Query psy3125
Match_columns 163
No_of_seqs 118 out of 1121
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 17:04:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3125.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3125hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rbs_A Myomesin-1; immunoglobu 99.9 1.1E-21 3.9E-26 133.4 13.8 151 1-161 22-206 (207)
2 3lcy_A Titin; A-BAND, IG tande 99.9 2.1E-21 7.3E-26 129.9 13.5 150 1-163 27-197 (197)
3 2va4_A NCAM2, N-CAM 2, neural 99.9 8.7E-21 3E-25 126.5 15.8 148 1-161 24-192 (192)
4 2r15_A Myomesin-1; sarcomeric 99.9 1.2E-20 4.2E-25 127.7 15.6 150 1-162 22-210 (212)
5 2yd1_A Tyrosine-protein phosph 99.9 1.2E-20 4.3E-25 128.1 13.7 154 1-163 26-201 (212)
6 3jz7_A MCAR, CAR, coxsackievir 99.9 7.2E-21 2.5E-25 128.7 12.2 162 1-162 20-212 (214)
7 2rik_A Titin; I-SET IG fold, p 99.9 4.1E-20 1.4E-24 130.3 16.1 150 1-161 119-283 (284)
8 2ny1_B T-cell surface glycopro 99.9 2E-20 6.8E-25 124.4 13.1 154 1-163 15-180 (184)
9 2j8h_A Titin, connectin; cardi 99.9 1.5E-20 5E-25 126.1 12.5 152 1-161 24-196 (197)
10 2wv3_A Neuroplastin; igcam, me 99.9 1.9E-19 6.5E-24 120.2 17.7 143 1-161 23-189 (190)
11 3mj6_A Junctional adhesion mol 99.8 3.1E-20 1.1E-24 130.1 14.4 162 1-162 25-237 (268)
12 2rik_A Titin; I-SET IG fold, p 99.8 7.7E-20 2.6E-24 129.0 16.3 151 1-162 25-191 (284)
13 3b43_A Titin; I-SET IG fold, e 99.8 2.9E-20 1E-24 143.2 15.3 150 1-161 404-569 (570)
14 4fa8_A Secreted protein BARF1; 99.8 1.7E-20 5.9E-25 127.2 12.1 152 1-154 13-194 (203)
15 2a38_A Titin; Z1Z2, structural 99.8 1.5E-20 5.3E-25 125.6 11.6 150 1-161 25-194 (194)
16 3kld_A Contactin 4, axcam, BIG 99.8 6.7E-21 2.3E-25 140.2 10.6 148 1-162 225-383 (384)
17 1f97_A Junction adhesion molec 99.8 7.3E-20 2.5E-24 123.7 14.3 156 1-162 21-207 (212)
18 1hng_A CD2; T lymphocyte adhes 99.8 1.2E-20 4.2E-25 125.1 10.2 148 1-161 16-175 (176)
19 2yd6_A PTPRD protein; hydrolas 99.8 1.1E-19 3.6E-24 123.6 14.9 152 1-162 26-204 (212)
20 2v44_A NCAM2, neural cell adhe 99.8 2.1E-19 7E-24 119.8 15.6 150 1-160 22-185 (189)
21 3b43_A Titin; I-SET IG fold, e 99.8 2.6E-19 9E-24 137.9 17.7 149 1-162 311-476 (570)
22 1rhf_A Tyrosine-protein kinase 99.8 1.3E-19 4.6E-24 120.0 13.4 147 1-161 22-182 (182)
23 2ocw_A Polymeric-immunoglobuli 99.8 6.7E-19 2.3E-23 135.6 19.0 163 1-163 351-547 (585)
24 3ojm_B Fibroblast growth facto 99.8 2E-19 7E-24 123.0 14.1 153 1-163 39-222 (231)
25 3esu_F Antibody 14B7* light ch 99.8 3.6E-19 1.2E-23 123.7 15.5 145 1-147 24-231 (250)
26 2jll_A NCAM2, neural cell adhe 99.8 3.6E-19 1.2E-23 130.7 15.8 155 1-161 20-193 (389)
27 1oll_A NK receptor; immune sys 99.8 3E-19 1E-23 119.4 14.1 150 1-162 23-188 (188)
28 2ghw_B Anti-SARS SCFV antibody 99.8 4.7E-19 1.6E-23 122.9 15.3 159 1-161 22-241 (247)
29 3grw_A Fibroblast growth facto 99.8 1.4E-19 4.6E-24 124.9 12.5 152 1-162 35-218 (241)
30 2x1w_L Vascular endothelial gr 99.8 7.4E-19 2.5E-23 119.6 15.9 151 1-163 29-208 (213)
31 3bp6_B Programmed cell death 1 99.8 3.1E-19 1.1E-23 120.2 13.7 154 1-162 22-193 (202)
32 2c5d_C AXL oncogene, tyrosine- 99.8 4.8E-19 1.7E-23 118.6 14.3 150 1-160 22-191 (195)
33 2y23_A Myomesin; structural pr 99.8 5.7E-19 2E-23 125.8 15.5 152 1-162 127-312 (312)
34 3juy_B 3B3 single chain varian 99.8 1E-18 3.5E-23 122.0 16.3 159 1-161 26-256 (256)
35 2y25_A Myomesin; structural pr 99.8 1.7E-19 5.8E-24 128.9 12.5 149 2-162 128-315 (317)
36 3sgj_C Human FCG3A receptor; r 99.8 3.3E-19 1.1E-23 120.9 13.2 136 1-162 27-174 (204)
37 3uzq_A Anti-dengue MAB 4E11; d 99.8 2.7E-18 9.2E-23 119.7 18.2 160 1-162 21-244 (253)
38 2znx_A SCFV; fluorotryptohpan, 99.8 1.5E-18 5.1E-23 120.3 16.8 145 1-147 21-221 (242)
39 1epf_A NCAM, protein (neural c 99.8 1.2E-18 4E-23 116.2 15.6 152 1-160 22-189 (191)
40 3auv_A SC-DSFV derived from th 99.8 5.7E-19 1.9E-23 124.7 14.6 160 1-162 32-254 (276)
41 1nqb_A Single-chain antibody f 99.8 7.3E-19 2.5E-23 123.0 15.0 162 1-162 20-233 (256)
42 1fnl_A Low affinity immunoglob 99.8 3.9E-19 1.3E-23 117.5 12.8 137 1-163 27-175 (175)
43 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 7.6E-19 2.6E-23 122.7 15.0 149 1-150 23-234 (256)
44 2iep_A Muscle-specific kinase 99.8 4.9E-19 1.7E-23 118.0 13.3 150 1-162 27-190 (192)
45 1jbj_A CD3 epsilon and gamma e 99.8 3.3E-20 1.1E-24 124.1 7.3 127 1-152 19-179 (186)
46 3umt_A SCFV heavy chain and li 99.8 1.2E-18 4.1E-23 121.6 15.6 160 1-162 22-245 (256)
47 1nbq_A JAM, junctional adhesio 99.8 8.8E-20 3E-24 123.0 9.4 155 1-161 24-208 (209)
48 2fbo_J V1V2;, variable region- 99.8 5.2E-19 1.8E-23 122.5 13.4 157 1-160 22-250 (250)
49 1f3r_B FV antibody fragment; I 99.8 2.4E-19 8.1E-24 125.4 11.6 162 1-162 20-245 (257)
50 3p2t_A Leukocyte immunoglobuli 99.8 8.5E-20 2.9E-24 122.7 8.9 150 1-162 24-196 (196)
51 2v5m_A Dscam; neurobiology SPL 99.8 4.3E-19 1.5E-23 130.2 13.1 145 1-160 232-387 (388)
52 1vca_A VCAM-D1,2, human vascul 99.8 5.6E-18 1.9E-22 114.6 16.9 148 1-162 21-197 (202)
53 1bih_A Hemolin; insect immunit 99.8 2.6E-19 8.8E-24 131.6 11.1 146 1-161 232-395 (395)
54 2p1y_A Bispecific alpha/beta T 99.8 1.5E-18 5.3E-23 119.6 14.4 146 1-148 20-221 (238)
55 3sbw_C Programmed cell death 1 99.8 6.1E-18 2.1E-22 115.2 17.1 161 1-162 21-211 (222)
56 2nzi_A Titin; IG-domain, FNIII 99.8 8.2E-19 2.8E-23 124.8 13.2 151 1-162 24-197 (305)
57 2zg1_A Sialic acid-binding IG- 99.8 1.4E-18 4.7E-23 117.9 13.7 158 1-160 20-213 (214)
58 3gkz_A Anti-methamphetamine si 99.8 2.7E-18 9.3E-23 119.8 15.5 159 1-161 28-248 (257)
59 3ux9_B SCFV antibody; five hel 99.8 7.8E-19 2.7E-23 122.5 12.3 146 1-148 22-235 (256)
60 2ocw_A Polymeric-immunoglobuli 99.8 6.4E-18 2.2E-22 130.1 18.5 162 1-162 20-221 (585)
61 4frw_A Poliovirus receptor-rel 99.8 7E-18 2.4E-22 113.9 16.5 161 1-161 19-210 (218)
62 1qok_A MFE-23 recombinant anti 99.8 3.6E-18 1.2E-22 121.0 15.6 159 1-162 46-268 (282)
63 3mj8_L Stimulatory hamster ant 99.8 2.5E-19 8.5E-24 121.6 9.2 155 1-157 20-208 (213)
64 3omz_A Human vdelta1 gamma del 99.8 9.4E-19 3.2E-23 122.4 12.3 146 1-146 22-228 (259)
65 1ugn_A LIR1, leukocyte immunog 99.8 4.5E-19 1.5E-23 119.3 9.9 150 1-162 24-198 (198)
66 1uct_A Immunoglobulin alpha FC 99.8 3.1E-19 1.1E-23 122.2 9.2 151 1-163 28-199 (218)
67 1sy6_A T-cell surface glycopro 99.8 7.1E-19 2.4E-23 119.2 10.9 138 1-161 23-203 (204)
68 3qs7_E FL cytokine receptor; i 99.8 9.2E-19 3.1E-23 130.7 12.3 152 1-163 247-415 (423)
69 1ry7_B FGFR-3, fibroblast grow 99.8 3.2E-19 1.1E-23 128.6 9.4 152 1-162 143-327 (334)
70 1svz_A Immunoglobulin;, single 99.8 3.2E-18 1.1E-22 118.8 14.1 146 1-148 21-228 (247)
71 3qs9_E FL cytokine receptor; i 99.8 3.8E-19 1.3E-23 136.1 10.2 151 1-162 247-414 (527)
72 4f80_A Butyrophilin subfamily 99.8 4.7E-18 1.6E-22 116.4 14.4 161 1-161 24-212 (226)
73 1f2q_A High affinity immunoglo 99.8 5.8E-19 2E-23 116.7 9.5 136 1-162 24-171 (176)
74 3k0w_A Mucosa-associated lymph 99.8 1.2E-18 4E-23 119.0 11.2 137 1-162 38-202 (218)
75 1cs6_A Axonin-1; neural cell a 99.8 4.8E-19 1.6E-23 129.8 9.7 145 1-162 227-382 (382)
76 2v5t_A NCAM2, N-CAM 2, neural 99.8 5E-19 1.7E-23 117.7 8.8 150 1-162 22-188 (189)
77 1qz1_A Neural cell adhesion mo 99.8 5.4E-19 1.8E-23 124.9 9.0 151 1-163 120-291 (291)
78 3p3y_A Neurofascin; IG domains 99.8 5.7E-19 2E-23 130.0 9.4 148 1-162 242-403 (404)
79 3laf_A Deleted in colorectal c 99.8 2.8E-18 9.6E-23 126.3 13.1 149 1-162 241-401 (403)
80 4i0k_A CD276 antigen; immunogl 99.8 1.2E-18 4.1E-23 118.8 10.2 163 1-163 15-207 (222)
81 3b5h_A Cervical EMMPRIN, HAB18 99.8 1.4E-17 4.7E-22 110.5 14.6 141 1-163 18-184 (184)
82 2yd9_A Receptor-type tyrosine- 99.8 1.1E-17 3.8E-22 119.2 15.2 143 1-153 26-191 (304)
83 1moe_A Anti-CEA MAB T84.66; an 99.8 1.5E-17 5.1E-22 114.8 15.2 145 1-147 21-218 (240)
84 1hnf_A CD2; T lymphocyte adhes 99.8 9.1E-18 3.1E-22 112.0 13.5 144 8-163 28-182 (182)
85 2gki_A Nuclease; anti-DNA anti 99.8 5.9E-18 2E-22 120.4 13.4 162 1-162 42-272 (291)
86 2gi7_A GPVI protein; IG-like d 99.8 3.3E-19 1.1E-23 118.8 6.5 139 1-160 27-183 (184)
87 3ejj_X Macrophage colony-stimu 99.8 3.2E-18 1.1E-22 120.8 11.9 149 1-162 109-281 (289)
88 3nl4_L Antigen binding fragmen 99.8 6.5E-18 2.2E-22 114.5 12.8 155 1-160 21-208 (213)
89 2gjj_A A21 single-chain antibo 99.8 4.2E-17 1.4E-21 114.6 17.3 146 1-148 25-239 (264)
90 3s97_C Contactin-1; carbonic a 99.8 1E-18 3.5E-23 117.1 8.2 151 1-162 28-201 (201)
91 2yd9_A Receptor-type tyrosine- 99.8 3.1E-18 1.1E-22 122.0 11.1 150 1-163 128-292 (304)
92 4dep_C Interleukin-1 receptor 99.8 2.8E-18 9.6E-23 124.4 10.9 156 1-162 27-217 (349)
93 3d9a_L Light chain of hyhel10 99.8 1.3E-17 4.5E-22 113.0 13.5 156 1-158 21-209 (213)
94 3fku_X Neutralizing antibody F 99.8 5.1E-18 1.7E-22 120.2 11.9 159 1-161 20-249 (280)
95 3ry4_A Low affinity immunoglob 99.8 8.2E-18 2.8E-22 110.2 12.1 135 1-161 24-170 (170)
96 2dru_A Chimera of CD48 antigen 99.8 3.7E-18 1.3E-22 113.6 10.4 147 1-158 19-177 (180)
97 2v9r_A Roundabout homolog 1; p 99.8 1.5E-18 5.3E-23 117.2 8.5 157 1-163 29-203 (212)
98 1wio_A CD4, T-cell surface gly 99.8 1E-17 3.4E-22 122.3 13.3 140 1-161 116-292 (363)
99 2d3v_A Leukocyte immunoglobuli 99.8 2.6E-18 8.8E-23 115.5 9.2 148 1-160 24-195 (196)
100 1p6f_A NKP46, natural cytotoxi 99.8 2.9E-17 9.9E-22 114.2 14.5 150 1-162 26-191 (242)
101 3oq3_B IFN-alpha/beta binding 99.8 8.9E-18 3E-22 121.2 12.3 147 1-161 148-329 (329)
102 1lk3_L 9D7 light chain; antige 99.8 2.6E-17 8.8E-22 111.5 13.7 150 1-152 20-202 (210)
103 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 5.4E-18 1.8E-22 115.9 10.3 158 1-159 20-220 (222)
104 2vr9_A Roundabout 1, ROBO; imm 99.8 2.6E-18 8.8E-23 116.8 8.6 153 1-160 29-204 (217)
105 2ec8_A MAST/stem cell growth f 99.8 6.1E-17 2.1E-21 123.3 17.1 155 1-162 231-411 (524)
106 2wim_A N-CAM 2, NCAM2, neural 99.8 5.3E-18 1.8E-22 119.8 10.1 150 1-162 118-284 (291)
107 3u83_A Poliovirus receptor-rel 99.8 4.2E-18 1.4E-22 122.5 9.5 152 1-163 155-321 (331)
108 1c1e_H Catalytic antibody 1E9 99.8 6.3E-18 2.2E-22 115.2 10.0 158 1-159 20-217 (219)
109 3r4d_A CEA-related cell adhesi 99.8 5.2E-18 1.8E-22 114.5 9.4 156 1-161 19-199 (208)
110 3sob_L Antibody light chain; b 99.8 1.1E-17 3.7E-22 115.0 11.0 155 1-157 44-231 (237)
111 2o26_X MAST/stem cell growth f 99.8 8.2E-18 2.8E-22 119.0 10.6 150 1-163 111-289 (290)
112 1qz1_A Neural cell adhesion mo 99.7 1.1E-16 3.6E-21 113.1 16.3 153 1-161 22-192 (291)
113 1e07_A Carcinoembryonic antige 99.7 3.9E-17 1.3E-21 127.1 15.0 142 1-162 487-640 (642)
114 1ccz_A Protein (CD58); LFA-3, 99.7 2.4E-17 8.3E-22 108.8 11.8 146 1-160 15-169 (171)
115 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 4.2E-17 1.4E-21 114.6 13.7 144 1-146 35-251 (268)
116 4dkd_C Macrophage colony-stimu 99.7 1.8E-17 6E-22 117.2 11.7 150 1-163 109-282 (292)
117 1ry7_B FGFR-3, fibroblast grow 99.7 8.3E-19 2.8E-23 126.4 4.9 147 1-162 28-216 (334)
118 2ifg_A High affinity nerve gro 99.7 1.1E-18 3.7E-23 127.0 5.2 150 1-163 178-346 (347)
119 2wim_A N-CAM 2, NCAM2, neural 99.7 2E-16 7E-21 111.6 16.5 151 1-161 24-190 (291)
120 1mju_H Immunoglobulin MS6-12; 99.7 2.6E-17 9E-22 113.1 11.5 161 1-162 20-217 (227)
121 2y23_A Myomesin; structural pr 99.7 4.5E-17 1.5E-21 116.0 13.0 134 2-146 22-185 (312)
122 3rjd_A High affinity immunoglo 99.7 7.1E-17 2.4E-21 112.3 13.6 136 1-162 21-167 (262)
123 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.1E-16 3.8E-21 109.6 14.3 156 1-156 20-221 (223)
124 2y25_A Myomesin; structural pr 99.7 2.9E-18 1E-22 122.4 6.3 145 1-160 26-198 (317)
125 3m8o_H Immunoglobulin A1 heavy 99.7 1.6E-16 5.4E-21 108.5 14.6 149 1-149 20-210 (221)
126 3qs9_E FL cytokine receptor; i 99.7 2E-17 6.7E-22 126.6 11.0 145 1-162 346-510 (527)
127 3rjd_A High affinity immunoglo 99.7 1E-16 3.4E-21 111.5 13.6 139 1-162 102-262 (262)
128 4fmk_A Poliovirus receptor-rel 99.7 8.3E-17 2.8E-21 109.1 12.9 161 1-161 21-218 (225)
129 3r06_A Anti-mouse CD3epsilon a 99.7 7.4E-17 2.5E-21 109.3 12.5 151 1-153 21-204 (213)
130 2fbj_H IGA-kappa J539 FAB (hea 99.7 2E-16 6.9E-21 108.1 14.8 152 1-152 20-211 (220)
131 1itb_B Type 1 interleukin-1 re 99.7 2.3E-17 8E-22 117.9 10.4 149 1-163 123-315 (315)
132 4fqp_A Poliovirus receptor; im 99.7 8.9E-17 3E-21 115.0 13.4 151 2-162 138-304 (313)
133 3d9a_H Heavy chain of hyhel10 99.7 3.9E-17 1.3E-21 110.6 11.0 152 1-153 20-205 (210)
134 2c1o_A IGK-C protein; FAB frag 99.7 1.3E-16 4.5E-21 111.0 13.7 149 1-151 58-244 (254)
135 3pv7_A B7-H6, IG-like domain-c 99.7 9.1E-17 3.1E-21 111.4 12.9 160 1-160 23-224 (248)
136 2if7_A SLAM family member 6; N 99.7 8.6E-17 2.9E-21 108.0 12.3 145 1-158 18-188 (193)
137 1dn0_B IGM-kappa cold agglutin 99.7 2.2E-16 7.6E-21 108.8 14.0 161 1-161 20-226 (232)
138 1wio_A CD4, T-cell surface gly 99.7 3E-17 1E-21 119.8 9.9 145 1-161 196-362 (363)
139 3s96_B 3B5H10 FAB light chain; 99.7 4.2E-17 1.4E-21 110.8 10.0 153 1-155 20-213 (218)
140 3tv3_L PGT128 light chain, IG 99.7 3.2E-17 1.1E-21 111.0 8.9 152 1-156 20-205 (211)
141 4dep_C Interleukin-1 receptor 99.7 1E-17 3.6E-22 121.4 6.9 147 1-162 140-333 (349)
142 4fom_A Poliovirus receptor-rel 99.7 4.6E-17 1.6E-21 116.1 10.0 151 1-162 134-300 (308)
143 1pz5_B Heavy chain of FAB (SYA 99.7 8.1E-17 2.8E-21 109.8 10.7 156 1-157 20-216 (220)
144 3u83_A Poliovirus receptor-rel 99.7 2.2E-16 7.4E-21 113.5 13.4 160 1-161 34-229 (331)
145 3o4o_C Interleukin-1 receptor 99.7 4.6E-17 1.6E-21 117.6 9.5 151 1-162 38-220 (339)
146 1dr9_A B7-1 (CD80), T lymphocy 99.7 7.8E-16 2.7E-20 103.4 14.4 154 1-158 14-197 (201)
147 2pet_A Lutheran blood group gl 99.7 3.5E-17 1.2E-21 112.0 7.6 155 1-161 20-230 (231)
148 2rcj_C Light chain; immunoglob 99.7 3.9E-16 1.3E-20 118.8 14.0 156 1-158 20-210 (523)
149 3vh8_G Killer cell immunoglobu 99.7 1.5E-16 5E-21 114.1 11.0 151 1-163 138-314 (316)
150 1b6u_A KIR2DL3, P58 killer cel 99.7 2.4E-15 8.1E-20 105.4 16.7 151 1-163 26-202 (257)
151 2ec8_A MAST/stem cell growth f 99.7 2.6E-16 8.7E-21 119.9 12.7 149 1-162 134-309 (524)
152 1op3_H FAB 2G12, heavy chain; 99.7 2.5E-16 8.7E-21 107.9 11.4 149 1-150 20-213 (225)
153 1nkr_A P58-CL42 KIR; inhibitor 99.7 3.2E-16 1.1E-20 105.6 11.7 148 1-160 27-200 (201)
154 4fom_A Poliovirus receptor-rel 99.7 4.4E-16 1.5E-20 111.0 12.9 160 1-161 19-209 (308)
155 1nfd_E H57 FAB; complex (immun 99.7 3.1E-17 1.1E-21 111.2 6.5 152 1-154 19-204 (212)
156 2xzc_L FAB A.17 light chain; i 99.7 7.6E-16 2.6E-20 104.6 13.2 154 1-156 20-209 (216)
157 3liz_H 4C3 monoclonal antibody 99.7 2E-16 6.8E-21 110.4 10.3 159 1-160 20-218 (253)
158 3eow_R Poliovirus receptor; im 99.7 2.6E-16 9E-21 107.3 10.4 160 1-160 19-210 (221)
159 4fqp_A Poliovirus receptor; im 99.7 1.8E-15 6.1E-20 108.2 15.0 160 1-160 20-213 (313)
160 3bkj_L WO2 IGG2A FAB fragment 99.7 1.2E-15 4.2E-20 106.1 13.7 149 1-151 54-240 (252)
161 2j6e_L IGM, FAB light chain; a 99.7 1.4E-16 4.9E-21 109.4 8.8 155 1-157 39-230 (234)
162 3vh8_G Killer cell immunoglobu 99.7 3.6E-16 1.2E-20 112.0 11.2 147 1-162 43-215 (316)
163 3laf_A Deleted in colorectal c 99.7 6.1E-16 2.1E-20 113.8 12.6 151 1-162 141-311 (403)
164 1za6_B IGG heavy chain; immuno 99.7 5.1E-16 1.7E-20 112.6 11.9 150 1-151 20-206 (344)
165 1e07_A Carcinoembryonic antige 99.7 1.5E-15 5E-20 118.3 15.1 140 1-161 131-285 (642)
166 1hxm_B Gamma-delta T-cell rece 99.7 1.6E-15 5.3E-20 105.1 13.5 156 1-158 21-225 (242)
167 1qgc_4 Protein (immunoglobulin 99.7 1.4E-15 4.9E-20 113.1 14.1 151 1-161 136-337 (438)
168 2wng_A Tyrosine-protein phosph 99.7 6.8E-16 2.3E-20 111.0 11.9 149 1-151 23-205 (327)
169 3nl4_H Antigen binding fragmen 99.7 4.3E-16 1.5E-20 105.9 9.9 155 1-160 19-212 (215)
170 1q0x_L FAB 9B1, light chain; a 99.7 6.8E-16 2.3E-20 104.5 10.8 152 1-154 20-207 (212)
171 3dmk_A DOWN syndrome cell adhe 99.7 3.7E-16 1.3E-20 124.5 10.2 151 1-161 639-808 (816)
172 1itb_B Type 1 interleukin-1 re 99.7 1E-16 3.4E-21 114.6 6.0 141 1-152 25-189 (315)
173 4dzb_B Vbeta2 (MAIT T cell rec 99.7 1.7E-15 5.7E-20 104.9 11.9 148 1-149 21-218 (246)
174 3bae_H WO2 IGG2A FAB fragment 99.7 1.4E-15 4.7E-20 104.4 11.4 156 1-157 20-221 (228)
175 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1.2E-15 4E-20 103.7 10.8 152 1-161 38-208 (215)
176 3qhz_H Human monoclonal antibo 99.7 1.4E-15 4.8E-20 104.6 11.3 159 1-160 20-227 (232)
177 1hzh_H IGG, immunoglobulin hea 99.7 1.2E-15 4E-20 114.6 11.7 152 1-153 20-220 (457)
178 3dmk_A DOWN syndrome cell adhe 99.7 1.6E-15 5.4E-20 120.9 13.1 147 1-162 546-713 (816)
179 3v2a_R Vascular endothelial gr 99.7 8.9E-18 3E-22 132.8 0.0 162 1-163 569-757 (772)
180 3qs7_E FL cytokine receptor; i 99.6 2.2E-15 7.4E-20 112.5 12.5 148 1-161 68-227 (423)
181 2xqy_G A13-D6.3 monoclonal ant 99.6 1.6E-15 5.5E-20 106.4 11.2 148 1-149 26-212 (261)
182 3o4o_C Interleukin-1 receptor 99.6 7.6E-17 2.6E-21 116.4 4.5 148 1-160 140-333 (339)
183 3kld_A Contactin 4, axcam, BIG 99.6 1.1E-15 3.7E-20 112.4 10.6 149 1-162 122-294 (384)
184 3oq3_B IFN-alpha/beta binding 99.6 6.1E-16 2.1E-20 111.5 8.8 146 1-162 49-224 (329)
185 1qgc_4 Protein (immunoglobulin 99.6 1.3E-15 4.5E-20 113.3 10.5 151 1-153 21-208 (438)
186 3nfj_J T cell receptor beta ch 99.6 2.7E-15 9.4E-20 103.8 11.3 147 1-148 21-216 (245)
187 3n9g_H FAB fragment of MAB CR4 99.6 5.2E-15 1.8E-19 101.7 12.3 159 1-161 20-224 (230)
188 3tv3_H PGT128 heavy chain, IG 99.6 2.4E-15 8.2E-20 104.1 10.3 159 1-160 20-235 (239)
189 1igt_B IGG2A intact antibody - 99.6 5.6E-15 1.9E-19 110.4 13.0 155 1-156 20-213 (444)
190 1iga_A IGA1; immunoglobulin; N 99.6 1.5E-14 5.2E-19 109.1 15.4 150 1-150 21-214 (475)
191 3bn9_D E2 FAB heavy chain; ant 99.6 2.1E-15 7.3E-20 105.6 9.6 148 1-149 20-217 (257)
192 1cs6_A Axonin-1; neural cell a 99.6 2.7E-15 9.2E-20 109.8 10.1 149 1-162 121-293 (382)
193 3ejj_X Macrophage colony-stimu 99.6 3.8E-15 1.3E-19 105.0 10.5 117 45-161 49-180 (289)
194 3bqu_C 3H6 FAB light chain; be 99.6 2.1E-16 7.3E-21 108.5 3.8 147 1-149 43-222 (233)
195 2v5m_A Dscam; neurobiology SPL 99.6 2.4E-15 8.2E-20 110.2 9.3 153 1-162 123-306 (388)
196 3mjg_X Beta-type platelet-deri 99.6 1.1E-14 3.9E-19 102.7 12.3 142 1-163 115-279 (289)
197 3p3y_A Neurofascin; IG domains 99.6 1.8E-15 6.3E-20 111.2 8.2 149 1-162 136-311 (404)
198 4ei6_B Vbeta16 XV19 type II na 99.6 8.5E-15 2.9E-19 101.2 11.1 146 1-148 22-216 (245)
199 2oz4_A Intercellular adhesion 99.6 1.2E-14 4.1E-19 101.7 11.9 130 1-162 118-264 (265)
200 2rcj_C Light chain; immunoglob 99.6 9.2E-15 3.1E-19 111.3 12.2 150 1-160 134-314 (523)
201 4dkd_C Macrophage colony-stimu 99.6 1.2E-15 4.1E-20 107.7 6.8 143 1-162 24-181 (292)
202 1bih_A Hemolin; insect immunit 99.6 7.3E-15 2.5E-19 107.8 10.9 154 1-162 120-307 (395)
203 2o26_X MAST/stem cell growth f 99.6 4.2E-14 1.4E-18 99.9 14.5 133 1-161 32-182 (290)
204 3u2s_H PG9 heavy chain; greek 99.6 7.4E-15 2.5E-19 102.3 10.1 158 1-159 19-235 (248)
205 3sob_H Antibody heavy chain, l 99.6 1.3E-14 4.4E-19 101.3 11.0 158 1-161 43-250 (256)
206 1igy_B IGG1 intact antibody MA 99.6 2.8E-15 9.7E-20 111.8 8.1 157 1-158 19-211 (434)
207 3qib_D 2B4 beta chain; IG doma 99.6 8.8E-15 3E-19 102.7 10.0 147 1-148 47-241 (270)
208 1c5d_H Monoclonal antibody aga 99.6 2.1E-14 7.4E-19 97.6 11.6 152 1-153 20-207 (215)
209 3pl6_D MBP peptide / T-cell re 99.6 1.9E-14 6.4E-19 100.9 11.4 147 1-148 46-238 (268)
210 2wbj_D OB TCR; transmembrane, 99.6 2.7E-14 9.2E-19 100.8 12.2 148 1-149 44-243 (279)
211 2oz4_A Intercellular adhesion 99.6 6.8E-14 2.3E-18 97.8 14.1 139 1-162 23-182 (265)
212 1ypz_F T-cell receptor gamma c 99.6 7.1E-14 2.4E-18 96.1 13.9 148 1-150 21-215 (230)
213 3q5y_A TCR N15 beta; IG, T cel 99.6 3.8E-14 1.3E-18 97.7 11.7 147 1-148 22-210 (240)
214 3knb_B Obscurin-like protein 1 99.6 7E-15 2.4E-19 89.7 7.1 72 1-83 33-106 (107)
215 1z7z_I Intercellular adhesion 99.6 5.1E-14 1.8E-18 105.2 12.3 142 1-162 208-367 (450)
216 1ypz_E T cell receptor delta, 99.5 1.4E-13 4.7E-18 93.3 12.4 146 1-150 21-197 (207)
217 1z7z_I Intercellular adhesion 99.5 3.7E-14 1.3E-18 106.0 10.0 147 1-162 106-282 (450)
218 3iu4_H CHP3 FAB heavy chain; a 99.5 2.3E-14 7.8E-19 100.6 8.1 154 1-156 20-218 (263)
219 3mlr_H Human monoclonal anti-H 99.5 4.9E-14 1.7E-18 96.7 9.6 155 1-157 20-221 (226)
220 3to4_D NKT vbeta2 (mouse varia 99.5 2.2E-13 7.4E-18 94.8 11.8 145 1-148 21-216 (253)
221 3m45_A Cell adhesion molecule 99.5 2.5E-13 8.6E-18 82.3 10.2 81 1-83 26-107 (108)
222 1gsm_A Madcam-1, mucosal addre 99.5 1.7E-12 5.7E-17 88.1 15.2 128 1-146 27-188 (210)
223 3v2a_R Vascular endothelial gr 99.5 5.4E-13 1.8E-17 105.5 14.4 149 1-162 148-326 (772)
224 2nzi_A Titin; IG-domain, FNIII 99.5 3.7E-13 1.3E-17 95.5 12.0 138 1-151 124-279 (305)
225 2wqr_A IG epsilon chain C regi 99.5 3.2E-14 1.1E-18 102.3 6.4 141 1-150 29-202 (323)
226 1bec_A 14.3.D T cell antigen r 99.5 3.2E-13 1.1E-17 93.2 10.6 147 1-148 19-209 (238)
227 2wqr_A IG epsilon chain C regi 99.5 5.2E-14 1.8E-18 101.2 6.8 142 1-151 133-309 (323)
228 2lu7_A Obscurin-like protein 1 99.5 1.6E-13 5.6E-18 80.0 7.5 69 1-83 16-84 (84)
229 3o3u_N Maltose-binding peripla 99.5 1E-13 3.5E-18 106.8 8.5 144 1-150 386-565 (581)
230 2jll_A NCAM2, neural cell adhe 99.5 1.1E-12 3.9E-17 96.0 13.4 142 1-152 120-278 (389)
231 3knb_A Titin; IG-like, titin, 99.5 8.9E-14 3.1E-18 83.7 6.2 73 1-82 25-99 (100)
232 2yuz_A Myosin-binding protein 99.5 4.1E-13 1.4E-17 80.8 9.0 71 1-85 27-98 (100)
233 1oga_E TRBC1, T-cell receptor 99.5 7.1E-13 2.4E-17 92.2 11.4 148 1-149 23-216 (252)
234 2wng_A Tyrosine-protein phosph 99.5 1.7E-12 5.6E-17 93.3 13.5 150 1-160 137-318 (327)
235 2cqv_A MLCK, myosin light chai 99.5 5E-13 1.7E-17 82.1 9.1 73 1-84 27-101 (114)
236 3u1s_H FAB PGT145 heavy chain; 99.4 3.7E-13 1.3E-17 94.6 8.2 157 1-160 43-263 (267)
237 1z9m_A GAPA225; nectin-like, I 99.4 1.3E-12 4.6E-17 83.6 10.1 84 1-86 58-142 (145)
238 1igt_B IGG2A intact antibody - 99.4 2.7E-13 9.3E-18 101.3 7.2 144 1-153 143-332 (444)
239 4f9p_D 103.2 anti-BTN3A1 antib 99.4 1.8E-11 6.1E-16 83.7 15.3 146 1-146 20-226 (254)
240 3qp3_A Titin; I-SET IG-like, s 99.4 9.6E-13 3.3E-17 79.2 8.1 72 1-83 28-101 (103)
241 1waa_A Titin; metal binding pr 99.4 1.2E-12 4.2E-17 77.6 8.2 68 1-82 25-92 (93)
242 3mjg_X Beta-type platelet-deri 99.4 1.1E-12 3.9E-17 92.4 9.3 141 1-161 20-177 (289)
243 1zvo_C Myeloma immunoglobulin 99.4 1.3E-11 4.5E-16 94.1 15.8 155 1-156 20-226 (512)
244 3rbg_A Cytotoxic and regulator 99.4 1.7E-12 5.8E-17 81.0 9.0 83 1-85 21-104 (124)
245 1he7_A High affinity nerve gro 99.4 7.9E-13 2.7E-17 82.5 7.0 75 1-84 20-101 (126)
246 1hxm_A Gamma-delta T-cell rece 99.4 1.6E-11 5.5E-16 84.4 14.1 146 1-148 21-196 (229)
247 3puc_A Titin; I-SET IG-like do 99.4 1.7E-12 6E-17 77.4 8.0 71 1-82 26-98 (99)
248 1g1c_A Immunoglobulin-like dom 99.4 1.8E-12 6.2E-17 77.4 8.0 72 1-82 25-98 (99)
249 3irg_B Obscurin-like protein 1 99.4 1.1E-12 3.8E-17 79.4 7.1 72 1-83 33-106 (107)
250 2bk8_A Connectin, M1, titin he 99.4 2.5E-12 8.5E-17 76.6 8.5 71 1-82 21-94 (97)
251 1wwb_X Protein (brain derived 99.4 1.5E-12 5.2E-17 78.6 7.1 75 1-84 21-100 (103)
252 2e7c_A Myosin-binding protein 99.4 3.1E-12 1.1E-16 79.0 8.5 72 1-84 44-117 (118)
253 1iga_A IGA1; immunoglobulin; N 99.4 9E-12 3.1E-16 93.9 12.8 149 1-158 146-341 (475)
254 2vol_A Murine IGG FC; FC, zinc 99.4 5E-12 1.7E-16 85.4 10.2 141 1-150 23-196 (207)
255 1gxe_A Myosin binding protein 99.4 2E-12 6.8E-17 82.4 7.3 79 1-81 38-138 (139)
256 2kkq_A Myotilin; unknown funct 99.4 4.3E-12 1.5E-16 78.3 8.7 76 1-85 35-112 (116)
257 2lvc_A Obscurin-like protein 1 99.4 1.2E-12 4E-17 77.4 5.4 65 1-79 26-90 (91)
258 2edn_A Myosin-binding protein 99.4 2.6E-12 9E-17 79.3 7.1 76 1-83 32-117 (118)
259 2dav_A SLOW MYBP-C, myosin-bin 99.3 3.4E-12 1.2E-16 79.7 7.5 78 1-84 27-114 (126)
260 1u2h_A APEG-1, aortic preferen 99.3 4.3E-12 1.5E-16 75.7 7.5 72 1-82 25-98 (99)
261 2edj_A Roundabout homolog 2; K 99.3 3.5E-12 1.2E-16 76.3 6.9 70 1-83 28-99 (100)
262 2kdg_A Myotilin; immonoglobuli 99.3 4.8E-12 1.6E-16 75.6 7.5 73 1-83 25-99 (100)
263 1nct_A Titin; cell adhesion, g 99.3 2.2E-12 7.4E-17 78.3 5.8 70 1-81 34-105 (106)
264 3kvq_A Vascular endothelial gr 99.3 2.8E-12 9.7E-17 77.7 6.2 72 1-85 30-103 (108)
265 2dm2_A Palladin; beta-sandwich 99.3 4E-12 1.4E-16 77.4 6.7 75 1-84 28-104 (110)
266 3irg_A Titin; IG-like, titin, 99.3 8.6E-12 2.9E-16 74.4 7.8 72 1-81 25-98 (100)
267 1fhg_A Telokin; immunoglobulin 99.3 1.2E-11 3.9E-16 80.0 8.8 74 1-84 61-136 (154)
268 2rgs_A I, IG gamma-2B heavy ch 99.3 3.6E-12 1.2E-16 86.8 6.6 141 1-150 31-204 (218)
269 1wit_A Twitchin 18TH IGSF modu 99.3 6.9E-12 2.3E-16 74.1 6.9 69 1-80 22-92 (93)
270 1x44_A Myosin-binding protein 99.3 1.4E-11 4.8E-16 74.2 8.4 70 1-84 27-98 (103)
271 2e6p_A Obscurin-like protein 1 99.3 1.2E-11 4.1E-16 74.5 8.1 69 1-84 30-99 (104)
272 1zox_A CLM-1; IG-superfamily, 99.3 1.2E-11 4.2E-16 75.7 8.1 83 1-83 21-111 (113)
273 2yuv_A Myosin-binding protein 99.3 1.2E-11 4.1E-16 74.0 7.9 69 1-84 28-97 (100)
274 2w59_A IGY FCU3-4; immunoglobu 99.3 9.9E-12 3.4E-16 85.4 8.3 141 1-150 33-216 (231)
275 2k1m_A Myosin-binding protein 99.3 1.1E-11 3.8E-16 73.5 7.5 66 1-81 28-94 (95)
276 4f9l_D 20.1 anti-BTN3A1 antibo 99.3 1.2E-10 4.2E-15 80.0 13.4 143 1-146 21-229 (259)
277 2edf_A Obscurin; beta-sandwich 99.3 8.8E-12 3E-16 75.0 7.0 70 1-84 28-97 (103)
278 1igy_B IGG1 intact antibody MA 99.3 4.2E-13 1.5E-17 100.0 1.3 143 1-152 139-321 (434)
279 3knb_A Titin; IG-like, titin, 99.3 7.9E-12 2.7E-16 75.1 6.7 78 83-162 11-99 (100)
280 2dm3_A KIAA0992 protein, palla 99.3 4.6E-12 1.6E-16 77.1 5.7 75 1-85 29-105 (110)
281 1wwc_A Protein (NT-3 growth fa 99.3 9.2E-12 3.1E-16 76.8 6.6 75 1-84 25-103 (118)
282 2dlt_A Myosin binding protein 99.3 8E-12 2.7E-16 75.7 5.9 70 1-82 28-97 (106)
283 2eny_A Obscurin; beta-sandwich 99.3 5.2E-12 1.8E-16 76.4 4.5 70 1-84 28-99 (104)
284 2edk_A Myosin-binding protein 99.3 1.2E-11 4.2E-16 74.2 6.1 69 1-83 28-100 (101)
285 1g1c_A Immunoglobulin-like dom 99.3 2.2E-11 7.5E-16 72.6 7.1 80 83-163 11-99 (99)
286 2edh_A Obscurin; structural ge 99.2 4.3E-11 1.5E-15 73.2 8.5 69 1-84 39-107 (113)
287 1neu_A Myelin P0 protein; stru 99.2 3.3E-11 1.1E-15 74.7 7.6 84 1-84 19-121 (124)
288 2e7b_A Obscurin; IG-like domai 99.2 2.2E-11 7.6E-16 73.2 6.6 69 1-84 28-97 (103)
289 2cpc_A KIAA0657 protein; immun 99.2 7.6E-11 2.6E-15 72.0 8.9 69 1-84 33-102 (113)
290 3knb_B Obscurin-like protein 1 99.2 4.4E-11 1.5E-15 72.7 7.7 80 83-162 19-105 (107)
291 1i1c_A IGG2A, IG gamma-2A chai 99.2 5.8E-11 2E-15 82.1 9.3 141 1-150 37-210 (239)
292 2cr6_A KIAA1556 protein, obscu 99.2 2E-11 6.8E-16 75.0 6.2 72 1-85 33-105 (115)
293 1hzh_H IGG, immunoglobulin hea 99.2 1.1E-11 3.7E-16 93.0 5.9 144 1-153 152-341 (457)
294 1u2h_A APEG-1, aortic preferen 99.2 4.6E-11 1.6E-15 71.1 7.4 82 82-163 10-99 (99)
295 2c1o_A IGK-C protein; FAB frag 99.2 3.1E-11 1E-15 83.7 7.5 104 54-161 11-149 (254)
296 2ckn_A Basic fibroblast growth 99.2 2.3E-11 7.9E-16 72.2 6.0 65 1-80 29-94 (95)
297 4gos_A V-SET domain-containing 99.2 3.1E-11 1.1E-15 75.4 6.7 80 1-80 25-118 (125)
298 2eo9_A Roundabout homolog 1; b 99.2 1.3E-11 4.5E-16 76.1 4.7 71 1-84 28-100 (118)
299 1pd6_A Cardiac MYBP-C;, myosin 99.2 5.3E-11 1.8E-15 71.9 7.3 66 1-81 36-103 (104)
300 4hwu_A Fibroblast growth facto 99.2 3.1E-11 1.1E-15 71.5 6.1 78 85-162 9-87 (95)
301 2cr3_A Basic fibroblast growth 99.2 2.4E-11 8.3E-16 72.6 5.6 69 1-84 23-92 (99)
302 1l6x_A Immunoglobulin gamma-1 99.2 7.9E-11 2.7E-15 79.4 8.4 140 1-150 23-196 (207)
303 1za6_B IGG heavy chain; immuno 99.2 4E-11 1.4E-15 86.8 7.4 141 1-150 140-329 (344)
304 2edn_A Myosin-binding protein 99.2 4.7E-11 1.6E-15 73.7 6.6 79 84-162 19-116 (118)
305 4hwu_A Fibroblast growth facto 99.2 5.6E-11 1.9E-15 70.4 6.8 68 1-84 21-89 (95)
306 1eaj_A Coxsackie virus and ade 99.2 7.3E-11 2.5E-15 72.9 7.6 83 1-83 25-126 (126)
307 2oyp_A Hepatitis A virus cellu 99.2 6.9E-11 2.3E-15 71.6 7.2 82 1-82 14-108 (109)
308 3cx2_A Myosin-binding protein 99.2 1.2E-10 4E-15 70.7 8.2 75 1-81 24-107 (108)
309 2yr3_A Myosin light chain kina 99.2 3.8E-11 1.3E-15 71.6 5.8 66 1-80 31-98 (99)
310 2eo1_A OBSCN protein, cDNA FLJ 99.2 8.3E-11 2.8E-15 70.5 7.2 69 1-84 31-100 (102)
311 2or8_A Hepatitis A virus cellu 99.2 6.2E-11 2.1E-15 72.7 6.8 82 1-82 17-111 (116)
312 3qp3_A Titin; I-SET IG-like, s 99.2 8.2E-11 2.8E-15 70.6 7.1 79 83-163 14-101 (103)
313 3rrq_A Protein PD-1, programme 99.2 9.5E-11 3.3E-15 73.6 7.4 84 1-84 21-117 (129)
314 3cx2_A Myosin-binding protein 99.2 3.8E-10 1.3E-14 68.4 9.8 78 84-161 11-107 (108)
315 2ptt_A CD48 antigen; CD244, CD 99.2 1.3E-10 4.5E-15 70.7 7.7 79 1-83 23-109 (110)
316 2r15_A Myomesin-1; sarcomeric 99.2 2.3E-10 8E-15 76.8 9.4 73 1-83 137-211 (212)
317 2dav_A SLOW MYBP-C, myosin-bin 99.2 1.4E-10 4.7E-15 72.4 7.6 80 83-162 13-111 (126)
318 1pko_A Myelin oligodendrocyte 99.2 3.6E-10 1.2E-14 71.6 9.6 83 1-83 26-122 (139)
319 2wv3_A Neuroplastin; igcam, me 99.2 4.8E-10 1.6E-14 74.3 10.7 75 1-81 112-189 (190)
320 4gjt_B Poliovirus receptor-rel 99.2 8.1E-11 2.8E-15 73.2 6.5 83 1-83 20-118 (123)
321 2cqv_A MLCK, myosin light chai 99.2 1.1E-10 3.8E-15 71.4 7.0 79 83-163 13-100 (114)
322 2dku_A KIAA1556 protein; beta- 99.2 1.7E-10 5.8E-15 69.3 7.6 69 1-84 28-97 (103)
323 1h5b_A Murine T cell receptor 99.2 2.4E-10 8.2E-15 69.9 8.4 67 1-68 21-92 (113)
324 2kdg_A Myotilin; immonoglobuli 99.2 2.2E-10 7.4E-15 68.3 8.0 80 84-163 12-99 (100)
325 3caf_A Fibroblast growth facto 99.2 5.6E-11 1.9E-15 70.9 5.4 70 1-80 28-99 (100)
326 1mqk_L Antibody 7E2 FV fragmen 99.1 2.5E-10 8.4E-15 70.7 8.4 81 1-83 21-110 (120)
327 2v5y_A Receptor-type tyrosine- 99.1 3.5E-10 1.2E-14 89.6 11.2 150 1-162 96-260 (731)
328 2e6q_A Obscurin-like protein 1 99.1 3.3E-10 1.1E-14 69.3 8.7 70 1-84 28-107 (112)
329 2bk8_A Connectin, M1, titin he 99.1 1.3E-10 4.4E-15 69.0 6.7 81 80-162 4-94 (97)
330 1jhl_L IGG1-kappa D11.15 FV (l 99.1 4.4E-10 1.5E-14 68.2 9.2 67 1-69 21-93 (108)
331 2edj_A Roundabout homolog 2; K 99.1 2.2E-10 7.4E-15 68.4 7.7 81 83-163 14-99 (100)
332 3q0h_A T cell immunoreceptor w 99.1 1.1E-10 3.8E-15 72.0 6.5 78 1-84 23-110 (117)
333 3udw_C Poliovirus receptor; PV 99.1 3.2E-10 1.1E-14 69.4 8.4 83 1-83 20-117 (118)
334 3bp6_A Programmed cell death p 99.1 4.9E-10 1.7E-14 69.0 9.3 83 1-83 19-114 (117)
335 2dm7_A KIAA1556 protein; beta- 99.1 1.4E-10 5E-15 70.2 6.6 69 1-84 28-96 (108)
336 1wit_A Twitchin 18TH IGSF modu 99.1 4.9E-10 1.7E-14 66.0 8.7 76 84-161 9-93 (93)
337 2yuz_A Myosin-binding protein 99.1 1.3E-10 4.3E-15 69.7 6.1 75 84-162 14-95 (100)
338 3m45_A Cell adhesion molecule 99.1 9.2E-10 3.2E-14 66.3 10.0 76 85-162 14-106 (108)
339 2nms_A CMRF35-like-molecule 1; 99.1 3.2E-10 1.1E-14 70.7 8.1 84 1-84 22-113 (124)
340 2j8h_A Titin, connectin; cardi 99.1 2.1E-10 7.2E-15 76.2 7.7 71 1-82 124-197 (197)
341 1nko_A Sialic acid binding IG- 99.1 7.3E-11 2.5E-15 74.2 5.1 84 1-84 26-129 (132)
342 3rbs_A Myomesin-1; immunoglobu 99.1 6.6E-11 2.3E-15 80.1 5.0 66 1-79 136-204 (207)
343 1zvo_C Myeloma immunoglobulin 99.1 3.3E-09 1.1E-13 80.9 14.9 151 1-161 317-504 (512)
344 2q87_A CMRF35-H antigen; all-b 99.1 6.3E-11 2.1E-15 72.2 4.4 69 1-69 16-90 (110)
345 3irg_A Titin; IG-like, titin, 99.1 2.4E-10 8.3E-15 67.9 6.7 78 83-162 11-99 (100)
346 1hkf_A NKP44, NK cell activati 99.1 6.8E-10 2.3E-14 69.0 8.9 80 1-80 30-119 (122)
347 2q20_A VK1 O18/O8 germline lig 99.1 6.5E-10 2.2E-14 67.5 8.5 66 1-68 23-94 (109)
348 2or7_A T-cell immunoglobulin a 99.1 2.4E-10 8.3E-15 70.1 6.7 83 1-83 17-111 (115)
349 2cry_A KIN of IRRE-like protei 99.1 3.2E-11 1.1E-15 74.8 2.5 76 1-83 33-114 (122)
350 3bik_B Programmed cell death p 99.1 1.4E-09 4.8E-14 68.6 10.1 83 1-83 29-124 (134)
351 3puc_A Titin; I-SET IG-like do 99.1 1E-09 3.5E-14 65.1 9.0 79 82-162 11-98 (99)
352 2e27_L Anti-ciguatoxin antibod 99.1 9.7E-10 3.3E-14 67.9 9.1 80 1-82 23-110 (119)
353 1nct_A Titin; cell adhesion, g 99.1 3.5E-10 1.2E-14 68.4 6.9 80 80-161 17-105 (106)
354 2yr3_A Myosin light chain kina 99.1 1.7E-10 5.9E-15 68.7 5.3 80 82-161 16-99 (99)
355 2yc1_B Single chain antibody f 99.1 7.8E-10 2.7E-14 70.8 8.7 82 1-84 36-125 (146)
356 2eys_A NKT15; natural killer T 99.1 3.4E-09 1.2E-13 71.9 12.2 142 1-148 23-186 (210)
357 2aty_A Complement receptor chi 99.1 1.1E-09 3.7E-14 80.5 10.4 140 1-149 188-360 (376)
358 1gl4_B Basement membrane-speci 99.1 5E-10 1.7E-14 66.6 7.1 65 1-81 30-97 (98)
359 1sq2_N Novel antigen receptor; 99.1 7.8E-10 2.7E-14 67.7 8.1 65 1-68 20-87 (113)
360 2coq_A NEW antigen receptor va 99.1 5.6E-10 1.9E-14 67.7 7.4 65 1-68 20-87 (108)
361 3bia_X T-cell immunoglobulin a 99.1 1E-09 3.5E-14 67.4 8.5 83 1-83 16-112 (116)
362 1i8k_A Epidermal growth factor 99.1 1E-09 3.5E-14 66.4 8.4 66 1-68 21-92 (107)
363 3qib_D 2B4 beta chain; IG doma 99.1 3.9E-10 1.3E-14 78.9 7.3 92 54-146 3-120 (270)
364 1qfw_M FV, antibody (anti beta 99.1 5.4E-10 1.8E-14 67.8 7.1 66 1-68 21-92 (108)
365 3kvq_A Vascular endothelial gr 99.1 4E-10 1.4E-14 68.1 6.4 79 85-163 18-101 (108)
366 3s35_X Vascular endothelial gr 99.1 1.3E-10 4.3E-15 71.9 4.3 80 1-84 28-112 (122)
367 1gxe_A Myosin binding protein 99.1 6.4E-10 2.2E-14 70.7 7.5 74 86-161 27-138 (139)
368 2ywz_A NEW antigen receptor va 99.1 5.1E-10 1.7E-14 68.3 6.8 65 1-68 20-87 (111)
369 3s35_X Vascular endothelial gr 99.1 1.5E-09 5.3E-14 66.9 9.1 78 86-163 17-111 (122)
370 3f8u_B Tapasin; endoplasmic re 99.0 1.2E-08 4.2E-13 75.1 14.9 114 45-159 252-399 (401)
371 3bfo_A Mucosa-associated lymph 99.0 3.4E-10 1.1E-14 66.5 5.5 61 1-81 23-86 (91)
372 2e7c_A Myosin-binding protein 99.0 7.9E-10 2.7E-14 68.0 7.4 77 85-163 32-116 (118)
373 1ncn_A T lymphocyte activation 99.0 1.4E-09 4.9E-14 66.0 8.5 64 1-68 14-90 (110)
374 2kkq_A Myotilin; unknown funct 99.0 1.8E-09 6.1E-14 66.3 8.9 79 84-163 22-110 (116)
375 2a38_A Titin; Z1Z2, structural 99.0 6.7E-10 2.3E-14 73.5 7.5 69 1-80 123-193 (194)
376 3khq_A B-cell antigen receptor 99.0 8.2E-10 2.8E-14 69.6 7.4 77 1-83 37-118 (133)
377 2lu7_A Obscurin-like protein 1 99.0 4.1E-09 1.4E-13 61.1 9.9 72 86-162 5-83 (84)
378 1waa_A Titin; metal binding pr 99.0 2.6E-09 8.9E-14 63.1 8.9 78 80-162 8-92 (93)
379 2i24_N NEW antigen receptor PB 99.0 1.6E-09 5.4E-14 67.2 8.2 64 1-67 20-86 (121)
380 3irg_B Obscurin-like protein 1 99.0 1.4E-09 4.7E-14 65.5 7.7 80 83-162 19-105 (107)
381 2ckn_A Basic fibroblast growth 99.0 4.8E-10 1.6E-14 66.3 5.5 76 86-161 18-95 (95)
382 2dm2_A Palladin; beta-sandwich 99.0 1.7E-09 5.9E-14 65.5 8.1 77 85-162 16-102 (110)
383 1i3g_L Antibody FV fragment; a 99.0 1.3E-09 4.3E-14 66.5 7.4 66 1-68 24-95 (111)
384 2z35_A T-cell receptor alpha-c 99.0 7E-10 2.4E-14 67.7 6.2 67 1-67 20-92 (112)
385 2va4_A NCAM2, N-CAM 2, neural 99.0 1.1E-09 3.7E-14 72.4 7.6 76 1-80 114-191 (192)
386 1gl4_B Basement membrane-speci 99.0 4.9E-10 1.7E-14 66.6 5.4 77 85-162 18-98 (98)
387 2dm3_A KIAA0992 protein, palla 99.0 6.9E-10 2.4E-14 67.3 5.9 80 83-163 15-103 (110)
388 3bfo_A Mucosa-associated lymph 99.0 7.5E-10 2.6E-14 64.9 5.9 79 78-161 4-86 (91)
389 3lcy_A Titin; A-BAND, IG tande 99.0 1.4E-09 4.8E-14 72.0 7.8 71 1-82 123-196 (197)
390 3moq_A NEW antigen receptor va 99.0 1.1E-09 3.8E-14 68.4 6.8 64 1-67 20-86 (126)
391 1xed_A Polymeric-immunoglobuli 99.0 1.6E-09 5.4E-14 66.8 7.4 82 1-82 20-111 (117)
392 2v5t_A NCAM2, N-CAM 2, neural 99.0 1.3E-09 4.4E-14 71.8 7.3 69 1-82 118-188 (189)
393 2xt1_B Camelid VHH 9; viral pr 99.0 3.5E-09 1.2E-13 65.6 8.9 67 1-67 22-101 (121)
394 1fo0_A Protein (BM3.3 T cell r 99.0 6.3E-10 2.1E-14 68.4 5.3 68 1-68 20-95 (116)
395 2d9c_A Signal-regulatory prote 99.0 9.1E-10 3.1E-14 69.5 6.2 84 1-86 28-125 (136)
396 2ens_A Advanced glycosylation 99.0 2.2E-10 7.4E-15 68.0 3.0 61 1-81 30-94 (96)
397 2cr3_A Basic fibroblast growth 99.0 3.8E-10 1.3E-14 67.4 4.1 76 87-162 13-90 (99)
398 1wwb_X Protein (brain derived 99.0 1.2E-09 4.3E-14 65.6 6.0 72 92-163 16-99 (103)
399 3rbg_A Cytotoxic and regulator 99.0 2.1E-09 7.3E-14 66.7 7.1 75 86-162 10-101 (124)
400 2qhl_A Novel immune-type recep 99.0 2E-09 6.7E-14 65.6 6.7 66 1-68 19-97 (111)
401 2p45_B Antibody CAB-RN05; seMe 99.0 7E-09 2.4E-13 64.3 9.2 68 1-68 22-102 (123)
402 2atp_B T-cell surface glycopro 99.0 1.6E-09 5.6E-14 66.3 6.2 68 1-68 18-100 (115)
403 1pko_A Myelin oligodendrocyte 99.0 5.7E-09 1.9E-13 65.9 8.9 86 77-162 6-121 (139)
404 2edo_A CD48 antigen; beta-sand 99.0 2.4E-10 8.3E-15 70.9 2.4 85 1-89 24-117 (121)
405 1tvd_A T cell receptor, ES204 99.0 2.5E-09 8.5E-14 65.6 7.0 68 1-68 20-97 (116)
406 2qsq_A Carcinoembryonic antige 99.0 1.8E-09 6.2E-14 65.9 6.2 46 33-83 63-110 (111)
407 3r0n_A Poliovirus receptor-rel 98.9 1.7E-09 5.7E-14 67.4 6.2 80 1-80 22-128 (128)
408 3bj9_1 Immunoglobulin IOTA cha 98.9 4.9E-09 1.7E-13 64.3 8.1 81 1-81 18-113 (116)
409 1fhg_A Telokin; immunoglobulin 98.9 8.7E-09 3E-13 66.3 9.6 79 83-162 47-134 (154)
410 1xt5_A Variable region-contain 98.9 1.1E-08 3.7E-13 64.1 9.9 87 77-163 4-134 (135)
411 3udw_C Poliovirus receptor; PV 98.9 3E-09 1E-13 64.9 7.0 83 79-162 3-116 (118)
412 1u3h_A T-cell receptor alpha-c 98.5 8.7E-11 3E-15 71.6 0.0 68 1-68 19-92 (110)
413 1ow0_A IG alpha-1 chain C regi 98.9 4.3E-10 1.5E-14 76.2 3.4 139 1-150 24-199 (214)
414 1xt5_A Variable region-contain 98.9 6.5E-09 2.2E-13 65.2 8.6 79 1-82 24-133 (135)
415 3b5h_A Cervical EMMPRIN, HAB18 98.9 2.3E-09 7.9E-14 70.5 6.8 74 1-81 103-182 (184)
416 3caf_A Fibroblast growth facto 98.9 2.5E-09 8.6E-14 63.6 6.4 75 87-161 18-100 (100)
417 4fa8_A Secreted protein BARF1; 98.9 1.5E-09 5.3E-14 73.2 6.0 71 1-78 126-197 (203)
418 2yc1_A Single chain antibody f 98.9 5.1E-09 1.7E-13 64.3 7.8 68 1-68 20-100 (117)
419 1eeq_A Kappa-4 immunoglobulin 98.9 5.5E-09 1.9E-13 63.9 7.9 66 1-68 21-98 (114)
420 1qfo_A Protein (sialoadhesin); 98.9 1.7E-09 5.9E-14 66.6 5.6 81 1-81 20-117 (119)
421 2iep_A Muscle-specific kinase 98.9 1.3E-09 4.5E-14 72.0 5.4 69 1-83 120-191 (192)
422 1eaj_A Coxsackie virus and ade 98.9 8.4E-10 2.9E-14 68.1 4.1 37 126-162 88-125 (126)
423 1u9k_A Triggering receptor exp 98.9 1E-09 3.5E-14 67.2 4.5 69 1-69 19-98 (114)
424 3uto_A Twitchin; kinase, muscl 98.9 3.1E-09 1E-13 82.2 8.1 70 1-81 502-573 (573)
425 2eo9_A Roundabout homolog 1; b 98.9 4.2E-09 1.4E-13 64.7 7.2 79 84-162 15-98 (118)
426 1j05_H T84.66 antibody, anti-C 98.9 7.8E-09 2.7E-13 63.9 8.4 68 1-68 20-100 (121)
427 2p1y_A Bispecific alpha/beta T 98.9 2.6E-09 8.8E-14 73.2 6.8 68 1-68 147-220 (238)
428 2bnu_A TCR alpha chain, T-cell 98.9 4.9E-09 1.7E-13 70.7 7.9 83 1-83 20-114 (203)
429 2edf_A Obscurin; beta-sandwich 98.9 5.9E-09 2E-13 62.4 7.5 76 83-163 14-96 (103)
430 1pew_A JTO2, A lambda-6 type i 98.9 2.8E-09 9.7E-14 64.7 6.1 68 1-68 20-93 (109)
431 3u6r_L Antibody 1:7 (light cha 98.9 2.6E-09 8.8E-14 68.2 6.1 80 1-82 20-106 (143)
432 2ifg_A High affinity nerve gro 98.9 2.3E-09 7.9E-14 77.7 6.6 74 1-83 266-346 (347)
433 2h32_A Immunoglobulin IOTA cha 98.9 1.5E-09 5.1E-14 67.8 4.9 68 1-68 20-100 (126)
434 1j05_L T84.66 antibody, anti-C 98.9 4.5E-09 1.5E-13 63.9 6.9 66 1-68 21-96 (111)
435 2edh_A Obscurin; structural ge 98.9 2.1E-08 7.2E-13 61.0 10.0 73 85-162 27-105 (113)
436 1mfa_H IGG1-lambda Se155-4 FAB 98.9 8E-09 2.7E-13 63.8 8.0 68 1-68 20-100 (120)
437 1kxv_C Camelid VHH domain CAB1 98.9 5.5E-09 1.9E-13 64.6 7.2 68 1-68 20-99 (121)
438 3b9v_A Heavy chain variable do 98.9 5.4E-09 1.9E-13 64.5 7.2 68 1-68 20-100 (120)
439 3so5_A LIG-3, leucine-rich rep 98.9 3.2E-09 1.1E-13 64.0 6.0 78 84-161 17-112 (112)
440 1dlf_L Anti-dansyl immunoglobu 98.9 9.5E-09 3.2E-13 62.7 8.2 66 1-68 21-97 (113)
441 3grw_A Fibroblast growth facto 98.9 1.4E-09 4.8E-14 74.4 4.9 82 1-84 134-220 (241)
442 2ens_A Advanced glycosylation 98.9 9.5E-10 3.2E-14 65.1 3.5 75 84-163 17-96 (96)
443 2oyp_A Hepatitis A virus cellu 98.9 7.7E-09 2.6E-13 62.3 7.6 38 126-163 71-109 (109)
444 2znx_A SCFV; fluorotryptohpan, 98.9 1.1E-08 3.7E-13 70.5 9.2 81 1-81 142-234 (242)
445 1n4x_H Immunoglobulin heavy ch 98.9 6.5E-09 2.2E-13 64.1 7.3 69 1-69 20-101 (120)
446 3qr2_A Basigin; CD147, EMMPRIN 98.9 3.8E-09 1.3E-13 66.6 6.3 67 1-68 41-111 (137)
447 1iam_A ICAM-1, CD54, intercell 98.9 2.7E-07 9.1E-12 61.3 15.4 103 46-150 49-166 (185)
448 1dlf_H Anti-dansyl immunoglobu 98.9 1.5E-08 5E-13 63.0 8.8 68 1-68 20-102 (124)
449 1z9m_A GAPA225; nectin-like, I 98.9 2.5E-08 8.5E-13 63.5 10.1 77 84-162 45-138 (145)
450 2frg_P TREM-like transcript-1; 98.9 5E-09 1.7E-13 63.4 6.5 80 1-81 17-104 (106)
451 3so5_A LIG-3, leucine-rich rep 98.9 6.8E-09 2.3E-13 62.6 7.1 76 1-80 30-111 (112)
452 3rrq_A Protein PD-1, programme 98.9 9E-09 3.1E-13 64.4 7.8 49 115-163 63-116 (129)
453 2d7t_H Anti polyhydroxybutyrat 98.9 7.8E-09 2.7E-13 65.6 7.5 83 1-83 20-117 (139)
454 1kxt_B Immunoglobulin VHH frag 98.9 8.8E-09 3E-13 64.3 7.7 68 1-68 20-99 (127)
455 1jtp_A Single-domain antibody; 98.9 2.1E-08 7E-13 64.3 9.6 68 1-68 20-100 (148)
456 2nw2_A ELS4 TCR alpha chain; T 98.9 1.1E-08 3.7E-13 68.9 8.6 83 1-83 19-111 (200)
457 2v9t_A Roundabout homolog 1; s 98.9 1.7E-09 5.9E-14 66.3 4.3 77 1-83 29-110 (117)
458 3mj6_A Junctional adhesion mol 98.9 3.7E-09 1.3E-13 73.5 6.5 85 1-85 138-240 (268)
459 1a2y_B IGG1-kappa D1.3 FV (hea 98.9 4.7E-09 1.6E-13 64.4 6.3 68 1-68 20-99 (116)
460 2v44_A NCAM2, neural cell adhe 98.9 5.6E-09 1.9E-13 68.9 7.1 56 1-68 116-172 (189)
461 1sjv_A R9; camelids antibody, 98.9 5.3E-09 1.8E-13 64.0 6.4 68 1-68 20-99 (114)
462 2jju_A Signal regulatory prote 98.9 4.8E-09 1.6E-13 65.5 6.3 66 1-68 23-95 (127)
463 2yz1_A Tyrosine-protein phosph 98.9 3.2E-09 1.1E-13 65.5 5.4 66 1-68 27-99 (120)
464 3ux9_B SCFV antibody; five hel 98.9 1.1E-08 3.9E-13 70.8 8.7 69 1-69 154-235 (256)
465 3umt_A SCFV heavy chain and li 98.9 4.9E-09 1.7E-13 72.7 6.8 82 1-84 158-247 (256)
466 2q86_A Valpha14 TCR; INKT cell 98.9 1.2E-08 4E-13 70.2 8.6 83 1-83 21-111 (229)
467 3bdb_A Novel immune-type recep 98.9 9.2E-09 3.1E-13 65.1 7.4 81 1-83 19-114 (137)
468 2otu_A FV light chain variable 98.9 1.1E-08 3.8E-13 62.6 7.6 66 1-68 21-97 (115)
469 1jhl_L IGG1-kappa D11.15 FV (l 98.9 1.3E-08 4.5E-13 61.5 7.8 80 80-161 4-107 (108)
470 4acp_A IG gamma-1 chain C regi 98.9 7.4E-09 2.5E-13 71.6 7.5 140 1-149 44-216 (240)
471 1x44_A Myosin-binding protein 98.9 6.8E-09 2.3E-13 62.2 6.4 75 84-163 14-97 (103)
472 3jz7_A MCAR, CAR, coxsackievir 98.9 2.4E-09 8.3E-14 71.7 4.9 70 1-83 141-213 (214)
473 1kgc_D T-cell receptor alpha c 98.9 1.6E-08 5.4E-13 68.4 8.9 81 1-82 19-112 (206)
474 1yc7_A Anti-VSG immunoglobulin 98.9 9.7E-09 3.3E-13 63.9 7.3 68 1-68 20-99 (124)
475 2xot_A Amphoterin-induced prot 98.9 4.3E-09 1.5E-13 76.8 6.5 84 1-101 266-351 (361)
476 2ny1_B T-cell surface glycopro 98.9 6.2E-09 2.1E-13 68.5 6.7 63 1-84 117-181 (184)
477 2oi9_C V beta, T cell receptor 98.9 2.4E-08 8.2E-13 61.8 9.0 68 1-69 21-96 (121)
478 3khq_A B-cell antigen receptor 98.9 1.1E-08 3.8E-13 64.4 7.4 77 84-162 24-117 (133)
479 3t0v_A Immunoglobulin variable 98.9 7.9E-09 2.7E-13 64.2 6.7 66 1-68 20-93 (123)
480 1he7_A High affinity nerve gro 98.8 3.8E-09 1.3E-13 65.8 5.0 70 93-162 16-99 (126)
481 2v5y_A Receptor-type tyrosine- 98.8 3.3E-07 1.1E-11 72.6 17.2 135 1-146 184-335 (731)
482 4ffy_L DENV1-E111 single chain 98.8 2.5E-08 8.6E-13 62.1 8.7 82 1-84 21-114 (126)
483 2yd1_A Tyrosine-protein phosph 98.8 7.6E-09 2.6E-13 69.6 6.8 70 1-84 130-202 (212)
484 1oaq_L Light chain; antibody, 98.8 7.9E-09 2.7E-13 63.8 6.3 81 1-83 20-111 (120)
485 3s97_C Contactin-1; carbonic a 98.8 7.1E-09 2.4E-13 68.8 6.5 66 1-81 133-200 (201)
486 2wzp_D Camelid VHH5; baseplate 98.8 6E-09 2E-13 64.6 5.8 68 1-68 20-100 (123)
487 2yuv_A Myosin-binding protein 98.8 1.9E-08 6.6E-13 59.8 7.8 71 87-162 18-95 (100)
488 3kg5_A B-cell antigen receptor 98.8 2.8E-08 9.4E-13 62.7 8.8 79 1-84 38-121 (134)
489 4ei6_A Valpha1 XV19 type II na 98.8 1.6E-08 5.3E-13 68.4 8.1 83 1-83 22-115 (208)
490 2k1m_A Myosin-binding protein 98.8 2.1E-08 7.1E-13 59.1 7.7 75 84-161 15-94 (95)
491 1mqk_H Antibody 7E2 FV fragmen 98.8 1.2E-08 4.1E-13 63.7 7.0 68 1-68 20-100 (127)
492 2yd6_A PTPRD protein; hydrolas 98.8 8.1E-09 2.8E-13 69.5 6.7 75 1-83 128-205 (212)
493 3k74_B Nanobody; immunoglobuli 98.8 2E-08 6.9E-13 61.5 7.9 68 1-68 18-98 (115)
494 2ghw_B Anti-SARS SCFV antibody 98.8 1.4E-08 4.7E-13 69.9 7.9 79 1-81 155-241 (247)
495 2edk_A Myosin-binding protein 98.8 5.8E-09 2E-13 62.2 5.3 76 83-163 14-100 (101)
496 3dmm_C T-cell surface glycopro 98.8 2.4E-08 8.3E-13 65.1 8.6 69 1-70 29-113 (166)
497 2qsq_A Carcinoembryonic antige 98.8 2.2E-08 7.5E-13 61.1 7.8 76 87-162 10-109 (111)
498 2pkd_A SLAM family member 5; s 98.8 1.9E-09 6.5E-14 65.9 2.9 76 1-82 19-110 (111)
499 3rgv_A YAE62 TCR A chain; TCR, 98.8 3.2E-08 1.1E-12 66.6 9.1 143 1-146 20-184 (200)
500 3shs_A HOC head outer capsid p 98.8 1.8E-07 6.3E-12 65.2 13.0 122 1-150 22-169 (304)
No 1
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=133.40 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=106.6
Q ss_pred CceEEec-CC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMG-LG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~-~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+ .| +.|.|+| ++.. +..+.|+.+..+...+..+|.|.+++.+|+|.|+|++.+ +.......+
T Consensus 22 l~c~~~~~~P~p~i~W~k--ng~~-------l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N-g~a~~~~~~ 91 (207)
T 3rbs_A 22 FWMQAEKLSGNAKVNYIF--NEKE-------IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD-GKATNHSTV 91 (207)
T ss_dssp EEEECSCCCSCCEEEEEE--TTEE-------ECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE-TTEEEEEEE
T ss_pred EEEEEecCCCCCEEEEEE--CCEE-------CccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC-CCeEEEEEE
Confidence 4688875 57 9999998 3332 234566666653334577899999999999999999965 444433333
Q ss_pred EEEc---------------------CC-----CceEeeCCCeEEEecC--CC-CceeEEEEeCCCeEEEecC--CCCceE
Q psy3125 79 NVDD---------------------RG-----RGARLSAGPLLNFAFP--DL-LTTNIYTYTGDARFSVIHP--QNSDEW 127 (163)
Q Consensus 79 ~V~~---------------------~~-----~~~~v~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~--~~~~~~ 127 (163)
.+.. ++ ....+..|..+.+.|. .. +.+.+.|++++..+..... ......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~ 171 (207)
T 3rbs_A 92 VLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGIC 171 (207)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEE
T ss_pred EEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEE
Confidence 2210 11 0135667888999996 33 5678999998775533221 123345
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
.|.|.+++.+|+|.|+|.| |..|..+..+.|.++
T Consensus 172 ~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 172 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp EEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred EEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 7999999999999999999 999999999988765
No 2
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.87 E-value=2.1e-21 Score=129.88 Aligned_cols=150 Identities=13% Similarity=0.275 Sum_probs=110.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+| +.. .+....++.+.. .....+|.|.+++.+|+|.|+|.+.+ .+.....+.|
T Consensus 27 l~C~~~~~p~~~v~W~~--~~~-------~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 95 (197)
T 3lcy_A 27 LSCQIVGRPLPDIKWYR--FGK-------ELIQSRKYKMSS--DGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKL 95 (197)
T ss_dssp EEEEEEEESCCEEEEEE--TTE-------EECCCSSEEEEE--SSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEEecCCCCEEEEEE--CCE-------ECCCCccEEEEe--CCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEE
Confidence 579999988 9999998 322 223456676665 34567899999999999999999953 4455566667
Q ss_pred EEEcCC---------CceEeeCCCeEEEecC--CCCceeEEEEeCCCeE------EEecCCCCceEEEEecccCc-CCCe
Q psy3125 79 NVDDRG---------RGARLSAGPLLNFAFP--DLLTTNIYTYTGDARF------SVIHPQNSDEWNMKIDYAQK-RDAG 140 (163)
Q Consensus 79 ~V~~~~---------~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i~~v~~-~D~G 140 (163)
.|..++ ....+..|..+.+.|. ..+.+.+.|++++..+ .+.. ......|.|.++.. +|+|
T Consensus 96 ~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G 173 (197)
T 3lcy_A 96 LLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIEN--TEHYTHLVMKNVQRKTHAG 173 (197)
T ss_dssp EEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE--CSSEEEEEESSCCHHHHCE
T ss_pred EEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEE--cCCEEEEEEccccchhhCc
Confidence 766431 2234567888899886 3345678898875432 2221 12346799999995 8999
Q ss_pred eEEEEc-CCCCCccEEEEEEEecC
Q psy3125 141 IYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 141 ~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
.|+|.| |..|..+..+.|.|.+|
T Consensus 174 ~Y~C~a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 174 KYKVQLSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECC
T ss_pred eEEEEEEcCcCceEEEEEEEEecC
Confidence 999999 99999999999999986
No 3
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=8.7e-21 Score=126.51 Aligned_cols=148 Identities=13% Similarity=0.255 Sum_probs=106.4
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....|+.+.. ++.+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 24 l~C~~~~~p~~~v~W~~--~~~~-------~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 90 (192)
T 2va4_A 24 FSCRASGSPEPAISWFR--NGKL-------IEENEKYILKG----SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 90 (192)
T ss_dssp EECEEECSSCCEEEEEE--TTEE-------CCCSSSEEEET----TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEeeccCCCCeEEEEE--CCeE-------cCCCccEEEeC----CeeEEEEecCChhcCcEEEEEEEccccccceEEEE
Confidence 679999999 9999998 3322 22345666553 34579999999999999999994 44445566667
Q ss_pred EEEcCC-----CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC-----------CCCceEEEEecccCcCCCe
Q psy3125 79 NVDDRG-----RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP-----------QNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 79 ~V~~~~-----~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~L~i~~v~~~D~G 140 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++....+... .......|.|.+++.+|+|
T Consensus 91 ~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 170 (192)
T 2va4_A 91 QVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSG 170 (192)
T ss_dssp EEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCE
T ss_pred EEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCE
Confidence 776543 22345568888999963 34557889887433332210 0112467999999999999
Q ss_pred eEEEEc-CCCCCccEEEEEEEe
Q psy3125 141 IYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 141 ~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
.|+|.| |..|..+..+.|.|+
T Consensus 171 ~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 171 RYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEEEecCCceEEEEEEEeC
Confidence 999999 999999999999985
No 4
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=1.2e-20 Score=127.68 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=107.0
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|.+.+.+ +.|.|+| ++.. +....|+.+... .+..+|.|.+++.+|+|.|+|.+.+ .+.....+.
T Consensus 22 l~C~~~~~~p~~~i~W~~--~g~~-------i~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~ 90 (212)
T 2r15_A 22 LYSFVTYYVEDLKVNWSH--NGSA-------IRYSDRVKTGVT--GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVD 90 (212)
T ss_dssp EEEEBSSCCSSCEEEEEE--TTEE-------CCCCSSEEEEEE--TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEeccCCCceEEEEE--CCEE-------ccCCCeEEEEEe--CCEEEEEECCCCcccCEEEEEEEecCCcceEEEEE
Confidence 578888854 9999998 3322 234467766652 3567899999999999999999954 333444444
Q ss_pred EEEEc---------------------------CCCceEeeCCCeEEEecC--CCCceeEEEEeCCCeEE------EecCC
Q psy3125 78 LNVDD---------------------------RGRGARLSAGPLLNFAFP--DLLTTNIYTYTGDARFS------VIHPQ 122 (163)
Q Consensus 78 l~V~~---------------------------~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~ 122 (163)
|.|.. .+....+..|..+.+.|. ..+.+.+.|++++..+. +...
T Consensus 91 l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~- 169 (212)
T 2r15_A 91 LSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFE- 169 (212)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEE-
T ss_pred EEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEc-
Confidence 54321 123456778888999996 34556789988765332 2211
Q ss_pred CCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 123 NSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 123 ~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
......|.|.+++.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 170 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 170 AGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp TTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 133568999999999999999999 9999999999999864
No 5
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.86 E-value=1.2e-20 Score=128.08 Aligned_cols=154 Identities=18% Similarity=0.326 Sum_probs=107.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCc-CCCeeEEEEeeC-CCC-eeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQK-RDAGIYECQVNT-EPK-MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~~~~-~~~-~~~~~ 76 (163)
|.|.+.+.| +.|.|+| ++..+. ...+|+.+... ..+..+|.|.+++. +|+|.|+|.+.+ .+. .+..+
T Consensus 26 l~C~~~g~p~~~v~W~~--~~~~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~ 96 (212)
T 2yd1_A 26 FYCAARGDPPPSIVWRK--NGKKVS------GTQSRYTVLEQ-PGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADA 96 (212)
T ss_dssp EEEEEECSSCCEEEEEE--TTEECC------TTSTTEEEEEE-TTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEE
T ss_pred EEEEEccCCCCeEEEEE--CCEECC------CCcceeEEEEc-CCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeE
Confidence 689999999 9999998 332221 24567776643 23457899999999 999999999954 444 56777
Q ss_pred EEEEEcCC-------------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC-CCceEEEEecccCcCCCe
Q psy3125 77 MLNVDDRG-------------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 77 ~l~V~~~~-------------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G 140 (163)
.|.|.... ....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|
T Consensus 97 ~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 176 (212)
T 2yd1_A 97 TLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQG 176 (212)
T ss_dssp EEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCE
T ss_pred EEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCChhhCE
Confidence 88887541 22345568888898863 445678898876533211000 001226999999999999
Q ss_pred eEEEEc-CCCCCccE-EEEEEEecC
Q psy3125 141 IYECQV-NTEPKMNM-AIMLNVDGK 163 (163)
Q Consensus 141 ~Y~C~a-~~~~~~~~-~~~L~V~~~ 163 (163)
.|+|.| |..|.... .+.|.|+++
T Consensus 177 ~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 177 KYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEEEeecCCCceeEEEEEEEEEec
Confidence 999999 88887765 489998763
No 6
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.86 E-value=7.2e-21 Score=128.71 Aligned_cols=162 Identities=17% Similarity=0.202 Sum_probs=112.9
Q ss_pred CceEEecCC-----CcEEEEEecCC------ee-EEecceEecC-----CCeEEEec-cCCCCeEEEEEcccCcCCCeeE
Q psy3125 1 MACTVMGLG-----RPVSWMRKRDL------HI-LTTNIYTYTG-----DARFSVIH-PQNSDEWNMKIDYAQKRDAGIY 62 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~~------~~-~~~~~~~~~~-----~~r~~~~~-~~~~~~~~L~i~~v~~~D~G~Y 62 (163)
|.|.+.+.+ +.|.|+|.+.. .+ ...++..... .+|+.+.. ....++.+|.|.+++.+|+|.|
T Consensus 20 L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 99 (214)
T 3jz7_A 20 LPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTY 99 (214)
T ss_dssp ECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSCCGGGCEEE
T ss_pred EEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccCChhhCeEE
Confidence 679998876 48999985321 22 2223333322 56777754 1123578899999999999999
Q ss_pred EEEee-CCCCeeEEEEEEEEcCCCce------EeeCCCeEEEecCC---CCceeEEEEeCCCeEEEe--cCCCCceEEEE
Q psy3125 63 ECQVN-TEPKMNMAIMLNVDDRGRGA------RLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVI--HPQNSDEWNMK 130 (163)
Q Consensus 63 ~C~~~-~~~~~~~~~~l~V~~~~~~~------~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~ 130 (163)
+|.+. ..+.....+.|.|..++... .+..|..+.+.|.. .+.+.+.|++.+....+. .........|.
T Consensus 100 ~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~ 179 (214)
T 3jz7_A 100 QCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVIS 179 (214)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGGTTSSEEE
T ss_pred EEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceeccCCCEEE
Confidence 99994 44456777888998775432 24567889999975 345678998854322221 11112234799
Q ss_pred ecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 131 IDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|.+++.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 180 i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 180 VKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred EecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 9999999999999999 9999999999998863
No 7
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.85 E-value=4.1e-20 Score=130.35 Aligned_cols=150 Identities=13% Similarity=0.168 Sum_probs=110.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....++.+... ....+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 119 l~C~~~g~p~~~v~W~~--~~~~-------~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 187 (284)
T 2rik_A 119 YECKIGGSPEIKVLWYK--DETE-------IQESSKFRMSFV--ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSL 187 (284)
T ss_dssp EEEEEESSSCCEEEEEE--TTEE-------CCCSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEEeeeCCCEEEEEE--CCEE-------CcCCCcEEEEEc--CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEE
Confidence 579999999 9999998 3222 223345544431 347789999999999999999994 45566777888
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC----CCCceEEEEecccCcCCCeeEEEEc
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|.|+|.|
T Consensus 188 ~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 267 (284)
T 2rik_A 188 KVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKA 267 (284)
T ss_dssp EEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 888763 23456678889999964 34567889887654321110 1123467999999999999999999
Q ss_pred -CCCCCccEEEEEEEe
Q psy3125 147 -NTEPKMNMAIMLNVD 161 (163)
Q Consensus 147 -~~~~~~~~~~~L~V~ 161 (163)
|..|..+..+.|.|+
T Consensus 268 ~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 268 SNDVGSYTCVGSITLK 283 (284)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EeCCCceeEEEEEEEc
Confidence 999999999999986
No 8
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.85 E-value=2e-20 Score=124.44 Aligned_cols=154 Identities=15% Similarity=0.227 Sum_probs=108.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEe-c----CCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEeeCCCCee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTY-T----GDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVNTEPKMN 73 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~-~----~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 73 (163)
|.|.+.+.+ +.|.|+|.+...++....... . ..+|+.+.... ..+..+|.|.+++.+|+|.|+|.+.+. .
T Consensus 15 L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~---~ 91 (184)
T 2ny1_B 15 LTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQ---K 91 (184)
T ss_dssp ECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEEETTE---E
T ss_pred EEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEEEEcC---C
Confidence 679999888 999999844332332111111 1 13455544310 123567999999999999999999543 1
Q ss_pred EEEEEEEEc--CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 74 MAIMLNVDD--RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 74 ~~~~l~V~~--~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
..+.|.|.. .++...+..|..+.+.|.. .+.+.+.|+.++...... ...|.|.+++.+|+|.|+|.| |.
T Consensus 92 ~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~ 165 (184)
T 2ny1_B 92 EEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQG------GKTLSVSQLELQDSGTWTCTVLQN 165 (184)
T ss_dssp EEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEEE------SSEEEESSCCGGGCEEEEEEEEET
T ss_pred CcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccccC------ceEEEEecCCcCCCeEEEEEEEEC
Confidence 244455542 2344567889999999964 456788999887766422 345999999999999999999 88
Q ss_pred CCCccEEEEEEEecC
Q psy3125 149 EPKMNMAIMLNVDGK 163 (163)
Q Consensus 149 ~~~~~~~~~L~V~~~ 163 (163)
.+..+..+.|.|.+.
T Consensus 166 ~~~~~~~~~l~V~~~ 180 (184)
T 2ny1_B 166 QKKVEFKIDIVVLAF 180 (184)
T ss_dssp TEEEEEEEEEEEECC
T ss_pred CceEEEEEEEEEEec
Confidence 889999999999873
No 9
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.85 E-value=1.5e-20 Score=126.06 Aligned_cols=152 Identities=15% Similarity=0.195 Sum_probs=109.4
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ....++.+... ..+..+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 24 l~C~~~~~p~~~v~W~~--~~~~~~------~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 94 (197)
T 2j8h_A 24 LVCKVTGHPKPIVKWYR--QGKEII------ADGLKYRIQEF-KGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASL 94 (197)
T ss_dssp EEEEEECSSCCEEEEEE--TTEECC------CCSSSEEEEEE-TTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeecCCCEEEEEE--CCEECc------cCCCcEEEEEc-CCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEE
Confidence 689999998 9999998 332221 12356665542 2346789999999999999999994 44455667777
Q ss_pred EEEcCC-----------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC----CCCceEEEEecc-cCcCCCe
Q psy3125 79 NVDDRG-----------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP----QNSDEWNMKIDY-AQKRDAG 140 (163)
Q Consensus 79 ~V~~~~-----------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~i~~-v~~~D~G 140 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+ ++.+|+|
T Consensus 95 ~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G 174 (197)
T 2j8h_A 95 EVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAG 174 (197)
T ss_dssp EEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCE
T ss_pred EEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCE
Confidence 776532 12345668888888863 34568899987764431110 112356799999 9999999
Q ss_pred eEEEEc-CCCCCccEEEEEEEe
Q psy3125 141 IYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 141 ~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
.|+|.| |..|..+..+.|.|.
T Consensus 175 ~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 175 FYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEEEeCCCcEeEEEEEEEe
Confidence 999999 999999999999986
No 10
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.85 E-value=1.9e-19 Score=120.19 Aligned_cols=143 Identities=17% Similarity=0.271 Sum_probs=103.9
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEE
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~ 77 (163)
|.|.+.+.+ +.|.|+| ++..+ ....++ ..+.+|.|.+++.+|+|.|+|.+.+.+..+..+.
T Consensus 23 l~C~~~~~~~~~~~v~W~~--~~~~~-------~~~~~~-------~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 86 (190)
T 2wv3_A 23 LQCNLTSSSHTLMYSYWTK--NGVEL-------TATRKN-------ASNMEYRINKPRAEDSGEYHCVYHFVSAPKANAT 86 (190)
T ss_dssp EEEEEEECSSCEEEEEEEE--TTEEC-------TTCCBC-------CSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEEEeccCCCCceEEEEEE--CCEEC-------cccceE-------eccEEEEEecCCcccCEEEEEEEEeCCcccccEE
Confidence 679999876 6899998 33222 111111 1367899999999999999999955466677788
Q ss_pred EEEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeC--CC---------eEEEecCCCCceEEEEecccC-cC
Q psy3125 78 LNVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTG--DA---------RFSVIHPQNSDEWNMKIDYAQ-KR 137 (163)
Q Consensus 78 l~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~--~~---------~~~~~~~~~~~~~~L~i~~v~-~~ 137 (163)
|.|..++ ....+..|..+.+.|.. .+.+.+.|++. +. ++.+.. ......|.|.+++ .+
T Consensus 87 l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~~ 164 (190)
T 2wv3_A 87 IEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIIN--KENYTELNIVNLQITE 164 (190)
T ss_dssp EEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEE--CSSEEEEEECSCCTTT
T ss_pred EEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEec--CCCeeEEEEEeccccC
Confidence 8888764 23356678889999963 45568889883 32 222221 1223579999999 79
Q ss_pred CCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 138 DAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 138 D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
|+|.|+|.| |..|..+..+.|.|+
T Consensus 165 d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 165 DPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999999 999999999999986
No 11
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.85 E-value=3.1e-20 Score=130.07 Aligned_cols=162 Identities=20% Similarity=0.293 Sum_probs=109.7
Q ss_pred CceEEe---cCC-CcEEEEEecCCe-----eEEecceEec----CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVM---GLG-RPVSWMRKRDLH-----ILTTNIYTYT----GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~---~~~-~~v~W~k~~~~~-----~~~~~~~~~~----~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+. +.+ +.|.|+|.+... ++........ ..+|+.+.......+.+|.|.+++.+|+|.|+|.+.
T Consensus 25 L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 104 (268)
T 3mj6_A 25 MGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIR 104 (268)
T ss_dssp ECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHCEEEEEEEE
Confidence 679988 666 889999954311 1111111101 135777654434567889999999999999999995
Q ss_pred CC-C--CeeEEEEEEEEcC-CCceEeeCCCeEEEecCC---C--CceeEEEEeCCC------------------------
Q psy3125 68 TE-P--KMNMAIMLNVDDR-GRGARLSAGPLLNFAFPD---L--LTTNIYTYTGDA------------------------ 114 (163)
Q Consensus 68 ~~-~--~~~~~~~l~V~~~-~~~~~v~~~~~~~~~~~~---~--~~~~~~~~~~~~------------------------ 114 (163)
+. . .....+.|.|... +....+..|..+.+.|.. . +.+.+.|++.+.
T Consensus 105 ~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (268)
T 3mj6_A 105 LKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLG 184 (268)
T ss_dssp ETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSS
T ss_pred ecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCcccccccc
Confidence 32 2 2345666777643 445678889999999976 2 456889987422
Q ss_pred ----eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 115 ----RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 115 ----~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
++.+..........|.|.+++.+|+|.|+|.| |..+..+..+.|.|..
