lg-~G~fg~V~~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~E~~~l~~l~~~~~i--~~~~~~~~~ 74 (227)
..|| .||.|+||.+.. .+..++||...... ...++.+|++++..|. ++++ +..+.+...
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence 4577 788888998876 47789999774321 1235788999999998 6664 566555332
Q ss_pred -Cc---EEEEEEeCC-C-CCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 75 -GD---YNVMVMELL-G-PSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 75 -~~---~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
.. ..++|||++ | .+|.+++.. ..++......++..+. +|++||+|||||| |++++. +++.+++||+.
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~---~~~v~LIDfg~ 188 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE--APLSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDP---DGKFWLIDFDR 188 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcC---CCCEEEEECCC
Confidence 22 245999999 6 589988875 4677777767666666 9999999999999 888865 45799999998
Q ss_pred cccCCC
Q psy3118 147 IKTRHP 152 (227)
Q Consensus 147 ~~~~~~ 152 (227)
+....+
T Consensus 189 ~~~~~~ 194 (239)
T PRK01723 189 GELRTP 194 (239)
T ss_pred cccCCC
Confidence 876554
No 421
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.68 E-value=7.1e-16 Score=110.57 Aligned_cols=138 Identities=16% Similarity=0.255 Sum_probs=103.5
Q ss_pred EEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 11 LGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 11 ~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
+.+.||+|.++.||++.. .+..+++|..........+..|..+++.++++ ..+++++.+...++..+++|||+ |.+
T Consensus 2 ~~~~i~~g~~~~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGT--KDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEe--cCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 457899999999999997 34789999875543345688999999999854 68999998888888899999999 777
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHh----c-ccc---cceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQL----S-ITA---PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi----~-lh~---~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+..+ +......++.++ . +|. .+++|+|++| |+++.. .+...++||+.+....+..+.-..
T Consensus 80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l~Df~~~~~~~~~~d~~~~ 148 (155)
T cd05120 80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGIIDWEYAGYGPPAFDLAAA 148 (155)
T ss_pred cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEEEecccccCCChHHHHHHH
Confidence 6543 222222333333 3 676 5899999999 777765 578999999988876666555544
Q ss_pred HH
Q psy3118 160 IY 161 (227)
Q Consensus 160 ~y 161 (227)
++
T Consensus 149 ~~ 150 (155)
T cd05120 149 LL 150 (155)
T ss_pred HH
Confidence 43
No 422
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.67 E-value=7.4e-16 Score=115.02 Aligned_cols=127 Identities=22% Similarity=0.287 Sum_probs=87.2
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC----Cc----------------------hhhHHHHHHHhcCC-CC
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH----PQ----------------------LHIESKIYKLMQGG-VG 64 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----~~----------------------~~~E~~~l~~l~~~-~~ 64 (227)
.+.||+|+||+||+|.+. +++.||||+....... .. ...|.+.+..+.++ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999976 7899999987653211 11 13566777777632 23
Q ss_pred CCeeEEccccCcEEEEEEeCC-CCCHH-HHHhhCCCCcCHHHHHHHHHHhc-----ccc-cceeccCCee-eEEEeeccC
Q psy3118 65 IPQIKWCGSEGDYNVMVMELL-GPSLE-DLFNFCSRRFSLKTVLLLADQLS-----ITA-PGIIDQEQKS-VMVVGTNIS 135 (227)
Q Consensus 65 i~~~~~~~~~~~~~~lv~e~~-~~~L~-~~~~~~~~~~~~~~~~~i~~qi~-----lh~-~~iiHrDlkp-ni~l~~~~~ 135 (227)
+++.+.+. ..+++|||+ ++++. ..+.... .. .++..++.+++ +|. .||+|+|||| |++++
T Consensus 81 ~~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~---- 149 (187)
T cd05119 81 VPKPIDLN----RHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD---- 149 (187)
T ss_pred CCceEecC----CCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----
Confidence 55565542 248999999 63322 1122211 11 55666777766 898 9999999999 88887
Q ss_pred CCeeeEEeeeccccC
Q psy3118 136 TGEEVAIKLECIKTR 150 (227)
Q Consensus 136 ~~~~~~~~~~~~~~~ 150 (227)
++..+++|||.+...
T Consensus 150 ~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 DGKVYIIDVPQAVEI 164 (187)
T ss_pred CCcEEEEECcccccc
Confidence 567899999988643
No 423
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.61 E-value=1.4e-14 Score=115.84 Aligned_cols=135 Identities=27% Similarity=0.358 Sum_probs=114.4
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
|.+.+.||.|+||.||++.+. ..+|+|.+..... ...+.+|+.++..+.++++++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999986 7889998866533 23588899999999955589999999987777899999
Q ss_pred CC-CCCHHHHHhhCC--CCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccc
Q psy3118 84 LL-GPSLEDLFNFCS--RRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 84 ~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
++ ++++.+++.... ..++...+..+..|++ +|+.|++|||+|| |+++... ....++.|||.+.
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~--~~~~~l~dfg~~~ 150 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD--GRVVKLIDFGLAK 150 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCC--CCeEEEeccCcce
Confidence 99 999997777632 2799999999999998 8999999999999 8888774 2278999999876
No 424
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.55 E-value=3.7e-15 Score=126.44 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=93.9
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----------------------C------------------
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----------------------H------------------ 46 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----------------------~------------------ 46 (227)
.|+. +.||+|++|+||+|..+.+|+.||||+.+++-. .
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3555 789999999999999888899999999864310 0
Q ss_pred -CchhhHHHHHHHhc----CCC--CCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhC-CC----CcCHHHHHHHHHHhc
Q psy3118 47 -PQLHIESKIYKLMQ----GGV--GIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFC-SR----RFSLKTVLLLADQLS 113 (227)
Q Consensus 47 -~~~~~E~~~l~~l~----~~~--~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~----~~~~~~~~~i~~qi~ 113 (227)
-.+.+|...+.++. +.+ .|+.+++-+ ....++||||+ |+++.++-... .+ .+....+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~--st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDY--CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeeccc--CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 01344554444443 112 234444322 33468999999 99998753211 12 34455555555565
Q ss_pred ccccceeccCCee-eEEEeecc-CCCeeeEEeeeccccCCCc
Q psy3118 114 ITAPGIIDQEQKS-VMVVGTNI-STGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 114 lh~~~iiHrDlkp-ni~l~~~~-~~~~~~~~~~~~~~~~~~~ 153 (227)
...|++|+|+|| |+++..+. ..++.+++|||.....++.
T Consensus 277 -f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 -FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred -HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 478999999999 99987642 2358999999988766543
No 425
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.54 E-value=2.3e-14 Score=120.00 Aligned_cols=135 Identities=18% Similarity=0.275 Sum_probs=89.3
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----------------------C-------------------chh
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----------------------P-------------------QLH 50 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------~-------------------~~~ 50 (227)
+.||+|++|+||+|.. .+|+.||||+.+..-.. . .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5799999999999985 57999999997543100 0 134
Q ss_pred hHHHHHHHhc----CCCC--CCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHH-HHHHhc--cccccee
Q psy3118 51 IESKIYKLMQ----GGVG--IPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLL-LADQLS--ITAPGII 120 (227)
Q Consensus 51 ~E~~~l~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~-i~~qi~--lh~~~ii 120 (227)
+|...+.++. ++++ ++++++.+ ....++||||+ |.+|.++........+...+.. ++...+ +|..|++
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~ 279 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFF 279 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCce
Confidence 4555555543 2343 33444322 33468999999 9999887654222233332222 222222 7999999
Q ss_pred ccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 121 DQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 121 HrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|+|++| |+++.. +++.+++|||.+....+.
T Consensus 280 H~D~hPgNilv~~---~g~i~liDfG~~~~l~~~ 310 (437)
T TIGR01982 280 HADLHPGNIFVLK---DGKIIALDFGIVGRLSEE 310 (437)
T ss_pred eCCCCcccEEECC---CCcEEEEeCCCeeECCHH
Confidence 999999 888865 578999999988766543
No 426
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=1.6e-13 Score=99.35 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=101.7
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeec-CC---------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEE
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIK-TR---------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-~~---------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 82 (227)
..+++|+-+.++.+.. -|.++.+|.-.++ -. ..+..+|+.++.++. ..+|+...-+..+++...++|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 3578999999999966 4556777753222 11 235778999999997 556666555566667778999
Q ss_pred eCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 83 ELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 83 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
||+ |..|.|.+... .......+..++. +|..||||.||.+ |+++. .++.+++|||++.......+....
T Consensus 79 e~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~s~~~Ed~aVD 150 (204)
T COG3642 79 EYIEGELLKDALEEA----RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEFSDEVEDKAVD 150 (204)
T ss_pred EEeCChhHHHHHHhc----chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccccccHHhhhch
Confidence 999 88888888873 4667778888888 9999999999999 66665 345999999999865554444444
Q ss_pred HH
Q psy3118 160 IY 161 (227)
Q Consensus 160 ~y 161 (227)
+|
T Consensus 151 l~ 152 (204)
T COG3642 151 LH 152 (204)
T ss_pred HH
Confidence 33
No 427
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.51 E-value=4.3e-13 Score=98.40 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=94.8
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecC-CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCH
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSL 89 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L 89 (227)
.+.++.|.++.||++.. .+..+++|...... ......+|+.+++.+.+...+++++.+..+. .++|||++ |.++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~--~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPET--GVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCC--CeEEEEecCCCcc
Confidence 46789999999999986 47889999865443 2235678999999997544466777665432 47999999 7776
Q ss_pred HHHHhhCCCCcCHHHHHHHHHHhc-ccccce-----eccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 90 EDLFNFCSRRFSLKTVLLLADQLS-ITAPGI-----IDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~i-----iHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
.+. ..........++..+. +|+.++ +|+|++| |+++. .+..+++||+.+....+..+..
T Consensus 79 ~~~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~~~~~~Dla 144 (170)
T cd05151 79 LTE-----DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGMNDPLFDLA 144 (170)
T ss_pred ccc-----cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccCCChHHHHH
Confidence 543 1122334445555555 898875 9999999 77776 3568999999888766655543
No 428
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.40 E-value=4.5e-12 Score=94.43 Aligned_cols=127 Identities=16% Similarity=0.103 Sum_probs=87.3
Q ss_pred EeeecccCcceEEEEEEcC------CCcEEEEEEeeecC-----------CCC-----------------chhhHHHHHH
Q psy3118 12 GRKIGSGSFGDIYLGTNIS------TGEEVAIKLECIKT-----------RHP-----------------QLHIESKIYK 57 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~------~~~~~aiK~~~~~~-----------~~~-----------------~~~~E~~~l~ 57 (227)
...||.|.-+.||.|.... .+..+|||+-+... ... +..+|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998643 35799999753210 000 1347999999
Q ss_pred HhcCC-CCCCeeEEccccCcEEEEEEeCCCC-CHH-HHHhhCCCCcCHHHHHHHHHHhc-----c-cccceeccCCee-e
Q psy3118 58 LMQGG-VGIPQIKWCGSEGDYNVMVMELLGP-SLE-DLFNFCSRRFSLKTVLLLADQLS-----I-TAPGIIDQEQKS-V 127 (227)
Q Consensus 58 ~l~~~-~~i~~~~~~~~~~~~~~lv~e~~~~-~L~-~~~~~~~~~~~~~~~~~i~~qi~-----l-h~~~iiHrDlkp-n 127 (227)
++... -++|.++.+ ...++||||+++ .+. ..++. ..++..++..+..|++ + |+.|+||+|++| |
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 99743 577888765 334899999954 332 12332 3455555555555555 4 999999999999 9
Q ss_pred EEEeeccCCCeeeEEeeeccc
Q psy3118 128 MVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 128 i~l~~~~~~~~~~~~~~~~~~ 148 (227)
+++. .++.+++||+.+-
T Consensus 156 IL~~----~~~v~iIDF~qav 172 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSV 172 (197)
T ss_pred EEEE----CCcEEEEECCCce
Confidence 8885 4679999999664
No 429
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.38 E-value=1.5e-13 Score=123.50 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=57.8
Q ss_pred CCCCeeEEcc-------ccCcEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEE
Q psy3118 63 VGIPQIKWCG-------SEGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMV 129 (227)
Q Consensus 63 ~~i~~~~~~~-------~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~ 129 (227)
+||.++.+++ ...+.+++++|+++++|.+++......+++.+++.++.|++ +|++||||||||| |++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL 112 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV 112 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence 5666666655 23346788899888999999986556799999999999999 9999999999999 888
Q ss_pred Eee
Q psy3118 130 VGT 132 (227)
Q Consensus 130 l~~ 132 (227)
+..
T Consensus 113 l~~ 115 (793)
T PLN00181 113 MSS 115 (793)
T ss_pred Ecc
Confidence 854
No 430
>KOG3087|consensus
Probab=99.37 E-value=6.9e-12 Score=90.79 Aligned_cols=138 Identities=14% Similarity=0.162 Sum_probs=97.5
Q ss_pred EEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-C---------CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 11 LGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-R---------HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 11 ~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-~---------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
....+-+|+-+.|+++.+ .|+.+.||.-.... . ..+..+|+.++.++. .-+|....-++.+...-.+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 567888999999999987 88888998643221 1 235788999999987 4455544444445555578
Q ss_pred EEeCCCC--CHHHHHhhC-CC-CcC---HHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 81 VMELLGP--SLEDLFNFC-SR-RFS---LKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 81 v~e~~~~--~L~~~~~~~-~~-~~~---~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
.|||+.| ++.+++... .. ..+ .+.+..+..++. +|.++|||+||.. |+++.++...-...++|||++....
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhccc
Confidence 9999944 888888764 21 122 223344555555 9999999999999 9888887444456899999887543
No 431
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=5.1e-11 Score=85.88 Aligned_cols=131 Identities=23% Similarity=0.353 Sum_probs=102.9
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
.+.+.|++|++|.||++.+ .|.++|+|+-+.++....+..|+++|..+++----+++|.++.+ ++.|||+ |.+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~ 98 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRP 98 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcc
Confidence 4567899999999999998 67799999988888888999999999999976677888888775 5669999 889
Q ss_pred HHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCe-e-eEEEeeccCCCeeeEEeeeccc-cCCCc
Q psy3118 89 LEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQK-S-VMVVGTNISTGEEVAIKLECIK-TRHPQ 153 (227)
Q Consensus 89 L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlk-p-ni~l~~~~~~~~~~~~~~~~~~-~~~~~ 153 (227)
|.+.... .+...+..++-... +...||-|..+. | .+++.. +++.+++||+.++ ...|.
