Query psy3121
Match_columns 190
No_of_seqs 34 out of 36
Neff 1.7
Searched_HMMs 13730
Date Fri Aug 16 16:59:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3121.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3121hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ct1a2 g.37.1.1 (A:8-43) Tran 41.2 4 0.00029 23.3 0.8 8 119-126 4-11 (36)
2 d1srka_ g.37.1.1 (A:) Zinc fin 36.9 5 0.00037 23.1 0.8 9 119-127 3-11 (35)
3 d1x6ea1 g.37.1.1 (A:8-40) Zinc 32.1 6.9 0.0005 22.2 0.8 9 119-127 3-11 (33)
4 d1p7aa_ g.37.1.1 (A:) Kruppel- 31.9 6.2 0.00045 22.4 0.6 8 119-126 7-14 (37)
5 d1x6ha2 g.37.1.1 (A:8-43) Tran 29.4 8.1 0.00059 21.8 0.8 11 118-128 3-13 (36)
6 d1ijva_ g.9.1.1 (A:) Beta-defe 23.8 6.5 0.00047 23.8 -0.4 24 142-168 7-30 (36)
7 d2cota2 g.37.1.1 (A:7-44) Zinc 20.4 14 0.00098 20.9 0.6 8 119-126 8-15 (38)
8 d2epsa1 g.37.1.1 (A:408-446) P 19.9 13 0.00096 21.6 0.5 9 118-126 29-37 (39)
9 d2dlka2 g.37.1.1 (A:38-73) Zin 18.5 13 0.00095 21.2 0.2 8 119-126 27-34 (36)
10 d1m9oa_ g.66.1.1 (A:) Tristetr 18.0 18 0.0013 21.1 0.8 11 179-189 15-25 (40)
No 1
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.24 E-value=4 Score=23.34 Aligned_cols=8 Identities=25% Similarity=1.153 Sum_probs=7.0
Q ss_pred cCCCceee
Q psy3121 119 TQHRPFTC 126 (190)
Q Consensus 119 ~qHRPyTC 126 (190)
+++|||.|
T Consensus 4 TgekP~~C 11 (36)
T d2ct1a2 4 SGEKPYEC 11 (36)
T ss_dssp SCCCSEEC
T ss_pred CCCCCEeC
Confidence 57899999
No 2
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.92 E-value=5 Score=23.09 Aligned_cols=9 Identities=44% Similarity=1.062 Sum_probs=7.4
Q ss_pred cCCCceeee
Q psy3121 119 TQHRPFTCF 127 (190)
Q Consensus 119 ~qHRPyTCF 127 (190)
+++|||.|=
T Consensus 3 TGekPy~C~ 11 (35)
T d1srka_ 3 SGKRPFVCR 11 (35)
T ss_dssp SCCSCEECS
T ss_pred CCCccccCC
Confidence 578999994
No 3
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.07 E-value=6.9 Score=22.21 Aligned_cols=9 Identities=22% Similarity=0.992 Sum_probs=7.2
Q ss_pred cCCCceeee
Q psy3121 119 TQHRPFTCF 127 (190)
Q Consensus 119 ~qHRPyTCF 127 (190)
+++|||.|=
T Consensus 3 Tgekpy~C~ 11 (33)
T d1x6ea1 3 SGEKPYGCV 11 (33)
T ss_dssp TTCCCEECS
T ss_pred CCCCCeeCC
Confidence 578999983
No 4
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.92 E-value=6.2 Score=22.42 Aligned_cols=8 Identities=50% Similarity=1.169 Sum_probs=6.8
Q ss_pred cCCCceee
Q psy3121 119 TQHRPFTC 126 (190)
Q Consensus 119 ~qHRPyTC 126 (190)
+++|||.|
T Consensus 7 TgeKPy~C 14 (37)
T d1p7aa_ 7 TGIKPFQC 14 (37)
T ss_dssp CCSSSBCC
T ss_pred CCccCeEe
Confidence 67899998
No 5
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.43 E-value=8.1 Score=21.81 Aligned_cols=11 Identities=36% Similarity=0.948 Sum_probs=8.3
Q ss_pred ccCCCceeeee
Q psy3121 118 CTQHRPFTCFH 128 (190)
Q Consensus 118 C~qHRPyTCF~ 128 (190)
-+++|||.|=.