T Consensus 185 ~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 185 RFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp TTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 11111111123457999999999999999999 8888888999998843
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.85 E-value=7.7e-20 Score=128.98 Aligned_cols=151 Identities=15% Similarity=0.241 Sum_probs=110.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....++.+... .+..+|.|.+++.+|+|.|+|.+. ..+..+..+.|
T Consensus 25 l~C~~~g~p~~~v~W~~--~~~~-------~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l 93 (284)
T 2rik_A 25 FKCHVTGTAPIKITWAK--DNRE-------IRPGGNYKMTLV--ENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQL 93 (284)
T ss_dssp EEEEEESSSCCEEEEEE--TTEE-------CCSSSSEEEEEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEE--CCEE-------CcCCCcEEEEEc--CCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEE
Confidence 689999998 9999998 3222 233456655432 357889999999999999999994 44556677788
Q ss_pred EEEcCCC-------ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC----CCCceEEEEecccCcCCCeeEEEE
Q psy3125 79 NVDDRGR-------GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 79 ~V~~~~~-------~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
.|..++. ...+..|..+.+.|.. .+...+.|++++..+..... .......|.|.+++.+|+|.|+|.
T Consensus 94 ~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 173 (284)
T 2rik_A 94 GVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCE 173 (284)
T ss_dssp EEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred EccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEE
Confidence 8876642 2346678888999963 45668899987653321110 112356799999999999999999
Q ss_pred c-CCCCCccEEEEEEEec
Q psy3125 146 V-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 146 a-~~~~~~~~~~~L~V~~ 162 (163)
| |..+..+..+.|.|..
T Consensus 174 a~n~~g~~~~~~~l~V~~ 191 (284)
T 2rik_A 174 AHNAAGSASSSTSLKVKE 191 (284)
T ss_dssp EECSSCEEEEEEEEEEEC
T ss_pred EEcCCCceeEEEEEEEec
Confidence 9 8888888899998864
No 13
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.85 E-value=2.9e-20 Score=143.21 Aligned_cols=150 Identities=15% Similarity=0.224 Sum_probs=112.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.|.| +.|.|+| ++.. +..+.++.+... ....+|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 404 l~C~~~g~P~p~v~W~k--~g~~-------l~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 472 (570)
T 3b43_A 404 LECELQGTPPFQVSWHK--DKRE-------LRSGKKYKIMSE--NFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSI 472 (570)
T ss_dssp EEEEEESSSSCCCEEEE--TTEE-------CCSSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEEecCCCCEEEEEE--CCEE-------CcCCCCEEEEEc--CCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 689999999 9999998 3322 234557776642 34568999999999999999999 445666677778
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEec-----CCCCceEEEEecccCcCCCeeEEEE
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIH-----PQNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++....... ........|.|.+++.+|+|.|+|.
T Consensus 473 ~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 552 (570)
T 3b43_A 473 TLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQ 552 (570)
T ss_dssp EECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEE
T ss_pred EeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEE
Confidence 887664 22345567888888863 4567889998764321110 1123457899999999999999999
Q ss_pred c-CCCCCccEEEEEEEe
Q psy3125 146 V-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 146 a-~~~~~~~~~~~L~V~ 161 (163)
| |..|..+..+.|.|.
T Consensus 553 a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 553 IKNEAGTQECFATLSVL 569 (570)
T ss_dssp EECSSCEEEEEEEECCB
T ss_pred EEECCcEEEEEEEEEEe
Confidence 9 999999999999885
No 14
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.85 E-value=1.7e-20 Score=127.22 Aligned_cols=152 Identities=11% Similarity=0.025 Sum_probs=98.2
Q ss_pred CceE---EecCC-CcEEEEEecCCeeE----Eecce-Ee---cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-
Q psy3125 1 MACT---VMGLG-RPVSWMRKRDLHIL----TTNIY-TY---TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN- 67 (163)
Q Consensus 1 l~C~---~~~~~-~~v~W~k~~~~~~~----~~~~~-~~---~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~- 67 (163)
|+|. +.+.| +.|.|+|....... ..... .. ...+++.+.. ..+.++|.|.+++.+|+|.|+|++.
T Consensus 13 L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n 90 (203)
T 4fa8_A 13 LTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHR--SANTFFLVVTAANISHDGNYLCRMKL 90 (203)
T ss_dssp EEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEE--cCCEEEEEEccCCHHHCeEEEEEEEc
Confidence 6784 56777 99999985332111 11111 11 1234555544 3468899999999999999999994
Q ss_pred CCCCeeEEEEEEEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEe--------cCCCCceEEEEe
Q psy3125 68 TEPKMNMAIMLNVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVI--------HPQNSDEWNMKI 131 (163)
Q Consensus 68 ~~~~~~~~~~l~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~L~i 131 (163)
..+.....+.|.|..++ ....+..|..+.+.|.. .+.+.+.|+++++..... ...++.-..|.|
T Consensus 91 ~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i 170 (203)
T 4fa8_A 91 GETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVD 170 (203)
T ss_dssp TTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEE
T ss_pred CCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEE
Confidence 45566677788887653 22235567888999963 456788998765433211 112223344677
Q ss_pred cccCcCCCeeEEEEc-CCCCCccE
Q psy3125 132 DYAQKRDAGIYECQV-NTEPKMNM 154 (163)
Q Consensus 132 ~~v~~~D~G~Y~C~a-~~~~~~~~ 154 (163)
.+++.+|+|.|+|.| |..|.+..
T Consensus 171 ~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 171 LSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp EEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCCHHHCEEEEEEEEcCCCEEEE
Confidence 899999999999999 88887765
No 15
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.85 E-value=1.5e-20 Score=125.58 Aligned_cols=150 Identities=17% Similarity=0.268 Sum_probs=105.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+... ..+++.+.. ..+..+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 25 l~C~~~~~p~~~v~W~~--~~~~~~~~-----~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 95 (194)
T 2a38_A 25 FEAHISGFPVPEVSWFR--DGQVISTS-----TLPGVQISF--SDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAEL 95 (194)
T ss_dssp EEEEEEEESCCEEEEEE--SSSBCCTT-----TSTTCEEEE--ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCEEEEEE--CCEEcccc-----cCCceEEEe--CCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEE
Confidence 679999988 9999998 32222111 123444443 2347789999999999999999994 44445556667
Q ss_pred EEEcC---------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeE------EEecCCCCceEEEEecccCcCCCee
Q psy3125 79 NVDDR---------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARF------SVIHPQNSDEWNMKIDYAQKRDAGI 141 (163)
Q Consensus 79 ~V~~~---------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i~~v~~~D~G~ 141 (163)
.|... +....+..|..+.+.|.. .+.+.+.|++++..+ .+.. ......|.|.+++.+|+|.
T Consensus 96 ~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~ 173 (194)
T 2a38_A 96 LVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQ--EGDLYSLLIAEAYPEDSGT 173 (194)
T ss_dssp EEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE--ETTEEEEEEEEECGGGCEE
T ss_pred EEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEE--cCCEEEEEECCCChhcCeE
Confidence 77632 233456678888899863 344568898876532 2221 1234579999999999999
Q ss_pred EEEEc-CCCCCccEEEEEEEe
Q psy3125 142 YECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 142 Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
|+|.| |..|..+..+.|.|+
T Consensus 174 Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 174 YSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEEEEEC
Confidence 99999 988999999999885
No 16
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.85 E-value=6.7e-21 Score=140.24 Aligned_cols=148 Identities=18% Similarity=0.215 Sum_probs=106.2
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+|.+...+. ...+ .. ..+.+|.|.+++.+|+|.|+|.+ |..+.......|
T Consensus 225 l~C~~~g~P~p~i~W~k~~~~~~~--------~~~~--~~----~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 290 (384)
T 3kld_A 225 LECFALGNPVPTILWRRADGKPIA--------RKAR--RH----KSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290 (384)
T ss_dssp EEEEEEEESCCEEEEEETTCCCCC--------TTCE--EC----TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeecCCCcEEEEeCCCcccc--------ccce--ec----CCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 679999999 99999984332211 1111 11 12457999999999999999999 555566666677
Q ss_pred EEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..+ +....+..|..+.+.|.. .+.+.+.|++++..+............|.|.++..+|+|.|+|.| |..
T Consensus 291 ~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~ 370 (384)
T 3kld_A 291 TFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKH 370 (384)
T ss_dssp EEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCC
Confidence 77654 234567778889999964 455788999887543211110011236999999999999999999 999
Q ss_pred CCccEEEEEEEec
Q psy3125 150 PKMNMAIMLNVDG 162 (163)
Q Consensus 150 ~~~~~~~~L~V~~ 162 (163)
|....++.|.|..
T Consensus 371 G~~~~~a~L~V~~ 383 (384)
T 3kld_A 371 GVIFSSAELSVIA 383 (384)
T ss_dssp EEEEEEEEEEEC-
T ss_pred ceEEeceEEEEec
Confidence 9999999999975
No 17
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=7.3e-20 Score=123.68 Aligned_cols=156 Identities=15% Similarity=0.178 Sum_probs=108.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeE--EecceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CC--Cee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHIL--TTNIYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EP--KMN 73 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~--~~~~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~--~~~ 73 (163)
|.|.+.+.| +.|.|+|.+..... ...... .....|+.+.. .+|.|.+++.+|+|.|+|.+.+ .+ ..+
T Consensus 21 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~ 94 (212)
T 1f97_A 21 LTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS------SGITFSSVTRKDNGEYTCMVSEEGGQNYGE 94 (212)
T ss_dssp EECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET------TEEEESCCCGGGCEEEEEEEEETTSSSEEE
T ss_pred EEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec------eeEEEcccCcccCeEEEEEEEccCCCcccE
Confidence 689999988 99999985443211 111111 12345666553 5799999999999999999954 22 446
Q ss_pred EEEEEEEEcCCCce------EeeCCCeEEEecC-C--CCceeEEEEeCCC-eEEEecC-----------CCCceEEEEec
Q psy3125 74 MAIMLNVDDRGRGA------RLSAGPLLNFAFP-D--LLTTNIYTYTGDA-RFSVIHP-----------QNSDEWNMKID 132 (163)
Q Consensus 74 ~~~~l~V~~~~~~~------~v~~~~~~~~~~~-~--~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~L~i~ 132 (163)
..+.|.|..++... .+..|..+.+.|. . .+.+.+.|++++. .+..... .......|.|.
T Consensus 95 ~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~ 174 (212)
T 1f97_A 95 VSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFD 174 (212)
T ss_dssp EEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEES
T ss_pred EEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEE
Confidence 77788888775332 4567888999997 2 3456788998876 4432211 01224569999
Q ss_pred ccCcCCCeeEEEEc-CCCCCc--cEEEEEEEec
Q psy3125 133 YAQKRDAGIYECQV-NTEPKM--NMAIMLNVDG 162 (163)
Q Consensus 133 ~v~~~D~G~Y~C~a-~~~~~~--~~~~~L~V~~ 162 (163)
+++.+|+|.|+|.| |..|.. +..+.|.|.+
T Consensus 175 ~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 175 PVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp SCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred ecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 99999999999999 888877 7778888764
No 18
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.84 E-value=1.2e-20 Score=125.13 Aligned_cols=148 Identities=14% Similarity=0.206 Sum_probs=101.9
Q ss_pred CceEEec--CC-CcEEEEEecCCeeEEe--cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCe--
Q psy3125 1 MACTVMG--LG-RPVSWMRKRDLHILTT--NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKM-- 72 (163)
Q Consensus 1 l~C~~~~--~~-~~v~W~k~~~~~~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~-- 72 (163)
|.|.... .+ +.|.|+|. +..+..+ +......++|+.+.. +.+|.|.+++.+|+|.|+|++. ..+..
T Consensus 16 L~c~~~~~~~~~~~i~W~k~-~~~i~~~~~~~~~~~~~~r~~~~~-----~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~ 89 (176)
T 1hng_A 16 LNIPNFQMTDDIDEVRWERG-STLVAEFKRKMKPFLKSGAFEILA-----NGDLKIKNLTRDDSGTYNVTVYSTNGTRIL 89 (176)
T ss_dssp ECCTTCCCCTTEEEEEEEET-TEEEEEEETTSCCEESSTTEEECT-----TSCEEESSCCGGGCEEEEEEEEETTCCEEE
T ss_pred EcCCCCCcccccccEEEEeC-CceeEEEcCCCeecCCCCeEEECC-----CCcEEEcccccccCEEEEEEEEeCCCCEEE
Confidence 4673322 44 78999983 2222211 122234567888753 3349999999999999999994 44443
Q ss_pred eEEEEEEEEcCCCceEeeC-CCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 73 NMAIMLNVDDRGRGARLSA-GPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 73 ~~~~~l~V~~~~~~~~v~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
...+.|.|..+...+.+.. +..+.+.|.. .+.+.+.|++++..+..... +.|..++.+|+|.|+|.| |.
T Consensus 90 ~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-------~~i~~~~~~d~G~Y~C~a~N~ 162 (176)
T 1hng_A 90 NKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-------KTMSYQWTNLRAPFKCKAVNR 162 (176)
T ss_dssp EEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-------SEEEEECSCCSSCEEEEEEET
T ss_pred EEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-------EEEEEEEccCCeEEEEEEEec
Confidence 6677888887654444433 3357888853 44578899998876654331 567788999999999999 98
Q ss_pred CCCccEEEEEEEe
Q psy3125 149 EPKMNMAIMLNVD 161 (163)
Q Consensus 149 ~~~~~~~~~L~V~ 161 (163)
.|..+..+.|.|.
T Consensus 163 ~g~~~~~~~l~~~ 175 (176)
T 1hng_A 163 VSQESEMEVVNCP 175 (176)
T ss_dssp TEEEEEEECCCCC
T ss_pred CCCceecccccCC
Confidence 8988888877664
No 19
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.84 E-value=1.1e-19 Score=123.57 Aligned_cols=152 Identities=18% Similarity=0.272 Sum_probs=103.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEccc-CcCCCeeEEEEee-CCCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYA-QKRDAGIYECQVN-TEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v-~~~D~G~Y~C~~~-~~~~~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+. ..++...........+|.|.++ +.+|+|.|+|.+. ..+.....+.
T Consensus 26 L~C~~~g~p~~~v~W~k--~~~~~~--------~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~ 95 (212)
T 2yd6_A 26 FICQATGDPRPKIVWNK--KGKKVS--------NQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTR 95 (212)
T ss_dssp EEEEEEEESCCEEEEEE--TTEECC--------CTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeeCCCCEEEEEE--CCcCCC--------CCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEE
Confidence 679999999 9999998 332221 2333333222234678999999 5999999999994 4445566777
Q ss_pred EEEEcC-------------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC-------CCCceEEEEecccC
Q psy3125 78 LNVDDR-------------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP-------QNSDEWNMKIDYAQ 135 (163)
Q Consensus 78 l~V~~~-------------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~~L~i~~v~ 135 (163)
|.|... +....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++
T Consensus 96 l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~ 175 (212)
T 2yd6_A 96 LTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSE 175 (212)
T ss_dssp EEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCC
T ss_pred EEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCC
Confidence 888643 223356668888898863 45567899988654332110 01235779999999
Q ss_pred cCCCeeEEEEc-CCCCCc-cEEEEEEEec
Q psy3125 136 KRDAGIYECQV-NTEPKM-NMAIMLNVDG 162 (163)
Q Consensus 136 ~~D~G~Y~C~a-~~~~~~-~~~~~L~V~~ 162 (163)
.+|+|.|+|.| |..|.. +..+.|.|..
T Consensus 176 ~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 176 ESDQGKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred cccCEEEEEEEECCCCccccccccEEEEe
Confidence 99999999999 887755 4567777653
No 20
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.84 E-value=2.1e-19 Score=119.78 Aligned_cols=150 Identities=19% Similarity=0.250 Sum_probs=102.6
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CCe-eEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PKM-NMAIML 78 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~~-~~~~~l 78 (163)
|.|.+.+.|..|.|+|.++..+ ....|+.+... ....+|.|.+++.+|+|.|+|.+.+. +.. +..+.|
T Consensus 22 L~C~~~~~p~~v~W~~~~~~~~--------~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l 91 (189)
T 2v44_A 22 FTCTAIGEPESIDWYNPQGEKI--------ISTQRVVVQKE--GVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 91 (189)
T ss_dssp EEEEEEECCSEEEEECTTSCBC--------CCCSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeecCCeeEEEEeCCCCcc--------CCCceEEEECC--CCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEE
Confidence 6799999888899998433322 23557766652 34678999999999999999999543 333 567777
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC---CCceEEEEecccCcCCCeeEEEEc-
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.|+|.|
T Consensus 92 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 171 (189)
T 2v44_A 92 EIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGR 171 (189)
T ss_dssp EEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEE
T ss_pred EEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEE
Confidence 777653 33456788889999963 445678998877644321100 011235999999999999999999
Q ss_pred CCCCCccEEEEEEE
Q psy3125 147 NTEPKMNMAIMLNV 160 (163)
Q Consensus 147 ~~~~~~~~~~~L~V 160 (163)
|..+.......+.|
T Consensus 172 n~~~~~~~~~~~~v 185 (189)
T 2v44_A 172 VEARGEIDFRDIIV 185 (189)
T ss_dssp ETTTTEEEEEEEEE
T ss_pred ccccCceeeeeEEE
Confidence 77765554444433
No 21
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.84 E-value=2.6e-19 Score=137.93 Aligned_cols=149 Identities=13% Similarity=0.209 Sum_probs=111.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.|.| +.|.|+| ++..+ ....++.+... .....|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 311 l~C~~~g~P~p~v~W~k--~~~~l-------~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 379 (570)
T 3b43_A 311 YECKIGGSPEIKVLWYK--DETEI-------QESSKFRMSFV--ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSL 379 (570)
T ss_dssp EEEEEESSSSCEEEEEE--TTEEC-------CCSSSEEEEEE--TTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEE
T ss_pred EEEEEeeCCCCEEEEeE--CCEEC-------CCCCcEEEEEE--CCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEE
Confidence 579999999 9999998 33222 23445555432 24678999999999999999999 556667778889
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCe------EEEecCCCCceEEEEecccCcCCCeeEEE
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR------FSVIHPQNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++.. +.+.. ......|.|.+++.+|+|.|+|
T Consensus 380 ~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C 457 (570)
T 3b43_A 380 KVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMS--ENFLTSIHILNVDSADIGEYQC 457 (570)
T ss_dssp CEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEE--ETTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEE--cCCEEEEEECCCChhhCEEEEE
Confidence 888663 33456678889999963 45678899987643 22221 1224579999999999999999
Q ss_pred Ec-CCCCCccEEEEEEEec
Q psy3125 145 QV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~ 162 (163)
.| |..|..+..+.|.|..
T Consensus 458 ~A~N~~G~~~~~~~l~v~~ 476 (570)
T 3b43_A 458 KASNDVGSDTCVGSITLKA 476 (570)
T ss_dssp EEECSSCEEEEEEEEEECC
T ss_pred EEEECCCeEEEEEEEEecc
Confidence 99 9999999888888864
No 22
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=1.3e-19 Score=120.01 Aligned_cols=147 Identities=12% Similarity=0.281 Sum_probs=102.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-C-CeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-P-KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~-~~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+. ...++.+.........+|.|.+++.+|+|.|+|.+.+. + ..+..+.
T Consensus 22 l~C~~~~~p~~~v~W~k--~~~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 92 (182)
T 1rhf_A 22 LNCSVEGMEEPDIQWVK--DGAVVQ-------NLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVW 92 (182)
T ss_dssp EEEEEESCSSCCEEEEE--TTEECC-------SSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEE
T ss_pred EEEEEeCCCCCeEEEEE--CCeecC-------CCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEE
Confidence 679999988 9999998 333222 22344333322222578999999999999999999553 2 2446677
Q ss_pred EEEEcCC------CceEeeCCCeEEEecCC--CCce-eEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 78 LNVDDRG------RGARLSAGPLLNFAFPD--LLTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 78 l~V~~~~------~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|.|..++ ....+..|..+.+.|.. .+.+ .+.|++++..+.. .......|.|.++ +|+|.|+|.| |
T Consensus 93 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~---~~~~~~~L~i~~~--~d~G~Y~C~a~N 167 (182)
T 1rhf_A 93 LTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGG---PAPSPSVLNVTGV--TQSTMFSCEAHN 167 (182)
T ss_dssp EEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSC---SEESSEEEEECCC--SSCEEEEEEEEE
T ss_pred EEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCC---CCCCceEEEEecc--ccCeEEEEEEEC
Confidence 8877553 33456778888999963 3445 7889987764321 1124667999998 5999999999 8
Q ss_pred CCCCc-cEEEEEEEe
Q psy3125 148 TEPKM-NMAIMLNVD 161 (163)
Q Consensus 148 ~~~~~-~~~~~L~V~ 161 (163)
..|.. +..+.|.|+
T Consensus 168 ~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 168 LKGLASSRTATVHLQ 182 (182)
T ss_dssp TTEEEECCCEEEEEC
T ss_pred CCCCcccceEEEEeC
Confidence 87776 458888875
No 23
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.83 E-value=6.7e-19 Score=135.59 Aligned_cols=163 Identities=13% Similarity=0.202 Sum_probs=114.9
Q ss_pred CceEEecCC-CcE----EEEEe-cCC--eeEEecc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC
Q psy3125 1 MACTVMGLG-RPV----SWMRK-RDL--HILTTNI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK 71 (163)
Q Consensus 1 l~C~~~~~~-~~v----~W~k~-~~~--~~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 71 (163)
|.|.+.+.| +.+ .|+|. ++. .+..... ......+|+.+......+.++|.|.+++.+|+|.|+|.++..+.
T Consensus 351 l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~an~~g~ 430 (585)
T 2ocw_A 351 VLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTL 430 (585)
T ss_pred EEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcccCCCc
Confidence 689999999 776 78873 333 3333222 22334678887754334567799999999999999999966666
Q ss_pred eeEEEEEEEEcCC------CceEeeCCCeEEEecCC------CCceeEEEEeCCCeEEEec-----------CCCCceEE
Q psy3125 72 MNMAIMLNVDDRG------RGARLSAGPLLNFAFPD------LLTTNIYTYTGDARFSVIH-----------PQNSDEWN 128 (163)
Q Consensus 72 ~~~~~~l~V~~~~------~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 128 (163)
....+.|.|...+ ....+..|..+.+.|.. .+.+.+.|++++..+.... ........
T Consensus 431 ~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (585)
T 2ocw_A 431 WRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVS 510 (585)
T ss_pred cceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEE
Confidence 6777888887642 33456778889999954 2445778998876543221 11233468
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCcc-EEEEEEEecC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMN-MAIMLNVDGK 163 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~-~~~~L~V~~~ 163 (163)
|.|.+++.+|+|.|+|.| |..|... ..+.|.|.++
T Consensus 511 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~ 547 (585)
T 2ocw_A 511 LTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEER 547 (585)
T ss_pred EEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEee
Confidence 999999999999999999 8777554 4489998763
No 24
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.83 E-value=2e-19 Score=122.96 Aligned_cols=153 Identities=20% Similarity=0.319 Sum_probs=105.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+.... ....+.... ...+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 39 L~C~~~~~p~~~v~W~~--~~~~~~~~~----~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 108 (231)
T 3ojm_B 39 FRCPAGGNPMPTMRWLK--NGKEFKQEH----RIGGYKVRN----QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHL 108 (231)
T ss_dssp EECCEEEESCCEEEEEE--TTEECCGGG----STTCCEEEG----GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEecccCCCCeEEEEE--CCccccccc----cccceeeec----CcceEEEecCCcccCEEEEEEEecccCcccccEEE
Confidence 579999998 8999998 333221110 011112221 35679999999999999999994 44555667778
Q ss_pred EEEcCC-----------CceEeeCCCeEEEecC--CCCceeEEEEe----CCCeE--------EEe---cCCCCceEEEE
Q psy3125 79 NVDDRG-----------RGARLSAGPLLNFAFP--DLLTTNIYTYT----GDARF--------SVI---HPQNSDEWNMK 130 (163)
Q Consensus 79 ~V~~~~-----------~~~~v~~~~~~~~~~~--~~~~~~~~~~~----~~~~~--------~~~---~~~~~~~~~L~ 130 (163)
.|...+ ....+..|..+.+.|. ..+.+.+.|++ ++..+ ... .........|.
T Consensus 109 ~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 188 (231)
T 3ojm_B 109 DVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLA 188 (231)
T ss_dssp EEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEE
T ss_pred EEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEE
Confidence 887532 2345667888999996 34556888987 33321 111 11122345699
Q ss_pred ecccCcCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 131 IDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
|.+++.+|+|.|+|.| |..|..+..+.|.|..+
T Consensus 189 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 189 LFNVTEADAGEYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EecCCHHHCeEEEEEEEeccceEeeEEEEEEecC
Confidence 9999999999999999 88899999999999764
No 25
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.83 E-value=3.6e-19 Score=123.68 Aligned_cols=145 Identities=14% Similarity=0.222 Sum_probs=95.6
Q ss_pred CceEEecCC-CcEEEEEecCC---eeE-EecceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC--e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HIL-TTNIYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK--M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~-~~~~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~--~ 72 (163)
|.|.+.+.+ +.|.|+|.+.. ..+ ...... ....+||.+.. ..+.++|.|.+++.+|+|.|+|++.+... .
T Consensus 24 L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~ 101 (250)
T 3esu_F 24 ISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG--SGTDYSLTISNLEQEDIGTYFCQQGNTLPWTF 101 (250)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC--CCCEEEEEEccCChhhCEEEEEEEeeCCCceE
Confidence 689999999 99999995422 111 111111 12356887654 34678999999999999999999954321 2
Q ss_pred eEEEEEEEEcC-------------------------CCceEeeCCCeEEEecCCC--C--ceeEEEEeC--CC-------
Q psy3125 73 NMAIMLNVDDR-------------------------GRGARLSAGPLLNFAFPDL--L--TTNIYTYTG--DA------- 114 (163)
Q Consensus 73 ~~~~~l~V~~~-------------------------~~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~--~~------- 114 (163)
.....|.|..+ +....+..|..+.+.|... + ...+.|++. +.
T Consensus 102 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~ 181 (250)
T 3esu_F 102 GGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGR 181 (250)
T ss_dssp CCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEE
T ss_pred CCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEE
Confidence 23344555431 2334567788999999742 2 567889876 22
Q ss_pred ----------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 115 ----------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 115 ----------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|+.+.........+|.|.+++.+|+|.|+|.| +
T Consensus 182 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 182 IYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 22222111233557999999999999999999 5
No 26
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.83 E-value=3.6e-19 Score=130.66 Aligned_cols=155 Identities=16% Similarity=0.209 Sum_probs=112.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+|.+++..+..+. ...++|+.+.. .....+|.|.+++.+|+|.|+|.+ +..+..+..+.|
T Consensus 20 l~C~~~g~p~p~v~W~~~~~g~~~~~~~--~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 95 (389)
T 2jll_A 20 LVCDAEGEPIPEITWKRAVDGFTFTEGD--KSLDGRIEVKG--QHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYL 95 (389)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEECC----CCSSSSEEEEE--CSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEeecccCCeEEEEeCCCCceeccCc--CCCCCeEEEec--cCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEE
Confidence 689999999 999999843244443211 12367888765 245789999999999999999999 445666777888
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeE--------EEecCCCCceEEEEecccCcCCCeeE
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARF--------SVIHPQNSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~~~~L~i~~v~~~D~G~Y 142 (163)
.|..++ ....+..|..+.+.|.. .+...+.|++++..+ .+.. ......|.|.+++.+|+|.|
T Consensus 96 ~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y 173 (389)
T 2jll_A 96 DIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYS--TGRKMILEIAPTSDNDFGRY 173 (389)
T ss_dssp EEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEE--CSSCEEEEECCCSTTSSEEE
T ss_pred EEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEec--cCCEEEEEECCCChhhCEEE
Confidence 887542 12245678889999963 345678898876432 2211 12356799999999999999
Q ss_pred EEEc-CCCCCccEEEEEEEe
Q psy3125 143 ECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 143 ~C~a-~~~~~~~~~~~L~V~ 161 (163)
+|.| |..|..+..+.|.|.
T Consensus 174 ~C~a~N~~G~~~~~~~l~v~ 193 (389)
T 2jll_A 174 NCTATNHIGTRFQEYILALA 193 (389)
T ss_dssp EEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEEEec
Confidence 9999 888888888777764
No 27
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=3e-19 Score=119.39 Aligned_cols=150 Identities=14% Similarity=0.127 Sum_probs=101.1
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---CeeEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---~~~~~~~ 77 (163)
|.|.+.+.+..+.|+| ++..+... ..+. .....+.+|.|.+++.+|+|.|+|.+.+.. ..+..+.
T Consensus 23 L~C~~~~~~~~~~w~k--~g~~~~~~------~~~~----~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~ 90 (188)
T 1oll_A 23 ICCQGNYGAVEYQLHF--EGSLFAVD------RPKP----PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLD 90 (188)
T ss_dssp EEEECCTTCCEEEEEE--TTEEEEEE------CCSS----CTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEE
T ss_pred EEEecCCCCCEEEEEE--CCCccccc------cccc----CCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceE
Confidence 6799876558899998 33222210 0000 012357789999999999999999995421 2345667
Q ss_pred EEEEcCC--------CceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 78 LNVDDRG--------RGARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 78 l~V~~~~--------~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|.|.... +...+..|..+.+.|... ......|++++..+............|.|.+++.+|+|.|+|.| +
T Consensus 91 l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 170 (188)
T 1oll_A 91 LVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSY 170 (188)
T ss_dssp EEEESCSCCCEEEEESCSEEETTCEEEEEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEE
T ss_pred EEecccCCCCeEEECCCCccccCCEEEEEEEcCCCCCEEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEc
Confidence 7776421 123467788999999753 33467888877654322112244677999999999999999999 5
Q ss_pred CC---CCccEEEEEEEec
Q psy3125 148 TE---PKMNMAIMLNVDG 162 (163)
Q Consensus 148 ~~---~~~~~~~~L~V~~ 162 (163)
.. ...+..+.|.|.|
T Consensus 171 ~~~~~s~~S~~~~l~V~g 188 (188)
T 1oll_A 171 NNHAWSFPSEPVKLLVTG 188 (188)
T ss_dssp ETTEECCCCCCEEEEEEC
T ss_pred CCCcCCCCCCcEEEEecC
Confidence 43 3567889999976
No 28
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=4.7e-19 Score=122.88 Aligned_cols=159 Identities=16% Similarity=0.339 Sum_probs=103.1
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Eecc------eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TTNI------YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~~~------~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.| +.|.|+|.+... .+ .... ......+|+.+..+...+.++|.|.+++.+|+|.|+|.+.
T Consensus 22 L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 101 (247)
T 2ghw_B 22 LSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARD 101 (247)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeee
Confidence 689999886 789999854321 11 1100 0011246888876544568899999999999999999995
Q ss_pred CC-C--CeeEEEEEEEEcC---------------------CCceEeeCCCeEEEecCC--CCceeEEEEe--CCCe----
Q psy3125 68 TE-P--KMNMAIMLNVDDR---------------------GRGARLSAGPLLNFAFPD--LLTTNIYTYT--GDAR---- 115 (163)
Q Consensus 68 ~~-~--~~~~~~~l~V~~~---------------------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~--~~~~---- 115 (163)
+. . .....+.|.|..+ +....+..|..+.+.|.. .+...+.|++ ++..
T Consensus 102 n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~ 181 (247)
T 2ghw_B 102 RSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPL 181 (247)
T ss_dssp ETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEE
T ss_pred ccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEE
Confidence 53 1 1223446777643 122346678889999963 3345789987 3332
Q ss_pred --------------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC-CCccEEEEEEEe
Q psy3125 116 --------------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE-PKMNMAIMLNVD 161 (163)
Q Consensus 116 --------------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~-~~~~~~~~L~V~ 161 (163)
+.+. .......|.|.+++.+|+|.|+|.| +.. ........|.|.
T Consensus 182 ~~~~~~~~~~~~~r~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 182 IYDASTRATGIPDRFSGS--GSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EETTTEECTTCCTTEEEE--CSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEeccCCCccCCCEEEe--cCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 2221 1234567999999999999999999 542 233345566665
No 29
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.82 E-value=1.4e-19 Score=124.88 Aligned_cols=152 Identities=18% Similarity=0.345 Sum_probs=102.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+.... ......... ...+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 35 L~C~~~~~p~~~v~W~~--~~~~~~~~~----~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l 104 (241)
T 3grw_A 35 FRCPAAGNPTPSISWLK--NGREFRGEH----RIGGIKLRH----QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 104 (241)
T ss_dssp EECCEECSSCCEEEEEE--TTEECCGGG----STTCCEEEG----GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEecCCCCceeEEEE--CCcccCCCC----cccceeeec----cceEEEEEeCCcccCEEEEEEEeecCCceEEEEEE
Confidence 679999998 9999998 332221111 011112221 35579999999999999999994 44555667778
Q ss_pred EEEcCC-----------CceEeeCCCeEEEecC--CCCceeEEEEe----CCCeEE--------Ee----cCCCCceEEE
Q psy3125 79 NVDDRG-----------RGARLSAGPLLNFAFP--DLLTTNIYTYT----GDARFS--------VI----HPQNSDEWNM 129 (163)
Q Consensus 79 ~V~~~~-----------~~~~v~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~--------~~----~~~~~~~~~L 129 (163)
.|.... ....+..|..+.+.|. ..+.+.+.|++ ++..+. .. .........|
T Consensus 105 ~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L 184 (241)
T 3grw_A 105 DVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRL 184 (241)
T ss_dssp EEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEE
T ss_pred EEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEE
Confidence 877531 2234556788889886 34456889988 332111 00 0111235679
Q ss_pred EecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 130 KIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 130 ~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.|.+++.+|+|.|+|.| |..|..+..+.|.|.+
T Consensus 185 ~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 185 RLANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred EECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 99999999999999999 9899999999999875
No 30
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.82 E-value=7.4e-19 Score=119.62 Aligned_cols=151 Identities=15% Similarity=0.157 Sum_probs=99.4
Q ss_pred CceEEecCCCcEEEEEe-cCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC--eeEEEE
Q psy3125 1 MACTVMGLGRPVSWMRK-RDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK--MNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~--~~~~~~ 77 (163)
|.|.+.+.++.|.|+|. +++.++. ...++.... ...|.|.+++.+|+|.|+|.+.+... .+..+.
T Consensus 29 L~C~~~~p~~~v~w~~~~~~g~~~~-------~~~~~~~~~-----~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~ 96 (213)
T 2x1w_L 29 IPCLGSISNLNVSLCARYPEKRFVP-------DGNRISWDS-----KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYI 96 (213)
T ss_dssp ECCCBSSTTCCEEEEEETTTEEECC-------CSSSCEEET-----TTEEEEEGGGTTTCSEEEEEEC----CEECCCEE
T ss_pred EeeccCCCCcEEEEEhhcCCCcccc-------CCCcccccC-----CccEEEccCChhcCceEEEEEEECCeeEEEEEEE
Confidence 68999873399999984 1232221 122333322 33599999999999999999954322 222355
Q ss_pred EEEEc---------CCCceEeeCCCeEEEecCCC----CceeEEEEeCCCeE---EE---ecC--C----CCceEEEEec
Q psy3125 78 LNVDD---------RGRGARLSAGPLLNFAFPDL----LTTNIYTYTGDARF---SV---IHP--Q----NSDEWNMKID 132 (163)
Q Consensus 78 l~V~~---------~~~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~---~~~--~----~~~~~~L~i~ 132 (163)
|.|.. ++....+..|..+.+.|... ....+.|++++... .. ... . ......|.|.
T Consensus 97 l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 176 (213)
T 2x1w_L 97 VVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTID 176 (213)
T ss_dssp EEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEES
T ss_pred EEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEEC
Confidence 55532 12233677889999999743 22368898876631 11 111 1 1224579999
Q ss_pred ccCcCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 133 YAQKRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 133 ~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
+++.+|+|.|+|.| |..|..+..+.|.|..+
T Consensus 177 ~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~ 208 (213)
T 2x1w_L 177 GVTRSDQGLYTCAASSGLMTKKNSTFVRVHED 208 (213)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-
T ss_pred CCCcccCEEEEEEEecCCCcEEEEEEEEEecc
Confidence 99999999999999 98999999999999764
No 31
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.82 E-value=3.1e-19 Score=120.24 Aligned_cols=154 Identities=10% Similarity=0.050 Sum_probs=107.1
Q ss_pred CceEEecCC------CcEEEEEecCCeeEEecceEecCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEeeC-CCCe
Q psy3125 1 MACTVMGLG------RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVNT-EPKM 72 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~ 72 (163)
|.|.+.+.+ +.|.|+|.+.... ...+|+.+..+. ..++.+|.|.+++.+|+|.|+|.+.+ ....
T Consensus 22 L~C~~~~~p~~~~~~~~v~W~k~~~~~~--------~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 93 (202)
T 3bp6_B 22 LECDFDRRECTELEGIRASLQKVENDTS--------LQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWD 93 (202)
T ss_dssp EEEEECTTC---CTTEEEEEEECC--CC--------CBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEEecCCCCCCccceEEEEEcCCCccc--------ccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcc
Confidence 679998875 6799998322211 124566655421 12468999999999999999999954 4445
Q ss_pred eEEEEEEEEcCCCceE-----eeCCCeEEEecCC--CCceeEEEEeCCCeEEEe--cCCCCceEEEEecccCcCCCeeEE
Q psy3125 73 NMAIMLNVDDRGRGAR-----LSAGPLLNFAFPD--LLTTNIYTYTGDARFSVI--HPQNSDEWNMKIDYAQKRDAGIYE 143 (163)
Q Consensus 73 ~~~~~l~V~~~~~~~~-----v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~i~~v~~~D~G~Y~ 143 (163)
...+.|.|..++..+. +..|..+.+.|.. .+.+.+.|+.++...... .........+.|.+++.+|+|.|+
T Consensus 94 ~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~ 173 (202)
T 3bp6_B 94 YKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFS 173 (202)
T ss_dssp EEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCCEE
T ss_pred eEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCEEE
Confidence 6778888887644332 2357888999963 455788888776543221 122233456788899999999999
Q ss_pred EEc-CCCCCccEEEEEEEec
Q psy3125 144 CQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 144 C~a-~~~~~~~~~~~L~V~~ 162 (163)
|.| |..+..+..+.|.|.+
T Consensus 174 C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 174 CMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEEEETTTTEEEEEEECC--
T ss_pred EEEEcCCcccccEEEEEecC
Confidence 999 8889999999888764
No 32
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.82 E-value=4.8e-19 Score=118.60 Aligned_cols=150 Identities=13% Similarity=0.230 Sum_probs=102.3
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCC-----eEEEEEcccCcCCCeeEEEEeeCCC-C-
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSD-----EWNMKIDYAQKRDAGIYECQVNTEP-K- 71 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~~~~~~-~- 71 (163)
|.|.+. +.| +.|.|+| ++..+.... ..++.+....+.. ..+|.|.+++.+|+|.|+|.+.+.. .
T Consensus 22 l~C~~~~~~p~~~v~W~~--~g~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 94 (195)
T 2c5d_C 22 LRCQLQVQGEPPEVHWLR--DGQILELAD-----STQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTF 94 (195)
T ss_dssp EEEEEEEESSCCCCEEEE--TTEECCSCE-----EEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred EecccccCCCCcEEEEEE--CCEEcccCC-----CCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCce
Confidence 679999 888 9999998 333332111 1234444322111 4689999999999999999995432 2
Q ss_pred eeEEEEEEEEcCC------CceEeeCCCeEEEecCC--CCce-eEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeE
Q psy3125 72 MNMAIMLNVDDRG------RGARLSAGPLLNFAFPD--LLTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 72 ~~~~~~l~V~~~~------~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 142 (163)
.+..+.|.|..++ ....+..|..+.+.|.. .+.+ .+.|++++..+.... .......|.|.+++ |+|.|
T Consensus 95 ~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~-~~~~~~~L~i~~~~--d~G~Y 171 (195)
T 2c5d_C 95 VSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP-GHGPQRSLHVPGLN--KTSSF 171 (195)
T ss_dssp ECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSST-TSSCCEEEEECCCS--SCEEE
T ss_pred ecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCC-CcCCCCeEEEcccc--cCceE
Confidence 2334677776543 33456678889999963 4455 789998876443221 11356779999998 89999
Q ss_pred EEEc-CCCCCcc-EEEEEEE
Q psy3125 143 ECQV-NTEPKMN-MAIMLNV 160 (163)
Q Consensus 143 ~C~a-~~~~~~~-~~~~L~V 160 (163)
+|.| |..|... ..+.|.|
T Consensus 172 ~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 172 SCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEEETTEEEECCCEEEEE
T ss_pred EEEEEcCCCceEEEEEEEEE
Confidence 9999 8888774 7888887
No 33
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.82 E-value=5.7e-19 Score=125.85 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=108.1
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+. +.| +.+.|+| ++.. +....|+.+.........+|.|.+++.+|+|.|+|.+.+ +.......+
T Consensus 127 l~C~~~~~~p~~~v~W~~--~~~~-------i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~-~~~~~~~~~ 196 (312)
T 2y23_A 127 FWMQAEKLSGNAKVNYIF--NEKE-------IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD-GKATNHSTV 196 (312)
T ss_dssp EEEEESCCCSSCEEEEEE--TTEE-------ECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEES-SSCEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEE--CCEE-------CeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEe-CCceEEEEE
Confidence 579999 788 9999998 3322 234467776654335578899999999999999999954 223333333
Q ss_pred EEE---------------------cCC-----CceEeeCCCeEEEecCC--CCce-eEEEEeCCCeEEEecC--CCCceE
Q psy3125 79 NVD---------------------DRG-----RGARLSAGPLLNFAFPD--LLTT-NIYTYTGDARFSVIHP--QNSDEW 127 (163)
Q Consensus 79 ~V~---------------------~~~-----~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~--~~~~~~ 127 (163)
.+. .++ ....+..|..+.+.|.. .+.+ .+.|++++..+..... ......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~ 276 (312)
T 2y23_A 197 VLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGIC 276 (312)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEE
T ss_pred EEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEE
Confidence 331 011 02367788999999963 3344 7899998776653321 113356
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.|.|.+++.+|+|.|+|.| |..|..+..+.|.|++
T Consensus 277 ~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~~ 312 (312)
T 2y23_A 277 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 312 (312)
T ss_dssp EEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSCC
T ss_pred EEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEecC
Confidence 8999999999999999999 9999999999998864
No 34
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.82 E-value=1e-18 Score=121.97 Aligned_cols=159 Identities=18% Similarity=0.278 Sum_probs=102.8
Q ss_pred CceEEecC--C-CcEEEEEecCCe----eEEec---c---eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLH----ILTTN---I---YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~----~~~~~---~---~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. + +.|.|+|..... ++... . ......+|+.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 26 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 105 (256)
T 3juy_B 26 VSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARV 105 (256)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcccCEEEEEeEE
Confidence 68999984 4 899999854221 11111 0 0111246898886545668899999999999999999995
Q ss_pred CC-------------CCeeEEEEEEEEcC---------------------CCceEeeCCCeEEEecCCC--Cc-eeEEEE
Q psy3125 68 TE-------------PKMNMAIMLNVDDR---------------------GRGARLSAGPLLNFAFPDL--LT-TNIYTY 110 (163)
Q Consensus 68 ~~-------------~~~~~~~~l~V~~~---------------------~~~~~v~~~~~~~~~~~~~--~~-~~~~~~ 110 (163)
+. ......+.|.|... +....+..|..+.+.|... .. ..+.|+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~ 185 (256)
T 3juy_B 106 GEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWY 185 (256)
T ss_dssp CCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEE
T ss_pred eccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEE
Confidence 43 22334556777653 2233566788899999632 22 678898
Q ss_pred eC--CC------------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC-CccEEEEEEEe
Q psy3125 111 TG--DA------------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP-KMNMAIMLNVD 161 (163)
Q Consensus 111 ~~--~~------------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-~~~~~~~L~V~ 161 (163)
+. +. |+.+.. ......|.|.+++.+|+|.|+|.| +... .....+.|.|+
T Consensus 186 k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V~ 256 (256)
T 3juy_B 186 QHKPGQAPRLVIHGVSNRASGISDRFSGSG--SGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLERK 256 (256)
T ss_dssp EECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECCSSCCEECCCEEEEEC
T ss_pred EECCCCCcEEEEEecCccCCccCCcEEEEc--cCCEEEEEECCCCHhHCEEEEEEEeeCCCceEcCCEEEEEC
Confidence 62 11 222111 123556999999999999999999 5332 23445566653
No 35
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.82 E-value=1.7e-19 Score=128.86 Aligned_cols=149 Identities=13% Similarity=0.098 Sum_probs=105.9
Q ss_pred ceEEec-CC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 2 ACTVMG-LG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 2 ~C~~~~-~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
.|.+.+ .| +.|.|+| ++..+ ....++.+.. ..+..+|.|.+++.+|+|.|+|.+.+ .+.....+.|
T Consensus 128 ~c~~~~~~p~~~i~W~~--~~~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 196 (317)
T 2y25_A 128 YSFVTYYVEDLKVNWSH--NGSAI-------RYSDRVKTGV--TGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDL 196 (317)
T ss_dssp EEEBSSCCSSCEEEEEE--SSSBC-------CCCSSEEEEE--CSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEeccCCCCcEEEEEE--CCEEC-------CCCCCeEEec--cCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEE
Confidence 466665 46 9999998 22222 2345666654 33567899999999999999999954 4444455555
Q ss_pred EEEc---------------------------CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEE------EecCCC
Q psy3125 79 NVDD---------------------------RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFS------VIHPQN 123 (163)
Q Consensus 79 ~V~~---------------------------~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~ 123 (163)
.|.. .+....+..|..+.+.|.. .+.+.+.|++++..+. +.. ..
T Consensus 197 ~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~-~~ 275 (317)
T 2y25_A 197 SGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKF-EA 275 (317)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECC-BT
T ss_pred eeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEE-cC
Confidence 4321 1233567788888999863 4556799998876442 221 11
Q ss_pred CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 124 SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 124 ~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.....|.|.+++.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 276 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 276 GRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp TTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 34568999999999999999999 9999999999999975
No 36
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.82 E-value=3.3e-19 Score=120.89 Aligned_cols=136 Identities=15% Similarity=0.215 Sum_probs=99.7
Q ss_pred CceEEecCC-Cc-EEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RP-VSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~-v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.+ +. |.|+| ++..+. ....+|.|.+++.+|+|.|+|.+.+ ...+..+.|
T Consensus 27 L~C~~~~~p~~~~v~W~k--~g~~l~-------------------~~~~~L~i~~v~~~D~G~Y~C~a~n-~~~s~~~~l 84 (204)
T 3sgj_C 27 LKCQGAYSPEDQSTQWFH--NESLIS-------------------SQASSYFIDAATVDDSGEYRCQTQL-STLSDPVQL 84 (204)
T ss_dssp EEEECCSSSSCCCEEEEE--TTEEES-------------------CCSSEEEESSCCGGGCEEEEEEETT-SBCCCCEEE
T ss_pred EEEcCCCCCCCcEEEEEE--CCEEcc-------------------cCccEEEEecccccCCEEEEEEeCC-CcccccEEE
Confidence 679999988 54 99998 332221 1125699999999999999999954 344556677
Q ss_pred EEEcCC-----CceEeeCCCeEEEecCCC---CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-C-C
Q psy3125 79 NVDDRG-----RGARLSAGPLLNFAFPDL---LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N-T 148 (163)
Q Consensus 79 ~V~~~~-----~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~-~ 148 (163)
.|..++ +...+..|..+.+.|... +...+.|++++..+..... ...|.|.+++.+|+|.|+|.| | .
T Consensus 85 ~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~ 160 (204)
T 3sgj_C 85 EVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHH----NSDFYIPKATLKDSGSYFCRGLVGS 160 (204)
T ss_dssp EEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEE----CCCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccC----CceEEECcCCcccCEEEEEEEEeCC
Confidence 776542 234667888999999652 3467899988876543321 235999999999999999999 6 4
Q ss_pred CCCccEEEEEEEec
Q psy3125 149 EPKMNMAIMLNVDG 162 (163)
Q Consensus 149 ~~~~~~~~~L~V~~ 162 (163)
.+..+..+.|.|.+
T Consensus 161 ~~~~s~~~~l~V~~ 174 (204)
T 3sgj_C 161 KNVSSETVQITITQ 174 (204)
T ss_dssp EEEECCCEEEEEEC
T ss_pred CceecCcEEEEEeC
Confidence 45677788888875
No 37
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.82 E-value=2.7e-18 Score=119.66 Aligned_cols=160 Identities=17% Similarity=0.278 Sum_probs=104.0
Q ss_pred CceEEecCC---CcEEEEEecCCee---EEec-------ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHI---LTTN-------IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~---~~~~-------~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|...... +... .......+|+.+..+...+.++|.|.+++.+|+|.|+|.+.
T Consensus 21 L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 100 (253)
T 3uzq_A 21 LSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGDTAVYYCSRG 100 (253)
T ss_dssp EEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEe
Confidence 689999854 8999999543221 1110 01112247888886555668899999999999999999995
Q ss_pred CCCC--eeEEEEEEEEcC---------------------CCceEeeCCCeEEEecCCC--Cce----eEEEEeCC--C--
Q psy3125 68 TEPK--MNMAIMLNVDDR---------------------GRGARLSAGPLLNFAFPDL--LTT----NIYTYTGD--A-- 114 (163)
Q Consensus 68 ~~~~--~~~~~~l~V~~~---------------------~~~~~v~~~~~~~~~~~~~--~~~----~~~~~~~~--~-- 114 (163)
+... ....+.|.|... +....+..|..+.+.|... +.. .+.|++.. .
T Consensus 101 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~ 180 (253)
T 3uzq_A 101 WEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPP 180 (253)
T ss_dssp SSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCC
T ss_pred eCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCC
Confidence 5322 234556666631 2234567789999999632 233 78898731 1
Q ss_pred ----------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC-CccEEEEEEEec
Q psy3125 115 ----------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP-KMNMAIMLNVDG 162 (163)
Q Consensus 115 ----------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-~~~~~~~L~V~~ 162 (163)
|+.... ......|.|.+++.+|+|.|+|.| +..+ .......|.|.+
T Consensus 181 ~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 181 KLLIYRASNLESGIPARFSGSG--SRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp EEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred EEEEEEccccCCccCCceEEeC--CCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 222211 123557999999999999999999 5432 334566677654
No 38
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.82 E-value=1.5e-18 Score=120.31 Aligned_cols=145 Identities=13% Similarity=0.239 Sum_probs=94.3
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC--e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK--M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~--~ 72 (163)
|.|.+.+.+ +.|.|+|.+.. ..+........ ..+||.+.. ..+..+|.|.+++.+|+|.|.|.+.+... .
T Consensus 21 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~ 98 (242)
T 2znx_A 21 LSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG--SGTDFTLSINSVETEDFGMYFCQQSNSXPYTF 98 (242)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec--CCCEEEEEECCCChHHCEEEEEeEecCCceEE
Confidence 689999998 99999986421 22221111111 256888764 34578999999999999999999955322 2
Q ss_pred eEEEEEEEEcCC-------------------CceEeeCCCeEEEecCCC----CceeEEEEeCC--C-------------
Q psy3125 73 NMAIMLNVDDRG-------------------RGARLSAGPLLNFAFPDL----LTTNIYTYTGD--A------------- 114 (163)
Q Consensus 73 ~~~~~l~V~~~~-------------------~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~--~------------- 114 (163)
...+.|.|..++ ....+..|..+.+.|... ....+.|++.. .
T Consensus 99 ~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~ 178 (242)
T 2znx_A 99 GGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGS 178 (242)
T ss_dssp CCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSC
T ss_pred CCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCc
Confidence 234456665432 123466788899999642 13568888742 2
Q ss_pred ---------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 115 ---------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 115 ---------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|+.+..........|.|.+++.+|+|.|+|.| +
T Consensus 179 ~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 221 (242)
T 2znx_A 179 TYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXD 221 (242)
T ss_dssp EEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETT
T ss_pred cccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccC
Confidence 22222111234568999999999999999999 5
No 39
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.82 E-value=1.2e-18 Score=116.20 Aligned_cols=152 Identities=19% Similarity=0.257 Sum_probs=103.5
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC--CCeeEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE--PKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~--~~~~~~~ 76 (163)
|.|.+.+.+ +.+.|+|.++..+. ....|+.+... .....+|.|.+++.+|+|.|+|.+.+. ...+..+
T Consensus 22 l~C~~~~~~~~~~v~W~~~~g~~~~-------~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 93 (191)
T 1epf_A 22 FLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWN-DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATV 93 (191)
T ss_dssp EEEEECCCSCCCEEEEECTTSCEEC-------CBSSSEEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEE
T ss_pred EEEECCCCCCCceEEEEeCCCcccc-------CCCCeEEEEEC-CCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEE
Confidence 679999875 89999974433332 13556666542 235788999999999999999999543 3455666
Q ss_pred EEEEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC---CCceEEEEecccCcCCCeeEEEE
Q psy3125 77 MLNVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 77 ~l~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
.|.|..+ +....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.|+|.
T Consensus 94 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 173 (191)
T 1epf_A 94 NVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCE 173 (191)
T ss_dssp EEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred EEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEE
Confidence 7777654 234456778889999963 455678998876533211100 00122599999999999999999
Q ss_pred c-CCCCCccEEEEEEE
Q psy3125 146 V-NTEPKMNMAIMLNV 160 (163)
Q Consensus 146 a-~~~~~~~~~~~L~V 160 (163)
| |..+.......+.|
T Consensus 174 a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 174 GRILARGEINFKDIQV 189 (191)
T ss_dssp EEEGGGTEEEEEEEEE
T ss_pred EEEecceeEEEEEEEE
Confidence 9 76655555555544
No 40
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.82 E-value=5.7e-19 Score=124.72 Aligned_cols=160 Identities=16% Similarity=0.272 Sum_probs=100.6
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEec-ceEe-cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-C-e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTN-IYTY-TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-K-M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~-~~~~-~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~-~ 72 (163)
|.|.+.+.+ +.|.|+|.+.. ..+... .... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+.. . .
T Consensus 32 L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~ 109 (276)
T 3auv_A 32 ITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG--SGTDFTLTISSLQPEDFATYYCQQHYTTPPTF 109 (276)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCCC
T ss_pred EEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec--cCCeEEEEEccCChhhCEEEEEEEecCCcccc
Confidence 689999998 99999986432 122211 1111 1256888764 3457899999999999999999995432 1 2
Q ss_pred eEEEEEEEEcCC--------------------CceEeeCCCeEEEecCCC--C--ceeEEEEeCC--C------------
Q psy3125 73 NMAIMLNVDDRG--------------------RGARLSAGPLLNFAFPDL--L--TTNIYTYTGD--A------------ 114 (163)
Q Consensus 73 ~~~~~l~V~~~~--------------------~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~~--~------------ 114 (163)
...+.|.|..++ ....+..|..+.+.|... + ...+.|++.+ .
T Consensus 110 ~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~ 189 (276)
T 3auv_A 110 GCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAG 189 (276)
T ss_dssp CCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGG
T ss_pred cCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccC
Confidence 333456655431 233556788899999642 2 4678898753 1
Q ss_pred -----------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC---C--CccEEEEEEEec
Q psy3125 115 -----------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE---P--KMNMAIMLNVDG 162 (163)
Q Consensus 115 -----------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~---~--~~~~~~~L~V~~ 162 (163)
|+.+..........|.|.+++.+|+|.|+|.| |.. + .......|.|..
T Consensus 190 ~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~ 254 (276)
T 3auv_A 190 GYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSS 254 (276)
T ss_dssp CCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC-
T ss_pred CccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEcc
Confidence 22221111123457999999999999999999 652 1 223456676653
No 41
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.82 E-value=7.3e-19 Score=122.99 Aligned_cols=162 Identities=14% Similarity=0.247 Sum_probs=103.4
Q ss_pred CceEEecCC---CcEEEEEecCC-ee--EEecc-----eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL-HI--LTTNI-----YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~-~~--~~~~~-----~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.. .+ +.... ... ...+|+.+......+..+|.|.+++.+|+|.|+|.+.
T Consensus 20 L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 99 (256)
T 1nqb_A 20 LSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARY 99 (256)
T ss_dssp EEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEe
Confidence 689999874 79999986432 11 11110 000 1247888876434568899999999999999999995
Q ss_pred CC-C-----CeeEEEEEEEEcC------CCceEeeCCCeEEEecCCC--Cc-----eeEEEEe--CCCeEEEe--c----
Q psy3125 68 TE-P-----KMNMAIMLNVDDR------GRGARLSAGPLLNFAFPDL--LT-----TNIYTYT--GDARFSVI--H---- 120 (163)
Q Consensus 68 ~~-~-----~~~~~~~l~V~~~------~~~~~v~~~~~~~~~~~~~--~~-----~~~~~~~--~~~~~~~~--~---- 120 (163)
+. + .....+.|.|..+ +....+..|..+.+.|... +. ..+.|++ ++...... .
T Consensus 100 n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~ 179 (256)
T 1nqb_A 100 DYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNR 179 (256)
T ss_dssp CTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEE
T ss_pred eccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCC
Confidence 43 2 1223456666543 2334577889999999632 22 3789988 34322110 0
Q ss_pred ----------CCCCceEEEEecccCcCCCeeEEEEc-CCCC-CccEEEEEEEec
Q psy3125 121 ----------PQNSDEWNMKIDYAQKRDAGIYECQV-NTEP-KMNMAIMLNVDG 162 (163)
Q Consensus 121 ----------~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-~~~~~~~L~V~~ 162 (163)
........|.|.+++.+|+|.|+|.| +... .......|.|..
T Consensus 180 ~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 180 FSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp CTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 00123567999999999999999999 5322 233455666653
No 42
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.82 E-value=3.9e-19 Score=117.45 Aligned_cols=137 Identities=15% Similarity=0.230 Sum_probs=99.1
Q ss_pred CceEEecCC-Cc-EEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RP-VSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~-v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.+ +. +.|+| ++..+. ..+.+|.|.+++.+|+|.|+|.+.+. ..+..+.|
T Consensus 27 L~C~~~~~p~~~~~~W~~--~~~~~~-------------------~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~s~~~~l 84 (175)
T 1fnl_A 27 LKCQGAYSPEDNSTQWFH--NESLIS-------------------SQASSYFIDAATVNDSGEYRCQTNLS-TLSDPVQL 84 (175)
T ss_dssp EEEECCCBTTBCCCEEEE--TTEEEE-------------------SSCSEEEESSCCGGGCEEEEEECSSS-CCCCCEEE
T ss_pred EEeeCCCCCCCcceEEEE--CCEEcc-------------------CCceEEEEeCCCcccCEEEEEEeeCC-cccccEEE
Confidence 679999988 44 78998 332221 12457999999999999999999542 33556667
Q ss_pred EEEcC-----CCceEeeCCCeEEEecCCC--C-ceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDR-----GRGARLSAGPLLNFAFPDL--L-TTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~-----~~~~~v~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..+ .+...+..|..+.+.|... . ...+.|++++..+.... ....|.|.+++.+|+|.|+|.| |..
T Consensus 85 ~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~ 160 (175)
T 1fnl_A 85 EVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFH----HNSDFHIPKATLKDSGSYFCRGLVGS 160 (175)
T ss_dssp EEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEE----ECCCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCC----CCCEEEEcccChhhCeEEEEEEEcCC
Confidence 77643 2234566788899999532 2 34889999887664332 1345999999999999999999 644
Q ss_pred -CCccEEEEEEEecC
Q psy3125 150 -PKMNMAIMLNVDGK 163 (163)
Q Consensus 150 -~~~~~~~~L~V~~~ 163 (163)
...+..+.|.|.|+
T Consensus 161 ~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 161 KNVSSETVNITITQA 175 (175)
T ss_dssp EEEECCCEEEEEECC
T ss_pred CCccCccEEEEEeCC
Confidence 45778899999875
No 43
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.82 E-value=7.6e-19 Score=122.74 Aligned_cols=149 Identities=13% Similarity=0.277 Sum_probs=99.0
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEe--cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTT--NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--- 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--- 70 (163)
|.|.+.+.+ +.|.|+|..... +... +.......+||.+........++|.|.+++.+|+|.|+|.+.+..
T Consensus 23 L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~ 102 (256)
T 3tf7_C 23 LRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCAVSAKGTGS 102 (256)
T ss_dssp ECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEEEECTTCTT
T ss_pred EEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEEEecCCCcc
Confidence 689999999 999999854221 1111 222233467888864445678999999999999999999995432
Q ss_pred --CeeEEEEEEEEc--------------------------CCCceEeeCCCeEEEecCCC-CceeEEEEeCC--C-----
Q psy3125 71 --KMNMAIMLNVDD--------------------------RGRGARLSAGPLLNFAFPDL-LTTNIYTYTGD--A----- 114 (163)
Q Consensus 71 --~~~~~~~l~V~~--------------------------~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~--~----- 114 (163)
.....+.|.|.. .+....+..|..+.+.|... ....+.|++.. .
T Consensus 103 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~ 182 (256)
T 3tf7_C 103 KLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNSHNYMYWYRQDTGHELRLI 182 (256)
T ss_dssp CEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSCCSEEEEEEECTTSCEEEE
T ss_pred ceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCCceEEEEEEECCCCCeEEE
Confidence 123345666665 12233556788899999632 24578887632 1
Q ss_pred ----------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 115 ----------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 115 ----------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
|+.+.. .......|.|.+++.+|+|.|+|.| |..+
T Consensus 183 ~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g 234 (256)
T 3tf7_C 183 YYSYGAGNLQIGDVPDGYKATR-TTQEDFFLTLESASPSQTSLYFCASSDAPG 234 (256)
T ss_dssp EEEESTTCCEECSCCTTCEEEC-CSSSBCEEEESSCCGGGCEEEEEEEEEETT
T ss_pred EEEcCCCceecCccCCceEEEe-CCCCeEEEEECCCCHHHCEEEEEEecCCCC
Confidence 111111 1234557999999999999999999 6544
No 44
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.82 E-value=4.9e-19 Score=118.03 Aligned_cols=150 Identities=21% Similarity=0.294 Sum_probs=103.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CC-eeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PK-MNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~-~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+. ..+.|+.+... ..+|.|.+++.+|+|.|+|.+.+. +. ....+.
T Consensus 27 l~C~~~~~p~~~i~W~~--~~~~~~------~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 94 (192)
T 2iep_A 27 FMCAVESYPQPEISWTR--NKILIK------LFDTRYSIREN----GQLLTILSVEDSDDGIYCCTANNGVGGAVESCGA 94 (192)
T ss_dssp EECCEEEESCCEEEEEE--TTEECC------TTCTTEEEEGG----GTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEE
T ss_pred EEeeCCCCCCCeEEEEE--CCEEcc------ccCccEEEcCC----ccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEE
Confidence 579999988 9999998 332221 23567776642 347999999999999999999542 32 344555
Q ss_pred EEEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC-CCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 78 LNVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 78 l~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|.|..+ +....+..|..+.+.|.. .+...+.|++++..+...... ......|.|.+++.+|+|.|+|.| |
T Consensus 95 l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 174 (192)
T 2iep_A 95 LQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKN 174 (192)
T ss_dssp EEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEc
Confidence 665543 334567788889999963 344578898876533211100 001225999999999999999999 8
Q ss_pred CCCCc-cEEEEEEEec
Q psy3125 148 TEPKM-NMAIMLNVDG 162 (163)
Q Consensus 148 ~~~~~-~~~~~L~V~~ 162 (163)
..|.. +..+.|.|..
T Consensus 175 ~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 175 SLGTAYSKLVKLEVEV 190 (192)
T ss_dssp TTEEEECCCEEEEEEC
T ss_pred CCCcEEEEEEEEEEEe
Confidence 87766 5678888864
No 45
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.81 E-value=3.3e-20 Score=124.05 Aligned_cols=127 Identities=13% Similarity=0.227 Sum_probs=87.2
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcc-cCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDY-AQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
|.|.+.+ ++.|.|+| ++..+. . ..+.+|.|.+ ++.+|+|.|+|.+.+ .+..+..+.+
T Consensus 19 L~C~~~~-~~~i~W~k--~g~~l~-------~-----------~~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 19 LTCPLDS-DENLKWEK--NGQELP-------Q-----------KHDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EECSSCC-CTTCEEEE--TTEEEC-------S-----------CCCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EEEeCCC-CCceEEEE--CCEECC-------C-----------CCCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 5799887 65599998 332221 1 0234699999 999999999999944 3444444444
Q ss_pred EEEcCCCc-------------------------------eEeeCCCeEEEecCCCCceeEEEEeCCCeEEEecCCCCceE
Q psy3125 79 NVDDRGRG-------------------------------ARLSAGPLLNFAFPDLLTTNIYTYTGDARFSVIHPQNSDEW 127 (163)
Q Consensus 79 ~V~~~~~~-------------------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (163)
.|...... ..+..|..+.+.|.. +.+.+.|++++..+... .....
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-p~p~i~W~k~g~~i~~~---~~~~~ 153 (186)
T 1jbj_A 78 RVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-TDKTIKWLKDGSIISPL---NATKN 153 (186)
T ss_dssp CCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-SCSCEEEEETTEECCCS---SCCSS
T ss_pred EEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC-CCCeEEEEECCEECccc---CCCcc
Confidence 44322100 122378899999988 67889999987754311 12345
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCc
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKM 152 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~ 152 (163)
.|.|.+++.+|+|.|+|.| |..+..
T Consensus 154 ~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 154 TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 6999999999999999999 776654
No 46
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.81 E-value=1.2e-18 Score=121.61 Aligned_cols=160 Identities=13% Similarity=0.245 Sum_probs=103.3
Q ss_pred CceEEecCC---CcEEEEEecCCee---EE-e------cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHI---LT-T------NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~---~~-~------~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|...... +. . ........+||.+......+.++|.|.+++.+|+|.|.|.+.
T Consensus 22 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 101 (256)
T 3umt_A 22 ISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARD 101 (256)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcccCEEEEEEEc
Confidence 689999865 8999998643221 11 0 000111347888876444568899999999999999999995
Q ss_pred CC-----CCeeEEEEEEEEcC----------------------CCceEeeCCCeEEEecCC--CCceeEEEEeCC--C--
Q psy3125 68 TE-----PKMNMAIMLNVDDR----------------------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGD--A-- 114 (163)
Q Consensus 68 ~~-----~~~~~~~~l~V~~~----------------------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~--~-- 114 (163)
+. ......+.|.|... +....+..|..+.+.|.. .+...+.|++.. .
T Consensus 102 ~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~ 181 (256)
T 3umt_A 102 DRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTI 181 (256)
T ss_dssp CSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCE
T ss_pred cCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCc
Confidence 43 22334556777641 222456678889999963 233478888731 1
Q ss_pred ----------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC-CccEEEEEEEec
Q psy3125 115 ----------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP-KMNMAIMLNVDG 162 (163)
Q Consensus 115 ----------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-~~~~~~~L~V~~ 162 (163)
|+.... ......|.|.+++.+|+|.|+|.| +... .....+.|.|.+
T Consensus 182 ~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 182 KRLIYATSSLDSGVPKRFSGSR--SGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp EEEEETTTEECTTSCTTEEEEE--ETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEEeccccCCccCCCEEEec--CCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 122111 123556999999999999999999 5332 234567777764
No 47
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.81 E-value=8.8e-20 Score=123.02 Aligned_cols=155 Identities=15% Similarity=0.199 Sum_probs=106.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeE--EecceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC---CCee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHIL--TTNIYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE---PKMN 73 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~--~~~~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~---~~~~ 73 (163)
|.|.+.+.| +.|.|+|.+..... ...... .....|+.+.. .+|.|.+++.+|+|.|+|.+.+. ...+
T Consensus 24 L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~------~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~ 97 (209)
T 1nbq_A 24 LSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP------TGITFKSVTREDTGTYTCMVSEEGGNSYGE 97 (209)
T ss_dssp EECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET------TEEECSCCCTTSCSEEEEEEEETTSSCEEC
T ss_pred EEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec------cEEEEeeCCHHHCcEEEEEEecCCCCccce
Confidence 679999988 99999985443211 111111 11234555542 57999999999999999999542 2345
Q ss_pred EEEEEEEEcCCCc------eEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecC-----------CCCceEEEEecc
Q psy3125 74 MAIMLNVDDRGRG------ARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHP-----------QNSDEWNMKIDY 133 (163)
Q Consensus 74 ~~~~l~V~~~~~~------~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~L~i~~ 133 (163)
..+.|.|..++.. ..+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+
T Consensus 98 ~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 177 (209)
T 1nbq_A 98 VKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDP 177 (209)
T ss_dssp CEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESS
T ss_pred EEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEe
Confidence 6677788766432 346678889999974 34568899988765432211 111345699999
Q ss_pred cCcCCCeeEEEEc-CCCCCc--cEEEEEEEe
Q psy3125 134 AQKRDAGIYECQV-NTEPKM--NMAIMLNVD 161 (163)
Q Consensus 134 v~~~D~G~Y~C~a-~~~~~~--~~~~~L~V~ 161 (163)
++.+|+|.|+|.| |..|.. +..+.|.|.
T Consensus 178 ~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 178 LSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp CCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred ccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 9999999999999 888877 566666664
No 48
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=5.2e-19 Score=122.46 Aligned_cols=157 Identities=20% Similarity=0.261 Sum_probs=99.4
Q ss_pred CceEEec---CC-CcEEEEEecCCe---eEEecce-----------------E-ecCCCeEEEeccCCCCeEEEEEcccC
Q psy3125 1 MACTVMG---LG-RPVSWMRKRDLH---ILTTNIY-----------------T-YTGDARFSVIHPQNSDEWNMKIDYAQ 55 (163)
Q Consensus 1 l~C~~~~---~~-~~v~W~k~~~~~---~~~~~~~-----------------~-~~~~~r~~~~~~~~~~~~~L~i~~v~ 55 (163)
|.|.+.+ .+ +.|.|+|.+... ++..+.. . ....+|+.+.. .++.+|.|.+++
T Consensus 22 L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~~L~I~~v~ 98 (250)
T 2fbo_J 22 LPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN---LAAPTLRLTHVH 98 (250)
T ss_dssp ECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC---TTSCCEEECSCC
T ss_pred EEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc---CCcceEEEeeCC
Confidence 6899997 66 899999854221 1111110 0 11245655543 235679999999
Q ss_pred cCCCeeEEEEeeCCCC------eeEEEEEEEEcC--CCc--------eEeeCCCeEEEecCC--CCceeEEEEeCCCeEE
Q psy3125 56 KRDAGIYECQVNTEPK------MNMAIMLNVDDR--GRG--------ARLSAGPLLNFAFPD--LLTTNIYTYTGDARFS 117 (163)
Q Consensus 56 ~~D~G~Y~C~~~~~~~------~~~~~~l~V~~~--~~~--------~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 117 (163)
.+|+|.|+|++.+... ....+.|.|..+ ++. ..+..|..+.+.|.. .+.+.+.|++++..+.
T Consensus 99 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~ 178 (250)
T 2fbo_J 99 PQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFE 178 (250)
T ss_dssp GGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSS
T ss_pred hhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCCccc
Confidence 9999999999954322 134777888764 111 233458889999963 3456888987753221
Q ss_pred E--------------------ecCCCC-----ceEEEEecccCcCCCeeEEEEc-CC---CCCccEEEEEEE
Q psy3125 118 V--------------------IHPQNS-----DEWNMKIDYAQKRDAGIYECQV-NT---EPKMNMAIMLNV 160 (163)
Q Consensus 118 ~--------------------~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~a-~~---~~~~~~~~~L~V 160 (163)
. ...... ....|.|.+++.+|+|.|+|.| |. .+....++.|.|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 179 NYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp CSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred ccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEEeC
Confidence 0 000001 1247999999999999999999 84 445556666654
No 49
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=2.4e-19 Score=125.41 Aligned_cols=162 Identities=19% Similarity=0.293 Sum_probs=102.5
Q ss_pred CceEEecCC---CcEEEEEecCC---eeEE-ec---ceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HILT-TN---IYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~~-~~---~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.| +.|.|+|.+.+ ..+. .. ...+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 99 (257)
T 1f3r_B 20 LTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDL 99 (257)
T ss_dssp EEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEES
T ss_pred EEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcc
Confidence 689999873 89999986321 1211 11 11111 2468888764345688999999999999999999955
Q ss_pred CC--------C--eeEEEEEEEEcCC---------------------CceEeeCCCeEEEecCCC--CceeEEEEe--CC
Q psy3125 69 EP--------K--MNMAIMLNVDDRG---------------------RGARLSAGPLLNFAFPDL--LTTNIYTYT--GD 113 (163)
Q Consensus 69 ~~--------~--~~~~~~l~V~~~~---------------------~~~~v~~~~~~~~~~~~~--~~~~~~~~~--~~ 113 (163)
.. . ....+.|.|..++ ....+..|..+.+.|... +...+.|++ ++
T Consensus 100 ~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g 179 (257)
T 1f3r_B 100 YGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLG 179 (257)
T ss_dssp SSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTT
T ss_pred cccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCC
Confidence 31 1 1234567776532 122356788899999642 335788988 33
Q ss_pred CeEE--EecC--------------CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 114 ARFS--VIHP--------------QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 114 ~~~~--~~~~--------------~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.... +... .......|.|.+++.+|+|.|+|.| |........+.|.|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 180 EAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKA 245 (257)
T ss_dssp SCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSS
T ss_pred CCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeC
Confidence 3221 1100 0123457999999999999999999 6532222344565554
No 50
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.81 E-value=8.5e-20 Score=122.68 Aligned_cols=150 Identities=12% Similarity=0.108 Sum_probs=98.2
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CC--CeeEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EP--KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~--~~~~~~~ 77 (163)
|.|.+.+.++.+.|+|.+.. +. . .+. .........+|.|.+++.+|+|.|+|.+.+ .+ ..+..+.
T Consensus 24 L~C~~~~~~~~~~w~k~g~~--~~-------~-~~~--~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~ 91 (196)
T 3p2t_A 24 IWCQGTLEAREYRLDKEESP--AP-------W-DRQ--NPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLE 91 (196)
T ss_dssp EEEECCTTCCEEEEEETTSC--SC-------S-EEE--CCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEE
T ss_pred EEeeCCCCCCEEEEEECCCC--Cc-------c-ccc--ccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEE
Confidence 67999994499999983221 11 0 000 000113467899999999999999999954 32 3355667
Q ss_pred EEEEcCC--------CceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEE-----ecCCCCceEEEEecccCcCCCeeEE
Q psy3125 78 LNVDDRG--------RGARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSV-----IHPQNSDEWNMKIDYAQKRDAGIYE 143 (163)
Q Consensus 78 l~V~~~~--------~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~D~G~Y~ 143 (163)
|.|.... +...+..|..+.+.|... ......|++++..... ..........|.|.+++.+|+|.|+
T Consensus 92 l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 171 (196)
T 3p2t_A 92 LVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYR 171 (196)
T ss_dssp EEEECSSCCCEEEEESCSEECTTCCEEEEEEEEEEEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEE
T ss_pred EEecCCCCCCEEEeCCcceecCCCeEEEEEecCCCCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEE
Confidence 7776431 112456788899999643 2346778877653210 0001123456999999999999999
Q ss_pred EEc-CCCC-----CccEEEEEEEec
Q psy3125 144 CQV-NTEP-----KMNMAIMLNVDG 162 (163)
Q Consensus 144 C~a-~~~~-----~~~~~~~L~V~~ 162 (163)
|.| |..+ ..+..+.|.|.|
T Consensus 172 C~a~n~~~~~~~s~~S~~~~l~V~G 196 (196)
T 3p2t_A 172 CFSSHGFSHYLLSHPSDPLELIVSG 196 (196)
T ss_dssp EEEECGGGTTEECCCCCCEEEEEC-
T ss_pred EEEEcCCCCcccCCCCCCEEEEeCC
Confidence 999 7653 567788999876
No 51
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.81 E-value=4.3e-19 Score=130.20 Aligned_cols=145 Identities=18% Similarity=0.250 Sum_probs=106.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+|.+..... ........|+... +.+|.|.+++.+|+|.|+|.+. ..+..+..+.|
T Consensus 232 l~C~~~g~p~p~v~W~~~~~~~~~---~~~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 302 (388)
T 2v5m_A 232 LLCPAQGFPAPSFRWYKFIEGTTR---KQAVVLNDRVKQV------SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVL 302 (388)
T ss_dssp ECCCCEEESCCEEEEEEECTTSSC---EEECCCSSSEEEE------TTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEecCCCCcc---cccccccCceecc------cCEEEECcCCHHHCeEEEEEEecCCCceeEEEEE
Confidence 579999989 99999985322111 1111223444432 2479999999999999999994 45556677778
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+. .....|.|.+++.+|+|.|+|.| |..
T Consensus 303 ~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 376 (388)
T 2v5m_A 303 TVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG------HSESVLRIESVKKEDKGMYQCFVRNDR 376 (388)
T ss_dssp EEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECS------CCSSEEEESSCCGGGCEEEEEEEECSS
T ss_pred EEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECc------cCCCEEEEecCChhhCEEEEEEEEcCC
Confidence 777652 33456778889999963 3456788998876432 12346999999999999999999 999
Q ss_pred CCccEEEEEEE
Q psy3125 150 PKMNMAIMLNV 160 (163)
Q Consensus 150 ~~~~~~~~L~V 160 (163)
|..+.++.|.|
T Consensus 377 G~~~~~~~l~V 387 (388)
T 2v5m_A 377 ESAEASAELKL 387 (388)
T ss_dssp CEEEEEEEEEE
T ss_pred CcEEEEEEEEe
Confidence 99999999987
No 52
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.80 E-value=5.6e-18 Score=114.62 Aligned_cols=148 Identities=12% Similarity=0.150 Sum_probs=101.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
|.|.+.|.| +.|.|+|..+..+ .++.... ....+|.|.+++.+|+|.|.|.+.+ .+..+..+.|
T Consensus 21 L~C~~~g~P~p~i~W~~~~~~~~----------~~~~~~~----~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 21 LTCSTTGCESPFFSWRTQIDSPL----------NGKVTNE----GTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EEEEEESCSSCEEEEEETTCCCC----------SSEEEEE----TTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEeecCCCCCeEEEECCCCCCc----------cceEEEc----CCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 689999999 9999987322111 1222211 2366799999999999999999944 4455677888
Q ss_pred EEEcCCCce------EeeCCCeEEEecCCC---Cc--eeEEEEeCCCeEEEecCCC--------CceEEEEecccCcCCC
Q psy3125 79 NVDDRGRGA------RLSAGPLLNFAFPDL---LT--TNIYTYTGDARFSVIHPQN--------SDEWNMKIDYAQKRDA 139 (163)
Q Consensus 79 ~V~~~~~~~------~v~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~--------~~~~~L~i~~v~~~D~ 139 (163)
.|..++..+ .+..|..+.+.|... +. ..+.|++++..+....... .....|.|..+..+|+
T Consensus 87 ~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~ 166 (202)
T 1vca_A 87 EIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166 (202)
T ss_dssp EEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTT
T ss_pred EEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCC
Confidence 888765433 356788899999742 21 3578998887554322111 1234578899999999
Q ss_pred eeEEEEc-CCCCC-------ccEEEEEEEec
Q psy3125 140 GIYECQV-NTEPK-------MNMAIMLNVDG 162 (163)
Q Consensus 140 G~Y~C~a-~~~~~-------~~~~~~L~V~~ 162 (163)
|.|+|+| |..+. .+..+.|+|..
T Consensus 167 g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y 197 (202)
T 1vca_A 167 KVLVCRAKLHIDEMDSVPTVRQAVKELQVYI 197 (202)
T ss_dssp CEEEEEEEECSCCCTTSCSEEEEEEECCEEC
T ss_pred CeEEEEEEccccCCCCcceeEeeEEEEEEec
Confidence 9999999 76554 34677887764
No 53
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.80 E-value=2.6e-19 Score=131.56 Aligned_cols=146 Identities=14% Similarity=0.228 Sum_probs=104.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe-eEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM-NMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~-~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+.. ....|+.... .....+|.|.+++.+|+|.|+|.+.+ .+.. +..+.
T Consensus 232 l~C~~~g~p~~~i~W~~--~g~~~~~-----~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~ 302 (395)
T 1bih_A 232 IYCMYGSNPMGYPNYFK--NGKDVNG-----NPEDRITRHN--RTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLK 302 (395)
T ss_dssp EEEEEECSSCCCCEEEE--TTEECCC-----CTTSSEESCS--SSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEE
T ss_pred EEEEeccCCCCeEEEEE--CCEEcCC-----CCceeEEEEe--cCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEE
Confidence 579999999 9999998 3322211 1123333221 22345799999999999999999944 3443 33777
Q ss_pred EEEEcCC------Cc-eEeeCCCeEEEecCC--CCceeEEEEeCCCeE-----EEecCCCCceEEEEecccCcCCCeeEE
Q psy3125 78 LNVDDRG------RG-ARLSAGPLLNFAFPD--LLTTNIYTYTGDARF-----SVIHPQNSDEWNMKIDYAQKRDAGIYE 143 (163)
Q Consensus 78 l~V~~~~------~~-~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 143 (163)
|.|..++ .. ..+..|..+.+.|.. .+.+.+.|++++..+ .+.. ..|.|.+++.+|+|.|+
T Consensus 303 l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~ 376 (395)
T 1bih_A 303 LTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTD------SGLVIKGVKNGDKGYYG 376 (395)
T ss_dssp EEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEET------TEEEESSCCSTTCEEEE
T ss_pred EEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEEC------CEEEEeeCCcccCEEEE
Confidence 8776542 22 567788889999963 345678999876532 2221 26999999999999999
Q ss_pred EEc-CCCCCccEEEEEEEe
Q psy3125 144 CQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 144 C~a-~~~~~~~~~~~L~V~ 161 (163)
|.| |..|..+..+.|.|.
T Consensus 377 C~a~N~~G~~~~~~~l~V~ 395 (395)
T 1bih_A 377 CRATNEHGDKYFETLVQVN 395 (395)
T ss_dssp EEEEETTEEEEEEEEEEEC
T ss_pred EEEEccCCCceEEEEEEEC
Confidence 999 999999999999883
No 54
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.80 E-value=1.5e-18 Score=119.60 Aligned_cols=146 Identities=13% Similarity=0.235 Sum_probs=94.9
Q ss_pred CceEEecCC-CcEEEEEecCCe---eE-Eecce----EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH---IL-TTNIY----TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP- 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~---~~-~~~~~----~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~- 70 (163)
|.|. .+.+ +.|.|+|.+... .+ ..... .....+|+.+.. .....++|.|.+++.+|+|.|+|.+.+..
T Consensus 20 L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 20 LSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASR-PSQENFSLILELATPSQTSVYFCASGDLGQ 97 (238)
T ss_dssp EEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEEC-CSSSBCEEEESSCCGGGCEEEEEEEEC---
T ss_pred EEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEc-cCCceEEEEEecCCcccCeeEEEEEEeCCC
Confidence 6799 6777 999999953221 11 11000 011246887765 23457889999999999999999995431
Q ss_pred ---C--eeEEEEEEEEcCC------------------CceEeeCCCeEEEecCC--CCceeEEEEeCC------------
Q psy3125 71 ---K--MNMAIMLNVDDRG------------------RGARLSAGPLLNFAFPD--LLTTNIYTYTGD------------ 113 (163)
Q Consensus 71 ---~--~~~~~~l~V~~~~------------------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~------------ 113 (163)
. ....+.|.|...+ ....+..|..+.+.|.. .+.+.+.|++..
T Consensus 98 ~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~ 177 (238)
T 2p1y_A 98 TNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISIL 177 (238)
T ss_dssp ---CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEE
T ss_pred ccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEc
Confidence 1 1234567775432 22356788999999964 334678888753
Q ss_pred --------CeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 114 --------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 114 --------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
.|+.+..........|.|.+++.+|+|.|+|.| |.
T Consensus 178 ~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 178 SVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDT 221 (238)
T ss_dssp TTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEET
T ss_pred cCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeC
Confidence 122222112234568999999999999999999 65
No 55
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.80 E-value=6.1e-18 Score=115.21 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=105.1
Q ss_pred CceEEecCC------CcEEEEEecCCeeEEecceE-e------cCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEe
Q psy3125 1 MACTVMGLG------RPVSWMRKRDLHILTTNIYT-Y------TGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQV 66 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~~~~~~~~~~-~------~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~ 66 (163)
|.|.+.+.| ..|.|+|.+ ..+....... . ...+|+.+.... ..++.+|.|.+++.+|+|.|+|++
T Consensus 21 L~C~~~~~p~~~~~~~~v~W~~~~-~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 99 (222)
T 3sbw_C 21 IECKFPVEKQLDLAALIVYWEMED-KNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMI 99 (222)
T ss_dssp EEEECCCCSSCCTTTCEEEEEETT-EEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGCEEEEEEE
T ss_pred EEeEecCCCCCCCccEEEEEEECC-cEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccCeEEEEEE
Confidence 679987665 379999843 2222221111 1 113577765421 235789999999999999999999
Q ss_pred eCCCCeeEEEEEEEEcCCCce------EeeCCCeEEEecCC--CCceeEEEEeCCCeEEE-------ecCCCCceEEEEe
Q psy3125 67 NTEPKMNMAIMLNVDDRGRGA------RLSAGPLLNFAFPD--LLTTNIYTYTGDARFSV-------IHPQNSDEWNMKI 131 (163)
Q Consensus 67 ~~~~~~~~~~~l~V~~~~~~~------~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~~L~i 131 (163)
.+.+.....+.|.|..++..+ .+..|..+.+.|.. .+.+.+.|+.+++.... ..........+.+
T Consensus 100 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 179 (222)
T 3sbw_C 100 SYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTST 179 (222)
T ss_dssp ESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEE
T ss_pred EeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEE
Confidence 765666777889998765332 33567888999963 45578899987443211 1111111111222
Q ss_pred cccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 132 DYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 132 ~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
-.++.+|+|.|+|.| |..+.....+.|.|.+
T Consensus 180 l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 180 LRINTTTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp EEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEeccCCcEEEEEEEeCccceeeEEEEEecC
Confidence 345678999999999 9999999999998864
No 56
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.80 E-value=8.2e-19 Score=124.85 Aligned_cols=151 Identities=17% Similarity=0.235 Sum_probs=109.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ....++.+... ..+..+|.|.+++.+|+|.|+|.+ +..+..+..+.|
T Consensus 24 l~C~~~g~p~~~v~W~~--~~~~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (305)
T 2nzi_A 24 LVCKVTGHPKPIVKWYR--QGKEII------ADGLKYRIQEF-KGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASL 94 (305)
T ss_dssp EEEEEECSSCCEEEEEE--TTEECC------CCSSSEEEEEE-TTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeCCCCCeEEEEE--CCEEcc------cCCCeEEEEEC-CCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEE
Confidence 689999999 9999998 322221 12346655432 234678999999999999999999 444555667777
Q ss_pred EEEcCC-----------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeE------EEecCCCCceEEEEecc-cCcCC
Q psy3125 79 NVDDRG-----------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARF------SVIHPQNSDEWNMKIDY-AQKRD 138 (163)
Q Consensus 79 ~V~~~~-----------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i~~-v~~~D 138 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+ .+.. ......|.|.+ ++.+|
T Consensus 95 ~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~~d 172 (305)
T 2nzi_A 95 EVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIV--TRSFTSLVFPNGVERKD 172 (305)
T ss_dssp EECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEE--CSSEEEEEETTCCCSTT
T ss_pred EEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEE--cCCceEEEEecCCccCc
Confidence 776432 23456678889999863 345678898876533 2221 12356799999 99999
Q ss_pred CeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 139 AGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 139 ~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
+|.|+|.| |..|..+..+.|.|.+
T Consensus 173 ~G~Y~C~a~N~~G~~~~~~~l~v~~ 197 (305)
T 2nzi_A 173 AGFYVVCAKNRFGIDQKTVELDVAD 197 (305)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred cEEEEEEEEeCCCceeeEEEEEEec
Confidence 99999999 8889999999998865
No 57
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.80 E-value=1.4e-18 Score=117.89 Aligned_cols=158 Identities=15% Similarity=0.201 Sum_probs=104.4
Q ss_pred CceEEecC-------C-CcEEEEEecCC----eeEEecc----eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEE
Q psy3125 1 MACTVMGL-------G-RPVSWMRKRDL----HILTTNI----YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 64 (163)
Q Consensus 1 l~C~~~~~-------~-~~v~W~k~~~~----~~~~~~~----~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 64 (163)
|+|.+.+. + +.|.|+|.+.. .++.... ......+|+.+..+...++++|.|.+++.+|+|.|.|
T Consensus 20 L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 99 (214)
T 2zg1_A 20 VPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFF 99 (214)
T ss_dssp ECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEE
T ss_pred EeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCHhhCceEEE
Confidence 67998865 5 88999985432 1222111 0112347888775433457789999999999999999
Q ss_pred EeeCCCC--e---eEEEEEEEEcCCCce------EeeCCCeEEEecCCC------CceeEEEEeCCCeEEEecCCCCceE
Q psy3125 65 QVNTEPK--M---NMAIMLNVDDRGRGA------RLSAGPLLNFAFPDL------LTTNIYTYTGDARFSVIHPQNSDEW 127 (163)
Q Consensus 65 ~~~~~~~--~---~~~~~l~V~~~~~~~------~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (163)
++.+... . ...+.|.|...+..+ .+..|..+.+.|... +.+.+.|++++.... ........
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~--~~~~~~~~ 177 (214)
T 2zg1_A 100 RVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPL--DPETTRSS 177 (214)
T ss_dssp EEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSS--CSSCCCSS
T ss_pred EEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccC--CCCceeEE
Confidence 9955431 1 246778887653222 244678899999752 457889998865321 11123456
Q ss_pred EEEecccCcCCCeeEEEEc-CCCC--CccEEEEEEE
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEP--KMNMAIMLNV 160 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~--~~~~~~~L~V 160 (163)
.|.|..+..+|+|.|+|.| |..+ ..+..+.|+|
T Consensus 178 ~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 178 ELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp EEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred EEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 7999999999999999999 7543 4556666655
No 58
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.80 E-value=2.7e-18 Score=119.83 Aligned_cols=159 Identities=16% Similarity=0.271 Sum_probs=99.5
Q ss_pred CceEEecC--C-CcEEEEEecCCe---eE-E--ecc-eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLH---IL-T--TNI-YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~---~~-~--~~~-~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + +.|.|+|.+... .+ . .+. ... ...+|+.+......+.++|.|.+++.+|+|.|+|++.+
T Consensus 28 L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n 107 (257)
T 3gkz_A 28 LTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFD 107 (257)
T ss_dssp EEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhCEEEEEEEec
Confidence 68999984 4 899999954221 11 0 000 011 12468888764345688999999999999999999955
Q ss_pred C-----CCeeEEEEEEEEcC--------------------CCceEeeCCCeEEEecCC--CCce-eEEEEeC--CC----
Q psy3125 69 E-----PKMNMAIMLNVDDR--------------------GRGARLSAGPLLNFAFPD--LLTT-NIYTYTG--DA---- 114 (163)
Q Consensus 69 ~-----~~~~~~~~l~V~~~--------------------~~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~--~~---- 114 (163)
. ......+.|.|..+ +....+..|..+.+.|.. .... .+.|++. +.
T Consensus 108 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~ 187 (257)
T 3gkz_A 108 SDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKL 187 (257)
T ss_dssp TTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEE
T ss_pred CCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEE
Confidence 3 11233455666543 122456678899999963 2333 7889863 21
Q ss_pred --------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC-CCccEEEEEEEe
Q psy3125 115 --------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE-PKMNMAIMLNVD 161 (163)
Q Consensus 115 --------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~-~~~~~~~~L~V~ 161 (163)
|+.+.. ......|.|.+++.+|+|.|+|.| +.. .....-..|.|.
