Your job contains 1 sequence.
>psy312
MTQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQT
ECDQKLMNLRDDMAADLYDLEEEYYTSVYK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy312
(90 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0040339 - symbol:MED22 "Mediator complex subunit 2... 356 1.4e-32 1
UNIPROTKB|Q800L3 - symbol:MED22 "Mediator of RNA polymera... 321 7.1e-29 1
UNIPROTKB|Q15528 - symbol:MED22 "Mediator of RNA polymera... 319 1.2e-28 1
UNIPROTKB|Q5T8T8 - symbol:MED22 "Mediator complex subunit... 319 1.2e-28 1
ZFIN|ZDB-GENE-040625-156 - symbol:med22 "mediator complex... 317 1.9e-28 1
UNIPROTKB|E7EN96 - symbol:MED22 "Mediator of RNA polymera... 314 3.9e-28 1
MGI|MGI:98446 - symbol:Med22 "mediator complex subunit 22... 314 3.9e-28 1
RGD|1564893 - symbol:Med22 "mediator complex subunit 22" ... 314 3.9e-28 1
UNIPROTKB|Q5E9K2 - symbol:MED22 "Mediator of RNA polymera... 312 6.4e-28 1
UNIPROTKB|E2QV33 - symbol:MED22 "Uncharacterized protein"... 312 6.4e-28 1
UNIPROTKB|Q5T8T7 - symbol:MED22 "Mediator complex subunit... 286 3.6e-25 1
UNIPROTKB|E9PGW7 - symbol:MED22 "Mediator of RNA polymera... 218 5.8e-18 1
FB|FBgn0052971 - symbol:CG32971 species:7227 "Drosophila ... 202 2.9e-16 1
DICTYBASE|DDB_G0279087 - symbol:med22 "putative mediator ... 170 7.1e-13 1
TAIR|locus:2205130 - symbol:MED22B species:3702 "Arabidop... 152 5.8e-11 1
TAIR|locus:2032920 - symbol:AT1G16430 species:3702 "Arabi... 150 9.4e-11 1
WB|WBGene00007022 - symbol:mdt-22 species:6239 "Caenorhab... 113 7.8e-07 1
>FB|FBgn0040339 [details] [associations]
symbol:MED22 "Mediator complex subunit 22" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA;IC] [GO:0016592 "mediator complex"
evidence=IDA] [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA;IC] [GO:0007067 "mitosis" evidence=IMP]
InterPro:IPR009332 Pfam:PF06179 GO:GO:0007067 EMBL:AE014298
GO:GO:0006357 GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715
KO:K15139 PANTHER:PTHR12434 CTD:6837 GeneTree:ENSGT00390000004339
OMA:VKSIMDN EMBL:AL109630 EMBL:AY071113 RefSeq:NP_569870.1
UniGene:Dm.31032 DIP:DIP-23196N IntAct:Q9V439 MINT:MINT-335358
STRING:Q9V439 PaxDb:Q9V439 PRIDE:Q9V439 EnsemblMetazoa:FBtr0070165
GeneID:31038 KEGG:dme:Dmel_CG3034 FlyBase:FBgn0040339
InParanoid:Q9V439 OrthoDB:EOG4F4QTH PhylomeDB:Q9V439
GenomeRNAi:31038 NextBio:771638 Bgee:Q9V439 Uniprot:Q9V439
Length = 143
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 68/89 (76%), Positives = 78/89 (87%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQCE D EM VRA N+VRAGESL+KLV+D+KQYLILNDF SVNEAIT NS+LFR Q+E
Sbjct: 55 TQCEQDALEMQVRAANMVRAGESLMKLVADLKQYLILNDFHSVNEAITNNSQLFRNTQSE 114
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTSVYK 90
CD+KLM LRD+MA DLYDLEEEYYTS++K
Sbjct: 115 CDKKLMKLRDEMAMDLYDLEEEYYTSIFK 143
>UNIPROTKB|Q800L3 [details] [associations]
symbol:MED22 "Mediator of RNA polymerase II transcription
subunit 22" species:9031 "Gallus gallus" [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR009332
Pfam:PF06179 GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715 KO:K15139