T Consensus 3 HTgekPy~C~~ 13 (36)
T d1x6ha2 3 HTGEKPYACSH 13 (36)
T ss_dssp CCCCCCEECSS
T ss_pred CCCCCCEECCC
Confidence 36889999943
No 6
>d1ijva_ g.9.1.1 (A:) Beta-defensin, BD {Human (Homo sapiens), HBD1 [TaxId: 9606]}
Probab=23.78 E-value=6.5 Score=23.80 Aligned_cols=24 Identities=29% Similarity=0.674 Sum_probs=20.2
Q ss_pred cCCCCCccCCceeeeeccCCcccCCCC
Q psy3121 142 KRDGSFNYSPDTYCTKYDETTGLCPDG 168 (190)
Q Consensus 142 ~~DGtFNYSPDVYCskYDE~TG~CP~G 168 (190)
+..|+-|||| |+.|+.-.|+|=.|
T Consensus 7 ~~gg~c~~s~---cpl~~ri~gtcy~g 30 (36)
T d1ijva_ 7 SSGGQCLYSA---CPIFTKIQGTCYRG 30 (36)
T ss_dssp HTTCEEESSC---CCTTCCEEEEETTT
T ss_pred cCCceecccc---CcceEeeeeeEecc
Confidence 4679999998 89999998888665
No 7
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.43 E-value=14 Score=20.91 Aligned_cols=8 Identities=25% Similarity=0.941 Sum_probs=6.4
Q ss_pred cCCCceee
Q psy3121 119 TQHRPFTC 126 (190)
Q Consensus 119 ~qHRPyTC 126 (190)
+..|||+|
T Consensus 8 t~ekpy~C 15 (38)
T d2cota2 8 RERRRYKC 15 (38)
T ss_dssp CCSCSSBC
T ss_pred CCCCCEec
Confidence 46789998
No 8
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.87 E-value=13 Score=21.58 Aligned_cols=9 Identities=44% Similarity=0.947 Sum_probs=7.1
Q ss_pred ccCCCceee
Q psy3121 118 CTQHRPFTC 126 (190)
Q Consensus 118 C~qHRPyTC 126 (190)
=+++|||.|
T Consensus 29 Ht~ekpy~C 37 (39)
T d2epsa1 29 HTSERPHKC 37 (39)
T ss_dssp SCCCCCCCS
T ss_pred cCCCcCcCC
Confidence 467889988
No 9
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.54 E-value=13 Score=21.20 Aligned_cols=8 Identities=25% Similarity=0.920 Sum_probs=6.4
Q ss_pred cCCCceee
Q psy3121 119 TQHRPFTC 126 (190)
Q Consensus 119 ~qHRPyTC 126 (190)
++.|||.|
T Consensus 27 tgekpy~C 34 (36)
T d2dlka2 27 SDTRDYIC 34 (36)
T ss_dssp HTSCCCSC
T ss_pred CCCCCEeC
Confidence 47888888
No 10
>d1m9oa_ g.66.1.1 (A:) Tristetraproline (ttp, tis11, nup475) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.02 E-value=18 Score=21.11 Aligned_cols=11 Identities=27% Similarity=0.525 Sum_probs=7.0
Q ss_pred eccccCCCCCC
Q psy3121 179 DETTGLCPDGD 189 (190)
Q Consensus 179 yk~TGsCp~gd 189 (190)
+..+|.||-|+
T Consensus 15 ~~~~g~C~~G~ 25 (40)
T d1m9oa_ 15 YSESGRCRYGA 25 (40)
T ss_dssp GGGTSCCTTTT
T ss_pred hhcCCcCCCCC
Confidence 33467777776
Done!