RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3121
         (190 letters)



>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 221

 Score = 25.9 bits (56), Expect = 2.8
 Identities = 12/68 (17%), Positives = 30/68 (44%)

Query: 75  QETIKLLLIYDYQICLMGILCLKVPRYLKEFRVEQCPLFLQHKCTQHRPFTCFHWHFMNQ 134
           +E  +L+   + +I +     L   R+L +  +E    +++        F  F +  +++
Sbjct: 22  RENTQLMNRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIEKSTPNTVAFNSFFYTNLSE 81

Query: 135 RRRRPVRK 142
           R  + VR+
Sbjct: 82  RGYQGVRR 89


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.140    0.446 

Gapped
Lambda     K      H
   0.267   0.0664    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 753,156
Number of extensions: 34888
Number of successful extensions: 75
Number of sequences better than 10.0: 1
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 7
Length of query: 190
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 110
Effective length of database: 1,309,196
Effective search space: 144011560
Effective search space used: 144011560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.2 bits)