PANTHER:PTHR12434 HOGENOM:HOG000006377 CTD:6837
GeneTree:ENSGT00390000004339 HOVERGEN:HBG058487 OMA:VKSIMDN
OrthoDB:EOG4X3H2K EMBL:AB050009 IPI:IPI00591244 IPI:IPI00818216
RefSeq:NP_001039295.1 UniGene:Gga.42364 STRING:Q800L3
Ensembl:ENSGALT00000005076 Ensembl:ENSGALT00000039339 GeneID:417159
KEGG:gga:417159 InParanoid:Q800L3 NextBio:20820507 Uniprot:Q800L3
Length = 203
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 62/88 (70%), Positives = 75/88 (85%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ R+ Q E
Sbjct: 52 TQSEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAINQRNQQLRSLQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTSVY 89
CD+KL+ LRD+++ DLY+LEEEYY+S Y
Sbjct: 112 CDKKLIALRDEISIDLYELEEEYYSSSY 139
>UNIPROTKB|Q15528 [details] [associations]
symbol:MED22 "Mediator of RNA polymerase II transcription
subunit 22" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009332 Pfam:PF06179 GO:GO:0005737 Reactome:REACT_111045
EMBL:CH471090 EMBL:AL158826 GO:GO:0016592 GO:GO:0001104
eggNOG:NOG271715 KO:K15139 PANTHER:PTHR12434 HOGENOM:HOG000006377
CTD:6837 HOVERGEN:HBG058487 OMA:VKSIMDN OrthoDB:EOG4X3H2K
EMBL:X85178 EMBL:AJ224639 EMBL:AJ224358 EMBL:AJ224359 EMBL:AK124518
EMBL:AK126069 EMBL:BC024225 EMBL:BC040111 IPI:IPI00018040
IPI:IPI00219228 RefSeq:NP_598395.1 RefSeq:NP_852468.1
UniGene:Hs.78354 ProteinModelPortal:Q15528 IntAct:Q15528
MINT:MINT-1397525 STRING:Q15528 PhosphoSite:Q15528 DMDM:6175074
PRIDE:Q15528 DNASU:6837 Ensembl:ENST00000343730
Ensembl:ENST00000344469 Ensembl:ENST00000476080
Ensembl:ENST00000486395 Ensembl:ENST00000491289
Ensembl:ENST00000564120 Ensembl:ENST00000565731
Ensembl:ENST00000566494 Ensembl:ENST00000567581
Ensembl:ENST00000570094 GeneID:6837 KEGG:hsa:6837 UCSC:uc004cdc.3
UCSC:uc004cdd.3 GeneCards:GC09M136205 HGNC:HGNC:11477 HPA:HPA020391
MIM:185641 neXtProt:NX_Q15528 PharmGKB:PA162395486
InParanoid:Q15528 PhylomeDB:Q15528 GenomeRNAi:6837 NextBio:26691
ArrayExpress:Q15528 Bgee:Q15528 CleanEx:HS_MED22
Genevestigator:Q15528 GermOnline:ENSG00000148297 Uniprot:Q15528
Length = 200
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 62/86 (72%), Positives = 74/86 (86%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ RT Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL+ LRD+++ DLY+LEEEYY+S
Sbjct: 112 CDRKLITLRDEISIDLYELEEEYYSS 137
>UNIPROTKB|Q5T8T8 [details] [associations]
symbol:MED22 "Mediator complex subunit 22" species:9606
"Homo sapiens" [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] InterPro:IPR009332 Pfam:PF06179 EMBL:AL158826
GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR12434 HOGENOM:HOG000006377
HOVERGEN:HBG058487 UniGene:Hs.78354 HGNC:HGNC:11477 IPI:IPI01012538
STRING:Q5T8T8 Ensembl:ENST00000446777 Uniprot:Q5T8T8
Length = 137
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 62/86 (72%), Positives = 74/86 (86%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ RT Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL+ LRD+++ DLY+LEEEYY+S
Sbjct: 112 CDRKLITLRDEISIDLYELEEEYYSS 137
>ZFIN|ZDB-GENE-040625-156 [details] [associations]
symbol:med22 "mediator complex subunit 22"