T Consensus 188 ~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 188 WIYSTSNLASGVPARFSGSG--SGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp EEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEccccCCCcCCCEEEec--CCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEE
Confidence 111111 123557999999999999999999 432 222344556654
No 59
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.80 E-value=7.8e-19 Score=122.47 Aligned_cols=146 Identities=18% Similarity=0.270 Sum_probs=94.8
Q ss_pred CceEEecC--C-CcEEEEEecCC---eeEEecce--EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---HILTTNIY--TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-- 70 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-- 70 (163)
|.|.+.+. + +.|.|+|.+.. ..+..... .....+||.+.. ....++|.|.+++.+|+|.|+|.+.+..
T Consensus 22 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~ 99 (256)
T 3ux9_B 22 ISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK--SGTSASLAITGLQSEDEADYYCQVRDNNEN 99 (256)
T ss_dssp EEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEETTTT
T ss_pred EEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc--cCCEEEEEECCCChhhCEEEEEEEEECCCC
Confidence 68999987 6 99999985422 12211111 111346888765 3467899999999999999999995421
Q ss_pred --CeeEEEEEEEEcCC--------------------------CceEeeCCCeEEEecCCC--C--ceeEEEEeCC--C--
Q psy3125 71 --KMNMAIMLNVDDRG--------------------------RGARLSAGPLLNFAFPDL--L--TTNIYTYTGD--A-- 114 (163)
Q Consensus 71 --~~~~~~~l~V~~~~--------------------------~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~~--~-- 114 (163)
.....+.|.|..++ +...+..|..+.+.|... . ...+.|++.. .
T Consensus 100 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~ 179 (256)
T 3ux9_B 100 EWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGL 179 (256)
T ss_dssp EEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCE
T ss_pred ceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCc
Confidence 22234456655432 122466788899999642 2 5678888652 1
Q ss_pred ---------------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 115 ---------------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 115 ---------------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
|+.+..........|+|.+++.+|+|.|+|.| +.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 180 EWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYID 235 (256)
T ss_dssp EEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcC
Confidence 33333222244667999999999999999999 53
No 60
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.80 E-value=6.4e-18 Score=130.09 Aligned_cols=162 Identities=15% Similarity=0.212 Sum_probs=112.6
Q ss_pred CceEEecCC----CcEEEEEecCC----eeEEecce-EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCC
Q psy3125 1 MACTVMGLG----RPVSWMRKRDL----HILTTNIY-TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP 70 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~----~~~~~~~~-~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~ 70 (163)
|.|.+.+.+ ..|.|+|.+.. .++..... .....+|+.+......+.++|.|.+++.+|+|.|+|.+ +..+
T Consensus 20 L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~ 99 (585)
T 2ocw_A 20 ITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSR 99 (585)
T ss_pred EEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCC
Confidence 689999886 38999985332 12221111 11124688877543455788999999999999999999 4444
Q ss_pred CeeEEEEEEEEcCC------CceEeeCCCeEEEecCCC---CceeEEEEeCCCe-------------------EEEec-C
Q psy3125 71 KMNMAIMLNVDDRG------RGARLSAGPLLNFAFPDL---LTTNIYTYTGDAR-------------------FSVIH-P 121 (163)
Q Consensus 71 ~~~~~~~l~V~~~~------~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------------~~~~~-~ 121 (163)
..+..+.|.|..++ ....+..|..+.+.|... +...+.|++++.. +.+.. .
T Consensus 100 ~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 179 (585)
T 2ocw_A 100 GLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQG 179 (585)
T ss_pred CceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEecc
Confidence 56677888887653 334577888999999643 2356889887642 22211 1
Q ss_pred CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 122 QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 122 ~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.......|.|.+++.+|+|.|+|.| |..+..+..+.|.|..
T Consensus 180 ~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 221 (585)
T 2ocw_A 180 TGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLK 221 (585)
T ss_pred CCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEcc
Confidence 1122347999999999999999999 8888888899988864
No 61
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.80 E-value=7e-18 Score=113.94 Aligned_cols=161 Identities=15% Similarity=0.114 Sum_probs=101.4
Q ss_pred CceEEecCC-C---cEEEEEecCCeeEE-----e-cceE-e--cCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEe
Q psy3125 1 MACTVMGLG-R---PVSWMRKRDLHILT-----T-NIYT-Y--TGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQV 66 (163)
Q Consensus 1 l~C~~~~~~-~---~v~W~k~~~~~~~~-----~-~~~~-~--~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~ 66 (163)
|+|.+.+.+ + .|.|+|.+...... . .... . ...+|+.+.... ...+++|.|.+++.+|+|.|.|.+
T Consensus 19 L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~ 98 (218)
T 4frw_A 19 LPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRV 98 (218)
T ss_dssp ECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGGGCEEEEEEE
T ss_pred EEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHHHCCceeEEE
Confidence 689999887 4 48999854322111 0 0000 0 113455544321 234778999999999999999999
Q ss_pred eCC-C-CeeEEEEEEEEcCCC-------ceEeeCCCeEEEecC--CCCceeEEEEeCCCeEEEecC-----CCCceEEEE
Q psy3125 67 NTE-P-KMNMAIMLNVDDRGR-------GARLSAGPLLNFAFP--DLLTTNIYTYTGDARFSVIHP-----QNSDEWNMK 130 (163)
Q Consensus 67 ~~~-~-~~~~~~~l~V~~~~~-------~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~ 130 (163)
.+. . .......+.+..++. ...+..+..+.+.|. ..+.+.+.|++++........ .....+.|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~ 178 (218)
T 4frw_A 99 STFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFH 178 (218)
T ss_dssp EEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEE
T ss_pred EeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEE
Confidence 542 2 223333444444322 223344566777775 345578999988775543221 112245799
Q ss_pred ecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 131 IDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
|.+++.+|+|.|+|.| |..+..+..+.|.|.
T Consensus 179 i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 179 LVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp ECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred EeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 9999999999999999 888888777776654
No 62
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=3.6e-18 Score=120.98 Aligned_cols=159 Identities=14% Similarity=0.242 Sum_probs=102.2
Q ss_pred CceEEecCC---CcEEEEEecCCe---eEEe-c---ce-Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---ILTT-N---IY-TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~~~-~---~~-~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+... .+.. . .. .. ...+|+.+..+...+..+|.|.+++.+|+|.|+|.+.
T Consensus 46 L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 125 (282)
T 1qok_A 46 LSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEG 125 (282)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhhCEEEEEEec
Confidence 689999874 899999964321 1111 0 00 00 1246888876434467899999999999999999995
Q ss_pred CCC----C--eeEEEEEEEEcCC---------------------CceEeeCCCeEEEecCC--CCceeEEEEe--CCCeE
Q psy3125 68 TEP----K--MNMAIMLNVDDRG---------------------RGARLSAGPLLNFAFPD--LLTTNIYTYT--GDARF 116 (163)
Q Consensus 68 ~~~----~--~~~~~~l~V~~~~---------------------~~~~v~~~~~~~~~~~~--~~~~~~~~~~--~~~~~ 116 (163)
+.. . ....+.|.|..++ ....+..|..+.+.|.. .+ ..+.|++ ++...
T Consensus 126 n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~ 204 (282)
T 1qok_A 126 TPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSP 204 (282)
T ss_dssp CSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCC
T ss_pred cCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCc
Confidence 432 1 2234567776532 12346678889999963 23 6788987 33322
Q ss_pred ------------------EEecCCCCceEEEEecccCcCCCeeEEEEc-CCC-CCccEEEEEEEec
Q psy3125 117 ------------------SVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE-PKMNMAIMLNVDG 162 (163)
Q Consensus 117 ------------------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~-~~~~~~~~L~V~~ 162 (163)
.+.. ......|.|.+++.+|+|.|+|.| +.. ......+.|.|.+
T Consensus 205 ~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 205 KLWIYSTSNLASGVPARFSGSG--SGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEEEecCCCCcccCCeEEec--CCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 1111 123567999999999999999999 532 2334556777764
No 63
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.80 E-value=2.5e-19 Score=121.57 Aligned_cols=155 Identities=11% Similarity=0.086 Sum_probs=101.2
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEe-cce-EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-C---
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTT-NIY-TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-P--- 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~-~~~-~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~--- 70 (163)
|.|.+.+.+ +.|.|+|.+.. ..+.. ... .....+||.+.. ..++.+|.|.+++.+|+|.|.|++.+. +
T Consensus 20 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 97 (213)
T 3mj8_L 20 ITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN--SGNMATLTISKAQAGDEADYYCQSWDGTNSAW 97 (213)
T ss_dssp EEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEETTTTEE
T ss_pred EEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe--cCCEEEEEECCCChhhCEEEEEEeccCCccee
Confidence 689999888 99999985321 11111 111 111346888765 346889999999999999999999543 3
Q ss_pred CeeEEEEEEEEcCC---CceEee-------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe-------cCCC--CceE
Q psy3125 71 KMNMAIMLNVDDRG---RGARLS-------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI-------HPQN--SDEW 127 (163)
Q Consensus 71 ~~~~~~~l~V~~~~---~~~~v~-------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~-------~~~~--~~~~ 127 (163)
.....+.|.|...+ +.+.+. .|..+.+.|... +. ..+.|++++..+... .... ....
T Consensus 98 ~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s 177 (213)
T 3mj8_L 98 VFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATS 177 (213)
T ss_dssp EEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEE
T ss_pred EEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEE
Confidence 34556778887321 122222 478899999632 22 478899877644210 0001 1234
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
.|.|.+++.+|+|.|+|.| |..+.....+.
T Consensus 178 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 178 YLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred EEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 5999999999999999999 77665555543
No 64
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.80 E-value=9.4e-19 Score=122.37 Aligned_cols=146 Identities=14% Similarity=0.199 Sum_probs=88.4
Q ss_pred CceEEecCC-CcEEEEEecC---CeeEEecc-----eEecC--CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRD---LHILTTNI-----YTYTG--DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~---~~~~~~~~-----~~~~~--~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|... ...+.... ..... .+|+........+.++|.|.+++.+|+|.|+|.+.+.
T Consensus 22 L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 101 (259)
T 3omz_A 22 ITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSGVYYCATWDQ 101 (259)
T ss_dssp EECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCEEEEEEEECT
T ss_pred EEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCEEEEEEEeeC
Confidence 689999998 9999998532 11121111 00111 1233333333456788999999999999999999543
Q ss_pred C----CeeEEEEEEEEcC-----------------------CCceEeeCCCeEEEecCCC---CceeEEEEeCCC-----
Q psy3125 70 P----KMNMAIMLNVDDR-----------------------GRGARLSAGPLLNFAFPDL---LTTNIYTYTGDA----- 114 (163)
Q Consensus 70 ~----~~~~~~~l~V~~~-----------------------~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~----- 114 (163)
. .....+.|.|... +....+..|..+.+.|... +...+.|++...
T Consensus 102 ~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~ 181 (259)
T 3omz_A 102 NYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMI 181 (259)
T ss_dssp TSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEE
T ss_pred CccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcE
Confidence 2 2334455666542 2335677888999999532 456788886431
Q ss_pred ---------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 115 ---------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 115 ---------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
|+.+..........|.|.+++.+|+|.|+|.|
T Consensus 182 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 228 (259)
T 3omz_A 182 FLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCAL 228 (259)
T ss_dssp EEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEE
T ss_pred EEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEE
Confidence 22222112223456999999999999999999
No 65
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.79 E-value=4.5e-19 Score=119.28 Aligned_cols=150 Identities=10% Similarity=0.041 Sum_probs=97.4
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC----CeeEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP----KMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~----~~~~~~ 76 (163)
|.|.+.+.+..+.|+|. +..+.... ...+ . .....+|.|.+++.+|+|.|+|.+.+.. ..+..+
T Consensus 24 L~C~~~~~~~~~~W~k~--g~~~~~~~----~~~~---~---~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~ 91 (198)
T 1ugn_A 24 LRCQGGQETQEYRLYRE--KKTAPWIT----RIPQ---E---LVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPL 91 (198)
T ss_dssp EEEECCTTCCCEEEEES--SSCCHHHH----TSCH---H---HHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCE
T ss_pred EEEEecCCCcEEEEEEC--Cccccccc----cccc---c---CCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccE
Confidence 67999988877999983 22211000 0000 0 1134579999999999999999995432 335567
Q ss_pred EEEEEcCC--------CceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEec------CCCCceEEEEecccCcCCCee
Q psy3125 77 MLNVDDRG--------RGARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIH------PQNSDEWNMKIDYAQKRDAGI 141 (163)
Q Consensus 77 ~l~V~~~~--------~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~L~i~~v~~~D~G~ 141 (163)
.|.|.... +...+..|..+.+.|... ....+.|++++....... ........|.|.+++.+|+|.
T Consensus 92 ~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 171 (198)
T 1ugn_A 92 ELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWW 171 (198)
T ss_dssp EEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSCCSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEE
T ss_pred EEEEcccccCCccccCCccccCCCCcEEEEEecCCCCcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeE
Confidence 78887631 123566788899999643 246788988876542111 111235789999999999999
Q ss_pred EEEEc-CCCC-----CccEEEEEEEec
Q psy3125 142 YECQV-NTEP-----KMNMAIMLNVDG 162 (163)
Q Consensus 142 Y~C~a-~~~~-----~~~~~~~L~V~~ 162 (163)
|+|.| |..+ ..+..+.|.|.|
T Consensus 172 Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (198)
T 1ugn_A 172 YRCYAYDSNSPYEWSLPSDLLELLVLG 198 (198)
T ss_dssp EEEEEECTTSTTEECCCCCCEEEEEEC
T ss_pred EEEEEEeCCCCccccCcCceEEEEecC
Confidence 99999 6643 337889999876
No 66
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.79 E-value=3.1e-19 Score=122.21 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=96.2
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeE--EEEEcccCcCCCeeEEEEeeCCC---CeeEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEW--NMKIDYAQKRDAGIYECQVNTEP---KMNMA 75 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~~~~~~---~~~~~ 75 (163)
|.|.+.+.++.+.|+|.+.. +.. . ..+. .. ..+.. +|.|.+++.+|+|.|+|.+.+.. ..+..
T Consensus 28 L~C~~~~~~~~~~W~k~g~~-~~~-~------~~~~--~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~ 95 (218)
T 1uct_A 28 IQCQAIREAYLTQLMIIKNS-TYR-E------IGRR--LK--FWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDT 95 (218)
T ss_dssp EEECCCTTCSEEEEEEEETT-EEE-E------CSEE--CC------CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCC
T ss_pred EEEEcCCCCCEEEEEECCCc-ccc-c------cccc--CC--CCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCC
Confidence 57998874489999984322 111 1 0111 10 11234 79999999999999999995432 23445
Q ss_pred EEEEEEcCC--------CceEeeCCCeEEEec-CCC-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEE
Q psy3125 76 IMLNVDDRG--------RGARLSAGPLLNFAF-PDL-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 76 ~~l~V~~~~--------~~~~v~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
+.|.|.... +...+..|..+.+.| ... +.....|++++..+............|.|.+++.+|+|.|+|.
T Consensus 96 ~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 175 (218)
T 1uct_A 96 LELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCY 175 (218)
T ss_dssp EEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEEEEEE
T ss_pred EEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCcccCEEEEEE
Confidence 677776521 123566788899999 432 3356788887654321111123456799999999999999999
Q ss_pred c-CCC-----CCccEEEEEEEecC
Q psy3125 146 V-NTE-----PKMNMAIMLNVDGK 163 (163)
Q Consensus 146 a-~~~-----~~~~~~~~L~V~~~ 163 (163)
| +.. ...+..+.|.|.|+
T Consensus 176 a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 176 GWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp EECTTSTTEECCCCCCEEEEEC--
T ss_pred EEcCCCCCcCCCCCCcEEEEEecC
Confidence 9 542 25577899999874
No 67
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.79 E-value=7.1e-19 Score=119.25 Aligned_cols=138 Identities=17% Similarity=0.345 Sum_probs=92.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+ | +.|.|+| ++..+... . ..+.+|.|.+++.+|+|.|+|.+++.... .+.|.
T Consensus 23 L~C~~---p~~~i~W~k--~g~~l~~~------------~----~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~--~~~v~ 79 (204)
T 1sy6_A 23 LTCDA---EAKNITWFK--DGKMIGFL------------T----EDKKKWNLGSNAKDPRGMYQCKGSQNKSK--PLQVY 79 (204)
T ss_dssp EEECS---CSSEEEEEE--TTEEEEEE------------E----SSCCCEEEEEGGGCCEEEEEEESSSSCCC--CEEEE
T ss_pred EEEcC---CCCEEEEEE--CCEECCCC------------C----CCCCeEEeCCCCcCCCEEEEEEecCCCCe--eEEEE
Confidence 57888 6 9999998 33333211 0 12346999999999999999998543322 23344
Q ss_pred EE---------------------------c----C----CCceEee-CCCeEEEecCCCCceeEEEEeCCCeEEEecCCC
Q psy3125 80 VD---------------------------D----R----GRGARLS-AGPLLNFAFPDLLTTNIYTYTGDARFSVIHPQN 123 (163)
Q Consensus 80 V~---------------------------~----~----~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (163)
|. . . .....+. .|..+.+.|...+.+.+.|++++..+.......
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g~p~p~i~W~k~~~~l~~~~~~~ 159 (204)
T 1sy6_A 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDK 159 (204)
T ss_dssp EEC------------------------------------CCCCEEEEETTEEEEECSCCCSSCEEEEETTEEESCCTTCT
T ss_pred EEEeccccccccccccccccccccccccccccccccceecCCceeeecCCcEEEEcCCCCCCceEEEECCEECCCccCCc
Confidence 33 0 0 0111233 788999999976677889998876543221110
Q ss_pred ---CceEEEEeccc-CcCCCeeEEEEc-CCCCC-ccEEEEEEEe
Q psy3125 124 ---SDEWNMKIDYA-QKRDAGIYECQV-NTEPK-MNMAIMLNVD 161 (163)
Q Consensus 124 ---~~~~~L~i~~v-~~~D~G~Y~C~a-~~~~~-~~~~~~L~V~ 161 (163)
.....|.|.++ +.+|+|.|+|.| |..+. .+..++|+|+
T Consensus 160 ~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 160 NIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp TEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred eEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 12456999999 999999999999 77775 4677787775
No 68
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.79 E-value=9.2e-19 Score=130.72 Aligned_cols=152 Identities=13% Similarity=0.207 Sum_probs=100.1
Q ss_pred CceEEec-CC-CcEEEEEecCCeeEEecce----EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeE
Q psy3125 1 MACTVMG-LG-RPVSWMRKRDLHILTTNIY----TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNM 74 (163)
Q Consensus 1 l~C~~~~-~~-~~v~W~k~~~~~~~~~~~~----~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 74 (163)
|.|.+.+ .| +.|.|+|. +..+..+.. .+. ..+.. ....+|.|.+++.+|+|.|+|.+.+. .+.
T Consensus 247 L~C~~~g~~p~p~i~W~k~--g~~l~~~~~~~~~~~~-~~~~~------~~~~~L~I~~v~~~D~G~Y~C~A~N~--~~~ 315 (423)
T 3qs7_E 247 IRCKAVHVNHGFGLTWELE--NKALEEGNYFEMSTYS-TNRTM------IRILFAFVSSVARNDTGYYTCSSSKH--PSQ 315 (423)
T ss_dssp EEEEEEESSSCCCEEEEES--SSBCCGGGEEEEEEEE-TTTEE------EEEEEEEESSCCTTTCEEEEEEETTE--EEE
T ss_pred EEEEEEcCCCCcEEEEEEC--CEEccccceeeccccc-CCcee------EEEEEEEEeecCHHHCEEEEEEEecC--CCc
Confidence 6899998 66 99999983 222211100 000 11111 12457999999999999999999655 777
Q ss_pred EEEEEEEcCCC--------ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEE
Q psy3125 75 AIMLNVDDRGR--------GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 75 ~~~l~V~~~~~--------~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.+.|.|.+++. ...+..|..+.+.|.. .+.+.+.|++++..+............+.+.....+|+|.|+|
T Consensus 316 ~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC 395 (423)
T 3qs7_E 316 SALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIF 395 (423)
T ss_dssp EEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEE
T ss_pred eEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEecccccCEEEEE
Confidence 78888876532 2335567788888863 3557899999887664332101112223336677899999999
Q ss_pred Ec-CCCCCccEEEEEEEecC
Q psy3125 145 QV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~~ 163 (163)
.| |..|..+.++.|.|.++
T Consensus 396 ~A~N~~G~~~~s~~L~v~~~ 415 (423)
T 3qs7_E 396 HAENDDAQFTKMFTLNIRSG 415 (423)
T ss_dssp EEEETTEEEEEEEEEC----
T ss_pred EEEcCCceEEEEEEEEEecC
Confidence 99 99999999999999864
No 69
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=3.2e-19 Score=128.57 Aligned_cols=152 Identities=18% Similarity=0.299 Sum_probs=105.4
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ...++.... ......+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 143 l~C~~~g~p~~~v~W~~--~~~~~~-------~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 212 (334)
T 1ry7_B 143 FRCPAAGNPTPSISWLK--NGREFR-------GEHRIGGIK-LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 212 (334)
T ss_dssp EECCCCCSSCCEEECCB--TTBCCC-------TTSSTTCCC-CCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCCCeEEEEE--CCEECc-------cccccccee-cccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEE
Confidence 579999999 9999998 222221 112211110 11245689999999999999999994 44556677788
Q ss_pred EEEcCC-----------CceEeeCCCeEEEecCC--CCceeEEEEe----CCCeEEE--------ecCC-----CCceEE
Q psy3125 79 NVDDRG-----------RGARLSAGPLLNFAFPD--LLTTNIYTYT----GDARFSV--------IHPQ-----NSDEWN 128 (163)
Q Consensus 79 ~V~~~~-----------~~~~v~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~--------~~~~-----~~~~~~ 128 (163)
.|...+ ....+..|..+.+.|.. .+.+.+.|++ ++..+.. .... ......
T Consensus 213 ~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (334)
T 1ry7_B 213 DVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEV 292 (334)
T ss_dssp EEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCC
T ss_pred EEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccE
Confidence 887631 23456678889999974 4556889988 3332211 1100 111236
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|.|.+++.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 293 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 327 (334)
T 1ry7_B 293 LSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLP 327 (334)
T ss_dssp EEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEEC
T ss_pred EEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEE
Confidence 999999999999999999 9999999999999975
No 70
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.79 E-value=3.2e-18 Score=118.76 Aligned_cols=146 Identities=15% Similarity=0.234 Sum_probs=93.9
Q ss_pred CceEEecCC------CcEEEEEecCCe---eEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG------RPVSWMRKRDLH---ILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~~---~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.+... .+........ ..+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+.
T Consensus 21 L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~ 98 (247)
T 1svz_A 21 ISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG--SGTDFTLKISRVEAEDLGIYYCFQGSH 98 (247)
T ss_dssp EEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred EEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc--CCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 679998775 789999864321 1211111111 246888764 346789999999999999999999553
Q ss_pred CC--eeEEEEEEEEcCC-------------------CceEeeCCCeEEEecCCC----CceeEEEEeCC-----------
Q psy3125 70 PK--MNMAIMLNVDDRG-------------------RGARLSAGPLLNFAFPDL----LTTNIYTYTGD----------- 113 (163)
Q Consensus 70 ~~--~~~~~~l~V~~~~-------------------~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~----------- 113 (163)
.. ....+.|.|..++ +...+..|..+.+.|... ....+.|++..
T Consensus 99 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~ 178 (247)
T 1svz_A 99 FPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWI 178 (247)
T ss_dssp SSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEE
T ss_pred CccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEE
Confidence 22 2234556665431 223466788899999642 23578898752
Q ss_pred --------------CeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 114 --------------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 114 --------------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
.|+.+..........|.|.+++.+|+|.|+|.| |.
T Consensus 179 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 179 NTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 122222111223468999999999999999999 53
No 71
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.79 E-value=3.8e-19 Score=136.12 Aligned_cols=151 Identities=11% Similarity=0.180 Sum_probs=102.0
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEE---eccC-CCCeEEEEEcccCcCCCeeEEEEeeCCCCeeE
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSV---IHPQ-NSDEWNMKIDYAQKRDAGIYECQVNTEPKMNM 74 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~---~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 74 (163)
|.|.+. +.| +.|.|+|. +..+..+ .++.. .... .....+|.|.+++.+|+|.|+|.+.+. .+.
T Consensus 247 L~C~~~~g~p~p~i~W~k~--g~~l~~~-------~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~--~~~ 315 (527)
T 3qs9_E 247 IRCKAVHVNHGFGLTWELE--NKALEEG-------NYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH--PSQ 315 (527)
T ss_dssp EEEEEEESSSCCCEEEECS--SSCCCGG-------GEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE--EEE
T ss_pred EEEEEccCCCCeEEEEEEC--CEECCCC-------ceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC--CCc
Confidence 689997 888 99999983 2222111 11111 0000 012456999999999999999999654 666
Q ss_pred EEEEEEEcCC--------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEE
Q psy3125 75 AIMLNVDDRG--------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 75 ~~~l~V~~~~--------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.+.|.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+............|.|.+++.+|+|.|+|
T Consensus 316 ~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC 395 (527)
T 3qs9_E 316 SALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIF 395 (527)
T ss_dssp EEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEE
T ss_pred eEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEE
Confidence 7778876543 12345567778888853 3456789998877654332222234569999999999999999
Q ss_pred Ec-CCCCCccEEEEEEEec
Q psy3125 145 QV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~ 162 (163)
.| |..|..+..+.|.|..
T Consensus 396 ~A~N~~g~~~~~~~L~V~~ 414 (527)
T 3qs9_E 396 HAENDDAQFTKMFTLNIRR 414 (527)
T ss_dssp EEEETTEEEEEEEEEC--C
T ss_pred EEEeCCCcEEEEEEEEEec
Confidence 99 9889999999998864
No 72
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.79 E-value=4.7e-18 Score=116.44 Aligned_cols=161 Identities=9% Similarity=0.079 Sum_probs=97.3
Q ss_pred CceEEecCC----CcEEEEEecCCeeEE-e-cceEec------CCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLHILT-T-NIYTYT------GDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~~~~-~-~~~~~~------~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.+ ..|.|+|.+....+. . ++.... ...|+...... ..++++|.|.+++.+|+|.|+|.+.
T Consensus 24 L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 103 (226)
T 4f80_A 24 LPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQ 103 (226)
T ss_dssp EEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHCeeEEEEEE
Confidence 689998766 369999854333221 1 111111 12455554321 2357899999999999999999995
Q ss_pred C-CCCeeEEEEEEEEcCC----CceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEe------cCCCCceEEEEecc
Q psy3125 68 T-EPKMNMAIMLNVDDRG----RGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVI------HPQNSDEWNMKIDY 133 (163)
Q Consensus 68 ~-~~~~~~~~~l~V~~~~----~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~i~~ 133 (163)
+ .+.....+.+.+.... ....+..|..+.+.|.. .+.+.+.|+++++..... .........+.+..
T Consensus 104 n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~ 183 (226)
T 4f80_A 104 DGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVI 183 (226)
T ss_dssp ETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEE
T ss_pred CCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEE
Confidence 4 3333444444444432 12245567788888853 356788998765432111 11112222344557
Q ss_pred cCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 134 AQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 134 v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
++.+|+|.|+|.| |..+..+..+.|.|.
T Consensus 184 v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 184 MRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp ECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred echhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 7889999999999 888999999888875
No 73
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.79 E-value=5.8e-19 Score=116.67 Aligned_cols=136 Identities=16% Similarity=0.199 Sum_probs=95.6
Q ss_pred CceEEecCC-C-cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-R-PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~-~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.+ + .+.|+| ++..+. ..+.+|.|.+++.+|+|.|+|.+.+. ..+..+.|
T Consensus 24 L~C~~~~~~~~~~i~W~~--~~~~~~-------------------~~~~~L~i~~v~~~d~G~Y~C~~~~~-~~s~~~~l 81 (176)
T 1f2q_A 24 LTCNGNNFFEVSSTKWFH--NGSLSE-------------------ETNSSLNIVNAKFEDSGEYKCQHQQV-NESEPVYL 81 (176)
T ss_dssp EECCTTCC----CCEEEE--TTEECS-------------------CCSSEEEECSCCGGGCEEEEEECTTS-SCCCCEEE
T ss_pred EEEeCCCCCCcceEEEEE--CCeECC-------------------CCceEEEEeccceecCEEEEEEcCCc-cccccEEE
Confidence 579998888 3 699998 222110 12557999999999999999999542 23445666
Q ss_pred EEEcCC-----CceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC-
Q psy3125 79 NVDDRG-----RGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT- 148 (163)
Q Consensus 79 ~V~~~~-----~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~- 148 (163)
.|..++ +...+..|..+.+.|.. .+...+.|++++..+. .......|.|.+++.+|+|.|+|.| |.
T Consensus 82 ~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 157 (176)
T 1f2q_A 82 EVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK----YWYENHNISITNATVEDSGTYYCTGKVWQ 157 (176)
T ss_dssp EEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECC----SCCCSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEe----eecCCCeEEECCCCcccCEEEEEEEEeCC
Confidence 666331 23456688889999965 3345788988776442 1223457999999999999999999 64
Q ss_pred CCCccEEEEEEEec
Q psy3125 149 EPKMNMAIMLNVDG 162 (163)
Q Consensus 149 ~~~~~~~~~L~V~~ 162 (163)
.+..+..+.|.|.+
T Consensus 158 ~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 158 LDYESEPLNITVIK 171 (176)
T ss_dssp EEEECCCEEEEEEC
T ss_pred cceEecCEEEEEec
Confidence 34566778888875
No 74
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.79 E-value=1.2e-18 Score=118.98 Aligned_cols=137 Identities=18% Similarity=0.320 Sum_probs=98.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CC-eeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PK-MNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~-~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| +...+ . ..+..+|.|.+++.+|+|.|+|.+.+. +. .+..+.
T Consensus 38 L~C~~~~~p~~~v~W~~--~~~~~-------~-----------~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~ 97 (218)
T 3k0w_A 38 LCCRATGHPFVQYQWFK--MNKEI-------P-----------NGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQ 97 (218)
T ss_dssp EECEETTTTSSEEEEEE--TTEEC-------T-----------TCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEE
T ss_pred EEeeecCCCCCEEEEEE--CCEEC-------C-----------CCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEE
Confidence 679999998 9999998 22211 1 123557999999999999999999543 22 245566
Q ss_pred EEEEcCC---------------------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEeccc
Q psy3125 78 LNVDDRG---------------------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYA 134 (163)
Q Consensus 78 l~V~~~~---------------------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 134 (163)
|.|...+ ....+..|..+.+.|.. .+.+.+.|++++..+. . .....|.|.++
T Consensus 98 l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~--~---~~~~~L~i~~v 172 (218)
T 3k0w_A 98 LDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLT--H---ETKKLYMVPYV 172 (218)
T ss_dssp EEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECT--T---CCSSEEEESSC
T ss_pred EEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECC--C---CCCCEEEEeec
Confidence 7776542 23456678888999963 4456789988765332 1 22346999999
Q ss_pred CcCCCeeEEEEc-CCCCC-ccEEEEEEEec
Q psy3125 135 QKRDAGIYECQV-NTEPK-MNMAIMLNVDG 162 (163)
Q Consensus 135 ~~~D~G~Y~C~a-~~~~~-~~~~~~L~V~~ 162 (163)
+.+|+|.|+|.| |..|. .+..+.|.|.+
T Consensus 173 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 173 DLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp CGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred ChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 999999999999 76665 67788888764
No 75
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.79 E-value=4.8e-19 Score=129.79 Aligned_cols=145 Identities=15% Similarity=0.254 Sum_probs=104.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+|.+.. +. .++ .....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 227 l~C~~~g~p~~~i~W~~~~~~--~~---------~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 289 (382)
T 1cs6_A 227 LECFAFGNPVPQIKWRKLDGS--QT---------SKW------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRI 289 (382)
T ss_dssp EECEEEEESCCEEEEEECCSC--CS---------CCC------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEccCCCCEEEEEECCcc--cc---------cEE------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 579999999 99999984322 10 010 123557999999999999999999 445555666677
Q ss_pred EEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..+ +....+..|..+.+.|.. .+.+.+.|++++..+............|.|.+++.+|+|.|+|.| |..
T Consensus 290 ~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 369 (382)
T 1cs6_A 290 IIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKH 369 (382)
T ss_dssp EEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCC
Confidence 77654 334567778889999963 345678898876533211100001236999999999999999999 999
Q ss_pred CCccEEEEEEEec
Q psy3125 150 PKMNMAIMLNVDG 162 (163)
Q Consensus 150 ~~~~~~~~L~V~~ 162 (163)
|..+..+.|.|..
T Consensus 370 G~~~~~~~l~V~a 382 (382)
T 1cs6_A 370 GTVYASAELTVQA 382 (382)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CeEEEEEEEEEeC
Confidence 9999999999963
No 76
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.79 E-value=5e-19 Score=117.65 Aligned_cols=150 Identities=20% Similarity=0.293 Sum_probs=100.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-C--eeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-K--MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~--~~~~~ 76 (163)
|.|.+.+.| +.+.|+|.+ ..+. ...+.|+.+.. +.+|.|.+++.+|+|.|+|.+.+.. . ....+
T Consensus 22 l~C~~~~~p~~~v~W~~~~-~~~~------~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 89 (189)
T 2v5t_A 22 VVCRVSSSPAPAVSWLYHN-EEVT------TISDNRFAMLA-----NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDI 89 (189)
T ss_dssp ECCEEECSSCCEEEEEC------C------BCCCTTEEECT-----TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCCCEEEEEECC-ccce------eccCCeEEEec-----CCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEE
Confidence 689999988 999999832 1111 11356666553 3359999999999999999995432 2 22344
Q ss_pred EEEEEcCC------C--ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC--CCCceEEEEecccCcCCCeeEEE
Q psy3125 77 MLNVDDRG------R--GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP--QNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 77 ~l~V~~~~------~--~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.|.|..++ . ...+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|.|+|
T Consensus 90 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 169 (189)
T 2v5t_A 90 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVC 169 (189)
T ss_dssp EEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEE
T ss_pred EEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEE
Confidence 55554432 1 2244567888898864 34557889887653321100 00123469999999999999999
Q ss_pred Ec-CCCCCccEEEEEEEec
Q psy3125 145 QV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~ 162 (163)
.| |..|..+..+.|.|..
T Consensus 170 ~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 170 RATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCceeEEEEEEEEe
Confidence 99 8889999999998864
No 77
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.78 E-value=5.4e-19 Score=124.95 Aligned_cols=151 Identities=19% Similarity=0.267 Sum_probs=103.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-C-C-CeeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-E-P-KMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~-~-~~~~~~ 76 (163)
|.|.+.+.| +.|.|+|.+. .+.. ..+.++.... +.+|.|.+++.+|+|.|+|.+.+ . + .....+
T Consensus 120 l~C~~~~~p~~~v~W~~~~~-~~~~------~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 187 (291)
T 1qz1_A 120 IVCDVVSSLPPTIIWKHKGR-DVIL------KKDVRFIVLS-----NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDI 187 (291)
T ss_dssp ECCEEECSSCCEEEEEETTS-CSST------TCCTTEEECT-----TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEE
T ss_pred EEEEeccCCCCEEEEEECCE-Eccc------CCCceEEEcc-----CCcEEEccCccccCeEEEEEEEecCCCceeeEEE
Confidence 579999999 9999998321 1110 1234555443 34699999999999999999953 2 2 223445
Q ss_pred EEEEEcCCC--------ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC------CCCceEEEEecccCcCCCe
Q psy3125 77 MLNVDDRGR--------GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP------QNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 77 ~l~V~~~~~--------~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~L~i~~v~~~D~G 140 (163)
.|.|..++. ...+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|
T Consensus 188 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 267 (291)
T 1qz1_A 188 QVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEA 267 (291)
T ss_dssp EEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCE
T ss_pred EEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCE
Confidence 565554321 2245568888999963 34567899987653321110 0122356999999999999
Q ss_pred eEEEEc-CCCCCccEEEEEEEecC
Q psy3125 141 IYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 141 ~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
.|+|.| |..|..+..+.|.|..|
T Consensus 268 ~Y~C~a~N~~G~~~~~~~l~V~~k 291 (291)
T 1qz1_A 268 EYVCIAENKAGEQDASIHLKVFAK 291 (291)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEeCCCceEEEEEEEEEcC
Confidence 999999 99999999999999875
No 78
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.78 E-value=5.7e-19 Score=129.96 Aligned_cols=148 Identities=14% Similarity=0.210 Sum_probs=104.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+| ++..+. ...+ .... .+.+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 242 l~C~~~g~p~~~v~W~~--~~~~~~-------~~~~-~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 307 (404)
T 3p3y_A 242 LECIASGVPTPDIAWYK--KGGDLP-------SDKA-KFEN----FNKALRITNVSEEDSGEYFCLASNKMGSIRHTISV 307 (404)
T ss_dssp EECCBCCSSCCEEEEEE--TTBCCC-------TTTE-EEEG----GGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEECCCCCCcEEEEE--CCEECC-------CCcc-cccc----cCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEE
Confidence 579999999 9999998 322221 1111 2221 24479999999999999999994 45566677777
Q ss_pred EEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC---CCceEEEEecccCcCCCeeEEEEc-
Q psy3125 79 NVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 79 ~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
.|..+ +....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.|+|.|
T Consensus 308 ~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 387 (404)
T 3p3y_A 308 RVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTS 387 (404)
T ss_dssp EEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEE
T ss_pred EEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEE
Confidence 77654 334567778889999963 345678998876533211100 001236999999999999999999
Q ss_pred CCCCCccEEEEEEEec
Q psy3125 147 NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 147 ~~~~~~~~~~~L~V~~ 162 (163)
|..|..+..+.|.|..
T Consensus 388 N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 388 NEHGYLLANAFVSVLD 403 (404)
T ss_dssp ETTEEEEEEEEEEEC-
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999999999999863
No 79
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.78 E-value=2.8e-18 Score=126.32 Aligned_cols=149 Identities=17% Similarity=0.239 Sum_probs=107.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+| +...+. ....++.+.. +.+|.|.+++.+|+|.|+|.+ +..+..+..+.|
T Consensus 241 l~C~~~~~p~~~~~W~~--~~~~~~------~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 307 (403)
T 3laf_A 241 LECCVSGYPPPSFTWLR--GEEVIQ------LRSKKYSLLG-----GSNLLISNVTDDDSGTYTCVVTYKNENISASAEL 307 (403)
T ss_dssp ECCEEEEESCCEEEEEE--TTEECC------CSSSSEEEET-----TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEcCCCCCCeEEEEE--CCeecc------CCCceEEECC-----ccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEE
Confidence 579999988 9999998 332221 1234454443 346999999999999999999 445556677777
Q ss_pred EEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC-CCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 79 NVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 79 ~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
.|..+ +....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.++..+|+|.|+|.| |.
T Consensus 308 ~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 387 (403)
T 3laf_A 308 TVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENE 387 (403)
T ss_dssp EEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEET
T ss_pred EEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcC
Confidence 77654 334456678889999963 345578898887543211000 011235999999999999999999 99
Q ss_pred CCCccEEEEEEEec
Q psy3125 149 EPKMNMAIMLNVDG 162 (163)
Q Consensus 149 ~~~~~~~~~L~V~~ 162 (163)
.|..+..+.|.|++
T Consensus 388 ~G~~~~~~~l~V~~ 401 (403)
T 3laf_A 388 AGNAQSSAQLIVPK 401 (403)
T ss_dssp TEEEEEEEEEECCC
T ss_pred CceEEEEEEEEEeC
Confidence 99999999999975
No 80
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.78 E-value=1.2e-18 Score=118.79 Aligned_cols=163 Identities=12% Similarity=0.155 Sum_probs=105.4
Q ss_pred CceEEecCC------CcEEEEEecCCe-eEEecceE---ecCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG------RPVSWMRKRDLH-ILTTNIYT---YTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~~-~~~~~~~~---~~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.+... ++.+.... ....+|+.+.... ..++.+|.|.+++.+|+|.|+|.+.+.
T Consensus 15 L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 94 (222)
T 4i0k_A 15 LRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGSYTCFVSIQ 94 (222)
T ss_dssp ECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSCEEEEEEEC
T ss_pred EEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEEEEEEEEeC
Confidence 579888763 679999854332 22221111 1224566655321 123678999999999999999999654
Q ss_pred CCeeEEEEEEEEcCCCc--------eEeeCCCeEEEecCC---CCceeEEEEeCCCeE-----E--EecCCCCceEEEEe
Q psy3125 70 PKMNMAIMLNVDDRGRG--------ARLSAGPLLNFAFPD---LLTTNIYTYTGDARF-----S--VIHPQNSDEWNMKI 131 (163)
Q Consensus 70 ~~~~~~~~l~V~~~~~~--------~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~L~i 131 (163)
...+..+.|.|..++.. ..+..|..+.+.|.. .+.+.+.|+.++... . ...........|.|
T Consensus 95 ~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 174 (222)
T 4i0k_A 95 DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSV 174 (222)
T ss_dssp CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEE
T ss_pred CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEE
Confidence 44455556666654222 234467788888864 245678888744321 1 11122233345899
Q ss_pred cccCcCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 132 DYAQKRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 132 ~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
.+++.+|+|.|+|.| |..+..+..+.|.|.++
T Consensus 175 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 207 (222)
T 4i0k_A 175 LRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQ 207 (222)
T ss_dssp EEEECCTTCEEEEEEEETTTTEEEEEEEECCC-
T ss_pred EEEEeCCCCEEEEEEECCCCCCceEEEEEEeCC
Confidence 999999999999999 99999999999998764
No 81
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.4e-17 Score=110.52 Aligned_cols=141 Identities=16% Similarity=0.301 Sum_probs=97.1
Q ss_pred CceEEecCC-C--cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEE
Q psy3125 1 MACTVMGLG-R--PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~--~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~ 77 (163)
|.|.+.+.+ + .+.|+| ++..+..+ .+ ......|.|. +.+|+|.|+|.+.+. ....+.
T Consensus 18 l~C~~~~~~~p~~~~~W~k--~~~~l~~~-------~~-------~~~~~~l~i~--~~~d~G~Y~C~~~n~--~~~~~~ 77 (184)
T 3b5h_A 18 LTCSLNDSATEVTGHRWLK--GGVVLKED-------AL-------PGQKTEFKVD--SDDQWGEYSCVFLPE--PMGTAN 77 (184)
T ss_dssp EEEEEESCSSCCCEEEEES--SSEEEECT-------TC-------CCSEEEEEEC--GGGCCEEEEEEEEST--TSCEEE
T ss_pred EEEECCCCCCCceEEEEEe--CCEEeecc-------cc-------cCCcEEEEEe--chhhCeEEEEEEECC--cCcEEE
Confidence 689999887 5 899998 33333211 10 1124456666 689999999999653 235566
Q ss_pred EEEEcCC------CceEeeCCCeEEEecCC--CC-ceeEEEEe---CCCe---------EEEecCCCCceEEEEecccC-
Q psy3125 78 LNVDDRG------RGARLSAGPLLNFAFPD--LL-TTNIYTYT---GDAR---------FSVIHPQNSDEWNMKIDYAQ- 135 (163)
Q Consensus 78 l~V~~~~------~~~~v~~~~~~~~~~~~--~~-~~~~~~~~---~~~~---------~~~~~~~~~~~~~L~i~~v~- 135 (163)
|.|..++ ....+..|..+.+.|.. .+ .+.+.|++ ++.. +.+.. ......|.|.+++
T Consensus 78 l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~ 155 (184)
T 3b5h_A 78 IQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS--SQGRSELHIENLNM 155 (184)
T ss_dssp EEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEE--ETTEEEEEECSCCT
T ss_pred EEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEe--cCCeeEEEEeeccc
Confidence 7776553 23346678889999964 34 46788988 3332 22221 1234579999999
Q ss_pred cCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 136 KRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 136 ~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
.+|+|.|+|.| |..|..+..+.|.|+++
T Consensus 156 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~r 184 (184)
T 3b5h_A 156 EADPGQYRCNGTSSKGSDQAIITLRVRSH 184 (184)
T ss_dssp TTSSEEEEEEEEETTEEEEEEEEEEEC--
T ss_pred cccCceEEEEEEeCCCcceEEEEEEEecC
Confidence 99999999999 99999999999999874
No 82
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.78 E-value=1.1e-17 Score=119.16 Aligned_cols=143 Identities=17% Similarity=0.245 Sum_probs=96.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCc-CCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQK-RDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|.+.+.| +.|.|+|. +..+ ...|+.+.........+|.|.+++. +|+|.|+|.+.+ .+..+..+.
T Consensus 26 l~C~~~g~p~~~i~W~k~--g~~i--------~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 95 (304)
T 2yd9_A 26 FVCQATGDPKPRVTWNKK--GKKV--------NSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAK 95 (304)
T ss_dssp EEEEEECSSCCEEEEC-----------------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEE
T ss_pred EEEEEEEeCCCeEEEEEC--CEEC--------CCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEE
Confidence 689999999 99999982 2222 2345555443334458899999998 999999999944 455566777
Q ss_pred EEEEcC-------------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC----CCceEEEEecccCcCC
Q psy3125 78 LNVDDR-------------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ----NSDEWNMKIDYAQKRD 138 (163)
Q Consensus 78 l~V~~~-------------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~D 138 (163)
|.|... +....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|
T Consensus 96 l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 175 (304)
T 2yd9_A 96 LTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETD 175 (304)
T ss_dssp EEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGG
T ss_pred EEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCccc
Confidence 888753 122356678888898863 445678999876533211100 0112369999999999
Q ss_pred CeeEEEEc-CCCCCcc
Q psy3125 139 AGIYECQV-NTEPKMN 153 (163)
Q Consensus 139 ~G~Y~C~a-~~~~~~~ 153 (163)
+|.|+|.| |..+...
T Consensus 176 ~G~Y~C~a~n~~g~~~ 191 (304)
T 2yd9_A 176 QGKYECVATNSAGVRY 191 (304)
T ss_dssp CEEEEEEEEETTEEEE
T ss_pred CEEEEEEEEeCCCCEE
Confidence 99999999 7666443
No 83
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=1.5e-17 Score=114.78 Aligned_cols=145 Identities=16% Similarity=0.258 Sum_probs=96.1
Q ss_pred CceEEecCC-----CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-
Q psy3125 1 MACTVMGLG-----RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE- 69 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~- 69 (163)
|.|.+.+.+ +.|.|+|.+.. ..+........ ..+||.+.. ..+.++|.|.+++.+|+|.|+|.+.+.
T Consensus 21 L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~ 98 (240)
T 1moe_A 21 MSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG--SRTDFTLIIDPVEADDVATYYCQQTNED 98 (240)
T ss_dssp EEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe--cCCeEEEEEcCCChhhCEEEEEEEccCC
Confidence 679998874 78999996422 12221111111 246888865 346889999999999999999999553
Q ss_pred CC-eeEEEEEEEEcCC------------CceEeeCCCeEEEecCCC--C--ceeEEEEeCC-------------------
Q psy3125 70 PK-MNMAIMLNVDDRG------------RGARLSAGPLLNFAFPDL--L--TTNIYTYTGD------------------- 113 (163)
Q Consensus 70 ~~-~~~~~~l~V~~~~------------~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~~------------------- 113 (163)
+. ....+.|.|..++ ....+..|..+.+.|... + ...+.|++..
T Consensus 99 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~ 178 (240)
T 1moe_A 99 PYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSK 178 (240)
T ss_dssp SCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEE
T ss_pred ceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccc
Confidence 22 3445567776532 223566788899999642 2 3578898741
Q ss_pred ------CeEEEecCCCCceEEEEecccCcCCCeeEEEEcC
Q psy3125 114 ------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 147 (163)
Q Consensus 114 ------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 147 (163)
.|+.+..........|.|.+++.+|+|.|+|.|.
T Consensus 179 ~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 218 (240)
T 1moe_A 179 YVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPF 218 (240)
T ss_dssp ECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred cCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEE
Confidence 1233322222345679999999999999999993
No 84
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.78 E-value=9.1e-18 Score=111.96 Aligned_cols=144 Identities=12% Similarity=0.187 Sum_probs=95.1
Q ss_pred CC-CcEEEEEe-cCCeeEEe--cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe--eEEEEEEE
Q psy3125 8 LG-RPVSWMRK-RDLHILTT--NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM--NMAIMLNV 80 (163)
Q Consensus 8 ~~-~~v~W~k~-~~~~~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~--~~~~~l~V 80 (163)
.+ +.|.|+|. ++..+... +...+..++|+.+.. +++|.|.+++.+|+|.|+|++.+ .+.. ...+.|.|
T Consensus 28 ~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~-----ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V 102 (182)
T 1hnf_A 28 DDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFK-----NGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKI 102 (182)
T ss_dssp SSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECT-----TSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECC-----CCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEE
Confidence 44 78999983 23333221 111223467888764 34799999999999999999944 3333 35677888
Q ss_pred EcCCCceEeeC-CCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 81 DDRGRGARLSA-GPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 81 ~~~~~~~~v~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
.++...+.+.. +..+.+.|.. .+.+.+.|++++..+. .. ...|.+.. ..+|+|.|+|.| |..+..+...
T Consensus 103 ~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~-~~-----~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~ 175 (182)
T 1hnf_A 103 QERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLK-LS-----QRVITHKW-TTSLSAKFKCTAGNKVSKESSVE 175 (182)
T ss_dssp ECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEE-EE-----SSCEEEEC-CSCEEEEEEEEEECSSCEEEEEE
T ss_pred cCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECC-CC-----CcEEEEec-ccCCCcEEEEEEEeCCCCcEEcc
Confidence 87643333332 3367888864 3467889999888662 11 11133333 578999999999 8888888888
Q ss_pred EEEEecC
Q psy3125 157 MLNVDGK 163 (163)
Q Consensus 157 ~L~V~~~ 163 (163)
.+...+|
T Consensus 176 ~~~c~~~ 182 (182)
T 1hnf_A 176 PVSCPEK 182 (182)
T ss_dssp EEEECCC
T ss_pred eecCCCC
Confidence 8776554
No 85
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.78 E-value=5.9e-18 Score=120.44 Aligned_cols=162 Identities=15% Similarity=0.270 Sum_probs=100.0
Q ss_pred CceEEecCC---CcEEEEEecCC---eeEEe-c---ce-Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HILTT-N---IY-TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~~~-~---~~-~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.. ..+.. . .. .. ...+|+.+......+.++|.|.+++.+|+|.|+|.+.
T Consensus 42 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 121 (291)
T 2gki_A 42 MSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDSAVYYCARG 121 (291)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEe
Confidence 689999875 79999996422 11111 0 00 00 1246887765333457899999999999999999995
Q ss_pred CCC----C--eeEEEEEEEEcC----------------------CCceEeeCCCeEEEecCCC--Cce------eEEEEe
Q psy3125 68 TEP----K--MNMAIMLNVDDR----------------------GRGARLSAGPLLNFAFPDL--LTT------NIYTYT 111 (163)
Q Consensus 68 ~~~----~--~~~~~~l~V~~~----------------------~~~~~v~~~~~~~~~~~~~--~~~------~~~~~~ 111 (163)
+.. . ....+.|.|..+ +....+..|..+.+.|... +.. .+.|++
T Consensus 122 ~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k 201 (291)
T 2gki_A 122 AYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQ 201 (291)
T ss_dssp CGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEE
T ss_pred ccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEE
Confidence 532 1 122346666651 2233577889999999642 222 788987
Q ss_pred CC--C--eEEEecC--------------CCCceEEEEecccCcCCCeeEEEEc-CCCC-CccEEEEEEEec
Q psy3125 112 GD--A--RFSVIHP--------------QNSDEWNMKIDYAQKRDAGIYECQV-NTEP-KMNMAIMLNVDG 162 (163)
Q Consensus 112 ~~--~--~~~~~~~--------------~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-~~~~~~~L~V~~ 162 (163)
.. . .+.+... .......|.|.+++.+|+|.|+|.| +... .......|.|++
T Consensus 202 ~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~ 272 (291)
T 2gki_A 202 QKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKH 272 (291)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 52 1 2211100 0123457999999999999999999 5321 122344566554
No 86
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.78 E-value=3.3e-19 Score=118.85 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=92.4
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---CeeEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---~~~~~~~ 77 (163)
|.|.+.+.++.+.|+|.+.. .. ....+|.|.+++.+|+|.|+|.+.+.. ..+..+.
T Consensus 27 L~C~~~~~~~~~~W~k~g~~----------------~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~ 85 (184)
T 2gi7_A 27 LRCQGPPGVDLYRLEKLSSS----------------RY-----QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLE 85 (184)
T ss_dssp EEEECSTTCSEEEEEETTTC----------------CE-----ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEE
T ss_pred EEEeCCCCCCEEEEEECCcc----------------cc-----CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEE
Confidence 67999883399999983211 00 124579999999999999999995432 2345567
Q ss_pred EEEEcCCC--------ceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 78 LNVDDRGR--------GARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 78 l~V~~~~~--------~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|.|..... ...+..|..+.+.|... ......|++++..+............|.|.+++.+|+|.|+|.| |
T Consensus 86 l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 165 (184)
T 2gi7_A 86 LVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFS 165 (184)
T ss_dssp EEEESSSCCCEEEEECCCSSCCTTCEEEEEECSSCCCEEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEEC
T ss_pred EEecCcCCCCEEEeCCCceecCCCcEEEEEEcCCCCcEEEEEECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEe
Confidence 77754311 22345678899999743 23577888876533211111123456999999999999999999 6
Q ss_pred CCC-----CccEEEEEEE
Q psy3125 148 TEP-----KMNMAIMLNV 160 (163)
Q Consensus 148 ~~~-----~~~~~~~L~V 160 (163)
..+ ..+..+.|.|
T Consensus 166 ~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 166 SRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp TTSTTBCCCCCCCEEEEC
T ss_pred CCCCcccCCCCCcEEEEe
Confidence 543 2466777766
No 87
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.78 E-value=3.2e-18 Score=120.82 Aligned_cols=149 Identities=17% Similarity=0.222 Sum_probs=105.4
Q ss_pred CceEEecCC-Cc-EEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CC-CCeeEEE
Q psy3125 1 MACTVMGLG-RP-VSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TE-PKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~-v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~-~~~~~~~ 76 (163)
|.|.+.+.+ +. +.|++.++.. .....++.+.. +.+|.|.+++.+|+|.|+|.+. +. ...+..+
T Consensus 109 L~C~~~~~~~~~~v~W~~~~~~~--------~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~ 175 (289)
T 3ejj_X 109 LPCLITDPALKDSVSLMREGGRQ--------VLRKTVYFFSP-----WRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGI 175 (289)
T ss_dssp ECEEESCGGGGGSEEEEEGGGEE--------CCTTCCEEEET-----TTEEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred eEEEccCCCcceEEEEEecCCee--------cCCCccEEECC-----CCCEEEeecccccCEEEEEEEEeCCCccccccE
Confidence 579999887 44 9999743222 23355666653 3459999999999999999995 32 2345667
Q ss_pred EEEEEcC---C-------CceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEe------cCCCCceEEEEecccCcC
Q psy3125 77 MLNVDDR---G-------RGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVI------HPQNSDEWNMKIDYAQKR 137 (163)
Q Consensus 77 ~l~V~~~---~-------~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~i~~v~~~ 137 (163)
.|.|... + ....+..|..+.+.|.. .+.+.+.|++++..+... .........|.|.+++.+
T Consensus 176 ~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (289)
T 3ejj_X 176 WLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQ 255 (289)
T ss_dssp EEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSS
T ss_pred EEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeeccc
Confidence 7887742 1 22234568888899963 456788999886533211 111122567999999999
Q ss_pred CCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 138 DAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 138 D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|+|.|+|.| |..|..+.++.|.+..
T Consensus 256 d~G~Y~C~a~N~~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 256 DAGIYSCVASNDVGTRTATMNFQVVE 281 (289)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEECC-
T ss_pred CCEEEEEEEEcCCCCccccEEEEEEe
Confidence 999999999 9999999999998864
No 88
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.77 E-value=6.5e-18 Score=114.53 Aligned_cols=155 Identities=12% Similarity=0.170 Sum_probs=100.8
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC----
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---- 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---- 70 (163)
|.|.+.+.+ +.|.|+|.+.. ..+....... ...+||.+.. ..++++|.|.+++.+|+|.|+|.+.+..
T Consensus 21 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 98 (213)
T 3nl4_L 21 IKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG--SGTDFTLTISDLECADAATYYCQSTYENPTYV 98 (213)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEECCSSTTTC
T ss_pred EEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec--CCCEEEEEECCCChHHCEEEEEecCCCCceeE
Confidence 689999998 99999985321 1222111111 1246888774 3468899999999999999999995432
Q ss_pred CeeEEEEEEEEcCCCc--eE-------eeCCCeEEEecCC---CCceeEEEEeCCCeEEE-----e-cC--CCC---ceE
Q psy3125 71 KMNMAIMLNVDDRGRG--AR-------LSAGPLLNFAFPD---LLTTNIYTYTGDARFSV-----I-HP--QNS---DEW 127 (163)
Q Consensus 71 ~~~~~~~l~V~~~~~~--~~-------v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~-~~--~~~---~~~ 127 (163)
.....+.|.|...... +. +..|..+.+.|.. .+.+.+.|++++..+.. . .. ... ...
T Consensus 99 ~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s 178 (213)
T 3nl4_L 99 SFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSS 178 (213)
T ss_dssp EECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEE
T ss_pred EeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEE
Confidence 2344556777543211 11 2236788898963 34678999988754321 1 00 111 125
Q ss_pred EEEecccCcCCCeeEEEEcCCCCCccEEEEEEE
Q psy3125 128 NMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 160 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a~~~~~~~~~~~L~V 160 (163)
.|.|.+++.+|+|.|+|.|. .+ ...+...|
T Consensus 179 ~L~i~~~~~~d~g~Y~C~a~-~g--~~~~~~~v 208 (213)
T 3nl4_L 179 TLTLTSTEYNSHKEYTCKVT-QG--TTSVVQSF 208 (213)
T ss_dssp EEEEEHHHHHTCCEEEEEEE-ET--TEEEEEEE
T ss_pred EEEecHHHcCCCCeEEEEEE-eC--Cccccccc
Confidence 69999999999999999997 45 45555444
No 89
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.77 E-value=4.2e-17 Score=114.55 Aligned_cols=146 Identities=14% Similarity=0.229 Sum_probs=94.3
Q ss_pred CceEEecCC-------CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-------RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-------~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.+.+ ..+........ ..+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+
T Consensus 25 L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 102 (264)
T 2gjj_A 25 MTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG--SGTDFTLTIGSVKAEDLAVYYCQQYS 102 (264)
T ss_dssp EEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec--CCCEEEEEECCCCHHHCEEEEEEEec
Confidence 679998774 68999986422 12211111111 246888764 34578999999999999999999954
Q ss_pred CCC--eeEEEEEEEEcCC-------------------------CceEeeCCCeEEEecCCC--C--ceeEEEEeCC--C-
Q psy3125 69 EPK--MNMAIMLNVDDRG-------------------------RGARLSAGPLLNFAFPDL--L--TTNIYTYTGD--A- 114 (163)
Q Consensus 69 ~~~--~~~~~~l~V~~~~-------------------------~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~~--~- 114 (163)
... ....+.|.|..++ +...+..|..+.+.|... + ...+.|++.. .
T Consensus 103 ~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~ 182 (264)
T 2gjj_A 103 NYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKS 182 (264)
T ss_dssp SSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSC
T ss_pred CCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCC
Confidence 322 2334567776542 122456788899999632 2 2578888753 1
Q ss_pred -eE---------------------EEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 115 -RF---------------------SVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 115 -~~---------------------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
.+ .+..........|.|.+++.+|+|.|+|.| |.
T Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 183 PEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp CEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred cEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 11 111111234568999999999999999999 64
No 90
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=117.06 Aligned_cols=151 Identities=19% Similarity=0.164 Sum_probs=98.8
Q ss_pred CceE-EecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCee---
Q psy3125 1 MACT-VMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMN--- 73 (163)
Q Consensus 1 l~C~-~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~--- 73 (163)
|.|. +.+.| +.|.|+|.+..... ..+.+..... .+.+|.|.+++.+|+|.|+|.+.+ .....
T Consensus 28 L~C~~~~~~p~~~~v~W~~~~~~~~~-------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 96 (201)
T 3s97_C 28 LLCDPPYHFPDDLSYRWLLNEFPVFI-------TMDKRRFVSQ----TNGNLYIANVEASDKGNYSCFVSSPSITKSVFS 96 (201)
T ss_dssp ECCCCCSEESSCCEEEEEESSTTCBC-------CCSSSEEECT----TTCCEEESSCCGGGCEEEEEEEEEGGGTEEEEC
T ss_pred EeccccccCCCceEEEEEECCceeee-------eeCCCeEEEc----CCCeEEECcCCcccCeEEEEEEEecCCCcchhh
Confidence 5788 77776 79999983322111 1223333332 245699999999999999999954 22221
Q ss_pred EEEEEEEEc-------------CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCC
Q psy3125 74 MAIMLNVDD-------------RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRD 138 (163)
Q Consensus 74 ~~~~l~V~~-------------~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 138 (163)
..+.+.+.. ......+..|..+.+.|.. .+.+.+.|++++..+............|.|.+++.+|
T Consensus 97 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 176 (201)
T 3s97_C 97 KFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLED 176 (201)
T ss_dssp CCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCCGGG
T ss_pred cccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCChhh
Confidence 222333221 1224556778888999963 3456888988876332100001123469999999999
Q ss_pred CeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 139 AGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 139 ~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
+|.|+|.| |..|..+..+.|.|+.
T Consensus 177 ~G~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 177 EGIYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEEEEecCCceeeeEEEEEeC
Confidence 99999999 9899999999999863
No 91
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.77 E-value=3.1e-18 Score=122.04 Aligned_cols=150 Identities=14% Similarity=0.246 Sum_probs=97.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CCee-EEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PKMN-MAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~~~-~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+.... ...|+.... +.+|.|.+++.+|+|.|+|.+.+. +... ....
T Consensus 128 l~C~~~g~p~~~v~W~k--~~~~~~~~~----~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~ 196 (304)
T 2yd9_A 128 MLCAASGNPDPEITWFK--DFLPVDPSA----SNGRIKQLR-----SGALQIESSEETDQGKYECVATNSAGVRYSSPAN 196 (304)
T ss_dssp ECCEEECSSCCEEEEEE--TTEECCGGG----GTTSEEECT-----TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred EEEECccCCCCeEEEEE--CCEECcCCC----CcceEEeCC-----CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEE
Confidence 579999999 9999998 333222110 122443322 337999999999999999999543 2222 1244
Q ss_pred EEEEcC---------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 78 LNVDDR---------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 78 l~V~~~---------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
|.|... +....+..|..+.+.|.. .+.+.+.|++++..+............|.|.++ +|+|.|+|.|
T Consensus 197 l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a 274 (304)
T 2yd9_A 197 LYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVA 274 (304)
T ss_dssp EEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEE
T ss_pred EEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEE
Confidence 444321 223346678889999963 345678899887644322222233455777766 6999999999
Q ss_pred -CCCCCccEEEEEEEecC
Q psy3125 147 -NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 147 -~~~~~~~~~~~L~V~~~ 163 (163)
|..|..+..+.|.|+++
T Consensus 275 ~N~~G~~~~~~~l~V~~~ 292 (304)
T 2yd9_A 275 MSSLGVIEAVAQITVKSL 292 (304)
T ss_dssp EETTEEEEEEEEEC----
T ss_pred EeCCCcEEEEEEEEEecC
Confidence 99999999999998763
No 92
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.77 E-value=2.8e-18 Score=124.37 Aligned_cols=156 Identities=17% Similarity=0.218 Sum_probs=100.0
Q ss_pred CceEEecC-----------C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL-----------G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~-----------~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + +.|.|+|.+....+...........|+... +.+|.|.+++.+|+|.|+|.+.+
T Consensus 27 L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~------~~~L~i~~~~~~D~G~Y~C~a~n 100 (349)
T 4dep_C 27 IKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKE------KDVLWFRPTLLNDTGNYTCMLRN 100 (349)
T ss_dssp EECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEE------TTEEEESSCCGGGCEEEEEEEEC
T ss_pred EEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeec------CCEEEEccCChhhCEEEEEEEec
Confidence 57888863 3 899999854211000000000123344433 23699999999999999999954
Q ss_pred -CCCeeEEEEEEEEcCCC----------ceEeeCCCeEEEecCC-------CCceeEEEEeCCCeEEEecCCCCceEEEE
Q psy3125 69 -EPKMNMAIMLNVDDRGR----------GARLSAGPLLNFAFPD-------LLTTNIYTYTGDARFSVIHPQNSDEWNMK 130 (163)
Q Consensus 69 -~~~~~~~~~l~V~~~~~----------~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 130 (163)
.+.....+.|.|..++. ...+..|..+.+.|.. .+.+.+.|++++..+............|.
T Consensus 101 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~ 180 (349)
T 4dep_C 101 TTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLS 180 (349)
T ss_dssp SSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEETTEEE
T ss_pred CCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecCCEEE
Confidence 44556677888886532 2245678889999963 45678899987653311000001124599
Q ss_pred ecccCcCCCeeEEEEc-CCC-CCc---cEEEEEEEec
Q psy3125 131 IDYAQKRDAGIYECQV-NTE-PKM---NMAIMLNVDG 162 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~-~~~---~~~~~L~V~~ 162 (163)
|.+++.+|+|.|+|.| |.. +.. +..+.|.|.+
T Consensus 181 i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 181 FLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp EESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred EeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 9999999999999999 654 443 6777777754
No 93
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.77 E-value=1.3e-17 Score=113.03 Aligned_cols=156 Identities=10% Similarity=0.151 Sum_probs=98.8
Q ss_pred CceEEecCC-CcEEEEEecCCe---eEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-C-e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH---ILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-K-M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~---~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~-~ 72 (163)
|.|.+.+.+ +.|.|+|.+.+. .+........ ..+|+.+.. ..+..+|.|.+++.+|+|.|+|++.+.. . .
T Consensus 21 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 98 (213)
T 3d9a_L 21 LSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG--SGTDFTLSINSVETEDFGMYFCQQSNSWPYTF 98 (213)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc--CCCEEEEEECCCChhhCEEEEEeeecCCccee
Confidence 689999998 999999854321 1222211111 236887775 3457899999999999999999995432 2 2
Q ss_pred eEEEEEEEEcC--CCceEee-------CCCeEEEecCC---CCce-eEEEEeCCCeEEEe------cCC-CCc----eEE
Q psy3125 73 NMAIMLNVDDR--GRGARLS-------AGPLLNFAFPD---LLTT-NIYTYTGDARFSVI------HPQ-NSD----EWN 128 (163)
Q Consensus 73 ~~~~~l~V~~~--~~~~~v~-------~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~------~~~-~~~----~~~ 128 (163)
...+.|.|... ++.+.+. .|..+.+.|.. .+.. .+.|++++..+... ... ... ...
T Consensus 99 ~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~ 178 (213)
T 3d9a_L 99 GGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSST 178 (213)
T ss_dssp CCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEE
T ss_pred CCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEE
Confidence 23446777643 2222221 35688899964 2232 68899887643211 001 111 347
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
|.|.+++.+|+|.|+|.| |..........+
T Consensus 179 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 179 LTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp EEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred EEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 999999999999999999 765554433333
No 94
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.77 E-value=5.1e-18 Score=120.17 Aligned_cols=159 Identities=14% Similarity=0.221 Sum_probs=102.7
Q ss_pred CceEEecC--C-CcEEEEEecCC----eeEEec-c-----eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL----HILTTN-I-----YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~----~~~~~~-~-----~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. + +.|.|+|.+.. .++... . ......+||.+..+...+.++|.|.+++.+|+|.|+|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 99 (280)
T 3fku_X 20 VSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSEDTAVYYCARS 99 (280)
T ss_dssp EEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCSTTCEECCEEEC
T ss_pred EEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 68999885 4 89999985322 122211 0 0111246888885445668899999999999999999995
Q ss_pred CC----------CCeeEEEEEEEEc---------------C-----CCceEeeCCCeEEEecCCCC----ceeEEEEeCC
Q psy3125 68 TE----------PKMNMAIMLNVDD---------------R-----GRGARLSAGPLLNFAFPDLL----TTNIYTYTGD 113 (163)
Q Consensus 68 ~~----------~~~~~~~~l~V~~---------------~-----~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~ 113 (163)
+. ......+.|.|.. + ++...+..|..+.+.|.... ...+.|++..
T Consensus 100 ~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 179 (280)
T 3fku_X 100 PSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTGNSNNVGNQGAAWLQQH 179 (280)
T ss_dssp SSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEECCCCCCCTTCCEEEEEC
T ss_pred cCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEecCCCCCCceEEEEEEC
Confidence 53 1123345566655 1 12256778899999996543 3678887631
Q ss_pred --------------------CeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCC---ccEEEEEEEe
Q psy3125 114 --------------------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPK---MNMAIMLNVD 161 (163)
Q Consensus 114 --------------------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~---~~~~~~L~V~ 161 (163)
.|+.+.. ......|.|.+++.+|+|.|+|.+ +..+. ....+.|.|.
T Consensus 180 ~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~ 249 (280)
T 3fku_X 180 QGHPPKLLSYRNNDRPSGISERFSASR--SGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTKLTVL 249 (280)
T ss_dssp SSSCCEESCCTTCCCCSSSCTTEEEEE--ETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCEEEEC
T ss_pred CCCCCEEEEEeccccCCCCCCCEEEEc--cCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEEEEEC
Confidence 2233222 133567999999999999999999 54311 2334456654
No 95
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.77 E-value=8.2e-18 Score=110.24 Aligned_cols=135 Identities=13% Similarity=0.196 Sum_probs=96.6
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.+ +.+.|+| ++..+. . ....+.|.+++.+|+|.|+|.+.+ ...+..+.|
T Consensus 24 l~C~~~~~p~~~~~~W~~--~g~~~~-------~------------~~~~~~~~~~~~~d~G~Y~C~~~~-~~~s~~~~l 81 (170)
T 3ry4_A 24 LTCQGARSPESDSIQWFH--NGNLIP-------T------------HTQPSYRFKANNNDSGEYTCQTGQ-TSLSDPVHL 81 (170)
T ss_dssp EEEESCCCSSSSCEEEEE--TTEECT-------T------------CCSSEEEEECCGGGCEEEEEEETT-SBCCCCEEE
T ss_pred EEEEecCCCCcceEEEEE--CCeEcc-------c------------CccceEEEecccccCeEEEEEEeC-CCceEeEEE
Confidence 579999886 7999998 322211 1 122367889999999999999954 233445667
Q ss_pred EEEcC-----CCceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDR-----GRGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~-----~~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..+ .+...+..|..+.+.|.. .+...+.|++++..+.... ....|.|.+++.+|+|.|+|.| |..
T Consensus 82 ~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~ 157 (170)
T 3ry4_A 82 TVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH----LDPTFSIPQANHSHSGDYHCTGNIGY 157 (170)
T ss_dssp EEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES----SCCEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC----CCCeEEEEeccccCCEEEEEEEEeCc
Confidence 77654 233456678889999964 2347889998877655432 2345999999999999999999 777
Q ss_pred CC-ccEEEEEEEe
Q psy3125 150 PK-MNMAIMLNVD 161 (163)
Q Consensus 150 ~~-~~~~~~L~V~ 161 (163)
+. .+..+.|.|+
T Consensus 158 g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 158 TLFSSKPVTITVQ 170 (170)
T ss_dssp EEEECCCEEEEEC
T ss_pred CccccccEEEEEC
Confidence 65 6677787774
No 96
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.77 E-value=3.7e-18 Score=113.59 Aligned_cols=147 Identities=12% Similarity=0.161 Sum_probs=96.9
Q ss_pred CceEEecC-C-CcEEEEEecCCeeEEecce----EecCC--CeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCe
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDLHILTTNIY----TYTGD--ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKM 72 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~~~~~~~~~----~~~~~--~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~ 72 (163)
|.|.+... + +.|.|+|.++..+...... .+... +|+.+.. .+++|.|.+++.+|+|.|+|++......
T Consensus 19 L~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~----~~~sL~I~~v~~~D~G~Y~C~v~~~~~~ 94 (180)
T 2dru_A 19 LTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDK----TNGALRIYNVSKEDRGDYYMRMLHETED 94 (180)
T ss_dssp ECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECT----TTCCEEECSCCGGGCEEEEEEEESSSEE
T ss_pred EeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeC----CCccEEEcCCCHHHCeEEEEEEEcCCeE
Confidence 57887553 3 8999998433334322211 11122 6777732 3677999999999999999999654455
Q ss_pred eEEEEEEEEcCCCceEe-eCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 73 NMAIMLNVDDRGRGARL-SAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 73 ~~~~~l~V~~~~~~~~v-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
...+.|.|.++...+.+ ..+..+.+.|.. .+.+.+.|++++..+. . .....|.+.. .+|+|.|+|.| |.
T Consensus 95 ~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~-~----~~~~~l~~~~--~~d~g~Y~C~a~N~ 167 (180)
T 2dru_A 95 QWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLR-S----LRQKTMSYQW--TNLRAPFKCKAVNR 167 (180)
T ss_dssp EEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEEETTEEEE-E----ESSSEEEEEC--SCCSSCEEEEEEET
T ss_pred EEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEEECCeECc-C----CCCCEEEEEE--hhcCccEEEEEecC
Confidence 67778999876433332 234558888864 2567889998887654 1 1123466633 78999999999 77
Q ss_pred CCCccEEEEE
Q psy3125 149 EPKMNMAIML 158 (163)
Q Consensus 149 ~~~~~~~~~L 158 (163)
.+..+..+.+
T Consensus 168 ~~~~~~~~~i 177 (180)
T 2dru_A 168 VSQESEMEVV 177 (180)
T ss_dssp TEEEEEEECC
T ss_pred cCccccceeE
Confidence 7766665544
No 97
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.77 E-value=1.5e-18 Score=117.22 Aligned_cols=157 Identities=15% Similarity=0.169 Sum_probs=97.4
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCe--EEEEEcccCcCCCeeEEEEeeCC-CCe-eEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDE--WNMKIDYAQKRDAGIYECQVNTE-PKM-NMA 75 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~~L~i~~v~~~D~G~Y~C~~~~~-~~~-~~~ 75 (163)
|.|.+.+.| +.|.|+| ++..+..... ....+..... .... ..|.|.+++.+|+|.|+|.+.+. +.. +..
T Consensus 29 l~C~~~~~p~~~v~W~~--~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 102 (212)
T 2v9r_A 29 LNCKAEGRPTPTIEWYK--GGERVETDKD--DPRSHRMLLP--SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHD 102 (212)
T ss_dssp ECCEEEEESCCEEEEEE--TTEECCCTTT--CTTCSEEECT--TSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCC
T ss_pred EEEEcCCCCCCEEEEEE--CCEEeecccc--ccccceEEec--CCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecc
Confidence 679999988 9999998 3322221110 0001111111 1111 13556788999999999999543 222 345
Q ss_pred EEEEEEcC-------CCceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecC-CCCceEEEEecccCcCCCeeEEE
Q psy3125 76 IMLNVDDR-------GRGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHP-QNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 76 ~~l~V~~~-------~~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
+.|.|... +....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|.|+|
T Consensus 103 ~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 182 (212)
T 2v9r_A 103 ASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC 182 (212)
T ss_dssp EEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEE
T ss_pred eEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEE
Confidence 56666542 234567788899999964 34568889887664321110 00112369999999999999999
Q ss_pred Ec-CCCCCcc-EEEEEEEecC
Q psy3125 145 QV-NTEPKMN-MAIMLNVDGK 163 (163)
Q Consensus 145 ~a-~~~~~~~-~~~~L~V~~~ 163 (163)
.| |..|... ..+.|.|..+
T Consensus 183 ~a~N~~g~~~s~~~~l~V~~~ 203 (212)
T 2v9r_A 183 VGTNMVGERESEVAELTVLER 203 (212)
T ss_dssp EEEETTEEEECCCEEEEEEC-
T ss_pred EEecccCceecceEEEEEEeC
Confidence 99 8777654 3588888753
No 98
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.76 E-value=1e-17 Score=122.27 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=99.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+|.+ ..+ . . ...+|.|.+++.+|+|.|+|.+.+ .......+.|
T Consensus 116 l~C~~~~~p~~~v~W~~~~-~~~--------------~-~-----~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l 174 (363)
T 1wio_A 116 LTLESPPGSSPSVQCRSPR-GKN--------------I-Q-----GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDI 174 (363)
T ss_dssp EEEECCTTCCCCEEEECSS-SCE--------------E-E-----ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEE
T ss_pred EEEEcCCCCCCeEEEEcCC-Ccc--------------c-c-----cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEE
Confidence 679999988 999999732 111 1 1 245699999999999999999943 3344556677
Q ss_pred EEEcCCC---ceEeeCCCeEEEecCC-------CCceeEEEEeCCCe--------------EEEecC--------CCCce
Q psy3125 79 NVDDRGR---GARLSAGPLLNFAFPD-------LLTTNIYTYTGDAR--------------FSVIHP--------QNSDE 126 (163)
Q Consensus 79 ~V~~~~~---~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~--------------~~~~~~--------~~~~~ 126 (163)
.|...+. ...+..|..+.+.|.. .+.+.+.|++++.. +.+... .....
T Consensus 175 ~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (363)
T 1wio_A 175 VVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLP 254 (363)
T ss_dssp CEECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSS
T ss_pred EEecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCc
Confidence 7775543 2356678899999953 23567889876542 211110 01224
Q ss_pred EEEEecccCcCCCeeEEEEc-CC--CCCccEEEEEEEe
Q psy3125 127 WNMKIDYAQKRDAGIYECQV-NT--EPKMNMAIMLNVD 161 (163)
Q Consensus 127 ~~L~i~~v~~~D~G~Y~C~a-~~--~~~~~~~~~L~V~ 161 (163)
..|.|.+++.+|+|.|+|.| |. .|..+..+.|.|.
T Consensus 255 ~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 255 LHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp CEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred eEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 47999999999999999999 88 7888889888875
No 99
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.76 E-value=2.6e-18 Score=115.45 Aligned_cols=148 Identities=8% Similarity=0.038 Sum_probs=89.3
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---CeeEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---~~~~~~~ 77 (163)
|.|.+.+.+..+.|+|.+. .+... .+ .........+|.|.+++.+|+|.|+|.+.+.. ..+..+.
T Consensus 24 L~C~~~~~~~~~~W~k~g~--~~~~~-------~~---~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~ 91 (196)
T 2d3v_A 24 IRCQGTLEAQEYRLVKEGS--PEPWD-------TQ---NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLE 91 (196)
T ss_dssp EEEECCTTCCEEEEEETTC--SSCSE-------EE---CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEE
T ss_pred EEEeCCCCCcEEEEEECCC--CCCcc-------cc---cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEE
Confidence 6799988878999998322 11100 00 00012357789999999999999999995422 2245567
Q ss_pred EEEEcCCC--------ceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEe------cCCCCceEEEEecccCcCCCeeE
Q psy3125 78 LNVDDRGR--------GARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVI------HPQNSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 78 l~V~~~~~--------~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~L~i~~v~~~D~G~Y 142 (163)
|.|..... ...+..|..+.+.|... ....+.|++++..+... .........|.|.+++.+|+|.|
T Consensus 92 l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 171 (196)
T 2d3v_A 92 LVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRFDRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWML 171 (196)
T ss_dssp EEEECSSCCCEEEC-----------CEEEEEESSCCSEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEE
T ss_pred EEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCCCEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeE
Confidence 77776321 12455678888999632 22678898887643211 11122347899999999999999
Q ss_pred EEEc-CCCC-----CccEEEEEEE
Q psy3125 143 ECQV-NTEP-----KMNMAIMLNV 160 (163)
Q Consensus 143 ~C~a-~~~~-----~~~~~~~L~V 160 (163)
+|.| |..+ ..+..+.|.|
T Consensus 172 ~C~a~n~~~~~~~s~~S~~~~l~V 195 (196)
T 2d3v_A 172 RCYGSRRHILQVWSEPSDLLEIPV 195 (196)
T ss_dssp EEEEEETTEEEEECCCCCCEEECC
T ss_pred EEEEEccCCCCccCCCCccEEEEe
Confidence 9999 6543 3455666655
No 100
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=2.9e-17 Score=114.16 Aligned_cols=150 Identities=14% Similarity=0.126 Sum_probs=100.5
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---CeeEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---~~~~~~~ 77 (163)
|.|.+.+.+..+.|+| ++..+... ..+. .......+|.|.+++.+|+|.|+|++.+.. ..+..+.
T Consensus 26 L~C~~~~~~~~~~w~k--~g~~~~~~------~~~~----~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~ 93 (242)
T 1p6f_A 26 ICCQGNYGAVEYQLHF--EGSLFAVD------RPKP----PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLD 93 (242)
T ss_dssp EEEECCTTCCEEEEEE--TTEEEEEE------CCSS----CTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEE
T ss_pred EEEeeCCCCcEEEEEE--CCCccccc------cccc----cCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceE
Confidence 5798876558899998 33222110 0000 012346789999999999999999995421 2345667
Q ss_pred EEEEcCC--------CceEeeCCCeEEEecCCCC-ceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 78 LNVDDRG--------RGARLSAGPLLNFAFPDLL-TTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 78 l~V~~~~--------~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|.|.... +...+..|..+.+.|.... .....|++++..+............|.|.+++.+|+|.|+|.| +
T Consensus 94 L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n 173 (242)
T 1p6f_A 94 LVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSY 173 (242)
T ss_dssp EEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEE
T ss_pred EEeecccCCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEEC
Confidence 7776421 1235677899999997533 3467888887654432212344677999999999999999999 5
Q ss_pred CC---CCccEEEEEEEec
Q psy3125 148 TE---PKMNMAIMLNVDG 162 (163)
Q Consensus 148 ~~---~~~~~~~~L~V~~ 162 (163)
.. ...+..+.|.|.+
T Consensus 174 ~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 174 NNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp ETTEECCCCCCEEEEEEC
T ss_pred CCCcccCCCCCEEEEEec
Confidence 43 3567788888876
No 101
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.76 E-value=8.9e-18 Score=121.17 Aligned_cols=147 Identities=15% Similarity=0.224 Sum_probs=102.8
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC---CCCe---
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT---EPKM--- 72 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~---~~~~--- 72 (163)
|.|.+.+.| +.|.|+| ++..+. ..+.++... +.+|.|.+++.+|+|.|+|.+.+ .+..
T Consensus 148 L~C~~~g~p~~~~i~W~k--~~~~l~------~~~~~~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~ 213 (329)
T 3oq3_B 148 LYCGILYAKHYNNITWYK--NNQELI------IDGTKYSQS------GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIV 213 (329)
T ss_dssp EECCCCSCCCCCEEEEEE--TTEECC------CSSSSEEEE------TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEE
T ss_pred EEeccCCCCCCceEEEEE--CCccCC------CCCceEecC------CCEEEEeecChhhCEEEEEEEEecccCCCceeE
Confidence 579999988 8999998 332221 123455544 24699999999999999999953 2222
Q ss_pred -eEEEEEEEEcCC---------CceEeeCCCeEEEecCCC--C---ce-eEEEEeCCCeEEEec---------CCCCceE
Q psy3125 73 -NMAIMLNVDDRG---------RGARLSAGPLLNFAFPDL--L---TT-NIYTYTGDARFSVIH---------PQNSDEW 127 (163)
Q Consensus 73 -~~~~~l~V~~~~---------~~~~v~~~~~~~~~~~~~--~---~~-~~~~~~~~~~~~~~~---------~~~~~~~ 127 (163)
+..+.|.|..++ ....+..|..+.+.|... + .+ .+.|++++..+.... .......
T Consensus 214 ~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~ 293 (329)
T 3oq3_B 214 VSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEA 293 (329)
T ss_dssp EEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEE
T ss_pred EEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEe
Confidence 233667777554 223566788899999632 2 34 678988766431110 0111356
Q ss_pred EEEecccCcCCCe-eEEEEc-CCCCCccEEEEEEEe
Q psy3125 128 NMKIDYAQKRDAG-IYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 128 ~L~i~~v~~~D~G-~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
.|.|.+++.+|+| .|+|.| |..|..+..+.|.|+
T Consensus 294 ~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 294 TLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp EEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 7999999999999 999999 999999999999874
No 102
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.76 E-value=2.6e-17 Score=111.49 Aligned_cols=150 Identities=13% Similarity=0.177 Sum_probs=95.8
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC--e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK--M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~--~ 72 (163)
|.|.+.+.+ +.|.|+|.+.+ ..+....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+... .
T Consensus 20 L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 97 (210)
T 1lk3_L 20 ISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG--SGTDFTLTIDPVEADDTAIYFCQQSWNGPLTF 97 (210)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe--cCCEEEEEECCCCHHHCeEEEEEEEcCCCcee
Confidence 689999998 99999985422 1122111111 1246888765 34578999999999999999999955322 2
Q ss_pred eEEEEEEEEcC--CCceEe-------eCCCeEEEecCCC---Cc-eeEEEEeCCCeEEE------ecCC-CC----ceEE
Q psy3125 73 NMAIMLNVDDR--GRGARL-------SAGPLLNFAFPDL---LT-TNIYTYTGDARFSV------IHPQ-NS----DEWN 128 (163)
Q Consensus 73 ~~~~~l~V~~~--~~~~~v-------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~------~~~~-~~----~~~~ 128 (163)
...+.|.|... ++.+.+ ..|..+.+.|... +. ..+.|++++..+.. .... .. ....
T Consensus 98 ~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~ 177 (210)
T 1lk3_L 98 GAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSST 177 (210)
T ss_dssp CCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEE
T ss_pred CCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEE
Confidence 23446777643 122222 1367889999642 22 36889988654321 1111 11 1237
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCc
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKM 152 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~ 152 (163)
|.|.++..+|+|.|+|.| |.....
T Consensus 178 L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 178 LSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp EEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEEChHHhccCCcEEEEEEecCCCC
Confidence 999999999999999999 665433
No 103
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.76 E-value=5.4e-18 Score=115.86 Aligned_cols=158 Identities=10% Similarity=0.205 Sum_probs=100.0
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Ee--c----ceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEE
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TT--N----IYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 65 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~--~----~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 65 (163)
|.|.+.+.+ +.|.|+|.+.+. .+ .. + ..... ..+|+.+..+...++++|.|.+++.+|+|.|.|.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 99 (222)
T 1q9r_B 20 LSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCA 99 (222)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCcccCeEEEEE
Confidence 689999864 899999864321 11 11 1 11111 2468988765445688999999999999999999
Q ss_pred eeCCC------CeeEEEEEEEEcCC---CceE-------eeCCCeEEEecCCC---Cce-eEEEEeCCCeE-----EEec
Q psy3125 66 VNTEP------KMNMAIMLNVDDRG---RGAR-------LSAGPLLNFAFPDL---LTT-NIYTYTGDARF-----SVIH 120 (163)
Q Consensus 66 ~~~~~------~~~~~~~l~V~~~~---~~~~-------v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~-----~~~~ 120 (163)
+.+.. .....+.|.|...+ +.+. +..|..+.+.|... +.+ .+.|+.++..+ ....
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~ 179 (222)
T 1q9r_B 100 RDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVL 179 (222)
T ss_dssp ECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEE
T ss_pred EeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccc
Confidence 95532 23344567776421 1111 23577889999642 444 78888776431 1111
Q ss_pred CCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEE
Q psy3125 121 PQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLN 159 (163)
Q Consensus 121 ~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~ 159 (163)
..+ .....|.|.++..+| |.|+|.| |..+.......|+
T Consensus 180 ~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 180 QSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp ETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred cCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 111 113469999999999 9999999 7766655554444
No 104
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.76 E-value=2.6e-18 Score=116.77 Aligned_cols=153 Identities=15% Similarity=0.230 Sum_probs=95.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CCe-eEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PKM-NMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~~-~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+.... ....++... .+.....|.|.+++.+|+|.|+|.+.+. +.. +..+.
T Consensus 29 L~C~~~g~p~~~v~W~~--~g~~~~~~~---~~~~~~~~~--~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~ 101 (217)
T 2vr9_A 29 LNCKVEGKPEPTIEWFK--DGEPVSTNE---KKSHRVQFK--DGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHAS 101 (217)
T ss_dssp ECCEEECSSCCEEEEEE--TTEECCCSS---SSSSEEECT--TSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEcCCCCCCeEEEEE--CCcCccCCC---ccceeEEec--CCceEEEEEeccCCcccCceEEEEEecCCCccccccce
Confidence 689999988 9999998 333222110 011222211 1111223478999999999999999543 222 23445
Q ss_pred EEEEcC-------CCceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecC----CC-----CceEEEEecccCcCC
Q psy3125 78 LNVDDR-------GRGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHP----QN-----SDEWNMKIDYAQKRD 138 (163)
Q Consensus 78 l~V~~~-------~~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~L~i~~v~~~D 138 (163)
|.|... +....+..|..+.+.|.. .+.+.+.|++++..+..... .. .....|.|.+++.+|
T Consensus 102 l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 181 (217)
T 2vr9_A 102 LQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPID 181 (217)
T ss_dssp EEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTT
T ss_pred EEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHH
Confidence 555432 234457788899999964 34567889987664431100 00 012369999999999
Q ss_pred CeeEEEEc-CCCCCccEEEEEEE
Q psy3125 139 AGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 139 ~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
+|.|+|.| |..|....++.+-|
T Consensus 182 ~G~Y~C~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 182 EGNYKCIAQNLVGTRESSYAKLI 204 (217)
T ss_dssp CEEEEEEEEETTEEEECCCEEEE
T ss_pred CeEEEEEEEcccceeccccEEEE
Confidence 99999999 88887665544433
No 105
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.76 E-value=6.1e-17 Score=123.32 Aligned_cols=155 Identities=17% Similarity=0.272 Sum_probs=106.2
Q ss_pred CceEEecCC-Cc-EEEEEecCCe-eEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEE
Q psy3125 1 MACTVMGLG-RP-VSWMRKRDLH-ILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~-v~W~k~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~ 76 (163)
|.|.+.+.| +. |.|+|.+... +.......+..+.++ ....+|.|.+++.+|+|.|+|.+. ..+.....+
T Consensus 231 L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 303 (524)
T 2ec8_A 231 VTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNY-------ERQATLTISSARVNDSGVFMCYANNTFGSANVTT 303 (524)
T ss_dssp EEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCE-------EEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEE
T ss_pred EEEEEecCCCcEEEEEEeCCCCCccccccccccccCCcc-------ceEEEEEECCCCHHHCEEEEEEEEecCCceEEEE
Confidence 679999998 66 9999843221 111111111111111 135689999999999999999994 455556677
Q ss_pred EEEEEcCCC---------ceEeeCCCeEEEecCC--CCcee-EEEEeCCCeEEEec-----CCC----CceEEEEecccC
Q psy3125 77 MLNVDDRGR---------GARLSAGPLLNFAFPD--LLTTN-IYTYTGDARFSVIH-----PQN----SDEWNMKIDYAQ 135 (163)
Q Consensus 77 ~l~V~~~~~---------~~~v~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~-----~~~----~~~~~L~i~~v~ 135 (163)
.|.|..++. ...+..|..+.+.|.. .+.+. +.|++++..+.... ... .....|.|.+++
T Consensus 304 ~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 383 (524)
T 2ec8_A 304 TLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLK 383 (524)
T ss_dssp EEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCC
T ss_pred EEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecC
Confidence 888876532 3456678889999963 23445 89998865332111 011 135689999999
Q ss_pred cCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 136 KRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 136 ~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 384 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 411 (524)
T 2ec8_A 384 GTEGGTYTFLVSNSDVNAAIAFNVYVNT 411 (524)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEECE
T ss_pred cccCeEEEEEEEecCceEEEEEEEEEec
Confidence 99999999999 9899999999999864
No 106
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.75 E-value=5.3e-18 Score=119.82 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=102.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-C--eeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-K--MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~--~~~~~ 76 (163)
|.|.+.+.| +.|.|+|.+ ..+.. ..+.|+.+.. +.+|.|.+++.+|+|.|+|.+.+.. . ....+
T Consensus 118 l~C~~~~~p~~~v~W~~~~-~~~~~------~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~ 185 (291)
T 2wim_A 118 VVCRVSSSPAPAVSWLYHN-EEVTT------ISDNRFAMLA-----NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDI 185 (291)
T ss_dssp ECCCCBCSSCCEEEEECC-----CB------CCCSSEEECT-----TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEccCCCCEEEEEECC-ccccc------cCCceEEEcc-----CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeE
Confidence 579999988 999999832 11111 1245666553 3359999999999999999995422 2 23455
Q ss_pred EEEEEcCCCc--------eEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC--CCCceEEEEecccCcCCCeeEEE
Q psy3125 77 MLNVDDRGRG--------ARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP--QNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 77 ~l~V~~~~~~--------~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.|.|..++.. ..+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|.|+|
T Consensus 186 ~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 265 (291)
T 2wim_A 186 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVC 265 (291)
T ss_dssp EEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEE
T ss_pred EEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEE
Confidence 6667665421 234568889999974 34567889887653321100 01223569999999999999999
Q ss_pred Ec-CCCCCccEEEEEEEec
Q psy3125 145 QV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~ 162 (163)
.| |..|..+.++.|.|..