T Consensus 99 L~~~~~~----~~rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~---~~~~~iIDFd~At~k~~p~ 160 (201)
T COG2112 99 LGKLEIG----GDRKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVN---DRDVYIIDFDSATFKKKPR 160 (201)
T ss_pred hhhhhhc----ccHHHHHHHHHHHHHHHHhccchhhhcCCceeEEec---CCcEEEEEccchhhccCCc
Confidence 8877663 14444555544444 888999999998 6 666655 4589999999887 34443
No 432
>KOG1024|consensus
Probab=99.23 E-value=1.8e-12 Score=103.41 Aligned_cols=186 Identities=17% Similarity=0.198 Sum_probs=129.4
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCC-----cEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEcccc-Cc
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTG-----EEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSE-GD 76 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~-----~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~-~~ 76 (227)
..|+++...+-+|.||.||.|.+++.. +.|-+|.++.... ...+..|...+..+. |||+..+.+...+ ..
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIEDYA 361 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCc-CCCccceeEEEeeccC
Confidence 457888899999999999999876433 2345565533222 124566888888887 9999999877665 45
Q ss_pred EEEEEEeCC-CCCHHHHHhhC-------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEE
Q psy3118 77 YNVMVMELL-GPSLEDLFNFC-------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAI 142 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~-------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~ 142 (227)
.++..+.+. -|+|..++... .+.++..+...++.|++ +|+.||||.||.. |.++++ .-++++.
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd---~LqVklt 438 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD---QLQVKLT 438 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh---heeEEec
Confidence 688888999 89999999832 24677888888999988 9999999999999 999987 4678888
Q ss_pred eeeccccCCCchhhHHHHHHhhccCCCCCeeeecccc-----CCeeEEEeeccCCCHHHHHhHcC
Q psy3118 143 KLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSE-----GDYNVMVMELLGPSLEDLFNFCS 202 (227)
Q Consensus 143 ~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~-----~~~~~~vm~~lg~~l~~l~~~~~ 202 (227)
|-.+++..-|.+ |..+....+ -++-|...+ .....-+.|.+|..+|||..-.+
T Consensus 439 DsaLSRDLFP~D------YhcLGDnEn-RPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~ 496 (563)
T KOG1024|consen 439 DSALSRDLFPGD------YHCLGDNEN-RPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGK 496 (563)
T ss_pred cchhccccCccc------ccccCCCCC-CcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCC
Confidence 877776554432 222211111 123443322 22234567888888888876543
No 433
>KOG0603|consensus
Probab=99.21 E-value=2.9e-12 Score=107.48 Aligned_cols=177 Identities=15% Similarity=0.159 Sum_probs=124.8
Q ss_pred eecccCcceEEEEEE---cCCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 14 KIGSGSFGDIYLGTN---ISTGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~---~~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
.+|+|+||.|++++- ...|.-+|+|..++.. .......|..++...++||.++++...++.+...++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998763 3456779999876642 22355669999999998999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC-chhhHH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP-QLHIES 158 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~-~~~~e~ 158 (227)
|+.|...+.. ...+++.....+...++ +|+.||++||+|| |++++. .|..+..|||.++..-. +.....
T Consensus 81 gg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~---~Ghi~~tdfglske~v~~~~~cgt 156 (612)
T KOG0603|consen 81 GGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL---EGHIKLTDFGLSKEAVKEKIACGT 156 (612)
T ss_pred cchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc---cCccccCCchhhhHhHhhhhcccc
Confidence 8898887776 35566665555554444 8999999999999 888887 78999999998874321 111222
Q ss_pred HHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 159 KIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 159 ~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
..|+..+= .- +....-+.|.+|+..-++..++ -+|.
T Consensus 157 ~eymApEI-------~~----gh~~a~D~ws~gvl~felltg~-~pf~ 192 (612)
T KOG0603|consen 157 YEYRAPEI-------IN----GHLSAADWWSFGVLAFELLTGT-LPFG 192 (612)
T ss_pred hhhhhhHh-------hh----ccCCcccchhhhhhHHHHhhCC-CCCc
Confidence 23332111 10 2223344566777777777663 3443
No 434
>KOG0590|consensus
Probab=99.19 E-value=8.8e-12 Score=107.90 Aligned_cols=135 Identities=19% Similarity=0.125 Sum_probs=102.4
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeee---cCC--C---CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECI---KTR--H---PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~---~~~--~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
.....+|.|++|.|+.+......+.++.|..+. ... . ..+..|..+-..+. |+|++.......+.....-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhh
Confidence 467889999999888888776666666664331 111 0 12445666666777 89987776666655555555
Q ss_pred EeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 82 MELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
||||.++|..++.. ...++..++..+.+|++ +|+.|+.|||+|| |+++.. .|..+++|||.+..
T Consensus 400 mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~---~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 400 MEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE---NGILKIIDFGAASV 469 (601)
T ss_pred hhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec---CCceEEeecCccee
Confidence 99993399999887 45899999999999999 9999999999999 877776 67899999997763
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.17 E-value=2.7e-10 Score=89.48 Aligned_cols=138 Identities=22% Similarity=0.316 Sum_probs=83.8
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCC-----CchhhHHHHHHHhcC---------C-----------
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRH-----PQLHIESKIYKLMQG---------G----------- 62 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~~---------~----------- 62 (227)
....++.||.|+++.||.+.|..|++++|+|+.....+. +.+++|.-....+.+ |
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 467889999999999999999999999999987655422 123333322222211 1
Q ss_pred -CCCCeeEEccccCc-----EEEEEEeCCCCCHHHHHhhC---CCC---cCHHHHHHHHHHhc-----ccccceeccCCe
Q psy3118 63 -VGIPQIKWCGSEGD-----YNVMVMELLGPSLEDLFNFC---SRR---FSLKTVLLLADQLS-----ITAPGIIDQEQK 125 (227)
Q Consensus 63 -~~i~~~~~~~~~~~-----~~~lv~e~~~~~L~~~~~~~---~~~---~~~~~~~~i~~qi~-----lh~~~iiHrDlk 125 (227)
++-+.......... +.+++|+-+.++|.+++... ... +.......+..|++ +|+.|+||+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 11111122222111 24788888899999886632 111 22222344556665 999999999999
Q ss_pred e-eEEEeeccCCCeeeEEeeeccc
Q psy3118 126 S-VMVVGTNISTGEEVAIKLECIK 148 (227)
Q Consensus 126 p-ni~l~~~~~~~~~~~~~~~~~~ 148 (227)
| |++++. +|..++.||+...
T Consensus 173 ~~nfll~~---~G~v~Lg~F~~~~ 193 (288)
T PF14531_consen 173 PENFLLDQ---DGGVFLGDFSSLV 193 (288)
T ss_dssp GGGEEE-T---TS-EEE--GGGEE
T ss_pred eeeEEEcC---CCCEEEcChHHHe
Confidence 9 999887 7899999987543
No 436
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.17 E-value=5.1e-10 Score=85.47 Aligned_cols=143 Identities=17% Similarity=0.205 Sum_probs=94.2
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecC---CCCchhhHHHHHHHhcCC-CCCCeeEEccccCc---EEEEEEeCC
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKT---RHPQLHIESKIYKLMQGG-VGIPQIKWCGSEGD---YNVMVMELL 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~-~~i~~~~~~~~~~~---~~~lv~e~~ 85 (227)
+.|+.|..+.||++... +|..+++|...... ....+.+|.++++.+.++ ..+++++.+..... ..+++||++
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 56899999999999863 35789999875543 245688999999999842 35677877766542 568999999
Q ss_pred -CCCHHHHHhhCCCCcCHHHHHHHHHHhc---------------------------------------------------
Q psy3118 86 -GPSLEDLFNFCSRRFSLKTVLLLADQLS--------------------------------------------------- 113 (227)
Q Consensus 86 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~--------------------------------------------------- 113 (227)
|.++.+.+.. ..+++.....++.+++
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 7776553310 0111111111111111
Q ss_pred ----------ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 114 ----------ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 114 ----------lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
.-...++|+|+.| |++++.+ ..+...++||+.+....+..+....
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~g~~~~Dla~~ 216 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATLGDPLADLGWL 216 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccccCChHHHHHHH
Confidence 1246789999999 8887653 1245789999988877766655443
No 437
>KOG1240|consensus
Probab=99.17 E-value=3.1e-12 Score=113.23 Aligned_cols=189 Identities=14% Similarity=0.092 Sum_probs=130.0
Q ss_pred eEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-C--Cchh---hHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 8 KYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-H--PQLH---IESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 8 ~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~--~~~~---~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
++...+.||++.|=+|.+|.+. .| .|++|+.-+... . ..+. .|++ . .+..+||+..+.-.-..++..|+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~-~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-F-ALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-H-HhhcCCcccchHHHHHhhHHHHHH
Confidence 6888999999999999999873 34 499998754331 1 2222 2444 3 344599999998877888889999
Q ss_pred EeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc-CCCch
Q psy3118 82 MELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT-RHPQL 154 (227)
Q Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~-~~~~~ 154 (227)
-+|...+|.|.+.. +.-+...+-+-|+.|++ +|..||+|+|||. |+++.++ +=..+.||...+. .-|.+
T Consensus 100 RqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW---NW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW---NWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee---chhhhhcccccCCccCCCC
Confidence 99999999999997 45578888899999998 9999999999999 8888774 3356778876642 11221
Q ss_pred hh------------------HHHHHHhhccCCCCCeeeeccccC---CeeEEEeeccCCCHHHHHhHcCCCCCHHHHHH
Q psy3118 155 HI------------------ESKIYKLMQGGVGIPQIKWCGSEG---DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLL 212 (227)
Q Consensus 155 ~~------------------e~~~y~~l~g~~g~p~~~~~g~~~---~~~~~vm~~lg~~l~~l~~~~~~~f~~~~~l~ 212 (227)
+. .-.++..+. .. .+.++ -...|+|-.+|+.+.|||....+.|++.+.+.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~------~~--~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a 246 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALG------KT--SVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA 246 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhcccc------cc--ccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh
Confidence 11 111111110 00 01111 12356666779999999987667888765543
No 438
>KOG4158|consensus
Probab=99.16 E-value=4e-11 Score=96.13 Aligned_cols=87 Identities=18% Similarity=0.172 Sum_probs=70.8
Q ss_pred cCCCCCCeeEEccc---------------------------cCcEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHh
Q psy3118 60 QGGVGIPQIKWCGS---------------------------EGDYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQL 112 (227)
Q Consensus 60 ~~~~~i~~~~~~~~---------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi 112 (227)
..||||+++..+|. ++..+|+||.-...+|..++-. +..+......+..|+
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~--~~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT--RHRSYRTGRVILAQL 350 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc--CCCchHHHHHHHHHH
Confidence 35899999865552 2456999999999999999986 567888888899999
Q ss_pred c-----ccccceeccCCee-eEEEeecc-CCCeeeEEeeeccc
Q psy3118 113 S-----ITAPGIIDQEQKS-VMVVGTNI-STGEEVAIKLECIK 148 (227)
Q Consensus 113 ~-----lh~~~iiHrDlkp-ni~l~~~~-~~~~~~~~~~~~~~ 148 (227)
+ +|+.||.|||+|. ||++--+. .....++.|||+.-
T Consensus 351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 8 9999999999999 88876542 24678899999764
No 439
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.11 E-value=5e-10 Score=83.13 Aligned_cols=117 Identities=21% Similarity=0.249 Sum_probs=71.5
Q ss_pred eEEEEEEcCCCcEEEEEEeeecC-------------CC---------------CchhhHHHHHHHhcCC-CCCCeeEEcc
Q psy3118 22 DIYLGTNISTGEEVAIKLECIKT-------------RH---------------PQLHIESKIYKLMQGG-VGIPQIKWCG 72 (227)
Q Consensus 22 ~V~~~~~~~~~~~~aiK~~~~~~-------------~~---------------~~~~~E~~~l~~l~~~-~~i~~~~~~~ 72 (227)
.||.|.. ..|.++|+|+-+... .. .+..+|.+.|+++... -++|+++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888885 567899999853310 00 1357799999999843 3678887664
Q ss_pred ccCcEEEEEEeCCC--CCHHHHHhhCCCCcCHHHHHHHHHH----hc--ccccceeccCCee-eEEEeeccCCCeeeEEe
Q psy3118 73 SEGDYNVMVMELLG--PSLEDLFNFCSRRFSLKTVLLLADQ----LS--ITAPGIIDQEQKS-VMVVGTNISTGEEVAIK 143 (227)
Q Consensus 73 ~~~~~~~lv~e~~~--~~L~~~~~~~~~~~~~~~~~~i~~q----i~--lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~ 143 (227)
. ..+||||++ |.....+... .++..+...+..+ +. +|+.||||+|+.+ |+++.. ++++++|
T Consensus 80 ~----~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~----~~~~iID 149 (188)
T PF01163_consen 80 R----NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD----GKVYIID 149 (188)
T ss_dssp T----TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET----TCEEE--
T ss_pred C----CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec----ceEEEEe
Confidence 3 379999996 6544445542 2222333333333 33 7899999999999 888874 4899999
Q ss_pred eecccc
Q psy3118 144 LECIKT 149 (227)
Q Consensus 144 ~~~~~~ 149 (227)
|+.+..