species:7955 "Danio rerio" [GO:0016592 "mediator complex"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009332 Pfam:PF06179
ZFIN:ZDB-GENE-040625-156 GO:GO:0016592 GO:GO:0001104
PANTHER:PTHR12434 GeneTree:ENSGT00390000004339 EMBL:CU019641
EMBL:BX927184 Ensembl:ENSDART00000014347 Bgee:G1K2F7 Uniprot:G1K2F7
Length = 203
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 61/86 (70%), Positives = 75/86 (87%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D +EMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI+ ++ RT Q E
Sbjct: 52 TQAEQDHFEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAISLRNQQLRTLQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL++LRD++A DLY+LEEEYY+S
Sbjct: 112 CDKKLISLRDEIAIDLYELEEEYYSS 137
>UNIPROTKB|E7EN96 [details] [associations]
symbol:MED22 "Mediator of RNA polymerase II transcription
subunit 22" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR009332 Pfam:PF06179
EMBL:AL158826 GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR12434
HGNC:HGNC:11477 IPI:IPI00947131 ProteinModelPortal:E7EN96
PRIDE:E7EN96 Ensembl:ENST00000494177 ArrayExpress:E7EN96
Bgee:E7EN96 Uniprot:E7EN96
Length = 135
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/84 (72%), Positives = 72/84 (85%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ RT Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYY 85
CD+KL+ LRD+++ DLY+LEEEYY
Sbjct: 112 CDRKLITLRDEISIDLYELEEEYY 135
>MGI|MGI:98446 [details] [associations]
symbol:Med22 "mediator complex subunit 22" species:10090 "Mus
musculus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016592 "mediator
complex" evidence=ISO] InterPro:IPR009332 Pfam:PF06179
MGI:MGI:98446 Reactome:REACT_127416 EMBL:AL773563
Reactome:REACT_27166 GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715
KO:K15139 PANTHER:PTHR12434 HOGENOM:HOG000006377 CTD:6837
GeneTree:ENSGT00390000004339 HOVERGEN:HBG058487 OMA:VKSIMDN
OrthoDB:EOG4X3H2K EMBL:X85169 EMBL:AK144744 EMBL:AK161053
EMBL:AK166250 EMBL:AK166474 EMBL:BC018225 IPI:IPI00123503
IPI:IPI00655148 RefSeq:NP_001029080.1 RefSeq:NP_035643.1
UniGene:Mm.397932 IntAct:Q62276 STRING:Q62276 PhosphoSite:Q62276
PaxDb:Q62276 PRIDE:Q62276 Ensembl:ENSMUST00000015920
Ensembl:ENSMUST00000102899 GeneID:20933 KEGG:mmu:20933
UCSC:uc008iwd.1 UCSC:uc008iwe.1 InParanoid:Q62276 NextBio:299867
Bgee:Q62276 CleanEx:MM_MED22 Genevestigator:Q62276
GermOnline:ENSMUSG00000015776 Uniprot:Q62276
Length = 200
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/86 (70%), Positives = 73/86 (84%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ R Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL+ LRD+++ DLY+LEEEYY+S
Sbjct: 112 CDRKLITLRDEVSIDLYELEEEYYSS 137
>RGD|1564893 [details] [associations]
symbol:Med22 "mediator complex subunit 22" species:10116 "Rattus
norvegicus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA;ISO] InterPro:IPR009332 Pfam:PF06179 RGD:1564893
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715 KO:K15139
PANTHER:PTHR12434 HOGENOM:HOG000006377 CTD:6837
GeneTree:ENSGT00390000004339 HOVERGEN:HBG058487 OMA:VKSIMDN