T Consensus 266 ~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 266 RATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp EEEETTEEEEEEEEEEC--
T ss_pred EEEECCCceeeeEEEEEEE
Confidence 99 9999999999998864
No 107
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.75 E-value=4.2e-18 Score=122.48 Aligned_cols=152 Identities=14% Similarity=0.122 Sum_probs=103.4
Q ss_pred CceE-EecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACT-VMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~-~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|. +.+.| +.|.|+|..+.... .......++.+.+. ..|.|.++..+|+|.|+|.+.+ .+..+..+.
T Consensus 155 l~C~~~~~~p~~~i~W~~~~~~~~~--~~~~~~~~~~~~~~-------~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 225 (331)
T 3u83_A 155 ATCTSANGKPPSVVSWETRLKGEAE--YQEIRNPNGTVTVI-------SRYRLVPSREAHQQSLACIVNYHMDRFKESLT 225 (331)
T ss_dssp EEEEEEEEBSCCEEEEEESSCCEEE--EEEEECTTSCEEEE-------EEEEECCCGGGTTCEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCcCCceEEEEcCCCCccc--cceeECCCCcEEEE-------EEEEEEeccccCCCEEEEEEecCCCcceeeEE
Confidence 5797 88888 99999984322221 11112223344333 3599999999999999999944 445556666
Q ss_pred EEEEcCC-------CceEeeCCCeEEEecCC--CCcee-EEEEeCCCeEEEecCCCCceEEEEec-ccCcCCCeeEEEEc
Q psy3125 78 LNVDDRG-------RGARLSAGPLLNFAFPD--LLTTN-IYTYTGDARFSVIHPQNSDEWNMKID-YAQKRDAGIYECQV 146 (163)
Q Consensus 78 l~V~~~~-------~~~~v~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~-~v~~~D~G~Y~C~a 146 (163)
|.|..++ ....+..|..+.+.|.. .+.+. +.|++++..+.... ......|.|. +++.+|+|.|+|.|
T Consensus 226 l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~--~~~~~~L~i~~~v~~~d~G~Y~C~a 303 (331)
T 3u83_A 226 LNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV--EAQNRTLFFKGPINYSLAGTYICEA 303 (331)
T ss_dssp CCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EEETTEEEECSCCCGGGCEEEEEEE
T ss_pred EEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc--eecCcEEEEeCCCccccCeEEEEEE
Confidence 6665432 22335567888999963 34455 89998876442110 0112359999 99999999999999
Q ss_pred -CCCCCccEEEEEEEecC
Q psy3125 147 -NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 147 -~~~~~~~~~~~L~V~~~ 163 (163)
|..|..+..+.|.|.++
T Consensus 304 ~N~~G~~~~~~~l~V~~~ 321 (331)
T 3u83_A 304 TNPIGTRSGQVEVNITEA 321 (331)
T ss_dssp EETTEEEEEEEEECCBC-
T ss_pred EeccccceEEEEEEEecc
Confidence 99999999999999764
No 108
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.75 E-value=6.3e-18 Score=115.22 Aligned_cols=158 Identities=11% Similarity=0.175 Sum_probs=96.8
Q ss_pred CceEEecCC---CcEEEEEecCC-eeE---Ee----cceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL-HIL---TT----NIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~-~~~---~~----~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+ .+. .. +...+ ...+|+.+..+...++.+|.|.+++.+|+|.|+|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 99 (219)
T 1c1e_H 20 ISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNEDMATYFCARG 99 (219)
T ss_dssp EEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEe
Confidence 689999864 88999986422 221 10 01111 1247888875433457899999999999999999995
Q ss_pred CCC-----CeeEEEEEEEEcCC---Cce-------EeeCCCeEEEecCC---CCce-eEEEEeCCCeEEEec-----CCC
Q psy3125 68 TEP-----KMNMAIMLNVDDRG---RGA-------RLSAGPLLNFAFPD---LLTT-NIYTYTGDARFSVIH-----PQN 123 (163)
Q Consensus 68 ~~~-----~~~~~~~l~V~~~~---~~~-------~v~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~-----~~~ 123 (163)
+.. .....+.|.|...+ +.+ .+..|..+.+.|.. .+.+ .+.|++++..+.... ..+
T Consensus 100 ~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~ 179 (219)
T 1c1e_H 100 TTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD 179 (219)
T ss_dssp ETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSS
T ss_pred ccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCC
Confidence 533 22235567776531 111 12357788999964 3445 788988765321110 011
Q ss_pred C--ceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEE
Q psy3125 124 S--DEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLN 159 (163)
Q Consensus 124 ~--~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~ 159 (163)
. ....|.|... ..|+|.|+|.| |..+.......|.
T Consensus 180 ~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 180 LYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp CEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEECC
T ss_pred eEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEecC
Confidence 1 2346899444 44669999999 7766655554443
No 109
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.75 E-value=5.2e-18 Score=114.46 Aligned_cols=156 Identities=14% Similarity=0.228 Sum_probs=100.8
Q ss_pred CceEEecCC-CcEEEEEecC----CeeEEec--ce-Eec---CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRD----LHILTTN--IY-TYT---GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~----~~~~~~~--~~-~~~---~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|...+.+ +.|.|+|.+. ..+.... .. ... ..+|+.+.. +.+|.|.+++.+|+|.|+|.+.+.
T Consensus 19 L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~-----~~~L~i~~v~~~D~G~Y~C~~~~~ 93 (208)
T 3r4d_A 19 LLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS-----NGSLLFQMITMKDMGVYTLDMTDE 93 (208)
T ss_dssp EEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT-----TSCEEECSCCGGGCEEEEEEEECS
T ss_pred EEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEec-----CCeEEEccccccCCeEEEEEEEcc
Confidence 579977777 9999998421 1121110 00 000 134666553 346999999999999999999553
Q ss_pred --CCeeEEEEEEEEcCCCceE-------eeCCCeEEEecCCC-CceeEEEEeCCCeEEEecC--CCCceEEEEecccCcC
Q psy3125 70 --PKMNMAIMLNVDDRGRGAR-------LSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIHP--QNSDEWNMKIDYAQKR 137 (163)
Q Consensus 70 --~~~~~~~~l~V~~~~~~~~-------v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~ 137 (163)
......+.|.|..++..+. +..|..+.+.|... ..+.+.|++++..+..... .......|.|.+++.+
T Consensus 94 ~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~ 173 (208)
T 3r4d_A 94 NYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKRE 173 (208)
T ss_dssp SCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTCEEEEEETTEECCCCSSEEEETTTTEEEESSCCGG
T ss_pred cCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCCceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHH
Confidence 3455677788876532222 45677889999643 2358889887653321110 0012246999999999
Q ss_pred CCeeEEEEc-CCCCC-ccEEEEEEEe
Q psy3125 138 DAGIYECQV-NTEPK-MNMAIMLNVD 161 (163)
Q Consensus 138 D~G~Y~C~a-~~~~~-~~~~~~L~V~ 161 (163)
|+|.|+|.| |..|. .+..+.|.|.
T Consensus 174 d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 174 DAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp GCEEEEEEEECTTCCEECCCEEECCC
T ss_pred hCeEEEEEEecCCCcccCCceeeeEE
Confidence 999999999 77664 4567777664
No 110
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.75 E-value=1.1e-17 Score=115.03 Aligned_cols=155 Identities=13% Similarity=0.168 Sum_probs=99.0
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEec-ceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTN-IYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~-~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|.+.+.+ +.|.|+|.+.. ..+... ... ...++||.+.. ..++.+|.|.+++.+|+|.|+|.+.+.. ..
T Consensus 44 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 121 (237)
T 3sob_L 44 ITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG--SGTDFTLTISSLQPEDFATYYCQQSYTTPPTF 121 (237)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEc--CCCEEEEEECCCChhhCeEEEEeeccCCceEE
Confidence 689999998 99999985422 112211 111 12356888774 3468899999999999999999995433 23
Q ss_pred eEEEEEEEEcCCCceEe--e-------CCCeEEEecCCC---C-ceeEEEEeCCCeEEE-----ec-C--CCC---ceEE
Q psy3125 73 NMAIMLNVDDRGRGARL--S-------AGPLLNFAFPDL---L-TTNIYTYTGDARFSV-----IH-P--QNS---DEWN 128 (163)
Q Consensus 73 ~~~~~l~V~~~~~~~~v--~-------~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~-----~~-~--~~~---~~~~ 128 (163)
...+.|.|......+.+ . .|..+.+.|... + .+.+.|++++..+.. .. . ... ....
T Consensus 122 ~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~ 201 (237)
T 3sob_L 122 GQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSST 201 (237)
T ss_dssp CCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEE
T ss_pred cCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEE
Confidence 34456777553222222 1 245688888632 2 468899987654321 11 1 111 1356
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
|.|..+..+|+|.|+|.| |..........
T Consensus 202 L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 202 LTLSKADYEKHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp EEEEHHHHTTCCEEEEEEECTTCSSCEEEE
T ss_pred EEEcHHHccCCCcEEEEEeeCCCCCceeee
Confidence 999999999999999999 76654444333
No 111
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.75 E-value=8.2e-18 Score=119.05 Aligned_cols=150 Identities=16% Similarity=0.182 Sum_probs=103.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCe-eEEEEeeCCCCe--eEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAG-IYECQVNTEPKM--NMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~~~~~~~~--~~~~ 76 (163)
|.|.+.+.+ +.|.|+++++..+ ..+.++.+.. +..|.|.+++.+|+| .|+|.+.+.... +..+
T Consensus 111 l~C~~~~p~~~~v~W~~~~g~~l--------~~~~~~~~~~-----~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~ 177 (290)
T 2o26_X 111 VRCPLTDPQVSQYSLIECDGKSL--------PTDLTFVPNP-----KAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKF 177 (290)
T ss_dssp ECCCBSCCSCEEEEEEETTSCCC--------CTTCEEEEET-----TTEEEEESCCGGGTTCEEEEEEEETTEEEECCCE
T ss_pred EeCcCCCCCCceEEEEeCCCcCC--------CCCCceeeCC-----CCCEEEecccHHHCCCEEEEEEEECCceEEeEEE
Confidence 579999866 8999976443322 2235555553 236999999999999 999999554322 3356
Q ss_pred EEEEEc----C------CCceEeeCCCeEEEecCC--CCcee-EEEEeCCCeE----EEec------C-CCCceEEEEec
Q psy3125 77 MLNVDD----R------GRGARLSAGPLLNFAFPD--LLTTN-IYTYTGDARF----SVIH------P-QNSDEWNMKID 132 (163)
Q Consensus 77 ~l~V~~----~------~~~~~v~~~~~~~~~~~~--~~~~~-~~~~~~~~~~----~~~~------~-~~~~~~~L~i~ 132 (163)
.|.|.. + +....+..|..+.+.|.. .+.+. +.|++++... .... . .......|.|.
T Consensus 178 ~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 257 (290)
T 2o26_X 178 TLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTIS 257 (290)
T ss_dssp EEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEES
T ss_pred EEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEc
Confidence 777762 1 122345678889999963 33443 8999887763 1111 0 11234679999
Q ss_pred ccCcCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 133 YAQKRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 133 ~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
+++.+|+|.|+|.| |..|..+..+.|.|..+
T Consensus 258 ~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 258 SARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp SCCSSSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred CCCcccCeEEEEEEeCCCCcEEEEEEEEEEeC
Confidence 99999999999999 99999999999998764
No 112
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.75 E-value=1.1e-16 Score=113.11 Aligned_cols=153 Identities=20% Similarity=0.271 Sum_probs=102.0
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--CeeEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~~~~~ 76 (163)
|.|.+.+.+ +.|.|+|.++..+. ....|+.+... +....+|.|.+++.+|+|.|+|.+.+.. ..+..+
T Consensus 22 l~C~~~~~~~~~~i~W~~~~g~~~~-------~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~ 93 (291)
T 1qz1_A 22 FLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWN-DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATV 93 (291)
T ss_dssp EEEEESSCCSCCEEEEECTTSCBCC-------SSCSSEEEEEE-ETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEE
T ss_pred EEEEeCCCCCCcEeEEECCCCeECc-------cCCceEEEEEc-CCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEE
Confidence 689999976 89999974333222 12456665532 2357889999999999999999995533 345666
Q ss_pred EEEEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC---CCceEEEEecccCcCCCeeEEEE
Q psy3125 77 MLNVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 77 ~l~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
.|.|..+ +....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.|+|.
T Consensus 94 ~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 173 (291)
T 1qz1_A 94 NVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCE 173 (291)
T ss_dssp EEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred EEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEE
Confidence 7777654 234457788889999963 445678999886543211000 01123599999999999999999
Q ss_pred c-CCCCC--ccEEEEEEEe
Q psy3125 146 V-NTEPK--MNMAIMLNVD 161 (163)
Q Consensus 146 a-~~~~~--~~~~~~L~V~ 161 (163)
| +..+. .+..+.|.|.
T Consensus 174 a~n~~~~~~~~~~~~l~v~ 192 (291)
T 1qz1_A 174 GRILARGEINFKDIQVIVN 192 (291)
T ss_dssp EEEGGGTEEEEEEEEEEEE
T ss_pred EEecCCCceeeEEEEEEEe
Confidence 9 54432 2345555553
No 113
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.75 E-value=3.9e-17 Score=127.09 Aligned_cols=142 Identities=15% Similarity=0.189 Sum_probs=104.8
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC-eeEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK-MNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~-~~~~~~l 78 (163)
|.|.+.+.++.+.|+| ++.. +....|+.+.. ++.+|.|.+++.+|+|.|+|.+.+ .+. .+..+.|
T Consensus 487 l~C~~~~~~~~i~W~~--~g~~-------l~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 553 (642)
T 1e07_A 487 FTCEPEAQNTTYLWWV--NGQS-------LPVSPRLQLSN----GNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTL 553 (642)
T ss_pred EEEECCCCCcEEEEEE--CCEe-------CCCCCcEEEcC----CCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEE
Confidence 5799995339999998 3222 23345666553 245899999999999999999954 333 3445778
Q ss_pred EEEcCCC-------ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 79 NVDDRGR-------GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 79 ~V~~~~~-------~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
.|..++. ...+..|..+.+.|.. .+.+.+.|++++..+. . ...|.|.+++.+|+|.|+|.| |.
T Consensus 554 ~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~--~-----~~~L~i~~~~~~d~G~Y~C~a~N~ 626 (642)
T 1e07_A 554 DVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQ--H-----TQVLFIAKITPNNNGTYACFVSNL 626 (642)
T ss_pred EEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECc--c-----CceEEECcccccCCeEEEEEEEec
Confidence 8875432 3356678889999963 4556889998876432 1 235999999999999999999 99
Q ss_pred CCCccEEEEEEEec
Q psy3125 149 EPKMNMAIMLNVDG 162 (163)
Q Consensus 149 ~~~~~~~~~L~V~~ 162 (163)
.|..+.++.|.|+.
T Consensus 627 ~G~~~~s~~l~V~v 640 (642)
T 1e07_A 627 ATGRNNSIVKSITV 640 (642)
T ss_pred ccCcceeEEEEEEE
Confidence 99998888888864
No 114
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.75 E-value=2.4e-17 Score=108.78 Aligned_cols=146 Identities=12% Similarity=0.120 Sum_probs=94.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEec----CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYT----GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMA 75 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~ 75 (163)
|.|.+.. | +.|.|+|.+. .+......... ..+|+.+.. .+.+|.|.+++.+|+|.|+|++.+... ...
T Consensus 15 L~c~~~~-~~~~i~W~~~~~-~i~~~~~~~~~~~~~~~~R~~~~~----~~~sL~I~~v~~~DsG~Y~C~~~n~~~-~~~ 87 (171)
T 1ccz_A 15 FHVPSNV-PLKEVLWKKQKD-KVAELENSEFRAFSSFKNRVYLDT----VSGSLTIYNLTSSDEDEYEMESPNITD-TMK 87 (171)
T ss_dssp ECCCCSS-CCSCEEEEETTE-EEEEEETTEEEECGGGTTSEEECT----TTCCEEECSCCGGGCEEEEEECTTCCS-CEE
T ss_pred EcCCCCC-CcceEEEEeCCc-EEEEEcCCCcccccccCCcEEEeC----CCCeEEECCCChhhCceEEEEEeCCCC-cEE
Confidence 5788854 6 9999998432 23222111111 234666542 356799999999999999999954333 777
Q ss_pred EEEEEEcCCCceEeeC-CCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 76 IMLNVDDRGRGARLSA-GPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 76 ~~l~V~~~~~~~~v~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
+.|.|.+++..+.+.. .....+.|.. .+.+.+.|++++..+.... ...|.+. ..+|+|.|+|.| |..+.
T Consensus 88 ~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~-----~~~l~~~--~~~~~g~Y~C~a~N~~~~ 160 (171)
T 1ccz_A 88 FFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR-----QKTMSYQ--WTNLRAPFKCKAVNRVSQ 160 (171)
T ss_dssp EEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEES-----SSEEEEE--CSCCSSCEEEEEEETTEE
T ss_pred EEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCc-----ceEEEEe--ccCCCceEEEEEEcccCc
Confidence 8899987754443321 1223577753 3567889998877654322 1124444 478999999999 88888
Q ss_pred ccEEEEEEE
Q psy3125 152 MNMAIMLNV 160 (163)
Q Consensus 152 ~~~~~~L~V 160 (163)
.+..+.|..
T Consensus 161 ~~~~~~l~c 169 (171)
T 1ccz_A 161 ESEMEVVNC 169 (171)
T ss_dssp EEEEECCCC
T ss_pred ccceeEEeC
Confidence 777776643
No 115
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.75 E-value=4.2e-17 Score=114.58 Aligned_cols=144 Identities=16% Similarity=0.297 Sum_probs=90.4
Q ss_pred CceEEecCC------CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG------RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.+.+ ..+........ .++||.+.. ..+.++|.|.+++.+|+|.|.|.+.+.
T Consensus 35 L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 112 (268)
T 1x9q_A 35 ISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG--SGTDFTLKINRVEAEDLGVYFCSQSTH 112 (268)
T ss_dssp EEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred EEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc--CCCEEEEEECCCChhHCEEEEEEEecC
Confidence 679998775 78999986432 12221111111 256888764 345789999999999999999999553
Q ss_pred CC--eeEEEEEEEEcCC-----------------------------CceEeeCCCeEEEecCCC--C--ceeEEEEeCC-
Q psy3125 70 PK--MNMAIMLNVDDRG-----------------------------RGARLSAGPLLNFAFPDL--L--TTNIYTYTGD- 113 (163)
Q Consensus 70 ~~--~~~~~~l~V~~~~-----------------------------~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~~- 113 (163)
.. ....+.|.|...+ ....+..|..+.+.|... + ...+.|++..
T Consensus 113 ~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~ 192 (268)
T 1x9q_A 113 VPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSP 192 (268)
T ss_dssp SSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEET
T ss_pred CCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccccEEEEEEeCC
Confidence 21 2233456555321 123456788899999642 2 2578887642
Q ss_pred -C-------------------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 114 -A-------------------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 114 -~-------------------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
. |+.+.........+|.|.+++.+|+|.|+|.|
T Consensus 193 ~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a 251 (268)
T 1x9q_A 193 EKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTG 251 (268)
T ss_dssp TTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 2 11111111112467999999999999999999
No 116
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.75 E-value=1.8e-17 Score=117.19 Aligned_cols=150 Identities=16% Similarity=0.241 Sum_probs=97.9
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CC-eeEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PK-MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~-~~~~~ 76 (163)
|.|.+.+.+ +.|.|++.++..+ ....++.+.. +.+|.|.+++.+|+|.|+|.+.+. +. .+..+
T Consensus 109 l~C~~~~~~~~~~v~W~~~~~~~~--------~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~ 175 (292)
T 4dkd_C 109 LPCLLTDPVLEAGVSLVRVRGRPL--------MRHTNYSFSP-----WHGFTIHRAKFIQSQDYQCSALMGGRKVMSISI 175 (292)
T ss_dssp CCEEESSGGGGSSEEEEEGGGCCC--------CSSCCEECCS-----SSCCEETTCCGGGCSEEEEEECSTTSCEECCCE
T ss_pred EeeeCCCCCcceeEEEEecCCCcc--------ccCCcccccC-----CceEEECCCCHHHCeEEEEEEEeCCCceeEEEE
Confidence 689999854 7899998432222 2234444332 233999999999999999999543 32 24467
Q ss_pred EEEEEc----CC------CceEeeCCCeEEEecCCC--C-ceeEEEEeCCCeEEE------ecCCCCceEEEEecccCcC
Q psy3125 77 MLNVDD----RG------RGARLSAGPLLNFAFPDL--L-TTNIYTYTGDARFSV------IHPQNSDEWNMKIDYAQKR 137 (163)
Q Consensus 77 ~l~V~~----~~------~~~~v~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~------~~~~~~~~~~L~i~~v~~~ 137 (163)
.|.|.. ++ ....+..|..+.+.|... + .....|+.++..+.. ..........|.|.+++.+
T Consensus 176 ~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (292)
T 4dkd_C 176 RLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQ 255 (292)
T ss_dssp EEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTT
T ss_pred EEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChh
Confidence 788875 22 122335678888888632 2 233445555432211 1111112357999999999
Q ss_pred CCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 138 DAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 138 D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
|+|.|+|.| |..|..+..+.|.|.++
T Consensus 256 d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 256 HAGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp SCEEEEEEEECSSCEEEEEEEECC---
T ss_pred cCeEEEEEEecCCCCceeEEEEEEeeC
Confidence 999999999 99999999999999764
No 117
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=8.3e-19 Score=126.38 Aligned_cols=147 Identities=21% Similarity=0.324 Sum_probs=56.4
Q ss_pred CceEEecC-C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+. | +.|.|+| ++..+ ....|+.+. +.+|.|.+++.+|+|.|+|.+.+.+.....+.|
T Consensus 28 l~C~~~~~~p~~~v~W~k--~g~~~-------~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l 92 (334)
T 1ry7_B 28 LSCPPPGGGPMGPTVWVK--DGTGL-------VPSERVLVG------PQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSV 92 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeeCCCCCCCcceEEEE--CCeeC-------CCcccEEec------cceEEEeecccccCEEEEEEEEeCCeEEEEEEE
Confidence 68999987 5 8999998 22222 223455432 457999999999999999999544545556666
Q ss_pred EEEcCCC--------------------------------ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC---
Q psy3125 79 NVDDRGR--------------------------------GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP--- 121 (163)
Q Consensus 79 ~V~~~~~--------------------------------~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--- 121 (163)
.|...+. ...+..|..+.+.|.. .+...+.|++++..+.....
T Consensus 93 ~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~ 172 (334)
T 1ry7_B 93 RVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGG 172 (334)
T ss_dssp --------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTC
T ss_pred EEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccc
Confidence 6654311 1346678889999974 34567889888764432111
Q ss_pred --CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 122 --QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 122 --~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.......|.|.+++.+|+|.|+|.| |..+..+..+.|.|..
T Consensus 173 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 216 (334)
T 1ry7_B 173 IKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLE 216 (334)
T ss_dssp CCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEEC
T ss_pred eecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEec
Confidence 1123457999999999999999999 8888888888888864
No 118
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.74 E-value=1.1e-18 Score=126.96 Aligned_cols=150 Identities=10% Similarity=0.097 Sum_probs=103.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCe-eEEEEee-CCCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAG-IYECQVN-TEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~~~-~~~~~~~~~~ 77 (163)
|.|.+.+.| +.|.|++.+...... . .+. ......+|.|.+++.+|+| .|+|.+. ..+..+..+.
T Consensus 178 L~C~~~g~p~p~i~W~~~~~~~~~~-~-------~~~-----~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~ 244 (347)
T 2ifg_A 178 LRCQVEGRGLEQAGWILTELEQSAT-V-------MKS-----GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQ 244 (347)
T ss_dssp EEEEEECSSCCCCCEEESCCCSSEE-E-------CCC-----CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEEC
T ss_pred EEEEEecCCCCEEEEEcCCceeecc-c-------ccc-----eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEE
Confidence 579999999 999999843221111 0 010 1235778999999999999 9999994 3444455556
Q ss_pred EEEEcCCC--ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEe--------c---CCCCceEEEEecccCcCCCeeE
Q psy3125 78 LNVDDRGR--GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVI--------H---PQNSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 78 l~V~~~~~--~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~L~i~~v~~~D~G~Y 142 (163)
|.|..++. ......|..+.+.|.. .+.+.+.|++++..+... . ........|.|.+++.+|+|.|
T Consensus 245 l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 324 (347)
T 2ifg_A 245 VNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 324 (347)
T ss_dssp CCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEE
T ss_pred EEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceE
Confidence 66654433 1123346778888863 455688998776533211 0 0012356799999999999999
Q ss_pred EEEc-CCCCCccEEEEEEEecC
Q psy3125 143 ECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 143 ~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
+|.| |..|..+..+.|.|.++
T Consensus 325 ~C~a~N~~G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 325 TLLAANPFGQASASIMAAFMDN 346 (347)
T ss_dssp EEEEEETTEEEEEEEEECSCCC
T ss_pred EEEEecCCCceeeEEEEEecCC
Confidence 9999 99999999999998763
No 119
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.74 E-value=2e-16 Score=111.65 Aligned_cols=151 Identities=19% Similarity=0.287 Sum_probs=100.1
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe-eEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM-NMAIML 78 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~-~~~~~l 78 (163)
|.|.+.+.|+.|.|+|.++..+ ....|+.+... ....+|.|.+++.+|+|.|+|.+.+ .+.. +..+.|
T Consensus 24 l~C~~~~~p~~v~W~~~~g~~~--------~~~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l 93 (291)
T 2wim_A 24 FTCTAIGEPESIDWYNPQGEKI--------ISTQRVVVQKE--GVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 93 (291)
T ss_dssp EEEEEESCCSEEECBCTTCCBC--------CCBTTEEEEEE--TTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEeCCCCceEEECCCCcCc--------cCCCcEEEecC--CCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEE
Confidence 6899999888899997433322 23456666542 3467899999999999999999954 3332 456677
Q ss_pred EEEcCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC---CCceEEEEecccCcCCCeeEEEEc-
Q psy3125 79 NVDDRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 79 ~V~~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
.|..++ ....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.|+|.|
T Consensus 94 ~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 173 (291)
T 2wim_A 94 EIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGR 173 (291)
T ss_dssp EEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEE
T ss_pred EecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEE
Confidence 776553 33457788899999974 345678898876543211100 011235999999999999999999
Q ss_pred CCCCCc--cEEEEEEEe
Q psy3125 147 NTEPKM--NMAIMLNVD 161 (163)
Q Consensus 147 ~~~~~~--~~~~~L~V~ 161 (163)
+..+.. ...+.|.|.
T Consensus 174 n~~~~~~~~~~~~~~v~ 190 (291)
T 2wim_A 174 VEARGEIDFRDIIVIVN 190 (291)
T ss_dssp ETTTTEEEEEEEEEEEE
T ss_pred ECCCCeeEEeeEEEEec
Confidence 655432 345555554
No 120
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.74 E-value=2.6e-17 Score=113.09 Aligned_cols=161 Identities=11% Similarity=0.166 Sum_probs=98.6
Q ss_pred CceEEecCC---CcEEEEEecCC-ee--E-E-e--cc-eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL-HI--L-T-T--NI-YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~-~~--~-~-~--~~-~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+ .+ + . . +. ..+. ..+|+.+..+...++++|.|.+++.+|+|.|.|++.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 99 (227)
T 1mju_H 20 LSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANK 99 (227)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEEC
Confidence 689999875 88999996532 11 1 1 1 11 1111 247998876444568899999999999999999995
Q ss_pred CCC--CeeEEEEEEEEcC---CCce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEecC-----CC--C
Q psy3125 68 TEP--KMNMAIMLNVDDR---GRGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVIHP-----QN--S 124 (163)
Q Consensus 68 ~~~--~~~~~~~l~V~~~---~~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~-----~~--~ 124 (163)
+.. .....+.|.|... .+.+ .+..|..+.+.|... +.. .+.|++++..+..... .+ .
T Consensus 100 ~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~ 179 (227)
T 1mju_H 100 LGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT 179 (227)
T ss_dssp ETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEE
T ss_pred CCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEE
Confidence 432 1223456777642 1111 223467788888642 333 7888877653211000 01 1
Q ss_pred ceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 125 DEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 125 ~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
....|.|.++..+| |.|+|.| |..........+.+.+
T Consensus 180 ~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~ 217 (227)
T 1mju_H 180 LSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRG 217 (227)
T ss_dssp EEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCC
T ss_pred EEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCC
Confidence 23469999999988 9999999 7655555666665554
No 121
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.74 E-value=4.5e-17 Score=116.02 Aligned_cols=134 Identities=15% Similarity=0.225 Sum_probs=92.2
Q ss_pred ceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 2 ACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 2 ~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
.|.+. +.| +.|.|+| ++ ..+..+.|+.+.. ..+..+|.|.+++.+|+|.|+|.+.+.......+.|.
T Consensus 22 ~~~~~~~~p~~~v~W~k--~~-------~~i~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~ 90 (312)
T 2y23_A 22 NFECDKMTPKSEFSWSK--DY-------VSTEDSPRLEVES--KGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLID 90 (312)
T ss_dssp EEECSSCCTTCCEEEEE--TT-------EECTTCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEEC
T ss_pred EEEEeCCCCCcEEEEEE--CC-------EECCCCCCEEEEE--eCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEE
Confidence 45554 567 9999998 32 2233466887775 2356799999999999999999995432233344555
Q ss_pred EEc------------CC-------CceEeeCCCeEEEecCC---CCceeEEEEeCCCeE------EEecCCCCceEEEEe
Q psy3125 80 VDD------------RG-------RGARLSAGPLLNFAFPD---LLTTNIYTYTGDARF------SVIHPQNSDEWNMKI 131 (163)
Q Consensus 80 V~~------------~~-------~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i 131 (163)
|.. ++ ....+..|..+.+.|.. .+.+.+.|++++..+ .+..........|.|
T Consensus 91 v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i 170 (312)
T 2y23_A 91 EEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFM 170 (312)
T ss_dssp HHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEE
T ss_pred EeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEE
Confidence 532 21 13456678888999963 366788999876543 222222234566999
Q ss_pred cccCcCCCeeEEEEc
Q psy3125 132 DYAQKRDAGIYECQV 146 (163)
Q Consensus 132 ~~v~~~D~G~Y~C~a 146 (163)
.+++.+|+|.|+|.|
T Consensus 171 ~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 171 EKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCCCGGGCEEEEEEE
T ss_pred ccCCcccCEeEEEEE
Confidence 999999999999999
No 122
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.74 E-value=7.1e-17 Score=112.30 Aligned_cols=136 Identities=20% Similarity=0.304 Sum_probs=99.9
Q ss_pred CceEEecCC-C-cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-R-PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~-~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.+ + .+.|+| ++..+. ....+|.|.+++.+|+|.|+|.+.+. ..+..+.|
T Consensus 21 l~C~~~~~~~~~~~~W~~--~g~~~~-------------------~~~~~l~i~~~~~~d~G~Y~C~~~~~-~~s~~~~l 78 (262)
T 3rjd_A 21 LHCEVLHLPGSSSTQWFL--NGTATQ-------------------TSTPSYRITSASVNDSGEYRCQRGLS-GRSDPIQL 78 (262)
T ss_dssp EEEECSSCCCTTCEEEEE--TTEECS-------------------CCSSEEEESSCCGGGCEEEEEEESSS-CCCCCEEE
T ss_pred EEEECCCCCCCceEEEEE--CCEEee-------------------ccCCeEEEecCCcccCeEEEEEEecC-CccccEEE
Confidence 679999998 5 999998 322211 12346999999999999999999542 23445667
Q ss_pred EEEcCC-----CceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDRG-----RGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~~-----~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..++ ....+..|..+.+.|.. .+...+.|++++..+..... ...|.|.+++.+|+|.|+|.| +..
T Consensus 79 ~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~n~~ 154 (262)
T 3rjd_A 79 EIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHW----NSNLTILKTNISHNGTYHCSGMGKH 154 (262)
T ss_dssp EEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEE----CCCEEESSCCGGGCEEEEEEEESSS
T ss_pred EEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCC----CCeEEEEECChhhCEEEEEEEeCCC
Confidence 776542 23456678889999964 34568899988776654321 234999999999999999999 777
Q ss_pred CCccEEEEEEEec
Q psy3125 150 PKMNMAIMLNVDG 162 (163)
Q Consensus 150 ~~~~~~~~L~V~~ 162 (163)
+..+..+.|.|..
T Consensus 155 ~~~~~~~~l~V~~ 167 (262)
T 3rjd_A 155 RYTSAGISVTVKE 167 (262)
T ss_dssp EEEEECEEEEEEC
T ss_pred CccccceEEEecc
Confidence 7777888888764
No 123
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.74 E-value=1.1e-16 Score=109.60 Aligned_cols=156 Identities=9% Similarity=0.153 Sum_probs=98.0
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Eecc----eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TTNI----YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~~~----~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.+ +.|.|+|.+.+. .+ .... ..+ ...+||.+..+...++++|.|.+++.+|+|.|.|++.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 99 (223)
T 1dee_B 20 LSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKV 99 (223)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 689999875 889999965321 11 1110 111 1247999876544568899999999999999999996
Q ss_pred CCC-------CeeEEEEEEEEcC---CCceE-------eeCCCeEEEecCCC---Cce-eEEEEe-CCCeEEE-e--c--
Q psy3125 68 TEP-------KMNMAIMLNVDDR---GRGAR-------LSAGPLLNFAFPDL---LTT-NIYTYT-GDARFSV-I--H-- 120 (163)
Q Consensus 68 ~~~-------~~~~~~~l~V~~~---~~~~~-------v~~~~~~~~~~~~~---~~~-~~~~~~-~~~~~~~-~--~-- 120 (163)
+.. .....+.|.|... ++.+. +..|..+.+.|... +.+ .+.|++ ++..+.. . .
T Consensus 100 ~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~ 179 (223)
T 1dee_B 100 KFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSV 179 (223)
T ss_dssp SSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCE
T ss_pred ccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCcc
Confidence 542 1223457888742 11121 13567788888632 333 788998 5543210 0 0
Q ss_pred -CCC--CceEEEEecccCc--CCCeeEEEEc-CCCCCccEEE
Q psy3125 121 -PQN--SDEWNMKIDYAQK--RDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 121 -~~~--~~~~~L~i~~v~~--~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
... .....|.|..... +|.|.|+|.| +..+.....+
T Consensus 180 ~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 180 LRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred ccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 011 1134588988876 8999999999 7766554433
No 124
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.73 E-value=2.9e-18 Score=122.42 Aligned_cols=145 Identities=14% Similarity=0.185 Sum_probs=93.9
Q ss_pred CceEEecC-C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|.+.+. | +.|.|+| ++..+ ..+.++.+. .+..+|.|.+++.+|+|.|+|.+.+ .+.....+.
T Consensus 26 l~C~~~~~~p~~~v~W~~--~~~~~-------~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 92 (317)
T 2y25_A 26 LKCKVANIKKETHIVWYK--DEREI-------SVDEKHDFK----DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 92 (317)
T ss_dssp EEEEEESCCTTCEEEEEE--TTEEE-------CCSCC---------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEEC
T ss_pred EEEEEcCCCCCCEEEEEE--CCeEc-------CCCCcEEEE----CCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEE
Confidence 67999998 6 9999998 33222 234455443 2467899999999999999999954 333344444
Q ss_pred EEEEcCC------CceEeeCCCeEEEecCC------------CCceeEEEEeCCCeE------EEecCCCCceEEEEecc
Q psy3125 78 LNVDDRG------RGARLSAGPLLNFAFPD------------LLTTNIYTYTGDARF------SVIHPQNSDEWNMKIDY 133 (163)
Q Consensus 78 l~V~~~~------~~~~v~~~~~~~~~~~~------------~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i~~ 133 (163)
|.|...+ ....+..|..+.+.|.. .+...+.|++++..+ .+.. ......|.|.+
T Consensus 93 l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~ 170 (317)
T 2y25_A 93 LVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGV--TGEQIWLQINE 170 (317)
T ss_dssp CSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEE--CSSEEEEEEES
T ss_pred EEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEec--cCCEEEEEECc
Confidence 4433211 11122344555555543 245688898876543 2221 23356699999
Q ss_pred cCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 134 AQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 134 v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
++.+|+|.|+|.| |..+..+..+.|.|
T Consensus 171 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 198 (317)
T 2y25_A 171 PTPNDKGKYVMELFDGKTGHQKTVDLSG 198 (317)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred CCcccCeeEEEEEEeCCceEEEEEEEee
Confidence 9999999999999 88787777777654
No 125
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.73 E-value=1.6e-16 Score=108.51 Aligned_cols=149 Identities=9% Similarity=0.178 Sum_probs=95.0
Q ss_pred CceEEecCC---CcEEEEEecCCee---E-Eec-----ce-E--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEE
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHI---L-TTN-----IY-T--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 65 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~---~-~~~-----~~-~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 65 (163)
|.|.+.+.+ ..|.|+|...... + ... .. . ....+|+.+..+...+.++|.|.+++.+|+|.|.|.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~ 99 (221)
T 3m8o_H 20 LSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCV 99 (221)
T ss_dssp EEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCHHHCEEEEEE
Confidence 689999754 8999998643321 1 111 00 1 112479988764445688999999999999999999
Q ss_pred eeCCC---CeeEEEEEEEEcC-CCceEe--------eCCCeEEEecCCC---Cc--eeEEEEeCCCeEEEec------CC
Q psy3125 66 VNTEP---KMNMAIMLNVDDR-GRGARL--------SAGPLLNFAFPDL---LT--TNIYTYTGDARFSVIH------PQ 122 (163)
Q Consensus 66 ~~~~~---~~~~~~~l~V~~~-~~~~~v--------~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~------~~ 122 (163)
+.+.. .....+.|.|... ...+.+ ..|..+.+.|... +. ..+.|++++..+.... ..
T Consensus 100 ~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~ 179 (221)
T 3m8o_H 100 IRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDAS 179 (221)
T ss_dssp EESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSS
T ss_pred EECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCC
Confidence 95532 2344556777632 111111 2567788888632 22 4788887766443211 01
Q ss_pred CC---ceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 123 NS---DEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 123 ~~---~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.. ....|.|.++..+|+|.|+|.| +..
T Consensus 180 ~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~ 210 (221)
T 3m8o_H 180 GDLYTTSSQLTLPATQCLAGKSVTCHVKHYT 210 (221)
T ss_dssp SSCEEEEEEEEEEGGGSCTTCEEEEEEEETT
T ss_pred CCcEEEEEEEEECHHHcCCCCeEEEEEEECC
Confidence 11 1245999999999999999999 544
No 126
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.73 E-value=2e-17 Score=126.64 Aligned_cols=145 Identities=9% Similarity=0.069 Sum_probs=88.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ...++. ....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 346 L~C~~~g~P~p~i~W~k--~g~~l~-------~~~~~~------~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L 410 (527)
T 3qs9_E 346 FSVRFKAYPQIRCTWTF--SRKSFP-------CEQKGL------DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTL 410 (527)
T ss_dssp EEEEEEEESCCEEEEEE--TTEEEE-------CBCCBC------SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCEEEEEE--CCEECc-------CCcccc------cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 579999999 9999998 443332 122211 13567999999999999999999 555666777888
Q ss_pred EEEcCCCceEeeCCCeEEEecC--CCCceeEEEEeCCCeEEEe---------------cCCCCceEEEEecccCcCCCee
Q psy3125 79 NVDDRGRGARLSAGPLLNFAFP--DLLTTNIYTYTGDARFSVI---------------HPQNSDEWNMKIDYAQKRDAGI 141 (163)
Q Consensus 79 ~V~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~L~i~~v~~~D~G~ 141 (163)
.|..+|.......+ ..+.|. ..+.+.+.|++.+...... .........+.|.-...+|+|.
T Consensus 411 ~V~~~P~i~~~~~~--~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~ 488 (527)
T 3qs9_E 411 NIRRKPQVLAEASA--SQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFL 488 (527)
T ss_dssp C--CCCEEEECCCC--E---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCE
T ss_pred EEecCCeEEEeCCC--CEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEE
Confidence 88877532222222 245664 4556788998665422100 0011112233444344569999
Q ss_pred EEEEc-CCCCCccEEEEEEEec
Q psy3125 142 YECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 142 Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|+|.| |..|..+..+.|+|.+
T Consensus 489 Y~C~A~N~~G~~~~~~~L~V~~ 510 (527)
T 3qs9_E 489 VKCCAYNSLGTSCETILLNSPG 510 (527)
T ss_dssp EEEEEECSSCEEEEEEEC----
T ss_pred EEEEEEeCCCCceeEEEEecCC
Confidence 99999 9999999999998875
No 127
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.73 E-value=1e-16 Score=111.55 Aligned_cols=139 Identities=18% Similarity=0.228 Sum_probs=96.4
Q ss_pred CceEE-ecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACTV-MGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|.+ .+.| +.+.|+| ++..+... ..+..|.|.+++.+|+|.|+|.+.+ ....+..+.
T Consensus 102 l~C~~~~~~p~~~v~W~~--~g~~~~~~-----------------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 162 (262)
T 3rjd_A 102 LRCHAWKDKLVYNVLYYR--NGKAFKFF-----------------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGIS 162 (262)
T ss_dssp EEEEEGGGCCCEEEEEEE--TTEEEEEE-----------------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEE
T ss_pred EEEEccCCCCCceEEEEE--CCcccccc-----------------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceE
Confidence 57999 6677 8999998 33322110 0134599999999999999999954 444556677
Q ss_pred EEEEcCC--------CceEeeCCCeEEEecCCCCc---e----eEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeE
Q psy3125 78 LNVDDRG--------RGARLSAGPLLNFAFPDLLT---T----NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 78 l~V~~~~--------~~~~v~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 142 (163)
|.|.... ....+..|..+.+.|..... + ...|+.++..+.... ....|.|.+++.+|+|.|
T Consensus 163 l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y 238 (262)
T 3rjd_A 163 VTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN----TSSEYQILTARREDSGLY 238 (262)
T ss_dssp EEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEE----SCCEEEESSCCGGGCEEE
T ss_pred EEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccC----CCceEEEEEechhhCeEE
Confidence 8887631 12235668889999965321 1 356777776554322 234699999999999999
Q ss_pred EEEc-CCCCCc---cEEEEEEEec
Q psy3125 143 ECQV-NTEPKM---NMAIMLNVDG 162 (163)
Q Consensus 143 ~C~a-~~~~~~---~~~~~L~V~~ 162 (163)
+|.| |..|.. +..+.|.|+|
T Consensus 239 ~C~a~n~~G~~~~~s~~~~l~V~G 262 (262)
T 3rjd_A 239 WCEAATEDGNVLKRSPELELQVLG 262 (262)
T ss_dssp EEEEEETTSSCEEECCCEEECEEC
T ss_pred EEEEEcccCceEEecCCeEEEEeC
Confidence 9999 887765 5567787775
No 128
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.73 E-value=8.3e-17 Score=109.10 Aligned_cols=161 Identities=13% Similarity=0.124 Sum_probs=92.8
Q ss_pred CceEEecCC-C---cEEEEEecCCeeEEec--ceE-----ecCCCeEEEec-----cCCCCeEEEEEcccCcCCCeeEEE
Q psy3125 1 MACTVMGLG-R---PVSWMRKRDLHILTTN--IYT-----YTGDARFSVIH-----PQNSDEWNMKIDYAQKRDAGIYEC 64 (163)
Q Consensus 1 l~C~~~~~~-~---~v~W~k~~~~~~~~~~--~~~-----~~~~~r~~~~~-----~~~~~~~~L~i~~v~~~D~G~Y~C 64 (163)
|+|.+.+.+ + .|.|+|.+...+.... ... .....|+.+.. ....++++|.|.+++.+|+|.|.|
T Consensus 21 L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 100 (225)
T 4fmk_A 21 LPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRVEDEGNYTC 100 (225)
T ss_dssp ECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCGGGCEEEEE
T ss_pred EEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCHHHCcceEE
Confidence 689999877 4 4899985443332211 000 01123444322 112357789999999999999999
Q ss_pred EeeCCC--CeeEEEEEEEEcCCCce------EeeCCCeEEEecC---CCCceeEEEEeCCCeEEEe----cCCCC---ce
Q psy3125 65 QVNTEP--KMNMAIMLNVDDRGRGA------RLSAGPLLNFAFP---DLLTTNIYTYTGDARFSVI----HPQNS---DE 126 (163)
Q Consensus 65 ~~~~~~--~~~~~~~l~V~~~~~~~------~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~---~~ 126 (163)
++.+.. .......+.+..++... ....+....+.|. ..+.....|+.++...... ..... ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 180 (225)
T 4fmk_A 101 EFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTVTII 180 (225)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEE
T ss_pred EEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEecCCCEEEE
Confidence 995432 22333344554443211 1222333444442 2345667777765543211 11111 13
Q ss_pred EEEEecccCcCCCeeEEEEc-CCCCCcc--EEEEEEEe
Q psy3125 127 WNMKIDYAQKRDAGIYECQV-NTEPKMN--MAIMLNVD 161 (163)
Q Consensus 127 ~~L~i~~v~~~D~G~Y~C~a-~~~~~~~--~~~~L~V~ 161 (163)
+.|.|.+++.+|+|.|+|.| |..+... .++.|+|.
T Consensus 181 s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 181 SRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred EEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 46999999999999999999 7766554 45566654
No 129
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.73 E-value=7.4e-17 Score=109.30 Aligned_cols=151 Identities=13% Similarity=0.137 Sum_probs=95.5
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEe-cceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTT-NIYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~-~~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|.+.+.+ +.|.|+|.+.. ..+.. .... ....+||.+.. ..++++|.|.+++.+|+|.|.|.+.+.. ..
T Consensus 21 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 98 (213)
T 3r06_A 21 INCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG--SGRDSSFTISSLESEDIGSYYCQQYYNYPWTF 98 (213)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECSSSSCEE
T ss_pred EEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec--cCCEEEEEECCCCcccCEEEEEecccCCceEE
Confidence 689999998 99999985321 11211 1111 11356888774 3468899999999999999999995432 23
Q ss_pred eEEEEEEEEcCC--CceEe-------eCCCeEEEecCCC----CceeEEEEeCCCeEEE-----ec-CC--CC---ceEE
Q psy3125 73 NMAIMLNVDDRG--RGARL-------SAGPLLNFAFPDL----LTTNIYTYTGDARFSV-----IH-PQ--NS---DEWN 128 (163)
Q Consensus 73 ~~~~~l~V~~~~--~~~~v-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----~~-~~--~~---~~~~ 128 (163)
...+.|.|.... +.+.+ ..+..+.+.|... +...+.|++++..+.. .. .. .. ....
T Consensus 99 ~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~ 178 (213)
T 3r06_A 99 GPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSST 178 (213)
T ss_dssp CCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEE
T ss_pred cCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEE
Confidence 445567773321 11211 2355688888632 2357889988764421 10 11 11 1246
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
|.|.....+|+|.|+|.| |......
T Consensus 179 l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 179 LSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp EEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred EEeCHHHhccCCeEEEEEEecccCcc
Confidence 889999999999999999 6544333
No 130
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.73 E-value=2e-16 Score=108.13 Aligned_cols=152 Identities=9% Similarity=0.159 Sum_probs=97.8
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Eec---c-eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TTN---I-YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~~---~-~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+. .+ ... . ... ...+||.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 99 (220)
T 2fbj_H 20 LSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARL 99 (220)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 689999864 789999864321 12 111 0 111 1247999886434568899999999999999999995
Q ss_pred CCCC----eeEEEEEEEEcCC---CceE------eeCCCeEEEecCCC---Cc--eeEEEEeCCCeEEEecC-----CCC
Q psy3125 68 TEPK----MNMAIMLNVDDRG---RGAR------LSAGPLLNFAFPDL---LT--TNIYTYTGDARFSVIHP-----QNS 124 (163)
Q Consensus 68 ~~~~----~~~~~~l~V~~~~---~~~~------v~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~-----~~~ 124 (163)
+... ....+.|.|...+ +.+. +..|..+.+.|... +. ..+.|++++..+..... ..+
T Consensus 100 ~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g 179 (220)
T 2fbj_H 100 HYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGG 179 (220)
T ss_dssp ETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSS
T ss_pred ccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCC
Confidence 5332 2334577877531 1222 23567788888642 33 57889887765422110 111
Q ss_pred ---ceEEEEecccCcCCCeeEEEEc-CCCCCc
Q psy3125 125 ---DEWNMKIDYAQKRDAGIYECQV-NTEPKM 152 (163)
Q Consensus 125 ---~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~ 152 (163)
....|.|.++..+|+|.|+|.| +..+..
T Consensus 180 ~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~ 211 (220)
T 2fbj_H 180 RYTMSNQLTLPAVECPEGESVKCSVQHDSNPV 211 (220)
T ss_dssp CEEEEEEEEECGGGSCTTCEEEEEEEETTSCC
T ss_pred CEEEEEEEEECHHHcCCCCeEEEEEEcCCCce
Confidence 1235999999999999999999 665543
No 131
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.73 E-value=2.3e-17 Score=117.90 Aligned_cols=149 Identities=17% Similarity=0.182 Sum_probs=99.8
Q ss_pred CceEE------ecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-C-CCC
Q psy3125 1 MACTV------MGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-T-EPK 71 (163)
Q Consensus 1 l~C~~------~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~-~~~ 71 (163)
|.|.+ .+.| +.|.|+| ++..+.. ...++... +.+|.|.+++.+|+|.|+|.+. + .+.
T Consensus 123 l~C~~~~~~~~~g~p~~~i~W~k--~~~~l~~------~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 123 LVCPYMEFFKNENNELPKLQWYK--DCKPLLL------DNIHFSGV------KDRLIVMNVAEKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp EECSSCTTTCTTTTCCCCCEEEE--TTEECCC------CSSSEEEE------TTEEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred EEEecccccccCCCCCCEEEEEE--CCEECCC------ccceEeec------CceEEEEeceehhCcEEEEEEEcCCCCc
Confidence 57888 7888 9999998 3332211 12344322 2369999999999999999995 4 333
Q ss_pred e---eEEEEEEEEcC-----C-----C--ceEeeCCCeEEEecCC--CCceeEEEEeCCCeEE------------EecCC
Q psy3125 72 M---NMAIMLNVDDR-----G-----R--GARLSAGPLLNFAFPD--LLTTNIYTYTGDARFS------------VIHPQ 122 (163)
Q Consensus 72 ~---~~~~~l~V~~~-----~-----~--~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------------~~~~~ 122 (163)
. ...+.|.+... + . ...+..|..+.+.|.. .+.+.+.|++++..+. +....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~ 268 (315)
T 1itb_B 189 QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPA 268 (315)
T ss_dssp EEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSS
T ss_pred EEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccC
Confidence 2 33444444421 1 1 1245678888999863 3456788988754221 11100
Q ss_pred C----CceEEEEecccCcCC-CeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 123 N----SDEWNMKIDYAQKRD-AGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 123 ~----~~~~~L~i~~v~~~D-~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
. .....|.|.+++.+| +|.|+|.| |..|..+..+.|.|..+
T Consensus 269 ~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~~ 315 (315)
T 1itb_B 269 NKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPVT 315 (315)
T ss_dssp CGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCCC
T ss_pred CCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecCC
Confidence 0 123479999999999 99999999 99999999999998764
No 132
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.73 E-value=8.9e-17 Score=114.99 Aligned_cols=151 Identities=11% Similarity=0.015 Sum_probs=97.7
Q ss_pred ceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CC--CeeEEE
Q psy3125 2 ACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EP--KMNMAI 76 (163)
Q Consensus 2 ~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~--~~~~~~ 76 (163)
.|.+. +.| +.+.|+|. +..+..........++++.+. ..|.|..+..+|.|.|+|.+.+ .. .....+
T Consensus 138 ~C~~~~~~P~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~-------s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 209 (313)
T 4fqp_A 138 RCVSTGGRPPAQITWHSD-LGGMPNTSQVPGFLSGTVTVT-------SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTV 209 (313)
T ss_dssp EEEEEEEBSCCEEEEEET-TCCEEEEEEEECSSTTCEEEE-------EEEEECCCGGGTTCEEEEEEECTTSSSCEEEEE
T ss_pred EEEccCccCCcEEEeecC-Cccccccceeeeecccccccc-------eeeeecccccccCeeEEEEEEccCcCccceeee
Confidence 57655 677 99999983 222222222222223333322 2489999999999999999954 22 233444
Q ss_pred EEEEEcC-------CCceEeeCCCeEEEecCC--CCce-eEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 77 MLNVDDR-------GRGARLSAGPLLNFAFPD--LLTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 77 ~l~V~~~-------~~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
.|.|..+ .....+..|..+.+.|.. .+.+ .+.|++++..+.... ......|.|.+++.+|+|.|+|.|
T Consensus 210 ~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a 287 (313)
T 4fqp_A 210 NLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA--VAQGAQLLIRPVDKPINTTLICNV 287 (313)
T ss_dssp ECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE--EEETTEEEECCCSSCCEEEEEEEE
T ss_pred ecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce--EEeCCEEEECcCChhhCEEEEEEE
Confidence 4444332 222344567778898864 2334 578998876542100 011235999999999999999999
Q ss_pred -CCCCCccEEEEEEEec
Q psy3125 147 -NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 147 -~~~~~~~~~~~L~V~~ 162 (163)
|..|..+.++.|.|..
T Consensus 288 ~N~~G~~~~~~~l~V~~ 304 (313)
T 4fqp_A 288 TNALGARQAELTVQVKE 304 (313)
T ss_dssp ECSSCEEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEEe
Confidence 9999999999999975
No 133
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.73 E-value=3.9e-17 Score=110.64 Aligned_cols=152 Identities=12% Similarity=0.174 Sum_probs=95.0
Q ss_pred CceEEecCC---CcEEEEEecCCee----EEe---cceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHI----LTT---NIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~----~~~---~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.+.+.. ... +...+ ...+|+.+..+...++++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 99 (210)
T 3d9a_H 20 LTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWD 99 (210)
T ss_dssp EEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETT
T ss_pred EEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccCEEEEEEEec
Confidence 689999875 8999998643211 111 00111 12468888754334578999999999999999999965
Q ss_pred CCCeeEEEEEEEEcCC---Cce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEecC-----CC--CceE
Q psy3125 69 EPKMNMAIMLNVDDRG---RGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVIHP-----QN--SDEW 127 (163)
Q Consensus 69 ~~~~~~~~~l~V~~~~---~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~-----~~--~~~~ 127 (163)
.......+.|.|.... +.+ .+..|..+.+.|... +.+ .+.|++++........ .. ....
T Consensus 100 ~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s 179 (210)
T 3d9a_H 100 GDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSS 179 (210)
T ss_dssp SSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEE
T ss_pred CcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEE
Confidence 3333334567776321 111 123577888999642 334 7888877653111100 01 1234
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.|.|.++..+| |.|+|.| |..+...
T Consensus 180 ~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 180 SVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp EEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred EEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 69999999877 9999999 7666543
No 134
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.73 E-value=1.3e-16 Score=110.97 Aligned_cols=149 Identities=11% Similarity=0.147 Sum_probs=94.5
Q ss_pred CceEEecCC------CcEEEEEecCCe---eEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG------RPVSWMRKRDLH---ILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~~---~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.+.+. .+........ ..+||.+.. ..+..+|.|.+++.+|+|.|+|.+.+.
T Consensus 58 L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 135 (254)
T 2c1o_A 58 ISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG--SGTDFTLKISRVEAEDLGIYYCVQGSH 135 (254)
T ss_dssp EEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred EEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec--CCCEEEEEECcCCcccCEEEEEEEEcC
Confidence 689999887 789999854321 1111111111 236888765 345789999999999999999999553
Q ss_pred CC--eeEEEEEEEEcC--CCceEee-------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe------cCCCC----
Q psy3125 70 PK--MNMAIMLNVDDR--GRGARLS-------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI------HPQNS---- 124 (163)
Q Consensus 70 ~~--~~~~~~l~V~~~--~~~~~v~-------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~------~~~~~---- 124 (163)
.. ....+.|.|... ++.+.+. .|..+.+.|... +. ..+.|++++..+... .....
T Consensus 136 ~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~ 215 (254)
T 2c1o_A 136 FPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY 215 (254)
T ss_dssp SSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCE
T ss_pred cceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcE
Confidence 22 223345666542 2222221 255788999642 22 358899887643211 00111
Q ss_pred -ceEEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 125 -DEWNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 125 -~~~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
....|.|.++..+|+|.|+|.| |....
T Consensus 216 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 216 SMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp EEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred EEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 1457999999999999999999 66544
No 135
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.73 E-value=9.1e-17 Score=111.38 Aligned_cols=160 Identities=15% Similarity=0.175 Sum_probs=91.6
Q ss_pred CceEEecCC-Cc-----EEEEEecCCe---e-E-E-ecceEecCCCeEEEec-cCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG-RP-----VSWMRKRDLH---I-L-T-TNIYTYTGDARFSVIH-PQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~-~~-----v~W~k~~~~~---~-~-~-~~~~~~~~~~r~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.| +. |.|+|.+... + + . .+.......+|..+.. ....++++|.|.+++.+|+|.|+|++.
T Consensus 23 L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 102 (248)
T 3pv7_A 23 IFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRCEVV 102 (248)
T ss_dssp ECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGCEEEEEEEE
T ss_pred EeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHCeEEEEEEE
Confidence 689998887 54 9999853221 1 1 1 0111111111111111 012357789999999999999999995
Q ss_pred C-CCCeeEEEEEEEEcCCCceE-----eeCCCeEEEecCC---CCce-eEEEEeCCCeE-------------EEecCCCC
Q psy3125 68 T-EPKMNMAIMLNVDDRGRGAR-----LSAGPLLNFAFPD---LLTT-NIYTYTGDARF-------------SVIHPQNS 124 (163)
Q Consensus 68 ~-~~~~~~~~~l~V~~~~~~~~-----v~~~~~~~~~~~~---~~~~-~~~~~~~~~~~-------------~~~~~~~~ 124 (163)
+ .......+.|.|..++.... +..+..+.+.|.. .+.+ .+.|++++..+ ........
T Consensus 103 ~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~ 182 (248)
T 3pv7_A 103 VTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDG 182 (248)
T ss_dssp ETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTS
T ss_pred eCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCC
Confidence 4 33456677888887643211 2234456688853 2344 78999877421 11111111
Q ss_pred ---ceEEEEecccCcCCCeeEEEEc-CCCCC--ccEEEEEEE
Q psy3125 125 ---DEWNMKIDYAQKRDAGIYECQV-NTEPK--MNMAIMLNV 160 (163)
Q Consensus 125 ---~~~~L~i~~v~~~D~G~Y~C~a-~~~~~--~~~~~~L~V 160 (163)
....|.|..+..+|+|.|+|.| |..+. .+..+.|.|
T Consensus 183 ~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 183 TFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred CEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 2356999999999999999999 77665 455666666
No 136
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.73 E-value=8.6e-17 Score=107.95 Aligned_cols=145 Identities=10% Similarity=0.167 Sum_probs=93.2
Q ss_pred CceEEec-CC-CcEEEEEecCCeeEEe--cce----EecCC----CeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMG-LG-RPVSWMRKRDLHILTT--NIY----TYTGD----ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~-~~-~~v~W~k~~~~~~~~~--~~~----~~~~~----~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+ .+ +.|.|+|. +..+... +.. ....+ +|+.+. .+++|.|.+++.+|+|.|+|++.+
T Consensus 18 L~C~~~~~~~~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-----~~~sL~I~~v~~~D~G~Y~C~~~~ 91 (193)
T 2if7_A 18 LPLEFPAGEKVNFITWLFN-ETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-----QSYSLQLSNLKMEDTGSYRAQIST 91 (193)
T ss_dssp ECCCCCCCSCCCEEEEEET-TEEEEEEECCSSSCCEEEECCHHHHTTEEEC-----TTCCEEECSCCGGGCEEEEEEEEC
T ss_pred EeccCCCcccccEEEEEEC-CEEEEEEecccCCCCceeecCccccccEEEC-----CCeEEEECCCCcccCceEEEEEEe
Confidence 6798876 44 79999983 2222211 110 00112 366655 257799999999999999999955
Q ss_pred CC-CeeEEEEEEEEcCCCceEee-------CCC-eEEEecCC---CCceeEEEEeCCCeEEEecCCCCceEEEEecccCc
Q psy3125 69 EP-KMNMAIMLNVDDRGRGARLS-------AGP-LLNFAFPD---LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQK 136 (163)
Q Consensus 69 ~~-~~~~~~~l~V~~~~~~~~v~-------~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 136 (163)
.. .....+.|.|..++..+.+. .|. .+.+.|.. .+.+.+.|++++..+ .. ...|.|.....
T Consensus 92 ~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l--~~-----~~~l~i~~~~~ 164 (193)
T 2if7_A 92 KTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTL--SS-----QPNLTVSWDPR 164 (193)
T ss_dssp SSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEE--ES-----SSEEEEEECTT
T ss_pred cCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEc--CC-----CCeEEEEeccC
Confidence 33 34457788887764333222 333 68888963 235688999876533 11 12377865555
Q ss_pred C-CCeeEEEEc-CCCCCccEEEEE
Q psy3125 137 R-DAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 137 ~-D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
+ |+|.|+|.| |..+..+..+.+
T Consensus 165 ~~d~G~Y~C~a~N~~g~~s~~~~~ 188 (193)
T 2if7_A 165 ISSEQDYTCIAENAVSNLSFSVSA 188 (193)
T ss_dssp TCSCCEEEEEEEETTEEEEEEEEH
T ss_pred cCCCCcEEEEEECCCCcccccccc
Confidence 4 999999999 888877665543
No 137
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.72 E-value=2.2e-16 Score=108.82 Aligned_cols=161 Identities=12% Similarity=0.154 Sum_probs=99.2
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Eec---ceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TTN---IYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~~---~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ ..|.|+|.+.+ ..+ ... ...+. ..+|+.+..+...++++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 99 (232)
T 1dn0_B 20 LTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPP 99 (232)
T ss_dssp EEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEec
Confidence 689999763 88999996432 222 111 11111 2479988765445688999999999999999999963
Q ss_pred --C--C---CeeEEEEEEEEcC-C--CceE-------eeCC-CeEEEecCCC---Cc-eeEEEEe-CCCeEEE-ec----
Q psy3125 69 --E--P---KMNMAIMLNVDDR-G--RGAR-------LSAG-PLLNFAFPDL---LT-TNIYTYT-GDARFSV-IH---- 120 (163)
Q Consensus 69 --~--~---~~~~~~~l~V~~~-~--~~~~-------v~~~-~~~~~~~~~~---~~-~~~~~~~-~~~~~~~-~~---- 120 (163)
. . .....+.|.|... + +.+. +..| ..+.+.|... +. ..+.|+. ++..+.. ..
T Consensus 100 ~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~ 179 (232)
T 1dn0_B 100 HDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSV 179 (232)
T ss_dssp STTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCE
T ss_pred CCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCcc
Confidence 2 1 1234567888752 1 1111 1245 6788888632 33 3788998 5543321 00
Q ss_pred -CCC--CceEEEEecccCc--CCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 121 -PQN--SDEWNMKIDYAQK--RDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 121 -~~~--~~~~~L~i~~v~~--~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
... .....|.|.++.. +|.|.|+|.| +..+.......+.|.
T Consensus 180 ~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 180 LRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred ccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 011 1134689999887 8999999999 777776666555543
No 138
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.72 E-value=3e-17 Score=119.78 Aligned_cols=145 Identities=13% Similarity=0.125 Sum_probs=97.4
Q ss_pred CceEEec-----CC-CcEEEEEecCCeeEEecceEe-cCCCeEEEecc--------CCCCeEEEEEcccCcCCCeeEEEE
Q psy3125 1 MACTVMG-----LG-RPVSWMRKRDLHILTTNIYTY-TGDARFSVIHP--------QNSDEWNMKIDYAQKRDAGIYECQ 65 (163)
Q Consensus 1 l~C~~~~-----~~-~~v~W~k~~~~~~~~~~~~~~-~~~~r~~~~~~--------~~~~~~~L~i~~v~~~D~G~Y~C~ 65 (163)
|.|.+.+ .| +.|.|+|.+ ..+......+ ..+.++.+... ...+..+|.|.+++.+|+|.|+|.
T Consensus 196 l~C~~~~~~~~~~P~p~i~W~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 273 (363)
T 1wio_A 196 FSFPLAFTVEKLTGSGELWWQAER--ASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLT 273 (363)
T ss_dssp EECCCCCCCCSSCEEEEEEEEESS--CCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEE
T ss_pred EEEEEecccccCCCceeEEEecCC--CCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEE
Confidence 5798877 77 999999832 2111100000 11445544321 012355899999999999999999
Q ss_pred e-eC--CCCeeEEEEEEEEcCCCceEeeCCCeEEEecCC--CCcee--EEEEeCCCeEEEecCCCCceEEEEecccCcCC
Q psy3125 66 V-NT--EPKMNMAIMLNVDDRGRGARLSAGPLLNFAFPD--LLTTN--IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRD 138 (163)
Q Consensus 66 ~-~~--~~~~~~~~~l~V~~~~~~~~v~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 138 (163)
+ +. .+..+..+.|.|... .|..+.+.|.. .+.+. +.|++++..+.. ...|.|.+++.+|
T Consensus 274 a~n~~~~g~~~~~~~l~V~~v-------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~-------~~~l~i~~v~~~d 339 (363)
T 1wio_A 274 LALEAKTGKLHQEVNLVVMRA-------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV-------SKREKAVWVLNPE 339 (363)
T ss_dssp ECBTTTTCCEEEEEEEEEEEE-------CCCSSSEEEEEESSCCTTCCEEEECSSSSCSE-------EESSSEEEESSCC
T ss_pred EEEhhhcCeEEEEEeEEEEEe-------cCCCeeEEEEEccccCCCccEEEEeCCCceee-------eeeeeeeeecccc
Confidence 9 44 466777888888732 15667777752 23344 899988865432 2338899999999
Q ss_pred CeeEEEEcCCCCCccEEEEEEEe
Q psy3125 139 AGIYECQVNTEPKMNMAIMLNVD 161 (163)
Q Consensus 139 ~G~Y~C~a~~~~~~~~~~~L~V~ 161 (163)
+|.|+|.|...+....+..|.|.
T Consensus 340 ~G~Y~C~a~~~~~~~~~~~~~V~ 362 (363)
T 1wio_A 340 AGMWQCLLSDSGQVLLESNIKVL 362 (363)
T ss_dssp SEEEEEEECSSSSCCEEEEEEEC
T ss_pred ceeEEEEEecCCeEEEecceEec
Confidence 99999999666777788877763
No 139
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.72 E-value=4.2e-17 Score=110.80 Aligned_cols=153 Identities=12% Similarity=0.140 Sum_probs=95.9
Q ss_pred CceEEecC-C-CcEEEEEecC---CeeE-Eecc---eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRD---LHIL-TTNI---YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~---~~~~-~~~~---~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+. + +.|.|+|.+. ...+ .... .... ..+|+.+.. ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 20 L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 97 (218)
T 3s96_B 20 LTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS--SGADRYLSISNIQPEDEAIYICGVGDT 97 (218)
T ss_dssp EEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEEE
T ss_pred EEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec--CCceEEEEEccCCcccCEEEEEEEecC
Confidence 68999999 8 9999998532 1111 1111 0111 235888765 346889999999999999999999442
Q ss_pred C------CeeEEEEEEEEcCC---CceEe-------eCCCeEEEecCCC---Cce-eEEEEeCCCeEEEec------CCC
Q psy3125 70 P------KMNMAIMLNVDDRG---RGARL-------SAGPLLNFAFPDL---LTT-NIYTYTGDARFSVIH------PQN 123 (163)
Q Consensus 70 ~------~~~~~~~l~V~~~~---~~~~v-------~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~------~~~ 123 (163)
. .....+.|.|...+ +.+.+ ..+..+.+.|... +.. .+.|++++..+.... ...
T Consensus 98 ~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 177 (218)
T 3s96_B 98 IKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEG 177 (218)
T ss_dssp ETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC-------------
T ss_pred CCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccC
Confidence 2 23445678887532 22222 1345688888632 233 688998776443210 001
Q ss_pred C---ceEEEEecccCcCCCeeEEEEc-CCCCCccEE
Q psy3125 124 S---DEWNMKIDYAQKRDAGIYECQV-NTEPKMNMA 155 (163)
Q Consensus 124 ~---~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~ 155 (163)
. ....|.|..+..+|+|.|+|.| |..+.....
T Consensus 178 ~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 178 NKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp -CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 1 1234889999999999999999 766554443
No 140
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.71 E-value=3.2e-17 Score=111.04 Aligned_cols=152 Identities=14% Similarity=0.173 Sum_probs=97.2
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecce--EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---C
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIY--TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---K 71 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---~ 71 (163)
|.|.+. + +.|.|+|.+.. ..+..... .....+|+.+.. ..++++|.|.+++.+|+|.|.|++.+.. .
T Consensus 20 L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 95 (211)
T 3tv3_L 20 ISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK--SGNTASLTVSGLQTDDEAVYYCGSLVGNWDVI 95 (211)
T ss_dssp EEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE--ETTEEEEEEESCCGGGCEEEEEEEEETTTEEE
T ss_pred EEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc--cCCEEEEEECCCChhHCEEEEEEEecCCCcee
Confidence 679998 6 99999985321 11111111 011346887765 3468899999999999999999995432 3
Q ss_pred eeEEEEEEEEcC---CCceEee-------CCCeEEEecCCC----CceeEEEEeCCCeEEE---e----cCCCC---ceE
Q psy3125 72 MNMAIMLNVDDR---GRGARLS-------AGPLLNFAFPDL----LTTNIYTYTGDARFSV---I----HPQNS---DEW 127 (163)
Q Consensus 72 ~~~~~~l~V~~~---~~~~~v~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~----~~~~~---~~~ 127 (163)
....+.|.|... ++.+.+. .|..+.+.|... +...+.|++++..+.. . ..... ...
T Consensus 96 ~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s 175 (211)
T 3tv3_L 96 FGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASS 175 (211)
T ss_dssp ECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEE
T ss_pred ECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEE
Confidence 445567777732 1122222 377788999632 2467889987764421 0 00111 125
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
.|.|.++..+|+|.|+|.| +..+.....+
T Consensus 176 ~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 176 YLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred EEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 6999999999999999999 7665554444
No 141
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.71 E-value=1e-17 Score=121.36 Aligned_cols=147 Identities=12% Similarity=0.124 Sum_probs=77.0
Q ss_pred CceEE-----ecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-C-CCe
Q psy3125 1 MACTV-----MGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-E-PKM 72 (163)
Q Consensus 1 l~C~~-----~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~-~~~ 72 (163)
|.|.+ .+.| +.|.|+| ++..+ ....++... ..+|.|.+++.+|+|.|+|.+.+ . +..
T Consensus 140 l~C~~~~~~~~g~p~~~v~W~k--~~~~l-------~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~ 204 (349)
T 4dep_C 140 ITCPNVDGYFPSSVKPTITWYM--GCYKI-------QNFNNVIPE------GMNLSFLIALISNNGNYTCVVTYPENGRT 204 (349)
T ss_dssp EECCSCTTSSCTTSCCEEEEEE--TTEEC-------CSCSSEEEE------TTEEEEESCCGGGCEEEEEEEEEEETTEE
T ss_pred EEcCCCcccccCCCCceEEEee--CCEEC-------CCccceeec------CCEEEEeeeeecCCcEEEEEEEEeeCCEE
Confidence 46764 6778 9999998 33322 112233322 24699999999999999999944 2 332
Q ss_pred ---eEEEEEEEEcCC-----Cce---------EeeCCCeEEEecCCC------CceeEEEEeCCCeEEEe-cCC------
Q psy3125 73 ---NMAIMLNVDDRG-----RGA---------RLSAGPLLNFAFPDL------LTTNIYTYTGDARFSVI-HPQ------ 122 (163)
Q Consensus 73 ---~~~~~l~V~~~~-----~~~---------~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~------ 122 (163)
+..+.|.|..++ +.. .+..|..+.+.|... +.+.+.|++++..+... ...
T Consensus 205 ~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~ 284 (349)
T 4dep_C 205 FHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESI 284 (349)
T ss_dssp EEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEE
T ss_pred EEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccce
Confidence 566667776531 111 445566777888533 56788999887655431 000
Q ss_pred -----CC--ceEEEEecccCcCCC-eeEEEEc-CCCCCccEEEEEEEec
Q psy3125 123 -----NS--DEWNMKIDYAQKRDA-GIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 123 -----~~--~~~~L~i~~v~~~D~-G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.. ....|.|.+++.+|+ |.|+|.| |..|..+..+.|.|..
T Consensus 285 ~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 285 SHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp ECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred eeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 11 134499999999999 9999999 9999999988888753
No 142
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.71 E-value=4.6e-17 Score=116.11 Aligned_cols=151 Identities=11% Similarity=0.098 Sum_probs=98.0
Q ss_pred CceEE-ecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CC--CeeEE
Q psy3125 1 MACTV-MGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EP--KMNMA 75 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~--~~~~~ 75 (163)
|.|.+ .+.| +.|.|+|. +..+.. .... ..+..+.. ...|.|.++..+|.|.|+|.+.+ .. .....
T Consensus 134 l~C~~~~g~P~~~i~W~~~-~~~~~~-~~~~-~~~~~~~~-------~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 203 (308)
T 4fom_A 134 AICIAATGKPVAHIDWEGD-LGEMES-TTTS-FPNETATI-------ISQYKLFPTRFARGRRITCVVKHPALEKDIRYS 203 (308)
T ss_dssp EEEEEEEEBSCCEEEECCC-SSBCCE-EEEE-CTTSCEEE-------EEEEEECCCGGGTTCEEEEEEECTTCSSCEEEE
T ss_pred EEEEecCCcCCceEEEEEC-Cccccc-ccce-eeeecccc-------cccceEEeeeecCCccEEEEEEccCCCCceEEe
Confidence 46765 5788 99999973 222211 1111 11212111 23599999999999999999954 22 23344
Q ss_pred EEEEEEcC-------CCceEeeCCCeEEEecCC--CCce-eEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEE
Q psy3125 76 IMLNVDDR-------GRGARLSAGPLLNFAFPD--LLTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 76 ~~l~V~~~-------~~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
+.|.|..+ .....+..|..+.+.|.. .+.+ .+.|++++..+.. .........|.|.+++.+|+|.|+|.
T Consensus 204 ~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~-~~~~~~~~~l~i~~v~~~d~G~Y~C~ 282 (308)
T 4fom_A 204 FILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPD-GLLASDNTLHFVHPLTFNYSGVYICK 282 (308)
T ss_dssp EECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCS-SCBCSTTEEECCSCCCSCCCSEEEEE
T ss_pred EEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCC-cEEEcCCeEEEECCCChhhCEEEEEE
Confidence 45555433 223345567788899974 2334 5778887765431 11223345678999999999999999
Q ss_pred c-CCCCCccEEEEEEEec
Q psy3125 146 V-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 146 a-~~~~~~~~~~~L~V~~ 162 (163)
| |..|..+.++.|.|..
T Consensus 283 A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 283 VTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp EEETTEEEEEEEECCEEC
T ss_pred EEeCCCcEEEEEEEEEEc
Confidence 9 9999999999999875
No 143
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.71 E-value=8.1e-17 Score=109.82 Aligned_cols=156 Identities=13% Similarity=0.199 Sum_probs=97.6
Q ss_pred CceEEecCC---CcEEEEEecCCe----eEEec----c--eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEE
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH----ILTTN----I--YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 65 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~----~~~~~----~--~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 65 (163)
|.|.+.+.+ +.|.|+|.+.+. ++... . .... ..+|+.+..+...++++|.|.+++.+|+|.|.|.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 99 (220)
T 1pz5_B 20 LSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCT 99 (220)
T ss_dssp EEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCHHHCEEEEEE
Confidence 689999865 889999864321 11111 1 1111 1478888754334578999999999999999999
Q ss_pred eeCCC----CeeEEEEEEEEcCC---Cce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCe---EEEec--CC
Q psy3125 66 VNTEP----KMNMAIMLNVDDRG---RGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDAR---FSVIH--PQ 122 (163)
Q Consensus 66 ~~~~~----~~~~~~~l~V~~~~---~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~---~~~~~--~~ 122 (163)
+.+.. .....+.|.|.... +.+ .+..|..+.+.|... +.+ .+.|+.++.. ..... ..
T Consensus 100 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~ 179 (220)
T 1pz5_B 100 RGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQS 179 (220)
T ss_dssp EECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEET
T ss_pred EecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccC
Confidence 96543 12234667776321 111 123567888999642 444 7888877652 11100 01
Q ss_pred C--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 123 N--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 123 ~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
. .....|.|.++..+| |.|+|.| |..+.....+.
T Consensus 180 ~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 180 GFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp TEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 1 124569999998877 9999999 77776554443
No 144
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.71 E-value=2.2e-16 Score=113.50 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=105.3
Q ss_pred CceEEecC----C-CcEEEEEecCCee---EEec--c-eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-
Q psy3125 1 MACTVMGL----G-RPVSWMRKRDLHI---LTTN--I-YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV- 66 (163)
Q Consensus 1 l~C~~~~~----~-~~v~W~k~~~~~~---~~~~--~-~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~- 66 (163)
|.|.+.+. + +.|.|+|.++... .... . ... ...+|+.+.. ....+.+|.|.+++.+|+|.|+|.+
T Consensus 34 L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~ 112 (331)
T 3u83_A 34 LHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLR-PSFTDGTIRLSRLELEDEGVYICEFA 112 (331)
T ss_dssp ECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESS-CSSSBCCEEECSCCGGGCEEEEEEEE
T ss_pred EeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecc-cCCCCceEEEcccCcccCcEEEEEEE
Confidence 67998887 4 6899999532211 1100 0 011 1346777762 2345778999999999999999996
Q ss_pred e-CCCCeeEEEEEEEEcCCC--------ceEeeCC---CeEEEecC---CCCceeEEEEeCCCeEEE---ecCCCC---c
Q psy3125 67 N-TEPKMNMAIMLNVDDRGR--------GARLSAG---PLLNFAFP---DLLTTNIYTYTGDARFSV---IHPQNS---D 125 (163)
Q Consensus 67 ~-~~~~~~~~~~l~V~~~~~--------~~~v~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~---~ 125 (163)
. ..+.....+.|.|..++. ...+..| ..+.+.|. ..+.+.+.|+++...... ...... .
T Consensus 113 ~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
T 3u83_A 113 TFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV 192 (331)
T ss_dssp EETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE
T ss_pred ecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE
Confidence 3 244566777888887542 2345556 66888885 234568889875332211 111111 1
Q ss_pred eEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 126 EWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 126 ~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
...|.|.+++.+|+|.|+|.| |..+..+..+.|.|.
T Consensus 193 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 229 (331)
T 3u83_A 193 ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQ 229 (331)
T ss_dssp EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEE
T ss_pred EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEe
Confidence 356999999999999999999 887888888888775
No 145
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.71 E-value=4.6e-17 Score=117.56 Aligned_cols=151 Identities=15% Similarity=0.214 Sum_probs=102.9
Q ss_pred CceEEe-------cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCC
Q psy3125 1 MACTVM-------GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPK 71 (163)
Q Consensus 1 l~C~~~-------~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~ 71 (163)
|.|.+. +.| +.|.|+|.+....+. + ....|+... +.+|.|.+++.+|+|.|+|.+. ..+.
T Consensus 38 L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~-~----~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~~~n~~g~ 106 (339)
T 3o4o_C 38 LRCPQVPYWLWASVSPRINLTWHKNDSARTVP-G----EEETRMWAQ------DGALWLLPALQEDSGTYVCTTRNASYC 106 (339)
T ss_dssp EECTTSCSSCCSTTSSCCBCCCEESSCCSCCS-C----CSSSCEEEE------TTEEEESSBCTTCCEEEECCEEETTEE
T ss_pred EEeccccccccccCCCCceEEEEECCCCcccC-c----cccccEEee------CCeEEECCCCcccCEEEEEEEECCcce
Confidence 578887 777 999999832221111 0 013455433 3369999999999999999994 4445
Q ss_pred eeEEEEEEEEcCCC--------ceEeeCCCeEEEecC-----C--CCceeEEEEeCCCeEEEecC---CCCceEEEEecc
Q psy3125 72 MNMAIMLNVDDRGR--------GARLSAGPLLNFAFP-----D--LLTTNIYTYTGDARFSVIHP---QNSDEWNMKIDY 133 (163)
Q Consensus 72 ~~~~~~l~V~~~~~--------~~~v~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~L~i~~ 133 (163)
....+.|.|...+. ...+..|..+.+.|. . .+...+.|++++..+..... .......|.|.+
T Consensus 107 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~ 186 (339)
T 3o4o_C 107 DKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHD 186 (339)
T ss_dssp EEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESS
T ss_pred EEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcc
Confidence 66777888887642 235678899999997 3 23567889887653321100 001124699999
Q ss_pred cCcCCCeeEEEEc-CCCC----CccEEEEEEEec
Q psy3125 134 AQKRDAGIYECQV-NTEP----KMNMAIMLNVDG 162 (163)
Q Consensus 134 v~~~D~G~Y~C~a-~~~~----~~~~~~~L~V~~ 162 (163)
++.+|+|.|+|.| |..+ ..+..+.|.|..
T Consensus 187 v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 187 VALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK 220 (339)
T ss_dssp CCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEEC
T ss_pred cCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEc
Confidence 9999999999999 7665 456788888863
No 146
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.70 E-value=7.8e-16 Score=103.40 Aligned_cols=154 Identities=11% Similarity=0.102 Sum_probs=93.6
Q ss_pred CceEEec----CC-CcEEEEEecCCeeEEecceEe-c---CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-C
Q psy3125 1 MACTVMG----LG-RPVSWMRKRDLHILTTNIYTY-T---GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-P 70 (163)
Q Consensus 1 l~C~~~~----~~-~~v~W~k~~~~~~~~~~~~~~-~---~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~ 70 (163)
|.|.+.+ .+ +.+.|.|. +..+........ . ..+|..+.. .++.+|.|.+++.+|+|.|+|++.+. +
T Consensus 14 L~C~~~~~~~~~~~~~~~W~~~-~~~i~~~~~~~~~~~~~~~~r~~~~~---~~~~~L~I~~v~~~D~G~Y~C~~~~~~g 89 (201)
T 1dr9_A 14 LSCGHNVSVEELAQTRIYWQKE-KKMVLTMMSGDMNIWPEYKNRTIFDI---TNNLSIVILALRPSDEGTYECVVLKYEK 89 (201)
T ss_dssp ECCSCCCCTTHHHHCEEEEEET-TEEEEEEETTEEEECHHHHTTEEEES---TTTTEEEECSCCGGGCEEEEEEEEECCT
T ss_pred EecccCCCcccccccEEEEEeC-CcEEEEEeCCceeecCcccceeEEcc---CCCcEEEEecccchhCeEEEEEEEcCCC
Confidence 5788863 35 88999983 222221111110 0 123444422 24678999999999999999999542 2
Q ss_pred C-e----eEEEEEEEEcCCCceE--e---eCCCeEEEecCC---CCceeEEEEeCCCeEEE-----ecCCCCce-EEEEe
Q psy3125 71 K-M----NMAIMLNVDDRGRGAR--L---SAGPLLNFAFPD---LLTTNIYTYTGDARFSV-----IHPQNSDE-WNMKI 131 (163)
Q Consensus 71 ~-~----~~~~~l~V~~~~~~~~--v---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~L~i 131 (163)
. . ...+.|.|..++..+. + ..|..+.+.|.. .+.+.+.|++++..+.. ........ ....+
T Consensus 90 ~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~ 169 (201)
T 1dr9_A 90 DAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSK 169 (201)
T ss_dssp TSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEE
T ss_pred CccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEE
Confidence 2 2 3567788877632222 1 346678888964 35678999988664321 11111122 22234
Q ss_pred cccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 132 DYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 132 ~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
..++.+|+|.|+|.| |..+..+..+.+
T Consensus 170 ~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 170 LDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEEEecCCCEEEEEEecCcceeeeEEec
Confidence 456678999999999 888877776654
No 147
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.70 E-value=3.5e-17 Score=111.98 Aligned_cols=155 Identities=13% Similarity=0.134 Sum_probs=95.5
Q ss_pred CceEEecCC--CcEEEEEecCC-e--eEEecceEec--CCCeEE----------EeccCCCCeEEEEEcccCcCCCeeEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDL-H--ILTTNIYTYT--GDARFS----------VIHPQNSDEWNMKIDYAQKRDAGIYE 63 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~-~--~~~~~~~~~~--~~~r~~----------~~~~~~~~~~~L~i~~v~~~D~G~Y~ 63 (163)
|.|.+.+.+ +.|.|+|.+.. . .+..+ .... ...|+. +.. +.+|.|.+++.+|+|.|+
T Consensus 20 L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~ 93 (231)
T 2pet_A 20 LDCTPTGTHDHYMLEWFLTDRSGARPRLASA-EMQGSELQVTMHDTRGRSPPYQLDS-----QGRLVLAEAQVGDERDYV 93 (231)
T ss_dssp ECCCCBSCCSEEEEEEEEECTTCCCCEEEEE-EEETTEEEEEECCCSCCSSCCEECT-----TCCEEESSCCGGGCEEEE
T ss_pred EecccCCCCCceEEEEEEeCCCceeEEEEec-cccCCccccccccccccccccccCC-----CceEEEcccCcccCceEE
Confidence 679999888 79999985432 1 12111 0000 012222 332 233999999999999999
Q ss_pred EEeeCC--CCeeEEEEEEEEcCCCceE---------eeCCCeE-EEecCC---CCceeEEEEeCCCeEEEec--------
Q psy3125 64 CQVNTE--PKMNMAIMLNVDDRGRGAR---------LSAGPLL-NFAFPD---LLTTNIYTYTGDARFSVIH-------- 120 (163)
Q Consensus 64 C~~~~~--~~~~~~~~l~V~~~~~~~~---------v~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~-------- 120 (163)
|.+.+. +.....+.|.|..++..+. +..|..+ .+.|.. .+.+.+.|++++..+....
T Consensus 94 C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~ 173 (231)
T 2pet_A 94 CVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYM 173 (231)
T ss_dssp EEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEE
T ss_pred EEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceee
Confidence 999543 4566778888887653332 2245555 888864 4566788988764322111
Q ss_pred ------CCCC---ceEEEEecccCcCCCeeEEEEc-C-----CCCC-ccEEEEEEEe
Q psy3125 121 ------PQNS---DEWNMKIDYAQKRDAGIYECQV-N-----TEPK-MNMAIMLNVD 161 (163)
Q Consensus 121 ------~~~~---~~~~L~i~~v~~~D~G~Y~C~a-~-----~~~~-~~~~~~L~V~ 161 (163)
...+ ....|.|.....+|+|.|+|.| | ..+. .+..+.|.|.
T Consensus 174 ~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V~ 230 (231)
T 2pet_A 174 TSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTLH 230 (231)
T ss_dssp EEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCCC
T ss_pred cceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEEe
Confidence 0000 0256888866677799999999 7 3344 5556666553
No 148
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.70 E-value=3.9e-16 Score=118.84 Aligned_cols=156 Identities=13% Similarity=0.120 Sum_probs=98.6
Q ss_pred CceEEecCC-CcEEEEEecCCe-e--E-Eecc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC----
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH-I--L-TTNI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---- 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~-~--~-~~~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---- 70 (163)
|.|.+.+.+ +.|.|+|.+.+. + + .... ......+||.+.. .....+|.|.+++.+|+|.|+|.+.+..
T Consensus 20 L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~ 97 (523)
T 2rcj_C 20 ISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSK--SGTSASLAISGLEAEDESDYYCASWNSSDNSY 97 (523)
T ss_pred EEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEec--CCCEEEEEECCCChhhCEEEEEEEccCCCccc
Confidence 689999988 999999854221 1 1 1110 0111246887543 3457899999999999999999995432
Q ss_pred CeeEEEEEEEEcC----C------CceEeeCCCeEEEecCCC--Cc--eeEEEEeCCCeEEEec------CCCCc----e
Q psy3125 71 KMNMAIMLNVDDR----G------RGARLSAGPLLNFAFPDL--LT--TNIYTYTGDARFSVIH------PQNSD----E 126 (163)
Q Consensus 71 ~~~~~~~l~V~~~----~------~~~~v~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~------~~~~~----~ 126 (163)
.....+.|.|... + ....+..|..+.+.|... +. ..+.|++++..+.... ..... .
T Consensus 98 ~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~ 177 (523)
T 2rcj_C 98 VFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAAS 177 (523)
T ss_pred cccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEE
Confidence 2234556777421 1 111233466788899643 22 3788998876432110 00111 2
Q ss_pred EEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 127 WNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 127 ~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
..|.|.+++.+|+|.|+|.| |..+.....+.+
T Consensus 178 s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 210 (523)
T 2rcj_C 178 SYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP 210 (523)
T ss_pred EEEEEechhcCCCceEEEEEEecCcccccceee
Confidence 46999999999999999999 776665555443
No 149
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.70 E-value=1.5e-16 Score=114.07 Aligned_cols=151 Identities=11% Similarity=0.073 Sum_probs=88.7
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CC-----eeE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PK-----MNM 74 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~-----~~~ 74 (163)
|.|.+.+.++.+.|+|.+....... ....... ......|.|.+++.+|+|.|+|.+.+. +. .+.