T Consensus 150 f~qav~ 155 (188)
T PF01163_consen 150 FGQAVD 155 (188)
T ss_dssp GTTEEE
T ss_pred cCccee
Confidence 997653
No 440
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.09 E-value=2.1e-09 Score=84.38 Aligned_cols=125 Identities=15% Similarity=0.079 Sum_probs=83.8
Q ss_pred eEEEEEEcCCCcEEEEEEeeecCC-----------CC--chhhHHHHHHHhcCCCCCCe--eEEcccc-----CcEEEEE
Q psy3118 22 DIYLGTNISTGEEVAIKLECIKTR-----------HP--QLHIESKIYKLMQGGVGIPQ--IKWCGSE-----GDYNVMV 81 (227)
Q Consensus 22 ~V~~~~~~~~~~~~aiK~~~~~~~-----------~~--~~~~E~~~l~~l~~~~~i~~--~~~~~~~-----~~~~~lv 81 (227)
.|.+... .|+.+.||.-..... .+ .+.+|...+.+|. ..+|+. +..+++. ....++|
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEEE
Confidence 3555543 667888996432210 11 3778999999986 344443 3444432 2357899
Q ss_pred EeCC-CC-CHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec----cCCCeeeEEeeeccc
Q psy3118 82 MELL-GP-SLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN----ISTGEEVAIKLECIK 148 (227)
Q Consensus 82 ~e~~-~~-~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~----~~~~~~~~~~~~~~~ 148 (227)
||++ +. +|.+++... ....+......++.++. +|+.||+|+|++| |+++..+ ....+..++||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 9999 54 799998642 23445555556666655 9999999999999 8888752 234678999999875
Q ss_pred c
Q psy3118 149 T 149 (227)
Q Consensus 149 ~ 149 (227)
.
T Consensus 194 ~ 194 (268)
T PRK15123 194 I 194 (268)
T ss_pred c
Confidence 4
No 441
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.94 E-value=6.1e-09 Score=80.22 Aligned_cols=129 Identities=21% Similarity=0.229 Sum_probs=89.8
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----------C------C-C-------CchhhHHHHHHHhcCC-C
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----------T------R-H-------PQLHIESKIYKLMQGG-V 63 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----------~------~-~-------~~~~~E~~~l~~l~~~-~ 63 (227)
..++..||-|.-|.||.|.+. .|.++|||.=+.. . . . ....+|.++|++|... -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 457789999999999999964 7899999963221 0 0 0 1257899999999843 4
Q ss_pred CCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc--ccccceeccCCee-eEEEeeccCCCee
Q psy3118 64 GIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS--ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 64 ~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~--lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
.+|..+++. .-.+|||++ |..|...-- ..-+.++++..+.+.. .-..||||+|+.+ |+++.. +|..
T Consensus 172 ~VP~P~~~n----RHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~---dg~~ 241 (304)
T COG0478 172 KVPKPIAWN----RHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE---DGDI 241 (304)
T ss_pred CCCCccccc----cceeeeehcccceeecccC---cccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec---CCCE
Confidence 677776543 238999999 656543321 1233444443333333 4589999999999 999987 6889
Q ss_pred eEEeeeccc
Q psy3118 140 VAIKLECIK 148 (227)
Q Consensus 140 ~~~~~~~~~ 148 (227)
+++||.-+.
T Consensus 242 ~vIDwPQ~v 250 (304)
T COG0478 242 VVIDWPQAV 250 (304)
T ss_pred EEEeCcccc
Confidence 999997443
No 442
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.87 E-value=7.8e-09 Score=87.74 Aligned_cols=135 Identities=19% Similarity=0.281 Sum_probs=91.1
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC----------------------C---C-----------------chh
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----------------------H---P-----------------QLH 50 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----------------------~---~-----------------~~~ 50 (227)
+.|+.++-|+||+|.. .+|+.||||+.+++-. . - .+.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 5788999999999995 4599999998654310 0 0 134
Q ss_pred hHHHHHHHhc----CCCC--CCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc---cccccee
Q psy3118 51 IESKIYKLMQ----GGVG--IPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS---ITAPGII 120 (227)
Q Consensus 51 ~E~~~l~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~---lh~~~ii 120 (227)
+|..-+.+++ +.++ ||++++-+ .+...++|||+ |-.+.|........++...+.....+.+ +-..|+.
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~--t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgff 287 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEY--TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhc--cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCcc
Confidence 4555555443 2344 44444332 33458999999 8888888433234455555544444444 3348999
Q ss_pred ccCCee-eEEEeeccCCCeeeEEeeeccccCCCc
Q psy3118 121 DQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQ 153 (227)
Q Consensus 121 HrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~ 153 (227)
|.|..| |+++.. .|+...+|||......+.
T Consensus 288 HaDpHpGNi~v~~---~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 288 HADPHPGNILVRS---DGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred ccCCCccceEEec---CCcEEEEcCcceecCCHH
Confidence 999999 988887 589999999988766654
No 443
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.75 E-value=8.7e-08 Score=72.63 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=74.2
Q ss_pred CCchhhHHHHHHHhcCCCC--CCeeEEccccC----cEEEEEEeCC-C-CCHHHHHhhCCCCcCHHHHHHHHHHhc----
Q psy3118 46 HPQLHIESKIYKLMQGGVG--IPQIKWCGSEG----DYNVMVMELL-G-PSLEDLFNFCSRRFSLKTVLLLADQLS---- 113 (227)
Q Consensus 46 ~~~~~~E~~~l~~l~~~~~--i~~~~~~~~~~----~~~~lv~e~~-~-~~L~~~~~~~~~~~~~~~~~~i~~qi~---- 113 (227)
..+..+|...+..|. ..+ ++..+.+.... ...++|+|++ + .+|.+++... ...+......++.++.
T Consensus 55 ~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~-~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW-EQLDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh-cccchhhHHHHHHHHHHHHH
Confidence 346788999988887 344 44455555442 2468999999 5 3799998862 2244555555555554
Q ss_pred -ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCC
Q psy3118 114 -ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRH 151 (227)
Q Consensus 114 -lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~ 151 (227)
+|+.||+|+|++| |+++..+....+..++||+.++...
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 9999999999999 8888876544578999999877544
No 444
>KOG0590|consensus
Probab=98.72 E-value=1.7e-09 Score=93.84 Aligned_cols=142 Identities=19% Similarity=0.203 Sum_probs=111.8
Q ss_pred cCeEEEEeeecccCcceEEEEEEc-CCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEE
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNI-STGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~l 80 (227)
...|.+.+.||+|+|+.|-.+... .+...+|.|.+..... ..+...|..+-+.+.+|+|++.+++...+++..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 456889999999999999888763 3445677776654431 12455588888888889999999999999999999
Q ss_pred EEeCC-CCCHHHHH-hhCCCCcCHHHHHHHHHHhc-----cc-ccceeccCCee-eEEEeeccCCC-eeeEEeeeccccC
Q psy3118 81 VMELL-GPSLEDLF-NFCSRRFSLKTVLLLADQLS-----IT-APGIIDQEQKS-VMVVGTNISTG-EEVAIKLECIKTR 150 (227)
Q Consensus 81 v~e~~-~~~L~~~~-~~~~~~~~~~~~~~i~~qi~-----lh-~~~iiHrDlkp-ni~l~~~~~~~-~~~~~~~~~~~~~ 150 (227)
++++. |+++.+.+ .......+...+-.+..|+. +| ..++.|||+|| |.++.. ++ ..+..||+.++..
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~---s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE---SGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---CCCcccCCCchhhccc
Confidence 99999 99999888 43222677788888888887 89 99999999999 666665 44 7788899877643
No 445
>KOG1235|consensus
Probab=98.71 E-value=9.9e-08 Score=81.01 Aligned_cols=138 Identities=20% Similarity=0.236 Sum_probs=94.2
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCC---------------------------------CCc------hhhHH
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---------------------------------HPQ------LHIES 53 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---------------------------------~~~------~~~E~ 53 (227)
+.||.-+.|+|++|+.+ +|+.||||+.++.-+ .+. +.+|.
T Consensus 167 ~piaaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 57899999999999965 499999998544210 011 22333
Q ss_pred HH----HHHhcCCCC------CCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc---ccccce
Q psy3118 54 KI----YKLMQGGVG------IPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS---ITAPGI 119 (227)
Q Consensus 54 ~~----l~~l~~~~~------i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~---lh~~~i 119 (227)
+- .+.+. +-+ ||++++.+... ..|+|||+ |..+.|+-.-....++...+..-+.+.. +-..|+
T Consensus 246 ~Nae~~~~~f~-~~~~~~~V~VP~Vy~~~st~--RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~Gf 322 (538)
T KOG1235|consen 246 KNAERFRENFK-DFSLLTYVLVPKVYWDLSTK--RVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGF 322 (538)
T ss_pred HhHHHHHHHHH-hcccccceeCCeehhhcCcc--eEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 22 22222 333 77777665543 57999999 8877766443346678777776666655 556789
Q ss_pred eccCCee-eEEEeecc-CCCeeeEEeeeccccCCCch
Q psy3118 120 IDQEQKS-VMVVGTNI-STGEEVAIKLECIKTRHPQL 154 (227)
Q Consensus 120 iHrDlkp-ni~l~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (227)
+|+|-.| |+++..+. ...+.++.|+|.........
T Consensus 323 fHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~ 359 (538)
T KOG1235|consen 323 FHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT 359 (538)
T ss_pred ccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence 9999999 99998653 35789999999887665543
No 446
>PRK09902 hypothetical protein; Provisional
Probab=98.68 E-value=4.7e-07 Score=68.01 Aligned_cols=132 Identities=15% Similarity=0.132 Sum_probs=87.8
Q ss_pred cccCcceEEEEEEcCCCcEEEEEEeee--------cCCCCchhhHHHHHHHhcC-CCCCCeeEEcccc----CcEEEEEE
Q psy3118 16 GSGSFGDIYLGTNISTGEEVAIKLECI--------KTRHPQLHIESKIYKLMQG-GVGIPQIKWCGSE----GDYNVMVM 82 (227)
Q Consensus 16 g~G~fg~V~~~~~~~~~~~~aiK~~~~--------~~~~~~~~~E~~~l~~l~~-~~~i~~~~~~~~~----~~~~~lv~ 82 (227)
|+||-+.|+.... .|+.+=+|.-.. +...+.+.+|...++.|.. .-.++++..+... ....+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 6688899998765 455688886431 1123468999999999872 1225555422221 22478999
Q ss_pred eCCC--CCHHHHHhhC-CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccC
Q psy3118 83 ELLG--PSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 83 e~~~--~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
|-++ .+|.+++... ..+.+...-..+..++. +|+.|+.|+|+-| ||++..+. .-++..+||+.++.+
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccchh
Confidence 9885 6999888652 12344554344444444 9999999999999 99997532 235889999977644
No 447
>KOG0606|consensus
Probab=98.67 E-value=1.5e-08 Score=90.24 Aligned_cols=181 Identities=19% Similarity=0.237 Sum_probs=104.3
Q ss_pred cCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 6 GNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 6 ~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.++|..++.+-.|+||.||.++|+.+.+.+|+|+- + +.--+++ ++.... .|.++
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiN-k--q~lilRn---ilt~a~-npfvv------------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKIN-K--QNLILRN---ILTFAG-NPFVV------------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccc-c--cchhhhc---cccccC-Cccee-------------------
Confidence 56799999999999999999999999999999652 2 1111111 111121 22222
Q ss_pred CCCHHHHHhhCCCCcCHHHHHHHHHHhcccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCC-------chhhH
Q psy3118 86 GPSLEDLFNFCSRRFSLKTVLLLADQLSITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHP-------QLHIE 157 (227)
Q Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~e 157 (227)
|+-..+++.. +.++..-+ ++.+- +|+.||+|||+|| |.++.. -|+.++.|||+++...- ....+
T Consensus 136 -gDc~tllk~~-g~lPvdmv--la~Ey-lh~ygivhrdlkpdnllIT~---mGhiKlTDfgLsk~GLms~atnl~eg~I~ 207 (1205)
T KOG0606|consen 136 -GDCATLLKNI-GPLPVDMV--LAVEY-LHSYGIVHRDLKPDNLLITS---MGHIKLTDFGLSKKGLMSLATNLKEGHIE 207 (1205)
T ss_pred -chhhhhcccC-CCCcchhh--HHhHh-hccCCeecCCCCCCcceeee---cccccccchhhhhhhhhhccchhhhcchH
Confidence 5556666653 33443331 11111 8999999999999 666655 68999999998763211 11222
Q ss_pred HHHH----HhhccCCCC--C---eeeeccccCCee--------EEEe--eccCCCHHHHHhHc---------CCCCCHHH
Q psy3118 158 SKIY----KLMQGGVGI--P---QIKWCGSEGDYN--------VMVM--ELLGPSLEDLFNFC---------SRRFSLKT 209 (227)
Q Consensus 158 ~~~y----~~l~g~~g~--p---~~~~~g~~~~~~--------~~vm--~~lg~~l~~l~~~~---------~~~f~~~~ 209 (227)
...- +.+.|++.. | -...+|+.-+|. |+|+ .++|.++++||... +..-...+
T Consensus 208 k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~E 287 (1205)
T KOG0606|consen 208 KDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPE 287 (1205)
T ss_pred HHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHH
Confidence 2111 122344321 1 122244444433 4554 55688888887542 11223446
Q ss_pred HHHHHHHHHHH
Q psy3118 210 VLLLADQLFLY 220 (227)
Q Consensus 210 ~l~l~~ql~~~ 220 (227)
+-.++.||+.-
T Consensus 288 a~dli~~LL~q 298 (1205)
T KOG0606|consen 288 AQDLIEQLLRQ 298 (1205)
T ss_pred HHHHHHHHHHh
Confidence 66777777643
No 448
>KOG0601|consensus
Probab=98.67 E-value=2.3e-08 Score=84.04 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=109.4
Q ss_pred ecCeEEEEeeecc--cCcceEEEEEE--cCCCcEEEEEEeeec----CCCCchhhHHHHHHHhcCCCCCCeeEEccccCc
Q psy3118 5 VGNKYRLGRKIGS--GSFGDIYLGTN--ISTGEEVAIKLECIK----TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGD 76 (227)
Q Consensus 5 ~~~~y~~~~~lg~--G~fg~V~~~~~--~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 76 (227)
+...+.+...+|. |.+|.||.+.. ..++..+|+|.-... ....+=.+|+.-.+++..|++.++.+..+...+
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence 3456778889999 99999999998 888899999974322 222344668888888988999999999999999
Q ss_pred EEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc---------ccccceeccCCee-eEEEeeccCCCeeeEEeee
Q psy3118 77 YNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS---------ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLE 145 (227)
Q Consensus 77 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~---------lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~ 145 (227)
..|+-+|+|+.+|.++......-++...+.....+.. +|..+++|-|+|| |+++..+. ...+..||+
T Consensus 192 ~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~--~s~~~~df~ 268 (524)
T KOG0601|consen 192 ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW--TSCKLTDFG 268 (524)
T ss_pred cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc--ceeecCCcc
Confidence 9999999999999988876544466777766666554 8999999999999 88887752 344555554
No 449
>KOG0601|consensus
Probab=98.54 E-value=6.5e-08 Score=81.37 Aligned_cols=126 Identities=14% Similarity=0.045 Sum_probs=100.5
Q ss_pred CeEEEEeeecccCcceEEEEEEc-CCCcEEEEEEeeecC----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNI-STGEEVAIKLECIKT----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~-~~~~~~aiK~~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
.+|..+..||.|.|+.|+.+..+ .++..|++|...... ....-..|+.+...+..|.+++..+..+...+..|+-
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip 344 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP 344 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence 46889999999999999998755 677899999765432 1223455888888888899999988888877777899
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeec
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~ 133 (227)
.||| ++++...... ...+.+...+.+..|++ +|++.++|+|+|| |+.+..+
T Consensus 345 ~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~ 402 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND 402 (524)
T ss_pred hhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc
Confidence 9999 8887665533 45678888888888888 8999999999999 8777763
No 450
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.51 E-value=1.3e-06 Score=67.11 Aligned_cols=138 Identities=13% Similarity=0.108 Sum_probs=88.0
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CCCCeeEEccccCcEEEEEEeCC-CCC-H
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VGIPQIKWCGSEGDYNVMVMELL-GPS-L 89 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~~~~~~~~~lv~e~~-~~~-L 89 (227)
..||+|..+.||+. .+..+++|............+|.++++.+.+. -.+++.+.+...++...++||++ |.+ +
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 56899999999984 25568889876544445678899999999743 33678888888877788999999 643 1
Q ss_pred HHHH--------------hh----C-C---CCcCHH------------------HHHHHHHHhc---ccccceeccCCee
Q psy3118 90 EDLF--------------NF----C-S---RRFSLK------------------TVLLLADQLS---ITAPGIIDQEQKS 126 (227)
Q Consensus 90 ~~~~--------------~~----~-~---~~~~~~------------------~~~~i~~qi~---lh~~~iiHrDlkp 126 (227)
...+ .. . . ...+.. .....+...+ --...++|+|+.|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~ 162 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI 162 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence 1111 10 0 0 001100 1111111111 1134568999999
Q ss_pred -eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 127 -VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 127 -ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
|+++.. .+ ..++||+.+....|..+.-.