OrthoDB:EOG4X3H2K EMBL:BC127519 EMBL:DN932977 IPI:IPI00211619
IPI:IPI00869894 RefSeq:NP_001071147.1 RefSeq:XP_003749478.1
UniGene:Rn.202721 STRING:A0JPN6 PRIDE:A0JPN6
Ensembl:ENSRNOT00000006720 GeneID:100911917 GeneID:499762
KEGG:rno:100911917 KEGG:rno:499762 UCSC:RGD:1564893
InParanoid:A0JPN6 NextBio:703919 ArrayExpress:A0JPN6
Genevestigator:A0JPN6 Uniprot:A0JPN6
Length = 200
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 61/86 (70%), Positives = 73/86 (84%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ R Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL+ LRD+++ DLY+LEEEYY+S
Sbjct: 112 CDRKLITLRDEVSIDLYELEEEYYSS 137
>UNIPROTKB|Q5E9K2 [details] [associations]
symbol:MED22 "Mediator of RNA polymerase II transcription
subunit 22" species:9913 "Bos taurus" [GO:0016592 "mediator
complex" evidence=IEA] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] InterPro:IPR009332 Pfam:PF06179
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715 KO:K15139
PANTHER:PTHR12434 HOGENOM:HOG000006377 EMBL:BT020918 EMBL:BC148153
IPI:IPI00705251 IPI:IPI00871085 RefSeq:NP_001029914.1
UniGene:Bt.5685 STRING:Q5E9K2 PRIDE:Q5E9K2
Ensembl:ENSBTAT00000015357 GeneID:613736 KEGG:bta:613736 CTD:6837
GeneTree:ENSGT00390000004339 HOVERGEN:HBG058487 InParanoid:Q5E9K2
OMA:VKSIMDN OrthoDB:EOG4X3H2K NextBio:20898738 Uniprot:Q5E9K2
Length = 201
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 61/86 (70%), Positives = 73/86 (84%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ R Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL+ LRD+++ DLY+LEEEYY+S
Sbjct: 112 CDRKLIALRDEVSIDLYELEEEYYSS 137
>UNIPROTKB|E2QV33 [details] [associations]
symbol:MED22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016592 "mediator complex" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] InterPro:IPR009332 Pfam:PF06179 GO:GO:0016592
GO:GO:0001104 PANTHER:PTHR12434 GeneTree:ENSGT00390000004339
OMA:VKSIMDN EMBL:AAEX03006771 Ensembl:ENSCAFT00000031418
Uniprot:E2QV33
Length = 204
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 61/86 (70%), Positives = 73/86 (84%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ R Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEE 111
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTS 87
CD+KL+ LRD+++ DLY+LEEEYY+S
Sbjct: 112 CDRKLIALRDEISIDLYELEEEYYSS 137
>UNIPROTKB|Q5T8T7 [details] [associations]
symbol:MED22 "Mediator complex subunit 22" species:9606
"Homo sapiens" [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] InterPro:IPR009332 Pfam:PF06179 EMBL:AL158826
GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR12434 HOGENOM:HOG000006377
HOVERGEN:HBG058487 UniGene:Hs.78354 HGNC:HGNC:11477 IPI:IPI00644426
STRING:Q5T8T7 Ensembl:ENST00000371999 Uniprot:Q5T8T7
Length = 134
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 59/89 (66%), Positives = 71/89 (79%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRAG ESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ RT Q E
Sbjct: 52 TQGEQDNYEMHVRAG------ESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEE 105