T Consensus 138 L~C~~~~~~~~~~w~k~g~~~~~~~--------~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~ 207 (316)
T 3vh8_G 138 LQCWSDIMFEHFFLHKEGISKDPSR--------LVGQIHD--GVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSD 207 (316)
T ss_dssp EEEEESSCCSEEEEEETTCCSCCEE--------EECEEET--TEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCC
T ss_pred EEEcCCCCCcEEEEEECCCccccce--------eeeeecC--CCceEEEEECCCChhhCceEEEEEecCCCCccccCCCC
Confidence 5799965558899998332211100 0001111 123567999999999999999999542 21 255
Q ss_pred EEEEEEEcCCC--------ceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEe-----cCCCCceEEEEecccCcCCCe
Q psy3125 75 AIMLNVDDRGR--------GARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVI-----HPQNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 75 ~~~l~V~~~~~--------~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~i~~v~~~D~G 140 (163)
.+.|.|..... ...+..|..+.+.|... +.....|++++...... .........|.|.+++ |+|
T Consensus 208 ~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G 285 (316)
T 3vh8_G 208 PLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGG 285 (316)
T ss_dssp CEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESSCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------C
T ss_pred CEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCCCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCE
Confidence 56677764321 11345688899999643 34578888887644321 1122234679999999 999
Q ss_pred eEEEEc-CCCC-----CccEEEEEEEecC
Q psy3125 141 IYECQV-NTEP-----KMNMAIMLNVDGK 163 (163)
Q Consensus 141 ~Y~C~a-~~~~-----~~~~~~~L~V~~~ 163 (163)
.|+|.| +..+ ..+..+.|.|.|+
T Consensus 286 ~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 314 (316)
T 3vh8_G 286 TYRCFGSFRHSPYEWSDPSDPLLVSVTGN 314 (316)
T ss_dssp EEEEEEEBTTBTTEECCCCCCEEC-----
T ss_pred EEEEEeecCCCchhccCCCCcEEEEEeCC
Confidence 999999 6543 4678889998874
No 150
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.70 E-value=2.4e-15 Score=105.39 Aligned_cols=151 Identities=13% Similarity=0.111 Sum_probs=97.4
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC--C----CCeeE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT--E----PKMNM 74 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~--~----~~~~~ 74 (163)
|.|.+.+..+.+.|+|.+.. +.. ... ..++ . ....+.+|.|.+++.+|+|.|+|.+.+ . ...+.
T Consensus 26 L~C~~~~~~~~~~W~k~g~~-~~~-~~~----~~~~---~-~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~ 95 (257)
T 1b6u_A 26 LQCWSDVRFQHFLLHREGKF-KDT-LHL----IGEH---H-DGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSD 95 (257)
T ss_dssp EEEEESSCCSEEEEEEESTT-CEE-EEE----ECBC---C-TTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCC
T ss_pred EEEecCCCCcEEEEEECCCC-CCc-cee----eeec---c-CCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCC
Confidence 57998754488999984322 111 000 0000 0 112467899999999999999999942 1 12355
Q ss_pred EEEEEEEcCCC--------ceEeeCCCeEEEecCCCC-ceeEEEEeCCCeEEEecC-----CCCceEEEEecccCcCCCe
Q psy3125 75 AIMLNVDDRGR--------GARLSAGPLLNFAFPDLL-TTNIYTYTGDARFSVIHP-----QNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 75 ~~~l~V~~~~~--------~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~L~i~~v~~~D~G 140 (163)
.+.|.|..... ...+..|..+.+.|.... .....|++++..+..... .......|.|.+++ |+|
T Consensus 96 ~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G 173 (257)
T 1b6u_A 96 PLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGG 173 (257)
T ss_dssp CEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECSSCCSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCE
T ss_pred CEEEecccCCCCcceEccCCCccCCCCEEEEEEeCCCCCcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCE
Confidence 67788875421 123567889999997532 346788888775543211 11236779999998 999
Q ss_pred eEEEEc-CCC-----CCccEEEEEEEecC
Q psy3125 141 IYECQV-NTE-----PKMNMAIMLNVDGK 163 (163)
Q Consensus 141 ~Y~C~a-~~~-----~~~~~~~~L~V~~~ 163 (163)
.|+|.| +.. ...+..+.|.|.|+
T Consensus 174 ~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~ 202 (257)
T 1b6u_A 174 TYRCFGSFRDSPYEWSNSSDPLLVSVTGN 202 (257)
T ss_dssp EEEEEEECSSCTTBBCCCCCCEEECCBCC
T ss_pred EEEEEEEcCCCCcccccCCCCEEEEEecc
Confidence 999999 542 24567788888763
No 151
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.69 E-value=2.6e-16 Score=119.88 Aligned_cols=149 Identities=15% Similarity=0.170 Sum_probs=104.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCe-eEEEEeeCC-CC-eeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAG-IYECQVNTE-PK-MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~~~~~-~~-~~~~~ 76 (163)
|.|.+.+.+ +.|.|+|.++..+ ..+.++.+.. +.+|.|.+++.+|+| .|+|.+.+. +. .+..+
T Consensus 134 l~C~~~~~~~~~v~W~~~~g~~l--------~~~~~~~~~~-----~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~ 200 (524)
T 2ec8_A 134 VRCPLTDPEVTNYSLKGCQGKPL--------PKDLRFIPDP-----KAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKF 200 (524)
T ss_dssp ECCCBSCCCCSCEEEECSSSCCC--------CSSCEEEEET-----TTEEEEESCCGGGTTCEEEEEEC----CCCCCCE
T ss_pred EECcCCCCccceEEEEccCCcCc--------CCCCceeECC-----CccEEEeccchhhCCceEEEEEEECCceEEEEEE
Confidence 579999988 9999997444332 2345666553 236999999999999 999999542 22 24466
Q ss_pred EEEEEc----C------CCceEeeCCCeEEEecCC--CCce-eEEEEeCCCeE--EEe------cC-CCCceEEEEeccc
Q psy3125 77 MLNVDD----R------GRGARLSAGPLLNFAFPD--LLTT-NIYTYTGDARF--SVI------HP-QNSDEWNMKIDYA 134 (163)
Q Consensus 77 ~l~V~~----~------~~~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~--~~~------~~-~~~~~~~L~i~~v 134 (163)
.|.|.. + +....+..|..+.+.|.. .+.+ .+.|++++... ... .. .......|.|.++
T Consensus 201 ~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~ 280 (524)
T 2ec8_A 201 ILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSA 280 (524)
T ss_dssp ECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSC
T ss_pred EEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCC
Confidence 777762 1 223356778889999963 2333 48999887761 111 10 1233567999999
Q ss_pred CcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 135 QKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 135 ~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
+.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 281 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 309 (524)
T 2ec8_A 281 RVNDSGVFMCYANNTFGSANVTTTLEVVD 309 (524)
T ss_dssp CTTTCEEEEEEEECSSCEEEEEEEEEEES
T ss_pred CHHHCEEEEEEEEecCCceEEEEEEEEec
Confidence 999999999999 8888888899998864
No 152
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.69 E-value=2.5e-16 Score=107.93 Aligned_cols=149 Identities=13% Similarity=0.201 Sum_probs=94.5
Q ss_pred CceEEecCC---CcEEEEEecCCe-e--E-Eec----ceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH-I--L-TTN----IYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~-~--~-~~~----~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+. + + ... ...+ ...+|+.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 99 (225)
T 1op3_H 20 LSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARK 99 (225)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 689999865 889999865321 1 1 111 1111 1247998886544568899999999999999999996
Q ss_pred CCC------C---eeEEEEEEEEcCC---CceE-------eeCCCeEEEecCCC---Cce-eEEEEeCCCeE---EEec-
Q psy3125 68 TEP------K---MNMAIMLNVDDRG---RGAR-------LSAGPLLNFAFPDL---LTT-NIYTYTGDARF---SVIH- 120 (163)
Q Consensus 68 ~~~------~---~~~~~~l~V~~~~---~~~~-------v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~---~~~~- 120 (163)
+.. . ....+.|.|...+ +.+. +..|..+.+.|... +.+ .+.|++++... ....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~ 179 (225)
T 1op3_H 100 GSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAV 179 (225)
T ss_dssp CCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCE
T ss_pred cCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCce
Confidence 542 1 2235678887621 1111 23567888999642 333 77888776531 1000
Q ss_pred -CCCC---ceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 121 -PQNS---DEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 121 -~~~~---~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
...+ ....|.|.++..+| |.|+|.| |..+
T Consensus 180 ~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 180 LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp ECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred eCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 1111 23469999999889 9999999 6443
No 153
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.69 E-value=3.2e-16 Score=105.61 Aligned_cols=148 Identities=12% Similarity=0.059 Sum_probs=92.8
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC------CCeeE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE------PKMNM 74 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~------~~~~~ 74 (163)
|.|.+.+..+.+.|+|.+. .+.. ... ..++ .. ......|.|.+++.+|+|.|+|.+.+. ...+.
T Consensus 27 L~C~~~~~~~~~~w~k~g~-~~~~-~~~----~~~~--~~--~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~ 96 (201)
T 1nkr_A 27 LQCWSDVMFEHFLLHREGM-FNDT-LRL----IGEH--HD--GVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSD 96 (201)
T ss_dssp EEEEESSCCSEEEEEEESS-SCEE-EEE----ECEE--ET--TEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCC
T ss_pred EEEeccCCCCEEEEEECCC-cCCc-cee----eeec--CC--CCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCC
Confidence 5799975339999998432 1111 000 0111 11 123577999999999999999999431 12345
Q ss_pred EEEEEEEcCC--------CceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEec-----CCCCceEEEEecccCcCCCe
Q psy3125 75 AIMLNVDDRG--------RGARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIH-----PQNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 75 ~~~l~V~~~~--------~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~i~~v~~~D~G 140 (163)
.+.|.|.... +...+..|..+.+.|... ......|++++..+.... ........|.|.+++ |+|
T Consensus 97 ~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G 174 (201)
T 1nkr_A 97 PLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGG 174 (201)
T ss_dssp CEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSCCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCE
T ss_pred CEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCCCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCe
Confidence 6677776531 112466788999999743 335677888875432111 011225679999998 999
Q ss_pred eEEEEc-CCC-----CCccEEEEEEE
Q psy3125 141 IYECQV-NTE-----PKMNMAIMLNV 160 (163)
Q Consensus 141 ~Y~C~a-~~~-----~~~~~~~~L~V 160 (163)
.|+|.| +.. ...+..+.|.|
T Consensus 175 ~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 175 TYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred eEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 999999 432 23466777776
No 154
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.69 E-value=4.4e-16 Score=111.01 Aligned_cols=160 Identities=11% Similarity=0.055 Sum_probs=99.1
Q ss_pred CceEEecCC--CcEEEEEecCCeeEE---ec---ceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILT---TN---IYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE- 69 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~---~~---~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~- 69 (163)
|.|.+.+.+ +.|.|+|.+...... .. ..... ..+|+.+... ..++++|.|.+++.+|+|.|+|++.+.
T Consensus 19 L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~a~n~~ 97 (308)
T 4fom_A 19 LKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNY-SLNDATITLHNIGFSDSGKYICKAVTFP 97 (308)
T ss_dssp ECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCC-SSSBCCEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeecc-CCCceEEEEccCCHHHCEEEEEEEeeCC
Confidence 689987554 679999854322111 00 01111 1346555432 235678999999999999999999543
Q ss_pred -CCeeEEEEEEEEcCCCc--------eEeeCCCeEEEecC---CCCceeEEEEeCCCeEEEec--CCC---CceEEEEec
Q psy3125 70 -PKMNMAIMLNVDDRGRG--------ARLSAGPLLNFAFP---DLLTTNIYTYTGDARFSVIH--PQN---SDEWNMKID 132 (163)
Q Consensus 70 -~~~~~~~~l~V~~~~~~--------~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~L~i~ 132 (163)
+..+..+.+.+...+.. .....+..+.+.|. ..+.+.+.|++++..+.... ... .....|.|.
T Consensus 98 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~ 177 (308)
T 4fom_A 98 LGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLF 177 (308)
T ss_dssp TEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEEC
T ss_pred CcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEE
Confidence 33445556666554322 22334566778874 24557889998876543221 111 123469999
Q ss_pred ccCcCCCeeEEEEc-CCCCCcc--EEEEEEEe
Q psy3125 133 YAQKRDAGIYECQV-NTEPKMN--MAIMLNVD 161 (163)
Q Consensus 133 ~v~~~D~G~Y~C~a-~~~~~~~--~~~~L~V~ 161 (163)
+++.+|+|.|+|.| |..+... ..+.|.|.
T Consensus 178 ~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~ 209 (308)
T 4fom_A 178 PTRFARGRRITCVVKHPALEKDIRYSFILDIQ 209 (308)
T ss_dssp CCGGGTTCEEEEEEECTTCSSCEEEEEECCCC
T ss_pred eeeecCCccEEEEEEccCCCCceEEeEEEEEe
Confidence 99999999999999 7665544 44555443
No 155
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=3.1e-17 Score=111.15 Aligned_cols=152 Identities=14% Similarity=0.095 Sum_probs=95.8
Q ss_pred CceEEecCC-CcEEEEEecCCe-e--EEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC--CCC-
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH-I--LTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT--EPK- 71 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~-~--~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~--~~~- 71 (163)
|.|.+.+.+ +.|.|+|.+.+. + +....... ...+|+.+.. ..+..+|.|.+++.+|+|.|+|.+.+ ...
T Consensus 19 L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~ 96 (212)
T 1nfd_E 19 ITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST--SGTTATLTISGAQPEDEAAYYCLSSYGDNNDL 96 (212)
T ss_dssp EEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE--ETTEEEEEETTCCGGGCSEEEEEEEETTTTEE
T ss_pred EEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe--eCCEEEEEECcCCcccCEEEEEEEEcccCccc
Confidence 689998888 889999864322 1 11111111 1246887765 34578999999999999999999963 221
Q ss_pred -eeEEEEEEEEcC---CCceEe-------eCCCeEEEecCCC---Cc-eeEEEEeCCCeEEEecC-----CCC----ceE
Q psy3125 72 -MNMAIMLNVDDR---GRGARL-------SAGPLLNFAFPDL---LT-TNIYTYTGDARFSVIHP-----QNS----DEW 127 (163)
Q Consensus 72 -~~~~~~l~V~~~---~~~~~v-------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~-----~~~----~~~ 127 (163)
......|.|... ++.+.+ ..|..+.+.|... +. +.+.|++++..+..... ... ...
T Consensus 97 ~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s 176 (212)
T 1nfd_E 97 VFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSS 176 (212)
T ss_dssp EECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEE
T ss_pred ccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEE
Confidence 123455666532 112221 2366788888632 22 67899988764431110 001 124
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCccE
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMNM 154 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~~ 154 (163)
.|.|.+++.+|+|.|+|.| |..+....
T Consensus 177 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 177 YLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp BCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred EEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 4999999999999999999 77655443
No 156
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.69 E-value=7.6e-16 Score=104.64 Aligned_cols=154 Identities=13% Similarity=0.085 Sum_probs=94.7
Q ss_pred CceEE-ecCC--CcEEEEEecCCe---eEEecceE--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-
Q psy3125 1 MACTV-MGLG--RPVSWMRKRDLH---ILTTNIYT--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK- 71 (163)
Q Consensus 1 l~C~~-~~~~--~~v~W~k~~~~~---~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~- 71 (163)
|.|.+ .+.+ +.|.|+|.+.+. .+...... ....+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+...
T Consensus 20 L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 97 (216)
T 2xzc_L 20 ISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK--SGTSATLGITGLQTGDEADYYCGTWDSSLN 97 (216)
T ss_dssp EEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEEECTTSC
T ss_pred EEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec--cCCEEEEEECCCCcccCEEEEEEEEeCCCc
Confidence 67995 4553 799999864321 11111111 11245887765 34578999999999999999999965432
Q ss_pred --eeEEEEEEEEcC--CCceEee-------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEE------ecCCC-C----c
Q psy3125 72 --MNMAIMLNVDDR--GRGARLS-------AGPLLNFAFPDL---LT-TNIYTYTGDARFSV------IHPQN-S----D 125 (163)
Q Consensus 72 --~~~~~~l~V~~~--~~~~~v~-------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~------~~~~~-~----~ 125 (163)
....+.|.|... ++.+.+. .|..+.+.|... +. ..+.|++++..+.. ..... . .
T Consensus 98 ~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~ 177 (216)
T 2xzc_L 98 PVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSL 177 (216)
T ss_dssp EEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEE
T ss_pred ceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEE
Confidence 233456777533 2222221 256788999642 22 37899987653311 11111 1 1
Q ss_pred eEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 126 EWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 126 ~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
...|.|.++..+|+|.|+|.| |.........
T Consensus 178 ~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 209 (216)
T 2xzc_L 178 SSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 209 (216)
T ss_dssp EEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred EEEEEECHHHhCCCCcEEEEEEcCCCCCceEE
Confidence 236999999999999999999 6655444333
No 157
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.69 E-value=2e-16 Score=110.37 Aligned_cols=159 Identities=12% Similarity=0.233 Sum_probs=97.2
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Ee---cceEe---cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TT---NIYTY---TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~---~~~~~---~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..|.|+|.+... .+ .. +.... ...+||.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 99 (253)
T 3liz_H 20 LSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRD 99 (253)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 689998743 899999964322 11 10 00001 1247888876444578999999999999999999995
Q ss_pred CC-----CCeeEEEEEEEE-cCC--Cce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeE--E----EecC-
Q psy3125 68 TE-----PKMNMAIMLNVD-DRG--RGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARF--S----VIHP- 121 (163)
Q Consensus 68 ~~-----~~~~~~~~l~V~-~~~--~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~--~----~~~~- 121 (163)
+. ......+.|.|. ... +.+ .+..|..+.+.|... +.. .+.|+.++... . ....
T Consensus 100 ~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g 179 (253)
T 3liz_H 100 PAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSD 179 (253)
T ss_dssp CBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETT
T ss_pred cCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCC
Confidence 43 123344567776 221 111 123467788888532 223 67888776511 0 0111
Q ss_pred CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 122 QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 122 ~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
.....+.|.|.++..+| |.|+|.| +..+.....+.|.+
T Consensus 180 ~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 180 LYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp EEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred eEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 01123569999999999 9999999 76666655555544
No 158
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.68 E-value=2.6e-16 Score=107.28 Aligned_cols=160 Identities=13% Similarity=0.120 Sum_probs=99.9
Q ss_pred CceEEec-CC-Cc----EEEEEecCCe-e--EE-ecceEecCCCeEEEeccC---CCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMG-LG-RP----VSWMRKRDLH-I--LT-TNIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~-~~-~~----v~W~k~~~~~-~--~~-~~~~~~~~~~r~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+ .+ +. |.|+|.+... + .. .....+...+|+.+..+. ..++.+|.|.+++.+|+|.|+|++.
T Consensus 19 L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 98 (221)
T 3eow_R 19 LPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFV 98 (221)
T ss_dssp EECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCCSCBEEEEE
T ss_pred EEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHCeEEEEEEE
Confidence 5788865 34 44 9999853211 1 11 112223336777777521 2257899999999999999999995
Q ss_pred CC--CCeeEEEEEEEEcCCCceEe-----eCCCeE-EEecC---CCCceeEEEEeCCCeE----EEecC---CCCceEEE
Q psy3125 68 TE--PKMNMAIMLNVDDRGRGARL-----SAGPLL-NFAFP---DLLTTNIYTYTGDARF----SVIHP---QNSDEWNM 129 (163)
Q Consensus 68 ~~--~~~~~~~~l~V~~~~~~~~v-----~~~~~~-~~~~~---~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~L 129 (163)
+. +.....+.|.|..++..... ..|..+ .+.|. ..+.+.+.|+++.... ..... .......|
T Consensus 99 ~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L 178 (221)
T 3eow_R 99 TFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLW 178 (221)
T ss_dssp ESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEE
T ss_pred eCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEE
Confidence 42 44556666777665422111 234445 58886 3455688898653321 11111 11235679
Q ss_pred EecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 130 KIDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 130 ~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
.|.++..+|+|.|+|.| |..+.....+.|++
T Consensus 179 ~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 179 ILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp ECCCCSCCCCCCEEEEECCSCSSSCEEEEECC
T ss_pred EEeCCHHHCCCeEEEEEECCCCCCCeEEEEEE
Confidence 99999999999999999 77776666666554
No 159
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.68 E-value=1.8e-15 Score=108.19 Aligned_cols=160 Identities=13% Similarity=0.149 Sum_probs=100.2
Q ss_pred CceEEecCC-C-----cEEEEEecCCe---eEEe-cceEecCCCeEEEeccC---CCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG-R-----PVSWMRKRDLH---ILTT-NIYTYTGDARFSVIHPQ---NSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~-~-----~v~W~k~~~~~---~~~~-~~~~~~~~~r~~~~~~~---~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ + .|.|+|.+... ++.. ....+....|+.+.... ..++++|.|.+++.+|+|.|+|++.
T Consensus 20 L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~ 99 (313)
T 4fqp_A 20 LPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFV 99 (313)
T ss_dssp ECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGCEEEEEEEE
T ss_pred EEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhCEEEEEEEe
Confidence 689999877 3 48999853221 1111 12234445677664321 2346789999999999999999985
Q ss_pred CC--CCeeEEEEEEEEcCCC------ceEeeCCCeEEEecC---CCCceeEEEEeCCCeEEEec----CCCC---ceEEE
Q psy3125 68 TE--PKMNMAIMLNVDDRGR------GARLSAGPLLNFAFP---DLLTTNIYTYTGDARFSVIH----PQNS---DEWNM 129 (163)
Q Consensus 68 ~~--~~~~~~~~l~V~~~~~------~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~L 129 (163)
+. +..+..+.|.|...+. ...+..+....+.|. ..+.+.+.|++++..+.... .... ....|
T Consensus 100 ~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l 179 (313)
T 4fqp_A 100 TFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLW 179 (313)
T ss_dssp CSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEE
T ss_pred eccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceee
Confidence 43 3445555666555532 223445566666774 23557889998877553221 1111 13469
Q ss_pred EecccCcCCCeeEEEEc-CCCCCccE--EEEEEE
Q psy3125 130 KIDYAQKRDAGIYECQV-NTEPKMNM--AIMLNV 160 (163)
Q Consensus 130 ~i~~v~~~D~G~Y~C~a-~~~~~~~~--~~~L~V 160 (163)
.|.+++.+|+|.|+|.| |..+.... .+.|.|
T Consensus 180 ~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V 213 (313)
T 4fqp_A 180 ILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTV 213 (313)
T ss_dssp EECCCGGGTTCEEEEEEECTTSSSCEEEEEECCB
T ss_pred eecccccccCeeEEEEEEccCcCccceeeeeccc
Confidence 99999999999999999 76655444 444444
No 160
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.68 E-value=1.2e-15 Score=106.07 Aligned_cols=149 Identities=11% Similarity=0.138 Sum_probs=94.0
Q ss_pred CceEEecCC------CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG------RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.+.+ ..+........ ..+||.+.. ..++++|.|.+++.+|+|.|.|++.+.
T Consensus 54 L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 131 (252)
T 3bkj_L 54 ISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG--SGTDFTLRISRVEAEDLGVYYCFQASL 131 (252)
T ss_dssp EEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSB
T ss_pred EEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc--cCCEEEEEECCCCcccCEEEEEEEEcC
Confidence 689998876 78999986422 11221111111 246887765 345789999999999999999999543
Q ss_pred CC--eeEEEEEEEEcC--CCceEee-------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe------cCC-CC---
Q psy3125 70 PK--MNMAIMLNVDDR--GRGARLS-------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI------HPQ-NS--- 124 (163)
Q Consensus 70 ~~--~~~~~~l~V~~~--~~~~~v~-------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~------~~~-~~--- 124 (163)
.. ....+.|.|... ++.+.+. .|..+.+.|... +. ..+.|++++..+... ... ..
T Consensus 132 ~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~ 211 (252)
T 3bkj_L 132 VPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY 211 (252)
T ss_dssp SSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCE
T ss_pred CccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCE
Confidence 22 223356777542 2222221 356788899642 22 368999887643211 001 11
Q ss_pred -ceEEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 125 -DEWNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 125 -~~~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
....|.|.+++.+|+|.|+|.| |....
T Consensus 212 ~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 212 SMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp EEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred EEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 1246999999999999999999 65444
No 161
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.68 E-value=1.4e-16 Score=109.36 Aligned_cols=155 Identities=14% Similarity=0.129 Sum_probs=96.5
Q ss_pred CceEEecCC--C-cEEEEEecCC-e--eEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-
Q psy3125 1 MACTVMGLG--R-PVSWMRKRDL-H--ILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK- 71 (163)
Q Consensus 1 l~C~~~~~~--~-~v~W~k~~~~-~--~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~- 71 (163)
|.|.+.+.+ + .|.|+|.+.+ . .+....... ...+||.+.. ..++.+|.|.+++.+|+|.|+|++.+...
T Consensus 39 L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 116 (234)
T 2j6e_L 39 ISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK--SGTSASLAISGLRSEDEADYYCATWDDSLS 116 (234)
T ss_dssp EEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE--ETTEEEEEEESCCSTTCSEEEEEEEETTTT
T ss_pred EEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe--cCCeEEEEECCCCHHHCEEEEEEEEcCCcc
Confidence 689999865 3 7999986422 1 122111111 1246887765 34578999999999999999999954332
Q ss_pred ---eeEEEEEEEEcC---CCceEe-------eCCCeEEEecCCC---Cc-eeEEEEeCCCeEEE----ec---CCC---C
Q psy3125 72 ---MNMAIMLNVDDR---GRGARL-------SAGPLLNFAFPDL---LT-TNIYTYTGDARFSV----IH---PQN---S 124 (163)
Q Consensus 72 ---~~~~~~l~V~~~---~~~~~v-------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~----~~---~~~---~ 124 (163)
....+.|.|... ++.+.+ ..|..+.+.|... +. ..+.|++++..+.. .. ... .
T Consensus 117 ~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~ 196 (234)
T 2j6e_L 117 AVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYA 196 (234)
T ss_dssp EEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCB
T ss_pred eeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEE
Confidence 222345666321 112222 1356788899753 22 37899987654311 00 011 1
Q ss_pred ceEEEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 125 DEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 125 ~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
....|.|.++..+|+|.|+|.| |.......++.
T Consensus 197 ~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 230 (234)
T 2j6e_L 197 ASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 230 (234)
T ss_dssp CCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEEC
T ss_pred EEEEEEECHHHcCCCCeEEEEEEeCCCceEEecc
Confidence 2357999999999999999999 77666655553
No 162
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.68 E-value=3.6e-16 Score=112.00 Aligned_cols=147 Identities=12% Similarity=0.110 Sum_probs=95.5
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC------CCeeE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE------PKMNM 74 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~------~~~~~ 74 (163)
|.|.+.+.++.+.|+|.+.. +. .+. .. .....+|.|.+++.+|+|.|+|++.+. ...+.
T Consensus 43 L~C~~~~~~~~~~W~k~g~~--~~---------~~~--~~--~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~ 107 (316)
T 3vh8_G 43 LRCHYRHRFNNFMLYKEDRI--HI---------PIF--HG--RIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSN 107 (316)
T ss_dssp EEEEBTTBCCSEEEEESSCS--SS---------CHH--HH--CCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCC
T ss_pred EEEEccCCCceEEEEeCCCc--cc---------eee--cC--CcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCC
Confidence 57999888889999983221 11 000 00 112456999999999999999998421 12345
Q ss_pred EEEEEEEcCC--------CceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEe-----cCCCCceEEEEecccCcCCCe
Q psy3125 75 AIMLNVDDRG--------RGARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVI-----HPQNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 75 ~~~l~V~~~~--------~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~i~~v~~~D~G 140 (163)
.+.|.|.... +...+..|..+.+.|... ......|++++...... .........|.|.+++.+|+|
T Consensus 108 ~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 187 (316)
T 3vh8_G 108 PVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAG 187 (316)
T ss_dssp CEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCE
T ss_pred cEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCc
Confidence 5667776432 112366788899999743 34567788776533111 111234567999999999999
Q ss_pred eEEEEc-CCCCC-----ccEEEEEEEec
Q psy3125 141 IYECQV-NTEPK-----MNMAIMLNVDG 162 (163)
Q Consensus 141 ~Y~C~a-~~~~~-----~~~~~~L~V~~ 162 (163)
.|+|.| |..+. .+..+.|.|.+
T Consensus 188 ~Y~C~a~n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 188 TYRCYGSVTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp EEEEEEECTTCTTBCCCCCCCEEEEEEC
T ss_pred eEEEEEecCCCCccccCCCCCEEEEecC
Confidence 999999 76553 25666777653
No 163
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.68 E-value=6.1e-16 Score=113.81 Aligned_cols=151 Identities=17% Similarity=0.270 Sum_probs=101.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-C-CeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-P-KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~-~~~~~~~ 77 (163)
|.|.+.+.| +.|.|+|.+ ..+.. .....++.... +.+|.|.+++.+|+|.|+|.+.+. + .....+.
T Consensus 141 l~C~~~~~p~~~v~W~~~~-~~~~~-----~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~ 209 (403)
T 3laf_A 141 LKCEVIGDPMPTIHWQKNQ-QDLNP-----IPGDSRVVVLP-----SGALQISRLQPGDSGVYRCSARNPASTRTGNEAE 209 (403)
T ss_dssp ECCCEECSSCCEEEEEESS-SBCCC-----CTTCCSEEECT-----TSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEE
T ss_pred EEEEEcccCCCeEEEEECC-Eeccc-----cCCceEEEEcC-----CceEEEcccccccCEEEEEEEEcCCCceecccee
Confidence 579999999 999999832 21110 11234444432 336999999999999999999542 2 2334456
Q ss_pred EEEEcCC------------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC--CCceEEEEecccCcCCCee
Q psy3125 78 LNVDDRG------------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ--NSDEWNMKIDYAQKRDAGI 141 (163)
Q Consensus 78 l~V~~~~------------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~ 141 (163)
|.|...+ ....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.
T Consensus 210 l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 289 (403)
T 3laf_A 210 VRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGT 289 (403)
T ss_dssp EEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEE
T ss_pred EEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEE
Confidence 6665442 23456678889999863 244678898876533211100 0012359999999999999
Q ss_pred EEEEc-CCCCCccEEEEEEEec
Q psy3125 142 YECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 142 Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|+|.| |..+..+..+.|.|..
T Consensus 290 Y~C~a~n~~g~~~~~~~l~V~~ 311 (403)
T 3laf_A 290 YTCVVTYKNENISASAELTVLV 311 (403)
T ss_dssp EEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEEEEEC
Confidence 99999 8888888888888863
No 164
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.68 E-value=5.1e-16 Score=112.64 Aligned_cols=150 Identities=9% Similarity=0.196 Sum_probs=95.5
Q ss_pred CceEEecC--C-CcEEEEEecCCe-e--E-Eec---c-eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLH-I--L-TTN---I-YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~-~--~-~~~---~-~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. + +.|.|+|.+.+. + + ... . ... ...+|+.+..+...+.++|.|.+++.+|+|.|+|++.
T Consensus 20 L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 99 (344)
T 1za6_B 20 ISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSEDTAVYFCTRS 99 (344)
T ss_dssp EEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEET
T ss_pred EEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEe
Confidence 68999987 3 899999864222 1 1 110 0 001 1257888876434567899999999999999999995
Q ss_pred CCC-CeeEEEEEEEEcCC---Cce-------EeeCCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe-----cCCCC---
Q psy3125 68 TEP-KMNMAIMLNVDDRG---RGA-------RLSAGPLLNFAFPDL---LT-TNIYTYTGDARFSVI-----HPQNS--- 124 (163)
Q Consensus 68 ~~~-~~~~~~~l~V~~~~---~~~-------~v~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~-----~~~~~--- 124 (163)
+.. .....+.|.|...+ +.+ .+..|..+.+.|... +. ..+.|++++...... .....
T Consensus 100 n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 179 (344)
T 1za6_B 100 LNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS 179 (344)
T ss_dssp TTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEE
T ss_pred cCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEE
Confidence 532 33345677776321 111 123677889999642 32 578898776531100 00111
Q ss_pred ceEEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 125 DEWNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 125 ~~~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
....|.|.+++.+| |.|+|.| |..+.
T Consensus 180 ~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 180 LSSVVTVPSSSLGT-QTYICNVNHKPSN 206 (344)
T ss_dssp EEEEEEEETTHHHH-BCEEEEEEEGGGT
T ss_pred EEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 23469999999888 9999999 66554
No 165
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.68 E-value=1.5e-15 Score=118.27 Aligned_cols=140 Identities=14% Similarity=0.247 Sum_probs=99.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CC-CeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EP-KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~-~~~~~~~ 77 (163)
|.|.+.+ | +.|.|+| ++.. +..+.|+.+.. .+.+|.|.+++.+|+|.|+|.+.+ .+ ..+..+.
T Consensus 131 l~C~~~~-p~~~v~W~~--~g~~-------l~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~ 196 (642)
T 1e07_A 131 FTCEPET-QDATYLWWV--NNQS-------LPVSPRLQLSN----GNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVI 196 (642)
T ss_pred EEEECCC-CCeeEEEEE--CCeE-------CCCCCceEEcC----CCCEEEEeCCCcccCeeEEEEEecCCCCcccceEE
Confidence 5799999 7 9999998 3222 22345666543 245799999999999999999954 22 2355677
Q ss_pred EEEEcCCCc-------eEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 78 LNVDDRGRG-------ARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 78 l~V~~~~~~-------~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
|.|...+.. ..+..|..+.+.|.. .+.+.+.|++++..+. ....|.|.+++.+|+|.|+|.| |
T Consensus 197 l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~-------~~~~L~i~~~~~~d~G~Y~C~a~n 269 (642)
T 1e07_A 197 LNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQ-------STQELFIPNITVNNSGSYTCQAHN 269 (642)
T ss_pred EEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcc-------cCCceEEecccccCCeEEEEEEEe
Confidence 888754322 245667889999974 4456889998776442 1234999999999999999999 7
Q ss_pred CCCCcc--EEEEEEEe
Q psy3125 148 TEPKMN--MAIMLNVD 161 (163)
Q Consensus 148 ~~~~~~--~~~~L~V~ 161 (163)
..+... ..+.|.|.
T Consensus 270 ~~g~~~~s~~~~v~v~ 285 (642)
T 1e07_A 270 SDTGLNRTTVTTITVY 285 (642)
T ss_pred CCCceEEeeeEEEEEE
Confidence 766544 34555554
No 166
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=1.6e-15 Score=105.10 Aligned_cols=156 Identities=13% Similarity=0.157 Sum_probs=97.5
Q ss_pred CceEEecC--C-CcEEEEEecCC---e-eEEec---ceEec---CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---H-ILTTN---IYTYT---GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~-~~~~~---~~~~~---~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. + ..|.|+|.+.+ . ++... ...+. ..+||.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 21 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 100 (242)
T 1hxm_B 21 LECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALW 100 (242)
T ss_dssp EEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeee
Confidence 68999986 5 89999996432 1 22111 11111 357998876443468999999999999999999995
Q ss_pred CCC--------CeeEEEEEEEEcCC------CceE--------eeCCCeEEEecCCC---C-ceeEEEEeCCC-eEEEe-
Q psy3125 68 TEP--------KMNMAIMLNVDDRG------RGAR--------LSAGPLLNFAFPDL---L-TTNIYTYTGDA-RFSVI- 119 (163)
Q Consensus 68 ~~~--------~~~~~~~l~V~~~~------~~~~--------v~~~~~~~~~~~~~---~-~~~~~~~~~~~-~~~~~- 119 (163)
+.. .....+.|.|...+ +.+. +..|..+.+.|... + ...+.|++++. .+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~ 180 (242)
T 1hxm_B 101 EAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQ 180 (242)
T ss_dssp EECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCE
T ss_pred cCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCcc
Confidence 432 12235678887631 1121 22367788888642 3 26788988775 22100
Q ss_pred -----cCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 120 -----HPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 120 -----~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
...+ .....|.|.++.. | |.|+|.| +..+.......+
T Consensus 181 ~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~ 225 (242)
T 1hxm_B 181 EGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEI 225 (242)
T ss_dssp ECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEE
T ss_pred ccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEe
Confidence 1111 1134699988876 5 9999999 766655444443
No 167
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.67 E-value=1.4e-15 Score=113.11 Aligned_cols=151 Identities=13% Similarity=0.260 Sum_probs=91.9
Q ss_pred CceEEec-CC-C-cEEEEEecCCeeEEecce---E--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC
Q psy3125 1 MACTVMG-LG-R-PVSWMRKRDLHILTTNIY---T--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK 71 (163)
Q Consensus 1 l~C~~~~-~~-~-~v~W~k~~~~~~~~~~~~---~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~ 71 (163)
|.|.+.+ .| + .|.|+| ++..+..+.. . ...+++|.. ..+|.|.+++.+|+|.|+|.+.+ ...
T Consensus 136 l~C~~~g~~p~~~~v~W~k--~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 206 (438)
T 1qgc_4 136 VVCFLNNFYPKDINVKWKI--DGSERQNGVLNSWTDQDSKDSTYSM-------SSTLTLTKDEYERHNSYTCEATHKTST 206 (438)
T ss_dssp EEEEEEEEBSSCEEEEEEE--TTEEECTTEEEEEECCCTTTCCEEE-------EEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred EEEEEccccCCCcEEEEEE--CCEEcCCCceeccccccCCCCcEEE-------EEEEEEeCcccCCCCeEEEEEEecccC
Confidence 5799987 56 6 899998 4333321100 0 011222222 34699999999999999999954 333
Q ss_pred eeEEEEEE-------EEcCCCceEeeCCCeEEEecCCC--C--ceeEEEEeC--CC-----------------------e
Q psy3125 72 MNMAIMLN-------VDDRGRGARLSAGPLLNFAFPDL--L--TTNIYTYTG--DA-----------------------R 115 (163)
Q Consensus 72 ~~~~~~l~-------V~~~~~~~~v~~~~~~~~~~~~~--~--~~~~~~~~~--~~-----------------------~ 115 (163)
......+. +.. +....+..|..+.+.|... + ...+.|++. +. |
T Consensus 207 ~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r 285 (438)
T 1qgc_4 207 SPIVKSFNRNECEVMLVE-SGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGR 285 (438)
T ss_dssp SCEEEEEETTC-CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTT
T ss_pred CceecccccccceeEEec-CCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCc
Confidence 22222221 111 2345677889999999642 2 457888875 22 2
Q ss_pred EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC-----CccEEEEEEEe
Q psy3125 116 FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP-----KMNMAIMLNVD 161 (163)
Q Consensus 116 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-----~~~~~~~L~V~ 161 (163)
+.+..........|.|.+++.+|+|.|+|.| |..+ .....+.|.|.
T Consensus 286 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~ 337 (438)
T 1qgc_4 286 FTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVS 337 (438)
T ss_dssp EEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEEC
T ss_pred EEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEe
Confidence 3322222233568999999999999999999 6332 33344566664
No 168
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.67 E-value=6.8e-16 Score=111.00 Aligned_cols=149 Identities=15% Similarity=0.249 Sum_probs=94.1
Q ss_pred CceEEecC-C-CcEEEEEecCC--eeEEecceEecCCCeEEEeccCC---CCeEEEEEcccCcCCCeeEEEEeeCCCC--
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL--HILTTNIYTYTGDARFSVIHPQN---SDEWNMKIDYAQKRDAGIYECQVNTEPK-- 71 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~--~~~~~~~~~~~~~~r~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-- 71 (163)
|.|.+.+. | +.|.|+|.+.. ..+..... ...+|+.+..... ....+|.|.+++.+|+|.|+|.+.+...
T Consensus 23 L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~--~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 100 (327)
T 2wng_A 23 LHCTVTSLIPVGPIQWFRGAGPARELIYNQKE--GHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPD 100 (327)
T ss_dssp ECCEESCCCSCCCEEEEESCSTTCEEEEETTS--SCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESSTTC
T ss_pred EEEEccCcCCCceEEEEECCCCCceEEEEcCC--CCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCCcc
Confidence 68999998 7 99999984322 11111110 1234666553211 3567899999999999999999954321
Q ss_pred ----eeEEEEEEEEcCCCce-------EeeCCCeEEEecCCC--Cc--eeEEEEeCCCeEEEe-----cC-CC---CceE
Q psy3125 72 ----MNMAIMLNVDDRGRGA-------RLSAGPLLNFAFPDL--LT--TNIYTYTGDARFSVI-----HP-QN---SDEW 127 (163)
Q Consensus 72 ----~~~~~~l~V~~~~~~~-------~v~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~-----~~-~~---~~~~ 127 (163)
....+.|.|...+..+ .+..|..+.+.|... +. ..+.|++++..+... .. .. ....
T Consensus 101 ~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s 180 (327)
T 2wng_A 101 TEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHS 180 (327)
T ss_dssp EEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEE
T ss_pred eeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEE
Confidence 1245678887664332 345678889999632 22 378899886543211 11 11 1133
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
.|.|.....+|+|.|+|.| |..+.
T Consensus 181 ~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 181 TAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EEEEECCTTGGGCEEEEEEECTTSC
T ss_pred EEEEechhcCcCceEEEEEeccccC
Confidence 5888888888899999999 66554
No 169
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.67 E-value=4.3e-16 Score=105.89 Aligned_cols=155 Identities=15% Similarity=0.189 Sum_probs=88.2
Q ss_pred CceEEecC--C-CcEEEEEecCCee---E-Ee-cc-e-E--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLHI---L-TT-NI-Y-T--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~~---~-~~-~~-~-~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + +.|.|+|.+.... + .. .. . . ....+||.+.. ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 19 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~ 96 (215)
T 3nl4_H 19 LACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK--TSTTVDLKITSPTTEDTATYFCVRKY 96 (215)
T ss_dssp EEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE--CSSEEEEEESSCCGGGCEEEEEEEEC
T ss_pred EEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe--eCCEEEEEECCCCcccCEEEEEEEec
Confidence 68999874 3 8999998643221 1 11 11 0 0 11257888876 45688999999999999999999955
Q ss_pred CCC-----eeEEEEEEEEcC-C--Cce-------EeeCCCeEEEecCCC----CceeEEEEeCCCeEEEecC----CCCc
Q psy3125 69 EPK-----MNMAIMLNVDDR-G--RGA-------RLSAGPLLNFAFPDL----LTTNIYTYTGDARFSVIHP----QNSD 125 (163)
Q Consensus 69 ~~~-----~~~~~~l~V~~~-~--~~~-------~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~ 125 (163)
... ....+.|.|... . +.+ .+..|..+.+.|... ....+.|++++........ ....
T Consensus 97 ~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g 176 (215)
T 3nl4_H 97 GSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSG 176 (215)
T ss_dssp SSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTS
T ss_pred CCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCC
Confidence 322 344456777621 1 111 123466788888532 2334668876642111100 1111
Q ss_pred eEEEEe---cccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 126 EWNMKI---DYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 126 ~~~L~i---~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
. +.| -.+...| |.|+|.| +..+.....+.|.+
T Consensus 177 ~--~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 177 L--YSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp C--EEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred C--EEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 1 222 3466667 9999999 77676666666554
No 170
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.67 E-value=6.8e-16 Score=104.53 Aligned_cols=152 Identities=16% Similarity=0.159 Sum_probs=94.6
Q ss_pred CceEEecCC----CcEEEEEecC-Cee--EEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC
Q psy3125 1 MACTVMGLG----RPVSWMRKRD-LHI--LTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK 71 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~-~~~--~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 71 (163)
|.|.+.+.+ +.|.|+|.+. ..+ +....... ...+||.+.. ..+..+|.|.+++.+|+|.|.|.+.+...
T Consensus 20 L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 97 (212)
T 1q0x_L 20 LTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL--IGDKAALTITGAQTEDEAIYFCALWSNNK 97 (212)
T ss_dssp EEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEECSSC
T ss_pred EEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe--eCCEEEEEECCCCccCCEEEEEEEecCch
Confidence 689999865 6899998642 221 11111111 1246887765 34578999999999999999999965332
Q ss_pred --eeEEEEEEEEcC---CCceEe-------eCCCeEEEecCCC---Cc-eeEEEEeCCCeEEE-------ecCCC---Cc
Q psy3125 72 --MNMAIMLNVDDR---GRGARL-------SAGPLLNFAFPDL---LT-TNIYTYTGDARFSV-------IHPQN---SD 125 (163)
Q Consensus 72 --~~~~~~l~V~~~---~~~~~v-------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~-------~~~~~---~~ 125 (163)
....+.|.|... ++.+.+ ..|..+.+.|... +. ..+.|++++..+.. ..... ..
T Consensus 98 ~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~ 177 (212)
T 1q0x_L 98 LVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMA 177 (212)
T ss_dssp EEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEE
T ss_pred hhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEE
Confidence 233445666422 222222 1466888999642 22 37899987654321 00111 12
Q ss_pred eEEEEecccCcCCCeeEEEEc-CCCCCccE
Q psy3125 126 EWNMKIDYAQKRDAGIYECQV-NTEPKMNM 154 (163)
Q Consensus 126 ~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~ 154 (163)
...|.|.++..+|+|.|+|.| +.......
T Consensus 178 ~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 178 SSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp EEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred EEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 346999999999999999999 66544333
No 171
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.66 E-value=3.7e-16 Score=124.54 Aligned_cols=151 Identities=15% Similarity=0.217 Sum_probs=102.1
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~ 77 (163)
|.|.+.+.+ +.|.|+| ++..+. .+.++.+... .....+|.|.+++.+|+|.|+|.+. ..+.....+.
T Consensus 639 L~C~~~~~~~~~~i~W~~--~g~~l~-------~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 708 (816)
T 3dmk_A 639 LHCSVPGGDLPLNIDWTL--DGQAIS-------EDLGITTSRV-GRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTP 708 (816)
T ss_dssp EEEBCCCSSSCCEEEEEE--TTBCCC-------GGGTCEEEEE-TTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCCCCEEEEEE--CCeEcC-------CCCCeeEEEc-CCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEE
Confidence 579998666 5899998 332221 1223333221 2346789999999999999999994 4555666777
Q ss_pred EEEEcC------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEE-----EecCC--CCceEEEEecccCcCCCeeE
Q psy3125 78 LNVDDR------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFS-----VIHPQ--NSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 78 l~V~~~------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~L~i~~v~~~D~G~Y 142 (163)
|.|..+ +....+..|..+.+.|.. .+.+.+.|++++.... +.... ......|.|.+++.+|+|.|
T Consensus 709 l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 788 (816)
T 3dmk_A 709 LNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYY 788 (816)
T ss_dssp ECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEE
T ss_pred EEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEE
Confidence 777654 334566778889999964 3556788887643210 00000 00123699999999999999
Q ss_pred EEEc-CCCCCccEEEEEEEe
Q psy3125 143 ECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 143 ~C~a-~~~~~~~~~~~L~V~ 161 (163)
+|.| |..|.....+.+...
T Consensus 789 ~C~a~N~~G~~~~~v~~~~~ 808 (816)
T 3dmk_A 789 LCEAINGIGSGLSAVIMISV 808 (816)
T ss_dssp EEEEECSSSSCEEEEEEEEE
T ss_pred EEEEEeCCCCCcEEEEEEEe
Confidence 9999 999999888876543
No 172
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.66 E-value=1e-16 Score=114.60 Aligned_cols=141 Identities=12% Similarity=0.136 Sum_probs=92.8
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|.+.+.+ +.|.|+|.+....+. .....|+.... .+|.|.+++.+|+|.|+|.+.+ .+.....+.
T Consensus 25 L~C~~~~~~~~~~v~W~k~~~~~~~~-----~~~~~~~~~~~------~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (315)
T 1itb_B 25 RPCPLNPNEHKGTITWYKDDSKTPVS-----TEQASRIHQHK------EKLWFVPAKVEDSGHYYCVVRNSSYCLRIKIS 93 (315)
T ss_dssp CBCCCCSCCCSSCCCEECTTSCSCSC-----CCTTSSSEECS------SBEECTTCCGGGCSCCEECCCSSSCCCCEECC
T ss_pred EEeeccCcCCCceEEEEeCCCcCccc-----cccCCcEeccC------CeEEECCCChhhCEEEEEEEeCCceEEEEEEE
Confidence 689999887 899999843211110 11244555432 2699999999999999999943 444455555
Q ss_pred EEEEcCCCc----------eEeeCCCeEEEecCC--------CCceeEEEEeCCCeEEEecC-CCCceEEEEecccCcCC
Q psy3125 78 LNVDDRGRG----------ARLSAGPLLNFAFPD--------LLTTNIYTYTGDARFSVIHP-QNSDEWNMKIDYAQKRD 138 (163)
Q Consensus 78 l~V~~~~~~----------~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D 138 (163)
+.|...++. ..+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|
T Consensus 94 v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d 173 (315)
T 1itb_B 94 AKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKH 173 (315)
T ss_dssp CEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGG
T ss_pred EEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehh
Confidence 565543222 346678889999964 34568899988765421110 01112369999999999
Q ss_pred CeeEEEEc-C-CCCCc
Q psy3125 139 AGIYECQV-N-TEPKM 152 (163)
Q Consensus 139 ~G~Y~C~a-~-~~~~~ 152 (163)
+|.|+|.| + ..+..
T Consensus 174 ~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 174 RGNYTCHASYTYLGKQ 189 (315)
T ss_dssp CEEEEEEEEEEETTEE
T ss_pred CcEEEEEEEcCCCCcE
Confidence 99999999 3 44544
No 173
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.66 E-value=1.7e-15 Score=104.88 Aligned_cols=148 Identities=14% Similarity=0.207 Sum_probs=93.0
Q ss_pred CceEEecCC-CcEEEEEecCC----eeEEec---ceEecC---CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL----HILTTN---IYTYTG---DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~----~~~~~~---~~~~~~---~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.... .++... ...... .+|+.+... ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 21 L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 99 (246)
T 4dzb_B 21 IECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA-SLTLSTLTVTSAHPEDSSFYICSARTS 99 (246)
T ss_dssp EEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEE-ETTEEEEEECSCCGGGCEEEEEEECCS
T ss_pred EEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEec-CCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 689999999 99999984321 122211 111111 268888753 245889999999999999999999532
Q ss_pred C-----CeeEEEEEEEEcC-----CCceEe--------eCCCeEEEecCCC---C-ceeEEEEeCCCeEEEe----cCC-
Q psy3125 70 P-----KMNMAIMLNVDDR-----GRGARL--------SAGPLLNFAFPDL---L-TTNIYTYTGDARFSVI----HPQ- 122 (163)
Q Consensus 70 ~-----~~~~~~~l~V~~~-----~~~~~v--------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~----~~~- 122 (163)
. .....+.|.|... ++.+.+ ..|..+.+.|... + ...+.|++++..+... ...
T Consensus 100 ~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 179 (246)
T 4dzb_B 100 GDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPL 179 (246)
T ss_dssp SGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCE
T ss_pred CCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccc
Confidence 1 2334556777741 122222 2267788889632 1 2378898876543210 000
Q ss_pred ------CCc----eEEEEecccCcCC-CeeEEEEc-CCC
Q psy3125 123 ------NSD----EWNMKIDYAQKRD-AGIYECQV-NTE 149 (163)
Q Consensus 123 ------~~~----~~~L~i~~v~~~D-~G~Y~C~a-~~~ 149 (163)
... ...|.|.....+| +|.|+|.| +..
T Consensus 180 ~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~ 218 (246)
T 4dzb_B 180 KEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 218 (246)
T ss_dssp ESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred cccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecC
Confidence 111 2348999998888 99999999 553
No 174
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.66 E-value=1.4e-15 Score=104.43 Aligned_cols=156 Identities=13% Similarity=0.186 Sum_probs=95.5
Q ss_pred CceEEecCC-----CcEEEEEecCCe----eEEe---cceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe
Q psy3125 1 MACTVMGLG-----RPVSWMRKRDLH----ILTT---NIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 66 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~~~----~~~~---~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~ 66 (163)
|.|.+.+.+ +.|.|+|.+.+. ++.. +...+. ..+|+.+..+...++++|.|.+++.+|+|.|.|++
T Consensus 20 L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 99 (228)
T 3bae_H 20 LTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTADTATYYCAR 99 (228)
T ss_dssp EEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEE
Confidence 689999876 679999864221 1211 111111 24689887644445799999999999999999999
Q ss_pred eCCC----------CeeEEEEEEEEcC---CCce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeE---EEe
Q psy3125 67 NTEP----------KMNMAIMLNVDDR---GRGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARF---SVI 119 (163)
Q Consensus 67 ~~~~----------~~~~~~~l~V~~~---~~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~---~~~ 119 (163)
.+.. .....+.|.|... ++.+ .+..|..+.+.|... +.+ .+.|++++... ...
T Consensus 100 ~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~ 179 (228)
T 3bae_H 100 RGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFP 179 (228)
T ss_dssp EEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEE
T ss_pred ecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcC
Confidence 5432 1123467777742 1111 123577888899642 333 78888776531 100
Q ss_pred --cCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 120 --HPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 120 --~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
.... .....|.|.++..+| |.|+|.| |..+.......
T Consensus 180 ~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 180 AVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp EEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 0011 123469999998866 9999999 76665444333
No 175
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=103.67 Aligned_cols=152 Identities=13% Similarity=0.176 Sum_probs=93.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+..+ ...|+.+... ....+|.|.+++.+|+|.|.|.+ +..+.....+.|
T Consensus 38 l~C~~~g~p~p~i~W~~--~g~~l~~~-----~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 108 (215)
T 3mtr_A 38 ITCEVFAYPSATISWFR--DGQLLPSS-----NYSNIKIYNT--PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFIL 108 (215)
T ss_dssp EEEEEEEESCCEEEEEE--TTEESSCS-----SSCSEEEEEE--TTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEEeecCCCEEEEEE--CCeECCCC-----CCccEEEecC--CCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEE
Confidence 689999999 9999998 33322211 1246666542 34788999999999999999999 445666677778
Q ss_pred EEEcCCCceEe----eCCCeEEEecCCC-----Cce---eEEEEeCCCe-EEE---ecCCCCceEEEEecccCcCCCeeE
Q psy3125 79 NVDDRGRGARL----SAGPLLNFAFPDL-----LTT---NIYTYTGDAR-FSV---IHPQNSDEWNMKIDYAQKRDAGIY 142 (163)
Q Consensus 79 ~V~~~~~~~~v----~~~~~~~~~~~~~-----~~~---~~~~~~~~~~-~~~---~~~~~~~~~~L~i~~v~~~D~G~Y 142 (163)
.|..++..+.. ..+..+.+.|... ... .+.|...+.. +.. ..........|.|.++...|.|.|
T Consensus 109 ~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~ 188 (215)
T 3mtr_A 109 VQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAV 188 (215)
T ss_dssp EECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEE
T ss_pred EECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEE
Confidence 88766433221 1233444444211 111 2344443321 110 000001124699999999999999
Q ss_pred EEEc-CCCCCccEEEEEEEe
Q psy3125 143 ECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 143 ~C~a-~~~~~~~~~~~L~V~ 161 (163)
+|.| |..|....+..+.|.
T Consensus 189 ~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 189 RLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp EEEEEESSCBCCCCCCEEEE
T ss_pred EEEEEeCCcccCcccceeeE
Confidence 9999 887766555554443
No 176
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.65 E-value=1.4e-15 Score=104.60 Aligned_cols=159 Identities=11% Similarity=0.181 Sum_probs=95.1
Q ss_pred CceEEecCC---CcE--EEEEecCCe---eE-Ee--cce---E---ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEE
Q psy3125 1 MACTVMGLG---RPV--SWMRKRDLH---IL-TT--NIY---T---YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYE 63 (163)
Q Consensus 1 l~C~~~~~~---~~v--~W~k~~~~~---~~-~~--~~~---~---~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 63 (163)
|.|.+.+.+ ..+ .|+|..... .+ .. .+. . ....+||.+..+...++++|.|.+++.+|+|.|.
T Consensus 20 L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 99 (232)
T 3qhz_H 20 LTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNMDPVDTATYY 99 (232)
T ss_dssp EEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred EEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcCChhhCEEEE
Confidence 689998643 455 999864321 12 11 111 0 1124699888655567899999999999999999
Q ss_pred EEeeCC---------CCeeEEEEEEEEcC-C--Cce-------EeeCCCeEEEecCCC---C-ceeEEEEeCCCeE--E-
Q psy3125 64 CQVNTE---------PKMNMAIMLNVDDR-G--RGA-------RLSAGPLLNFAFPDL---L-TTNIYTYTGDARF--S- 117 (163)
Q Consensus 64 C~~~~~---------~~~~~~~~l~V~~~-~--~~~-------~v~~~~~~~~~~~~~---~-~~~~~~~~~~~~~--~- 117 (163)
|.+.+. ......+.|.|... . +.+ .+..|..+.+.|... + ...+.|++++... .
T Consensus 100 C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~ 179 (232)
T 3qhz_H 100 CARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHT 179 (232)
T ss_dssp EEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred EEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceee
Confidence 999643 22334456777521 1 111 123466788888532 2 3346687766421 1
Q ss_pred ---EecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 118 ---VIHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 118 ---~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
...... ...+.|.|.+...+| |.|+|.| +..+.......|.+
T Consensus 180 ~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 180 FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred ccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 011111 123469999999999 9999999 76666666666654
No 177
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.65 E-value=1.2e-15 Score=114.59 Aligned_cols=152 Identities=11% Similarity=0.170 Sum_probs=96.1
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Ee---cc-eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TT---NI-YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~---~~-~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+. .+ .. +. ... ...+|+.+..+...+.++|.|.+++.+|+|.|+|++.
T Consensus 20 L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 99 (457)
T 1hzh_H 20 VSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARV 99 (457)
T ss_dssp ECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEe
Confidence 689999874 789999864321 11 11 11 111 1257898876434567899999999999999999995
Q ss_pred CCC-------------CeeEEEEEEEEcCC---Cc-------eEeeCCCeEEEecCCC---Cc-eeEEEEeCCCe-----
Q psy3125 68 TEP-------------KMNMAIMLNVDDRG---RG-------ARLSAGPLLNFAFPDL---LT-TNIYTYTGDAR----- 115 (163)
Q Consensus 68 ~~~-------------~~~~~~~l~V~~~~---~~-------~~v~~~~~~~~~~~~~---~~-~~~~~~~~~~~----- 115 (163)
+.. .....+.|.|.... +. ..+..|..+.+.|... +. ..+.|++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~ 179 (457)
T 1hzh_H 100 GPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHT 179 (457)
T ss_dssp CCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEE
T ss_pred cCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceE
Confidence 432 22345567776421 11 1234677889999632 22 56888877632
Q ss_pred EEEecCCCC---ceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 116 FSVIHPQNS---DEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 116 ~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
+........ ....|.|.+++.+| |.|+|.| |..+...
T Consensus 180 ~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 180 FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 220 (457)
T ss_dssp EEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE
T ss_pred cCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc
Confidence 111111111 23469999999999 9999999 6555433
No 178
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.65 E-value=1.6e-15 Score=120.94 Aligned_cols=147 Identities=20% Similarity=0.262 Sum_probs=104.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccC-cCCCeeEEEEeeC-CC-CeeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQ-KRDAGIYECQVNT-EP-KMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~~~~-~~-~~~~~~ 76 (163)
|.|.+.+.| +.|.|+| ++..+ ....++.+.. +.+|.|.++. .+|+|.|+|.+.+ .+ ..+..+
T Consensus 546 l~C~~~g~p~~~i~W~k--~~~~l-------~~~~~~~~~~-----~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~ 611 (816)
T 3dmk_A 546 VTCPVAGYPIDSIVWER--DNRAL-------PINRKQKVFP-----NGTLIIENVERNSDQATYTCVAKNQEGYSARGSL 611 (816)
T ss_dssp EECCEECSSEEEEEEEE--TTEES-------CCSTTEEECT-----TSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEE
T ss_pred EEEEecCCCCCEEEEEE--CCeEc-------ccCCceEEec-----CCeEEEEecCccccCEEEEEEEEECCCceeeeeE
Confidence 579999999 9999998 33222 2334444432 3479999998 6999999999954 33 234556
Q ss_pred EEEEEcCCC-------ceEeeCCCeEEEecCCC---CceeEEEEeCCCeEE------EecCCCCceEEEEecccCcCCCe
Q psy3125 77 MLNVDDRGR-------GARLSAGPLLNFAFPDL---LTTNIYTYTGDARFS------VIHPQNSDEWNMKIDYAQKRDAG 140 (163)
Q Consensus 77 ~l~V~~~~~-------~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~L~i~~v~~~D~G 140 (163)
.|.|..++. ...+..|..+.+.|... ....+.|++++..+. ... .......|.|.+++.+|+|
T Consensus 612 ~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G 690 (816)
T 3dmk_A 612 EVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSR-VGRRGSVLTIEAVEASHAG 690 (816)
T ss_dssp EEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEE-ETTTEEEEEEESCCGGGCE
T ss_pred EEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEE-cCCCeeEEEEccCChhhCE
Confidence 677765532 23466788999999742 234789998876432 111 1234567999999999999
Q ss_pred eEEEEc-CCCCCccEEEEEEEec
Q psy3125 141 IYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 141 ~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.|+|.| |..|..+..+.|.|..
T Consensus 691 ~Y~C~a~N~~g~~~~~~~l~V~~ 713 (816)
T 3dmk_A 691 NFTCHARNLAGHQQFTTPLNVYV 713 (816)
T ss_dssp EEEEEEECSSCEEEEEEEECEEE
T ss_pred EEEEEEEeCCccEEEEEEEEEEe
Confidence 999999 8889988888888763
No 179
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.65 E-value=8.9e-18 Score=132.78 Aligned_cols=162 Identities=16% Similarity=0.238 Sum_probs=0.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEec-C-CCeE--------EEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYT-G-DARF--------SVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT- 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~-~-~~r~--------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~- 68 (163)
|.|.+.+.| +.|.|+|.+.. +......... . ..++ .+.........+|.|.+++.+|+|.|+|.+.+
T Consensus 569 l~C~~~~~p~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 647 (772)
T 3v2a_R 569 LWCTADRSTFENLTWYKLGPQ-PLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDR 647 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEeccCCCCCCcEEEEcCCc-ccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeC
Confidence 689999999 99999984322 2111100000 0 0000 00111112345699999999999999999954
Q ss_pred CCC--eeEEEEEEEE--cCC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC--CCCceEEEEeccc
Q psy3125 69 EPK--MNMAIMLNVD--DRG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP--QNSDEWNMKIDYA 134 (163)
Q Consensus 69 ~~~--~~~~~~l~V~--~~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v 134 (163)
.+. .+....|.|. .++ ....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.++
T Consensus 648 ~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v 727 (772)
T 3v2a_R 648 KTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRV 727 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcC
Confidence 222 1233444443 222 22345668888899964 34568899988765432211 1122467999999
Q ss_pred CcCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 135 QKRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 135 ~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
+.+|+|.|+|.| |..|..+.++.|.|.++
T Consensus 728 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 757 (772)
T 3v2a_R 728 RKEDEGLYTCQACSVLGCAKVEAFFIIEGA 757 (772)
T ss_dssp ------------------------------
T ss_pred CHHHCEEEEEEEEeCCcceeEEEEEEEECC
Confidence 999999999999 99999999999999874
No 180
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.65 E-value=2.2e-15 Score=112.49 Aligned_cols=148 Identities=11% Similarity=0.046 Sum_probs=83.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|++.+ ..+ ....++... .....+|.|.+++.+|+|.|+|.+.+ .+.....+.|
T Consensus 68 L~C~v~g~P~p~i~W~~~~--~~l-------~~~~~~~~~---~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 135 (423)
T 3qs7_E 68 LQVLVDAPGNISCLWVFKH--SSL-------NCQPHFDLQ---NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135 (423)
T ss_dssp EEEECSCCSSCEEEEEETT--EEE-------CCCCBC--------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEE
T ss_pred EEEEEEcCCCCeEEEEECC--Ccc-------Cccceeccc---cceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEE
Confidence 689999999 999999832 111 111111100 12245799999999999999999954 4555666777
Q ss_pred EEEcCCCc-----eEeeCCCeEEEecC--CCCceeEEEEeCCCeEEEecCCCCceEEEEec-ccCcCCCeeEEEEc-CCC
Q psy3125 79 NVDDRGRG-----ARLSAGPLLNFAFP--DLLTTNIYTYTGDARFSVIHPQNSDEWNMKID-YAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 79 ~V~~~~~~-----~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~-~v~~~D~G~Y~C~a-~~~ 149 (163)
.|..++.. ..+..+....+.|. ..+.+.+.|++++......... .....+... -.+..|+|.|+|.| |..
T Consensus 136 ~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~-~~~~~~~~~~~l~~~d~G~Y~C~A~N~~ 214 (423)
T 3qs7_E 136 SIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEE-SPAVVKKEEKVLHELFGTDIRCCARNEL 214 (423)
T ss_dssp EEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSCEEEEEECSS
T ss_pred EEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccc-ccccccccceEEecccCeEEEEEEEcCC
Confidence 77643211 12334555567775 3566788998876532111000 000011111 12678999999999 887
Q ss_pred CCccE-EEEEEEe
Q psy3125 150 PKMNM-AIMLNVD 161 (163)
Q Consensus 150 ~~~~~-~~~L~V~ 161 (163)
|.... .+.|.|.
T Consensus 215 G~~~~~~~~l~V~ 227 (423)
T 3qs7_E 215 GRECTRLFTIDLN 227 (423)
T ss_dssp CEEEEECEEEESS
T ss_pred CCcceeeEEEEEe
Confidence 76543 4667664
No 181
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.65 E-value=1.6e-15 Score=106.42 Aligned_cols=148 Identities=12% Similarity=0.177 Sum_probs=92.2
Q ss_pred CceEEecCC---CcEEEEEecCCe-e--E-Ee----cceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH-I--L-TT----NIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~-~--~-~~----~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+... + + .. +...+ ...+|+.+..+...++++|.|.+++.+|+|.|.|++.
T Consensus 26 L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 105 (261)
T 2xqy_G 26 MSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRL 105 (261)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEe
Confidence 689999875 899999964321 1 1 11 11111 1257898876433457899999999999999999996
Q ss_pred CCC----CeeEEEEEEEEcC---CCce-------EeeCCCeEEEecCCC---Cc-eeEEEEeCCCeEEEecC-----CC-
Q psy3125 68 TEP----KMNMAIMLNVDDR---GRGA-------RLSAGPLLNFAFPDL---LT-TNIYTYTGDARFSVIHP-----QN- 123 (163)
Q Consensus 68 ~~~----~~~~~~~l~V~~~---~~~~-------~v~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~-----~~- 123 (163)
+.. .....+.|.|... ++.+ .+..|..+.+.|... +. ..+.|++++..+..... ..
T Consensus 106 ~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~ 185 (261)
T 2xqy_G 106 GYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDL 185 (261)
T ss_dssp CTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTE
T ss_pred cCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCc
Confidence 542 1223456777642 1111 123467788888642 33 37888877653211100 01
Q ss_pred -CceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 124 -SDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 124 -~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
.....|.|.++..+| |.|+|.| +..
T Consensus 186 ~~~~s~L~i~~~~~~~-g~YtC~v~n~~ 212 (261)
T 2xqy_G 186 YTLSSSVTVTSSTWPS-QSITCNVAHPA 212 (261)
T ss_dssp EEEEEEEEEETTTTTT-SCCEEEEEEGG
T ss_pred EEEEEEEEEeccccCC-CEEEEEEEECC
Confidence 123569999999888 9999999 543
No 182
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.65 E-value=7.6e-17 Score=116.38 Aligned_cols=148 Identities=18% Similarity=0.299 Sum_probs=98.3
Q ss_pred CceE-----EecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CC---
Q psy3125 1 MACT-----VMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EP--- 70 (163)
Q Consensus 1 l~C~-----~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~--- 70 (163)
|.|. +.+.| +.|.|+| ++..+. ....++.+.. +..+|.|.+++.+|+|.|+|.+.+ .+
T Consensus 140 l~C~~~~~~~~g~p~~~v~W~k--~g~~~~------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 207 (339)
T 3o4o_C 140 LVCPDLSEFTRDKTDVKIQWYK--DSLLLD------KDNEKFLSVR----GTTHLLVHDVALEDAGYYRCVLTFAHEGQQ 207 (339)
T ss_dssp EECCSCTTTCCSSSCCCBCCEE--SSCBCC------TTCSSEEECT----TSSEEEESSCCGGGCEEEEEEEECCBTTBC
T ss_pred EEecCCcccccCCCCceEEEec--CCeeCC------CCCceeEEcC----CcceEEEcccCHhhCeEEEEEEEECCCCeE
Confidence 5788 77888 9999998 332221 1234666553 235799999999999999999954 22
Q ss_pred -CeeEEEEEEEEcCC-----------CceEeeCCCeEEEecCC---C--C-ceeEEEEeCCCe---------EEEecC--
Q psy3125 71 -KMNMAIMLNVDDRG-----------RGARLSAGPLLNFAFPD---L--L-TTNIYTYTGDAR---------FSVIHP-- 121 (163)
Q Consensus 71 -~~~~~~~l~V~~~~-----------~~~~v~~~~~~~~~~~~---~--~-~~~~~~~~~~~~---------~~~~~~-- 121 (163)
..+..+.|.|...+ ....+..|..+.+.|.. . + ...+.|+.++.. +.....
T Consensus 208 ~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~ 287 (339)
T 3o4o_C 208 YNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQE 287 (339)
T ss_dssp CEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEE
T ss_pred EEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEE
Confidence 34567778887432 22234567778888865 2 3 456677765542 221110
Q ss_pred --CCCc---eEEEEecccCcCCC-eeEEEEc-CCCCCccEEEEEEE
Q psy3125 122 --QNSD---EWNMKIDYAQKRDA-GIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 122 --~~~~---~~~L~i~~v~~~D~-G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
.... ...|.|.+++.+|+ |.|+|.| |..|..+..+.|.+
T Consensus 288 ~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 288 YSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred ecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 0111 22699999999998 9999999 98888887766654
No 183
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.65 E-value=1.1e-15 Score=112.44 Aligned_cols=149 Identities=19% Similarity=0.190 Sum_probs=93.2
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCee---E
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMN---M 74 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~---~ 74 (163)
|.|.+. +.+ +.+.|++ +...+ ..+.|..+.. .+.+|.|.+++.+|+|.|+|.+.+ ..... .
T Consensus 122 l~C~~~~~~~~~~~~W~~--~~~~~-------~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 188 (384)
T 3kld_A 122 LLCGPPPHSGELSYAWIF--NEYPS-------YQDNRRFVSQ----ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGP 188 (384)
T ss_dssp ECCCCCSEESCEEEEEEE--TTEEC-------CCSSSEEECT----TTCCEEESSCCGGGCEEEEEEEEETTTTEEEECC
T ss_pred EecCCCCCCCCeEEEEEE--CCCCC-------EeeccEEEEc----CCCcEEEeecCHHHCceEEEEEecccccceeeCC
Confidence 356544 334 7899998 32221 1233332222 244699999999999999999943 22211 1
Q ss_pred EEEEEEE--------------cCCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEec-CCCCceEEEEecccCcC
Q psy3125 75 AIMLNVD--------------DRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIH-PQNSDEWNMKIDYAQKR 137 (163)
Q Consensus 75 ~~~l~V~--------------~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~v~~~ 137 (163)
...+.+. ..+....+..|..+.+.|.. .+.+.+.|++.+....... ........|.|.+++.+
T Consensus 189 ~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~ 268 (384)
T 3kld_A 189 PTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQE 268 (384)
T ss_dssp CEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGG
T ss_pred ceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChh
Confidence 1112211 11234456778889999963 3556788987554221110 01122446999999999
Q ss_pred CCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 138 DAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 138 D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|+|.|+|.| |..|.....+.|.|..
T Consensus 269 D~G~Y~C~a~N~~G~~~~~~~l~v~~ 294 (384)
T 3kld_A 269 DAGSYECVAENSRGKNVAKGQLTFYA 294 (384)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred hCEEEEEEEEcCCCeEEEEEEEEEec
Confidence 999999999 8889888888888753
No 184
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.64 E-value=6.1e-16 Score=111.54 Aligned_cols=146 Identities=17% Similarity=0.168 Sum_probs=91.3
Q ss_pred CceEEecC---------C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCe-eEEEEeeCC
Q psy3125 1 MACTVMGL---------G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAG-IYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~---------~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C~~~~~ 69 (163)
|.|.+.+. | +.|.|+|.+.. +.. ..|. .. +.+|.|.+++.+|+| .|+|.+.+.
T Consensus 49 L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~-~~~--------~~~~-~~------~~~L~i~~v~~~D~Gs~Y~C~a~n~ 112 (329)
T 3oq3_B 49 AKCPPIEDSLLSHRYNDKDNVVNWEKIGKT-RRP--------LNRR-VK------NGDLWIANYTSNDSHRRYLCTVTTK 112 (329)
T ss_dssp ECCHHHHCTTTGGGSCCTTCEEEEEECSSS-CEE--------CSTT-EE------TTEEEESSCCGGGGGCCEEEEEECT
T ss_pred EEccCCCCccccccccCCCCeeEEEECCCC-ccc--------cCce-ee------cceEEEcCCChHhCCCcEEEEEEeC
Confidence 56887773 5 79999983322 111 1222 11 346999999999999 999999553
Q ss_pred -CCeeEEEEEEEEcCCCce-------EeeCCCeEEEecCC--CC-ceeEEEEeCCCeEEEecCC-CCceEEEEecccCcC
Q psy3125 70 -PKMNMAIMLNVDDRGRGA-------RLSAGPLLNFAFPD--LL-TTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKR 137 (163)
Q Consensus 70 -~~~~~~~~l~V~~~~~~~-------~v~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~ 137 (163)
+.......+.|...++.. .+..|..+.+.|.. .+ .+.+.|++++..+...... ......|.|.+++.+
T Consensus 113 ~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~ 192 (329)
T 3oq3_B 113 NGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELE 192 (329)
T ss_dssp TSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGG
T ss_pred CCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChh
Confidence 333333333444332221 13347789999964 34 5688999887644211100 011246999999999
Q ss_pred CCeeEEEEc-CC--CCCccEE----EEEEEec
Q psy3125 138 DAGIYECQV-NT--EPKMNMA----IMLNVDG 162 (163)
Q Consensus 138 D~G~Y~C~a-~~--~~~~~~~----~~L~V~~ 162 (163)
|+|.|+|.| |. .+..... +.|.|..
T Consensus 193 D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~ 224 (329)
T 3oq3_B 193 DSGRYDCYVHYDDVRIKNDIVVSRCKILTVIP 224 (329)
T ss_dssp GCEEEEEEEEECCTTSSSCEEEEEEEEEEEEC
T ss_pred hCEEEEEEEEecccCCCceeEEEeeEEEEEEC
Confidence 999999999 65 5544444 6777754
No 185
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.64 E-value=1.3e-15 Score=113.34 Aligned_cols=151 Identities=12% Similarity=0.160 Sum_probs=95.9
Q ss_pred CceEEecCC-C----cEEEEEecCCe---eEEecceE--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC
Q psy3125 1 MACTVMGLG-R----PVSWMRKRDLH---ILTTNIYT--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP 70 (163)
Q Consensus 1 l~C~~~~~~-~----~v~W~k~~~~~---~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 70 (163)
|.|.+.+.+ + .|.|+|.+.+. .+...... ....+|+.+.. ..+..+|.|.+++.+|+|.|+|++.+..
T Consensus 21 L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 98 (438)
T 1qgc_4 21 ISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG--SRTDFTLTIDPVEADDVATYYCQQSNEV 98 (438)
T ss_dssp EEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSST
T ss_pred EEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEc--cCCcEEEEeCCCcCcCCeeEEEEEecCC
Confidence 689999888 4 89999864221 11111111 11246887765 3457899999999999999999995432
Q ss_pred --CeeEEEEEEEEcC--CCceEee-------CCCeEEEecCC---CCce-eEEEEeCCCeEEE------ec--CCCC---
Q psy3125 71 --KMNMAIMLNVDDR--GRGARLS-------AGPLLNFAFPD---LLTT-NIYTYTGDARFSV------IH--PQNS--- 124 (163)
Q Consensus 71 --~~~~~~~l~V~~~--~~~~~v~-------~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~------~~--~~~~--- 124 (163)
.....+.|.|... ++.+.+. .|..+.+.|.. .+.+ .+.|++++..+.. .. ....
T Consensus 99 ~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
T 1qgc_4 99 PLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYS 178 (438)
T ss_dssp TCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEE
T ss_pred CccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEE
Confidence 2244556676542 2222221 25578899964 2333 7899987653321 11 1111
Q ss_pred ceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 125 DEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 125 ~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
....|.|.+++.+|+|.|+|.| |..+...
T Consensus 179 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 208 (438)
T 1qgc_4 179 MSSTLTLTKDEYERHNSYTCEATHKTSTSP 208 (438)
T ss_dssp EEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred EEEEEEEeCcccCCCCeEEEEEEecccCCc
Confidence 1357999999999999999999 7666543
No 186
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.64 E-value=2.7e-15 Score=103.79 Aligned_cols=147 Identities=14% Similarity=0.168 Sum_probs=91.8
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEecc-eE--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC----
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTTNI-YT--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT---- 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~~~-~~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~---- 68 (163)
|.|.+.+.+ +.|.|+|..... ++.... .. ....+|+.+... ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~ 99 (245)
T 3nfj_J 21 LECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRP-QDRQFILSSKKLLLSDSGFYLCAWSVSVGA 99 (245)
T ss_dssp EEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEE-ETTEEEEEESSCCGGGCEEEEEEEECCTTT
T ss_pred EEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEec-CCCEEEEEECCCChhhCEEEEEEEeeccCC
Confidence 689999988 999999953221 111110 00 112468887753 34688999999999999999999955
Q ss_pred -CC--CeeEEEEEEEEcC-----CCceEe--------eCCCeEEEecCCC----CceeEEEEeCCCeEEEec----C---
Q psy3125 69 -EP--KMNMAIMLNVDDR-----GRGARL--------SAGPLLNFAFPDL----LTTNIYTYTGDARFSVIH----P--- 121 (163)
Q Consensus 69 -~~--~~~~~~~l~V~~~-----~~~~~v--------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~--- 121 (163)
.. .....+.|.|... ++.+.+ ..|..+.+.|... ....+.|++++..+.... .
T Consensus 100 ~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 179 (245)
T 3nfj_J 100 GVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLK 179 (245)
T ss_dssp SSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEE
T ss_pred CceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCccccccccc
Confidence 11 2234556777751 122222 1266788888642 223677988765442100 0
Q ss_pred -----CCC---ceEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 122 -----QNS---DEWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 122 -----~~~---~~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
... ....|.|.....+| .|.|+|.| +.
T Consensus 180 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~ 216 (245)
T 3nfj_J 180 EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (245)
T ss_dssp SSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred ccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEEC
Confidence 111 12468999998888 66999999 54
No 187
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.63 E-value=5.2e-15 Score=101.72 Aligned_cols=159 Identities=11% Similarity=0.181 Sum_probs=96.7
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Eecc---e-E--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TTNI---Y-T--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~~~---~-~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..|.|+|..... .+ .... . . ....+||.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 99 (230)
T 3n9g_H 20 VSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARD 99 (230)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEc
Confidence 689998743 889999864321 11 1111 0 1 11247999887655678999999999999999999996
Q ss_pred CCC---------CeeEEEEEEEEcCC---Cce-------EeeCCCeEEEecCCC---C-ceeEEEEeCCCe---EEE---
Q psy3125 68 TEP---------KMNMAIMLNVDDRG---RGA-------RLSAGPLLNFAFPDL---L-TTNIYTYTGDAR---FSV--- 118 (163)
Q Consensus 68 ~~~---------~~~~~~~l~V~~~~---~~~-------~v~~~~~~~~~~~~~---~-~~~~~~~~~~~~---~~~--- 118 (163)
+.. .....+.|.|...+ +.+ .+..|..+.+.|... + ...+.| ..... ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W-~~~~~~~~~~~~~~ 178 (230)
T 3n9g_H 100 WGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-NSGALTSGVHTFPA 178 (230)
T ss_dssp CCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE-GGGTBCTTEEECCC
T ss_pred cCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE-CCcccCCCeEeCCc
Confidence 532 12244567775321 111 123567788888532 2 334677 22211 110
Q ss_pred -ecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 119 -IHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 119 -~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
..... ...+.|.|.+...+| |.|+|.| +..+.......|.|.
T Consensus 179 ~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 179 VLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp EECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred eECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 11111 123469999999999 9999999 666666666666554
No 188
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.63 E-value=2.4e-15 Score=104.08 Aligned_cols=159 Identities=13% Similarity=0.179 Sum_probs=95.0
Q ss_pred CceEEecCC-C----cEEEEEecCC---eeE-Eec--------ceE-e--cCCCeEEEeccCCCCeEEEEEcccCcCCCe
Q psy3125 1 MACTVMGLG-R----PVSWMRKRDL---HIL-TTN--------IYT-Y--TGDARFSVIHPQNSDEWNMKIDYAQKRDAG 60 (163)
Q Consensus 1 l~C~~~~~~-~----~v~W~k~~~~---~~~-~~~--------~~~-~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G 60 (163)
|.|.+.+.+ . .|.|+|.... ..+ ... ... . ...+||.+..+...+.++|.|.+++.+|+|
T Consensus 20 L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG 99 (239)
T 3tv3_H 20 LTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLNSVTAADTA 99 (239)
T ss_dssp EEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEECCCChhhCE
Confidence 689998765 4 7999996432 122 111 011 1 124799887644456899999999999999
Q ss_pred eEEEEeeCCC--------------CeeEEEEEEEEcC-CCc--e-------EeeCCCeEEEecCCC---C-ceeEEEEeC
Q psy3125 61 IYECQVNTEP--------------KMNMAIMLNVDDR-GRG--A-------RLSAGPLLNFAFPDL---L-TTNIYTYTG 112 (163)
Q Consensus 61 ~Y~C~~~~~~--------------~~~~~~~l~V~~~-~~~--~-------~v~~~~~~~~~~~~~---~-~~~~~~~~~ 112 (163)
.|.|.+.+.. .....+.|.|... +.. + .+..|..+.+.|... + ...+.|+++
T Consensus 100 ~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~ 179 (239)
T 3tv3_H 100 TYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 179 (239)
T ss_dssp EEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred EEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEEEC
Confidence 9999995321 1223345666522 111 1 123466778888532 2 234678776
Q ss_pred CCeEEE------ecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 113 DARFSV------IHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 113 ~~~~~~------~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
+..... ..... .....|.|.+...+| |.|+|.| +..+.......|.+
T Consensus 180 g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 180 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp TBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 642111 11111 113469999999999 9999999 66556555555554
No 189
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.63 E-value=5.6e-15 Score=110.45 Aligned_cols=155 Identities=11% Similarity=0.177 Sum_probs=97.3
Q ss_pred CceEEecCC---CcEEEEEecCCe-e---EEec---ceE---ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH-I---LTTN---IYT---YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~-~---~~~~---~~~---~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+. + +... ... ....+|+.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 99 (444)
T 1igt_B 20 LSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARH 99 (444)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEe
Confidence 689999873 889999864322 1 1110 000 01246888876444568899999999999999999996
Q ss_pred CCC-C---eeEEEEEEEEcC---CCce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEe--c---CCC-
Q psy3125 68 TEP-K---MNMAIMLNVDDR---GRGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVI--H---PQN- 123 (163)
Q Consensus 68 ~~~-~---~~~~~~l~V~~~---~~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~--~---~~~- 123 (163)
+.. . ....+.|.|... ++.+ .+..|..+.+.|... +.+ .+.|++++...... . ...
T Consensus 100 ~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~ 179 (444)
T 1igt_B 100 GGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDL 179 (444)
T ss_dssp CSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTE
T ss_pred cCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCc
Confidence 532 1 223456777632 1111 124677888999642 333 78888776541110 0 001
Q ss_pred -CceEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 124 -SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 124 -~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
.....|.|.+++.+| |.|+|.| |..+......
T Consensus 180 ~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~ 213 (444)
T 1igt_B 180 YTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDK 213 (444)
T ss_dssp EEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEE
T ss_pred EEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEE
Confidence 113469999999999 9999999 7766643333
No 190
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.63 E-value=1.5e-14 Score=109.08 Aligned_cols=150 Identities=10% Similarity=0.110 Sum_probs=93.9
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Ee--cc-eE---ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TT--NI-YT---YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~--~~-~~---~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ ..|.|+|.+.+ ..+ .. ++ .. ....+||.+..+...++++|.|.+++.+|+|.|+|++.
T Consensus 21 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 100 (475)
T 1iga_A 21 VSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARD 100 (475)
T ss_pred EEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEe
Confidence 689998763 78999996422 111 11 00 00 11257888876433467899999999999999999995
Q ss_pred CCC-------CeeEEEEEEEEcC---CCceE------eeCCCeEEEecCCC---Cc--eeEEEEeCCCeEEEec------
Q psy3125 68 TEP-------KMNMAIMLNVDDR---GRGAR------LSAGPLLNFAFPDL---LT--TNIYTYTGDARFSVIH------ 120 (163)
Q Consensus 68 ~~~-------~~~~~~~l~V~~~---~~~~~------v~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~------ 120 (163)
+.. .....+.|.|... .+.+. +..|..+.+.|... +. ..+.|++++.......
T Consensus 101 ~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~ 180 (475)
T 1iga_A 101 PYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQD 180 (475)
T ss_pred ccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceec
Confidence 532 1234557777642 11111 13577888999642 22 3788877654211110
Q ss_pred CCCC---ceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 121 PQNS---DEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 121 ~~~~---~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
...+ ....|.|.++..+|+|.|+|.| +..+
T Consensus 181 ~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 214 (475)
T 1iga_A 181 ASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTN 214 (475)
T ss_pred CCCCcEEEEEEEEechhHcCCCceEEEEEEECCC
Confidence 0111 1235899999999999999999 6544
No 191
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.62 E-value=2.1e-15 Score=105.61 Aligned_cols=148 Identities=14% Similarity=0.239 Sum_probs=81.0
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Ee----cceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TT----NIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~----~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+. .+ .. +...+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 99 (257)
T 3bn9_D 20 LSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARP 99 (257)
T ss_dssp EEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEE
T ss_pred EEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 689999864 889999965321 11 11 111111 247998886544568899999999999999999996
Q ss_pred CCCC--------------eeEEEEEEEEcC---CCce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEe
Q psy3125 68 TEPK--------------MNMAIMLNVDDR---GRGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVI 119 (163)
Q Consensus 68 ~~~~--------------~~~~~~l~V~~~---~~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~ 119 (163)
+... ....+.|.|... ++.+ .+..|..+.+.|... +.+ .+.|++++......
T Consensus 100 ~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~ 179 (257)
T 3bn9_D 100 YLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVH 179 (257)
T ss_dssp CCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEEEETTTTCCSSCE
T ss_pred cCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcE
Confidence 5321 123457787752 1111 123455677788532 333 78888776531100
Q ss_pred --c---CCCC---ceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 120 --H---PQNS---DEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 120 --~---~~~~---~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
. ...+ ....|.|.++..+| |.|+|.| +..
T Consensus 180 ~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~ 217 (257)
T 3bn9_D 180 TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 217 (257)
T ss_dssp ECCCEECTTSCEEEEEECCCC--------CEEEEEEEGG
T ss_pred ecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecC
Confidence 0 1111 23458999988888 9999999 543
No 192
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.62 E-value=2.7e-15 Score=109.82 Aligned_cols=149 Identities=16% Similarity=0.173 Sum_probs=98.9
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe-----
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM----- 72 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~----- 72 (163)
|.|.+. +.| +.+.|+|.+..... ..++|..+.. .+.+|.|.+++.+|+|.|+|.+.+ .+..
T Consensus 121 l~C~~~~~~p~~~i~W~~~~~~~~~-------~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 189 (382)
T 1cs6_A 121 FTCSPPPHYPALSYRWLLNEFPNFI-------PADGRRFVSQ----TTGNLYIAKTEASDLGNYSCFATSHIDFITKSVF 189 (382)
T ss_dssp ECCCCCSEESCCEEEEEESSTTCBC-------CCCSSEEECT----TTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEE
T ss_pred EEeCCCCCCCCcEEEEEECCCcccc-------ccCceEEEec----CceEEEEEeeCcccCeeEEEEEEEccccccceeE
Confidence 578754 456 89999984322111 1234443332 245699999999999999999943 2111
Q ss_pred eEEEEEEEEc-------------CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcC
Q psy3125 73 NMAIMLNVDD-------------RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKR 137 (163)
Q Consensus 73 ~~~~~l~V~~-------------~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 137 (163)
+..+.|.|.. .+....+..|..+.+.|.. .+.+.+.|++.+..+. .........|.|.+++.+
T Consensus 190 s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~--~~~~~~~~~L~i~~~~~~ 267 (382)
T 1cs6_A 190 SKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT--SKWLSSEPLLHIQNVDFE 267 (382)
T ss_dssp CCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCS--CCCSBSSSEEEECSCCGG
T ss_pred ccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccc--cEEecCCcEEEEccCChh
Confidence 2233444432 1234456678889999963 3456788988776532 112234557999999999
Q ss_pred CCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 138 DAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 138 D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|+|.|+|.| |..+..+..+.|.|..
T Consensus 268 d~G~Y~C~a~n~~g~~~~~~~l~V~~ 293 (382)
T 1cs6_A 268 DEGTYECEAENIKGRDTYQGRIIIHA 293 (382)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred hCEEEEEEEEcCCCeEEEEEEEEEec
Confidence 999999999 8888888888888763
No 193
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.62 E-value=3.8e-15 Score=104.97 Aligned_cols=117 Identities=17% Similarity=0.166 Sum_probs=78.4
Q ss_pred CeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEEEEEcCCC-------ceEeeCCCeEEEecCCC--Ccee-EEEEeCC
Q psy3125 45 DEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIMLNVDDRGR-------GARLSAGPLLNFAFPDL--LTTN-IYTYTGD 113 (163)
Q Consensus 45 ~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l~V~~~~~-------~~~v~~~~~~~~~~~~~--~~~~-~~~~~~~ 113 (163)
...+|.|.+++.+|+|.|+|.+. ..+..+..+.|.|..++. ...+..|..+.+.|... .... +.|+..+
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~ 128 (289)
T 3ejj_X 49 PGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREG 128 (289)
T ss_dssp SCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGG
T ss_pred CccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecC
Confidence 45789999999999999999984 444566777788876543 34566788899999743 2223 8898654
Q ss_pred CeEEEecCC--CCceEEEEecccCcCCCeeEEEEc--CCCCCccEEEEEEEe
Q psy3125 114 ARFSVIHPQ--NSDEWNMKIDYAQKRDAGIYECQV--NTEPKMNMAIMLNVD 161 (163)
Q Consensus 114 ~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a--~~~~~~~~~~~L~V~ 161 (163)
......... ......|.|.+++.+|+|.|+|.| +..+..+..+.|.|.
T Consensus 129 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 129 GRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp GEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEE
Confidence 433211000 011234999999999999999999 334566677788776
No 194
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.61 E-value=2.1e-16 Score=108.49 Aligned_cols=147 Identities=10% Similarity=0.108 Sum_probs=80.5
Q ss_pred CceEEecCC-CcEEEEEecCCe---eEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH---ILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|.+.+.+ +.|.|+|.+.+. .+....... ...+|+.+.. ..++.+|.|.+++.+|+|.|.|.+.+.. ..