T Consensus 163 ~Nii~~~---~~-~~iIDwe~a~~Gdp~~Dla~ 191 (226)
T TIGR02172 163 GNLITSG---KG-TYWIDLGDFGYGNPLFDLGL 191 (226)
T ss_pred CcEEEcC---CC-cEEEechhcCcCCHHHHHHH
Confidence 888865 34 88999998887766555443
No 451
>KOG1164|consensus
Probab=98.51 E-value=1.9e-06 Score=69.89 Aligned_cols=88 Identities=41% Similarity=0.464 Sum_probs=74.0
Q ss_pred eeeEEeeecccc--CCCchhhHHHHHHhhc---cCCCCCeeeecc-ccCCeeEEEeeccCCCHHHHHhHcC-CCCCHHHH
Q psy3118 138 EEVAIKLECIKT--RHPQLHIESKIYKLMQ---GGVGIPQIKWCG-SEGDYNVMVMELLGPSLEDLFNFCS-RRFSLKTV 210 (227)
Q Consensus 138 ~~~~~~~~~~~~--~~~~~~~e~~~y~~l~---g~~g~p~~~~~g-~~~~~~~~vm~~lg~~l~~l~~~~~-~~f~~~~~ 210 (227)
..++++++.... ....+..|..++..+. +..++|.+.+.| ..+.++++||.++|++|++++..++ ++|+..++
T Consensus 45 ~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~ 124 (322)
T KOG1164|consen 45 KEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTV 124 (322)
T ss_pred eeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHH
Confidence 567888776542 2337888999999988 567999999999 5899999999999999999997765 99999999
Q ss_pred HHHHHHHHHHhhhcc
Q psy3118 211 LLLADQLFLYNTRLC 225 (227)
Q Consensus 211 l~l~~ql~~~~~~~~ 225 (227)
+.++.|++...+-|+
T Consensus 125 l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 125 LRIAIQNLNALEDLH 139 (322)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998776543
No 452
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.46 E-value=3e-06 Score=64.86 Aligned_cols=126 Identities=21% Similarity=0.261 Sum_probs=82.3
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----------C---------------CchhhHHHHHHHhcC-CCC
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----------H---------------PQLHIESKIYKLMQG-GVG 64 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----------~---------------~~~~~E~~~l~~l~~-~~~ 64 (227)
...|.+|.-+.||+|.. .++..+|+|+...... . .+...|..-|+++.. +-.
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34667788889999984 5688999998643210 0 124558888888762 244
Q ss_pred CCeeEEccccCcEEEEEEeCCCCC--HHHHHhhCCCCcCHHHHHHHHHHhc------ccccceeccCCee-eEEEeeccC
Q psy3118 65 IPQIKWCGSEGDYNVMVMELLGPS--LEDLFNFCSRRFSLKTVLLLADQLS------ITAPGIIDQEQKS-VMVVGTNIS 135 (227)
Q Consensus 65 i~~~~~~~~~~~~~~lv~e~~~~~--L~~~~~~~~~~~~~~~~~~i~~qi~------lh~~~iiHrDlkp-ni~l~~~~~ 135 (227)
+|+.+.+.. ..|||||+|.. -.-.|+. -.+...++..+..+++ .+..|+||.||.. |+++.
T Consensus 132 vP~Pi~~~~----nVLvMEfIg~~g~pAP~LkD--v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~---- 201 (268)
T COG1718 132 VPEPIAFRN----NVLVMEFIGDDGLPAPRLKD--VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH---- 201 (268)
T ss_pred CCCceeecC----CeEEEEeccCCCCCCCCccc--CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE----
Confidence 555555443 37999999544 1122222 2233334444444444 6679999999999 99997
Q ss_pred CCeeeEEeeeccc
Q psy3118 136 TGEEVAIKLECIK 148 (227)
Q Consensus 136 ~~~~~~~~~~~~~ 148 (227)
.+.++++|++-+-
T Consensus 202 ~~~p~iID~~QaV 214 (268)
T COG1718 202 DGEPYIIDVSQAV 214 (268)
T ss_pred CCeEEEEECcccc
Confidence 5789999998665
No 453
>KOG1243|consensus
Probab=98.41 E-value=6.3e-07 Score=76.71 Aligned_cols=163 Identities=18% Similarity=0.074 Sum_probs=109.1
Q ss_pred EE-EEEEcCCCcEEEEEEeeecCC--CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCCCCCHHHHHhhCCCC
Q psy3118 23 IY-LGTNISTGEEVAIKLECIKTR--HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRR 99 (227)
Q Consensus 23 V~-~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~ 99 (227)
+| .|..+.++.+|.+...+.... .....+-++-|+.++ ||+|.++++.++..+..|+|+|.+. -|..+++.
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvTErV~-Pl~~~lk~---- 100 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVTERVR-PLETVLKE---- 100 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEeeccc-cHHHHHHH----
Confidence 44 466678899999988765544 234566778899998 9999999999999999999999882 23455665
Q ss_pred cCHHHHHHHHHHhc-----cc-ccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCe
Q psy3118 100 FSLKTVLLLADQLS-----IT-APGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQ 172 (227)
Q Consensus 100 ~~~~~~~~i~~qi~-----lh-~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~ 172 (227)
++...+..-+.||+ || +.+++|.+|.- .+++.. .|+.++.+|+.......... ....+-.+.+.. .|.
T Consensus 101 l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~---~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~-~P~ 175 (690)
T KOG1243|consen 101 LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNE---SGEWKLGGLELVSKASGFNA-PAKSLYLIESFD-DPE 175 (690)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcC---CCcEEEeeeEEEeccccCCc-ccccchhhhccc-Chh
Confidence 33566666667776 64 88999999998 788877 79999999987643222111 111111111100 011
Q ss_pred eeeccccCCeeEEEeeccCCCHHHHHhH
Q psy3118 173 IKWCGSEGDYNVMVMELLGPSLEDLFNF 200 (227)
Q Consensus 173 ~~~~g~~~~~~~~vm~~lg~~l~~l~~~ 200 (227)
.. ++.+ .++.++.||.-.+++|++
T Consensus 176 ~~--~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EI--DPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hc--Cccc--cchhhhhHHHHHHHHhCc
Confidence 10 1111 346778888888898887
No 454
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.40 E-value=8.1e-06 Score=61.25 Aligned_cols=126 Identities=21% Similarity=0.192 Sum_probs=93.3
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecC------------------CCCchhhHHHHHHHhc-----CCCCCCee
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT------------------RHPQLHIESKIYKLMQ-----GGVGIPQI 68 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~------------------~~~~~~~E~~~l~~l~-----~~~~i~~~ 68 (227)
...||+|+.=.||.-- .....+||+..... ......+|+.-...+. .+..|+++
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3578999988888633 34457888876544 1234666776666654 25789999
Q ss_pred EEccccCcEEEEEEeCC-C------CCHHHHHhhCCCCcCHHHHHHHHHHhc--ccccceeccCCee-eEEEeeccCCC-
Q psy3118 69 KWCGSEGDYNVMVMELL-G------PSLEDLFNFCSRRFSLKTVLLLADQLS--ITAPGIIDQEQKS-VMVVGTNISTG- 137 (227)
Q Consensus 69 ~~~~~~~~~~~lv~e~~-~------~~L~~~~~~~~~~~~~~~~~~i~~qi~--lh~~~iiHrDlkp-ni~l~~~~~~~- 137 (227)
+++.+++.-.-+|+|.+ . .+|.+++.. ..++. .+...+.++. +-+.+|+.+|++| ||++.......
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~--~~~~~-~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~ 159 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKE--GGLTE-ELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEF 159 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHc--CCccH-HHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCce
Confidence 99999998889999976 3 378888865 55777 6666666666 8899999999999 88888765554
Q ss_pred eeeEEe
Q psy3118 138 EEVAIK 143 (227)
Q Consensus 138 ~~~~~~ 143 (227)
+.+++|
T Consensus 160 ~lvlID 165 (199)
T PF10707_consen 160 RLVLID 165 (199)
T ss_pred EEEEEe
Confidence 678888
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.38 E-value=2.8e-06 Score=64.16 Aligned_cols=134 Identities=11% Similarity=0.106 Sum_probs=82.7
Q ss_pred eecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC-----------CCchhhHHHHHHHhcC--CCCCCeeEE
Q psy3118 4 RVGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR-----------HPQLHIESKIYKLMQG--GVGIPQIKW 70 (227)
Q Consensus 4 ~~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----------~~~~~~E~~~l~~l~~--~~~i~~~~~ 70 (227)
.+.++|+..+.+-......|.+-. .+|..+.+|.-+.... .+...+++..+.++.+ -.....++-
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 457788888888887766666554 3778999997543221 1223445555555541 122222222
Q ss_pred ccc-----cCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccceeccCCee-eEEEeeccCCCeeeEE
Q psy3118 71 CGS-----EGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGIIDQEQKS-VMVVGTNISTGEEVAI 142 (227)
Q Consensus 71 ~~~-----~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~ 142 (227)
+.. -....+++|||+ |..|.+... +++..+-.+...+- +|+.|+.|+|..| |+++. .+...++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~~~i~iI 176 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----NNGIRII 176 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh-----cCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----CCcEEEE
Confidence 222 234567999999 888776543 23322222332222 8999999999999 87776 3558999
Q ss_pred eeeccc
Q psy3118 143 KLECIK 148 (227)
Q Consensus 143 ~~~~~~ 148 (227)
|++..+
T Consensus 177 D~~~k~ 182 (229)
T PF06176_consen 177 DTQGKR 182 (229)
T ss_pred ECcccc
Confidence 998654
No 456
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.33 E-value=2e-05 Score=61.28 Aligned_cols=138 Identities=12% Similarity=0.127 Sum_probs=87.9
Q ss_pred ecccCc-ceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHHH
Q psy3118 15 IGSGSF-GDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDL 92 (227)
Q Consensus 15 lg~G~f-g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~ 92 (227)
|-.|.. +.||+... .+..+.+|+..... ...+.+|+++++.+..+-.+++++.+...++..++|||++ |.+|...
T Consensus 6 ~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDG--KNPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcC--CCCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 344444 67899874 34688889875433 3467889999999986666788888887767789999999 7766543
Q ss_pred H----------------hhC-CC-----CcCHH------H-----------------------HHHHHHHhc-----ccc
Q psy3118 93 F----------------NFC-SR-----RFSLK------T-----------------------VLLLADQLS-----ITA 116 (227)
Q Consensus 93 ~----------------~~~-~~-----~~~~~------~-----------------------~~~i~~qi~-----lh~ 116 (227)
. ... .- ++... . ...+...+. ...
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 2 100 00 11100 0 000011111 134
Q ss_pred cceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHH
Q psy3118 117 PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIES 158 (227)
Q Consensus 117 ~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (227)
..++|+|+.| |++++. .+...++|++.+....|..+.-.
T Consensus 163 ~~l~HgD~~~~Nil~~~---~~~~~iIDwe~a~~gdp~~Dla~ 202 (244)
T cd05150 163 LVVTHGDACLPNIIVDP---GKFSGFIDLGRLGVADRYQDLAL 202 (244)
T ss_pred eEEECCCCCCccEEEeC---CcEEEEEEccccccccHHHHHHH
Confidence 6789999999 877765 34567999998877666555544
No 457
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.29 E-value=2e-05 Score=58.89 Aligned_cols=121 Identities=13% Similarity=0.202 Sum_probs=85.7
Q ss_pred CeEEEEeeecccCc-ceEEEEEEcCCCcEEEEEEeee---cC--------------------CCCchhhHHHHHHHhcC-
Q psy3118 7 NKYRLGRKIGSGSF-GDIYLGTNISTGEEVAIKLECI---KT--------------------RHPQLHIESKIYKLMQG- 61 (227)
Q Consensus 7 ~~y~~~~~lg~G~f-g~V~~~~~~~~~~~~aiK~~~~---~~--------------------~~~~~~~E~~~l~~l~~- 61 (227)
.+++.++.||.|.- |.||++.. .|+.+|||+... .. ..+.+..|.+...+|+.