Query: 62 CDQKLMNLRDDMAADLYDLEEEYYTSVYK 90
CD+KL+ LRD+++ DLY+LEEEYY+S YK
Sbjct: 106 CDRKLITLRDEISIDLYELEEEYYSSRYK 134
>UNIPROTKB|E9PGW7 [details] [associations]
symbol:MED22 "Mediator of RNA polymerase II transcription
subunit 22" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR009332 Pfam:PF06179
EMBL:AL158826 GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR12434
HGNC:HGNC:11477 IPI:IPI00645426 ProteinModelPortal:E9PGW7
Ensembl:ENST00000457204 ArrayExpress:E9PGW7 Bgee:E9PGW7
Uniprot:E9PGW7
Length = 111
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
TQ E D YEMHVRA NIVRAGESL+KLVSD+KQ+LILNDFPSVNEAI Q ++ RT Q E
Sbjct: 52 TQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEE 111
>FB|FBgn0052971 [details] [associations]
symbol:CG32971 species:7227 "Drosophila melanogaster"
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR009332 Pfam:PF06179
EMBL:AE014134 GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715
KO:K15139 PANTHER:PTHR12434 GeneTree:ENSGT00390000004339
EMBL:BT024395 EMBL:BT126126 RefSeq:NP_001137823.1
RefSeq:NP_001137824.1 RefSeq:NP_788052.1 UniGene:Dm.34173
EnsemblMetazoa:FBtr0080621 EnsemblMetazoa:FBtr0114462
EnsemblMetazoa:FBtr0114463 GeneID:318271 KEGG:dme:Dmel_CG32971
UCSC:CG32971-RA FlyBase:FBgn0052971 InParanoid:Q86BK9 OMA:YRVENEI
GenomeRNAi:318271 NextBio:845369 Uniprot:Q86BK9
Length = 145
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 2 TQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTE 61
T+ EL+ +EM VRAGN VRAGE+L+KLV D+K+Y I+ D+ ++ E + + S+ K TE
Sbjct: 47 TEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTE 106
Query: 62 CDQKLMNLRDDMAADLYDLEEEYY 85
DQ L+ + D+ +L +LE EYY
Sbjct: 107 YDQTLIKMVKDLEEELSELEYEYY 130
>DICTYBASE|DDB_G0279087 [details] [associations]
symbol:med22 "putative mediator complex subunit 22"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=IEA;ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009332 Pfam:PF06179 dictyBase:DDB_G0279087
GenomeReviews:CM000152_GR GO:GO:0006366 EMBL:AAFI02000027
GO:GO:0016592 GO:GO:0001104 eggNOG:NOG271715 KO:K15139
PANTHER:PTHR12434 OMA:VKSIMDN RefSeq:XP_641857.1
EnsemblProtists:DDB0266933 GeneID:8621863 KEGG:ddi:DDB_G0279087
Uniprot:Q54XB0
Length = 149
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 30/84 (35%), Positives = 54/84 (64%)
Query: 7 DLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTECDQKL 66
++YEM R N++ AGE LLK++ ++KQ LILNDF ++ E + + +F + ++ +
Sbjct: 58 EIYEMETRTSNMLNAGEGLLKIIEELKQNLILNDFSTMAEEVRIQNLVFHKENERTNKSI 117
Query: 67 MNLRDDMAADLYDLEEEYYTSVYK 90
+ ++++ L +LE+EYY S YK
Sbjct: 118 KLISEELSRSLKELEDEYYNSSYK 141
>TAIR|locus:2205130 [details] [associations]
symbol:MED22B species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
InterPro:IPR009332 Pfam:PF06179 EMBL:CP002684 GO:GO:0016592
GO:GO:0001104 EMBL:AC026875 eggNOG:NOG271715 KO:K15139
ProtClustDB:CLSN2687721 PANTHER:PTHR12434 EMBL:BT002871
EMBL:BT020295 EMBL:BT030611 EMBL:AY086596 IPI:IPI00521994
PIR:G86214 RefSeq:NP_563802.1 UniGene:At.43492 IntAct:Q8LCH5
STRING:Q8LCH5 PaxDb:Q8LCH5 PRIDE:Q8LCH5 DNASU:837310