T Consensus 43 L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~ 120 (233)
T 3bqu_C 43 IRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG--YGTDFVFTIENMLSEDVADYYCLQSDNLPYTF 120 (233)
T ss_dssp EEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE--EEEEEEEC-----CCCCSEEEEEECSSSSCCB
T ss_pred EEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec--cCCEEEEEECCCCHHHCEEEEEEEecCCceee
Confidence 689999988 889999864321 111111110 1134555442 2246689999999999999999995432 12
Q ss_pred eEEEEEEEEcC--CCceEee-------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe------cCC-CC----ceEE
Q psy3125 73 NMAIMLNVDDR--GRGARLS-------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI------HPQ-NS----DEWN 128 (163)
Q Consensus 73 ~~~~~l~V~~~--~~~~~v~-------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~------~~~-~~----~~~~ 128 (163)
...+.|.|... ++.+.+. .|..+.+.|... +. ..+.|++++..+... ... .. ....
T Consensus 121 ~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~ 200 (233)
T 3bqu_C 121 GGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSST 200 (233)
T ss_dssp CCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEE
T ss_pred cCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEE
Confidence 22334666543 2222221 367888999642 22 368999887643211 111 11 2346
Q ss_pred EEecccCcCCCeeEEEEc-CCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
|.|.++..+|+|.|+|.| |..
T Consensus 201 L~i~~~~~~d~g~Y~C~a~n~~ 222 (233)
T 3bqu_C 201 LTLTKDEYERHNSYTCEATHKT 222 (233)
T ss_dssp EEEEHHHHHTCCCEEEEEEEC-
T ss_pred EEECHHHhCCCCCEEEEEEeCC
Confidence 999999999999999999 554
No 195
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.61 E-value=2.4e-15 Score=110.21 Aligned_cols=153 Identities=16% Similarity=0.191 Sum_probs=99.0
Q ss_pred CceEEecCC----CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCC-eeEEEEeeCC--CCee
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDA-GIYECQVNTE--PKMN 73 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~-G~Y~C~~~~~--~~~~ 73 (163)
|.|.+.+.+ +.|.|+|.+ ..+.. ... ..++|+.+.. +.+|.|.+++.+|+ |.|+|.+.+. ....
T Consensus 123 l~C~~~~~~~~~~~~v~W~~~~-~~~~~-~~~--~~~~~~~~~~-----~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~ 193 (388)
T 2v5m_A 123 IKCLIPSFVADFVEVVSWHTDE-EENYF-PGA--EYDGKYLVLP-----SGELHIREVGPEDGYKSYQCRTKHRLTGETR 193 (388)
T ss_dssp ECCBCCTTTTTTEEEEEEEETT-CCEEC-SSS--CBTTTEEECT-----TSCEEESSCCGGGGGCCEEEEEEETTTCCEE
T ss_pred EEEECcCCCCCCcceEEEEeCC-Ccccc-ccc--CCCCcEEEcc-----CCcEEEecCCccccCeeEEEEeccCCCCcee
Confidence 579988764 679999832 22221 110 1245666553 34699999999999 9999999542 1111
Q ss_pred ---EEEEEEEEcC------------CCceEeeCCCeEEEecCCC--CceeEEEEeCCCeE---EEec---CCCCceEEEE
Q psy3125 74 ---MAIMLNVDDR------------GRGARLSAGPLLNFAFPDL--LTTNIYTYTGDARF---SVIH---PQNSDEWNMK 130 (163)
Q Consensus 74 ---~~~~l~V~~~------------~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~---~~~~~~~~L~ 130 (163)
....|.|..+ .....+..|..+.+.|... +.+.+.|++++... .... ........|.
T Consensus 194 ~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~ 273 (388)
T 2v5m_A 194 LSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLI 273 (388)
T ss_dssp ECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEE
T ss_pred eccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEE
Confidence 1124555543 1223566788899999743 45678898763211 0000 0001123699
Q ss_pred ecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 131 IDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
|.+++.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 274 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 306 (388)
T 2v5m_A 274 IKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA 306 (388)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred ECcCCHHHCeEEEEEEecCCCceeEEEEEEEeC
Confidence 9999999999999999 8889888888888864
No 196
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=102.70 Aligned_cols=142 Identities=13% Similarity=0.054 Sum_probs=92.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--CeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~~~~~~ 77 (163)
|.|.+. .| +.+.|++.++...+. ..+ .. ... +. ..+|+|.|+|.+.+.. ..+..+.
T Consensus 115 l~C~~~-~p~~~v~w~~~~~~~~~~---------~~~--~~----~~~-~~----~~~d~G~Y~C~a~n~~~~~~s~~~~ 173 (289)
T 3mjg_X 115 IPCRVT-DPQLVVTLHEKKGDVALP---------VPY--DH----QRG-FS----GIFEDRSYICKTTIGDREVDSDAYY 173 (289)
T ss_dssp ECCCBS-CTTSCEEEEESSCCSCCC---------CCE--ET----TTE-EE----ECCCSSEEEEEEEETTEEEECCCEE
T ss_pred EEeEcC-CCCceEEEEeCCCCCccc---------eee--cC----CcC-ee----eeccCcEEEEEEEeCCceeeeeeEE
Confidence 579998 55 999999854322211 011 00 111 11 3679999999995322 2233445
Q ss_pred EEEEc--CC------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeE-------EEecC--CCCceEEEEecccCcCC
Q psy3125 78 LNVDD--RG------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARF-------SVIHP--QNSDEWNMKIDYAQKRD 138 (163)
Q Consensus 78 l~V~~--~~------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~L~i~~v~~~D 138 (163)
|.|.. ++ ....+..|..+.+.|.. .+.+.+.|++++... ..... .......|.|.+++.+|
T Consensus 174 l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 253 (289)
T 3mjg_X 174 VYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELED 253 (289)
T ss_dssp EEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSC
T ss_pred EEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhh
Confidence 66654 21 22346678889999963 456788998654321 11111 12345789999999999
Q ss_pred CeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 139 AGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 139 ~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
+|.|+|.| |..|..+.++.|+|.++
T Consensus 254 ~G~Y~C~a~N~~G~~~~~~~l~v~~~ 279 (289)
T 3mjg_X 254 SGTYTCNVTESVNDHQDEKAINITVV 279 (289)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CcEEEEEeecCCCCceeEEEEEEEEE
Confidence 99999999 99999999999999763
No 197
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.61 E-value=1.8e-15 Score=111.21 Aligned_cols=149 Identities=19% Similarity=0.250 Sum_probs=100.2
Q ss_pred CceEE-ecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCC-CeeEEEEeeCC-CC---ee
Q psy3125 1 MACTV-MGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRD-AGIYECQVNTE-PK---MN 73 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D-~G~Y~C~~~~~-~~---~~ 73 (163)
|.|.+ .+.| +.+.|+|.+ ..++ ..+.++.... +.+|.|.+++.+| .|.|+|.+.+. +. ..
T Consensus 136 l~C~~~~~~p~~~v~W~~~~-~~~~-------~~~~~~~~~~-----~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~ 202 (404)
T 3p3y_A 136 LQCNPPPGLPSPVIFWMSSS-MEPI-------TQDKRVSQGH-----NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQK 202 (404)
T ss_dssp ECCCCCCCSSCCEEEEECTT-SCBC-------CCCSSEEECT-----TSCEEESSCCSGGGSSCBEEEEECTTTCCEEEC
T ss_pred EEeCCCCCCCCCeEEEeCCC-cccc-------CCCCcEEEcC-----CCcEEEEeeeeccCCcceEEEEEeccccceecc
Confidence 57998 6778 999999732 1111 2344555443 3469999999999 59999999542 22 12
Q ss_pred EEEEEEEEcC-------C---------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEec-CCCCceEEEEeccc
Q psy3125 74 MAIMLNVDDR-------G---------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIH-PQNSDEWNMKIDYA 134 (163)
Q Consensus 74 ~~~~l~V~~~-------~---------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~v 134 (163)
..+.|.|... + ....+..|..+.+.|.. .+.+.+.|++++..+.... ........|.|.++
T Consensus 203 ~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~ 282 (404)
T 3p3y_A 203 NPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV 282 (404)
T ss_dssp CCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSC
T ss_pred CceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccC
Confidence 3345566532 1 11346678889999963 3456889998876432110 00011346999999
Q ss_pred CcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 135 QKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 135 ~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
+.+|+|.|+|.| |..+..+..+.|.|..
T Consensus 283 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 311 (404)
T 3p3y_A 283 SEEDSGEYFCLASNKMGSIRHTISVRVKA 311 (404)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred CHhHCEEEEEEEEeCCCcEEEEEEEEEeC
Confidence 999999999999 8889888899998864
No 198
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.60 E-value=8.5e-15 Score=101.24 Aligned_cols=146 Identities=13% Similarity=0.149 Sum_probs=90.4
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEe-cceE-ecC---CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC--
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTT-NIYT-YTG---DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-- 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~-~~~~-~~~---~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-- 68 (163)
|.| ..+.+ +.|.|+|..... ++.. +... ... ++||.+... ..++++|.|.+++.+|+|.|.|.+..
T Consensus 22 L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~ 99 (245)
T 4ei6_B 22 LNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERP-DGSYFTLKIQPTALEDSAVYFCASSFWG 99 (245)
T ss_dssp EEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECC-TTSCEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEec-cCceEEEEECCCCHhHCEEEEEEEccCC
Confidence 679 55667 999999843221 1111 1111 112 278988863 34688999999999999999999963
Q ss_pred ---CCCeeEEEEEEEEcC-----CCceEee--------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe----cCC--
Q psy3125 69 ---EPKMNMAIMLNVDDR-----GRGARLS--------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI----HPQ-- 122 (163)
Q Consensus 69 ---~~~~~~~~~l~V~~~-----~~~~~v~--------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~----~~~-- 122 (163)
.......+.|.|... ++.+.+. .|..+.+.|... +. ..+.|+.++..+... ...
T Consensus 100 ~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~ 179 (245)
T 4ei6_B 100 AYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLK 179 (245)
T ss_dssp TTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEE
T ss_pred CcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCccccccccc
Confidence 123345556777741 2222222 256788888532 22 378898876543210 000
Q ss_pred -----CCc----eEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 123 -----NSD----EWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 123 -----~~~----~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
... ...|.|.....+| +|.|+|.| +.
T Consensus 180 ~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~ 216 (245)
T 4ei6_B 180 EQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (245)
T ss_dssp SSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred ccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEEC
Confidence 111 2348999998888 99999999 44
No 199
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.60 E-value=1.2e-14 Score=101.67 Aligned_cols=130 Identities=8% Similarity=0.064 Sum_probs=92.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CC-CCee---E
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TE-PKMN---M 74 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~-~~~~---~ 74 (163)
|.|.+. | +.|.| ++..+.. ......|.|..+..+|.|.|+|.+. +. +... .
T Consensus 118 l~C~~~--p~~~i~W---~g~~~~~------------------~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~ 174 (265)
T 2oz4_A 118 VKCEAH--PRAKVTL---NGVPAQP------------------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQ 174 (265)
T ss_dssp EEEECC--TTSEEEE---SSCSSSC------------------CSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEE
T ss_pred EEEEcc--CCCEEEE---CCEEccC------------------CCCcEEEEEccccccCCceEEEEEEcCCCCCcccccc
Confidence 578888 6 99999 3433210 1124458899999999999999994 33 3433 5
Q ss_pred EEEEEEEcCC--------CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEE
Q psy3125 75 AIMLNVDDRG--------RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 75 ~~~l~V~~~~--------~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.+.|.|..++ ....+..|..+.+.|.. .+.+.+.|++++.. ..... .+..++.+|+|.|+|
T Consensus 175 ~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~--~~~~g-------~~~~v~~~d~G~Y~C 245 (265)
T 2oz4_A 175 TRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTF--PLPIG-------ESVTVTRDLEGTYLC 245 (265)
T ss_dssp EEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTE--ECCTT-------SCEECCGGGCEEEEE
T ss_pred cEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcc--cCCCC-------cEEEeehhhCeEEEE
Confidence 6677777542 23467788899999974 35567899998882 22211 122488899999999
Q ss_pred Ec-CCCCCccEEEEEEEec
Q psy3125 145 QV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~ 162 (163)
.| |..|..+..+.|.|+.
T Consensus 246 ~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 246 RARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEECCCCcEEEEEEEEEec
Confidence 99 9999999999999975
No 200
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.60 E-value=9.2e-15 Score=111.29 Aligned_cols=150 Identities=11% Similarity=0.168 Sum_probs=91.1
Q ss_pred CceEEecCC-C--cEEEEEecCCeeEEecceE----ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe
Q psy3125 1 MACTVMGLG-R--PVSWMRKRDLHILTTNIYT----YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM 72 (163)
Q Consensus 1 l~C~~~~~~-~--~v~W~k~~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~ 72 (163)
|.|.+.+.+ + .|.|+| ++..+..+... ...++.|.+ ..+|.|.+++.+|+|.|+|.+.+ .+..
T Consensus 134 l~C~~~g~~p~~~~v~W~k--~g~~l~~~~~~~~~~~~~~~~~~~-------~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 204 (523)
T 2rcj_C 134 LVCLISDFYPGAVTVAWKA--DGSPVKAGVETTKPSKQSNNKYAA-------SSYLSLTPEQWKSHRSYSCQVTHEGSTV 204 (523)
T ss_pred EEEEeccccCCceEEEEec--CCCCCCCceEeccccccCCCCEEE-------EEEEEEechhcCCCceEEEEEEecCccc
Confidence 679999887 3 899998 33222211110 001222221 23699999999999999999954 3333
Q ss_pred eEEEEEEEE----cC------CCceEeeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEec-----CCC---CceEEEE
Q psy3125 73 NMAIMLNVD----DR------GRGARLSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVIH-----PQN---SDEWNMK 130 (163)
Q Consensus 73 ~~~~~l~V~----~~------~~~~~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~-----~~~---~~~~~L~ 130 (163)
...+.+.+. .+ .+...+..|..+.+.|... +.+ .+.|++++....... ... .....|.
T Consensus 205 ~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~ 284 (523)
T 2rcj_C 205 EKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVT 284 (523)
T ss_pred ccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEE
Confidence 333332211 11 1112345678899999742 334 688988876432111 011 1134799
Q ss_pred ecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 131 IDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
|.+++.+| |.|+|.| |..+..+..+.|.|
T Consensus 285 i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v 314 (523)
T 2rcj_C 285 VPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 314 (523)
T ss_pred echhhcCC-ceEEEEEEeCCCCcceEEecCC
Confidence 99999999 9999999 88887766666644
No 201
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=107.73 Aligned_cols=143 Identities=17% Similarity=0.191 Sum_probs=92.3
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~ 79 (163)
|.|.+.+. |.|++.. ..++.+.. .....+|.|.+++.+|+|.|+|.+.+ .+..+..+.|.
T Consensus 24 L~C~~~~~---v~W~~~~--------------~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~ 84 (292)
T 4dkd_C 24 LRCVGNGS---VEWDGPP--------------SPHWTLYS--DGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLY 84 (292)
T ss_dssp EEEECSSC---CCBCCCC--------------CSSCEECC--BTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCE
T ss_pred EEEcCCCc---eEEccCC--------------CCceEEec--cCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEE
Confidence 46777764 8888521 12222222 23467899999999999999999944 34456777788
Q ss_pred EEcCCC-------ceEeeCCCeEEEecCCC-Cc--eeEEEEeCCCeEEEecC--CCCceEEEEecccCcCCCeeEEEEc-
Q psy3125 80 VDDRGR-------GARLSAGPLLNFAFPDL-LT--TNIYTYTGDARFSVIHP--QNSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 80 V~~~~~-------~~~v~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
|..++. ...+..|..+.+.|... +. ..+.|++.+........ .......|.|.+++.+|+|.|+|.|
T Consensus 85 V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 164 (292)
T 4dkd_C 85 VKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSAL 164 (292)
T ss_dssp ECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEEC
T ss_pred EcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEE
Confidence 776543 23566788899999643 22 56889876432211100 0011223999999999999999999
Q ss_pred CCCCCc-cEEEEEEEec
Q psy3125 147 NTEPKM-NMAIMLNVDG 162 (163)
Q Consensus 147 ~~~~~~-~~~~~L~V~~ 162 (163)
+..+.. +..+.|.|..
T Consensus 165 n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 165 MGGRKVMSISIRLKVQK 181 (292)
T ss_dssp STTSCEECCCEEEEEEC
T ss_pred eCCCceeEEEEEEEEeC
Confidence 665543 4477887764
No 202
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.60 E-value=7.3e-15 Score=107.78 Aligned_cols=154 Identities=13% Similarity=0.175 Sum_probs=97.8
Q ss_pred CceEE-ecCC-CcEEEEEecC-CeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCe---eEEEEeeC-CCCee
Q psy3125 1 MACTV-MGLG-RPVSWMRKRD-LHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAG---IYECQVNT-EPKMN 73 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G---~Y~C~~~~-~~~~~ 73 (163)
|.|.+ .+.| +.|.|+|.+. ..+.. .....+.|+.+.. +.+|.|.+++.+|+| .|+|.+.+ .+...
T Consensus 120 l~C~~~~~~p~~~v~W~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~ 191 (395)
T 1bih_A 120 LDCVLPNAYPKPLITWKKRLSGADPNA---DVTDFDRRITAGP-----DGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEE 191 (395)
T ss_dssp ECCCCCEEESCCEEEEEEEETTSCGGG---CCCCCCTTEEECT-----TSCEEEEEECGGGCCSSEEEEEEEECTTCSSC
T ss_pred EEecCCCCCCCCeEEEEecCCCcCccc---ccccccccEEEcC-----CCcEEEEEEeeccCCCceEEEEEEEecccceE
Confidence 57996 7788 9999998531 11110 0001145665543 336999999999999 99999954 33322
Q ss_pred EEEE---EEEEcC--------------CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEec------CCCCceEE
Q psy3125 74 MAIM---LNVDDR--------------GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIH------PQNSDEWN 128 (163)
Q Consensus 74 ~~~~---l~V~~~--------------~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 128 (163)
.... +.+... +....+..|..+.+.|.. .+.+.+.|++++..+.... ........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (395)
T 1bih_A 192 VVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKR 271 (395)
T ss_dssp EEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSE
T ss_pred EEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCce
Confidence 2211 111111 234567778889999963 4456789998875432111 11112236
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCccE-EEEEEEec
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMNM-AIMLNVDG 162 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~~-~~~L~V~~ 162 (163)
|.|.+++.+|+|.|+|.| |..+.... .+.|.|..
T Consensus 272 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~ 307 (395)
T 1bih_A 272 LLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS 307 (395)
T ss_dssp EEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE
T ss_pred EEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc
Confidence 999999999999999999 77777554 88888863
No 203
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.60 E-value=4.2e-14 Score=99.88 Aligned_cols=133 Identities=14% Similarity=0.101 Sum_probs=90.8
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+ .|.|+|.+.. + +.. .. ...+|.|.+++.+|+|.|+|.+.+ +. +..+.|.|
T Consensus 32 l~C~~~~---~i~W~~~~~~-~------------~~~-~~----~~~~L~i~~~~~~d~G~Y~C~~~n-g~-~~~~~l~V 88 (290)
T 2o26_X 32 LTCIDPD---FVRWTFKTYF-N------------EMV-EN----KKNEWIQEKAEATRTGTYTCSNSN-GL-TSSIYVFV 88 (290)
T ss_dssp EEEECTT---EEEEEEECSS-S------------CEE-EE----CSSEEEETTCCGGGCEEEEEEESS-SC-EEEEEEEE
T ss_pred EEECCCC---cEEEecCCcc-e------------eee-cC----CCceEEEeccCHHhCeEEEEEeeC-Cc-cEEEEEEE
Confidence 5687777 8999984322 1 111 11 126799999999999999999966 33 77778888
Q ss_pred EcCC------CceEeeCCCeEEEecCCC-Cc-eeEEEEeCCC-------eEEEecCCCCceEEEEecccCcCCCe-eEEE
Q psy3125 81 DDRG------RGARLSAGPLLNFAFPDL-LT-TNIYTYTGDA-------RFSVIHPQNSDEWNMKIDYAQKRDAG-IYEC 144 (163)
Q Consensus 81 ~~~~------~~~~v~~~~~~~~~~~~~-~~-~~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~v~~~D~G-~Y~C 144 (163)
..++ ....+..|..+.+.|... +. ..+.|+..++ ++.... ...|.|.+++.+|+| .|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~-----~~~L~i~~v~~~d~G~~Y~C 163 (290)
T 2o26_X 89 RDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNP-----KAGITIKNVKRAYHRLCVRC 163 (290)
T ss_dssp ECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEET-----TTEEEEESCCGGGTTCEEEE
T ss_pred eCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCC-----CCCEEEecccHHHCCCEEEE
Confidence 7643 334566788899999743 44 6788865433 222221 125999999999999 9999
Q ss_pred Ec-CCCCC-ccEEEEEEEe
Q psy3125 145 QV-NTEPK-MNMAIMLNVD 161 (163)
Q Consensus 145 ~a-~~~~~-~~~~~~L~V~ 161 (163)
.| |..+. .+..+.|.|.
T Consensus 164 ~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 164 AAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp EEEETTEEEECCCEEEEEE
T ss_pred EEEECCceEEeEEEEEEEE
Confidence 99 65433 2345777775
No 204
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.59 E-value=7.4e-15 Score=102.26 Aligned_cols=158 Identities=11% Similarity=0.193 Sum_probs=92.6
Q ss_pred CceEEecC--C-CcEEEEEecCCe---eE-Ee---cce-Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLH---IL-TT---NIY-TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~---~~-~~---~~~-~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. + ..|.|+|+.... .+ .. +.. .. ...+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 19 L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 98 (248)
T 3u2s_H 19 LSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVRE 98 (248)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 68999863 3 889999864322 11 11 111 11 1247998876544568999999999999999999995
Q ss_pred CC-----------------------CCeeEEEEEEEEcC-CCce---------EeeCCCeEEEecCCC---C-ceeEEEE
Q psy3125 68 TE-----------------------PKMNMAIMLNVDDR-GRGA---------RLSAGPLLNFAFPDL---L-TTNIYTY 110 (163)
Q Consensus 68 ~~-----------------------~~~~~~~~l~V~~~-~~~~---------~v~~~~~~~~~~~~~---~-~~~~~~~ 110 (163)
+. ......+.|.|... +..+ .+..|..+.+.|... + ...+.|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~ 178 (248)
T 3u2s_H 99 AGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 178 (248)
T ss_dssp EEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEEEEEEBSSCCEEEEG
T ss_pred CCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEe
Confidence 42 11223456666622 1111 122356677888532 2 3457787
Q ss_pred eCCCeE--EE----ecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEE
Q psy3125 111 TGDARF--SV----IHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLN 159 (163)
Q Consensus 111 ~~~~~~--~~----~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~ 159 (163)
.++... .. ..... ...+.|.|.+...+| |.|+|.| +..+.......|.
T Consensus 179 ~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 235 (248)
T 3u2s_H 179 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 235 (248)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred ECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEc
Confidence 765421 10 11111 113468899998889 9999999 6655544444443
No 205
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.59 E-value=1.3e-14 Score=101.34 Aligned_cols=158 Identities=11% Similarity=0.238 Sum_probs=94.1
Q ss_pred CceEEecCC---CcEEEEEecCCe---eE-Eecc---e-Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH---IL-TTNI---Y-TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~---~~-~~~~---~-~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.. ..|.|+|..... .+ .... . .. ...+|+.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 43 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 122 (256)
T 3sob_H 43 LSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARG 122 (256)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEe
Confidence 689998643 789999864321 11 1111 1 11 1247998876544578999999999999999999996
Q ss_pred CCC------------CeeEEEEEEEEcCC---Cce-------EeeCCCeEEEecCCC---C-ceeEEEEeCCCeE----E
Q psy3125 68 TEP------------KMNMAIMLNVDDRG---RGA-------RLSAGPLLNFAFPDL---L-TTNIYTYTGDARF----S 117 (163)
Q Consensus 68 ~~~------------~~~~~~~l~V~~~~---~~~-------~v~~~~~~~~~~~~~---~-~~~~~~~~~~~~~----~ 117 (163)
+.. .....+.|.|.... +.+ .+..|..+.+.|... + ...+.| ++... .
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~ 200 (256)
T 3sob_H 123 SGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVH 200 (256)
T ss_dssp SSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEE
T ss_pred cCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeE
Confidence 432 12344567775321 111 123567788888532 2 345667 32211 1
Q ss_pred E----ecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 118 V----IHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 118 ~----~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
. ..... ...+.|.|.+...+| |.|+|.| +..+.......|.|.
T Consensus 201 ~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 201 TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp ECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred eCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 0 11111 123469999999999 9999999 666555555555543
No 206
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.59 E-value=2.8e-15 Score=111.79 Aligned_cols=157 Identities=12% Similarity=0.235 Sum_probs=97.0
Q ss_pred CceEEecCC---CcEEEEEecCC-ee--E-Eecc---e---EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL-HI--L-TTNI---Y---TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~-~~--~-~~~~---~---~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+.+ .+ + .... . .....+|+.+..+...+.++|.|.+++.+|+|.|+|++.
T Consensus 19 L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 98 (434)
T 1igy_B 19 MSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVRE 98 (434)
T ss_dssp ECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCS
T ss_pred EEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChHHCEEEEEEEE
Confidence 689999863 88999986422 11 1 1100 0 011246888765322356789999999999999999995
Q ss_pred CC-CCeeEEEEEEEEcC---CCce-------EeeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEe-----cCCC--Cc
Q psy3125 68 TE-PKMNMAIMLNVDDR---GRGA-------RLSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVI-----HPQN--SD 125 (163)
Q Consensus 68 ~~-~~~~~~~~l~V~~~---~~~~-------~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~-----~~~~--~~ 125 (163)
+. ......+.|.|... ++.. .+..|..+.+.|... +.+ .+.|++++...... .... ..
T Consensus 99 ~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 178 (434)
T 1igy_B 99 GEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 178 (434)
T ss_dssp SSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEE
T ss_pred ccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEE
Confidence 42 23344556777531 1111 224678889999642 333 78888776531110 0011 11
Q ss_pred eEEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 126 EWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 126 ~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
...|.|.+++.+| |.|+|.| |..+.......+
T Consensus 179 ~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~ 211 (434)
T 1igy_B 179 SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKI 211 (434)
T ss_dssp EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEEC
T ss_pred EEEEEEcchhcCC-CcEEEEEEeCCCCccceeec
Confidence 3469999999999 9999999 777765444433
No 207
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.59 E-value=8.8e-15 Score=102.71 Aligned_cols=147 Identities=12% Similarity=0.161 Sum_probs=90.0
Q ss_pred CceEEecCCCcEEEEEecCCe----eEEecc-eEecC----CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC--
Q psy3125 1 MACTVMGLGRPVSWMRKRDLH----ILTTNI-YTYTG----DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-- 69 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~----~~~~~~-~~~~~----~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-- 69 (163)
|.|.+.+..+.|.|+|.+... ++.... ..... ++||.+... ..++++|.|.+++.+|+|.|.|.+.+.
T Consensus 47 L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~ 125 (270)
T 3qib_D 47 MRCIPEKGHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECP-SNSPCSLEIQSSEAGDSALYLCASSLNWS 125 (270)
T ss_dssp EEEECCTTCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECC-TTSCEEEEESSCCGGGCEEEEEEEESCTT
T ss_pred EEEEecCCCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeC-CCcEEEEEECCCCHhHCeEEEEEEecCCC
Confidence 679987633999999854321 111111 11111 128888752 356889999999999999999999642
Q ss_pred ---CCeeEEEEEEEEcC-----CCceEee--------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe--cC------
Q psy3125 70 ---PKMNMAIMLNVDDR-----GRGARLS--------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI--HP------ 121 (163)
Q Consensus 70 ---~~~~~~~~l~V~~~-----~~~~~v~--------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~--~~------ 121 (163)
......+.|.|... ++.+.+. .|..+.+.|... +. ..+.|++++..+... ..
T Consensus 126 ~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~ 205 (270)
T 3qib_D 126 QDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKE 205 (270)
T ss_dssp CCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEES
T ss_pred ccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccc
Confidence 12334556777762 1222221 267788888632 22 367898876544210 00
Q ss_pred ----CCC---ceEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 122 ----QNS---DEWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 122 ----~~~---~~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
... ....|.|.+...+| +|.|+|.| +.
T Consensus 206 ~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~ 241 (270)
T 3qib_D 206 QPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 241 (270)
T ss_dssp CTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEEC
T ss_pred cccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEec
Confidence 011 12458888888888 99999999 44
No 208
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.59 E-value=2.1e-14 Score=97.62 Aligned_cols=152 Identities=16% Similarity=0.207 Sum_probs=89.7
Q ss_pred CceEEecCC---CcEEEEEecCC---ee-EEec---ceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HI-LTTN---IYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~-~~~~---~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.+.+ .. +... .... ...+|+.+..+...++++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 99 (215)
T 1c5d_H 20 LTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTRED 99 (215)
T ss_dssp EEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECC
T ss_pred EEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccCEEEEEEEec
Confidence 689999864 88999986422 11 2111 0111 12478988764444678999999999999999999955
Q ss_pred CC----CeeEEEEEEEEcC---CCceE-------eeCCCeEEEecCCC---Cce-eEEEEeCCCeEEEecCC---CCceE
Q psy3125 69 EP----KMNMAIMLNVDDR---GRGAR-------LSAGPLLNFAFPDL---LTT-NIYTYTGDARFSVIHPQ---NSDEW 127 (163)
Q Consensus 69 ~~----~~~~~~~l~V~~~---~~~~~-------v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~---~~~~~ 127 (163)
.. .....+.|.|... ++.+. +..|..+.+.|... +.+ .+.|++++......... .....
T Consensus 100 ~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~ 179 (215)
T 1c5d_H 100 GWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLY 179 (215)
T ss_dssp SSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBCCCEEETTEE
T ss_pred CCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEecCcccCCCCE
Confidence 32 2334467888742 11121 23567788888642 334 78888776532111000 01121
Q ss_pred EE--EecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 128 NM--KIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 128 ~L--~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.+ .|.....+| |.|+|.| +..+...
T Consensus 180 ~~~s~L~~~~~~~-g~ytC~v~n~~~~~~ 207 (215)
T 1c5d_H 180 TLTSSVTSSTWPS-QTVTCNVAHPASSTK 207 (215)
T ss_dssp EEEEEEEESSTTT-SCCEEEEEEGGGTEE
T ss_pred EEEEEEecccCCC-CeEEEEEEeCCCCcc
Confidence 11 233444456 9999999 6655543
No 209
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.58 E-value=1.9e-14 Score=100.87 Aligned_cols=147 Identities=12% Similarity=0.193 Sum_probs=91.2
Q ss_pred CceEEecCCCcEEEEEecCCe----eEEe-cceEecC----CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC---
Q psy3125 1 MACTVMGLGRPVSWMRKRDLH----ILTT-NIYTYTG----DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT--- 68 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~----~~~~-~~~~~~~----~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~--- 68 (163)
|.|.+....+.|.|+|...+. +... +...... ++|+.+... ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 46 L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~ 124 (268)
T 3pl6_D 46 LRCDPISGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRP-EGSVSTLKIQRTERGDSAVYLCATSALGD 124 (268)
T ss_dssp EEEBCBTTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECT-TSSSEEEEECSCCGGGCEEEEEEEESSSS
T ss_pred EEEEeCCCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEec-CCCEEEEEECCCCcccCEEEEEEEecCCC
Confidence 579887433999999953221 1111 1111111 278888863 35689999999999999999999964
Q ss_pred CCCeeEEEEEEEEcC-----CCceEe--------eCCCeEEEecCCC---C-ceeEEEEeCCCeEEEe--cC--------
Q psy3125 69 EPKMNMAIMLNVDDR-----GRGARL--------SAGPLLNFAFPDL---L-TTNIYTYTGDARFSVI--HP-------- 121 (163)
Q Consensus 69 ~~~~~~~~~l~V~~~-----~~~~~v--------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~--~~-------- 121 (163)
.......+.|.|... ++...+ ..|..+.+.|... + ...+.|++++..+... ..
T Consensus 125 ~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~ 204 (268)
T 3pl6_D 125 TQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQP 204 (268)
T ss_dssp SCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESST
T ss_pred ceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccc
Confidence 223344556777752 112222 1357788889632 2 2378899877644210 00
Q ss_pred --CCC---ceEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 122 --QNS---DEWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 122 --~~~---~~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
... ....|.|.....+| +|.|+|.| +.
T Consensus 205 ~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~ 238 (268)
T 3pl6_D 205 ALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFY 238 (268)
T ss_dssp TCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred cCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcC
Confidence 011 12457888888887 99999999 44
No 210
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.58 E-value=2.7e-14 Score=100.83 Aligned_cols=148 Identities=11% Similarity=0.178 Sum_probs=92.2
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEE-ecc---eE-e--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILT-TNI---YT-Y--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~-~~~---~~-~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.+.. ..+. ... .. . ...+|+.+..+ ..++++|.|.+++.+|+|.|.|++.+.
T Consensus 44 L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 44 IECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA-SLTLSTLTVTSAHPEDSSFYICSARDL 122 (279)
T ss_dssp EEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEEC-SSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeC-CCCEEEEEEccCCccCCEEEEEEEccc
Confidence 689998888 99999996422 1111 111 01 1 12478988763 246889999999999999999999541
Q ss_pred -----C--CeeEEEEEEEEcC-----CCceEee--------CCCeEEEecCCC---C-ceeEEEEeCCCeEE----Ee--
Q psy3125 70 -----P--KMNMAIMLNVDDR-----GRGARLS--------AGPLLNFAFPDL---L-TTNIYTYTGDARFS----VI-- 119 (163)
Q Consensus 70 -----~--~~~~~~~l~V~~~-----~~~~~v~--------~~~~~~~~~~~~---~-~~~~~~~~~~~~~~----~~-- 119 (163)
. .....+.|.|... ++.+.+. .|..+.+.|... + .+.+.|++++..+. ..
T Consensus 123 ~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 202 (279)
T 2wbj_D 123 TSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQ 202 (279)
T ss_dssp TCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSS
T ss_pred ccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccc
Confidence 1 1233456888752 2223322 356788888642 2 25788998765331 10
Q ss_pred -----cCCCCc----eEEEEecccCcCC-CeeEEEEc-CCC
Q psy3125 120 -----HPQNSD----EWNMKIDYAQKRD-AGIYECQV-NTE 149 (163)
Q Consensus 120 -----~~~~~~----~~~L~i~~v~~~D-~G~Y~C~a-~~~ 149 (163)
...... ...|.|.+....| .|.|+|.| +..
T Consensus 203 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~ 243 (279)
T 2wbj_D 203 PLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYG 243 (279)
T ss_dssp CEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECC
T ss_pred cccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCC
Confidence 000111 2358898888765 77899999 553
No 211
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.58 E-value=6.8e-14 Score=97.79 Aligned_cols=139 Identities=10% Similarity=0.095 Sum_probs=92.7
Q ss_pred CceEEec-CC-C--cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEccc---CcCCCee--EEEEee-CCC
Q psy3125 1 MACTVMG-LG-R--PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYA---QKRDAGI--YECQVN-TEP 70 (163)
Q Consensus 1 l~C~~~~-~~-~--~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v---~~~D~G~--Y~C~~~-~~~ 70 (163)
|.|.+.+ .| + .|.|+| ++..+. .+ +.. . ...|.|..+ +.+|+|. |+|.+. ..+
T Consensus 23 l~C~~~g~~p~p~~~v~W~k--~~~~l~---------~~--~~~--~--~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~ 85 (265)
T 2oz4_A 23 VVCSLDGLFPVSEAQVHLAL--GDQRLN---------PT--VTY--G--NDSFSAKASVSVTAEDEGTQRLTCAVILGNQ 85 (265)
T ss_dssp EEEEEESCSCGGGCEEEEEE--TTEECC---------CE--EEE--C--SSEEEEEEEEEECGGGCEEEEEEEEEEETTE
T ss_pred EEEEccCCCCCcceEEEEEe--CCEECC---------ce--Eee--C--CCeEEEEeecccccccCCcceEEEEEecCCC
Confidence 6899999 67 5 999998 332221 11 111 1 113444444 7788885 999994 445
Q ss_pred CeeEEEEEEEEcCCC------ceEeeCCCeEEEecCCCCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEE
Q psy3125 71 KMNMAIMLNVDDRGR------GARLSAGPLLNFAFPDLLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 71 ~~~~~~~l~V~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.....+.|.|...+. ...+..|..+.+.|...+...+.| ++..+ ........|.|..+..+|+|.|+|
T Consensus 86 ~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~p~~~i~W--~g~~~----~~~~~~~~l~i~~~~~~~~g~Y~C 159 (265)
T 2oz4_A 86 SQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTL--NGVPA----QPLGPRAQLLLKATPEDNGRSFSC 159 (265)
T ss_dssp EEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECCTTSEEEE--SSCSS----SCCSSEECCEEECCGGGTTEEEEE
T ss_pred CcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEccCCCEEEE--CCEEc----cCCCCcEEEEEccccccCCceEEE
Confidence 666778888876432 234567888999998766678888 44433 122345669999999999999999
Q ss_pred Ec-CCC-CCcc---EEEEEEEec
Q psy3125 145 QV-NTE-PKMN---MAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~-~~~~---~~~~L~V~~ 162 (163)
.| +.. |... ..+.|.|..
T Consensus 160 ~a~n~~~g~~~~~s~~~~l~V~~ 182 (265)
T 2oz4_A 160 SATLEVAGQLIHKNQTRELRVLY 182 (265)
T ss_dssp EEEEECSSSEEEEEEEEEEEEEE
T ss_pred EEEcCCCCCcccccccEEEEEEe
Confidence 99 554 5554 677777753
No 212
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=7.1e-14 Score=96.11 Aligned_cols=148 Identities=10% Similarity=0.058 Sum_probs=91.9
Q ss_pred CceEEecC--C-CcEEEEEecCC---e-eEEecce--Ee---cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---H-ILTTNIY--TY---TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~-~~~~~~~--~~---~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + ..|.|+|.+.+ . ++..... .+ ...+||.+..+...++++|.|.+++.+|+|.|.|++.+
T Consensus 21 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 100 (230)
T 1ypz_F 21 ISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGE 100 (230)
T ss_dssp EEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECC
T ss_pred EEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEEC
Confidence 68999885 5 89999986432 1 2222111 01 14689998865444789999999999999999999965
Q ss_pred C---C--CeeEEEEEEEEc--------CCCceEee--------CCCeEEEecCCC---C-ceeEEEEe-CCCeEEE--e-
Q psy3125 69 E---P--KMNMAIMLNVDD--------RGRGARLS--------AGPLLNFAFPDL---L-TTNIYTYT-GDARFSV--I- 119 (163)
Q Consensus 69 ~---~--~~~~~~~l~V~~--------~~~~~~v~--------~~~~~~~~~~~~---~-~~~~~~~~-~~~~~~~--~- 119 (163)
. . .....+.|.|.. .++.+.+. .|..+.+.|... + ...+.|++ ++..+.. .
T Consensus 101 ~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~ 180 (230)
T 1ypz_F 101 GSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEG 180 (230)
T ss_dssp TTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEEC
T ss_pred CCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEEEccCCeEccccccc
Confidence 2 1 123456788872 11223332 245678888532 3 25788988 4432210 0
Q ss_pred ---cCCC--CceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 120 ---HPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 120 ---~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
.... .....|.|.++.. | |.|+|.| +...
T Consensus 181 ~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~ 215 (230)
T 1ypz_F 181 DTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENN 215 (230)
T ss_dssp CCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSC
T ss_pred eeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCC
Confidence 0000 1134699988876 5 9999999 6544
No 213
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.57 E-value=3.8e-14 Score=97.71 Aligned_cols=147 Identities=12% Similarity=0.126 Sum_probs=90.1
Q ss_pred CceEEecCCCcEEEEEecCCe----eEEec-ceEe---cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee--CC-
Q psy3125 1 MACTVMGLGRPVSWMRKRDLH----ILTTN-IYTY---TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN--TE- 69 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~----~~~~~-~~~~---~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~--~~- 69 (163)
|.|.+.+..+.|.|+|..... +.... .... ...+|+.+... ..++++|.|.+++.+|+|.|.|.+. ..
T Consensus 22 L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~ 100 (240)
T 3q5y_A 22 LTCIPISGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQF-DDYHSEMNMSALELEDSAMYFCASSLRWGD 100 (240)
T ss_dssp EEEECCTTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEEC-TTSCEEEEECSCCGGGCEEEEEEEESSTTB
T ss_pred EEEEeCCCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeC-CCCEEEEEECcCChhHCEEEEEEEccCCCc
Confidence 689988733999999853221 11111 1111 12368888763 3568899999999999999999995 21
Q ss_pred -CCeeEEEEEEEEc-----CCCceEe--------eCCCeEEEecCCC---C-ceeEEEEeCCCeEEEe---------cCC
Q psy3125 70 -PKMNMAIMLNVDD-----RGRGARL--------SAGPLLNFAFPDL---L-TTNIYTYTGDARFSVI---------HPQ 122 (163)
Q Consensus 70 -~~~~~~~~l~V~~-----~~~~~~v--------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~---------~~~ 122 (163)
......+.|.|.. .++...+ ..|..+.+.|... + ...+.|++++..+... ...
T Consensus 101 ~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~ 180 (240)
T 3q5y_A 101 EQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESN 180 (240)
T ss_dssp CCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEET
T ss_pred ceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCC
Confidence 2233455677764 1222222 1256788888632 2 2367798876543210 000
Q ss_pred C--CceEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 123 N--SDEWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 123 ~--~~~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
. .....|.|.++..+| +|.|+|.| +.
T Consensus 181 g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~ 210 (240)
T 3q5y_A 181 YSYSLSSRLRVSATFWHNPRNHFRCQVQFH 210 (240)
T ss_dssp TEEEEEEEEEEEHHHHSCTTCEEEEEEEEC
T ss_pred CCEEEEEEEEECHHHhccCCCEEEEEEEcC
Confidence 0 112349999999999 77999999 54
No 214
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=7e-15 Score=89.72 Aligned_cols=72 Identities=24% Similarity=0.392 Sum_probs=56.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.|.| +.|.|+| ++.. +..+.|+.+..+ ....+|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 33 l~C~~~G~P~p~v~W~k--~g~~-------l~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 101 (107)
T 3knb_B 33 LKCVVLGEPPPVVVWEK--GGQQ-------LAASERLSFPAD--GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCCCSSEECCEE--TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEecCCEEEEEE--Cccc-------ccceeeEEEeec--CceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEE
Confidence 689999999 9999998 3332 334567776652 45778999999999999999999 556677778888
Q ss_pred EEEcC
Q psy3125 79 NVDDR 83 (163)
Q Consensus 79 ~V~~~ 83 (163)
.|.++
T Consensus 102 ~V~~p 106 (107)
T 3knb_B 102 TVLEP 106 (107)
T ss_dssp EEEC-
T ss_pred EEEcC
Confidence 88765
No 215
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.56 E-value=5.1e-14 Score=105.20 Aligned_cols=142 Identities=11% Similarity=0.090 Sum_probs=85.3
Q ss_pred CceEEecC-C---CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCe--eEEEEeeC-CCCee
Q psy3125 1 MACTVMGL-G---RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAG--IYECQVNT-EPKMN 73 (163)
Q Consensus 1 l~C~~~~~-~---~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G--~Y~C~~~~-~~~~~ 73 (163)
|.|.+.+. | +.+.|+| ++..+. .++.... +.....+.+ +++.+|+| .|+|.+.+ .+...
T Consensus 208 l~C~~~g~~P~~~~~~~W~~--~~~~~~---------~~~~~~~--~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~ 273 (450)
T 1z7z_I 208 VVCSLDGLFPVSEAQVHLAL--GDQRLN---------PTVTYGN--DSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQE 273 (450)
T ss_dssp EEEEEESCTTGGGCEEEEEE--TTEECC---------CEEEEET--TEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEE
T ss_pred EEEEeeCCCCCCceEEEEeC--CCEeCC---------ceEEecC--CceeEEEEE-EeEhhhCCcEEEEEEEccCCccEE
Confidence 57999988 5 7899998 322221 1222221 111112233 88999999 99999944 45566
Q ss_pred EEEEEEEEcCCC------ceEeeCCCeEEEecCCCCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-
Q psy3125 74 MAIMLNVDDRGR------GARLSAGPLLNFAFPDLLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 74 ~~~~l~V~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
..+.|.|...+. ...+..|..+.+.|...+.+.+.| ++..+.. ......|.|.+++.+|+|.|+|.|
T Consensus 274 ~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l~C~~~p~p~i~W--~g~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~ 347 (450)
T 1z7z_I 274 TLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTL--NGVPAQP----LGPRAQLLLKATPEDNGRSFSCSAT 347 (450)
T ss_dssp EEEEEEEECCCCCEEEESCSEEETTCEEEEEEEC----------------------CCCCCEEEECCGGGTTCEEEEEEE
T ss_pred EEEEEEEecCCCCeEecCCeeEeCCCcEEEEEecCCCCEeEE--CCEEcCC----CCceEEEEEecCcccCCceEEEEEE
Confidence 677888886422 224667889999998776677788 4443311 122346999999999999999999
Q ss_pred CCCC----CccEEEEEEEec
Q psy3125 147 NTEP----KMNMAIMLNVDG 162 (163)
Q Consensus 147 ~~~~----~~~~~~~L~V~~ 162 (163)
|..+ ..+..+.|.|..
T Consensus 348 n~~~g~~~~~~~~~~l~V~~ 367 (450)
T 1z7z_I 348 LEVAGQLIHKNQTRELRVLY 367 (450)
T ss_dssp EEETTEEEEEEEEEECEEEE
T ss_pred cCCCCcccccceeEEEEEec
Confidence 6554 334677777753
No 216
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=1.4e-13 Score=93.33 Aligned_cols=146 Identities=17% Similarity=0.190 Sum_probs=86.8
Q ss_pred CceEEecCCCcEEEEEecCC---eeEEecceEecCCCeEEEecc-CCCCeEEEEEcccCcCCCeeEEEEeeCCC------
Q psy3125 1 MACTVMGLGRPVSWMRKRDL---HILTTNIYTYTGDARFSVIHP-QNSDEWNMKIDYAQKRDAGIYECQVNTEP------ 70 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~---~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~------ 70 (163)
|.|.+.+....|.|+|.+.+ ..+..........+||.+..+ ...+.++|.|.+++.+|+|.|.|.+.+..
T Consensus 21 L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~p~~ 100 (207)
T 1ypz_E 21 LRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYE 100 (207)
T ss_dssp EEEEESSCCSEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBCCCTTCC
T ss_pred EEEEEeCCCeEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCCcccccc
Confidence 68999876567999996532 222212111223579988864 33568899999999999999999995431
Q ss_pred ------CeeEEEEEEEEcC-----CCceEeeCCCeEEEecCCC---C-ceeEEEEeCCCeEEEecC----CCCceEEEEe
Q psy3125 71 ------KMNMAIMLNVDDR-----GRGARLSAGPLLNFAFPDL---L-TTNIYTYTGDARFSVIHP----QNSDEWNMKI 131 (163)
Q Consensus 71 ------~~~~~~~l~V~~~-----~~~~~v~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~----~~~~~~~L~i 131 (163)
.....+.|.|... ++.+.+..+ .+.+.|... + .+.+.|+.+ ..+..... ..... +.+
T Consensus 101 ~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~--y~~ 176 (207)
T 1ypz_E 101 LGTDKLVFGQGTQVTVEPKSQPPAKPSVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPSGK--YSA 176 (207)
T ss_dssp CCCCCCEECCCEEEEEECCCCCCCCCEEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECTTSS--EEE
T ss_pred cccceeeecCccEEEEccCCCCCCCCeEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcCCCc--EEE
Confidence 1223467888752 222222222 256667431 2 257888887 54331110 11122 333
Q ss_pred ccc-CcCCCeeEEEEc-CCCC
Q psy3125 132 DYA-QKRDAGIYECQV-NTEP 150 (163)
Q Consensus 132 ~~v-~~~D~G~Y~C~a-~~~~ 150 (163)
... ..+|.|.|+|.| +..+
T Consensus 177 ~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 177 VKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp EECEEESSTTTCEEEEEETTE
T ss_pred EEeecccCCCcEEEEEEECCc
Confidence 333 347889999999 5543
No 217
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.54 E-value=3.7e-14 Score=105.98 Aligned_cols=147 Identities=14% Similarity=0.119 Sum_probs=95.2
Q ss_pred CceEEecCC-C---cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC----
Q psy3125 1 MACTVMGLG-R---PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK---- 71 (163)
Q Consensus 1 l~C~~~~~~-~---~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~---- 71 (163)
|.|.+.+.+ + .|.|+| ++..+..+. + .. ...+.+|.|.+++.+|+|.|+|.+.+ .+.
T Consensus 106 L~C~~~g~~~~~~~~v~W~k--~g~~l~~~~-------~---~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 171 (450)
T 1z7z_I 106 LRCQVEGGAPRANLTVVLLR--GEKELKREP-------A---VG--EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLE 171 (450)
T ss_dssp EEEEEECCBCGGGEEEEEEE--TTEEEEEEE-------C---CT--TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSC
T ss_pred EEEEecCCCCCcCcEEEEee--CCEEeeccc-------c---cc--cccceEEEEEeeccccCceEEEEEEcccCCCCce
Confidence 689999988 6 899998 443332111 0 00 12356899999999999999999943 221
Q ss_pred ----eeEEEEEEEEcC----CCc---eEeeCCCeEEEecCCC---C--ceeEEEEeCCCeEE--EecCCCCceEEEEecc
Q psy3125 72 ----MNMAIMLNVDDR----GRG---ARLSAGPLLNFAFPDL---L--TTNIYTYTGDARFS--VIHPQNSDEWNMKIDY 133 (163)
Q Consensus 72 ----~~~~~~l~V~~~----~~~---~~v~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~ 133 (163)
.+....|.|... +.. ..+..|..+.+.|... + .....|++++..+. +..........+.+ +
T Consensus 172 ~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~ 250 (450)
T 1z7z_I 172 LFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASV-S 250 (450)
T ss_dssp EEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCEEEEETTEEEEEEEE-E
T ss_pred EEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCceEEecCCceeEEEEE-E
Confidence 113345555532 211 4567789999999632 3 57888888765322 11111111222233 7
Q ss_pred cCcCCCe--eEEEEc-CCCCCccEEEEEEEec
Q psy3125 134 AQKRDAG--IYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 134 v~~~D~G--~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
++.+|+| .|+|.| |..+..+..+.|.|..
T Consensus 251 v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~ 282 (450)
T 1z7z_I 251 VTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (450)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEhhhCCcEEEEEEEccCCccEEEEEEEEEec
Confidence 8999999 999999 8878888888888864
No 218
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.53 E-value=2.3e-14 Score=100.64 Aligned_cols=154 Identities=14% Similarity=0.184 Sum_probs=88.7
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEecce---E--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTNIY---T--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~~~---~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.. ..|.|+|.... . ++..... . ....+||.+..+...++++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 99 (263)
T 3iu4_H 20 ITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSG 99 (263)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 689998643 78999986432 1 1111110 1 112579998765445789999999999999999999954
Q ss_pred CC---------CeeEEEEEEEEcCC-CceE---------eeCCCeEEEecCCC---C-ceeEEEEeCCCe---EEE----
Q psy3125 69 EP---------KMNMAIMLNVDDRG-RGAR---------LSAGPLLNFAFPDL---L-TTNIYTYTGDAR---FSV---- 118 (163)
Q Consensus 69 ~~---------~~~~~~~l~V~~~~-~~~~---------v~~~~~~~~~~~~~---~-~~~~~~~~~~~~---~~~---- 118 (163)
.. .....+.|.|.... ..+. +..|..+.+.|... + ...+.| ..... ...
T Consensus 100 ~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W-~~~~~~~~~~~~~~~ 178 (263)
T 3iu4_H 100 VREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW-NSGALTSGVHTFPAV 178 (263)
T ss_dssp CC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE-GGGTBCTTEEECCCE
T ss_pred CCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE-CCcccCCceeecCce
Confidence 32 12234467775321 1111 12456677888532 2 245777 32221 110
Q ss_pred ecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 119 IHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 119 ~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
..... ...+.|.|.....+| |.|+|.| +..+......
T Consensus 179 ~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~ 218 (263)
T 3iu4_H 179 LQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 218 (263)
T ss_dssp ECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEE
T ss_pred ECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeE
Confidence 11111 113469999998889 9999999 6554443333
No 219
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.53 E-value=4.9e-14 Score=96.67 Aligned_cols=155 Identities=12% Similarity=0.122 Sum_probs=90.8
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Ee-cc--e-Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TT-NI--Y-TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~-~~--~-~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..|.|+|.... ..+ .. .. . .. ...+||.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 99 (226)
T 3mlr_H 20 ISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRL 99 (226)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcccCEEEEEeEc
Confidence 689998743 78999996432 122 11 10 1 11 1247898876544568999999999999999999995
Q ss_pred CCC----------CeeEEEEEEEEcCC---CceE-------eeCCCeEEEecCCC---C-ceeEEEEeCCCe---EE---
Q psy3125 68 TEP----------KMNMAIMLNVDDRG---RGAR-------LSAGPLLNFAFPDL---L-TTNIYTYTGDAR---FS--- 117 (163)
Q Consensus 68 ~~~----------~~~~~~~l~V~~~~---~~~~-------v~~~~~~~~~~~~~---~-~~~~~~~~~~~~---~~--- 117 (163)
+.. .....+.|.|.... +.+. +..|..+.+.|... + ...+.| ..... ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W-~~~~~~~~~~~~~ 178 (226)
T 3mlr_H 100 YLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW-NSGALTSGVHTFP 178 (226)
T ss_dssp EEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE-GGGTCCTTEEECC
T ss_pred cCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE-CCccccCCeEeCC
Confidence 421 11233456665321 1111 12466778888532 2 345677 22221 11
Q ss_pred -EecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 118 -VIHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 118 -~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
.....+ ...+.|.|.+...+| |.|+|.| +..+.......
T Consensus 179 ~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 179 AVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 221 (226)
T ss_dssp CEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEE
T ss_pred cEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEE
Confidence 011111 123469999999999 9999999 65554444433
No 220
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.52 E-value=2.2e-13 Score=94.82 Aligned_cols=145 Identities=8% Similarity=0.097 Sum_probs=87.5
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEecce----EecCCC-eEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTTNIY----TYTGDA-RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~~~~----~~~~~~-r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 70 (163)
|.|.+.+.+ +.|.|+|...+. ++..... .....+ ||.+..... .. |.|.+++.+|+|.|.|.+.+..
T Consensus 21 L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~-L~I~~v~~~DsG~Y~C~~~~~~ 97 (253)
T 3to4_D 21 LRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTD--TE-LRLQVANMSQGRTLYCTSSADH 97 (253)
T ss_dssp EEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSS--SC-CEEEEESCSSCEEEEEEEECSC
T ss_pred EEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCC--Ce-EEEccCChhhCeEEEEEEecCC
Confidence 689988888 999999853321 1111110 000123 888876432 22 9999999999999999995321
Q ss_pred -------CeeEEEEEEEEcC-----CCceEee--------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEe----cCC
Q psy3125 71 -------KMNMAIMLNVDDR-----GRGARLS--------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVI----HPQ 122 (163)
Q Consensus 71 -------~~~~~~~l~V~~~-----~~~~~v~--------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~----~~~ 122 (163)
.....+.|.|... ++.+.+. .|..+.+.|... +. ..+.|++++..+... ...
T Consensus 98 ~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~ 177 (253)
T 3to4_D 98 WTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQP 177 (253)
T ss_dssp CSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSC
T ss_pred CCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCCceeccccc
Confidence 2234456777642 2223332 236788888632 22 367898876543210 000
Q ss_pred -------CCc----eEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 123 -------NSD----EWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 123 -------~~~----~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
... ...|.|.....+| .|.|+|.| +.
T Consensus 178 ~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~ 216 (253)
T 3to4_D 178 LKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (253)
T ss_dssp EESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred ccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeC
Confidence 111 2468898888888 77999999 44
No 221
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.51 E-value=2.5e-13 Score=82.29 Aligned_cols=81 Identities=19% Similarity=0.280 Sum_probs=63.4
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.+ +.|.|+|.+ ..++..+......++|+.+... ...+.+|.|.+++.+|+|.|+|.+.+.+..+..+.|.
T Consensus 26 L~C~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~L~ 103 (108)
T 3m45_A 26 LTCRVDQNDNTSLQWSNPA-QQTLYFDDKKALRDNRIELVRA-SWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLT 103 (108)
T ss_dssp EEEEESSCSSCCEEEECTT-CCEEEETTEECSCCTTEEEEEE-SSSEEEEEECSCCGGGCEEEEEEECSSSCEEEEEEEE
T ss_pred EEeEEcCCCccEEEEEcCC-CceEEEcCCcccccCcEEEeec-CCCcEEEEECCCChhHCeEEEEEEEcCCCcEEEEEEE
Confidence 689999999 999999733 2244455555566779987653 2358899999999999999999996566777888888
Q ss_pred EEcC
Q psy3125 80 VDDR 83 (163)
Q Consensus 80 V~~~ 83 (163)
|.++
T Consensus 104 V~~~ 107 (108)
T 3m45_A 104 VLGV 107 (108)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8765
No 222
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.51 E-value=1.7e-12 Score=88.09 Aligned_cols=128 Identities=13% Similarity=0.133 Sum_probs=86.0
Q ss_pred CceEEecCC-C--cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEE
Q psy3125 1 MACTVMGLG-R--PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~--~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~ 76 (163)
|.|.+ +.| + .|.|+|.+.. + ++.... .....|.|.+++.+|+|.|.|.+.+ .......+
T Consensus 27 L~C~a-~~p~P~~~i~W~~~~~~--l----------~~~~~~----~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 27 LTCRL-ACADRGASVQWRGLDTS--L----------GAVQSD----TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEEEE-CCSSTTCEEEEESSTTT--T----------CCEEEE----SSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEEEC-CCCCCCcceEEeecccc--c----------CcEEec----CCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 57999 887 6 9999983321 1 222222 2467799999999999999999954 34456778
Q ss_pred EEEEEcCCCceEee-----CCCeEEEecCCC---C----ceeEEEEeCCCeEE---Eec--------C---CCC----ce
Q psy3125 77 MLNVDDRGRGARLS-----AGPLLNFAFPDL---L----TTNIYTYTGDARFS---VIH--------P---QNS----DE 126 (163)
Q Consensus 77 ~l~V~~~~~~~~v~-----~~~~~~~~~~~~---~----~~~~~~~~~~~~~~---~~~--------~---~~~----~~ 126 (163)
.|.|..+|..+.+. .|... +.|... + ...+.|++++..+. +.. . ... ..
T Consensus 90 ~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vt 168 (210)
T 1gsm_A 90 QLLVYAFPNQLTVSPAALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVT 168 (210)
T ss_dssp EEEEEBCCSEEEEESSSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEE
T ss_pred EEEEEecCCCcEEccceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEE
Confidence 89999887655554 45556 888532 2 34699998876431 100 0 011 13
Q ss_pred EEEEecccCcCCCeeEEEEc
Q psy3125 127 WNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 127 ~~L~i~~v~~~D~G~Y~C~a 146 (163)
++|.+...+.+|.+.|+|+|
T Consensus 169 s~~~~~~~~~D~~~~~tC~a 188 (210)
T 1gsm_A 169 ERWRLPPLGTPVPPALYCQA 188 (210)
T ss_dssp EEEECCCCCSSCCSEEEEEE
T ss_pred EEEeecCCcccCCceEEEEE
Confidence 44667788888889999999
No 223
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.50 E-value=5.4e-13 Score=105.52 Aligned_cols=149 Identities=15% Similarity=0.142 Sum_probs=93.7
Q ss_pred CceEEecCCCcEEEEEec-CCeeEEecceEecCCCe-EEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCe--eEEE
Q psy3125 1 MACTVMGLGRPVSWMRKR-DLHILTTNIYTYTGDAR-FSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKM--NMAI 76 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~-~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~--~~~~ 76 (163)
|.|.+.+..+.+.|+|.. +..+ ..+++ +... ....|.|.+++.+|+|.|+|.+...... +...
T Consensus 148 L~C~~~~p~~~v~w~~~~~~~~~--------~~~~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~ 214 (772)
T 3v2a_R 148 IPCLGSISNLNVSLCARYPEKRF--------VPDGNRISWD-----SKKGFTIPSYMISYAGMVFCEAKINDESYQSIMY 214 (772)
T ss_dssp ECCCCSCSSCCEEEEEETTTEEE--------CCCSSSCEEE-----TTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEE
T ss_pred EEccCCCCCcEEEEEecCCCccc--------cCCCceeecC-----CCCCeEecCCChhhCeEEEEEEEECCceEEEEEE
Confidence 579988733999999831 1111 12221 2222 1345999999999999999999543221 1112
Q ss_pred EEEEEc---------CCCceEeeCCCeEEEecCC----CCceeEEEEeCCCeEEEe------c------CCCCceEEEEe
Q psy3125 77 MLNVDD---------RGRGARLSAGPLLNFAFPD----LLTTNIYTYTGDARFSVI------H------PQNSDEWNMKI 131 (163)
Q Consensus 77 ~l~V~~---------~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~------~------~~~~~~~~L~i 131 (163)
.+.+.. ++....+..|..+.+.|.. .....+.|++++...... . ........|.|
T Consensus 215 ~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 294 (772)
T 3v2a_R 215 IVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTI 294 (772)
T ss_dssp EEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEE
T ss_pred EEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEE
Confidence 233322 1223467788999999964 233568898876643210 0 11223567999
Q ss_pred cccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 132 DYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 132 ~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
.+++.+|+|.|+|.| +..+..+..+.|.|..
T Consensus 295 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~ 326 (772)
T 3v2a_R 295 DGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 326 (772)
T ss_dssp SSCCSTTCSEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CcCCcCCCeEEEEEEEcCCcceeEEEEEEEeC
Confidence 999999999999999 8778888888888864
No 224
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.50 E-value=3.7e-13 Score=95.52 Aligned_cols=138 Identities=14% Similarity=0.215 Sum_probs=85.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcc-cCcCCCeeEEEEe-eCCCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDY-AQKRDAGIYECQV-NTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~~-~~~~~~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+ ....++.+.. .....+|.|.+ ++.+|+|.|+|.+ +..+.....+.
T Consensus 124 l~C~~~g~p~p~i~W~~--~~~~~-------~~~~~~~~~~--~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 192 (305)
T 2nzi_A 124 IKIPFSGKPDPVITWQK--GQDLI-------DNNGHYQVIV--TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192 (305)
T ss_dssp EEEEEEEESCCEEEEEE--SSSBC-------CSSSSCEEEE--CSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCCEEEEEE--CCEEC-------CCCCcEEEEE--cCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEE
Confidence 579999999 9999998 32222 2345666654 23467899999 9999999999999 55566677788
Q ss_pred EEEEcCCCceE---ee--CCCeEEEecCCCC---ceeEEEE----eC--CCeEEEecCCCCceEEEEecccCcCCCeeEE
Q psy3125 78 LNVDDRGRGAR---LS--AGPLLNFAFPDLL---TTNIYTY----TG--DARFSVIHPQNSDEWNMKIDYAQKRDAGIYE 143 (163)
Q Consensus 78 l~V~~~~~~~~---v~--~~~~~~~~~~~~~---~~~~~~~----~~--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 143 (163)
|.|...+..+. +. .+..+.+.|.... ...+..+ .. ...+..... .....|.|.++...|.|.|+
T Consensus 193 l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~--~~~~~~~i~~l~~~~~y~~~ 270 (305)
T 2nzi_A 193 LDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQ--ARETRYTVINLFGKTSYQFR 270 (305)
T ss_dssp EEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEE--ESSSEEEECSCCSSCEEEEE
T ss_pred EEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECcc--ccCceEEecCCCCCCeEEEE
Confidence 88886643221 11 2344555443210 0011111 00 111111110 11335999999999999999
Q ss_pred EEc-CCCCC
Q psy3125 144 CQV-NTEPK 151 (163)
Q Consensus 144 C~a-~~~~~ 151 (163)
|.| |..|.
T Consensus 271 ~~A~N~~G~ 279 (305)
T 2nzi_A 271 VIAENKFGL 279 (305)
T ss_dssp EEEEETTEE
T ss_pred EEEEeCCcc
Confidence 999 77653
No 225
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.49 E-value=3.2e-14 Score=102.26 Aligned_cols=141 Identities=12% Similarity=0.158 Sum_probs=83.3
Q ss_pred CceEEecC-C--CcEEEEEecCCeeEEecce---EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-Cee
Q psy3125 1 MACTVMGL-G--RPVSWMRKRDLHILTTNIY---TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-KMN 73 (163)
Q Consensus 1 l~C~~~~~-~--~~v~W~k~~~~~~~~~~~~---~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~~~ 73 (163)
|.|.+.+. | +.|.|+| ++..+..+.. ....+++|.+. ..|.|.++..+|+|.|+|++.+.. ...
T Consensus 29 L~C~~~g~~P~~~~v~W~k--~g~~l~~~~~~~~~~~~~g~~~~~-------s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 99 (323)
T 2wqr_A 29 LLCLVSGYTPGTIQITWLE--DGQVMDVDLSTASTTQEGELASTQ-------SELTLSQKHWLSDRTYTCQVTYQGHTFE 99 (323)
T ss_dssp EEEEEEEECCCCEEEEEEE--TTEECCGGGEEEEEEEETTEEEEE-------EEEEEEHHHHHTTCCEEEEEEETTEEEE
T ss_pred EEEEEeCeECCCeEEEEEE--CCEEcccceecCCcCccCCcEEEE-------EEEEEcHHHcCCCCcEEEEEEeCCCCcc
Confidence 67999985 3 6899998 4433332211 11113444333 258899988899999999995432 222
Q ss_pred EEEEE---------EEE-cCCCceEeeCCCeEEEecCCC---Cce---eEEEEeCCCeEEEe------cCCCC---ceEE
Q psy3125 74 MAIML---------NVD-DRGRGARLSAGPLLNFAFPDL---LTT---NIYTYTGDARFSVI------HPQNS---DEWN 128 (163)
Q Consensus 74 ~~~~l---------~V~-~~~~~~~v~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~------~~~~~---~~~~ 128 (163)
..+.+ .+. .++....+..|..+.+.|... +.. .+.|+++++..... ..... ....
T Consensus 100 ~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~ 179 (323)
T 2wqr_A 100 DSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTST 179 (323)
T ss_dssp EEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEE
T ss_pred eeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEE
Confidence 22111 111 112222355678899999632 222 78998865322100 01111 2347
Q ss_pred EEecccCcCCCeeEEEEc-CCCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
|.|.+++.+|+|.|+|.| |...
T Consensus 180 L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 180 LPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp EECCHHHHHTTCCEEEEEECTTS
T ss_pred EEECHHHccCCCCEEEEEECCCC
Confidence 999999999999999999 6543
No 226
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.49 E-value=3.2e-13 Score=93.15 Aligned_cols=147 Identities=10% Similarity=0.162 Sum_probs=87.4
Q ss_pred CceEEecCCCcEEEEEecCCe---eE-Ee--cceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--
Q psy3125 1 MACTVMGLGRPVSWMRKRDLH---IL-TT--NIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-- 70 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~---~~-~~--~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-- 70 (163)
|.|.+....+.|.|+|.+... .+ .. +.... ...+||.+... ..++++|.|.+++.+|+|.|.|.+.+..
T Consensus 19 L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 97 (238)
T 1bec_A 19 LSCQQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRP-SQEQFSLILELATPSQTSVYFCASGGGRGS 97 (238)
T ss_dssp EEEEESSCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECC-SSSEEEEEESSCCGGGCEEEEEEEESCTTC
T ss_pred EEEEeCCCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEec-CCCEEEEEEecCCcccCEEEEEEEecCCCC
Confidence 689985433999999965321 11 11 11111 12578888753 2467899999999999999999996541
Q ss_pred ----CeeEEEEEEEEcC-----CCceEe--------eCCCeEEEecCCC---C-ceeEEEEeCCCeEEEe--c--C----
Q psy3125 71 ----KMNMAIMLNVDDR-----GRGARL--------SAGPLLNFAFPDL---L-TTNIYTYTGDARFSVI--H--P---- 121 (163)
Q Consensus 71 ----~~~~~~~l~V~~~-----~~~~~v--------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~--~--~---- 121 (163)
.....+.|.|... ++.+.+ ..|..+.+.|... + ...+.|++++..+... . .
T Consensus 98 ~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~ 177 (238)
T 1bec_A 98 YAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKE 177 (238)
T ss_dssp GGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEE
T ss_pred ccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeC
Confidence 1223456777752 222222 2466777888642 2 2478898876543210 0 0
Q ss_pred -CC--CceEEEEecccCcCC-CeeEEEEc-CC
Q psy3125 122 -QN--SDEWNMKIDYAQKRD-AGIYECQV-NT 148 (163)
Q Consensus 122 -~~--~~~~~L~i~~v~~~D-~G~Y~C~a-~~ 148 (163)
.. .....|.|......| .|.|+|.| +.
T Consensus 178 ~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~ 209 (238)
T 1bec_A 178 SNYSYCLSSRLRVSATFWHNPRNHFRCQVQFH 209 (238)
T ss_dssp ETTEEEEEEEECCCHHHHTCTTCEEEEEEEEC
T ss_pred CCCCEEEEEEEEEcHHHhccCCCeEEEEEEcC
Confidence 00 012346666666555 67899999 54
No 227
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.48 E-value=5.2e-14 Score=101.17 Aligned_cols=142 Identities=9% Similarity=0.162 Sum_probs=84.3
Q ss_pred CceEEecC-C-C---cEEEEEecCCeeEEecceE--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCee
Q psy3125 1 MACTVMGL-G-R---PVSWMRKRDLHILTTNIYT--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMN 73 (163)
Q Consensus 1 l~C~~~~~-~-~---~v~W~k~~~~~~~~~~~~~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~ 73 (163)
|.|.+.+. | + .|.|+|.++ .++...... ...+++|. ...+|.|.+++.+|+|.|+|.+.+... .
T Consensus 133 L~C~~~g~~P~p~~~~i~W~k~~g-~~~~~~~~~~~~~~~g~~~-------~~~~L~I~~~~~~D~G~Y~C~a~n~~~-~ 203 (323)
T 2wqr_A 133 ITCLVVDLAPSKGTVQLTWSRASG-KPVNHSTRKEEKQRNGTLT-------VTSTLPVGTRDWIEGETYQCRVTHPHL-P 203 (323)
T ss_dssp EEEEEEEECCCSSCCEEEEEETTC-CCCCCCCCEEEECTTSCEE-------EEEEEECCHHHHHTTCCEEEEEECTTS-S
T ss_pred EEEEEeccCCCCCceEEEEEECCC-cccccccCCCccCCCCCEE-------EEEEEEECHHHccCCCCEEEEEECCCC-C
Confidence 67999985 4 5 899998442 222211111 11223332 144799999999999999999955321 1
Q ss_pred EEEEEEEEc-----CCCceEe-------eCCCeEEEecCCC---C-ceeEEEEeCCCeEE-----Ee---cCCC---Cce
Q psy3125 74 MAIMLNVDD-----RGRGARL-------SAGPLLNFAFPDL---L-TTNIYTYTGDARFS-----VI---HPQN---SDE 126 (163)
Q Consensus 74 ~~~~l~V~~-----~~~~~~v-------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~-----~~---~~~~---~~~ 126 (163)
..+.+.|.. .++.+.+ ..|..+.+.|... + ...+.|++++..+. .. .... ...
T Consensus 204 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~ 283 (323)
T 2wqr_A 204 RALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVF 283 (323)
T ss_dssp SCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEE
T ss_pred CCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEE
Confidence 122333321 1111111 1277889999642 2 23688998765332 10 0011 123
Q ss_pred EEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 127 WNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 127 ~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
..|.|.++..+|+|.|+|.| |....
T Consensus 284 s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 284 SRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EEEEEChHHccCCCEEEEEEEeCCCC
Confidence 56999999999999999999 76655
No 228
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=79.97 Aligned_cols=69 Identities=20% Similarity=0.435 Sum_probs=50.6
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+.++.|.|+| ++. .+..++++.+.. ..+..+|.|.+++.+|+|.|+|.+.+ .+..+.|.|
T Consensus 16 l~C~vs~p~p~v~W~k--~g~-------~l~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~a~l~V 81 (84)
T 2lu7_A 16 LVVHLSGPGGPVRWYK--DGE-------RLASQGRVQLEQ--AGARQVLRVQGARSGDAGEYLCDAPQ---DSRIFLVSV 81 (84)
T ss_dssp EECCCSCCSTTCEEEE--TTE-------ECCCCSSEEEEE--CSSCEEEEESSCSSTTCEEEEEECTT---TCEEEEEEE
T ss_pred EEEEECCCCcEEEEEE--CCE-------EccccccEEEee--cCCeEEEEecCCCCcccEEEEEEECC---EEEEEEEEE
Confidence 6799977339999998 333 233566777775 34567899999999999999999844 245566777
Q ss_pred EcC
Q psy3125 81 DDR 83 (163)
Q Consensus 81 ~~~ 83 (163)
.+|
T Consensus 82 ~eP 84 (84)
T 2lu7_A 82 EEP 84 (84)
T ss_dssp CCC
T ss_pred ECC
Confidence 653
No 229
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.48 E-value=1e-13 Score=106.80 Aligned_cols=144 Identities=13% Similarity=0.132 Sum_probs=89.0
Q ss_pred CceEE-ecCC-CcEEEEEecCCeeEEecceEe----cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe-
Q psy3125 1 MACTV-MGLG-RPVSWMRKRDLHILTTNIYTY----TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM- 72 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~- 72 (163)
|.|.+ .+.| +.|.|+|.+....+. ..... ...+|+.+.. +.+|.|.+++.+|+|.|+|++.+ .+..
T Consensus 386 L~C~~~~~~~~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~r~~~~~-----~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~ 459 (581)
T 3o3u_N 386 LKCKGAPKKPPQRLEWKLNTGRTEAW-KVLSPQGGGPWDSVARVLP-----NGSLFLPAVGIQDEGIFRCQAMNRNGKET 459 (581)
T ss_dssp ECCTTCCSSSSCEEEEEEEETTSSSC-EECCSCCSSGGGGTSEECT-----TSCEEESSCCGGGCEEEEEEEECTTSCEE
T ss_pred EeeeecCCCCCceEEEEEcCCeeEEE-EecccCCCCCcCCcEEEcC-----CceEEEeccccccCeEEEEEEEcCCCcee
Confidence 57998 6777 999999854321111 00000 1134555443 34799999999999999999954 3333
Q ss_pred eEEEEEEEEcCCCceEee-------CC-CeEEEecCC---CCceeEEEEeCCCeE-------EEe----cC-CC---Cce
Q psy3125 73 NMAIMLNVDDRGRGARLS-------AG-PLLNFAFPD---LLTTNIYTYTGDARF-------SVI----HP-QN---SDE 126 (163)
Q Consensus 73 ~~~~~l~V~~~~~~~~v~-------~~-~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~----~~-~~---~~~ 126 (163)
...+.|.|..++..+.+. .+ ..+.+.|.. .+.+.+.|+.++..+ .+. .. .. ...
T Consensus 460 ~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~ 539 (581)
T 3o3u_N 460 KSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQ 539 (581)
T ss_dssp EEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEE
T ss_pred EEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEE
Confidence 567889998765433322 22 334457863 245788998875422 111 10 11 124
Q ss_pred EEEEecccCc-CCCeeEEEEc-CCCC
Q psy3125 127 WNMKIDYAQK-RDAGIYECQV-NTEP 150 (163)
Q Consensus 127 ~~L~i~~v~~-~D~G~Y~C~a-~~~~ 150 (163)
+.|.|.++++ ++.|.|+|.| |..+
T Consensus 540 s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 540 SELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp EEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred EEEEEEeccccCCCceEEEEEeccCC
Confidence 5699999994 5588999999 6643
No 230
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.47 E-value=1.1e-12 Score=96.00 Aligned_cols=142 Identities=11% Similarity=0.183 Sum_probs=87.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+..+ ...++.+.. .....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 120 l~C~~~g~p~~~i~W~~--~g~~l~~~-----~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 190 (389)
T 2jll_A 120 ISCDVKSNPPASIHWRR--DKLVLPAK-----NTTNLKTYS--TGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYIL 190 (389)
T ss_dssp EEECEEEESCCEEEEEE--TTEESSCT-----TCTTEEEEE--CSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCeEEEEE--CCccCCcc-----cCceEEEec--cCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence 579999999 9999998 33322211 123555554 234678999999999999999999 445555666667
Q ss_pred EEEcCCCce---Ee--eCCCeEEEecCCC------Cc--eeEEEEeCCC-eEEEecCCCCceEEEEecccCcCCCeeEEE
Q psy3125 79 NVDDRGRGA---RL--SAGPLLNFAFPDL------LT--TNIYTYTGDA-RFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 79 ~V~~~~~~~---~v--~~~~~~~~~~~~~------~~--~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.|...+..+ .+ ..+..+.+.|... +. -.+.|...+. .+.... .......|.|.++...|.|.|+|
T Consensus 191 ~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~y~~~v 269 (389)
T 2jll_A 191 ALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-SHGVQTMVVLNNLEPNTTYEIRV 269 (389)
T ss_dssp EECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-CSTTCSEEEECSCCTTCEEEEEE
T ss_pred EecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-ccCCcceEEECCccCCCEEEEEE
Confidence 665544322 11 1233455544311 11 1233444332 221111 12234569999999999999999
Q ss_pred Ec-CCCCCc
Q psy3125 145 QV-NTEPKM 152 (163)
Q Consensus 145 ~a-~~~~~~ 152 (163)
.| |..|..
T Consensus 270 ~A~N~~G~~ 278 (389)
T 2jll_A 270 AAVNGKGQG 278 (389)
T ss_dssp EEEESSCBC
T ss_pred EEEcCCccC
Confidence 99 776643
No 231
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.47 E-value=8.9e-14 Score=83.72 Aligned_cols=73 Identities=21% Similarity=0.354 Sum_probs=54.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.|.| +.|.|+| ++..+.. ....|+.+.. ..+..+|.|.+++.+|+|.|+|.+ |..+..+..+.|
T Consensus 25 l~C~~~g~P~p~v~W~k--~g~~i~~-----~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 95 (100)
T 3knb_A 25 VACAFTGEPTPEVTWSC--GGRKIHS-----QEQGRFHIEN--TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNI 95 (100)
T ss_dssp EEEEEEEESCCEEEEEE--TTEECCT-----TGGGTEEEEE--CSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEecCCEEEEEE--CceEeee-----eccceeeeec--ccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEE
Confidence 689999999 9999998 3333221 1234777765 335778999999999999999999 555666777778
Q ss_pred EEEc
Q psy3125 79 NVDD 82 (163)
Q Consensus 79 ~V~~ 82 (163)
.|..
T Consensus 96 ~V~~ 99 (100)
T 3knb_A 96 HIRS 99 (100)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7763
No 232
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=4.1e-13 Score=80.78 Aligned_cols=71 Identities=15% Similarity=0.265 Sum_probs=55.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+ .| +.|.|+| ++.. +..+.|+.+.. .....+|.|.+++.+|+|.|+|.+.+. ..+..+.|.
T Consensus 27 l~C~v--~p~p~v~W~k--~g~~-------l~~~~r~~i~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~-~~~~~a~L~ 92 (100)
T 2yuz_A 27 LKCEI--SENIPGKWTK--NGLP-------VQESDRLKVVQ--KGRIHKLVIANALTEDEGDYVFAPDAY-NVTLPAKVH 92 (100)
T ss_dssp EEEEC--SSCCCEEEEE--TTEE-------CCCCSSEEEEE--CSSEEEEEESSCCGGGCSEEEEEESSS-CCCEEEEEE
T ss_pred EEEEe--CCCCeEEEEE--CCEE-------CCCCCcEEEEE--eCCEEEEEECCCChhhCEEEEEEEcCC-CeeEEEEEE
Confidence 67999 56 9999998 3332 23567888775 345678999999999999999999665 567788899
Q ss_pred EEcCCC
Q psy3125 80 VDDRGR 85 (163)
Q Consensus 80 V~~~~~ 85 (163)
|.++|.
T Consensus 93 V~~~P~ 98 (100)
T 2yuz_A 93 VISGPS 98 (100)
T ss_dssp EECCSC
T ss_pred EeCCCC
Confidence 987753
No 233
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.47 E-value=7.1e-13 Score=92.18 Aligned_cols=148 Identities=11% Similarity=0.139 Sum_probs=89.5
Q ss_pred CceEEecCCCcEEEEEecCC---eeEEecce---Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC---
Q psy3125 1 MACTVMGLGRPVSWMRKRDL---HILTTNIY---TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE--- 69 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~---~~~~~~~~---~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~--- 69 (163)
|.|.+....+.|.|+|.+.. ..+.+... .. ...+|+.+... ..++.+|.|.+++.+|+|.|.|.+.+.
T Consensus 23 L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 101 (252)
T 1oga_E 23 LSCEQNLNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSRE-KKESFPLTVTSAQKNPTAFYLCASSSRSSY 101 (252)
T ss_dssp ECCEECSCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCS-STTBCCEEECSCCSCCCEEEEEEEESSTTS
T ss_pred EEEEeCCCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEec-CCCEEEEEECcCChhhCEEEEEEEecCCcc
Confidence 68998543399999986422 12211110 01 12478888753 245778999999999999999999653
Q ss_pred -CCeeEEEEEEEEcC-----CCceEee--------CCCeEEEecCCC---C-ceeEEEEeCCCeEEEe--cC--------
Q psy3125 70 -PKMNMAIMLNVDDR-----GRGARLS--------AGPLLNFAFPDL---L-TTNIYTYTGDARFSVI--HP-------- 121 (163)
Q Consensus 70 -~~~~~~~~l~V~~~-----~~~~~v~--------~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~--~~-------- 121 (163)
......+.|.|... ++.+.+. .|..+.+.|... + ...+.|++++..+... ..
T Consensus 102 ~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~ 181 (252)
T 1oga_E 102 EQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQP 181 (252)
T ss_dssp CCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCT
T ss_pred ceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccc
Confidence 12223456777642 2223332 356788889642 3 2478899876543210 00
Q ss_pred -CCCc----eEEEEecccCcC-CCeeEEEEc-CCC
Q psy3125 122 -QNSD----EWNMKIDYAQKR-DAGIYECQV-NTE 149 (163)
Q Consensus 122 -~~~~----~~~L~i~~v~~~-D~G~Y~C~a-~~~ 149 (163)
.... ...|.|.+.... |.|.|+|.| +..
T Consensus 182 ~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 216 (252)
T 1oga_E 182 ALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYG 216 (252)
T ss_dssp TSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred cCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCC
Confidence 0111 234888877664 678999999 543
No 234
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.46 E-value=1.7e-12 Score=93.28 Aligned_cols=150 Identities=13% Similarity=0.144 Sum_probs=81.9
Q ss_pred CceEEecCC-C--cEEEEEecCCeeEEecceEec---CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-C--
Q psy3125 1 MACTVMGLG-R--PVSWMRKRDLHILTTNIYTYT---GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-K-- 71 (163)
Q Consensus 1 l~C~~~~~~-~--~v~W~k~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~-- 71 (163)
|.|.+.+.+ + .|.|+| ++..+..+..... .++.|.+. ..|.|.....+|.|.|+|.+.+.. .
T Consensus 137 l~C~~~g~p~~~~~v~W~k--~g~~l~~~~~~~~~~~~~~~~~~~-------s~L~i~~~~~d~~g~Y~C~a~n~~~~~~ 207 (327)
T 2wng_A 137 FTCESHGFSPRDITLKWFK--NGNELSDFQTNVDPVGESVSYSIH-------STAKVVLTREDVHSQVICEVAHVTLQGD 207 (327)
T ss_dssp EEEEEEEEBSSCCEEEEEE--TTEECCCEEEEEECSSCCSCEEEE-------EEEEEECCTTGGGCEEEEEEECTTSCSC
T ss_pred EEEEEeCccCCCcEEEEEE--CCEEccccccccccccCCCceEEE-------EEEEEechhcCcCceEEEEEeccccCCC
Confidence 579999887 4 899998 3333321211111 11222222 247887777777899999995422 2
Q ss_pred -eeEEEEEE--EEcCCCceE-----eeCCCeEEEecCCC---Cc-eeEEEEeCCCeEEEec------CCCC---ceEEEE
Q psy3125 72 -MNMAIMLN--VDDRGRGAR-----LSAGPLLNFAFPDL---LT-TNIYTYTGDARFSVIH------PQNS---DEWNMK 130 (163)
Q Consensus 72 -~~~~~~l~--V~~~~~~~~-----v~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~------~~~~---~~~~L~ 130 (163)
......+. |..++ .+. +..|..+.+.|... +. ..+.|++++..+.... .... ....|.
T Consensus 208 ~~~~~~~~~~~v~~~P-~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~ 286 (327)
T 2wng_A 208 PLRGTANLSETIRVPP-TLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLL 286 (327)
T ss_dssp CEEEEEEGGGTBCBCC-EEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEE
T ss_pred cccceEEeccccCCCC-EEEEecCCcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEE
Confidence 22233332 22222 111 44688889999643 22 2689998887664321 1111 124599
Q ss_pred ecccCcCCCeeEEEEc-CCCC-CccEEEEEEE
Q psy3125 131 IDYAQKRDAGIYECQV-NTEP-KMNMAIMLNV 160 (163)
Q Consensus 131 i~~v~~~D~G~Y~C~a-~~~~-~~~~~~~L~V 160 (163)
|.++..+|+|.|+|.| |..+ ..+.++.+.+
T Consensus 287 i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~~~ 318 (327)
T 2wng_A 287 VNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKV 318 (327)
T ss_dssp C-------CCEEEEEEEETTCCCEEEEEECC-
T ss_pred EccccccCCCEEEEEEEeCCCCCchhheEEEe
Confidence 9999999999999999 7665 4455555443
No 235
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=5e-13 Score=82.07 Aligned_cols=73 Identities=18% Similarity=0.240 Sum_probs=56.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+ ..+.|+.+.. .....+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 27 l~C~~~g~p~p~i~W~k--~~~~~-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 95 (114)
T 2cqv_A 27 LFGKVTGTQPITCTWMK--FRKQI-------QESEHMKVEN--SENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNL 95 (114)
T ss_dssp EEEEEESSSSCEEEEEE--SSSBC-------CCSSSEEEEE--CSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEE
T ss_pred EEEEEEcCCCCEEEEEE--CCEEC-------cCCCCEEEEE--cCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEE
Confidence 689999999 9999998 22222 2345777765 2357789999999999999999994 45566778888
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|...+
T Consensus 96 ~V~~~p 101 (114)
T 2cqv_A 96 TVVDKP 101 (114)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 888764
No 236
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.44 E-value=3.7e-13 Score=94.57 Aligned_cols=157 Identities=11% Similarity=0.171 Sum_probs=90.7
Q ss_pred CceEEecC--C-CcEEEEEecCCe---eE-Eecc---e-E--ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLH---IL-TTNI---Y-T--YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~---~~-~~~~---~-~--~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+. . ..|.|+|..... .+ .... . . ....+||.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 43 L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 43 VSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDTAIYYCLTG 122 (267)
T ss_dssp EEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCChhhCEEEEEEEC
Confidence 57999763 3 789999964321 22 1111 0 1 11247999876544578999999999999999999995
Q ss_pred -------CCC-------------------CeeEEEEEEEEc-CCCceEe---------eCCCeEEEecCCC---C-ceeE
Q psy3125 68 -------TEP-------------------KMNMAIMLNVDD-RGRGARL---------SAGPLLNFAFPDL---L-TTNI 107 (163)
Q Consensus 68 -------~~~-------------------~~~~~~~l~V~~-~~~~~~v---------~~~~~~~~~~~~~---~-~~~~ 107 (163)
... .....+.|.|.. ....+.+ ..|..+.+.|... + ...+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v 202 (267)
T 3u1s_H 123 SKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 202 (267)
T ss_dssp EEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEEEEEEEEEEEBSSCCEE
T ss_pred cCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcEEEEEEEeEEECCCeEE
Confidence 110 112234566652 2211211 2356677888532 2 3456
Q ss_pred EEEeCCCeE----EE----ecCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 108 YTYTGDARF----SV----IHPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 108 ~~~~~~~~~----~~----~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
.| ++... .. ..... ...+.|.|.....+| |.|+|.| +..........+.|
T Consensus 203 ~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 203 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 77 32211 11 11111 123469999999999 9999999 55444444444433
No 237
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.43 E-value=1.3e-12 Score=83.57 Aligned_cols=84 Identities=17% Similarity=0.282 Sum_probs=64.4
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.+ +.|.|++.+...+ ..++.....++|+.+... ...+.+|.|.+++.+|+|.|+|.+.+.+.....+.|.
T Consensus 58 L~C~~~~~~~~~i~W~~~~~~~i-~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~L~ 135 (145)
T 1z9m_A 58 LKCQVKDHEDSSLQWSNPAQQTL-YFGEKRALRDNRIQLVTS-TPHELSISISNVALADEGEYTCSIFTMPVRTAKSLVT 135 (145)
T ss_dssp EEEECSCCTTCCEEEECTTCCEE-EETTEECSCCTTEEEEEE-CSSEEEEEECSCCGGGCEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEcCCCCcEEEEECCCCcEE-EECCceecccCCEEEecC-CCCeEEEEECCCChhhCEEEEEEEEcCCCceEEEEEE
Confidence 689999999 9999996444433 445555556788887653 3457899999999999999999995547777888899
Q ss_pred EEcCCCc
Q psy3125 80 VDDRGRG 86 (163)
Q Consensus 80 V~~~~~~ 86 (163)
|.+++..
T Consensus 136 V~~~P~~ 142 (145)
T 1z9m_A 136 VLGIPQK 142 (145)
T ss_dssp EECCCC-
T ss_pred EEeCCCC
Confidence 9887643
No 238
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.42 E-value=2.7e-13 Score=101.29 Aligned_cols=144 Identities=9% Similarity=0.063 Sum_probs=84.2
Q ss_pred CceEEecC-C-C-cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEE
Q psy3125 1 MACTVMGL-G-R-PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~-~-~-~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~ 76 (163)
|.|.+.+. | + .|.|+|.+............. .++|.+. ..|.|.+++.+| |.|+|.+.+ .+......
T Consensus 143 L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~-~~~~~~~-------s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~ 213 (444)
T 1igt_B 143 LGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQ-SDLYTLS-------SSVTVTSSTWPS-QSITCNVAHPASSTKVDK 213 (444)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEE-TTEEEEE-------EEEEECSTTTTT-SCCEEEEEETTTTEEEEE
T ss_pred EEEEEcceeCCCcEEEEecCCCCCCeEecCcccc-CCcEEEE-------EEEEEchhhcCC-CeEEEEEEeCCCCcceEE
Confidence 57999985 6 5 999987322110110000111 1334332 359999999999 999999944 33322222
Q ss_pred EEEE-------------------------EcCCCceE-eeCCCeEEEecCCC------CceeEEEEeCCCeEEEe-----
Q psy3125 77 MLNV-------------------------DDRGRGAR-LSAGPLLNFAFPDL------LTTNIYTYTGDARFSVI----- 119 (163)
Q Consensus 77 ~l~V-------------------------~~~~~~~~-v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----- 119 (163)
.+.+ ..++.... +..|..+.+.|... ....+.|++++..+...