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 67999999999999 99999986 788999999221 00 01246779999998873
Q ss_pred -CCCC--CeeEEccccC------------------cEEEEEEeCCCCCHHHHHhhCCCCcCHHHHHHHHHHhc-ccccce
Q psy3118 62 -GVGI--PQIKWCGSEG------------------DYNVMVMELLGPSLEDLFNFCSRRFSLKTVLLLADQLS-ITAPGI 119 (227)
Q Consensus 62 -~~~i--~~~~~~~~~~------------------~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~-lh~~~i 119 (227)
+.+. ++++++..-. ....||.||+... ..++...+..+...+. +|..||
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~---------~~~~~~~~~~~~~dl~~~~k~gI 185 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDD---------PPLQIRDIPQMLRDLKILHKLGI 185 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCc---------cccchhHHHHHHHHHHHHHHCCe
Confidence 3445 7887765211 1256777766221 1467777778888887 999999
Q ss_pred eccCCee-eEEEeeccCCCeeeEEeeec
Q psy3118 120 IDQEQKS-VMVVGTNISTGEEVAIKLEC 146 (227)
Q Consensus 120 iHrDlkp-ni~l~~~~~~~~~~~~~~~~ 146 (227)
+-+|+|+ |.+ + -+++||+.
T Consensus 186 ~~~Dv~~~ny~-~-------G~lvDfs~ 205 (207)
T PF13095_consen 186 VPRDVKPRNYR-G-------GKLVDFSS 205 (207)
T ss_pred eeccCcccccc-C-------CEEEeccc
Confidence 9999999 544 2 24677764
No 458
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.21 E-value=2.1e-06 Score=63.12 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=59.8
Q ss_pred CCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 87 PSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 87 ~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
|+|.++++..+..+++.++..++.|++ +|+.+ || |++++. ++..++ ||.+........
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~---~~~~~~--fG~~~~~~~~~~----- 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW---DGLLKL--DGSVAFKTPEQS----- 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC---ccceee--ccceEeeccccC-----
Confidence 689999987556799999999999998 78777 99 888765 445555 887654322111
Q ss_pred HHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 161 YKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 161 y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
.|++.+..+............++|.+|..++++..+.
T Consensus 65 ----~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 101 (176)
T smart00750 65 ----RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYE 101 (176)
T ss_pred ----CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence 1222211111111111122456788888888887763
No 459
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.12 E-value=2.3e-05 Score=60.01 Aligned_cols=144 Identities=16% Similarity=0.220 Sum_probs=84.9
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CCCCeeEEccc---cCcEEEEEEeCC-C
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VGIPQIKWCGS---EGDYNVMVMELL-G 86 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~~~---~~~~~~lv~e~~-~ 86 (227)
++.++.|..+.||+..... ..+++|..........+.+|..+++.|..+ ..+++++.... .....+++|+++ |
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 4678999999999998633 599999865542335678899999999744 23677776432 334579999999 7
Q ss_pred CCHHH----------------HHh---hC---CCCcCHHH-------------------------HHHHHHHhc------
Q psy3118 87 PSLED----------------LFN---FC---SRRFSLKT-------------------------VLLLADQLS------ 113 (227)
Q Consensus 87 ~~L~~----------------~~~---~~---~~~~~~~~-------------------------~~~i~~qi~------ 113 (227)
.++.+ .+. .. ...+.... ...+..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 77776 111 10 00001000 000111122
Q ss_pred c---cccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHH
Q psy3118 114 I---TAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESK 159 (227)
Q Consensus 114 l---h~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 159 (227)
+ ....++|+|+.| |++++.+ .+++.++||+.+....+..+.-..
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~--~~~i~iID~e~a~~~~~~~Dla~~ 207 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPS--DGRIGIIDFEDAGWGDPAYDLARL 207 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESS--TTEEEE--GTT-EEEETHHHHHHH
T ss_pred hccCCCcEEEEeccccccceeeec--cceeEEEecccceECCHHHHHHHH
Confidence 2 457899999999 8888822 455579999988766665554333
No 460
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.05 E-value=0.00018 Score=59.77 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=53.5
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeec-----C----CCCchhhHHHHHHHhcCC--CCCCeeEEccccCcEEEE
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIK-----T----RHPQLHIESKIYKLMQGG--VGIPQIKWCGSEGDYNVM 80 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~-----~----~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~l 80 (227)
.+.||.|.+..||++.+...++.+.||..... . ..++...|.+.|+.+... ..+|+++.+.. +..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEE
Confidence 46789999999999997543358999985321 1 123567799999987543 46888887754 44679
Q ss_pred EEeCC-CC
Q psy3118 81 VMELL-GP 87 (227)
Q Consensus 81 v~e~~-~~ 87 (227)
|||++ +.
T Consensus 109 VME~L~~~ 116 (401)
T PRK09550 109 VMEDLSDH 116 (401)
T ss_pred EEecCCCc
Confidence 99999 53
No 461
>PLN02876 acyl-CoA dehydrogenase
Probab=98.00 E-value=0.0001 Score=67.10 Aligned_cols=78 Identities=13% Similarity=0.191 Sum_probs=54.8
Q ss_pred EEeeecccCcceEEEEEEcCCC--cEEEEEEeeecC---CCCchhhHHHHHHHhcCCCC--CCeeEEccccC---cEEEE
Q psy3118 11 LGRKIGSGSFGDIYLGTNISTG--EEVAIKLECIKT---RHPQLHIESKIYKLMQGGVG--IPQIKWCGSEG---DYNVM 80 (227)
Q Consensus 11 ~~~~lg~G~fg~V~~~~~~~~~--~~~aiK~~~~~~---~~~~~~~E~~~l~~l~~~~~--i~~~~~~~~~~---~~~~l 80 (227)
-.+.++.|.++.+|+......+ ..+++|..+... ....+.+|.++++.|..+.+ +++++.++.+. +..|+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 3567789999999998754322 467788754332 12357899999999974554 47777776654 46799
Q ss_pred EEeCC-CCC
Q psy3118 81 VMELL-GPS 88 (227)
Q Consensus 81 v~e~~-~~~ 88 (227)
|||++ |..
T Consensus 122 VME~v~G~~ 130 (822)
T PLN02876 122 IMEYLEGRI 130 (822)
T ss_pred EEEecCCcc
Confidence 99999 654
No 462
>KOG2270|consensus
Probab=97.92 E-value=7.4e-05 Score=60.66 Aligned_cols=128 Identities=20% Similarity=0.204 Sum_probs=87.6
Q ss_pred EEeeecccCcceEEEEEEcCCCcEEEEEEeeec------C----------------CCC------chhhHHHHHHHhcCC
Q psy3118 11 LGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK------T----------------RHP------QLHIESKIYKLMQGG 62 (227)
Q Consensus 11 ~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~------~----------------~~~------~~~~E~~~l~~l~~~ 62 (227)
+-.+|..|.-+.||-|. ..+|..+|||+.+.. . ..+ +...|++-|+++. .
T Consensus 148 inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~-~ 225 (520)
T KOG2270|consen 148 INGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLN-N 225 (520)
T ss_pred cccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHH-h
Confidence 45567889999999998 467888999975321 0 001 2456888899987 5
Q ss_pred CCCCeeEEccccCcEEEEEEeCCCCCHH--HHHhhCCCCcCHHHHHHHHHHhc------ccccceeccCCee-eEEEeec
Q psy3118 63 VGIPQIKWCGSEGDYNVMVMELLGPSLE--DLFNFCSRRFSLKTVLLLADQLS------ITAPGIIDQEQKS-VMVVGTN 133 (227)
Q Consensus 63 ~~i~~~~~~~~~~~~~~lv~e~~~~~L~--~~~~~~~~~~~~~~~~~i~~qi~------lh~~~iiHrDlkp-ni~l~~~ 133 (227)
.+|+...-... ....|||+++|.+=+ -.|+ .-.++...+..+-.|++ -+..+.||.||.- |+++-
T Consensus 226 aGIP~PePIlL--k~hVLVM~FlGrdgw~aPkLK--d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-- 299 (520)
T KOG2270|consen 226 AGIPCPEPILL--KNHVLVMEFLGRDGWAAPKLK--DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-- 299 (520)
T ss_pred cCCCCCCceee--ecceEeeeeccCCCCcCcccc--cccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE--
Confidence 56654321111 224799999965422 2233 35677777776666665 5788999999999 88876
Q ss_pred cCCCeeeEEeeeccc
Q psy3118 134 ISTGEEVAIKLECIK 148 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~ 148 (227)
.|.++++|.+-+-
T Consensus 300 --dG~lyiIDVSQSV 312 (520)
T KOG2270|consen 300 --DGKLYIIDVSQSV 312 (520)
T ss_pred --CCEEEEEEccccc
Confidence 5899999987553
No 463
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.83 E-value=0.00034 Score=54.82 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=81.4
Q ss_pred ecccCcceEEEEEEcCCCcEEEEEEeeecCCC--CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHH
Q psy3118 15 IGSGSFGDIYLGTNISTGEEVAIKLECIKTRH--PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLED 91 (227)
Q Consensus 15 lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~ 91 (227)
+..|-.+.+|+.. .++..+++|........ -...+|.++++.+..+.-.++++.... .++||||+ |..+..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 4567778899887 35678889975433222 235779999999985434566665543 26899999 755431
Q ss_pred --------------HHhhC------CCCcCHHH-HHHHHHHh------------c----cc------ccceeccCCee-e
Q psy3118 92 --------------LFNFC------SRRFSLKT-VLLLADQL------------S----IT------APGIIDQEQKS-V 127 (227)
Q Consensus 92 --------------~~~~~------~~~~~~~~-~~~i~~qi------------~----lh------~~~iiHrDlkp-n 127 (227)
.+.+. ..+++... +..+..++ . .. ...++|+|+.| |
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 11111 01122111 11111111 1 01 24689999999 8
Q ss_pred EEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 128 MVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 128 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
+++..+ + ..++|++.+....|..+....+
T Consensus 158 il~~~~---~-~~lIDwE~a~~gdp~~DLa~~~ 186 (256)
T TIGR02721 158 LVVTPQ---G-LKLIDWEYASDGDIALELAAII 186 (256)
T ss_pred EEEeCC---C-CEEEeccccCcCCHHHHHHHHH
Confidence 877642 3 6899999988877776665433
No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.83 E-value=0.00018 Score=55.56 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=48.3
Q ss_pred EeeecccCcce-EEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC--CCCCeeEEccccCc---EEEEEEeCC
Q psy3118 12 GRKIGSGSFGD-IYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG--VGIPQIKWCGSEGD---YNVMVMELL 85 (227)
Q Consensus 12 ~~~lg~G~fg~-V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~---~~~lv~e~~ 85 (227)
++.++.|+... ||+.. ..+++|.-+.......+.+|.+++..|.++ -.++.++..+...+ ..+++|+++
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 35677777664 88752 357788754333334688899999999743 24666666555432 458899999
Q ss_pred -CCCH
Q psy3118 86 -GPSL 89 (227)
Q Consensus 86 -~~~L 89 (227)
|.++
T Consensus 77 ~G~~l 81 (235)
T cd05155 77 EGETA 81 (235)
T ss_pred cCCCC
Confidence 7665
No 465
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.82 E-value=0.00023 Score=56.87 Aligned_cols=144 Identities=12% Similarity=0.057 Sum_probs=84.2
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CCCCeeEEcc------ccCcEEEEEEeC
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VGIPQIKWCG------SEGDYNVMVMEL 84 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~~------~~~~~~~lv~e~ 84 (227)
.+.+..|....+|+... ++..+++|+... .....+..|++++..|..+ -.+++++... ..++..++++++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 56677787788998864 445789998654 3345677899999999632 1355554321 223456899999
Q ss_pred C-CCCHHH-----------HHh---hCCCCc----------CHHH-------------HHHHHHHhc--c-------ccc
Q psy3118 85 L-GPSLED-----------LFN---FCSRRF----------SLKT-------------VLLLADQLS--I-------TAP 117 (227)
Q Consensus 85 ~-~~~L~~-----------~~~---~~~~~~----------~~~~-------------~~~i~~qi~--l-------h~~ 117 (227)
+ |..+.. .+. .....+ .+.. ....+...+ + -..
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 9 655421 011 000000 0000 001111111 1 125
Q ss_pred ceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHH
Q psy3118 118 GIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIY 161 (227)
Q Consensus 118 ~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y 161 (227)
+++|+|+.| |+++.. .+...++||+.+....+..+....+.
T Consensus 176 ~l~HgD~~~~Nil~~~---~~~~~iIDfe~a~~g~~~~Dla~~~~ 217 (296)
T cd05153 176 GVIHADLFRDNVLFDG---DELSGVIDFYFACTDAFLYDLAITLN 217 (296)
T ss_pred cCCccCcCcccEEEeC---CceEEEeehhhhcCchHHHHHHHHHH
Confidence 799999999 777764 34467999998887766666655443
No 466
>KOG2268|consensus
Probab=97.79 E-value=1.8e-05 Score=63.06 Aligned_cols=125 Identities=21% Similarity=0.255 Sum_probs=90.0
Q ss_pred EEEEeeecccCcceEEEEEEcCCCcEEEEEEeeec----------C-------CCC-------chhhHHHHHHHhcCC-C
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIK----------T-------RHP-------QLHIESKIYKLMQGG-V 63 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~----------~-------~~~-------~~~~E~~~l~~l~~~-~ 63 (227)
+.+++.||-|.-+.+|.+-+ ..|++.++|+-+.. . ... ...+|...|+.|..| =
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 57889999999999999986 56889999952111 0 111 246699999999743 2
Q ss_pred CCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc--ccccceeccCCee-eEEEeeccCCCee
Q psy3118 64 GIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS--ITAPGIIDQEQKS-VMVVGTNISTGEE 139 (227)
Q Consensus 64 ~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~--lh~~~iiHrDlkp-ni~l~~~~~~~~~ 139 (227)
.+|+.+++.. -++|||++ |..|..... .-+.+++..-+..++ +-..|+||+|..- |+++.. .+..
T Consensus 173 pVPkpiD~~R----H~Vvmelv~g~Pl~~v~~----v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~d---d~~i 241 (465)
T KOG2268|consen 173 PVPKPIDHNR----HCVVMELVDGYPLRQVRH----VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKD---DDKI 241 (465)
T ss_pred CCCCcccccc----eeeHHHhhcccceeeeee----cCChHHHHHHHHHHHHHHHHcCceecccchheeEEec---CCCE
Confidence 3555555433 38999999 888765433 345566655555555 8899999999999 888876 6789
Q ss_pred eEEeee
Q psy3118 140 VAIKLE 145 (227)
Q Consensus 140 ~~~~~~ 145 (227)
+++||.