EnsemblPlants:AT1G07950.1 GeneID:837310 KEGG:ath:AT1G07950
TAIR:At1g07950 HOGENOM:HOG000006377 InParanoid:Q9LN12 OMA:ETYMMEM
Genevestigator:Q8LCH5 Uniprot:Q8LCH5
Length = 154
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 7 DLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTECDQKL 66
+ Y M +RA +V+A +SLLKLVS++KQ I + F S+N+ + Q + F + + ++ L
Sbjct: 66 ETYMMEMRASRMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIEEFDQEAEKTNRLL 125
Query: 67 MNLRDDMAADLYDLEEEYYTSVYK 90
+ DD +A+L +LE YY+S +
Sbjct: 126 ARIADDASANLKELESHYYSSAQR 149
>TAIR|locus:2032920 [details] [associations]
symbol:AT1G16430 species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR009332 Pfam:PF06179 EMBL:CP002684 EMBL:AC006341
GO:GO:0016592 GO:GO:0001104 EMBL:AK117750 EMBL:BT003677
EMBL:AY085301 IPI:IPI00517226 PIR:F86299 RefSeq:NP_563997.1
UniGene:At.41882 IntAct:Q9SA42 STRING:Q9SA42 PRIDE:Q9SA42
EnsemblPlants:AT1G16430.1 GeneID:838213 KEGG:ath:AT1G16430
TAIR:At1g16430 eggNOG:NOG271715 InParanoid:Q9SA42 KO:K15139
OMA:NVARVSD PhylomeDB:Q9SA42 ProtClustDB:CLSN2687721
Genevestigator:Q9SA42 PANTHER:PTHR12434 Uniprot:Q9SA42
Length = 150
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 7 DLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQTECDQKL 66
+ Y M +RA +V+A +SLLKLVS++KQ I + F S+N+ + Q F + + ++ L
Sbjct: 63 EAYMMEMRASRLVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIAEFDQEAEKTNRLL 122
Query: 67 MNLRDDMAADLYDLEEEYYTSVYK 90
+ DD +A L +LE YY+S +
Sbjct: 123 ARIADDASASLKELESHYYSSAQR 146
>WB|WBGene00007022 [details] [associations]
symbol:mdt-22 species:6239 "Caenorhabditis elegans"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040017 "positive regulation of locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0030163 "protein
catabolic process" evidence=IMP] InterPro:IPR009332 Pfam:PF06179
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 GO:GO:0040017 GO:GO:0040018
GO:GO:0040035 GO:GO:0030163 GO:GO:0016592 GO:GO:0001104 EMBL:Z49073
KO:K15139 PANTHER:PTHR12434 HOGENOM:HOG000006377
GeneTree:ENSGT00390000004339 PIR:T28127 RefSeq:NP_496216.1
ProteinModelPortal:Q23679 DIP:DIP-26478N IntAct:Q23679
MINT:MINT-1084333 STRING:Q23679 EnsemblMetazoa:ZK970.3
GeneID:174595 KEGG:cel:CELE_ZK970.3 UCSC:ZK970.3 CTD:174595
WormBase:ZK970.3 eggNOG:NOG264706 InParanoid:Q23679 OMA:HFLTHNI
NextBio:884702 Uniprot:Q23679
Length = 157
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 1 MTQCELDLYEMHVRAGNIVRAGESLLKLVSDIKQYLILNDFPSVNEAITQ-NSKLFRTKQ 59
MT+ EM VRA +VRA + LLKL +D+K++LIL+DF + I Q ++ T +
Sbjct: 65 MTEFYTTKNEMAVRAQLMVRASDELLKLTADLKEFLILHDFHFLTHNIKQAEAQCEETLR 124
Query: 60 TECDQKLMNLRDDMAAD-LYDLEEEYYTSVY 89
+ Q N D ++ L+DLE E + Y
Sbjct: 125 QQSHQH--NCLDSEVSNILFDLEREIAENFY 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 90 90 0.00091 102 3 11 22 0.48 29
29 0.39 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 481 (51 KB)
Total size of DFA: 96 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.60u 0.10s 11.70t Elapsed: 00:00:05
Total cpu time: 11.60u 0.10s 11.70t Elapsed: 00:00:05
Start: Thu Aug 15 11:20:31 2013 End: Thu Aug 15 11:20:36 2013