T Consensus 214 ~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~ 293 (444)
T 1igt_B 214 KIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTH 293 (444)
T ss_dssp ECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCC
T ss_pred EeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccc
Confidence 2211 11111111 35688889999632 23478899887532110
Q ss_pred --cCCC--CceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 120 --HPQN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 120 --~~~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
...+ .....|.|.+++.+|+|.|+|.| |..+...
T Consensus 294 ~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~ 332 (444)
T 1igt_B 294 REDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAP 332 (444)
T ss_dssp EEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSC
T ss_pred eeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCc
Confidence 0000 12457999999999999999999 7766653
No 239
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.42 E-value=1.8e-11 Score=83.73 Aligned_cols=146 Identities=17% Similarity=0.326 Sum_probs=93.1
Q ss_pred CceEEecCC---CcEEEEEecCCeeEE-------ecceE-ec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILT-------TNIYT-YT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~-------~~~~~-~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.|.. ..|.|+|+.++.-+. .+... +. -.+||.+..+...+...|.|.+++.+|++.|.|.-.
T Consensus 20 lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~~eDTAvYYCAr~ 99 (254)
T 4f9p_D 20 VSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTSDDSAVYFCARS 99 (254)
T ss_dssp EEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEECEES
T ss_pred EEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCCCCCCEEEEEEec
Confidence 589999987 789999975443321 12222 21 247999998777889999999999999999999752
Q ss_pred CCCCe-eEEEEEE---------------------------EEcCCCceEeeCCCeEEEecCC--CCceeEEEEeCCC---
Q psy3125 68 TEPKM-NMAIMLN---------------------------VDDRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDA--- 114 (163)
Q Consensus 68 ~~~~~-~~~~~l~---------------------------V~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~--- 114 (163)
..... -.-+.+. +...|....+..|..+.+.|.. .....+.|+...+
T Consensus 100 ~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~~~~l~WyqQ~PG~~ 179 (254)
T 4f9p_D 100 DYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSISNNLHWYRQKSHES 179 (254)
T ss_dssp SSCCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCCTTCCEEEEECTTSC
T ss_pred CCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCcccCCcEEEEECCCCC
Confidence 21100 0001111 2222344567788899999952 2223466774421
Q ss_pred -eEEEec--------------CCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 115 -RFSVIH--------------PQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 115 -~~~~~~--------------~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
++.+.. .......+|+|.+++.+|++.|+|+-
T Consensus 180 p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~YYC~q 226 (254)
T 4f9p_D 180 PRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIYFCQQ 226 (254)
T ss_dssp CEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEEEEEE
T ss_pred CEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEEEEee
Confidence 222210 11234567999999999999999976
No 240
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.42 E-value=9.6e-13 Score=79.20 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=54.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....++.+.. .....+|.|.+++.+|+|.|+|.+ |..+..+..+.|
T Consensus 28 l~C~~~g~p~p~i~W~k--~~~~-------~~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 96 (103)
T 3qp3_A 28 FILNVQSKPTAEVKWYH--NGVE-------LQESSKIHYTN--TSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATL 96 (103)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCCCSSEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCEEEEEE--CCEE-------CCCCCCEEEEE--CCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 679999999 9999998 3222 23445776664 235678999999999999999999 555666777778
Q ss_pred EEEcC
Q psy3125 79 NVDDR 83 (163)
Q Consensus 79 ~V~~~ 83 (163)
.|...
T Consensus 97 ~V~~~ 101 (103)
T 3qp3_A 97 DVTGG 101 (103)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 77653
No 241
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.41 E-value=1.2e-12 Score=77.64 Aligned_cols=68 Identities=13% Similarity=0.125 Sum_probs=50.6
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+.++.|.|+| ++..+ ..++|+.+.. ..+..+|.|.+++.+|+|.|+|.+.+ ....+.|.|
T Consensus 25 l~C~v~~~~~~v~W~k--~g~~i-------~~~~~~~i~~--~g~~~~L~I~~v~~~D~G~Y~C~a~n---~~~sa~L~V 90 (93)
T 1waa_A 25 FEIELSEPDVHGQWKL--KGQPL-------AASPDCEIIE--DGKKHILILHNCQLGMTGEVSFQAAN---TKSAANLKV 90 (93)
T ss_dssp EEEEESSSSCCCEEEE--TTEEC-------CCBTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEETT---EEEEEEEEE
T ss_pred EEEEECCCCCeEEEEE--CCEEC-------cCCCCEEEEE--ECCEEEEEECCCChhhCEEEEEEECC---CcEEEEEEE
Confidence 6899987558899998 33322 3456777765 23567899999999999999999954 245667777
Q ss_pred Ec
Q psy3125 81 DD 82 (163)
Q Consensus 81 ~~ 82 (163)
.+
T Consensus 91 ~~ 92 (93)
T 1waa_A 91 KE 92 (93)
T ss_dssp EC
T ss_pred Ec
Confidence 64
No 242
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=92.38 Aligned_cols=141 Identities=12% Similarity=0.082 Sum_probs=79.5
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC---eeEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK---MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~---~~~~~ 76 (163)
|.|.+.+. |.|+|. ...+ ..++..... .....+|.|.+++.+|+|.|+|.+.+ .+. ....+
T Consensus 20 L~C~~~~~---v~W~~~--~~~~---------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 84 (289)
T 3mjg_X 20 LTCSGSAP---VVWERM--SQEP---------PQEMAKAQD-GTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRL 84 (289)
T ss_dssp EEEEESSC---CEEEBT--TBCC---------SEEEEECTT-SCEEEEEEECSCCGGGCEEEEEECCC------CCCEEE
T ss_pred EEEeccce---EEEECC--CCCc---------ccceeccCC-CceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeE
Confidence 57888875 999983 2211 123332221 12247899999999999999999954 222 33444
Q ss_pred EEEEEcCCCc----------eEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEE
Q psy3125 77 MLNVDDRGRG----------ARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 77 ~l~V~~~~~~----------~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
.|.|..+... ..+..|..+.+.|... +.+.+.|+..+....+......... +. ...|+|.|+|.
T Consensus 85 ~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p~~~v~w~~~~~~~~~~~~~~~~~~-~~----~~~d~G~Y~C~ 159 (289)
T 3mjg_X 85 YIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPYDHQRG-FS----GIFEDRSYICK 159 (289)
T ss_dssp EEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCTTSCEEEEESSCCSCCCCCEETTTE-EE----ECCCSSEEEEE
T ss_pred EEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCCCCceEEEEeCCCCCccceeecCCcC-ee----eeccCcEEEEE
Confidence 4544433211 3467789999999754 3456777665421111100001111 11 36799999999
Q ss_pred c-CCCC-CccEEEEEEEe
Q psy3125 146 V-NTEP-KMNMAIMLNVD 161 (163)
Q Consensus 146 a-~~~~-~~~~~~~L~V~ 161 (163)
| +..+ ..+..+.|.|.
T Consensus 160 a~n~~~~~~s~~~~l~v~ 177 (289)
T 3mjg_X 160 TTIGDREVDSDAYYVYRL 177 (289)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EEeCCceeeeeeEEEEec
Confidence 9 5543 33444556654
No 243
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.41 E-value=1.3e-11 Score=94.10 Aligned_cols=155 Identities=16% Similarity=0.226 Sum_probs=93.1
Q ss_pred CceEEecCC-----CcEEEEEecCC---ee-EEecc---eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe
Q psy3125 1 MACTVMGLG-----RPVSWMRKRDL---HI-LTTNI---YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 66 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~~---~~-~~~~~---~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~ 66 (163)
|.|.+.+.+ ..|.|+|+..+ .. +.... ..+ ...+||.+..+...++++|.|.+++.+|+|.|.|++
T Consensus 20 L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~ 99 (512)
T 1zvo_C 20 LTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAADTAMYYCAR 99 (512)
T ss_pred EEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCHHHCEEEEEEE
Confidence 689998653 57999986422 11 21111 111 124799988654456799999999999999999999
Q ss_pred eCCC--------------CeeEEEEEEEEcCC---CceE-e-------eCCCeEEEecCCC---Cc-eeEEEEeCCCeEE
Q psy3125 67 NTEP--------------KMNMAIMLNVDDRG---RGAR-L-------SAGPLLNFAFPDL---LT-TNIYTYTGDARFS 117 (163)
Q Consensus 67 ~~~~--------------~~~~~~~l~V~~~~---~~~~-v-------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~ 117 (163)
.... .....+.|.|...+ +.+. . ..+..+.+.|... +. ..+.|+.++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~ 179 (512)
T 1zvo_C 100 GNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQP 179 (512)
T ss_pred ECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCceEEEEEcCcccCc
Confidence 5432 12244567776421 1111 1 1235677888632 22 3688887643211
Q ss_pred Ee--c---C-CC--CceEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 118 VI--H---P-QN--SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 118 ~~--~---~-~~--~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
.. . . .+ .....|.|.....+ +|.|+|.| +..+.....+
T Consensus 180 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 180 QRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred eEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 11 0 0 11 11345899988877 99999999 7666554443
No 244
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.41 E-value=1.7e-12 Score=80.97 Aligned_cols=83 Identities=12% Similarity=0.334 Sum_probs=61.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.| +.|.|++. +..++.........++|+.+... ..+..+|.|.+++.+|+|.|+|.+.+.+.....+.|.
T Consensus 21 L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~a~n~g~~~~~~~l~ 98 (124)
T 3rbg_A 21 LKCVTSLRKNSSLQWLTP-SGFTIFLNEYPVLKNSKYQLLHH-SANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVI 98 (124)
T ss_dssp EEEECCCCTTCEEEEECT-TSCEEEETTEECSCSSCCEEEEE-ETTEEEEEESSCCGGGCEEEEEEEESSSEEEEEEEEE
T ss_pred EEeEEeccCCCEEEEECC-CCeEEEEeccccccCCcEEEEeC-CCCEEEEEECCCChHHCEEEEEEEEcCCCCcEEEEEE
Confidence 689999999 99999963 33333333333345678887642 3457899999999999999999995556677888888
Q ss_pred EEcCCC
Q psy3125 80 VDDRGR 85 (163)
Q Consensus 80 V~~~~~ 85 (163)
|..++.
T Consensus 99 V~~~P~ 104 (124)
T 3rbg_A 99 VLATMK 104 (124)
T ss_dssp EECC--
T ss_pred EEeCCC
Confidence 887754
No 245
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.40 E-value=7.9e-13 Score=82.54 Aligned_cols=75 Identities=13% Similarity=0.175 Sum_probs=54.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccC-----CCCeEEEEEcccCcCCCeeEEEEe-eCCCCee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQ-----NSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 73 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~ 73 (163)
|+|.+.|.| +.|.|+| ++..+ ..+.++.+.... ....++|.|.+++.+|+|.|+|.| |..+...
T Consensus 20 l~c~v~G~P~P~I~W~k--nG~~l-------~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~ 90 (126)
T 1he7_A 20 IPFSVDGQPAPSLRWLF--NGSVL-------NETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 90 (126)
T ss_dssp EEEEECCSSCCEEEEEE--TTEEC-------CCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEEeeeCCCeEEEEE--CCEEC-------CCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEE
Confidence 589999999 9999998 43333 233443322111 112578999999999999999999 5667777
Q ss_pred EEEEEEEEcCC
Q psy3125 74 MAIMLNVDDRG 84 (163)
Q Consensus 74 ~~~~l~V~~~~ 84 (163)
..+.|.|...+
T Consensus 91 ~t~~l~v~~~P 101 (126)
T 1he7_A 91 ASIMAAFMDNP 101 (126)
T ss_dssp EEEEECCCSCT
T ss_pred EEEEEEEEcCC
Confidence 77788877665
No 246
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=1.6e-11 Score=84.45 Aligned_cols=146 Identities=17% Similarity=0.185 Sum_probs=84.9
Q ss_pred CceEEecCC---CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-- 70 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-- 70 (163)
|.|.+.+.+ ..|.|+|...+ ..+........ ..+||.+..+...+.++|.|.+++.+|+|.|.|.+....
T Consensus 21 L~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~ 100 (229)
T 1hxm_A 21 LRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMG 100 (229)
T ss_dssp EEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECCCCS
T ss_pred EEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecCCCc
Confidence 689998654 67999986432 23322222211 257999886434568899999999999999999995431
Q ss_pred -------CeeEEEEEEEEcC-----CCceEeeCCCeEEEecCC---CC-ceeEEEEeCCCeEEEecCC--CCceEEEEec
Q psy3125 71 -------KMNMAIMLNVDDR-----GRGARLSAGPLLNFAFPD---LL-TTNIYTYTGDARFSVIHPQ--NSDEWNMKID 132 (163)
Q Consensus 71 -------~~~~~~~l~V~~~-----~~~~~v~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~ 132 (163)
.....+.|.|... ++.+.+..+ ...+.|.. .+ ...+.|..+ ..+...... ....+.+.+.
T Consensus 101 ~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~~~-~~~L~C~~~g~~P~~i~v~W~~~-~~~~~~~~~~~~~~dg~y~~~ 178 (229)
T 1hxm_A 101 GEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVMKN-GTNVACLVKEFYPKDIRINLVSS-KKITEFDPAIVISPSGKYNAV 178 (229)
T ss_dssp SSCCCCCEEBCCEEEEEECCSCCCBCCEEEEEEE-TTEEEEEEESCBSSCCEEEEECS-SEEEECCCEEEECTTSSEEEE
T ss_pred ccccchhhcCccEEEEEeccCCCCcCCcEEEcCC-CCeEEEEEEEEeCCCEEEEEecC-CEEecCccceEECCCCcEEEE
Confidence 1223457888752 222332221 23566742 12 246788887 543311100 0111224443
Q ss_pred cc-CcCCCeeEEEEc-CC
Q psy3125 133 YA-QKRDAGIYECQV-NT 148 (163)
Q Consensus 133 ~v-~~~D~G~Y~C~a-~~ 148 (163)
.. ..+|.|.|+|.| +.
T Consensus 179 ~~~~~~~~~~ytC~V~h~ 196 (229)
T 1hxm_A 179 KLGKYEDSNSVTCSVQHD 196 (229)
T ss_dssp EEEEETTTTTCEEEEEET
T ss_pred ECcccCCCCcEEEEEEeC
Confidence 33 337899999999 44
No 247
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.39 E-value=1.7e-12 Score=77.38 Aligned_cols=71 Identities=18% Similarity=0.402 Sum_probs=53.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +..+.|+.+... ....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 26 l~C~~~g~p~p~v~W~~--~g~~-------~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (99)
T 3puc_A 26 FAVKATGEPRPTAIWTK--DGKA-------ITQGGKYKLSED--KGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKL 94 (99)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCSSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCEEEEEE--CCEE-------CcCCCCEEEEEe--CCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 579999999 9999998 3322 234567777652 35678999999999999999999 445566677777
Q ss_pred EEEc
Q psy3125 79 NVDD 82 (163)
Q Consensus 79 ~V~~ 82 (163)
.|..
T Consensus 95 ~V~~ 98 (99)
T 3puc_A 95 TIKA 98 (99)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7653
No 248
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=1.8e-12 Score=77.36 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=52.2
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+ ....++.+... ..+..+|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 25 l~C~~~g~p~p~v~W~k--~g~~~-------~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 94 (99)
T 1g1c_A 25 FRVRVVGKPDPECEWYK--NGVKI-------ERSDRIYWYWP-EDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFL 94 (99)
T ss_dssp EEEEEEEESCCEEEEEE--TTEEC-------CCCSSEEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEeCCCEEEEEE--CCEEC-------CCCCCEEEEEc-CCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEE
Confidence 679999999 9999998 33222 23345444321 235778999999999999999999 555666677777
Q ss_pred EEEc
Q psy3125 79 NVDD 82 (163)
Q Consensus 79 ~V~~ 82 (163)
.|..
T Consensus 95 ~V~~ 98 (99)
T 1g1c_A 95 LVQA 98 (99)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7764
No 249
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.39 E-value=1.1e-12 Score=79.43 Aligned_cols=72 Identities=24% Similarity=0.405 Sum_probs=53.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....|+.+.. .....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 33 l~C~~~g~p~p~i~W~~--~~~~-------~~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 101 (107)
T 3irg_B 33 LKCVVLGEPPPVVVWEK--GGQQ-------LAASERLSFPA--DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAV 101 (107)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCCCSSEECCE--ETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeecCCCEEEEEE--CCeE-------CCCCCcEEEEe--CCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEE
Confidence 579999999 9999998 3322 22345666554 234668999999999999999999 445566677778
Q ss_pred EEEcC
Q psy3125 79 NVDDR 83 (163)
Q Consensus 79 ~V~~~ 83 (163)
.|..+
T Consensus 102 ~V~~~ 106 (107)
T 3irg_B 102 TVLEP 106 (107)
T ss_dssp EEEC-
T ss_pred EEEcC
Confidence 87764
No 250
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.39 E-value=2.5e-12 Score=76.60 Aligned_cols=71 Identities=15% Similarity=0.283 Sum_probs=53.0
Q ss_pred CceEEecC-C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEE
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~ 77 (163)
|.|.+.+. | +.|.|+| +.. .+....|+.+.. ..+..+|.|.+++.+|+|.|+|.+. ..+.....+.
T Consensus 21 l~C~~~g~~p~~~v~W~~--~~~-------~~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 89 (97)
T 2bk8_A 21 YVCKIENYDQSTQVTWYF--GVR-------QLENSEKYEITY--EDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAE 89 (97)
T ss_dssp EEEEEESCCTTCEEEEEE--TTE-------ECCSSSSEEEEE--ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEeccCCCCEEEEEE--CCE-------ECcCCCCEEEEE--cCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEE
Confidence 68999997 7 9999998 322 223456777654 2346789999999999999999994 4556666667
Q ss_pred EEEEc
Q psy3125 78 LNVDD 82 (163)
Q Consensus 78 l~V~~ 82 (163)
|.|.+
T Consensus 90 l~V~~ 94 (97)
T 2bk8_A 90 LFVKG 94 (97)
T ss_dssp EEETT
T ss_pred EEEEe
Confidence 77654
No 251
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.38 E-value=1.5e-12 Score=78.62 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=51.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeE--EEecc-CCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARF--SVIHP-QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMA 75 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~--~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~ 75 (163)
|.|.+.|.| +.|.|+| ++..+. .+.++ .+... ......+|.|.+++.+|+|.|+|.+ |..+.....
T Consensus 21 ~~c~v~G~P~P~i~W~k--~g~~l~-------~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 21 IPFTVKGNPKPALQWFY--NGAILN-------ESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp EEEEEECSSCCEEEEEE--TTEEEC-------CCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EEEEEEEeCCCEEEEEE--CCEECC-------CCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 579999999 9999998 433332 22232 11111 1112456999999999999999999 556677777
Q ss_pred EEEEEEcCC
Q psy3125 76 IMLNVDDRG 84 (163)
Q Consensus 76 ~~l~V~~~~ 84 (163)
+.|.|...+
T Consensus 92 ~~l~V~~~P 100 (103)
T 1wwb_X 92 ISAHFMGWP 100 (103)
T ss_dssp EEECCSCCC
T ss_pred EEEEECCCC
Confidence 778776553
No 252
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=3.1e-12 Score=78.98 Aligned_cols=72 Identities=21% Similarity=0.254 Sum_probs=53.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+ ...|+.+.. .....+|.|.+++.+|+|.|+|.+ |..+..+..+.|
T Consensus 44 l~C~~~g~P~p~i~W~k--~g~~l--------~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 111 (118)
T 2e7c_A 44 LVVPFQGKPRPQVVWTK--GGAPL--------DTSRVHVRT--SDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRI 111 (118)
T ss_dssp EEEEEEEESCCEEEEEE--TTEEC--------CCSSCEEEE--CSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEE
T ss_pred EEEEEccCCCCEEEEEE--CCEEC--------CCCcEEEEE--CCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEE
Confidence 679999999 9999998 33222 134555543 234678999999999999999999 445666777888
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|.+.+
T Consensus 112 ~V~~~P 117 (118)
T 2e7c_A 112 RVVEKA 117 (118)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 887653
No 253
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.37 E-value=9e-12 Score=93.93 Aligned_cols=149 Identities=13% Similarity=0.086 Sum_probs=83.4
Q ss_pred CceEEecC-CC---cEEEEEecCCeeEEecceEe-cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCe--e
Q psy3125 1 MACTVMGL-GR---PVSWMRKRDLHILTTNIYTY-TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKM--N 73 (163)
Q Consensus 1 l~C~~~~~-~~---~v~W~k~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~--~ 73 (163)
|.|.+.+. |. .|.|+|.+............ ..+++|.+. ..|.|..+..+|+|.|+|++.+.... .
T Consensus 146 L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~-------s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 218 (475)
T 1iga_A 146 IACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTS-------SQLTLPATQCLAGKSVTCHVKHYTNPSQD 218 (475)
T ss_pred EEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEE-------EEEEechhHcCCCceEEEEEEECCCCcee
Confidence 67999987 33 89998732110000000000 123344332 25899999999999999999543222 2
Q ss_pred EEEEEEEE-------------------------cCCCceEeeCCCeEEEecCCC--Cc---eeEEEEeCCCeEEEe----
Q psy3125 74 MAIMLNVD-------------------------DRGRGARLSAGPLLNFAFPDL--LT---TNIYTYTGDARFSVI---- 119 (163)
Q Consensus 74 ~~~~l~V~-------------------------~~~~~~~v~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~---- 119 (163)
..+.|.|. .++....+..|..+.+.|... .. ..+.| ++......
T Consensus 219 ~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~ 296 (475)
T 1iga_A 219 VTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGP 296 (475)
T ss_pred eeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccC
Confidence 22222220 001111245678888999632 11 46777 33322110
Q ss_pred --cCCC---CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 120 --HPQN---SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 120 --~~~~---~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
.... .....|.|.+++.+|+|.|+|.| |..+.......|
T Consensus 297 ~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v 341 (475)
T 1iga_A 297 PERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATL 341 (475)
T ss_pred ceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEe
Confidence 0001 13456999999999999999999 776665444444
No 254
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.37 E-value=5e-12 Score=85.41 Aligned_cols=141 Identities=10% Similarity=0.113 Sum_probs=80.1
Q ss_pred CceEEecC---C--CcEEEEEecCCeeEEecc--eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-e
Q psy3125 1 MACTVMGL---G--RPVSWMRKRDLHILTTNI--YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK-M 72 (163)
Q Consensus 1 l~C~~~~~---~--~~v~W~k~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-~ 72 (163)
|.|.+.+. | ..|.|+|.+ ..+..... .....+++|.. ..+|.|.+++.+|+|.|+|++.+... .
T Consensus 23 L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~-------~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 23 VTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTKPREEQFNSTFRS-------VSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp EEEEEEEECTTCCCCEEEEEETT-EEECCCEEECCCEETTTEEEE-------EEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred EEEEEeCcccCCCceEEEEEECC-ccccccccCCCcCcCCCcEEE-------EEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 68999977 3 489999843 22221000 00011233322 34699999999999999999965322 1
Q ss_pred --eEEEEE--EEEcCCCceEee-------CCCeEEEecCCC---Cc-eeEEEEeCCCeEEEec------CCCC---ceEE
Q psy3125 73 --NMAIML--NVDDRGRGARLS-------AGPLLNFAFPDL---LT-TNIYTYTGDARFSVIH------PQNS---DEWN 128 (163)
Q Consensus 73 --~~~~~l--~V~~~~~~~~v~-------~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~------~~~~---~~~~ 128 (163)
...+.+ .+..++ .+.+. .|..+.+.|... +. ..+.|++++..+.... ...+ ....
T Consensus 95 ~~~~~v~~~~~~~~~P-~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~ 173 (207)
T 2vol_A 95 PIEKTISKTKGRPKAP-QVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSK 173 (207)
T ss_dssp CEEEEECCCCCCCBCC-EEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEE
T ss_pred ceEEEeccCCCCCcCC-eEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEE
Confidence 122222 222222 12111 367788999642 22 4788998766321100 1111 1234
Q ss_pred EEecccCcCCCeeEEEEc-CCCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
|.|.....+|.|.|+|.| |...
T Consensus 174 l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 174 LNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEECHHHcCCCCEEEEEEECCCC
Confidence 777777778999999999 6543
No 255
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=2e-12 Score=82.37 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=53.4
Q ss_pred CceEEecCC-CcEEEEEecCCe-------------------eEEecceEe-cCCCeEEEeccCCCCeEEEEEcccCcCCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH-------------------ILTTNIYTY-TGDARFSVIHPQNSDEWNMKIDYAQKRDA 59 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~-------------------~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~i~~v~~~D~ 59 (163)
|.|.+.|.| |.|.|+|.+... ....+...+ ....|+.+... ....+|.|.+++.+|+
T Consensus 38 L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~--~~~s~L~I~~v~~~Ds 115 (139)
T 1gxe_A 38 LDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETT--KDRSIFTVEGAEKEDE 115 (139)
T ss_dssp CEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEE--TTEEEEECSCCCTTTC
T ss_pred EEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeC--CCEEEEEECCCCcccC
Confidence 789999999 999999854100 000000111 23456666542 2457899999999999
Q ss_pred eeEEEEe-eCCCCeeEEEEEEEE
Q psy3125 60 GIYECQV-NTEPKMNMAIMLNVD 81 (163)
Q Consensus 60 G~Y~C~~-~~~~~~~~~~~l~V~ 81 (163)
|.|+|.+ |..+.....+.|.|.
T Consensus 116 G~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 116 GVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999 556666677777764
No 256
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.36 E-value=4.3e-12 Score=78.26 Aligned_cols=76 Identities=21% Similarity=0.379 Sum_probs=56.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ....|+.+... ..+..+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 35 L~C~~~g~p~p~v~W~k--~~~~~~------~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 105 (116)
T 2kkq_A 35 LECQISAIPPPKLFWKR--NNEMVQ------FNTDRISLYQD-NTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRL 105 (116)
T ss_dssp EEEEBCCBSCCEEEEEE--TTEECC------CCBTTEEEEEC-TTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCEEEEEE--CCEECc------CCCCeEEEEeC-CCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEE
Confidence 679999999 9999998 332221 12467777653 234568999999999999999999 556666778888
Q ss_pred EEEcCCC
Q psy3125 79 NVDDRGR 85 (163)
Q Consensus 79 ~V~~~~~ 85 (163)
.|..++.
T Consensus 106 ~V~~~p~ 112 (116)
T 2kkq_A 106 DVTARPN 112 (116)
T ss_dssp EEECCSC
T ss_pred EEeCCCC
Confidence 8887653
No 257
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=77.45 Aligned_cols=65 Identities=18% Similarity=0.340 Sum_probs=46.5
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.++.|.|+| ++..+ ..+.++.+..+ .+..+|.|.+++.+|+|.|+|.+.+. +..+.|.
T Consensus 26 l~C~v~~p~~~v~W~k--~g~~i-------~~~~~~~i~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n~---~~~~~lt 90 (91)
T 2lvc_A 26 LACEVDREDAPVRWYK--DGQEV-------EESDFVVLENE--GPHRRLVLPATQPSDGGEFQCVAGDE---CAYFTVT 90 (91)
T ss_dssp EEEECSCTTSCCEEEE--TTSCC-------CCCSSCEEEEE--TTEEEEEESSCCGGGCSEEEEECSSC---EEEEEEE
T ss_pred EEEEECCCCcEEEEEE--CCEEe-------eeeeeeeEEec--CCeEEEEeCCCChhhcEEEEEEEcce---EEEEEEE
Confidence 6899977338999998 33222 34567777653 45778999999999999999999442 3444444
No 258
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=2.6e-12 Score=79.33 Aligned_cols=76 Identities=20% Similarity=0.339 Sum_probs=52.6
Q ss_pred CceEEecC---C-CcEEEEEecCCee-EEecceEecCCCeEEEecc----CCCCeEEEEEcccCcCCCeeEEEEe-eCCC
Q psy3125 1 MACTVMGL---G-RPVSWMRKRDLHI-LTTNIYTYTGDARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQV-NTEP 70 (163)
Q Consensus 1 l~C~~~~~---~-~~v~W~k~~~~~~-~~~~~~~~~~~~r~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~ 70 (163)
|.|.+.+. | +.|.|+| +..+ +..+ ...++.+... ....+.+|.|.++..+|+|.|+|++ +..+
T Consensus 32 L~C~v~g~~~~p~P~V~W~K--gk~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g 104 (118)
T 2edn_A 32 VVAKVNGKELPDKPTIKWFK--GKWLELGSK-----SGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDT 104 (118)
T ss_dssp CCEEEETTTSSSCCCCEEEE--TTTCCCCCS-----TTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSC
T ss_pred EEEEEeccCCCCCCcEEEee--CCEeccCCC-----CccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCC
Confidence 78999985 6 9999999 3211 1100 1234444321 0112688999999999999999999 5566
Q ss_pred CeeEEEEEEEEcC
Q psy3125 71 KMNMAIMLNVDDR 83 (163)
Q Consensus 71 ~~~~~~~l~V~~~ 83 (163)
..+..++|.|.++
T Consensus 105 ~~s~~~~L~V~~~ 117 (118)
T 2edn_A 105 CDSCGFNIDVEAP 117 (118)
T ss_dssp EEEEEECCEEECC
T ss_pred cEEEEEEEEEEcC
Confidence 7788888998875
No 259
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.35 E-value=3.4e-12 Score=79.70 Aligned_cols=78 Identities=17% Similarity=0.291 Sum_probs=52.8
Q ss_pred CceEEecC---C-CcEEEEEecCCeeEEecceEecCCCeEEEecc----CCCCeEEEEEcccCcCCCeeEEEEe-eCCCC
Q psy3125 1 MACTVMGL---G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQV-NTEPK 71 (163)
Q Consensus 1 l~C~~~~~---~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~ 71 (163)
|.|.+.+. | +.|.|+| +..+.... ....++.+... ....+.+|+|.+++.+|+|.|+|++ +..+.
T Consensus 27 L~C~v~g~~~~p~P~V~W~K--gk~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~ 100 (126)
T 2dav_A 27 FIAKVKAEDLLRKPTIKWFK--GKWMDLAS----KAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKF 100 (126)
T ss_dssp EEEEEECCCSSSCCEEEEEE--SSSCCHHH----HTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCE
T ss_pred EEEEEeccCCCCCCcEEEee--CcCcccCC----CCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCc
Confidence 68999875 6 9999999 32111000 01234444311 0112688999999999999999999 44566
Q ss_pred eeEEEEEEEEc-CC
Q psy3125 72 MNMAIMLNVDD-RG 84 (163)
Q Consensus 72 ~~~~~~l~V~~-~~ 84 (163)
.+..++|.|.+ ++
T Consensus 101 ~~~~~~L~V~~~~~ 114 (126)
T 2dav_A 101 DSCSFDLEVHESTG 114 (126)
T ss_dssp EEECCEEEEECCCC
T ss_pred EEEEEEEEEEecCC
Confidence 77888999998 53
No 260
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.34 E-value=4.3e-12 Score=75.71 Aligned_cols=72 Identities=26% Similarity=0.402 Sum_probs=51.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ....++.... .....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 25 l~C~~~g~p~p~v~W~k--~~~~~~------~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l 94 (99)
T 1u2h_A 25 MSIRVQGEPKPVVSWLR--NRQPVR------PDQRRFAEEA--EGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARL 94 (99)
T ss_dssp EEEEEEEESCCEEEEEE--TTEECC------CBTTEEEEEC--GGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEcCCCEEEEEE--CCEECC------CCCCEEEEEC--CCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEE
Confidence 689999999 9999998 332221 1234555543 234568999999999999999999 445566677777
Q ss_pred EEEc
Q psy3125 79 NVDD 82 (163)
Q Consensus 79 ~V~~ 82 (163)
.|.+
T Consensus 95 ~V~~ 98 (99)
T 1u2h_A 95 EVRG 98 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7764
No 261
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=3.5e-12 Score=76.31 Aligned_cols=70 Identities=19% Similarity=0.444 Sum_probs=51.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ..+.|+.+.. +.+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 28 l~C~~~g~p~p~v~W~~--~~~~~~------~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (100)
T 2edj_A 28 LKCKATGDPLPVISWLK--EGFTFP------GRDPRATIQE-----QGTLQIKNLRISDTGTYTCVATSSSGETSWSAVL 94 (100)
T ss_dssp ECCEEECSSCCEEEEEE--SSSEES------SSCSSCEECT-----TCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEE
T ss_pred EEEEEEEcCCCEEEEEE--CCEECC------CCCCCEEEcC-----CCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEE
Confidence 689999999 9999998 322221 1345665543 336999999999999999999 445666778888
Q ss_pred EEEcC
Q psy3125 79 NVDDR 83 (163)
Q Consensus 79 ~V~~~ 83 (163)
.|.++
T Consensus 95 ~V~~~ 99 (100)
T 2edj_A 95 DVTES 99 (100)
T ss_dssp EEESC
T ss_pred EEecC
Confidence 88765
No 262
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.34 E-value=4.8e-12 Score=75.64 Aligned_cols=73 Identities=23% Similarity=0.390 Sum_probs=50.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ...+..+... ..+..+|.|.+++.+|+|.|+|.+ +..+..+..+.|
T Consensus 25 l~C~~~g~p~p~v~W~~--~g~~~~-------~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 94 (100)
T 2kdg_A 25 MDFKVSGLPAPDVSWYL--NGRTVQ-------SDDLHKMIVS-EKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQL 94 (100)
T ss_dssp EEEECEEESCCEEEEEE--TTEEEC-------CCSSSCEEEE-TTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeeCCCEEEEEE--CCEECc-------CCCcEEEEEc-CCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEE
Confidence 679999999 9999998 333322 2222211111 224578999999999999999999 455666777788
Q ss_pred EEEcC
Q psy3125 79 NVDDR 83 (163)
Q Consensus 79 ~V~~~ 83 (163)
.|...
T Consensus 95 ~V~~~ 99 (100)
T 2kdg_A 95 DVLAK 99 (100)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 87654
No 263
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.33 E-value=2.2e-12 Score=78.34 Aligned_cols=70 Identities=26% Similarity=0.434 Sum_probs=52.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....|+.+.. .....+|.|.+++.+|+|.|+|.+ +..+..+..+.|
T Consensus 34 L~C~~~g~p~p~v~W~k--~g~~-------l~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 102 (106)
T 1nct_A 34 FSCDTDGEPVPTVTWLR--KGQV-------LSTSARHQVTT--TKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTL 102 (106)
T ss_dssp CCEEEECSSCCBCCBCS--SSSC-------CTTCSSEEEEE--CSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEE
T ss_pred EEEEEEEcCCCEEEEEE--CCEE-------CCCCCCEEEEE--CCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEE
Confidence 689999999 9999998 2221 22456777765 235788999999999999999999 445566677777
Q ss_pred EEE
Q psy3125 79 NVD 81 (163)
Q Consensus 79 ~V~ 81 (163)
.|.
T Consensus 103 ~V~ 105 (106)
T 1nct_A 103 TIQ 105 (106)
T ss_dssp EEC
T ss_pred EEE
Confidence 764
No 264
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.33 E-value=2.8e-12 Score=77.70 Aligned_cols=72 Identities=19% Similarity=0.424 Sum_probs=46.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+|. +..+ ..+.++.+.. .+.+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 30 l~C~~~g~p~p~i~W~~~--~~~~-------~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 96 (108)
T 3kvq_A 30 VSCTASGNPPPQIMWFKD--NETL-------VEDSGIVLKD----GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFF 96 (108)
T ss_dssp EECBCC----CCEEEEES--SSBC-------CCBTTEEEET----TTTEEEECSCCGGGCEEEEEEEC----CEEEEEEE
T ss_pred EEEECcCcCCCeEEEEEC--CeEc-------ccCCCeEEeC----CCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEE
Confidence 579999999 99999983 2211 2234444442 3467999999999999999999 445677778888
Q ss_pred EEEcCCC
Q psy3125 79 NVDDRGR 85 (163)
Q Consensus 79 ~V~~~~~ 85 (163)
.|..++.
T Consensus 97 ~V~~~~~ 103 (108)
T 3kvq_A 97 IIEGAQE 103 (108)
T ss_dssp EEEC---
T ss_pred EEeCCCc
Confidence 8887654
No 265
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=4e-12 Score=77.44 Aligned_cols=75 Identities=15% Similarity=0.293 Sum_probs=55.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| +...+. ....|+.+... .....+|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 28 l~C~~~g~p~p~v~W~k--~g~~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 98 (110)
T 2dm2_A 28 FTCRVAGNPKPKIYWFK--DGKQIS------PKSDHYTIQRD-LDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRL 98 (110)
T ss_dssp EEEEBCCSSCCEEEEEC--SSCBCC------TTCSSEEEEEC-TTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCE
T ss_pred EEEEEEecCCCEEEEEE--CCEECC------CCCCeEEEEEC-CCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 689999999 9999998 322221 12457776653 234568999999999999999999 445667777788
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|...+
T Consensus 99 ~V~~~~ 104 (110)
T 2dm2_A 99 MVQAVN 104 (110)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 888764
No 266
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.32 E-value=8.6e-12 Score=74.35 Aligned_cols=72 Identities=21% Similarity=0.355 Sum_probs=53.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+.. ....|+.+... ....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 25 l~C~~~g~p~p~v~W~~--~~~~~~~-----~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 95 (100)
T 3irg_A 25 VACAFTGEPTPEVTWSC--GGRKIHS-----QEQGRFHIENT--DDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNI 95 (100)
T ss_dssp EEEEEEEESCCEEEEEE--TTEECCT-----TGGGTEEEEEC--SSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEcCCCceEEEE--CCEEeec-----CCCCEEEEEec--CCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEE
Confidence 579999999 9999998 3322211 12457777652 34688999999999999999999 445556666677
Q ss_pred EEE
Q psy3125 79 NVD 81 (163)
Q Consensus 79 ~V~ 81 (163)
.|.
T Consensus 96 ~V~ 98 (100)
T 3irg_A 96 HIR 98 (100)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 267
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.31 E-value=1.2e-11 Score=79.99 Aligned_cols=74 Identities=20% Similarity=0.350 Sum_probs=56.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....|+.+... .....+|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 61 L~C~~~g~P~p~v~W~k--~g~~-------~~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 130 (154)
T 1fhg_A 61 FDCKVEGYPDPEVMWFK--DDNP-------VKESRHFQIDYD-EEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAEL 130 (154)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCCSSSEEEEEC-TTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEecCCEEEEEE--CCEE-------CCCCCcEEEEEC-CCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEE
Confidence 689999999 9999998 3322 234567776642 234678999999999999999999 555666777888
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|..++
T Consensus 131 ~V~~~p 136 (154)
T 1fhg_A 131 LVETMG 136 (154)
T ss_dssp EEECC-
T ss_pred EEeCcC
Confidence 888764
No 268
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.31 E-value=3.6e-12 Score=86.83 Aligned_cols=141 Identities=9% Similarity=0.135 Sum_probs=79.4
Q ss_pred CceEEecC---C--CcEEEEEecCCeeEEec--ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-Ce
Q psy3125 1 MACTVMGL---G--RPVSWMRKRDLHILTTN--IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-KM 72 (163)
Q Consensus 1 l~C~~~~~---~--~~v~W~k~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~~ 72 (163)
|.|.+.+. + +.|.|+|.+ ..+.... ......+++|.. ..+|.|.+++.+|+|.|+|++.+.. ..
T Consensus 31 L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~-------~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 31 VTCVVVDVSEDDPDVQISWFVNN-VEVHTAQTQTHREDYNSTIRV-------VSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp EEEEEEEECTTSCCEEEEEEETT-EEECCCEEEEEEETTTTEEEE-------EEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred EEEEEcCCccCCCceEEEEEECC-ccccCcccccccccCCCeEEE-------EEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 67999976 3 689999833 2221100 001112233332 3469999999999999999995432 22
Q ss_pred --eEEEEE--EEEcCCCceEe-------eCCCeEEEecCCC---Cc-eeEEEEeCCCeEEEec------CCCC---ceEE
Q psy3125 73 --NMAIML--NVDDRGRGARL-------SAGPLLNFAFPDL---LT-TNIYTYTGDARFSVIH------PQNS---DEWN 128 (163)
Q Consensus 73 --~~~~~l--~V~~~~~~~~v-------~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~------~~~~---~~~~ 128 (163)
...+.+ .+..++ .+.+ ..|..+.+.|... +. ..+.|++++..+.... ...+ ....
T Consensus 103 ~~~~~v~~~~~~~~~P-~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~ 181 (218)
T 2rgs_A 103 PIERTISKIKGLVRAP-QVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSK 181 (218)
T ss_dssp CEEEEECCCCCCCBCC-EEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEE
T ss_pred cceEEEeecCCCCCCC-EEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEE
Confidence 122111 122221 1211 1367788999642 23 3789998876432110 1111 1234
Q ss_pred EEecccCcCCCeeEEEEc-CCCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
|.|.....+|+|.|+|.| |...
T Consensus 182 l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 182 LNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp EEEEHHHHHHCSCEEEEEECTTS
T ss_pred EEECHHHcCCCCeEEEEEEcCCC
Confidence 667766667899999999 6543
No 269
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.31 E-value=6.9e-12 Score=74.10 Aligned_cols=69 Identities=16% Similarity=0.202 Sum_probs=47.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.|.| +.|.|+|.+....+. .+.++. . .....+|.|.+++.+|+|.|+|.+ |..+..+..+.|
T Consensus 22 l~C~~~g~P~p~i~W~k~~~~~~~~-------~~~~~~--~--~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l 90 (93)
T 1wit_A 22 LEVDFIGAPDPTATWTVGDSGAALA-------PELLVD--A--KSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEV 90 (93)
T ss_dssp EEEEEECCSSCEEEEECSTTTCBCS-------TTSEEE--E--ETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEcCCCEEEEEECCCCcccC-------CcEEEE--e--cCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEE
Confidence 679999999 999999832112221 111222 1 124678999999999999999999 555556666666
Q ss_pred EE
Q psy3125 79 NV 80 (163)
Q Consensus 79 ~V 80 (163)
.|
T Consensus 91 ~V 92 (93)
T 1wit_A 91 IV 92 (93)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 270
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.31 E-value=1.4e-11 Score=74.16 Aligned_cols=70 Identities=20% Similarity=0.293 Sum_probs=51.8
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCC--eEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDA--RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.++.|.|+| ++..+ ..+. ||.+... ....+|.|.+++.+|+|.|+|.+.+ .+..+.|
T Consensus 27 l~C~~~~~~~~v~W~k--~g~~l-------~~~~~~~~~~~~~--~~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~~~l 92 (103)
T 1x44_A 27 LECEVSEDDANVKWFK--NGEEI-------IPGPKSRYRIRVE--GKKHILIIEGATKADAAEYSVMTTG---GQSSAKL 92 (103)
T ss_dssp EEEECSSSSCCCEEEE--TTEEC-------CCSTTCSEEEEEE--TTEEEEEEEEECTTTCSEEEEEETT---EEEEEEE
T ss_pred EEEEecCCCCeEEEEE--CCEEC-------CCCCceEEEEEEc--CCEEEEEECCCCcccCEEEEEEECC---CcEEEEE
Confidence 6799988339999998 33222 2333 6677652 3467899999999999999999965 4667778
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|..++
T Consensus 93 ~V~~~p 98 (103)
T 1x44_A 93 SVDLKS 98 (103)
T ss_dssp EEECCC
T ss_pred EEeCCC
Confidence 887764
No 271
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.2e-11 Score=74.51 Aligned_cols=69 Identities=16% Similarity=0.352 Sum_probs=50.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.+ + |.|+| ++.. +....++.+.. .....+|.|.+++.+|+|.|+|.+.+. ...+.|.
T Consensus 30 l~C~~~~~p~~-v~W~k--~g~~-------~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n~---~~~~~l~ 94 (104)
T 2e6p_A 30 LTCELSRVDFP-ATWYK--DGQK-------VEESELLVVKM--DGRKHRLILPEAKVQDSGEFECRTEGV---SAFFGVT 94 (104)
T ss_dssp CCEECSSTTCC-CEEEE--TTEE-------CCCBTTBEEEE--ETTEEEEEESSCCTTTCEEEEEECSSC---CCCEEEE
T ss_pred EEEEecCCCCc-cEEee--CCEE-------CCCCCCEEEEe--CCCEEEEEECCCChhhCEEEEEEECCc---eEEEEEE
Confidence 689999999 7 99998 3322 22345666654 234678999999999999999999654 3366777
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|.+++
T Consensus 95 V~~~P 99 (104)
T 2e6p_A 95 VQDPS 99 (104)
T ss_dssp EECCC
T ss_pred EcCCC
Confidence 77664
No 272
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.30 E-value=1.2e-11 Score=75.71 Aligned_cols=83 Identities=16% Similarity=0.239 Sum_probs=57.2
Q ss_pred CceEEecCC--CcEEEEEecCC---e-eEEec-ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CCe
Q psy3125 1 MACTVMGLG--RPVSWMRKRDL---H-ILTTN-IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PKM 72 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~---~-~~~~~-~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~~ 72 (163)
|.|.+.+.. ..|.|+|.+.. . ++... .......+|+.+......+.++|.|.+++.+|+|.|.|.+... ...
T Consensus 21 L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~~~~ 100 (113)
T 1zox_A 21 VQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDP 100 (113)
T ss_dssp EEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCSSSCC
T ss_pred EEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcCCCCc
Confidence 579998754 56999996432 1 22211 1111235788887544567899999999999999999999543 345
Q ss_pred eEEEEEEEEcC
Q psy3125 73 NMAIMLNVDDR 83 (163)
Q Consensus 73 ~~~~~l~V~~~ 83 (163)
...+.|.|..+
T Consensus 101 ~~~v~L~V~~~ 111 (113)
T 1zox_A 101 MFKVTVNIGPV 111 (113)
T ss_dssp EEEEEEEEECC
T ss_pred cEEEEEEEEcC
Confidence 67778888765
No 273
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.30 E-value=1.2e-11 Score=74.04 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=51.2
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+. .| +.|.|+| ++.. +..+.|+.+.. .....+|.|.+++.+|+|.|+|.+ +.....+.|.
T Consensus 28 l~C~~~-~p~~~v~W~k--~g~~-------i~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a---g~~~~~~~l~ 92 (100)
T 2yuv_A 28 FVVELA-DPKLEVKWYK--NGQE-------IRPSTKYIFEH--KGCQRILFINNCQMTDDSEYYVTA---GDEKCSTELF 92 (100)
T ss_dssp EEEEES-CTTSCEEEEE--SSCB-------CCCBTTEEEEE--ETTEEEEEEEEECTTTCCEEEEEE---TTEEEEEEEE
T ss_pred EEEEec-CCCceEEEEE--CCEE-------CCCCCCEEEEe--cCCEEEEEEcCCCcCcCEEEEEEE---CCceEEEEEE
Confidence 679998 57 9999998 2222 22345777764 234678999999999999999999 4456677788
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|.+++
T Consensus 93 V~~~P 97 (100)
T 2yuv_A 93 VRSGP 97 (100)
T ss_dssp ECCSC
T ss_pred EecCC
Confidence 87664
No 274
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.30 E-value=9.9e-12 Score=85.43 Aligned_cols=141 Identities=11% Similarity=0.135 Sum_probs=81.0
Q ss_pred CceEEecC-C--C-cEEEEEecCCeeEEecc--eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeE
Q psy3125 1 MACTVMGL-G--R-PVSWMRKRDLHILTTNI--YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNM 74 (163)
Q Consensus 1 l~C~~~~~-~--~-~v~W~k~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~ 74 (163)
|.|.+.+. | + .|.|+| ++..++.... .....+++|.. ..+|.|.+++.+|+|.|+|++.+... ..
T Consensus 33 L~C~~~g~~P~~p~~v~W~~-~g~~~~~~~~~~~~~~~~g~~~~-------~s~L~I~~~~~~D~g~Y~C~~~~~~~-~~ 103 (231)
T 2w59_A 33 LRCLVVNLPSDSSLSVTWTR-EKSGNLRPDPMVLQEHFNGTYSA-------SSAVPVSTQDWLSGERFTCTVQHEEL-PL 103 (231)
T ss_dssp EEEEEEEESCCTTCEEEEEC-SSSSCCCCCCCEEEECTTSCEEE-------EEEEECCHHHHHTTCCEEEEEECTTC-SS
T ss_pred EEEEEeCccCCCCeEEEEEc-CCeeccccccccceECCCCcEEE-------EEEEEecchhccCCCEEEEEEEcCCC-CC
Confidence 67999984 4 3 899996 3332211111 01112334431 34699999999999999999965321 12
Q ss_pred EEEEEEEc-----CCCceEee-------CCCeEEEecCCC----CceeEEEEeCCCeEEE--------ecC--------C
Q psy3125 75 AIMLNVDD-----RGRGARLS-------AGPLLNFAFPDL----LTTNIYTYTGDARFSV--------IHP--------Q 122 (163)
Q Consensus 75 ~~~l~V~~-----~~~~~~v~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--------~~~--------~ 122 (163)
.+.+.|.. .++.+.+. .+..+.+.|... ....+.|++++..+.. ... .
T Consensus 104 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (231)
T 2w59_A 104 PLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGG 183 (231)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---
T ss_pred ceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCC
Confidence 22333321 11122221 124578888642 2357899988654311 011 1
Q ss_pred C-C---ceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 123 N-S---DEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 123 ~-~---~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
. . ..+.|.|.....+|+|.|+|.| +...
T Consensus 184 d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 184 DGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 1 1 1256889999999999999999 6544
No 275
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-11 Score=73.52 Aligned_cols=66 Identities=12% Similarity=0.218 Sum_probs=48.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+ +.+ +.|.|+| ++..+ ....|+.+.. .....+|.|.+++.+|+|.|+|.+ +.....+.|.
T Consensus 28 l~C~~-~~p~~~v~W~k--~~~~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a---g~~~~~~~l~ 92 (95)
T 2k1m_A 28 FEAET-ERAGVKVRWQR--GGSDI-------SASNKYGLAT--EGTRHTLTVREVGPADQGSYAVIA---GSSKVKFDLK 92 (95)
T ss_dssp EEEEC-SSSSCCCEEEC--SSSEE-------CSSTTCEEEE--ETTEEEEEESSCCTTCCSEEEEEE---TTEEEEEEEE
T ss_pred EEEEe-CCCCCeEEEEE--CCEEC-------CCCCcEEEEE--cCCEEEEEEcCCCcccCEEEEEEE---CCceEEEEEE
Confidence 67999 667 9999998 32222 2455777664 234678999999999999999999 3345566777
Q ss_pred EE
Q psy3125 80 VD 81 (163)
Q Consensus 80 V~ 81 (163)
|.
T Consensus 93 V~ 94 (95)
T 2k1m_A 93 VI 94 (95)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 276
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.30 E-value=1.2e-10 Score=80.01 Aligned_cols=143 Identities=16% Similarity=0.285 Sum_probs=87.2
Q ss_pred CceEEecCC-CcEEEEEecC---CeeEEecceEecC--CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC-e
Q psy3125 1 MACTVMGLG-RPVSWMRKRD---LHILTTNIYTYTG--DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK-M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~---~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~-~ 72 (163)
|.|.....- .-+.|+++.. +.++......... -.||.... ...+++|.|.+++.+|++.|.|+... .+. +
T Consensus 21 isC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~--Sgt~ftLtIs~lq~eD~A~YyC~~~~~~~~tF 98 (259)
T 4f9l_D 21 ITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSG--SATGFTLTISSLQPEDIATYYCQQGHSYPYTF 98 (259)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEEESCCGGGCEEEEEEECSSSSCCB
T ss_pred EEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeec--cCCeEEEEEcccChhhCEEEEEeecCCCCCCc
Confidence 578876554 5689998643 2333322222211 24887664 34689999999999999999998732 110 0
Q ss_pred eEEEEEE-----------------------------EEcCCCceEeeCCCeEEEecCC----CCceeEEEEeC-------
Q psy3125 73 NMAIMLN-----------------------------VDDRGRGARLSAGPLLNFAFPD----LLTTNIYTYTG------- 112 (163)
Q Consensus 73 ~~~~~l~-----------------------------V~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~------- 112 (163)
-.-+.|+ +++.+. -.+.+|..+.+.|.. ...-.+.|++.
T Consensus 99 G~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~-~lvkPG~Sl~LSC~aSG~tfs~y~~~WvRQaPGkgLE 177 (259)
T 4f9l_D 99 GGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGA-ELVKPGASVKLSCKASGYTFTRYYLYWVKQRPGQGLE 177 (259)
T ss_dssp CCCCEECBCCC----------------------CCCEEEECC-CEEESSSCEEEEEEEESSCGGGSCEEEEEECTTSCEE
T ss_pred cCCeEEEEeccccCccccccccccccccCCccccceEEeECC-CEECCCCcEEEEEeeeCCCcccCcEEEEEECCCCceE
Confidence 0001111 111121 245677788888842 11122333321
Q ss_pred ------------------CCeEEEecCCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 113 ------------------DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 113 ------------------~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
..||.+......+...|++.+++.+|+..|+|..
T Consensus 178 wvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr 229 (259)
T 4f9l_D 178 WIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSR 229 (259)
T ss_dssp EEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEE
Confidence 2377777766677889999999999999999975
No 277
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=8.8e-12 Score=75.00 Aligned_cols=70 Identities=24% Similarity=0.521 Sum_probs=51.9
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+.++.|.|+| ++.. +..+.|+.+... ....+|.|.+++.+|+|.|+|.+.+ ....+.|.|
T Consensus 28 l~C~~~~~~~~v~W~k--~g~~-------~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~l~V 93 (103)
T 2edf_A 28 LRCELSRAGTPVHWLK--DRKA-------IRKSQKYDVVCE--GTMAMLVIRGASLKDAGEYTCEVEA---SKSTASLHV 93 (103)
T ss_dssp ECCEESSSSCCCCEEE--SSCB-------CCCSSSEEEEEE--TTEEEEEESSCCTTTCSEEEEECSS---CEEEEEEEE
T ss_pred EEEEEeCCCCcEEEEE--CCEE-------ccCCCCEEEEEC--CCEEEEEECCCCcccCEEEEEEEcc---CCcEEEEEE
Confidence 6899998338999998 3222 223457777652 3477899999999999999999965 366777888
Q ss_pred EcCC
Q psy3125 81 DDRG 84 (163)
Q Consensus 81 ~~~~ 84 (163)
..++
T Consensus 94 ~~~p 97 (103)
T 2edf_A 94 EEKA 97 (103)
T ss_dssp CCCS
T ss_pred eCCC
Confidence 7664
No 278
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.29 E-value=4.2e-13 Score=100.02 Aligned_cols=143 Identities=8% Similarity=0.046 Sum_probs=83.3
Q ss_pred CceEEecC-C-C-cEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEE
Q psy3125 1 MACTVMGL-G-R-PVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~-~-~-~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~ 76 (163)
|.|.+.+. | + .|.|+|.+.......... ....++|... .+|.|.+++.+| |.|+|.+.+ .+......
T Consensus 139 L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~-~~~~~~~~~~-------s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~ 209 (434)
T 1igy_B 139 LGCLVKGYFPEPVTVTWNSGSLSSGVHTFPA-VLQSDLYTLS-------SSVTVPSSPRPS-ETVTCNVAHPASSTKVDK 209 (434)
T ss_dssp EEEEEEEEBSSCCEEEETTTTBCSSEEECCC-EECSSCEEEE-------EEEEEETTTTTS-SCCEEEEECTTTTCCEEE
T ss_pred EEEEEeeecCCCeEEEEeeCCcCCCeEecCc-eecCCcEEEE-------EEEEEcchhcCC-CcEEEEEEeCCCCcccee
Confidence 57999986 6 5 999987321100100000 1111333322 359999999999 999999954 33322222
Q ss_pred EEEEE------------------cCCCceE--eeCCCeEEEecCCCC------ceeEEEEeCCCeEEEec------CC--
Q psy3125 77 MLNVD------------------DRGRGAR--LSAGPLLNFAFPDLL------TTNIYTYTGDARFSVIH------PQ-- 122 (163)
Q Consensus 77 ~l~V~------------------~~~~~~~--v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~-- 122 (163)
.+.+. ..++... +..|..+.+.|.... ...+.|++++..+.... ..
T Consensus 210 ~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~ 289 (434)
T 1igy_B 210 KIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNS 289 (434)
T ss_dssp ECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSS
T ss_pred eccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCC
Confidence 22111 1111112 567888999996321 24688988876432110 00
Q ss_pred -CCceEEEEecccCcCCCeeEEEEc-CCCCCc
Q psy3125 123 -NSDEWNMKIDYAQKRDAGIYECQV-NTEPKM 152 (163)
Q Consensus 123 -~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~ 152 (163)
......|.|.+++.+|+|.|+|.| |..+..
T Consensus 290 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 290 TFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp SCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred cEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 012346999999999999999999 766543
No 279
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.29 E-value=7.9e-12 Score=75.09 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=60.8
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCe--------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR--------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
.+....+..|..+.+.|.. .+.+.+.|++++.. +.+.. ......|.|.+++.+|+|.|+|.| |..|.
T Consensus 11 ~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~ 88 (100)
T 3knb_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN--TDDLTTLIIMDVQKQDGGLYTLSLGNEFGS 88 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE--CSSEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeec--ccceEEEEEcCCCccCCEEEEEEEEECCCE
Confidence 3445677888999999963 45568899987653 33322 234567999999999999999999 99999
Q ss_pred ccEEEEEEEec
Q psy3125 152 MNMAIMLNVDG 162 (163)
Q Consensus 152 ~~~~~~L~V~~ 162 (163)
.+..+.|.|++
T Consensus 89 ~~~~~~l~V~~ 99 (100)
T 3knb_A 89 DSATVNIHIRS 99 (100)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEEE
Confidence 99999999975
No 280
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=4.6e-12 Score=77.07 Aligned_cols=75 Identities=24% Similarity=0.430 Sum_probs=53.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+|. +..+. ...++.+... ..+..+|.|.+++.+|+|.|+|.+. ..+..+..+.|
T Consensus 29 l~C~~~g~p~p~v~W~~~-g~~~~--------~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 98 (110)
T 2dm3_A 29 MDCKVSGLPTPDLSWQLD-GKPVR--------PDSAHKMLVR-ENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLEL 98 (110)
T ss_dssp CEEEEECSSCCEEECBBS-SSBCC--------CCSSEEEEEC-TTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEE
T ss_pred EEEEEEEcCCCEEEEEEC-CEECC--------CCCceEEEEe-cCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEE
Confidence 789999999 99999982 22221 2222222221 2346789999999999999999994 45566778888
Q ss_pred EEEcCCC
Q psy3125 79 NVDDRGR 85 (163)
Q Consensus 79 ~V~~~~~ 85 (163)
.|..++.
T Consensus 99 ~V~~~p~ 105 (110)
T 2dm3_A 99 VVAAKES 105 (110)
T ss_dssp EEECCCC
T ss_pred EEeCCCC
Confidence 8887653
No 281
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.28 E-value=9.2e-12 Score=76.83 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=51.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccC--CCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQ--NSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~ 76 (163)
|.|.+.|.| +.|.|+| ++..+. .+.++.+.... .....+|.|.+++.+|+|.|+|.+ |..+.....+
T Consensus 25 l~C~~~g~P~p~i~W~k--~g~~l~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 95 (118)
T 1wwc_A 25 IEFVVRGNPPPTLHWLH--NGQPLR-------ESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTI 95 (118)
T ss_dssp EEEEEECSSCCEEEEEE--TTEECC-------CSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEEEeeeeCCCeEEEEE--CCEECC-------CCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEE
Confidence 579999999 9999998 333222 23333332211 113568999999999999999999 5566666777
Q ss_pred EEEEEcCC
Q psy3125 77 MLNVDDRG 84 (163)
Q Consensus 77 ~l~V~~~~ 84 (163)
.|.|...+
T Consensus 96 ~l~v~~~P 103 (118)
T 1wwc_A 96 NGHFLKEP 103 (118)
T ss_dssp EECCSCCC
T ss_pred EEEEccCC
Confidence 77766554
No 282
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=8e-12 Score=75.65 Aligned_cols=70 Identities=17% Similarity=0.257 Sum_probs=50.6
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+.+..|.|+| ++..+ ....|+.+.. .....+|.|.+++.+|+|.|+|.+.+. ..+..+.|.|
T Consensus 28 l~C~~~~~~~~v~W~k--~g~~~-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~-~~~~~~~l~V 95 (106)
T 2dlt_A 28 FKCEVSDEKVTGKWYK--NGVEV-------RPSKRITISH--VGRFHKLVIDDVRPEDEGDYTFVPDGY-ALSLSAKLNF 95 (106)
T ss_dssp CCCEESCSSCEEEEEE--SSCBC-------CCCSSCEEEE--ETTEEEEEESSCCTTTCSCEEEEEETS-CCCCCBCEEE
T ss_pred EEEEEcCCCcceEEEc--CCEEC-------cCCCCEEEEE--eCCEEEEEECCCCcCCCEEEEEEEccC-CceEEEEEEE
Confidence 7899999883399998 32222 2345776664 234678999999999999999999665 4455666776
Q ss_pred Ec
Q psy3125 81 DD 82 (163)
Q Consensus 81 ~~ 82 (163)
..
T Consensus 96 ~~ 97 (106)
T 2dlt_A 96 LE 97 (106)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 283
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=5.2e-12 Score=76.41 Aligned_cols=70 Identities=19% Similarity=0.311 Sum_probs=52.1
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.+.+ +.|.|+| ++..+ ..++|+.+.. ..+..+|.|.+++.+|+|.|+|.+.+ ....+.|
T Consensus 28 l~C~v~~~~~~~~v~W~k--~g~~i-------~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~~---~~~~a~L 93 (104)
T 2eny_A 28 FECVLSHESASDPAMWTV--GGKTV-------GSSSRFQATR--QGRKYILVVREAAPSDAGEVVFSVRG---LTSKASL 93 (104)
T ss_dssp EEEECSSCCCSSCBCCBS--SSSBC-------SBCSSCEEEE--ETTEEEEEECSCCTTTCSCEEEEETT---EEEEECE
T ss_pred EEEEEcCCCCCceeEEEE--CCEEC-------CCCCCEEEEE--cCCEEEEEECCCCHHHCEEEEEEECC---eeEEEEE
Confidence 689999887 4799997 32222 2355777765 23577899999999999999999843 3567778
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|.+++
T Consensus 94 ~V~~~p 99 (104)
T 2eny_A 94 IVRERS 99 (104)
T ss_dssp EEECCC
T ss_pred EEeCCC
Confidence 888764
No 284
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=1.2e-11 Score=74.15 Aligned_cols=69 Identities=23% Similarity=0.329 Sum_probs=49.4
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCC----eEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDA----RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~----r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~ 76 (163)
|.|.+.+.++.|.|+| ++..+. ... ||.+.. .....+|.|.+++.+|+|.|+|.+.+ ....+
T Consensus 28 l~C~~~~~~~~v~W~k--~g~~i~-------~~~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~~ 93 (101)
T 2edk_A 28 MAVEVSEEGAQVMWMK--NGVELT-------REDSFKARYRFKK--DGKRHILIFSDVVQEDRGRYQVITNG---GQCEA 93 (101)
T ss_dssp CCEEESCSSCCCEEEE--SSCBCC-------CSCCSSCCCEEEE--CSSEEEEECSSCCGGGCSBEEEECSS---CEECC
T ss_pred EEEEEeCCCCEEEEEE--CCEECC-------CCCCcceeEEEEE--CCCEEEEEECCCChhhCEEEEEEEcC---CcEEE
Confidence 6899998889999998 322221 222 667664 34567899999999999999999964 33445
Q ss_pred EEEEEcC
Q psy3125 77 MLNVDDR 83 (163)
Q Consensus 77 ~l~V~~~ 83 (163)
.|.|.++
T Consensus 94 ~l~V~~~ 100 (101)
T 2edk_A 94 ELIVEEK 100 (101)
T ss_dssp BEEEECC
T ss_pred EEEEeCC
Confidence 5666654
No 285
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.25 E-value=2.2e-11 Score=72.55 Aligned_cols=80 Identities=13% Similarity=0.102 Sum_probs=60.9
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEE------EecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFS------VIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.+....+..|..+.+.|.. .+.+.+.|++++..+. +.. .......|.|.+++.+|+|.|+|.| |..|..+
T Consensus 11 ~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~ 89 (99)
T 1g1c_A 11 RIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYW-PEDNVCELVIRDVTGEDSASIMVKAINIAGETS 89 (99)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE-EETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEE-cCCCEEEEEECCCCcCCCEEEEEEEEECCCcEE
Confidence 3445677888889999963 3556788988765322 111 1133557999999999999999999 9999999
Q ss_pred EEEEEEEecC
Q psy3125 154 MAIMLNVDGK 163 (163)
Q Consensus 154 ~~~~L~V~~~ 163 (163)
..+.|.|.+|
T Consensus 90 ~~~~l~V~~~ 99 (99)
T 1g1c_A 90 SHAFLLVQAK 99 (99)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEecC
Confidence 9999999986
No 286
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.25 E-value=4.3e-11 Score=73.18 Aligned_cols=69 Identities=23% Similarity=0.401 Sum_probs=51.9
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+. +.|.|+| +... +....|+.+... ....+|.|.+++.+|+|.|+|.+ +.....+.|.|
T Consensus 39 l~C~~~~~-p~v~W~k--~~~~-------l~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a---~~~~~~~~l~V 103 (113)
T 2edh_A 39 LRCELSKM-APVEWWK--GHET-------LRDGDRHSLRQD--GARCELQIRGLVAEDAGEYLCMC---GKERTSAMLTV 103 (113)
T ss_dssp EEEEESSC-CCCEEEE--SSSB-------CCCSSSEEEEEE--TTEEEEEECSCCSTTCEEEEEEE---TTEEEEEEEEE
T ss_pred EEEEECCC-CcEEEEE--CCEE-------CCCCCcEEEEEC--CCEEEEEECCCChhhCEEEEEEe---CCCCEEEEEEE
Confidence 57999775 7899998 2222 223568877752 34678999999999999999999 45666778888
Q ss_pred EcCC
Q psy3125 81 DDRG 84 (163)
Q Consensus 81 ~~~~ 84 (163)
..++
T Consensus 104 ~~~p 107 (113)
T 2edh_A 104 RAMP 107 (113)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 7764
No 287
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.24 E-value=3.3e-11 Score=74.70 Aligned_cols=84 Identities=15% Similarity=0.269 Sum_probs=53.8
Q ss_pred CceEEecC----C-CcEEEEEecCC---e--eEEec-ceEec-----CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEE
Q psy3125 1 MACTVMGL----G-RPVSWMRKRDL---H--ILTTN-IYTYT-----GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 64 (163)
Q Consensus 1 l~C~~~~~----~-~~v~W~k~~~~---~--~~~~~-~~~~~-----~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 64 (163)
|+|.+... + ..|.|+|.+.. . ++... +.... ..+|+.+......++.+|.|.+++.+|+|.|.|
T Consensus 19 L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 98 (124)
T 1neu_A 19 LHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTC 98 (124)
T ss_dssp ECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEECSCCGGGCEEEEE
T ss_pred EEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEEccCChhhCEEEEE
Confidence 68998753 4 88999986432 1 22222 22221 146888764323457889999999999999999
Q ss_pred EeeCCCC---eeEEEEEEEEcCC
Q psy3125 65 QVNTEPK---MNMAIMLNVDDRG 84 (163)
Q Consensus 65 ~~~~~~~---~~~~~~l~V~~~~ 84 (163)
.+.+.+. ....+.|.|.+.+
T Consensus 99 ~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 99 DVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp EEEC----CCEEEEEEEEEEC--
T ss_pred EEEcCCCCcCcEeeEEEEEecCC
Confidence 9965332 3567788887764
No 288
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.24 E-value=2.2e-11 Score=73.19 Aligned_cols=69 Identities=16% Similarity=0.382 Sum_probs=51.2
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.+ + |.|+| +...+ ....|+.+.. .....+|.|.+++.+|+|.|+|.+ +.....+.|.
T Consensus 28 l~C~~~~~p~~-v~W~k--~~~~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~---g~~~~~~~l~ 92 (103)
T 2e7b_A 28 LRCVLSSVAAP-VKWCY--GNNVL-------RPGDKYSLRQ--EGAMLELVVRNLRPQDSGRYSCSF---GDQTTSATLT 92 (103)
T ss_dssp EEEECSSCCCS-CEEEE--SSSBC-------CCSSSEEEEE--CSSEEEEEECSCCTTTCCCEEEEC---SSCBCCBCEE
T ss_pred EEEEEeCCCCC-eEEEE--CCEEC-------CCCCcEEEEE--cCCEEEEEEccCCcccCEEEEEEE---CCcEEEEEEE
Confidence 689999999 7 99998 22222 2356777775 345778999999999999999994 3345556777
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|.+++
T Consensus 93 V~~~p 97 (103)
T 2e7b_A 93 VTALP 97 (103)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 77664
No 289
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=7.6e-11 Score=71.97 Aligned_cols=69 Identities=14% Similarity=0.335 Sum_probs=51.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+. .| +.|.|+| ++..+ ....|+.+.. .....+|.|.+++.+|+|.|+|.+.+ .+..+.|.
T Consensus 33 L~C~~~-~p~~~v~W~k--~g~~~-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~l~ 97 (113)
T 2cpc_A 33 LTCELC-RPWAEVRWTK--DGEEV-------VESPALLLQK--EDTVRRLVLPAVQLEDSGEYLCEIDD---ESASFTVT 97 (113)
T ss_dssp EEEEES-CTTCCCEEEE--TTEEC-------CCBTTBEEEE--CSSEEEEEESSCCTTTCEEEEEESSS---CEEEEEEE
T ss_pred EEEEec-CCCCeEEEEE--CCEEC-------ccCCCEEEEE--CCCEEEEEECCCCcccCEEEEEEEec---CcEEEEEE
Confidence 579996 66 9999998 33222 2345666664 23457899999999999999999965 56677888
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|..++
T Consensus 98 V~~~p 102 (113)
T 2cpc_A 98 VTEPP 102 (113)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 88765
No 290
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.23 E-value=4.4e-11 Score=72.72 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEec----CCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEE
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIH----PQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMA 155 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~ 155 (163)
.+....+..|..+.+.|.. .+.+.+.|++++..+.... ........|.|.+++.+|+|.|+|.| |..|..+..
T Consensus 19 ~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 98 (107)
T 3knb_B 19 FPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAA 98 (107)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEE
Confidence 3445678889999999964 4556789998765332111 11234567999999999999999999 999999999
Q ss_pred EEEEEec
Q psy3125 156 IMLNVDG 162 (163)
Q Consensus 156 ~~L~V~~ 162 (163)
+.|.|..
T Consensus 99 ~~l~V~~ 105 (107)
T 3knb_B 99 AAVTVLE 105 (107)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9999975
No 291
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.23 E-value=5.8e-11 Score=82.09 Aligned_cols=141 Identities=8% Similarity=0.095 Sum_probs=78.3
Q ss_pred CceEEecC---C-C-cEEEEEecCCeeEEec--ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-e
Q psy3125 1 MACTVMGL---G-R-PVSWMRKRDLHILTTN--IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK-M 72 (163)
Q Consensus 1 l~C~~~~~---~-~-~v~W~k~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-~ 72 (163)
|.|.+.+. | + .|.|+|.+ ..+.... ......+++|. ...+|.|.+++.+|+|.|+|++.+... .
T Consensus 37 L~C~~~g~~~~P~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~-------~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 37 VTCVVVDISQNDPEVRFSWFIDD-VEVHTAQTHAPEKQSNSTLR-------SVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp EEEEEEEECTTCCCCEEEEEESS-CEECCCEECCCEECTTSCEE-------EEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred EEEEEecCccCCCCCEEEEEECC-ccccCcccccceEcCCCcEE-------EEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 68999987 6 5 89999844 3332110 00111223332 235799999999999999999965322 1
Q ss_pred eEEEEE----EEEcCCCceEe-------eCCCeEEEecCCC---C-ceeEEEEeCCCeEEE--ec----CCCC---ceEE
Q psy3125 73 NMAIML----NVDDRGRGARL-------SAGPLLNFAFPDL---L-TTNIYTYTGDARFSV--IH----PQNS---DEWN 128 (163)
Q Consensus 73 ~~~~~l----~V~~~~~~~~v-------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~--~~----~~~~---~~~~ 128 (163)
.....+ .+..++ .+.+ ..|..+.+.|... + ...+.|++++..+.. .. ...+ ....
T Consensus 109 ~~~~~v~~~~~~~~~P-~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~ 187 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGP-QVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSK 187 (239)
T ss_dssp CEEEEECCCSSCCBCC-EEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEE
T ss_pred CcEEEEecCCCCCcCC-EEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEE
Confidence 111122 111121 1111 1245688888642 2 246889987653310 00 1111 1234
Q ss_pred EEecccCcCCCeeEEEEc-CCCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
|.|.....+|.|.|+|.| +...
T Consensus 188 l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 188 LNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp EEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEChhhcCCCCEEEEEEECCCC
Confidence 666666667899999999 6543
No 292
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2e-11 Score=75.02 Aligned_cols=72 Identities=14% Similarity=0.235 Sum_probs=52.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+.+.| +.|.|+| ++..+ ..+.|+.+... ..+..+|.|.+++.+|+|.|+|.+ +.....+.|.
T Consensus 33 l~C~~~g~p~p~v~W~k--~g~~l-------~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~---g~~~~~~~L~ 99 (115)
T 2cr6_A 33 FRCRISPANYEPVHWFL--DKTPL-------HANELNEIDAQ-PGGYHVLTLRQLALKDSGTIYFEA---GDQRASAALR 99 (115)
T ss_dssp CCCEEESTTCCSCEEEE--SSCEE-------CCSSSCCBCCB-TTTBCCBEECSCCTTTCEEEEEEE---TTEECCEEEE
T ss_pred EEEEEcCCCCCccEEEE--CCEEC-------CCCCcEEEEEc-CCCEEEEEEcCCChhhCEEEEEEE---CCeeEEEEEE
Confidence 789999999 8999998 33222 23455555421 234667999999999999999995 3445567888
Q ss_pred EEcCCC
Q psy3125 80 VDDRGR 85 (163)
Q Consensus 80 V~~~~~ 85 (163)
|..++.
T Consensus 100 V~~~p~ 105 (115)
T 2cr6_A 100 VTEKPS 105 (115)
T ss_dssp EECCSS
T ss_pred EECCCc
Confidence 887653
No 293
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.23 E-value=1.1e-11 Score=92.98 Aligned_cols=144 Identities=14% Similarity=0.118 Sum_probs=76.6
Q ss_pred CceEEecC-C--CcEEEEEecCCeeE-EecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CCeeEE
Q psy3125 1 MACTVMGL-G--RPVSWMRKRDLHIL-TTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PKMNMA 75 (163)
Q Consensus 1 l~C~~~~~-~--~~v~W~k~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~~~~~ 75 (163)
|.|.+.+. | +.|.|+|.+ ..+. .........+++|... ..|.|.+++.+| |.|+|++.+. ......
T Consensus 152 L~C~~~g~~P~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~-------s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 222 (457)
T 1hzh_H 152 LGCLVKDYFPEPVTVSWNSGA-LTSGVHTFPAVLQSSGLYSLS-------SVVTVPSSSLGT-QTYICNVNHKPSNTKVD 222 (457)
T ss_dssp EEEEEESBBSCCCEEEETTTT-BCTTEEEEEEEECTTSCEEEE-------EEEEECSGGGGT-SCCEEEEEEGGGTEEEE
T ss_pred EEEEEeEEeCCCeEEEEEeCC-EeccceEcCceECCCCCEEEE-------EEEEecccccCC-ceEEEEEEeCCCCccee
Confidence 57999987 4 689998732 1110 0011111233444322 369999999999 9999999542 222222
Q ss_pred EEEEEEc------------------------CCCce-EeeCCCeEEEecCCC--Cc----eeEEEEeCCCeEEE------
Q psy3125 76 IMLNVDD------------------------RGRGA-RLSAGPLLNFAFPDL--LT----TNIYTYTGDARFSV------ 118 (163)
Q Consensus 76 ~~l~V~~------------------------~~~~~-~v~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~------ 118 (163)
..+.+.. ++... .+..|..+.+.|... +. ..+.|++++..+..
T Consensus 223 ~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~ 302 (457)
T 1hzh_H 223 KKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 302 (457)
T ss_dssp EECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEE
T ss_pred EEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccc
Confidence 2222110 11100 134577888888632 22 27889988754321
Q ss_pred ecCCCCc---eEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 119 IHPQNSD---EWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 119 ~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.....+. ...|.|.....+|+|.|+|.| |..+...
T Consensus 303 ~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~ 341 (457)
T 1hzh_H 303 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 341 (457)
T ss_dssp EECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSC
T ss_pred eecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCc
Confidence 1111111 122334444445599999999 6654443
No 294
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.22 E-value=4.6e-11 Score=71.14 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=60.5
Q ss_pred cCCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEe-----cCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 82 DRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVI-----HPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 82 ~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
..+....+..|..+.+.|.. .+.+.+.|++++..+... .........|.|.+++.+|+|.|+|.| |..|..+
T Consensus 10 ~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~ 89 (99)
T 1u2h_A 10 VSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQ 89 (99)
T ss_dssp ECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCcee
Confidence 34445677888889999963 345678898876532211 011233457999999999999999999 8899999
Q ss_pred EEEEEEEecC
Q psy3125 154 MAIMLNVDGK 163 (163)
Q Consensus 154 ~~~~L~V~~~ 163 (163)
..+.|.|.++
T Consensus 90 ~~~~l~V~~~ 99 (99)
T 1u2h_A 90 CEARLEVRGE 99 (99)
T ss_dssp EEEEEEEEC-
T ss_pred EEEEEEEECC
Confidence 9999999985
No 295
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.22 E-value=3.1e-11 Score=83.69 Aligned_cols=104 Identities=15% Similarity=0.229 Sum_probs=50.3
Q ss_pred cCcCCCeeEEEEeeCCCCeeEEEEEE------EEcCCCceEeeCCCeEEEecCCC--C-----ceeEEEEeCC-------
Q psy3125 54 AQKRDAGIYECQVNTEPKMNMAIMLN------VDDRGRGARLSAGPLLNFAFPDL--L-----TTNIYTYTGD------- 113 (163)
Q Consensus 54 v~~~D~G~Y~C~~~~~~~~~~~~~l~------V~~~~~~~~v~~~~~~~~~~~~~--~-----~~~~~~~~~~------- 113 (163)
++.+|+|.|+|.+. +.....+.+. +...+....+..|..+.+.|... + ...+.|++..
T Consensus 11 v~~~dsg~Y~C~a~--g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~ 88 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS--GYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKR 88 (254)
T ss_dssp -----------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEE
T ss_pred ecCCccEEEEEcCc--hhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceE
Confidence 68899999999996 2222222222 22224456778899999999632 2 2678898632
Q ss_pred -------------CeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCC-ccEEEEEEEe
Q psy3125 114 -------------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPK-MNMAIMLNVD 161 (163)
Q Consensus 114 -------------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~-~~~~~~L~V~ 161 (163)
.|+.+.. ......|.|.+++.+|+|.|+|.| +..+. ....+.|.|.
T Consensus 89 ~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~ 149 (254)
T 2c1o_A 89 LIYLVSKLDSGDPDRFTGSG--SGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK 149 (254)
T ss_dssp EEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC
T ss_pred EEEeccccCCCccceEEEec--CCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEEC
Confidence 1232221 123557999999999999999999 55332 2223345553
No 296
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.22 E-value=2.3e-11 Score=72.16 Aligned_cols=65 Identities=18% Similarity=0.366 Sum_probs=47.1
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l~ 79 (163)
|.|.+.+.|+.|.|+| ++..+ ..+.|+.+. +.+|.|.+++.+|+|.|+|.+. ..+.....+.|.
T Consensus 29 l~C~~~g~pp~i~W~k--~g~~~-------~~~~~~~~~------~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 93 (95)
T 2ckn_A 29 LRCRLRDDVQSINWLR--DGVQL-------VESNRTRIT------GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVN 93 (95)
T ss_dssp EECCEESSCCEEEEEB--TTBCC-------CCCSSEEEC------SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEECCCCCCceEEEE--CCEec-------CCCCCEEEe------CCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEE
Confidence 5799999889999998 32222 234566554 3479999999999999999994 445555666665
Q ss_pred E
Q psy3125 80 V 80 (163)
Q Consensus 80 V 80 (163)
|
T Consensus 94 V 94 (95)
T 2ckn_A 94 V 94 (95)
T ss_dssp E
T ss_pred E
Confidence 5
No 297
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.22 E-value=3.1e-11 Score=75.41 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=51.6
Q ss_pred CceEEecCC----CcEEEEEecCCe-eEEe-cceEe------cCCCeEEEeccCC-CCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLH-ILTT-NIYTY------TGDARFSVIHPQN-SDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~-~~~~-~~~~~------~~~~r~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+...+ ..|.|+|.+... ++.. ..... ...+|+.+..... .++++|.|.+++.+|+|.|+|++.
T Consensus 25 L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~~~D~G~Y~C~v~ 104 (125)
T 4gos_A 25 LSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYII 104 (125)
T ss_dssp EEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCChHHCEEEEEEEE
Confidence 689987543 469999854322 2211 11111 1135777765321 347899999999999999999994
Q ss_pred -CCCCeeEEEEEEE
Q psy3125 68 -TEPKMNMAIMLNV 80 (163)
Q Consensus 68 -~~~~~~~~~~l~V 80 (163)
..+.....+.|+|
T Consensus 105 ~~~g~~~~~v~LkV 118 (125)
T 4gos_A 105 TSKGKGNANLEYKT 118 (125)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEEE
Confidence 4445566667766
No 298
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.3e-11 Score=76.08 Aligned_cols=71 Identities=23% Similarity=0.491 Sum_probs=52.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ..+.|+.+.. +.+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 28 l~C~~~g~p~p~i~W~k--~g~~~~------~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 94 (118)
T 2eo9_A 28 LSCVATGSPVPTILWRK--DGVLVS------TQDSRIKQLE-----NGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYI 94 (118)
T ss_dssp EECBCCCSSCCEEEEEE--SSSBCC------TTSTTEEEEE-----TTEEEEESCCGGGCCCEEEEEECSSCEEEEECCE
T ss_pred EEEEEEecCCCEEEEEE--CCEECc------CCCCeEEEcc-----CCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEE
Confidence 679999999 9999998 322221 1345666654 2379999999999999999994 45566677778
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|.+++
T Consensus 95 ~V~~~~ 100 (118)
T 2eo9_A 95 EVQEFG 100 (118)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 888764
No 299
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.21 E-value=5.3e-11 Score=71.93 Aligned_cols=66 Identities=14% Similarity=0.262 Sum_probs=46.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCC-CeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGD-ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+ +.| +.|.|+| ++..+ ..+ .|+.+... .+..+|.|.+++.+|+|.|+|.+.+ ....+.|
T Consensus 36 L~C~~-~~p~~~v~W~k--~g~~l-------~~~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~~---~~~~~~l 100 (104)
T 1pd6_A 36 LTVEL-ADHDAEVKWLK--NGQEI-------QMSGSKYIFESI--GAKRTLTISQCSLADDAAYQCVVGG---EKCSTEL 100 (104)
T ss_dssp EEEEC-SSSSSCCEEEE--SSSEE-------CCCSSSSEEEEE--TTEEEEEECSCSSSSCEEEEEEETT---EEECCEE
T ss_pred EEEEE-cCCCCEEEEEE--CCEEC-------CCCCCeEEEEec--CCEEEEEECCCCcccCEEEEEEECC---CcEEEEE
Confidence 67999 677 8999998 33222 223 57776642 3467899999999999999999933 3344556
Q ss_pred EEE
Q psy3125 79 NVD 81 (163)
Q Consensus 79 ~V~ 81 (163)
.|.
T Consensus 101 ~V~ 103 (104)
T 1pd6_A 101 FVK 103 (104)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 300
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.21 E-value=3.1e-11 Score=71.50 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=58.7
Q ss_pred CceEeeCCCeEEEecCCCCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 85 RGARLSAGPLLNFAFPDLLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
....+..|..+.+.|.....+.+.|++++..+............|.|.+++.+|+|.|+|.| |..|..+..+.|.|..
T Consensus 9 ~~~~v~~G~~~~l~C~~~~~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 87 (95)
T 4hwu_A 9 EAYVVAPGESLELQCMLKDAAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTD 87 (95)
T ss_dssp EEEEECTTSCEEEECCCCTTCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CcEEECCCCEEEEEEEeCCCCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeC
Confidence 34567789999999986667788999876543211111111236999999999999999999 8889999999999864
No 301
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2.4e-11 Score=72.63 Aligned_cols=69 Identities=17% Similarity=0.337 Sum_probs=49.0
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l~ 79 (163)
|.|.+.+.|+.|.|+|. ...+ ....|+.+. ..+|.|.+++.+|+|.|+|.+. ..+.....+.|.
T Consensus 23 L~C~~~g~pp~i~W~k~--g~~~-------~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 87 (99)
T 2cr3_A 23 LRCRLRDDVQSINWLRD--GVQL-------AESNRTRIT------GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87 (99)
T ss_dssp EECCCCSSCCEEEEEES--SSBC-------CCCSSEEEC------SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEecCCCCeEEEEEC--CEEC-------CCCCcEEEE------CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEE
Confidence 57999987799999983 2222 223455544 2379999999999999999994 445556666677
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|...+
T Consensus 88 V~~~~ 92 (99)
T 2cr3_A 88 VSDAL 92 (99)
T ss_dssp BCSCC
T ss_pred EecCC
Confidence 66553
No 302
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.20 E-value=7.9e-11 Score=79.42 Aligned_cols=140 Identities=8% Similarity=0.115 Sum_probs=72.5
Q ss_pred CceEEecCC-----CcEEEEEecCCeeEEecc---eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-C
Q psy3125 1 MACTVMGLG-----RPVSWMRKRDLHILTTNI---YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-K 71 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~ 71 (163)
|.|.+.+.+ ..|.|+| ++..+..+. .....++++.+. ..|.|.....+|+|.|+|++.+.. .
T Consensus 23 L~C~~~g~~p~~~~~~v~W~k--~~~~~~~~~~~~~~~~~~g~~~~~-------~~l~i~~~d~~d~g~Y~C~a~n~~~~ 93 (207)
T 1l6x_A 23 VTCVVVDVSHEDPEVKFNWYV--DGVEVHNAKTKPREEQYNSTYRVV-------SVLTVLHQDWLNGKEYKCKVSNKALP 93 (207)
T ss_dssp EEEEEEEECSSSCCCEEEEEE--TTEEECCCEECCCEECTTSCEEEE-------EEEECCHHHHHTTCCEEEEEECTTSS
T ss_pred EEEEEecccCCCCCeEEEEEE--CCccccCcccCCceeccCCcEEEE-------EEEEEEHHHccCCceEEEEEEcCcCC
Confidence 689999864 3899998 332221110 011112222222 124454555566999999995532 2
Q ss_pred eeEEEEEE----EEcCCCceEee-------CCCeEEEecCCC---C-ceeEEEEeCCCeEEEec------CCCC---ceE
Q psy3125 72 MNMAIMLN----VDDRGRGARLS-------AGPLLNFAFPDL---L-TTNIYTYTGDARFSVIH------PQNS---DEW 127 (163)
Q Consensus 72 ~~~~~~l~----V~~~~~~~~v~-------~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~------~~~~---~~~ 127 (163)
......+. +..++ .+.+. .+..+.+.|... + ...+.|++++..+.... ...+ ...
T Consensus 94 ~~~~~~v~~~~~~~~~P-~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s 172 (207)
T 1l6x_A 94 APIEKTISKAKGQPREP-QVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYS 172 (207)
T ss_dssp SCEEEEECCCCSCCBCC-EEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEE
T ss_pred cceEEEeccCCCCCcCC-EEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEE
Confidence 21222221 11221 11111 234588888642 2 24788998876432110 1111 123
Q ss_pred EEEecccCcCCCeeEEEEc-CCCC
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
.|.|.....+|+|.|+|.| |...
T Consensus 173 ~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 173 KLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEECHHHcCCCCEEEEEEEcCCc
Confidence 4667777778899999999 6543
No 303
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.20 E-value=4e-11 Score=86.82 Aligned_cols=141 Identities=11% Similarity=0.130 Sum_probs=78.1
Q ss_pred CceEEecC-C--CcEEEEEecCCee-EEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEE
Q psy3125 1 MACTVMGL-G--RPVSWMRKRDLHI-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMA 75 (163)
Q Consensus 1 l~C~~~~~-~--~~v~W~k~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~ 75 (163)
|.|.+.+. | +.|.|+|. +..+ ..........+++|... ..|.|.+++.+| |.|+|.+.+ .+.....
T Consensus 140 L~C~~~g~~P~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~-------s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 210 (344)
T 1za6_B 140 LGCLVKDYFPEPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLS-------SVVTVPSSSLGT-QTYICNVNHKPSNTKVD 210 (344)
T ss_dssp EEEEEEEEBSSCCCEEETTT-TBCTTEEECCCEECTTSCEEEE-------EEEEEETTHHHH-BCEEEEEEEGGGTEEEE
T ss_pred EEEEEeeEECCCeEEEEecC-CccCceeECCCeECCCCCEEEE-------EEEEEcHHHcCC-CcEEEEEEeCCCCccce
Confidence 57999986 5 69999873 2211 01011111234455433 359999999888 999999954 3222221
Q ss_pred EEEE--E---------------------EcCCCceEee-------CCCeEEEecCCC----CceeEEEEeCCCeEEEe--
Q psy3125 76 IMLN--V---------------------DDRGRGARLS-------AGPLLNFAFPDL----LTTNIYTYTGDARFSVI-- 119 (163)
Q Consensus 76 ~~l~--V---------------------~~~~~~~~v~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-- 119 (163)
..+. | ...++.+.+. .+..+.+.|... ....+.|++++..+...
T Consensus 211 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~ 290 (344)
T 1za6_B 211 KKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKT 290 (344)
T ss_dssp EEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEE
T ss_pred EeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEe
Confidence 1111 0 0011111111 234488888642 23568898877643211
Q ss_pred c----CCCC---ceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 120 H----PQNS---DEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 120 ~----~~~~---~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
. ...+ ....|.|.....+|+|.|+|.| +...
T Consensus 291 ~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l 329 (344)
T 1za6_B 291 TPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 329 (344)
T ss_dssp CCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTS
T ss_pred cceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCC
Confidence 0 1111 1245788888888999999999 6543
No 304
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=4.7e-11 Score=73.70 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCceEeeCCCeEEEecCC-----CCceeEEEEeCC---------CeEEEecC----CCCceEEEEecccCcCCCeeEEEE
Q psy3125 84 GRGARLSAGPLLNFAFPD-----LLTTNIYTYTGD---------ARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
+..+.+..|..+.+.|.. .+.+.+.|+++. .++.+... .......|+|.++.+.|+|.|+|+
T Consensus 19 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Ce 98 (118)
T 2edn_A 19 PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLE 98 (118)
T ss_dssp CCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEE
Confidence 456778889999999853 256799998863 34443221 111257899999999999999999
Q ss_pred c-CCCCCccEEEEEEEec
Q psy3125 146 V-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 146 a-~~~~~~~~~~~L~V~~ 162 (163)
| |..+..+..+.|+|+.
T Consensus 99 vsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 99 VKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp EECSSCEEEEEECCEEEC
T ss_pred EEEcCCcEEEEEEEEEEc
Confidence 9 9999999999999975
No 305
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.19 E-value=5.6e-11 Score=70.39 Aligned_cols=68 Identities=28% Similarity=0.464 Sum_probs=48.8
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l~ 79 (163)
|.|.+.+ ++.|.|+| ++..+ ....|+.+.. .+|.|.+++.+|+|.|+|.+. ..+.....+.|.