T Consensus 242 ~vIDFP 247 (465)
T KOG2268|consen 242 VVIDFP 247 (465)
T ss_pred EEeech
Confidence 999997
No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.78 E-value=0.0016 Score=50.14 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=86.4
Q ss_pred EeeecccCcceEEEEEEcC-CCcEEEEEEeeecCCC-CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 12 GRKIGSGSFGDIYLGTNIS-TGEEVAIKLECIKTRH-PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~-~~~~~aiK~~~~~~~~-~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
.+.|..|-...+|++.... .+..+++|+....... -...+|..+++.+......++++..... .++|||+ |.+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i~G~~ 78 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFIPGRT 78 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEeeCCCc
Confidence 4567778888999987432 3568889975432211 2335799999999755556777654432 4899999 765
Q ss_pred HHH-----------H---HhhC---CCCc----------CH-HHHHHH-------------------------HH----H
Q psy3118 89 LED-----------L---FNFC---SRRF----------SL-KTVLLL-------------------------AD----Q 111 (227)
Q Consensus 89 L~~-----------~---~~~~---~~~~----------~~-~~~~~i-------------------------~~----q 111 (227)
+.. + +... .... +. ..+..+ +. .
T Consensus 79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 158 (235)
T cd05157 79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW 158 (235)
T ss_pred CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence 421 1 1110 1111 11 111111 01 0
Q ss_pred hc--c----cccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHH
Q psy3118 112 LS--I----TAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYK 162 (227)
Q Consensus 112 i~--l----h~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~ 162 (227)
+. + ...+++|+|+.| |+++..+ ++...++||+.+....+..+....+-.
T Consensus 159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~--~~~~~lIDwe~a~~~~~~~Dla~~~~e 214 (235)
T cd05157 159 LKELLSALNSPIVFCHNDLLSGNIIYNEE--KNSVKFIDYEYAGYNYRAFDIANHFNE 214 (235)
T ss_pred HHHHhcccCCCEEEEcCCCCcCcEEEeCC--CCCEEEEEcccCCcCchheeHHHHHHH
Confidence 10 1 245799999999 7777652 357899999988877777766655443
No 468
>KOG3741|consensus
Probab=97.59 E-value=0.00051 Score=57.95 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=85.3
Q ss_pred ceEEEEEEcCCCcEEEEEEeeecCCC--CchhhHHHHHHHhcCCCCCCeeEEcccc----CcEEEEEEeCC--CCCHHHH
Q psy3118 21 GDIYLGTNISTGEEVAIKLECIKTRH--PQLHIESKIYKLMQGGVGIPQIKWCGSE----GDYNVMVMELL--GPSLEDL 92 (227)
Q Consensus 21 g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~E~~~l~~l~~~~~i~~~~~~~~~----~~~~~lv~e~~--~~~L~~~ 92 (227)
.+.|+|....+|..|++|.+..+... ..-..=++.++++. |.|+|++.+.+.+ +..+.+|++|. .++|.++
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 45799999999999999998433221 12233578899998 9999999888773 45699999998 5688887
Q ss_pred HhhC--------------CCCcCHHHHHHHHHHhc-----ccccceeccCCee-eEEEee
Q psy3118 93 FNFC--------------SRRFSLKTVLLLADQLS-----ITAPGIIDQEQKS-VMVVGT 132 (227)
Q Consensus 93 ~~~~--------------~~~~~~~~~~~i~~qi~-----lh~~~iiHrDlkp-ni~l~~ 132 (227)
.=.. +...++..++.++.|+. +|+.|..-+-|.| +|++.-
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G 428 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG 428 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC
Confidence 5321 23577889999999988 9999999899999 666643
No 469
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.54 E-value=0.0037 Score=50.32 Aligned_cols=145 Identities=12% Similarity=0.105 Sum_probs=83.2
Q ss_pred EEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CCCCeeEEcc------ccCcEEEEEEe
Q psy3118 11 LGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VGIPQIKWCG------SEGDYNVMVME 83 (227)
Q Consensus 11 ~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~~------~~~~~~~lv~e 83 (227)
..+.++.|.-..+|++.. . +..+++|+.........+..|.+++..|.++ -.+++++... ...+..++++|
T Consensus 26 ~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 26 SLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred eccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 356677777778998863 3 4467889764433334567788888888622 2255554322 12456789999
Q ss_pred CC-CCCHH-----------HHHh---hCCCCc----------C-HHHH---------------HHHHHHhc---------
Q psy3118 84 LL-GPSLE-----------DLFN---FCSRRF----------S-LKTV---------------LLLADQLS--------- 113 (227)
Q Consensus 84 ~~-~~~L~-----------~~~~---~~~~~~----------~-~~~~---------------~~i~~qi~--------- 113 (227)
|+ |.++. ..+. .....+ + +... ...+.+.+
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 99 64321 1111 100111 0 0000 00000111
Q ss_pred ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 114 ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 114 lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
-...+++|+|+.+ |++++. .+...++||+.+....+..+.....
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~---~~~~~vIDfd~~~~~~~~~DLA~~~ 228 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDG---DSVKGVIDFYFACTDARAYDLAITV 228 (307)
T ss_pred cCCCccCCCCCCcCcEEEEC---CceEEEeecccccCcchHHHHHHHH
Confidence 1247999999999 887765 3456799999888777766665543
No 470
>KOG0195|consensus
Probab=97.53 E-value=9.6e-06 Score=62.71 Aligned_cols=105 Identities=12% Similarity=0.150 Sum_probs=79.9
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC----CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR----HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
.+..+|.....|+.|+|++ .|..++.|++...+. ...+..|...|+-.. ||||..+.+.+..+.++.++..|+
T Consensus 193 nl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeeeec
Confidence 4556678888899999998 455677777654432 234666777777777 999999999999999999999999
Q ss_pred -CCCHHHHHhhC-CCCcCHHHHHHHHHHhc-----cccc
Q psy3118 86 -GPSLEDLFNFC-SRRFSLKTVLLLADQLS-----ITAP 117 (227)
Q Consensus 86 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~-----lh~~ 117 (227)
-|||..++... +-..+..++..++..++ +|+.
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl 308 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL 308 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc
Confidence 99999999875 23456666666666655 7764
No 471
>KOG1023|consensus
Probab=97.52 E-value=0.00011 Score=61.96 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=72.5
Q ss_pred HHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHHHHhhCCCCcCHHHHHHHHHHhc-----ccccce-eccCCee-eE
Q psy3118 57 KLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFCSRRFSLKTVLLLADQLS-----ITAPGI-IDQEQKS-VM 128 (227)
Q Consensus 57 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~-----lh~~~i-iHrDlkp-ni 128 (227)
+.+. |.|+.++++.+.++...+.|.+|| .|+|.|.+......+++.-...+.+.++ +|.-.| .|..+++ |+
T Consensus 2 ~~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 2 RQLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred cccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 4566 999999999999999999999999 9999999987545566665555666655 887655 9999999 98
Q ss_pred EEeeccCCCeeeEEeeeccccC
Q psy3118 129 VVGTNISTGEEVAIKLECIKTR 150 (227)
Q Consensus 129 ~l~~~~~~~~~~~~~~~~~~~~ 150 (227)
+++. .-..++.|||.....
T Consensus 81 lvd~---~w~lklt~~Gl~~~~ 99 (484)
T KOG1023|consen 81 LVDS---RWVLKLTDFGLNSLL 99 (484)
T ss_pred eeee---eEEEEechhhhcccc
Confidence 8887 466889999976544
No 472
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.43 E-value=0.0032 Score=51.57 Aligned_cols=70 Identities=19% Similarity=0.175 Sum_probs=48.6
Q ss_pred eecccCcceEEEEEEcCCCcEEEEEEeeec---------CCCCchhhHHHHHHHhcCC--CCCCeeEEccccCcEEEEEE
Q psy3118 14 KIGSGSFGDIYLGTNISTGEEVAIKLECIK---------TRHPQLHIESKIYKLMQGG--VGIPQIKWCGSEGDYNVMVM 82 (227)
Q Consensus 14 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~---------~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~lv~ 82 (227)
.||-|.-.-||++.+...++.++||.-... -..++...|.+.|+..... ..+|+++.+-. ....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~--e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT--EMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc--ccceehH
Confidence 578899999999997533368999974221 1224667799999887643 25777766543 4456999
Q ss_pred eCC
Q psy3118 83 ELL 85 (227)
Q Consensus 83 e~~ 85 (227)
|++
T Consensus 80 EdL 82 (370)
T TIGR01767 80 EDL 82 (370)
T ss_pred hhC
Confidence 998
No 473
>KOG1033|consensus
Probab=97.36 E-value=4.1e-05 Score=64.04 Aligned_cols=70 Identities=19% Similarity=0.245 Sum_probs=56.8
Q ss_pred EEEEEEeCC-CCCHHHHHhhC--CCCcCHHHHHHHHHHhc--ccccceeccCCee-eEEEeeccCCCeeeEEeeecccc
Q psy3118 77 YNVMVMELL-GPSLEDLFNFC--SRRFSLKTVLLLADQLS--ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKT 149 (227)
Q Consensus 77 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~--lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~ 149 (227)
++|+.|++| ..+|.|++... ....+....+.+..|+. ..-+|.+|||+|| |+.... +.+.++-|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~---d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSD---DDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhcccccccccc---chhhhhhhhhheee
Confidence 589999999 99999999743 34567778888888888 4449999999999 887766 45788899997654
No 474
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.26 E-value=0.0092 Score=49.77 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=51.6
Q ss_pred EEeeecccCcceEEEEEEcCCCcEEEEEEeee-----cC----CCCchhhHHHHHHHhcC--CCCCCeeEEccccCcEEE
Q psy3118 11 LGRKIGSGSFGDIYLGTNISTGEEVAIKLECI-----KT----RHPQLHIESKIYKLMQG--GVGIPQIKWCGSEGDYNV 79 (227)
Q Consensus 11 ~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~-----~~----~~~~~~~E~~~l~~l~~--~~~i~~~~~~~~~~~~~~ 79 (227)
..+.+|.|.-..||+..+ .+..++||.-.. .. ...+...|.+.|+.+.. ...+|+++.++.+. .+
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~--~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTM--AL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCC--CE
Confidence 366789999999999886 355799997542 11 23455668888877653 25788898888744 56
Q ss_pred EEEeCC-C
Q psy3118 80 MVMELL-G 86 (227)
Q Consensus 80 lv~e~~-~ 86 (227)
++||++ +
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 889999 5
No 475
>PRK10593 hypothetical protein; Provisional
Probab=97.24 E-value=0.0029 Score=50.77 Aligned_cols=80 Identities=13% Similarity=0.105 Sum_probs=59.1
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC--CCCCeeEEcccc---CcEEEEEEeC
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG--VGIPQIKWCGSE---GDYNVMVMEL 84 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~---~~~~~lv~e~ 84 (227)
.-.+.||.|..+.||.... ++..+.+|..+.......+..|.+.++.|... -.+|++++.+.. .+..++|||+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 17 SRVECISEQPYAALWALYD--SQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred heeeecCCccceeEEEEEc--CCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 3467899999999999864 33357778743322445789999999999754 468888876653 4668999999
Q ss_pred C-CCCHHH
Q psy3118 85 L-GPSLED 91 (227)
Q Consensus 85 ~-~~~L~~ 91 (227)
+ |.++.+
T Consensus 95 i~G~~~~~ 102 (297)
T PRK10593 95 LRGVSVEA 102 (297)
T ss_pred cCCEecCC
Confidence 9 777655
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.15 E-value=0.015 Score=46.71 Aligned_cols=74 Identities=12% Similarity=0.062 Sum_probs=48.7
Q ss_pred eeecccCcceEEEEEEcC------CCcEEEEEEeeecCC-CCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 13 RKIGSGSFGDIYLGTNIS------TGEEVAIKLECIKTR-HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~------~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
+.+..|--..+|+..... +++.+++|+-..... .....+|.++++.+....-.++++.+... ..|+||+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i 79 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI 79 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence 445556666889887432 257899998544322 23467899999999854455677766543 3588998
Q ss_pred -CCCHH
Q psy3118 86 -GPSLE 90 (227)
Q Consensus 86 -~~~L~ 90 (227)
|..+.
T Consensus 80 ~G~~l~ 85 (302)
T cd05156 80 PSRTLT 85 (302)
T ss_pred CCCcCC
Confidence 76553
No 477
>PRK05231 homoserine kinase; Provisional
Probab=97.14 E-value=0.018 Score=46.50 Aligned_cols=144 Identities=13% Similarity=0.109 Sum_probs=80.7
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CCCCeeEEc------cccCcEEEEEEeC
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VGIPQIKWC------GSEGDYNVMVMEL 84 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~i~~~~~~------~~~~~~~~lv~e~ 84 (227)
.+.++.|....+|+... ++..+++|+.. ......+..|..++..|... -.+++.+.. ....+..++++|+
T Consensus 27 ~~~l~~G~~n~~y~v~t--~~g~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 27 LKGIAEGIENSNFFLTT--TQGEYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred cchhccccccceEEEEe--CCCcEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 34566677778998874 23478999865 22334556688888888622 224454432 1224567999999
Q ss_pred C-CCCHH-----------HHHhhC---CCCc--------C--H-HHHHH------------HHHHhc------c--c---
Q psy3118 85 L-GPSLE-----------DLFNFC---SRRF--------S--L-KTVLL------------LADQLS------I--T--- 115 (227)
Q Consensus 85 ~-~~~L~-----------~~~~~~---~~~~--------~--~-~~~~~------------i~~qi~------l--h--- 115 (227)
+ |..+. ..+... ...+ . + ..... ...+.+ + +
T Consensus 104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 183 (319)
T PRK05231 104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP 183 (319)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence 9 65321 111110 0111 0 1 11100 011111 1 1
Q ss_pred --ccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHH
Q psy3118 116 --APGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIY 161 (227)
Q Consensus 116 --~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y 161 (227)
..|+||+|+.| |+++.. .....++||+.+....+-.+.-....
T Consensus 184 ~lp~~liHgD~~~~Nil~~~---~~~~~iIDf~~~~~~~~~~DlA~~~~ 229 (319)
T PRK05231 184 ALPRGVIHADLFRDNVLFEG---DRLSGFIDFYFACNDKLLYDVAITLN 229 (319)
T ss_pred cCCcccCCCCCCCCcEEEEC---CceEEEEecccccCCchHHHHHHHHH
Confidence 35899999999 877763 33457999998887776666655443
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.02 E-value=0.003 Score=47.15 Aligned_cols=90 Identities=18% Similarity=0.141 Sum_probs=67.0
Q ss_pred hhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-CCCHHHH---HhhCCCCcCHHHHHHHHHHhc-----ccc---c
Q psy3118 50 HIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDL---FNFCSRRFSLKTVLLLADQLS-----ITA---P 117 (227)
Q Consensus 50 ~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~---~~~~~~~~~~~~~~~i~~qi~-----lh~---~ 117 (227)
..|.-+++.+.+.++++++++++-+ +++.||. .+++... +.. -...++.....|+.+++ ++. .
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~-~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQ-FLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccccccc-ccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3488899999977899999998854 7899999 5666432 111 13468999999999998 222 2
Q ss_pred ceeccCCee-eEEEeeccCCCeeeEEeeecc
Q psy3118 118 GIIDQEQKS-VMVVGTNISTGEEVAIKLECI 147 (227)
Q Consensus 118 ~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~ 147 (227)
.+.-+|++| |+.+.. +++.+++|....
T Consensus 82 ~~~lcDv~~~nfgv~~---~~~lk~iDld~v 109 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVND---DGRLKLIDLDDV 109 (188)
T ss_pred cEEEeecchHHeEEeC---CCcEEEEechhc
Confidence 366699999 888875 678999997644
No 479
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.80 E-value=0.033 Score=44.47 Aligned_cols=73 Identities=15% Similarity=0.269 Sum_probs=51.3
Q ss_pred EEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhc--CCCCCCeeEEccccCcEEEEEEeCC
Q psy3118 10 RLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQ--GGVGIPQIKWCGSEGDYNVMVMELL 85 (227)
Q Consensus 10 ~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv~e~~ 85 (227)
+-.+.++.|....+|+.. .+++.+-+|+-. ......+..|.+-|+.|. +.-.+|+++.++...+..||+|||+
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 446778889999999877 577889999876 445567888999999994 3456888998888777779999998
No 480
>PLN02236 choline kinase
Probab=96.77 E-value=0.078 Score=43.54 Aligned_cols=145 Identities=10% Similarity=0.037 Sum_probs=86.1
Q ss_pred EeeecccCcceEEEEEEcC----CCcEEEEEEeeecCCC-CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeCC-
Q psy3118 12 GRKIGSGSFGDIYLGTNIS----TGEEVAIKLECIKTRH-PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL- 85 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~----~~~~~aiK~~~~~~~~-~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 85 (227)
...+-.|-...+|++.... +++.+++|+....... -.-.+|..+++.+....--+++++.+..+ .|.+|+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~ 116 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH 116 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence 3344447777899986422 2467899976443211 12366999999998655566777766443 578888
Q ss_pred CCCHHHH--------------HhhC---CCC----cC-HHHHHHHHHHh---------------------------c---
Q psy3118 86 GPSLEDL--------------FNFC---SRR----FS-LKTVLLLADQL---------------------------S--- 113 (227)
Q Consensus 86 ~~~L~~~--------------~~~~---~~~----~~-~~~~~~i~~qi---------------------------~--- 113 (227)
|.+|..- +.+. ..+ .+ ..++..+..++ +
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 6555311 1100 000 11 11221221111 0
Q ss_pred ccccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHH
Q psy3118 114 ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYK 162 (227)
Q Consensus 114 lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~ 162 (227)
.+...++|+|+++ |++++.+ ++...++||+.+....+..+....+..
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~--~~~~~lID~Eya~~~~~~~Dia~~~~e 244 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEE--TRAITIIDYEYASYNPVAYDIANHFCE 244 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCC--CCcEEEEeehhccccchHHHHHHHHHH
Confidence 2345789999999 8877653 467999999999887777776664433
No 481
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.73 E-value=0.016 Score=48.18 Aligned_cols=72 Identities=22% Similarity=0.247 Sum_probs=50.8
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeee----cC----CCCchhhHHHHHHHhcCC--CCCCeeEEccccCcEEEEE
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECI----KT----RHPQLHIESKIYKLMQGG--VGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~----~~----~~~~~~~E~~~l~~l~~~--~~i~~~~~~~~~~~~~~lv 81 (227)
.+.||-|.-.-||++.+...++.++||.-.. .. ..++...|.++|+..... ..+|+++.+-. ....+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~--e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDS--VMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECc--HHhhHH
Confidence 6678999999999999743457899997422 11 123667799999987643 35777876544 345689
Q ss_pred EeCC
Q psy3118 82 MELL 85 (227)
Q Consensus 82 ~e~~ 85 (227)
||++
T Consensus 112 MEdL 115 (409)
T PRK12396 112 MEDL 115 (409)
T ss_pred HHhC
Confidence 9988
No 482
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=96.59 E-value=0.012 Score=47.09 Aligned_cols=48 Identities=8% Similarity=0.119 Sum_probs=34.7
Q ss_pred cceeccCCee-eEEEeeccC--CCeeeEEeeeccccCCCchhhHHHHHHhh
Q psy3118 117 PGIIDQEQKS-VMVVGTNIS--TGEEVAIKLECIKTRHPQLHIESKIYKLM 164 (227)
Q Consensus 117 ~~iiHrDlkp-ni~l~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~y~~l 164 (227)
.-++|+|.++ |++...+.. ..+..++||..++..+|..+.-.-++..+
T Consensus 215 ~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~~Dl~~fl~~s~ 265 (294)
T PF02958_consen 215 NVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPAIDLAYFLYTSL 265 (294)
T ss_pred eEEEcCccCHHhEeEccccccccccceeeccccccCCCcHhHHHHHHHHCC
Confidence 3479999999 555544321 13788999999998888888777766553
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.45 E-value=0.029 Score=44.54 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=29.2
Q ss_pred ccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhH
Q psy3118 116 APGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIE 157 (227)
Q Consensus 116 ~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (227)
...++|+|+.| |++++.+ ..-..++|++.+....|..+.-
T Consensus 184 ~~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~iGDPa~Dla 224 (276)
T cd05152 184 HTVLVHGDLHPGHILIDED--ARVTGLIDWTEAKVGDPARDFV 224 (276)
T ss_pred CCeeEeCCCCCCcEEEeCC--CCEEEEECcHhcccCCHHHHHH
Confidence 34689999999 7777642 2235699999988877766654
No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.41 E-value=0.037 Score=44.69 Aligned_cols=43 Identities=7% Similarity=0.149 Sum_probs=34.3
Q ss_pred cccceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 115 TAPGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 115 h~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
+...++|+|..+ |+++..+ +..-++||+.+....|..+.....
T Consensus 196 ~~~~lvHGD~~~gNlii~~~---~~~gVlDwe~~~lGDP~~Dl~~~~ 239 (321)
T COG3173 196 GPPVLVHGDYRPGNLIIDPG---RPTGVLDWELATLGDPLEDLAIIC 239 (321)
T ss_pred CCceeeeCCcccCCEEEeCC---CeeEEEeccccccCCcHHHHHHHH
Confidence 456799999999 9988874 448899999999888877665543
No 485
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.28 E-value=0.15 Score=41.62 Aligned_cols=145 Identities=10% Similarity=0.055 Sum_probs=82.2
Q ss_pred EEEEeeecccCcceEEEEEEcCC---CcEEEEEEeeecCCC-CchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEeC
Q psy3118 9 YRLGRKIGSGSFGDIYLGTNIST---GEEVAIKLECIKTRH-PQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMEL 84 (227)
Q Consensus 9 y~~~~~lg~G~fg~V~~~~~~~~---~~~~aiK~~~~~~~~-~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 84 (227)
.++... ..|--..+|+...... +..+.+|+....... -.-.+|..+++.+..+.--+++++++..+ ++.+|
T Consensus 17 i~i~~l-~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~f 91 (330)
T PLN02421 17 FSVERI-SGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSF 91 (330)
T ss_pred eEEEEe-CCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCCc----Eeehh
Confidence 344444 3366677898864322 237888976433221 12356999999998554456777666432 57888
Q ss_pred C-CCCHHH--------------HHhhC-CCC------cC-HHHHHHHHHH--------------------------hc--
Q psy3118 85 L-GPSLED--------------LFNFC-SRR------FS-LKTVLLLADQ--------------------------LS-- 113 (227)
Q Consensus 85 ~-~~~L~~--------------~~~~~-~~~------~~-~~~~~~i~~q--------------------------i~-- 113 (227)
+ |..|.. .++.. ... .+ ...+..+..+ +.
T Consensus 92 i~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 171 (330)
T PLN02421 92 INARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVEL 171 (330)
T ss_pred hcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHH
Confidence 8 654421 11111 111 11 1111111111 10
Q ss_pred ---ccc----cceeccCCee-eEEEeeccCCCeeeEEeeeccccCCCchhhHHHH
Q psy3118 114 ---ITA----PGIIDQEQKS-VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKI 160 (227)
Q Consensus 114 ---lh~----~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 160 (227)
+.. .-++|.|+-| |+++..+ .+...++||+-+....|-.+...-+
T Consensus 172 ~~~~~~~~~~~v~CHnDl~~~NiL~~~~--~~~l~lID~EYag~nd~~fDIa~~f 224 (330)
T PLN02421 172 KEITDSLKAPVVFAHNDLLSGNLMLNED--EGKLYFIDFEYGSYSYRGYDIGNHF 224 (330)
T ss_pred HHHhccCCCCeEEEECCCCcccEEEeCC--CCcEEEEcccccCCCccHHHHHHHH
Confidence 111 2368999999 8888653 4679999999888777776666554
No 486
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.60 E-value=0.22 Score=38.38 Aligned_cols=67 Identities=19% Similarity=0.299 Sum_probs=43.9
Q ss_pred ceEEEEEEcCCC-cEEEEEEeeecCCCCchhhHHHHHHHhcC--CCCCCeeEEccccCcEEEEEEeCC-CCC
Q psy3118 21 GDIYLGTNISTG-EEVAIKLECIKTRHPQLHIESKIYKLMQG--GVGIPQIKWCGSEGDYNVMVMELL-GPS 88 (227)
Q Consensus 21 g~V~~~~~~~~~-~~~aiK~~~~~~~~~~~~~E~~~l~~l~~--~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (227)
|.|..|....+| .++-+|+-.. .....+..|+.=|..+.. --.+++.+.++...++.|+||||+ -+.
T Consensus 27 G~inea~~v~dg~~~~FvK~n~~-~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~ 97 (286)
T COG3001 27 GDINEAWRLRDGTDPFFVKCNQR-EQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGP 97 (286)
T ss_pred ccccceeEeecCCcceEEEecch-hhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCC
Confidence 344444444344 4788886321 223456667766666541 356889999999999999999998 533
No 487
>KOG0606|consensus
Probab=95.43 E-value=0.0026 Score=57.98 Aligned_cols=134 Identities=10% Similarity=0.070 Sum_probs=84.5
Q ss_pred CeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecC-----CCCchhhHHHHHHHhcCCCCCCeeEEccccCcEEEEE
Q psy3118 7 NKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKT-----RHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMV 81 (227)
Q Consensus 7 ~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 81 (227)
+.+.+.+.+-+|+++.++.+.-..+|...++|...... +.+....+-.++-... +|.++.....+......+++
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~-~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPR-SPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCC-CCceecccCCCCCCCCcchh
Confidence 34667778889999999999877777666766543321 1122233333222222 45555544444556678999
Q ss_pred EeCC-CCCHHHHHhhCCCCcCHHHHHHHHHH-hc----ccccceeccCCee-eEEEeeccCCCeeeEEeee
Q psy3118 82 MELL-GPSLEDLFNFCSRRFSLKTVLLLADQ-LS----ITAPGIIDQEQKS-VMVVGTNISTGEEVAIKLE 145 (227)
Q Consensus 82 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~q-i~----lh~~~iiHrDlkp-ni~l~~~~~~~~~~~~~~~ 145 (227)
++|+ +++|...++.. +..+..-++..... +. +|...++|||++| +.+... .+...+.+|+
T Consensus 883 ~~~~~~~~~~Skl~~~-~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~---~gh~~l~~~~ 949 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNS-GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAY---DGHRPLTDFG 949 (1205)
T ss_pred hHHhccCCchhhhhcC-CCcccccccchhHHHHhhhhccccchhhcccccccchhhcc---cCCcccCccc
Confidence 9999 89999888874 44554444333322 22 8998899999999 766655 4445555544
No 488
>KOG1266|consensus
Probab=94.92 E-value=0.044 Score=44.18 Aligned_cols=70 Identities=11% Similarity=0.177 Sum_probs=55.7
Q ss_pred CCCCCeeEEccccCc-----EEEEEEeCC-CCCHHHHHhhC---CCCcCHHHHHHHHHHhc-----ccc--cceeccCCe
Q psy3118 62 GVGIPQIKWCGSEGD-----YNVMVMELL-GPSLEDLFNFC---SRRFSLKTVLLLADQLS-----ITA--PGIIDQEQK 125 (227)
Q Consensus 62 ~~~i~~~~~~~~~~~-----~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~-----lh~--~~iiHrDlk 125 (227)
|.|+++++.++.+.. ...++.||+ .|++..++++. ...+....-..++.||+ ||+ +.|+|..+.
T Consensus 126 HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlT 205 (458)
T KOG1266|consen 126 HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLT 205 (458)
T ss_pred HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcc
Confidence 788999987776533 478999999 99999999864 44678888889999998 775 689999999
Q ss_pred e-eEEEe
Q psy3118 126 S-VMVVG 131 (227)
Q Consensus 126 p-ni~l~ 131 (227)
. .+++.
T Consensus 206 c~tifiq 212 (458)
T KOG1266|consen 206 CDTIFIQ 212 (458)
T ss_pred hhheeec
Confidence 8 44443
No 489
>PTZ00384 choline kinase; Provisional
Probab=94.78 E-value=1.3 Score=37.07 Aligned_cols=73 Identities=19% Similarity=0.214 Sum_probs=45.3
Q ss_pred EeeecccCcceEEEEEEcCC-CcE-----EEEEEeeecCCCC--chhhHHHHHHHhcCCCCCCeeEEccccCcEEEEEEe
Q psy3118 12 GRKIGSGSFGDIYLGTNIST-GEE-----VAIKLECIKTRHP--QLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVME 83 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~-~~~-----~aiK~~~~~~~~~--~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 83 (227)
.+.|..|--..+|++..... +.. |.++.. ...... .-.+|.++++.|..+..-+++++.+.. +++.|
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~-g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~e 129 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKS-STYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQE 129 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEec-cCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEE
Confidence 33444477788999874322 222 333321 111111 125699999999977778888887764 58999
Q ss_pred CC-CCCH
Q psy3118 84 LL-GPSL 89 (227)
Q Consensus 84 ~~-~~~L 89 (227)
|+ |.+|
T Consensus 130 fIeGr~l 136 (383)
T PTZ00384 130 WVEGNTM 136 (383)
T ss_pred EeccccC
Confidence 99 6654
No 490
>KOG1236|consensus
Probab=94.67 E-value=0.052 Score=45.24 Aligned_cols=57 Identities=16% Similarity=0.167 Sum_probs=37.7
Q ss_pred EEEEEeCC-CCCHHHHHhhCCCC--cCHHHHHHHHHHhc--ccccceeccCCee-eEEEeecc
Q psy3118 78 NVMVMELL-GPSLEDLFNFCSRR--FSLKTVLLLADQLS--ITAPGIIDQEQKS-VMVVGTNI 134 (227)
Q Consensus 78 ~~lv~e~~-~~~L~~~~~~~~~~--~~~~~~~~i~~qi~--lh~~~iiHrDlkp-ni~l~~~~ 134 (227)
..++-+|. |-++..+++..+++ +...-+...+.+++ +--.+++|.|+.| |+++..+.
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred ceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 45666788 88988888864322 33333333334444 5667899999999 99887753
No 491
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=94.27 E-value=0.013 Score=40.29 Aligned_cols=47 Identities=21% Similarity=0.280 Sum_probs=34.0
Q ss_pred EeeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhc
Q psy3118 12 GRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQ 60 (227)
Q Consensus 12 ~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~ 60 (227)
.+.||+|+.|+||+|..+ +|+.||||+.+.+ -.+.+...+.+++.+.
T Consensus 16 ~~PlasASiaQVh~a~l~-~g~~VaVKV~rP~-i~~~i~~Dl~~l~~~~ 62 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLK-DGEEVAVKVQRPG-IEEQIEADLRILRRLA 62 (119)
T ss_pred cchhhheehhhheeeeec-ccchhhhhhcchH-HHHHHHHHHHHHHHHH
Confidence 357999999999999954 5999999987443 2234555666666553
No 492
>KOG1033|consensus
Probab=94.17 E-value=0.0058 Score=51.56 Aligned_cols=68 Identities=21% Similarity=0.303 Sum_probs=54.7
Q ss_pred ecCeEEEEeeecccCcceEEEEEEcCCCcEEEEEEeeecCC---CCchhhHHHHHHHhcCCCCCCeeEEccc
Q psy3118 5 VGNKYRLGRKIGSGSFGDIYLGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGS 73 (227)
Q Consensus 5 ~~~~y~~~~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~ 73 (227)
..+.|..+..+|.|+||.|+.+....++..+|||.+..... ..+..+|..-+.++- |++++++...+.
T Consensus 47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~fe-h~g~~~~~ha~~ 117 (516)
T KOG1033|consen 47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFE-HPGIKRYFHAWY 117 (516)
T ss_pred hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhc-ccchhhheecee
Confidence 45678999999999999999999888888999998865432 345677888888887 899988765544
No 493
>PRK06148 hypothetical protein; Provisional
Probab=93.82 E-value=2.2 Score=40.44 Aligned_cols=77 Identities=10% Similarity=0.138 Sum_probs=46.9
Q ss_pred eeecccCcceEEEEEEcCCCcEEEEEEeeecCCCCchhhHHHHHHHhcCC-CC--CCeeEEcc--------cc-Cc--EE
Q psy3118 13 RKIGSGSFGDIYLGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGG-VG--IPQIKWCG--------SE-GD--YN 78 (227)
Q Consensus 13 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~~~-~~--i~~~~~~~--------~~-~~--~~ 78 (227)
+.|+ |..-.+|+.. ..+|..+++|+.+..........|..+|..|..+ +. ++++.-.- .. ++ ..
T Consensus 31 ~~L~-s~~d~nf~v~-~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~ 108 (1013)
T PRK06148 31 TPLD-GERDLNFRLT-TDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRL 108 (1013)
T ss_pred eecC-CcCCceEEEE-eCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEE
Confidence 4565 3457788876 3567789999986654444556677788877643 33 34432111 11 12 46
Q ss_pred EEEEeCC-CCCHHH
Q psy3118 79 VMVMELL-GPSLED 91 (227)
Q Consensus 79 ~lv~e~~-~~~L~~ 91 (227)
+-+++|+ |..+.+
T Consensus 109 vrLl~~l~G~~l~~ 122 (1013)
T PRK06148 109 LRLLSWLPGTPLAE 122 (1013)
T ss_pred EEEEeccCCCcHHh
Confidence 7789999 766654
No 494
>KOG0615|consensus
Probab=93.57 E-value=0.59 Score=38.88 Aligned_cols=87 Identities=25% Similarity=0.225 Sum_probs=58.1
Q ss_pred eeccCCCeeeEEeeeccc-------cCCCc--hhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHc
Q psy3118 131 GTNISTGEEVAIKLECIK-------TRHPQ--LHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFC 201 (227)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~-------~~~~~--~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~ 201 (227)
..+..+++.++++.-..+ ..... ...|..+++.+.. |++-++..+-...++.|||||+.+.. |||++.
T Consensus 191 a~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H-P~IV~~~d~f~~~ds~YmVlE~v~GG--eLfd~v 267 (475)
T KOG0615|consen 191 AYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH-PNIVRIKDFFEVPDSSYMVLEYVEGG--ELFDKV 267 (475)
T ss_pred EEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC-CCEEEEeeeeecCCceEEEEEEecCc--cHHHHH
Confidence 334457888888754221 12222 3478899999988 78888888888888999999999433 445443
Q ss_pred --CCCCCHHHHHHHHHHHHHH
Q psy3118 202 --SRRFSLKTVLLLADQLFLY 220 (227)
Q Consensus 202 --~~~f~~~~~l~l~~ql~~~ 220 (227)
.+.........++.||+..
T Consensus 268 v~nk~l~ed~~K~~f~Qll~a 288 (475)
T KOG0615|consen 268 VANKYLREDLGKLLFKQLLTA 288 (475)
T ss_pred HhccccccchhHHHHHHHHHH
Confidence 3455555566778887654
No 495
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=93.51 E-value=1.8 Score=34.10 Aligned_cols=96 Identities=20% Similarity=0.156 Sum_probs=66.2
Q ss_pred EEEeeccCCCeeeEEeeeccccC---CCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCC
Q psy3118 128 MVVGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRR 204 (227)
Q Consensus 128 i~l~~~~~~~~~~~~~~~~~~~~---~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~ 204 (227)
+....+..+++.++++.-..... ......|...++.+.. +++.++......+...+++|+.++.++.++....+..
T Consensus 21 vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~ 99 (291)
T cd07844 21 VYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKH-ANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGG 99 (291)
T ss_pred EEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCC-cceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCC
Confidence 34444444566777765432211 1223447777877765 6777888777788888999999987888887776678
Q ss_pred CCHHHHHHHHHHHHHHhhhc
Q psy3118 205 FSLKTVLLLADQLFLYNTRL 224 (227)
Q Consensus 205 f~~~~~l~l~~ql~~~~~~~ 224 (227)
++...+..++.|++.-...+
T Consensus 100 ~~~~~~~~~~~ql~~al~~l 119 (291)
T cd07844 100 LSMHNVRLFLFQLLRGLAYC 119 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 88889999888887654443
No 496
>KOG0610|consensus
Probab=93.25 E-value=0.78 Score=38.18 Aligned_cols=94 Identities=20% Similarity=0.193 Sum_probs=70.1
Q ss_pred EEeeccCCCeeeEEeeecc-----ccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeecc-CCCHHHHHhHc-
Q psy3118 129 VVGTNISTGEEVAIKLECI-----KTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELL-GPSLEDLFNFC- 201 (227)
Q Consensus 129 ~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~l-g~~l~~l~~~~- 201 (227)
.+.....++...+++.-.- +..-.+...|..+++.+.. |-+|.++..-.++.+.+++|+++ |.+|.-+..+.
T Consensus 94 yL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH-PFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp 172 (459)
T KOG0610|consen 94 YLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH-PFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQP 172 (459)
T ss_pred EEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC-CccchhhheeeccceeEEEEecCCCccHHHHHhhCC
Confidence 4444444555666664422 2223456678888888877 78899999999999999999999 99999999887
Q ss_pred CCCCCHHHHHHHHHHHHHHhhh
Q psy3118 202 SRRFSLKTVLLLADQLFLYNTR 223 (227)
Q Consensus 202 ~~~f~~~~~l~l~~ql~~~~~~ 223 (227)
++.|+...+.-++-+++...+-
T Consensus 173 ~~~fse~~aRFYaAEvl~ALEY 194 (459)
T KOG0610|consen 173 GKRFSESAARFYAAEVLLALEY 194 (459)
T ss_pred CCccchhhHHHHHHHHHHHHHH
Confidence 7899999998888887765543
No 497
>PHA03209 serine/threonine kinase US3; Provisional
Probab=93.19 E-value=1.2 Score=36.52 Aligned_cols=93 Identities=17% Similarity=0.173 Sum_probs=66.1
Q ss_pred eEEEeeccCCCeeeEEeeeccccCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCC
Q psy3118 127 VMVVGTNISTGEEVAIKLECIKTRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFS 206 (227)
Q Consensus 127 ni~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~ 206 (227)
.+....+..+++.++++.... .....|......+.. +++.++......+...+++++.+..++.+.......+++
T Consensus 81 ~Vy~~~~~~~~~~valK~~~~----~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~ 155 (357)
T PHA03209 81 RVFVATKPGQPDPVVLKIGQK----GTTLIEAMLLQNVNH-PSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLP 155 (357)
T ss_pred EEEEEEECCCCceEEEEeCCc----cccHHHHHHHHhCCC-CCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCC
Confidence 344455544566777775422 223457777777765 677888777777788899999998888887776678899
Q ss_pred HHHHHHHHHHHHHHhhhc
Q psy3118 207 LKTVLLLADQLFLYNTRL 224 (227)
Q Consensus 207 ~~~~l~l~~ql~~~~~~~ 224 (227)
...+..++.|++.-...+
T Consensus 156 ~~~~~~i~~qi~~aL~~L 173 (357)
T PHA03209 156 IDQALIIEKQILEGLRYL 173 (357)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999987654433
No 498
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=93.18 E-value=2.2 Score=33.64 Aligned_cols=93 Identities=18% Similarity=0.139 Sum_probs=63.9
Q ss_pred eeccCCCeeeEEeeeccc---cCCCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCCCCH
Q psy3118 131 GTNISTGEEVAIKLECIK---TRHPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRRFSL 207 (227)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~f~~ 207 (227)
..+..++..++++.-... ........|......+.+ +++.++......+...+++|+++..++.+.+..++..++.
T Consensus 24 ~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~ 102 (288)
T cd07871 24 GRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH-ANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSM 102 (288)
T ss_pred EEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC-CCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCH
Confidence 344445666666643221 111234457777777765 7777887777777888999999977888888777777888
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy3118 208 KTVLLLADQLFLYNTRL 224 (227)
Q Consensus 208 ~~~l~l~~ql~~~~~~~ 224 (227)
..+..++.|+..-...+
T Consensus 103 ~~~~~~~~qi~~aL~~L 119 (288)
T cd07871 103 HNVKIFMFQLLRGLSYC 119 (288)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888887655443
No 499
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=93.12 E-value=0.14 Score=38.40 Aligned_cols=49 Identities=4% Similarity=-0.036 Sum_probs=35.5
Q ss_pred cccceeccCCee-eEEEeeccC--CCeeeEEeeeccccCCCchhhHHHHHHh
Q psy3118 115 TAPGIIDQEQKS-VMVVGTNIS--TGEEVAIKLECIKTRHPQLHIESKIYKL 163 (227)
Q Consensus 115 h~~~iiHrDlkp-ni~l~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~y~~ 163 (227)
+...++|+|+.+ |+++..+.. .....++||..+....|..+.-..++..
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~ 169 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTS 169 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhC
Confidence 456889999999 666654321 1267899999999888877776666543
No 500
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=92.99 E-value=2.5 Score=33.64 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=65.1
Q ss_pred EEEeeccCCCeeeEEeeeccccC---CCchhhHHHHHHhhccCCCCCeeeeccccCCeeEEEeeccCCCHHHHHhHcCCC
Q psy3118 128 MVVGTNISTGEEVAIKLECIKTR---HPQLHIESKIYKLMQGGVGIPQIKWCGSEGDYNVMVMELLGPSLEDLFNFCSRR 204 (227)
Q Consensus 128 i~l~~~~~~~~~~~~~~~~~~~~---~~~~~~e~~~y~~l~g~~g~p~~~~~g~~~~~~~~vm~~lg~~l~~l~~~~~~~ 204 (227)
+....+..+++.++++.-..... ......|...+..+.+ +++..+......+...+++|++++.++.+........
T Consensus 21 V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~ 99 (303)
T cd07869 21 VYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH-ANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGG 99 (303)
T ss_pred EEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC-CCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCC
Confidence 44445544667777775432211 1123456667777655 6777777777777888999999988888777665667
Q ss_pred CCHHHHHHHHHHHHHHhhhc
Q psy3118 205 FSLKTVLLLADQLFLYNTRL 224 (227)
Q Consensus 205 f~~~~~l~l~~ql~~~~~~~ 224 (227)
++...+..++.|++.-...+
T Consensus 100 ~~~~~~~~~~~qi~~al~~l 119 (303)
T cd07869 100 LHPENVKLFLFQLLRGLSYI 119 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 88889999999987755443
Done!