T Consensus 21 l~C~~~~-~p~v~W~k--~g~~~-------~~~~~~~~~~------~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 84 (95)
T 4hwu_A 21 LQCMLKD-AAVISWTK--DGVHL-------GPNNRTVLIG------EYLQIKGATPRDSGLYACTAARTVDSETWIFMVN 84 (95)
T ss_dssp EECCCCT-TCEEEEEE--TTEEE-------CCCSSEEEET------TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEeCC-CCEEEEEE--CCEEC-------CCCceEEEeC------CEEEECcCCcccCEEEEEEEccCCCcEEEEEEEE
Confidence 5788876 48999998 33322 3345666542 369999999999999999994 455666777777
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|.++.
T Consensus 85 V~~~~ 89 (95)
T 4hwu_A 85 VTDAA 89 (95)
T ss_dssp ECCC-
T ss_pred EeCCc
Confidence 77664
No 306
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.19 E-value=7.3e-11 Score=72.94 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=54.1
Q ss_pred CceEEecCC-C----cEEEEEecCC------eeE-EecceEe-----cCCCeEEEecc-CCCCeEEEEEcccCcCCCeeE
Q psy3125 1 MACTVMGLG-R----PVSWMRKRDL------HIL-TTNIYTY-----TGDARFSVIHP-QNSDEWNMKIDYAQKRDAGIY 62 (163)
Q Consensus 1 l~C~~~~~~-~----~v~W~k~~~~------~~~-~~~~~~~-----~~~~r~~~~~~-~~~~~~~L~i~~v~~~D~G~Y 62 (163)
|+|.+.+.+ . .|.|+|.+.. .++ ..+.... ...+|+.+... ...++++|.|.+++.+|+|.|
T Consensus 25 L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~Y 104 (126)
T 1eaj_A 25 LPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTY 104 (126)
T ss_dssp ECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCEEECSCCGGGCEEE
T ss_pred EEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEEEECcCChHHCeEE
Confidence 689998776 3 3999986432 222 2222221 12467777653 223468899999999999999
Q ss_pred EEEeeC-CCCeeEEEEEEEEcC
Q psy3125 63 ECQVNT-EPKMNMAIMLNVDDR 83 (163)
Q Consensus 63 ~C~~~~-~~~~~~~~~l~V~~~ 83 (163)
.|.+.+ .......+.|.|.++
T Consensus 105 ~C~v~~~~~~~~~~~~L~V~~p 126 (126)
T 1eaj_A 105 QCKVKKAPGVANKKIHLVVLVK 126 (126)
T ss_dssp EEEEEETTEEEEEEEEEEEEC-
T ss_pred EEEEEcCCccCCcEEEEEEEcC
Confidence 999954 334466777887653
No 307
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.19 E-value=6.9e-11 Score=71.56 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=53.7
Q ss_pred CceEEecCC----CcEEEEEecCC------eeEEecc--eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG----RPVSWMRKRDL------HILTTNI--YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~------~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ ..|.|+|.+.. .++...+ ......+|+.+......++.+|.|.+++.+|+|.|.|.+.+
T Consensus 14 L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~ 93 (109)
T 2oyp_A 14 LPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDDHGTYCCRIQF 93 (109)
T ss_dssp ECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEECC
T ss_pred EEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChhCeEEEEEEEc
Confidence 679988764 34999985421 2222221 12234678887654334578899999999999999999954
Q ss_pred -CCCeeEEEEEEEEc
Q psy3125 69 -EPKMNMAIMLNVDD 82 (163)
Q Consensus 69 -~~~~~~~~~l~V~~ 82 (163)
.......+.|.|.+
T Consensus 94 ~~~~~~~~~~l~V~V 108 (109)
T 2oyp_A 94 PGLMNDKKLELKLDI 108 (109)
T ss_dssp SSTTCCEEEEEEEEE
T ss_pred CCcccceEEEEEEEe
Confidence 33344566666653
No 308
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.19 E-value=1.2e-10 Score=70.74 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=49.8
Q ss_pred CceEEecCC----CcEEEEEecCCeeEEecceEecCCCeEEEecc----CCCCeEEEEEcccCcCCCeeEEEEe-eCCCC
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLHILTTNIYTYTGDARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQV-NTEPK 71 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~ 71 (163)
|.|.+.+.| +.|.|+| ++.... .. ....|+.+... ......+|.|.+++.+|+|.|+|.+ +..+.
T Consensus 24 L~C~~~g~p~~~~p~v~W~k--~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 97 (108)
T 3cx2_A 24 FSARVAGASLLKPPVVKWFK--GKWVDL-SS---KVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKF 97 (108)
T ss_dssp EEEEEECC-CCSCCEEEEEE--TTTEEG-GG---GCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred EEEEECCCccCCCcEEEEcc--CCcccc-cc---cCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCCCc
Confidence 689999876 6899998 322111 10 11235554321 1113678999999999999999999 44666
Q ss_pred eeEEEEEEEE
Q psy3125 72 MNMAIMLNVD 81 (163)
Q Consensus 72 ~~~~~~l~V~ 81 (163)
.+..+.|.|.
T Consensus 98 ~~~~~~L~V~ 107 (108)
T 3cx2_A 98 DCSNFNLTVH 107 (108)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEEEe
Confidence 7778888875
No 309
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=3.8e-11 Score=71.57 Aligned_cols=66 Identities=17% Similarity=0.339 Sum_probs=45.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+. ...+ ... ....+|.|.+++.+|+|.|+|.+.+ .+.....+.|
T Consensus 31 l~C~~~g~p~p~v~W~~--~g~~~~-------~~~~-~~~----~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 96 (99)
T 2yr3_A 31 LQCSVRGTPVPRITWLL--NGQPIQ-------YARS-TCE----AGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWV 96 (99)
T ss_dssp EECEEEEESCCCCEEEE--SSSBCS-------SCCC-EEE----TTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCE
T ss_pred EEEEEeeeCCCeEEEEE--CCEECc-------ccce-Eee----CCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 679999999 9999998 222221 1111 111 2467899999999999999999944 4555555555
Q ss_pred EE
Q psy3125 79 NV 80 (163)
Q Consensus 79 ~V 80 (163)
.|
T Consensus 97 ~V 98 (99)
T 2yr3_A 97 TV 98 (99)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 310
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=8.3e-11 Score=70.51 Aligned_cols=69 Identities=19% Similarity=0.396 Sum_probs=49.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+. .| +.|.|+| ++.. +..+.|+.+.. .....+|.|.+++.+|+|.|+|.+.+ ....+.|.
T Consensus 31 L~C~~~-~p~~~v~W~k--~g~~-------~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~~---~~~~~~l~ 95 (102)
T 2eo1_A 31 LSCEVA-QAQTEVTWYK--DGKK-------LSSSSKVRVEA--VGCTRRLVVQQAGQAEAGEYSCEAGG---QQLSFRLQ 95 (102)
T ss_dssp ECCBCS-CSSSCCEEEE--TTEE-------CCCCSSEEEEE--ETTEEEEEETTCCTTTCSCEEEEETT---EECCEEEE
T ss_pred EEEEec-CCCCceEEEE--CCEE-------CCCCCCEEEEE--cCCEEEEEECCCCcccCEEEEEEcCC---CcEEEEEE
Confidence 579998 66 9999998 3322 23345777664 23467899999999999999999943 33456777
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|.+++
T Consensus 96 V~~p~ 100 (102)
T 2eo1_A 96 VAGQC 100 (102)
T ss_dssp EESCC
T ss_pred EeCCC
Confidence 77653
No 311
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.18 E-value=6.2e-11 Score=72.71 Aligned_cols=82 Identities=22% Similarity=0.418 Sum_probs=53.9
Q ss_pred CceEEecC-C-CcEEEEEecCC------eeEEec-c-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL------HILTTN-I-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP 70 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~------~~~~~~-~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 70 (163)
|+|.+... . ..|.|+|.... .++... . ......+|+.+......++++|.|.+++.+|+|.|.|.+.+.+
T Consensus 17 L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~~ 96 (116)
T 2or8_A 17 LPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESDSGLYCCRVEIPG 96 (116)
T ss_dssp ECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCSS
T ss_pred EEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcccCEEEEEEEEcCC
Confidence 67998763 3 78999996421 223221 1 1133567888764334567889999999999999999996543
Q ss_pred -Ce--eEEEEEEEEc
Q psy3125 71 -KM--NMAIMLNVDD 82 (163)
Q Consensus 71 -~~--~~~~~l~V~~ 82 (163)
.. ...+.|.|..
T Consensus 97 ~~~~~~~~~~l~V~p 111 (116)
T 2or8_A 97 WFNDQKVTFSLQVKP 111 (116)
T ss_dssp TTCCEEEEEEEEEEC
T ss_pred cccccEEEEEEEECC
Confidence 22 4455555544
No 312
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.18 E-value=8.2e-11 Score=70.59 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=61.0
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCe------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.+....+..|..+.+.|.. .+.+.+.|++++.. +.+.. ......|.|.+++.+|+|.|+|.| |..|..+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~ 91 (103)
T 3qp3_A 14 RMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTN--TSGVLTLEILDCHTDDSGTYRAVCTNYKGEAS 91 (103)
T ss_dssp CCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEE--CCCEEEEEEcCCCcccCEEEEEEEEeCCCcEE
Confidence 3455677888889999963 45568889887643 22221 123557999999999999999999 9899999
Q ss_pred EEEEEEEecC
Q psy3125 154 MAIMLNVDGK 163 (163)
Q Consensus 154 ~~~~L~V~~~ 163 (163)
..+.|.|.|+
T Consensus 92 ~~~~l~V~~~ 101 (103)
T 3qp3_A 92 DYATLDVTGG 101 (103)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEECC
Confidence 9999999875
No 313
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.17 E-value=9.5e-11 Score=73.56 Aligned_cols=84 Identities=23% Similarity=0.428 Sum_probs=56.4
Q ss_pred CceEEecCC--CcEEEEEecCC---e-eEEecce--EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC
Q psy3125 1 MACTVMGLG--RPVSWMRKRDL---H-ILTTNIY--TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK 71 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~---~-~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~ 71 (163)
|.|.+.+.. ..|.|+|...+ . ++..... .....+||.+..+...+.++|.|.+++.+|+|.|.|.+.+ .+.
T Consensus 21 L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~ 100 (129)
T 3rrq_A 21 FTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPK 100 (129)
T ss_dssp EEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECGGG
T ss_pred EEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEecCCC
Confidence 579998764 67999986432 1 2222211 1112479998865456789999999999999999999943 333
Q ss_pred e----eEEEEEEEEcCC
Q psy3125 72 M----NMAIMLNVDDRG 84 (163)
Q Consensus 72 ~----~~~~~l~V~~~~ 84 (163)
. +..+.|.|.+.+
T Consensus 101 ~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 101 LQIKESLRAELRVTERR 117 (129)
T ss_dssp CEEEECCCEEEEEECCC
T ss_pred ceeeEeceEEEEEecCc
Confidence 2 456788888763
No 314
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.17 E-value=3.8e-10 Score=68.42 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=57.1
Q ss_pred CCceEeeCCCeEEEecCC--CCc---eeEEEEeCC---------CeEEEec----CCCCceEEEEecccCcCCCeeEEEE
Q psy3125 84 GRGARLSAGPLLNFAFPD--LLT---TNIYTYTGD---------ARFSVIH----PQNSDEWNMKIDYAQKRDAGIYECQ 145 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~--~~~---~~~~~~~~~---------~~~~~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~ 145 (163)
+....+..|..+.+.|.. .+. +.+.|++++ .++.+.. ........|.|.+++.+|+|.|+|.
T Consensus 11 p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (108)
T 3cx2_A 11 PQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCE 90 (108)
T ss_dssp CCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEE
Confidence 345567788889999863 333 678898764 2333221 1112356799999999999999999
Q ss_pred c-CCCCCccEEEEEEEe
Q psy3125 146 V-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 146 a-~~~~~~~~~~~L~V~ 161 (163)
| |..|..+..+.|.|.
T Consensus 91 a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 91 VSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EECSSCEEEEEEEEEEE
T ss_pred EecCCCceEEEEEEEEe
Confidence 9 999999999999986
No 315
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.17 E-value=1.3e-10 Score=70.68 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=53.0
Q ss_pred CceEE-ecCC-CcEEEEEecCCeeEEe--cce--Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCe
Q psy3125 1 MACTV-MGLG-RPVSWMRKRDLHILTT--NIY--TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKM 72 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~~~~~~~--~~~--~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~ 72 (163)
|+|.+ .+.+ +.|.|+|..+..+... +.. ... ..+|+.+.. .+++|.|.+++.+|+|.|.|.+.+....
T Consensus 23 L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~----~~~sL~I~~v~~~DsG~Y~C~v~~~~~~ 98 (110)
T 2ptt_A 23 LKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEE----NNGALHISNVRKEDKGTYYMRVLRETEN 98 (110)
T ss_dssp ECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECT----TTCCEEESSCCGGGCEEEEEEEESSSBC
T ss_pred EeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeC----CCccEEECCCCcccCeEEEEEEEcCCCc
Confidence 57988 5666 8999999333323321 111 111 125777652 4678999999999999999999655445
Q ss_pred eEEEEEEEEcC
Q psy3125 73 NMAIMLNVDDR 83 (163)
Q Consensus 73 ~~~~~l~V~~~ 83 (163)
...+.|.|.++
T Consensus 99 ~~~~~L~V~dp 109 (110)
T 2ptt_A 99 ELKITLEVFDP 109 (110)
T ss_dssp CEEEEEEEECC
T ss_pred EEEEEEEEEcc
Confidence 56778888764
No 316
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.16 E-value=2.3e-10 Score=76.81 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=55.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++.. +....++.+... .....+|.|.+++.+|+|.|+|.+ |..+.....+.|
T Consensus 137 l~C~~~g~p~p~v~W~~--~~~~-------~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 206 (212)
T 2r15_A 137 LTCNVWGDPPPEVSWLK--NEKA-------LAQTDHCNLKFE-AGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 206 (212)
T ss_dssp EEEEEECSSCCEEEEEE--TTEE-------ECCCSSEEEEEE-TTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEcCCCCceEEEEE--CCeE-------CccCCCEEEEEc-CCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEE
Confidence 579999999 9999998 3322 234556666653 234678999999999999999999 556666777778
Q ss_pred EEEcC
Q psy3125 79 NVDDR 83 (163)
Q Consensus 79 ~V~~~ 83 (163)
.|..+
T Consensus 207 ~V~~P 211 (212)
T 2r15_A 207 SVFIP 211 (212)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 87754
No 317
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1.4e-10 Score=72.39 Aligned_cols=80 Identities=20% Similarity=0.295 Sum_probs=61.7
Q ss_pred CCCceEeeCCCeEEEecCC-----CCceeEEEEeC---------CCeEEEecC----CCCceEEEEecccCcCCCeeEEE
Q psy3125 83 RGRGARLSAGPLLNFAFPD-----LLTTNIYTYTG---------DARFSVIHP----QNSDEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~~---------~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C 144 (163)
.+....+..|..+.+.|.. .+.+.+.|+++ +.++.+... .......|+|.++++.|+|.|+|
T Consensus 13 ~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~C 92 (126)
T 2dav_A 13 KPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRC 92 (126)
T ss_dssp CCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEE
T ss_pred cCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEE
Confidence 3456678889999999852 25689999986 245555321 11235789999999999999999
Q ss_pred Ec-CCCCCccEEEEEEEec
Q psy3125 145 QV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~~~~~~~~L~V~~ 162 (163)
+| |..+..+..+.|.|..
T Consensus 93 evsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 93 EVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEECSSCEEEECCEEEEEC
T ss_pred EEEeCCCcEEEEEEEEEEe
Confidence 99 8889999999999976
No 318
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.16 E-value=3.6e-10 Score=71.57 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=54.5
Q ss_pred CceEEecCC----CcEEEEEecCCe-eEEe-cceEe------cCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLH-ILTT-NIYTY------TGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~-~~~~-~~~~~------~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.+ ..|.|+|.+... +... ..... ...+|+.+.... ..++.+|.|.+++.+|+|.|+|.+.
T Consensus 26 L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~ 105 (139)
T 1pko_A 26 LPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFR 105 (139)
T ss_dssp EEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSCCGGGCEEEEEEEE
T ss_pred EeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccCCHHHCEEEEEEEE
Confidence 689998653 689999965322 2211 11111 124688876531 2357899999999999999999995
Q ss_pred C-CCCeeEEEEEEEEcC
Q psy3125 68 T-EPKMNMAIMLNVDDR 83 (163)
Q Consensus 68 ~-~~~~~~~~~l~V~~~ 83 (163)
+ .+.....+.|.|..+
T Consensus 106 ~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 106 DHSYQEEAAVELKVEDP 122 (139)
T ss_dssp ETTEEEEEEEEEEEECT
T ss_pred cCCCceEEEEEEEEecC
Confidence 4 334566778888855
No 319
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.16 E-value=4.8e-10 Score=74.25 Aligned_cols=75 Identities=24% Similarity=0.420 Sum_probs=55.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccC-cCCCeeEEEEe-eCCCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQ-KRDAGIYECQV-NTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~~-~~~~~~~~~~~ 77 (163)
|.|.+.+.| +.+.|+|.+++..+... ..++|+.+.. .....+|.|.+++ .+|+|.|+|.+ +..+.....+.
T Consensus 112 l~C~~~g~p~p~i~W~~~~~g~~~~~~----~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 185 (190)
T 2wv3_A 112 MYCKSVGYPHPEWMWRKKENGVFEEIS----NSSGRFFIIN--KENYTELNIVNLQITEDPGEYECNATNSIGSASVSTV 185 (190)
T ss_dssp EEEEEECSSCCEEEEEEEETTEEEECC----CTTSCEEEEE--CSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEeCccCCCceEEEEcCCCceeeee----cCCCeEEEec--CCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEE
Confidence 579999999 99999986444443211 2456777765 3346789999999 79999999999 44566667777
Q ss_pred EEEE
Q psy3125 78 LNVD 81 (163)
Q Consensus 78 l~V~ 81 (163)
|.|.
T Consensus 186 l~V~ 189 (190)
T 2wv3_A 186 LRVR 189 (190)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 320
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.16 E-value=8.1e-11 Score=73.22 Aligned_cols=83 Identities=24% Similarity=0.348 Sum_probs=51.2
Q ss_pred CceEEecCC----CcEEEEEecCCe---eE-Ee-cce-Ee---cCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEe
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLH---IL-TT-NIY-TY---TGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQV 66 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~---~~-~~-~~~-~~---~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~ 66 (163)
|+|.+.+.+ ..|.|+|.+... .+ .. ... .. ...+|+.+.... ..++++|.|.+++.+|+|.|.|++
T Consensus 20 L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v 99 (123)
T 4gjt_B 20 LPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRV 99 (123)
T ss_dssp ECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESCCSSSCSEEEEEE
T ss_pred EEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCCChHHCEEEEEEE
Confidence 689998765 458899854221 11 11 110 00 013566665432 245789999999999999999999
Q ss_pred eC--CCCeeEEEEEEEEcC
Q psy3125 67 NT--EPKMNMAIMLNVDDR 83 (163)
Q Consensus 67 ~~--~~~~~~~~~l~V~~~ 83 (163)
.+ .+.....+.|.|.+-
T Consensus 100 ~t~~~g~~~~~~~L~VlE~ 118 (123)
T 4gjt_B 100 STFPAGSFQARLRLRVLEH 118 (123)
T ss_dssp EESSSCEEEEEEEEEC---
T ss_pred EECCCCeEEeEEEEEEEEC
Confidence 64 345566777887754
No 321
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1.1e-10 Score=71.42 Aligned_cols=79 Identities=15% Similarity=0.088 Sum_probs=60.7
Q ss_pred CCCceEeeCCCeEEEecC--CCCceeEEEEeCCCe------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 83 RGRGARLSAGPLLNFAFP--DLLTTNIYTYTGDAR------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.+....+..|..+.+.|. ..+.+.+.|++++.. +.+.. ......|.|.+++.+|+|.|+|.| |..|..+
T Consensus 13 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~ 90 (114)
T 2cqv_A 13 FPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVEN--SENGSKLTILAARQEHCGCYTLLVENKLGSRQ 90 (114)
T ss_dssp CCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEE--CSSEEEEEETTCCTTTCEEEEEEEECSSCEEE
T ss_pred CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEE--cCCEEEEEECCCChhcCEEEEEEEEECCCcEE
Confidence 345567788888999996 345578889987653 33332 133567999999999999999999 8889988
Q ss_pred EEEEEEEecC
Q psy3125 154 MAIMLNVDGK 163 (163)
Q Consensus 154 ~~~~L~V~~~ 163 (163)
..+.|.|.++
T Consensus 91 ~~~~l~V~~~ 100 (114)
T 2cqv_A 91 AQVNLTVVDK 100 (114)
T ss_dssp CCEEEEEECS
T ss_pred EEEEEEEECC
Confidence 8999998753
No 322
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=1.7e-10 Score=69.26 Aligned_cols=69 Identities=17% Similarity=0.335 Sum_probs=50.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 79 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~ 79 (163)
|.|.+ +.| +.|.|+| +... +....|+.+.. .....+|.|.+++.+|+|.|+|.+ +.....+.|.
T Consensus 28 l~C~~-~~p~~~v~W~k--~~~~-------l~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~---g~~~~~~~l~ 92 (103)
T 2dku_A 28 FTCKT-EHPAATVTWRK--GLLE-------LRASGKHQPSQ--EGLTLRLTISALEKADSDTYTCDI---GQAQSRAQLL 92 (103)
T ss_dssp EEEEC-SSCCSCCEEEE--SSCB-------CCSSSSEEEEE--ETTEEEEEEESCCTTTCSEEEEEC---SSCBCCEEEE
T ss_pred EEEEe-CCCCCeEEEEe--CCEE-------CCCCCeEEEEe--CCCEEEEEECCCCcccCEEEEEEe---CCceEEEEEE
Confidence 57995 677 9999998 2222 22345777764 235678999999999999999994 3445567788
Q ss_pred EEcCC
Q psy3125 80 VDDRG 84 (163)
Q Consensus 80 V~~~~ 84 (163)
|...+
T Consensus 93 V~~~p 97 (103)
T 2dku_A 93 VQGRR 97 (103)
T ss_dssp EECSC
T ss_pred EeCcc
Confidence 88764
No 323
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.15 E-value=2.4e-10 Score=69.91 Aligned_cols=67 Identities=21% Similarity=0.331 Sum_probs=47.6
Q ss_pred CceEEecCCCcEEEEEecCC-e--eE-EecceEecCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLGRPVSWMRKRDL-H--IL-TTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~-~--~~-~~~~~~~~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.++.|.|+|.... . .+ ..... ....+|+.+.... ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~v~W~r~~~~~~~~~l~~~~~~-~~~~~r~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n 92 (113)
T 1h5b_A 21 LRCNFTTTMRSVQWFRQNSRGSLISLFYLASG-TKENGRLKSAFDSERARYSTLHIRDAQLEDSGTYFCAAEA 92 (113)
T ss_dssp EEEEESSCCSEEEEEEECTTSCEEEEEEESSS-EEEETTEEEECCSSSSSEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEECCCCceEEEEEECCCCCeEEEEEECCC-CccCCceEEEEccCCCCEEEEEECCCChhhCEEEEEEEec
Confidence 68999876678999986532 1 12 11111 1235788887543 45688999999999999999999954
No 324
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.15 E-value=2.2e-10 Score=68.27 Aligned_cols=80 Identities=16% Similarity=0.274 Sum_probs=60.2
Q ss_pred CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC-----CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEE
Q psy3125 84 GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP-----QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMA 155 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~ 155 (163)
+....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|.|+|.| |..|..+..
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFT 91 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEE
Confidence 445667788889999974 34567889987654322111 0122357999999999999999999 888999999
Q ss_pred EEEEEecC
Q psy3125 156 IMLNVDGK 163 (163)
Q Consensus 156 ~~L~V~~~ 163 (163)
+.|.|..|
T Consensus 92 ~~l~V~~~ 99 (100)
T 2kdg_A 92 VQLDVLAK 99 (100)
T ss_dssp EEEEEECC
T ss_pred EEEEEEec
Confidence 99999875
No 325
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.15 E-value=5.6e-11 Score=70.93 Aligned_cols=70 Identities=20% Similarity=0.431 Sum_probs=46.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+| ++..+.... ...++.... +..+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 28 l~C~~~g~p~p~v~W~~--~~~~~~~~~----~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 97 (100)
T 3caf_A 28 FRCPAGGNPMPTMRWLK--NGKEFKQEH----RIGGYKVRN----QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHL 97 (100)
T ss_dssp EECCEEEESCCEEEEEE--TTEECCGGG----STTCCEEEG----GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccccCCCEEEEEE--CCEEccccc----ccccEEEec----CeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEE
Confidence 579999999 9999998 332222110 011222222 2457999999999999999999 445555666666
Q ss_pred EE
Q psy3125 79 NV 80 (163)
Q Consensus 79 ~V 80 (163)
.|
T Consensus 98 ~V 99 (100)
T 3caf_A 98 DV 99 (100)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 326
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.15 E-value=2.5e-10 Score=70.75 Aligned_cols=81 Identities=16% Similarity=0.258 Sum_probs=53.7
Q ss_pred CceEEecCC-CcEEEEEecCC---e-eEEecceEe-cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC---C
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---H-ILTTNIYTY-TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP---K 71 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~---~ 71 (163)
|.|.+.+.+ +.|.|+|...+ . ++....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+.. .
T Consensus 21 L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~ 98 (120)
T 1mqk_L 21 ITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG--SGTQFSLKINSLLPEDFGSYYCQHHYGTPPLT 98 (120)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSSSSCC
T ss_pred EEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec--cCCEEEEEECCCCHHHCEEEEEEEEeCCCceE
Confidence 689999988 89999996422 2 222211111 1257888764 3468899999999999999999995432 2
Q ss_pred eeEEEEEEEEcC
Q psy3125 72 MNMAIMLNVDDR 83 (163)
Q Consensus 72 ~~~~~~l~V~~~ 83 (163)
....+.|.|...
T Consensus 99 fg~gt~L~V~~~ 110 (120)
T 1mqk_L 99 FGGGTKLEIKRE 110 (120)
T ss_dssp BCCCEEEEEC--
T ss_pred ECCCeEEEEecC
Confidence 334556666544
No 327
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.15 E-value=3.5e-10 Score=89.55 Aligned_cols=150 Identities=13% Similarity=0.095 Sum_probs=90.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC---CCCeeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT---EPKMNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~---~~~~~~~~ 76 (163)
|.|.+.|.| +.|.|.|.+.+... . ...++.+... ..+++.|.+..+...|.|.|.|.... ........
T Consensus 96 v~c~~~g~P~p~i~W~k~g~~~~~-~------~~~~~~i~~~-~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~ 167 (731)
T 2v5y_A 96 VYVKVNNGPLGNPIWNISGDPTRT-W------NRAELAISTF-WPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPH 167 (731)
T ss_dssp EEEEETTCCCCSEEEEECCCCCSS-C------EEEEEEECCC-TTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCE
T ss_pred EEEecCCCCccceeEEEeCCcCCc-e------eEEEEEEeec-CCCceEEEEEEEecCCceEEEEeeEEeeecccccccc
Confidence 469999999 99999984332100 0 0112222210 13456677777778888888875421 00000000
Q ss_pred EEEEEcCCCceEeeCCCeEEEecCC--CCceeEE-EE--eCCCeEEEec----CCCCceEEEEecccCcCCCeeEEEEc-
Q psy3125 77 MLNVDDRGRGARLSAGPLLNFAFPD--LLTTNIY-TY--TGDARFSVIH----PQNSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 77 ~l~V~~~~~~~~v~~~~~~~~~~~~--~~~~~~~-~~--~~~~~~~~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
.+ .+....+..|..+.+.|.. .+.+.+. |+ .++..+.... ........|.|.++++.|+|.|+|.|
T Consensus 168 ~~----~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~ 243 (731)
T 2v5y_A 168 FL----RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIR 243 (731)
T ss_dssp EC----CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEE
T ss_pred cc----cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEE
Confidence 01 1234667788899999963 3344555 66 4444332221 11123468999999999999999999
Q ss_pred CCCCC-ccEEEEEEEec
Q psy3125 147 NTEPK-MNMAIMLNVDG 162 (163)
Q Consensus 147 ~~~~~-~~~~~~L~V~~ 162 (163)
|..|. .+..+.|.|..
T Consensus 244 n~~G~~~s~~~~l~V~~ 260 (731)
T 2v5y_A 244 TEGGVGISNYAELVVKE 260 (731)
T ss_dssp ETTEEEECCCEEEEEEC
T ss_pred CCCCCcceeeEEEEEec
Confidence 88786 77778887764
No 328
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=3.3e-10 Score=69.33 Aligned_cols=70 Identities=9% Similarity=0.164 Sum_probs=51.0
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCC----------eEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDA----------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP 70 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~----------r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 70 (163)
|.|.+.+ .+.+.|+| ++..+. .+. |+.+.. +....+|.|.+++.+|+|.|+|....
T Consensus 28 f~C~vs~-~p~v~W~k--nG~~l~-------~~~~~~~~~~~~~r~~i~~--~g~~~~L~I~~v~~~D~G~Y~~~~~~-- 93 (112)
T 2e6q_A 28 FSLDLST-IIQGTWFL--NGEELK-------SNEPEGQVEPGALRYRIEQ--KGLQHRLILHAVKHQDSGALVGFSCP-- 93 (112)
T ss_dssp EEEEESS-CCCCEEEE--SSCBCC-------SSCCCTTSCTTSCEEEECC--BTTEEEEEEESCCSTTCSEEEEEEET--
T ss_pred EEEEECC-CCeEEEEE--CCEECc-------cCcccccccccccEEEEEe--CCcEEEEEECCCCHHHCccEEEEEEC--
Confidence 6899998 78899998 333332 233 888775 33577899999999999999774422
Q ss_pred CeeEEEEEEEEcCC
Q psy3125 71 KMNMAIMLNVDDRG 84 (163)
Q Consensus 71 ~~~~~~~l~V~~~~ 84 (163)
.....+.|.|..++
T Consensus 94 ~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 94 GVQDSAALTIQESS 107 (112)
T ss_dssp TEEEEEEEEEECSS
T ss_pred CeeEEEEEEEeCCC
Confidence 24567789998774
No 329
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.14 E-value=1.3e-10 Score=69.01 Aligned_cols=81 Identities=20% Similarity=0.212 Sum_probs=61.9
Q ss_pred EEcCCCceEeeCCCeEEEecCC--C-CceeEEEEeCCC------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCC
Q psy3125 80 VDDRGRGARLSAGPLLNFAFPD--L-LTTNIYTYTGDA------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 80 V~~~~~~~~v~~~~~~~~~~~~--~-~~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
|..++....+..|..+.+.|.. . +.+.+.|++++. ++.+.. ......|.|.+++.+|+|.|+|.| |..
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITY--EDGVAILYVKDITKLDDGTYRCKVVNDY 81 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEE--ETTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEE--cCCeEEEEEecCChhhCeEEEEEEECCC
Confidence 3455566778889999999963 2 567889988754 333322 123557999999999999999999 999
Q ss_pred CCccEEEEEEEec
Q psy3125 150 PKMNMAIMLNVDG 162 (163)
Q Consensus 150 ~~~~~~~~L~V~~ 162 (163)
|..+..+.|.|.+
T Consensus 82 g~~~~~~~l~V~~ 94 (97)
T 2bk8_A 82 GEDSSYAELFVKG 94 (97)
T ss_dssp CEEEEEEEEEETT
T ss_pred CeEeEEEEEEEEe
Confidence 9999999999875
No 330
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.14 E-value=4.4e-10 Score=68.15 Aligned_cols=67 Identities=19% Similarity=0.359 Sum_probs=47.6
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ +.|.|+|.... ..+....... ...+|+.+.. ..+..+|.|.+++.+|+|.|.|.+.+.
T Consensus 21 L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 93 (108)
T 1jhl_L 21 INCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG--SGTDFTLTISSLEPEDFAMYICQQHNE 93 (108)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--SSSEEEEEECSCCTTCCSEEEEEECSS
T ss_pred EEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe--cCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 689999998 99999996432 2222111111 1246888764 346789999999999999999999553
No 331
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=2.2e-10 Score=68.37 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=59.7
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC--CCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ--NSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
.+....+..|..+.+.|.. .+.+.+.|++++..+...... ......|.|.+++.+|+|.|+|.| |..|..+..+.
T Consensus 14 ~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 93 (100)
T 2edj_A 14 GPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAV 93 (100)
T ss_dssp CCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEE
T ss_pred CcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEE
Confidence 3445677788999999963 445678999887654311100 012235999999999999999999 88899999999
Q ss_pred EEEecC
Q psy3125 158 LNVDGK 163 (163)
Q Consensus 158 L~V~~~ 163 (163)
|.|..+
T Consensus 94 l~V~~~ 99 (100)
T 2edj_A 94 LDVTES 99 (100)
T ss_dssp EEEESC
T ss_pred EEEecC
Confidence 999764
No 332
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.14 E-value=1.1e-10 Score=71.99 Aligned_cols=78 Identities=15% Similarity=0.253 Sum_probs=52.7
Q ss_pred CceEEecC--C-CcEEEEEecCCeeEEe--cceE-ec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC--CC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLHILTT--NIYT-YT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT--EP 70 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~~~~~--~~~~-~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~--~~ 70 (163)
|+|.+.+. + ..|.|+|.+. .+..+ .... +. ..+|+.+.. +.+|.|.+++.+|+|.|+|++.+ .+
T Consensus 23 L~C~~~~~~~~~~~v~W~k~~~-~i~~~~~~~~~~~~~~~~~R~~~~~-----~~sL~I~~v~~~D~G~Y~C~v~~~~~g 96 (117)
T 3q0h_A 23 LQCHLSSTTAQVTQVNWEQQDQ-LLAICNADLGWHISPSFKDRVAPGP-----GLGLTLQSLTVNDTGEYFCIYHTYPDG 96 (117)
T ss_dssp ECEEEESCCCEEEEEEEEETTE-EEEEEETTTEEECCGGGTTTEEECS-----TTCEEECSCCGGGCEEEEEEEEEETTC
T ss_pred EEEEecCCCCCEEEEEEEeCCE-EEEEEECCCCceeCccccCcEEeCC-----ceEEEEeeCChhhCEEEEEEEEECCCC
Confidence 68999983 3 6899998432 22221 1111 11 145777532 56799999999999999999843 45
Q ss_pred CeeEEEEEEEEcCC
Q psy3125 71 KMNMAIMLNVDDRG 84 (163)
Q Consensus 71 ~~~~~~~l~V~~~~ 84 (163)
.....+.|.|..++
T Consensus 97 ~~~~~~~L~V~~pp 110 (117)
T 3q0h_A 97 TYTGRIFLEVLESS 110 (117)
T ss_dssp CEEEEEEEEEECC-
T ss_pred CeEEEEEEEEEccC
Confidence 66778899999875
No 333
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.14 E-value=3.2e-10 Score=69.35 Aligned_cols=83 Identities=16% Similarity=0.291 Sum_probs=52.6
Q ss_pred CceEEe-cCC-Cc----EEEEEecCCe-e-E-Eecc-eEecCCCeEEEeccCC---CCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVM-GLG-RP----VSWMRKRDLH-I-L-TTNI-YTYTGDARFSVIHPQN---SDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~-~~~-~~----v~W~k~~~~~-~-~-~~~~-~~~~~~~r~~~~~~~~---~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+. +.+ +. |.|+|.+... + + ..+. ..+...+|+.+..... .++.+|.|.+++.+|+|.|+|.+.
T Consensus 20 L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~ 99 (118)
T 3udw_C 20 LPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFV 99 (118)
T ss_dssp ECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecChHHCeEEEEEEE
Confidence 689995 444 43 9999853221 1 1 1111 1122356777765321 127889999999999999999995
Q ss_pred C--CCCeeEEEEEEEEcC
Q psy3125 68 T--EPKMNMAIMLNVDDR 83 (163)
Q Consensus 68 ~--~~~~~~~~~l~V~~~ 83 (163)
+ .+.....+.|.|.++
T Consensus 100 ~~~~~~~~~~~~L~V~~~ 117 (118)
T 3udw_C 100 TFPQGSRSVDIWLRVLAK 117 (118)
T ss_dssp EETTEEEEEEEEEEEEC-
T ss_pred ECCCCCccceEEEEEEeC
Confidence 4 345567778888765
No 334
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=99.13 E-value=4.9e-10 Score=69.02 Aligned_cols=83 Identities=24% Similarity=0.370 Sum_probs=55.4
Q ss_pred CceEEecCC--CcEEEEEecCCe----eEEe-cc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLH----ILTT-NI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK- 71 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~----~~~~-~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~- 71 (163)
|.|.+.... ..|.|+|+..+. ++.. .. ......+||.+..+...+.++|.|.+++.+|+|.|.|.+.....
T Consensus 19 L~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~ 98 (117)
T 3bp6_A 19 FTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPK 98 (117)
T ss_dssp EEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECSSS
T ss_pred EEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHHCEEEEEEEEecCCc
Confidence 579998754 789999974321 2221 11 12334689998765556789999999999999999999954221
Q ss_pred ----eeEEEEEEEEcC
Q psy3125 72 ----MNMAIMLNVDDR 83 (163)
Q Consensus 72 ----~~~~~~l~V~~~ 83 (163)
....+.|.|.+.
T Consensus 99 ~~~~~~~~t~L~V~~~ 114 (117)
T 3bp6_A 99 LKIEESPGAELVVTER 114 (117)
T ss_dssp CEEEECCCEEEEEC--
T ss_pred cccccCCcEEEEEEhH
Confidence 234556666544
No 335
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.13 E-value=1.4e-10 Score=70.17 Aligned_cols=69 Identities=20% Similarity=0.415 Sum_probs=50.1
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEEEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLNV 80 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V 80 (163)
|.|.+.+. +.|.|+|. +. . +..+.|+.+.. .....+|.|.+++.+|+|.|+|.+.+ ....+.|.|
T Consensus 28 l~C~~~~~-p~v~W~k~-~~-~-------~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~~~l~V 92 (108)
T 2dm7_A 28 LQCELSKV-APVEWKKG-PE-T-------LRDGGRYSLKQ--DGTRCELQIHDLSVADAGEYSCMCGQ---ERTSATLTV 92 (108)
T ss_dssp EEEEBSSS-CCCEEESS-SS-B-------CCSSSSCEEEE--ETTEEEEEESSCCTTTCSEEEEEETT---EEEEEECEE
T ss_pred EEEEeCCC-CeeEEEEC-CE-E-------CCCCCCEEEEe--cCCEEEEEECCCCcccCEEEEEEEcC---CEEEEEEEE
Confidence 57988765 78999972 22 1 22456777765 23577899999999999999999933 456677888
Q ss_pred EcCC
Q psy3125 81 DDRG 84 (163)
Q Consensus 81 ~~~~ 84 (163)
..++
T Consensus 93 ~~~p 96 (108)
T 2dm7_A 93 RALP 96 (108)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 7754
No 336
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.13 E-value=4.9e-10 Score=65.96 Aligned_cols=76 Identities=21% Similarity=0.188 Sum_probs=57.4
Q ss_pred CCceEeeCCCeEEEecC--CCCceeEEEEeCC--CeE----EEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccE
Q psy3125 84 GRGARLSAGPLLNFAFP--DLLTTNIYTYTGD--ARF----SVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNM 154 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~ 154 (163)
+....+..|..+.+.|. ..+.+.+.|++++ ..+ .+.. ......|.|.+++.+|+|.|+|.| |..|..+.
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~ 86 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDA--KSSTTSIFFPSAKRADSGNYKLKVKNELGEDEA 86 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEE--ETTEEEEECTTBCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEe--cCCEEEEEECCCChhcCEEEEEEEEcCCCeEEE
Confidence 34456777888888885 4556788999888 432 1111 123567999999999999999999 99999999
Q ss_pred EEEEEEe
Q psy3125 155 AIMLNVD 161 (163)
Q Consensus 155 ~~~L~V~ 161 (163)
.+.|.|+
T Consensus 87 ~~~l~V~ 93 (93)
T 1wit_A 87 IFEVIVQ 93 (93)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999884
No 337
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.3e-10 Score=69.75 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=56.6
Q ss_pred CCceEeeCCCeEEEecCCCCceeEEEEeCCC------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 84 GRGARLSAGPLLNFAFPDLLTTNIYTYTGDA------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
+....+..|..+.+.|...+.+.+.|++++. ++.+.. ......|.|.+++.+|+|.|+|.| |. ..+.++
T Consensus 14 ~~~~~v~~G~~v~l~C~v~p~p~v~W~k~g~~l~~~~r~~i~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a 89 (100)
T 2yuz_A 14 LTDQTVNLGKEICLKCEISENIPGKWTKNGLPVQESDRLKVVQ--KGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPA 89 (100)
T ss_dssp CCCEEEETTSCCCEEEECSSCCCEEEEETTEECCCCSSEEEEE--CSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEE
T ss_pred CCceEEcCCCCEEEEEEeCCCCeEEEEECCEECCCCCcEEEEE--eCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEE
Confidence 3456677888888988765556788998764 333332 234567999999999999999999 65 678889
Q ss_pred EEEEec
Q psy3125 157 MLNVDG 162 (163)
Q Consensus 157 ~L~V~~ 162 (163)
.|.|..
T Consensus 90 ~L~V~~ 95 (100)
T 2yuz_A 90 KVHVIS 95 (100)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 998875
No 338
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.12 E-value=9.2e-10 Score=66.27 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=55.6
Q ss_pred CceEeeCCCeEEEecCC--CCceeEEEEeCCC--------------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-C
Q psy3125 85 RGARLSAGPLLNFAFPD--LLTTNIYTYTGDA--------------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-N 147 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~ 147 (163)
....+..|..+.+.|.. .+...+.|++.+. |+.+... ......|.|.+++.+|+|.|+|.| +
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~~~n 92 (108)
T 3m45_A 14 QNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRA-SWHELSISVSDVSLSDEGQYTCSLFT 92 (108)
T ss_dssp CCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEE-SSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred CeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeec-CCCcEEEEECCCChhHCeEEEEEEEc
Confidence 34567778888888853 2345677876654 3333221 124678999999999999999999 7
Q ss_pred CCCCccEEEEEEEec
Q psy3125 148 TEPKMNMAIMLNVDG 162 (163)
Q Consensus 148 ~~~~~~~~~~L~V~~ 162 (163)
.+..+..+.|.|.+
T Consensus 93 -~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 93 -MPVKTSKAYLTVLG 106 (108)
T ss_dssp -SSCEEEEEEEEEEC
T ss_pred -CCCcEEEEEEEEEc
Confidence 88889999999975
No 339
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=99.12 E-value=3.2e-10 Score=70.65 Aligned_cols=84 Identities=15% Similarity=0.231 Sum_probs=56.8
Q ss_pred CceEEecCC--CcEEEEEecCC----eeEEecc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-Ce
Q psy3125 1 MACTVMGLG--RPVSWMRKRDL----HILTTNI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-KM 72 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~----~~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~~ 72 (163)
|+|.+.... ..+.|+|.... .++...+ ......+||.+..+...+.++|.|.+++.+|+|.|.|.+.... ..
T Consensus 22 L~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~~~~~~~~~ 101 (124)
T 2nms_A 22 VQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDL 101 (124)
T ss_dssp EEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCCc
Confidence 579988654 46999996432 2222211 1111357888876545678999999999999999999995432 34
Q ss_pred eEEEEEEEEcCC
Q psy3125 73 NMAIMLNVDDRG 84 (163)
Q Consensus 73 ~~~~~l~V~~~~ 84 (163)
...+.|.|..++
T Consensus 102 ~~~v~L~V~~~~ 113 (124)
T 2nms_A 102 GVTVQVTIDPAP 113 (124)
T ss_dssp EEEEEEEEECCC
T ss_pred cEEEEEEEeCCC
Confidence 456778877664
No 340
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.12 E-value=2.1e-10 Score=76.23 Aligned_cols=71 Identities=17% Similarity=0.301 Sum_probs=53.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcc-cCcCCCeeEEEEe-eCCCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDY-AQKRDAGIYECQV-NTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~~-~~~~~~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++.. +...+++.+.. .....+|.|.+ ++.+|+|.|+|.+ +..+..+..+.
T Consensus 124 l~C~~~g~p~p~i~W~~--~~~~-------~~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 192 (197)
T 2j8h_A 124 IKIPFSGKPDPVITWQK--GQDL-------IDNNGHYQVIV--TRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192 (197)
T ss_dssp EEEEEEEESCCEEEEEE--SSCE-------ECSSSSCEEEE--CSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEecCCCcEEEEE--CCEE-------eecCCCEEEEE--cCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEE
Confidence 579999999 9999998 3222 23456776654 23577899999 9999999999999 55566677777
Q ss_pred EEEEc
Q psy3125 78 LNVDD 82 (163)
Q Consensus 78 l~V~~ 82 (163)
|.|.+
T Consensus 193 l~V~d 197 (197)
T 2j8h_A 193 LDVAD 197 (197)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77753
No 341
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=99.12 E-value=7.3e-11 Score=74.23 Aligned_cols=84 Identities=19% Similarity=0.230 Sum_probs=54.0
Q ss_pred CceEEe-------cCC-CcEEEEEecCCe----eEEecce----EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEE
Q psy3125 1 MACTVM-------GLG-RPVSWMRKRDLH----ILTTNIY----TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 64 (163)
Q Consensus 1 l~C~~~-------~~~-~~v~W~k~~~~~----~~~~~~~----~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 64 (163)
|+|.+. +.. ..|.|+|..... ++...+. .....+|+.+..+...++++|.|.+++.+|+|.|.|
T Consensus 26 L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 105 (132)
T 1nko_A 26 VRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAGRYFF 105 (132)
T ss_dssp ECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEECSCCGGGCEEEEE
T ss_pred EEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEEcccCcccCeeEEE
Confidence 689998 334 889999964321 2222211 011247999876433567899999999999999999
Q ss_pred EeeCCC-Ce---eEEEEEEEEcCC
Q psy3125 65 QVNTEP-KM---NMAIMLNVDDRG 84 (163)
Q Consensus 65 ~~~~~~-~~---~~~~~l~V~~~~ 84 (163)
.+.... .. ...+.|.|.+.+
T Consensus 106 ~v~~~~~~~~~~~~~~~l~V~~~~ 129 (132)
T 1nko_A 106 RMEKGNIKWNYKYDQLSVNVTALT 129 (132)
T ss_dssp EEEETTEEEECTTSCEEEEEECCC
T ss_pred EEEcCCCcccccCCceEEEecccC
Confidence 995443 11 235667777654
No 342
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.12 E-value=6.6e-11 Score=80.08 Aligned_cols=66 Identities=23% Similarity=0.411 Sum_probs=47.0
Q ss_pred CceEEecC-C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEE
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~ 77 (163)
|.|.+.+. | +.|.|+| ++..+. .+.|+.. ..+..+|.|.+++.+|+|.|+|.+ |..+.....+.
T Consensus 136 l~C~v~g~~P~p~i~W~k--~g~~l~-------~~~~~~~----~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 202 (207)
T 3rbs_A 136 LKCKVANIKKETHIVWYK--DEREIS-------VDEKHDF----KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 202 (207)
T ss_dssp EEEEEESCCTTCEEEEEE--TTEEEC-------CCCCCCC----SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEeCCCCCCEEEEEE--CCEECC-------CCCceEc----CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEE
Confidence 68999998 8 9999998 333332 2334321 123567999999999999999999 55556666655
Q ss_pred EE
Q psy3125 78 LN 79 (163)
Q Consensus 78 l~ 79 (163)
|.
T Consensus 203 L~ 204 (207)
T 3rbs_A 203 LV 204 (207)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 343
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.11 E-value=3.3e-09 Score=80.89 Aligned_cols=151 Identities=11% Similarity=0.113 Sum_probs=84.7
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEec----ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-Ce
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTTN----IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-KM 72 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~~ 72 (163)
|.|.+.+.. ..|.|+| ++..+..+ ......+++|... .+|.|..+..+|.|.|+|++.+.. ..
T Consensus 317 L~C~v~g~~P~~~~i~W~k--~g~~~~~~~~~~~~~~~~~gt~~~~-------s~L~i~~~~~~d~g~y~C~a~n~~~~~ 387 (512)
T 1zvo_C 317 FTCFVVGSDLKDAHLTWEV--AGKVPTGGVEEGLLERHSNGSQSQH-------SRLTLPRSLWNAGTSVTCTLNHPSLPP 387 (512)
T ss_pred EEEEEeceECCCeEEEEEE--CCEeccCceeccceecCCCCeEEEE-------EEEEEchHHhcCCCeEEEEEEeCCCCC
Confidence 679999863 4899998 33222101 0111123344332 359999999999999999995432 11
Q ss_pred eEEEEEE-EEc----CCCceEee----CCCeEE-EecCCC----CceeEEEEeCCCeEEEec--------CCCCc----e
Q psy3125 73 NMAIMLN-VDD----RGRGARLS----AGPLLN-FAFPDL----LTTNIYTYTGDARFSVIH--------PQNSD----E 126 (163)
Q Consensus 73 ~~~~~l~-V~~----~~~~~~v~----~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~--------~~~~~----~ 126 (163)
. ...+. +.. .++.+.+. .+..+. +.|... ....+.|.+++..+.... ...+. .
T Consensus 388 ~-~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~ 466 (512)
T 1zvo_C 388 Q-RLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAW 466 (512)
T ss_pred C-ceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEE
Confidence 1 11221 111 11222222 355566 888632 224578988866442110 11111 2
Q ss_pred EEEEecccCcCCCeeEEEEc-CCCC--CccEEEEEEEe
Q psy3125 127 WNMKIDYAQKRDAGIYECQV-NTEP--KMNMAIMLNVD 161 (163)
Q Consensus 127 ~~L~i~~v~~~D~G~Y~C~a-~~~~--~~~~~~~L~V~ 161 (163)
..|.|.....+|+|.|+|.| +... .......|+|.
T Consensus 467 s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~ 504 (512)
T 1zvo_C 467 SVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVS 504 (512)
T ss_pred EEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEec
Confidence 45888888888899999999 5543 34455556553
No 344
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.11 E-value=6.3e-11 Score=72.18 Aligned_cols=69 Identities=20% Similarity=0.335 Sum_probs=46.8
Q ss_pred CceEEecCC--CcEEEEEecCCe----eEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLH----ILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~----~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.... ..|.|+|..... ++..........+|+.+......+.++|.|.+++.+|+|.|.|.+...
T Consensus 16 L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~~ 90 (110)
T 2q87_A 16 VQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTP 90 (110)
T ss_dssp EEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECT
T ss_pred EEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEEEEEEEecC
Confidence 579987653 689999854321 222111100135788887543456889999999999999999999654
No 345
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.11 E-value=2.4e-10 Score=67.91 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=59.0
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCe--------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCC
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR--------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPK 151 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~ 151 (163)
.+....+..|..+.+.|.. .+.+.+.|++++.. +.+.. ......|.|.+++.+|+|.|+|.| |..+.
T Consensus 11 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 88 (100)
T 3irg_A 11 LPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN--TDDLTTLIIMDVQKQDGGLYTLSLGNEFGS 88 (100)
T ss_dssp CCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE--CSSEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEe--cCCEEEEEEeecCcccCEEEEEEEEeCCCc
Confidence 3445667788889998863 34567889886543 22222 133567999999999999999999 88899
Q ss_pred ccEEEEEEEec
Q psy3125 152 MNMAIMLNVDG 162 (163)
Q Consensus 152 ~~~~~~L~V~~ 162 (163)
.+..+.|.|++
T Consensus 89 ~~~~~~l~V~~ 99 (100)
T 3irg_A 89 DSATVNIHIRS 99 (100)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEEe
Confidence 99999999975
No 346
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=99.10 E-value=6.8e-10 Score=68.98 Aligned_cols=80 Identities=13% Similarity=0.322 Sum_probs=53.2
Q ss_pred CceEEecC--C-CcEEEEEecCC----eeEEec-ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL----HILTTN-IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-- 70 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~----~~~~~~-~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-- 70 (163)
|+|.+... . ..+.|+|...+ .++... .......+||.+......+.++|.|.+++.+|+|.|.|.+...+
T Consensus 30 L~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Dsg~Y~C~v~~~~~~ 109 (122)
T 1hkf_A 30 VRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDN 109 (122)
T ss_dssp EEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECTTTC
T ss_pred EEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHHHCEEEEEEEEcCCCC
Confidence 57998754 2 68999996432 223222 22223457999865555678999999999999999999996533
Q ss_pred CeeEEEEEEE
Q psy3125 71 KMNMAIMLNV 80 (163)
Q Consensus 71 ~~~~~~~l~V 80 (163)
.....+.|.+
T Consensus 110 ~~~~~~~l~L 119 (122)
T 1hkf_A 110 SVSKSVRFYL 119 (122)
T ss_dssp CEEEEEEEEE
T ss_pred cccccEEEEE
Confidence 3344444443
No 347
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.10 E-value=6.5e-10 Score=67.54 Aligned_cols=66 Identities=17% Similarity=0.266 Sum_probs=47.1
Q ss_pred CceEEecCC-CcEEEEEecCC---e-eEEecceEe-cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---H-ILTTNIYTY-TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ +.|.|+|.... . ++....... ...+||.+.. ..+..+|.|.+++.+|+|.|.|.+.+
T Consensus 23 L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 94 (109)
T 2q20_A 23 ITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG--SGTDFTFTISSLQPEDIATYYCQQYD 94 (109)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec--cCCEEEEEECCCChhhCEEEEEEEee
Confidence 689999888 89999996532 1 222111111 1256888764 34688999999999999999999954
No 348
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=99.10 E-value=2.4e-10 Score=70.08 Aligned_cols=83 Identities=22% Similarity=0.337 Sum_probs=54.8
Q ss_pred CceEEecC--C-CcEEEEEecC------CeeEEecce--EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRD------LHILTTNIY--TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~------~~~~~~~~~--~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|+|.+... . ..|.|+|... ..++...+. .....+||.+......++++|.|.+++.+|+|.|.|.+...
T Consensus 17 L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~v~~~ 96 (115)
T 2or7_A 17 LPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYCCVVEIP 96 (115)
T ss_dssp ECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGGCEEEEEEECCT
T ss_pred EEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCHHHCEEEEEEEECC
Confidence 57888753 3 7899998541 333332221 22346788876543446789999999999999999999653
Q ss_pred CC-eeEEEEEEEEcC
Q psy3125 70 PK-MNMAIMLNVDDR 83 (163)
Q Consensus 70 ~~-~~~~~~l~V~~~ 83 (163)
+. ....+.|.|...
T Consensus 97 ~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 97 GAFHFVDYMLEVKPE 111 (115)
T ss_dssp TSCEEEEEEEEEESC
T ss_pred CceeEEEEEEEEcCC
Confidence 32 355556666544
No 349
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.09 E-value=3.2e-11 Score=74.76 Aligned_cols=76 Identities=17% Similarity=0.313 Sum_probs=51.9
Q ss_pred CceEEecCC-Cc-EEEEEecCCeeEEecceEecCCCeEEEeccCCCC--eEEEEEcccCcCCC-eeEEEEe-eCCCCeeE
Q psy3125 1 MACTVMGLG-RP-VSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSD--EWNMKIDYAQKRDA-GIYECQV-NTEPKMNM 74 (163)
Q Consensus 1 l~C~~~~~~-~~-v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~~~L~i~~v~~~D~-G~Y~C~~-~~~~~~~~ 74 (163)
|.|.+.+.| +. |.|+| +...+..+ .++|+.+......+ ..+|.|.+++.+|. |.|+|.+ |..+....
T Consensus 33 l~C~~~g~P~p~~i~W~~--~~~~l~~~-----~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~ 105 (122)
T 2cry_A 33 IKCFIRSTPPPDRIAWSW--KENVLESG-----TSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTE 105 (122)
T ss_dssp CCEEECCSSCCSEEEEES--SSCEECSE-----EETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEE
T ss_pred EEEEEeecCCCcEeEEEE--CCEEccCC-----CCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEE
Confidence 689999999 77 99997 32222211 13567664211122 55899999999999 9999999 44566666
Q ss_pred EEEEEEEcC
Q psy3125 75 AIMLNVDDR 83 (163)
Q Consensus 75 ~~~l~V~~~ 83 (163)
.+.|.|.++
T Consensus 106 ~~~l~V~~~ 114 (122)
T 2cry_A 106 IIRLKEQGS 114 (122)
T ss_dssp EECCCCSCS
T ss_pred EEEEEECCC
Confidence 666766654
No 350
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=99.09 E-value=1.4e-09 Score=68.64 Aligned_cols=83 Identities=23% Similarity=0.356 Sum_probs=56.6
Q ss_pred CceEEecCC--CcEEEEEecCC----eeEEec-c-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-
Q psy3125 1 MACTVMGLG--RPVSWMRKRDL----HILTTN-I-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK- 71 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~----~~~~~~-~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~- 71 (163)
|.|.+.... ..|.|+|+..+ .++... . ......+||.+..+...+.++|.|.+++.+|+|.|.|.+.....
T Consensus 29 L~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~ 108 (134)
T 3bik_B 29 FTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPK 108 (134)
T ss_dssp EEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGGGCEEEEEEEEECSSS
T ss_pred EEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeCCCC
Confidence 579998654 78999997432 122211 1 12234689998754456789999999999999999999954221
Q ss_pred ----eeEEEEEEEEcC
Q psy3125 72 ----MNMAIMLNVDDR 83 (163)
Q Consensus 72 ----~~~~~~l~V~~~ 83 (163)
....+.|.|.+.
T Consensus 109 ~~~~~~~gt~L~V~~~ 124 (134)
T 3bik_B 109 AKIEESPGAELVVTER 124 (134)
T ss_dssp CEEEECCCEEEEEECC
T ss_pred ceEEEcCCEEEEEeCC
Confidence 234567777765
No 351
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.09 E-value=1e-09 Score=65.09 Aligned_cols=79 Identities=14% Similarity=0.291 Sum_probs=59.6
Q ss_pred cCCCceEeeCCCeEEEecCC--CCceeEEEEeCCC------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCc
Q psy3125 82 DRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDA------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKM 152 (163)
Q Consensus 82 ~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~ 152 (163)
..+....+..|..+.+.|.. .+.+.+.|++++. ++.+.. ......|.|.+++.+|+|.|+|.| |..|..
T Consensus 11 ~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 88 (99)
T 3puc_A 11 TGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSE--DKGGFFLEIHKTDTSDSGLYTCTVKNSAGSV 88 (99)
T ss_dssp ECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEE--eCCEEEEEECCCCcccCEEEEEEEEeCCCcE
Confidence 33445677888889999863 3446788988654 233222 123457999999999999999999 888999
Q ss_pred cEEEEEEEec
Q psy3125 153 NMAIMLNVDG 162 (163)
Q Consensus 153 ~~~~~L~V~~ 162 (163)
+..+.|.|++
T Consensus 89 ~~~~~l~V~~ 98 (99)
T 3puc_A 89 SSSCKLTIKA 98 (99)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEEEEe
Confidence 9999999976
No 352
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.09 E-value=9.7e-10 Score=67.95 Aligned_cols=80 Identities=16% Similarity=0.274 Sum_probs=52.6
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC--e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK--M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~--~ 72 (163)
|.|.+.+.+ +.|.|+|.... ..+....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+... .
T Consensus 23 L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~f 100 (119)
T 2e27_L 23 ITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG--SGRDYSFSISNLEPEDAATYYCLQYDNFTWTF 100 (119)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEECGGGCCEE
T ss_pred EEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc--cCCEEEEEECCCChHHCEEEEEEEccCCceEE
Confidence 689999988 99999996422 2222111111 1257888764 34688999999999999999999954221 2
Q ss_pred eEEEEEEEEc
Q psy3125 73 NMAIMLNVDD 82 (163)
Q Consensus 73 ~~~~~l~V~~ 82 (163)
...+.|.|..
T Consensus 101 g~GT~l~v~~ 110 (119)
T 2e27_L 101 GGGTKLEIKR 110 (119)
T ss_dssp CCCEEEEEEC
T ss_pred CCCEEEEEeC
Confidence 2344455544
No 353
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.08 E-value=3.5e-10 Score=68.43 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=60.9
Q ss_pred EEcCCCceEeeCCCeEEEecCC--CCceeEEEEeCCC------eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 80 VDDRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDA------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 80 V~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
+...+....+..|..+.+.|.. .+.+.+.|++++. ++.+.. ......|.|.+++.+|+|.|+|.| |..|
T Consensus 17 i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 94 (106)
T 1nct_A 17 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTT--TKYKSTFEISSVQASDEGNYSVVVENSEG 94 (106)
T ss_dssp EEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEE--CSSEEEEEECCCCSSCCSEEEECCBCSSC
T ss_pred EEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEE--CCCEEEEEECcCCchhCEEEEEEEEeCCC
Confidence 3445556778888889999863 4556788887654 333332 123568999999999999999999 8889
Q ss_pred CccEEEEEEEe
Q psy3125 151 KMNMAIMLNVD 161 (163)
Q Consensus 151 ~~~~~~~L~V~ 161 (163)
..+..+.|.|.
T Consensus 95 ~~~~~~~l~V~ 105 (106)
T 1nct_A 95 KQEAEFTLTIQ 105 (106)
T ss_dssp BCCEEEEEEEC
T ss_pred eEEEEEEEEEE
Confidence 99999999986
No 354
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.7e-10 Score=68.66 Aligned_cols=80 Identities=13% Similarity=0.121 Sum_probs=59.5
Q ss_pred cCCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecC-CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEE
Q psy3125 82 DRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHP-QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 157 (163)
Q Consensus 82 ~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~ 157 (163)
..+....+..|..+.+.|.. .+.+.+.|++++..+..... .......|.|.+++.+|+|.|+|.| |..|..+..+.
T Consensus 16 ~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 95 (99)
T 2yr3_A 16 SVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAW 95 (99)
T ss_dssp ECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECC
T ss_pred ecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEE
Confidence 34456678889999999964 34567899988764421110 1123567999999999999999999 88899999988
Q ss_pred EEEe
Q psy3125 158 LNVD 161 (163)
Q Consensus 158 L~V~ 161 (163)
|.|+
T Consensus 96 l~V~ 99 (99)
T 2yr3_A 96 VTVH 99 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8874
No 355
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.08 E-value=7.8e-10 Score=70.85 Aligned_cols=82 Identities=15% Similarity=0.289 Sum_probs=53.7
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC--e
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK--M 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~--~ 72 (163)
|.|.+.+.+ +.|.|+|.... ..+........ ..+||.+.. ....++|.|.+++.+|+|.|.|.+.+... .
T Consensus 36 L~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~f 113 (146)
T 2yc1_B 36 LSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSG--SGTDFTLTISSLEPEDFAIYYCQQYRYSPRTF 113 (146)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECSSSSCEE
T ss_pred EEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEec--CCCEEEEEECCCCHHHCEEEEEEEecCCCCeE
Confidence 689999887 89999996532 22222211111 246888864 34688999999999999999999954322 2
Q ss_pred eEEEEEEEEcCC
Q psy3125 73 NMAIMLNVDDRG 84 (163)
Q Consensus 73 ~~~~~l~V~~~~ 84 (163)
...+.|.|..+.
T Consensus 114 g~GT~L~V~~~~ 125 (146)
T 2yc1_B 114 GQGTKVEIKRAA 125 (146)
T ss_dssp CCCEEEEEC---
T ss_pred CCCEEEEEeCCc
Confidence 344567776553
No 356
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.08 E-value=3.4e-09 Score=71.87 Aligned_cols=142 Identities=12% Similarity=0.127 Sum_probs=81.4
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEe--cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC----C
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTT--NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE----P 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~----~ 70 (163)
|.|.+.+.. ..|.|+|+..+ ..+.. ........+||.+..+...+.++|.|.+++.+|+|.|.|.+... .
T Consensus 23 L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~ 102 (210)
T 2eys_A 23 LQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSDSASYICVVSDRGSTLG 102 (210)
T ss_dssp EEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEESCSSTTC
T ss_pred EEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcccCceEEEEEEccCCCcc
Confidence 579998877 88999996532 22221 21111236799987655567899999999999999999999642 1
Q ss_pred C--eeEEEEEEEEcCC--Cce--EeeCC--CeEEEecCC--C-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCC
Q psy3125 71 K--MNMAIMLNVDDRG--RGA--RLSAG--PLLNFAFPD--L-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDA 139 (163)
Q Consensus 71 ~--~~~~~~l~V~~~~--~~~--~v~~~--~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 139 (163)
. ....+.|.|.... ..+ .+... ..+.+.|.. . +...+.+ ..+..... .....|.+..+...|.
T Consensus 103 ~~~fg~gt~L~V~~~~~~~~P~V~~~~~~~~~~tl~Cl~~gf~P~~~v~~-~~~~~~~~-----t~~~~l~~~~~~~~~~ 176 (210)
T 2eys_A 103 RLYFGRGTQLTVWPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQ-SKDSDVYI-----TDKCVLDMRSMDFKSN 176 (210)
T ss_dssp CEEECCCEEEEEECCCSSCCCEEEEECCCSSSSCEEEEEESCCTTCCCCC-CSSTTEEE-----CCCEEEEETTTTEEEE
T ss_pred cceECCCEEEEEECCCCCCCCeEEecCCCCCCceEEEEcccccCCcEecc-ccCcceEc-----cCchhcchhccccccc
Confidence 1 1234567776531 122 22111 122334421 0 1111100 00000000 1223588888999999
Q ss_pred eeEEEEc-CC
Q psy3125 140 GIYECQV-NT 148 (163)
Q Consensus 140 G~Y~C~a-~~ 148 (163)
|.|.|.+ +.
T Consensus 177 ~~~~w~~~~~ 186 (210)
T 2eys_A 177 SAVAWSNKSD 186 (210)
T ss_dssp EEEEEECSTT
T ss_pred chhhccCCCc
Confidence 9999998 54
No 357
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.08 E-value=1.1e-09 Score=80.50 Aligned_cols=140 Identities=10% Similarity=0.099 Sum_probs=79.5
Q ss_pred CceEEecC---C--CcEEEEEecCCeeEEe-c-ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-e
Q psy3125 1 MACTVMGL---G--RPVSWMRKRDLHILTT-N-IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK-M 72 (163)
Q Consensus 1 l~C~~~~~---~--~~v~W~k~~~~~~~~~-~-~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-~ 72 (163)
|.|.+.+. | ..|.|+|.+ +.+... . ......+++|. ...+|.|.+++.+|+|.|+|++.+... .
T Consensus 188 L~C~~~g~~P~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~-------~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 188 VTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTQPREEQFNSTFR-------SVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred EEEEEeccccCCCccEEEEEECC-ccccCcccCCCCcccCCcEE-------EEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 67999987 4 479999854 222110 0 00001122222 234699999999999999999965322 2
Q ss_pred eEEEEE----EEEcCCCceEe-------eCCCeEEEecCCC----CceeEEEEeCCCeEEEe------cCCC---CceEE
Q psy3125 73 NMAIML----NVDDRGRGARL-------SAGPLLNFAFPDL----LTTNIYTYTGDARFSVI------HPQN---SDEWN 128 (163)
Q Consensus 73 ~~~~~l----~V~~~~~~~~v-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~---~~~~~ 128 (163)
.....+ .+..++ .+.+ ..+..+.+.|... ....+.|++++..+... .... .....
T Consensus 260 ~~~~~v~~~~~~~~~P-~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~ 338 (376)
T 2aty_A 260 PIEKTISKTKGRPKAP-QLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSK 338 (376)
T ss_pred ceEEEEcCCCCCCcCC-eEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEE
Confidence 221222 122222 2222 2355678888642 24578898887543110 0111 11345
Q ss_pred EEecccCcCCCeeEEEEc-CCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
|.|.....+|.|.|+|.| +..
T Consensus 339 L~i~~~~~~~~~~YtC~v~h~~ 360 (376)
T 2aty_A 339 LNVQKSNWEAGNTFTCSVLHEG 360 (376)
T ss_pred EEEcHHHhCCCCcEEEEEEeCC
Confidence 888888888999999999 543
No 358
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.07 E-value=5e-10 Score=66.56 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=44.6
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEE
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~ 77 (163)
|.|.+. +.| +.|.|+|.+.... .. +.. .. +.+|.|.+++.+|+|.|+|.+.+ .+.....+.
T Consensus 30 l~C~~~~~~p~~~v~W~k~~~~~~---------~~-~~~-~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 93 (98)
T 1gl4_B 30 FICTAKSKSPAYTLVWTRLHNGKL---------PS-RAM-DF-----NGILTIRNVQPSDAGTYVCTGSNMFAMDQGTAT 93 (98)
T ss_dssp EEEEEEESSSCCEEEEEEGGGBCC---------CT-TEE-EE-----TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEeCCCCCCCcEEEEEeCCCCCC---------Cc-eee-cC-----CCEEEEeCCChhhCEEEEEEecCCCCccccEEE
Confidence 579999 678 9999998422211 11 111 11 23699999999999999999944 455666666
Q ss_pred EEEE
Q psy3125 78 LNVD 81 (163)
Q Consensus 78 l~V~ 81 (163)
|.|.
T Consensus 94 l~V~ 97 (98)
T 1gl4_B 94 LHVQ 97 (98)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7664
No 359
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.07 E-value=7.8e-10 Score=67.72 Aligned_cols=65 Identities=17% Similarity=0.386 Sum_probs=46.5
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|......+. ..+..++||.+..+.....++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~g~~~~---~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (113)
T 1sq2_N 20 INCVLRDASYALGSTCWYRKKSGEGNE---ESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGLGV 87 (113)
T ss_dssp EEEEECSCSSCCCCEEEEEEETTSCCC---EECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECB
T ss_pred EEEEECCCcCCCCEEEEEEeCCCCCce---EeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 689998764 689999964321110 01123578887654445689999999999999999999954
No 360
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.07 E-value=5.6e-10 Score=67.73 Aligned_cols=65 Identities=18% Similarity=0.349 Sum_probs=46.3
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.. +.|.|+|......+. ..+...+||.+..+.....++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 20 INCVLRDTACALDSTNWYRTKLGSTKE---QTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp EEEEECCSSEEEEEEEEEEEETTCCCE---EECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEeEeCCCcCCCCEEEEEEcCCCCCcE---EEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 689998763 789999964322110 01123578887654345689999999999999999999953
No 361
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=99.07 E-value=1e-09 Score=67.38 Aligned_cols=83 Identities=13% Similarity=0.370 Sum_probs=55.4
Q ss_pred CceEEec-C-C-CcEEEEEec-CC-----eeEEecc--eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMG-L-G-RPVSWMRKR-DL-----HILTTNI--YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~-~-~-~~v~W~k~~-~~-----~~~~~~~--~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|+|.+.. . . ..|.|+|.. .. .++...+ ......+|+.+..+...++++|.|.+++.+|+|.|.|.+...
T Consensus 16 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~v~~~ 95 (116)
T 3bia_X 16 LPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNRGDSGVYCCRIEVP 95 (116)
T ss_dssp ECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCChhHCEEEEEEEEcC
Confidence 5788873 2 3 569999965 32 2232221 223345688876544456889999999999999999999643
Q ss_pred C---CeeEEEEEEEEcC
Q psy3125 70 P---KMNMAIMLNVDDR 83 (163)
Q Consensus 70 ~---~~~~~~~l~V~~~ 83 (163)
+ .....+.|.|..+
T Consensus 96 ~~~~~~~~~v~L~V~~~ 112 (116)
T 3bia_X 96 GWFNDVKKNVRLELRRA 112 (116)
T ss_dssp SSSCCEEEEEEEEEECC
T ss_pred CcccceEEEEEEEEecC
Confidence 3 2345667777665
No 362
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.07 E-value=1e-09 Score=66.43 Aligned_cols=66 Identities=18% Similarity=0.304 Sum_probs=47.0
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|...+ ..+........ ..+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 92 (107)
T 1i8k_A 21 IRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG--TGTDFVFTIENTLSEDVGDYYCLQSF 92 (107)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc--cCCEEEEEECCCCHHHCEEEEEEEee
Confidence 689999887 89999996421 22221111111 256888764 34688999999999999999999954
No 363
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.06 E-value=3.9e-10 Score=78.90 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=50.0
Q ss_pred cCcCCCeeEEEEeeC-CCCeeEEEEEEEEcCCCceEeeCCCeEEEecCCC-CceeEEEEeCC--C---------------
Q psy3125 54 AQKRDAGIYECQVNT-EPKMNMAIMLNVDDRGRGARLSAGPLLNFAFPDL-LTTNIYTYTGD--A--------------- 114 (163)
Q Consensus 54 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~--~--------------- 114 (163)
.+++|.+.|.|++.+ .+.......+.|..++..+.+..|..+.+.|... ....+.|++.. .
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~ 82 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVIQTPRYLVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFKFLINFQNQEVLQ 82 (270)
T ss_dssp -------------------------CCCEEECSEEEEETTSCEEEEEECCTTCCEEEEEEECTTCCEEEEEEEETTEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeEEeCCCeEEEcCCCCEEEEEEecCCCceEEEEEECCCCCcEEEEEECCCCcee
Confidence 467899999999943 3333334445666666677888999999999642 34577887621 1
Q ss_pred -------eEEEecCCCCceEEEEecccCcCCCeeEEEEc
Q psy3125 115 -------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV 146 (163)
Q Consensus 115 -------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 146 (163)
|+.+.. ......+|.|.+++.+|+|.|+|.+
T Consensus 83 ~~~~~~~r~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~~ 120 (270)
T 3qib_D 83 QIDMTEKRFSAEC-PSNSPCSLEIQSSEAGDSALYLCAS 120 (270)
T ss_dssp ECHHHHHHEEEEC-CTTSCEEEEESSCCGGGCEEEEEEE
T ss_pred cCCccCCcEEEEe-CCCcEEEEEECCCCHhHCeEEEEEE
Confidence 444433 2344678999999999999999999
No 364
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.06 E-value=5.4e-10 Score=67.80 Aligned_cols=66 Identities=18% Similarity=0.309 Sum_probs=46.4
Q ss_pred CceEEecCC-CcEEEEEecCC---eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.... ..+....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 92 (108)
T 1qfw_M 21 LSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSG--SATDFTLTISSVQAEDFADYHCGQTY 92 (108)
T ss_dssp EEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCB--CSSEEEEEESSCCTTCCSEEEEEECS
T ss_pred EEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEc--CCCEEEEEECCCChhhCEEEEEEEcc
Confidence 689999888 89999986432 2222111111 1246888754 34688999999999999999999954
No 365
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.06 E-value=4e-10 Score=68.07 Aligned_cols=79 Identities=15% Similarity=0.265 Sum_probs=54.0
Q ss_pred CceEeeCCCeEEEecCCC--CceeEEEEeCCCeEEEecC--CCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEE
Q psy3125 85 RGARLSAGPLLNFAFPDL--LTTNIYTYTGDARFSVIHP--QNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLN 159 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~ 159 (163)
....+..|..+.+.|... +.+.+.|++++..+..... .......|.|.+++.+|+|.|+|.| |..|..+..+.|.
T Consensus 18 ~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 97 (108)
T 3kvq_A 18 ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFI 97 (108)
T ss_dssp CCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEE
T ss_pred CCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEE
Confidence 445677889999999743 4567899988764421110 0112346999999999999999999 8889999999999
Q ss_pred EecC
Q psy3125 160 VDGK 163 (163)
Q Consensus 160 V~~~ 163 (163)
|.++
T Consensus 98 V~~~ 101 (108)
T 3kvq_A 98 IEGA 101 (108)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 9863
No 366
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.06 E-value=1.3e-10 Score=71.94 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=48.6
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEecceEecCCCeEEEeccC-CCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEE
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQ-NSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMA 75 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~ 75 (163)
|.|.+.+.| +.+.|+|.+.. +. .... ....+....... .....+|.|.+++.+|+|.|+|.+. ..+.....
T Consensus 28 L~C~~~g~p~~~~~i~W~~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~ 103 (122)
T 3s35_X 28 LNCTARTELNVGIDFNWEYPSSK-HQ-HKKL--VNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNS 103 (122)
T ss_dssp EEEEEEECTTCCCEEEEECSCTT-CC-HHHH--BCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EEEEEEcCCCCcEEEEEECCCcc-cC-Ccee--eeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCCceEEE
Confidence 689999844 68899973221 10 0000 001111111000 0125679999999999999999994 45566778
Q ss_pred EEEEEEcCC
Q psy3125 76 IMLNVDDRG 84 (163)
Q Consensus 76 ~~l~V~~~~ 84 (163)
+.|.|.+++
T Consensus 104 ~~l~V~~~p 112 (122)
T 3s35_X 104 TFVRVHEKP 112 (122)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeccC
Confidence 888888764
No 367
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.06 E-value=6.4e-10 Score=70.69 Aligned_cols=74 Identities=20% Similarity=0.216 Sum_probs=54.2
Q ss_pred ceEeeCCCeEEEecCC--CCceeEEEEeCC----------------------------C-------eEEEecCCCCceEE
Q psy3125 86 GARLSAGPLLNFAFPD--LLTTNIYTYTGD----------------------------A-------RFSVIHPQNSDEWN 128 (163)
Q Consensus 86 ~~~v~~~~~~~~~~~~--~~~~~~~~~~~~----------------------------~-------~~~~~~~~~~~~~~ 128 (163)
...+..|..+.+.|.. .+.+.+.|++++ . ++.+.. ......
T Consensus 27 ~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~--~~~~s~ 104 (139)
T 1gxe_A 27 TIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVET--TKDRSI 104 (139)
T ss_dssp EEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEE--ETTEEE
T ss_pred CEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEe--CCCEEE
Confidence 4456677777777753 455677887766 1 122211 122457
Q ss_pred EEecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
|.|.+++.+|+|.|+|.| |..|..+..+.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 999999999999999999 999999999999985
No 368
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.06 E-value=5.1e-10 Score=68.30 Aligned_cols=65 Identities=20% Similarity=0.421 Sum_probs=46.5
Q ss_pred CceEEecC--C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + +.|.|+|......+. ......+||.+..+.....++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~r~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 20 IKCVLKDHSCGLSSTTWYRTQLGSTNE---KTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp EEEEEESCSSCCCEEEEEEEETTCCCC---EECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEeEECCCCCCCCEEEEEEeCCCCCce---EeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 68999876 4 899999964322110 01123578887644345689999999999999999999954
No 369
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.06 E-value=1.5e-09 Score=66.94 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=57.0
Q ss_pred ceEeeCCCeEEEecCC----CCceeEEEEeCCCeEE-----------Eec-CCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 86 GARLSAGPLLNFAFPD----LLTTNIYTYTGDARFS-----------VIH-PQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 86 ~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
...+..|..+.+.|.. .+...+.|++++.... ... ........|.|.+++.+|+|.|+|.| |.
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred CEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 4477789999999964 2335778988766221 000 00113457999999999999999999 88
Q ss_pred CCCccEEEEEEEecC
Q psy3125 149 EPKMNMAIMLNVDGK 163 (163)
Q Consensus 149 ~~~~~~~~~L~V~~~ 163 (163)
.|..+..+.|.|.++
T Consensus 97 ~g~~~~~~~l~V~~~ 111 (122)
T 3s35_X 97 LMTKKNSTFVRVHEK 111 (122)
T ss_dssp SCEEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEecc
Confidence 899999999998753
No 370
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.05 E-value=1.2e-08 Score=75.13 Aligned_cols=114 Identities=12% Similarity=0.121 Sum_probs=67.4
Q ss_pred CeEEEEEcccCcCCCeeEEEEeeC-CCCeeEEEEEEEEcCCCceEee--------CCC-eEEEecCCC---Cc--eeEEE
Q psy3125 45 DEWNMKIDYAQKRDAGIYECQVNT-EPKMNMAIMLNVDDRGRGARLS--------AGP-LLNFAFPDL---LT--TNIYT 109 (163)
Q Consensus 45 ~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~v~--------~~~-~~~~~~~~~---~~--~~~~~ 109 (163)
++.+|.|.+++.+|+|.|.|.+.+ .......+.|.|..++. +.+. .|. .+.+.|... +. ..+.|
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~-V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW 330 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPK-VSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEW 330 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCE-EEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCe-EeeccCcceeecCCCccEEEEEEecCCcCCCCcEEEE
Confidence 578999999999999999999954 33445567788887643 2222 343 567778531 22 57888
Q ss_pred E-eCC--Ce-EEE------e---cCCC---CceEEEEecccCcCCC-eeEEEEc-CCC-CCccEEEEEE
Q psy3125 110 Y-TGD--AR-FSV------I---HPQN---SDEWNMKIDYAQKRDA-GIYECQV-NTE-PKMNMAIMLN 159 (163)
Q Consensus 110 ~-~~~--~~-~~~------~---~~~~---~~~~~L~i~~v~~~D~-G~Y~C~a-~~~-~~~~~~~~L~ 159 (163)
. +++ .. ... . .... .....|.|...+.+|. +.|+|.| +.. ...++++.+.
T Consensus 331 ~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL~~g~rs~sVt 399 (401)
T 3f8u_B 331 ELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSLPASGRSAEVT 399 (401)
T ss_dssp EEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTSCTTCEEEEEE
T ss_pred EecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCCCCCcceEEEE
Confidence 4 543 11 111 1 0011 1134577777654444 5899999 443 2344444443
No 371
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.05 E-value=3.4e-10 Score=66.46 Aligned_cols=61 Identities=18% Similarity=0.393 Sum_probs=42.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-CC-eeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-PK-MNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~~-~~~~~~ 77 (163)
|.|.+.+.| +.+.|+| ++..+. .....+|.|.+++.+|+|.|+|.+.+. +. .+..+.
T Consensus 23 l~C~~~g~p~p~i~W~~--~~~~~~------------------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~ 82 (91)
T 3bfo_A 23 LQCVAVGSPIPHYQWFK--NELPLT------------------HETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVE 82 (91)
T ss_dssp EECEEECSSCCEEEEEE--TTEECT------------------TCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEE
T ss_pred EEEEeccCCCCEEEEEc--CCeeCC------------------cCCCCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEE
Confidence 679999999 9999998 322211 112346999999999999999999543 32 234455
Q ss_pred EEEE
Q psy3125 78 LNVD 81 (163)
Q Consensus 78 l~V~ 81 (163)
|.|.
T Consensus 83 l~V~ 86 (91)
T 3bfo_A 83 IIID 86 (91)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6554
No 372
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=7.9e-10 Score=68.00 Aligned_cols=77 Identities=22% Similarity=0.182 Sum_probs=58.7
Q ss_pred CceEeeCCCeEEEecCC--CCceeEEEEeCCCeEE-----EecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEE
Q psy3125 85 RGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFS-----VIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAI 156 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~ 156 (163)
....+..|..+.+.|.. .+.+.+.|++++..+. +. .......|.|.+++.+|+|.|+|.| |..|..+..+
T Consensus 32 ~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~--~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~ 109 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVR--TSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATI 109 (118)
T ss_dssp SCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEE--ECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEE
T ss_pred CCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEE--ECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEE
Confidence 44567778888888863 3456788988765332 21 1233566999999999999999999 9999999999
Q ss_pred EEEEecC
Q psy3125 157 MLNVDGK 163 (163)
Q Consensus 157 ~L~V~~~ 163 (163)
.|.|..+
T Consensus 110 ~l~V~~~ 116 (118)
T 2e7c_A 110 RIRVVEK 116 (118)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999764
No 373
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.05 E-value=1.4e-09 Score=65.97 Aligned_cols=64 Identities=20% Similarity=0.411 Sum_probs=42.2
Q ss_pred CceEEecCC-C-----cEEEEEecCCeeEEe-cceEe------cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG-R-----PVSWMRKRDLHILTT-NIYTY------TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~-~-----~v~W~k~~~~~~~~~-~~~~~------~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.| + .|.|+|.+...++.. .+... ...+|+.+.. ++++|.|.+++.+|+|.|.|.+.
T Consensus 14 L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~sL~I~~v~~~D~G~Y~C~v~ 89 (110)
T 1ncn_A 14 LPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDS----DSWTLRLHNLQIKDKGLYQCIIH 89 (110)
T ss_dssp EECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEET----TTTEEEECSCCGGGCEEEEEEEE
T ss_pred EEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEEC----CCEEEEEcCCChHHCEEEEEEEE
Confidence 689988655 2 499998544323221 11111 1135666653 25789999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
+
T Consensus 90 ~ 90 (110)
T 1ncn_A 90 H 90 (110)
T ss_dssp E
T ss_pred c
Confidence 4
No 374
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.04 E-value=1.8e-09 Score=66.33 Aligned_cols=79 Identities=15% Similarity=0.251 Sum_probs=59.2
Q ss_pred CCceEeeCCCeEEEecCC--CCceeEEEEeCCCe-------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 84 GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR-------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
+....+..|..+.+.|.. .+.+.+.|++++.. +.+.. .......|.|.+++.+|+|.|+|.| |..|..+
T Consensus 22 p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 100 (116)
T 2kkq_A 22 PQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQ-DNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTT 100 (116)
T ss_dssp CCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEE-CTTCEEEEEEEEECGGGCEEEEEEEEETTEEEE
T ss_pred CCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEe-CCCCeEEEEECCCCcccCEEEEEEEEcCCCeEE
Confidence 445677888889999953 34567889887643 33222 1123457999999999999999999 8889999
Q ss_pred EEEEEEEecC
Q psy3125 154 MAIMLNVDGK 163 (163)
Q Consensus 154 ~~~~L~V~~~ 163 (163)
..+.|.|..+
T Consensus 101 ~~~~l~V~~~ 110 (116)
T 2kkq_A 101 CNTRLDVTAR 110 (116)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEeCC
Confidence 9999999753
No 375
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.04 E-value=6.7e-10 Score=73.54 Aligned_cols=69 Identities=22% Similarity=0.300 Sum_probs=50.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+| ++.. +....++.+... ....+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 123 l~C~~~g~p~~~v~W~~--~~~~-------~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 191 (194)
T 2a38_A 123 LQVRVTGIPTPVVKFYR--DGAE-------IQSSLDFQISQE--GDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191 (194)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCCSSSEEEEEE--TTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEecCCeEEEEE--CCEE-------CCCCCcEEEEEc--CCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEE
Confidence 579999999 9999998 3222 233556666542 34668999999999999999999 445556666666
Q ss_pred EE
Q psy3125 79 NV 80 (163)
Q Consensus 79 ~V 80 (163)
.|
T Consensus 192 ~V 193 (194)
T 2a38_A 192 LV 193 (194)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 376
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.04 E-value=8.2e-10 Score=69.64 Aligned_cols=77 Identities=21% Similarity=0.319 Sum_probs=51.4
Q ss_pred CceEEecCCCcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-----CeeEE
Q psy3125 1 MACTVMGLGRPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-----KMNMA 75 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-----~~~~~ 75 (163)
|.|.+.+. +.|.|+|+..+..+. ......+||.+.. +...++|.|.+++.+|+|.|.|.+.+.. .....
T Consensus 37 L~C~~~~~-~~v~W~r~~~g~~~~---~l~~~~~r~~~~~--~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~~~g~g 110 (133)
T 3khq_A 37 FHCYTNHS-GALTWFRKRGSQQPQ---ELVSEEGRIVQTQ--NGSVYTLTIQNIQYEDNGIYFCKQKCDSANHNVTDSCG 110 (133)
T ss_dssp EEEEESSS-SCEEEEEECTTSCCE---ECCCTTTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEESSCC-------CCC
T ss_pred EEEEeCCC-CEEEEEEeCCCCCCE---EEEEeCCCEEEEc--CCCEEEEEECCCChHHCEEEEEEEEeCCCCcceeECCC
Confidence 57999988 899999964321110 0011467888875 2457899999999999999999995432 13445
Q ss_pred EEEEEEcC
Q psy3125 76 IMLNVDDR 83 (163)
Q Consensus 76 ~~l~V~~~ 83 (163)
+.|.|...
T Consensus 111 t~L~V~~~ 118 (133)
T 3khq_A 111 TELLVLGF 118 (133)
T ss_dssp EEEEEC--
T ss_pred EEEEEEec
Confidence 66777654
No 377
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.04 E-value=4.1e-09 Score=61.05 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=53.2
Q ss_pred ceEeeCCCeEEEecCC-CCceeEEEEeCCCeE------EEecCCCCceEEEEecccCcCCCeeEEEEcCCCCCccEEEEE
Q psy3125 86 GARLSAGPLLNFAFPD-LLTTNIYTYTGDARF------SVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 158 (163)
Q Consensus 86 ~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~~~~~~L 158 (163)
.+.+..|..+.+.|.. .+.+.+.|++++..+ .+.. ......|.|.+++.+|+|.|+|.| ++.+..+.|
T Consensus 5 ~v~~~~G~~v~l~C~vs~p~p~v~W~k~g~~l~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a---~n~~~~a~l 79 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQ--AGARQVLRVQGARSGDAGEYLCDA---PQDSRIFLV 79 (84)
T ss_dssp CEEECTTSCEEEECCCSCCSTTCEEEETTEECCCCSSEEEEE--CSSCEEEEESSCSSTTCEEEEEEC---TTTCEEEEE
T ss_pred EEEEecCCCEEEEEEECCCCcEEEEEECCEEccccccEEEee--cCCeEEEEecCCCCcccEEEEEEE---CCEEEEEEE
Confidence 4567788999999963 345678999876533 3322 234567999999999999999998 335678888
Q ss_pred EEec
Q psy3125 159 NVDG 162 (163)
Q Consensus 159 ~V~~ 162 (163)
.|+.
T Consensus 80 ~V~e 83 (84)
T 2lu7_A 80 SVEE 83 (84)
T ss_dssp EECC
T ss_pred EEEC
Confidence 8864
No 378
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.03 E-value=2.6e-09 Score=63.09 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=55.3
Q ss_pred EEcCCCceEeeCCCeEEEecCC-CCceeEEEEeCCCe------EEEecCCCCceEEEEecccCcCCCeeEEEEcCCCCCc
Q psy3125 80 VDDRGRGARLSAGPLLNFAFPD-LLTTNIYTYTGDAR------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKM 152 (163)
Q Consensus 80 V~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~ 152 (163)
+..++....+..|..+.+.|.. ...+.+.|++++.. +.+.. ......|.|.+++.+|+|.|+|.|.+ .
T Consensus 8 ~~~~~~~~~v~~G~~v~l~C~v~~~~~~v~W~k~g~~i~~~~~~~i~~--~g~~~~L~I~~v~~~D~G~Y~C~a~n---~ 82 (93)
T 1waa_A 8 VEKPLYGVEVFVGETAHFEIELSEPDVHGQWKLKGQPLAASPDCEIIE--DGKKHILILHNCQLGMTGEVSFQAAN---T 82 (93)
T ss_dssp EEECCCCEEEETTSCEEEEEEESSSSCCCEEEETTEECCCBTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEETT---E
T ss_pred eeccCcceEEeCCCCEEEEEEECCCCCeEEEEECCEECcCCCCEEEEE--ECCEEEEEECCCChhhCEEEEEEECC---C
Confidence 3445556778889999999963 23457889987643 33322 12356799999999999999999922 3
Q ss_pred cEEEEEEEec
Q psy3125 153 NMAIMLNVDG 162 (163)
Q Consensus 153 ~~~~~L~V~~ 162 (163)
..++.|.|++
T Consensus 83 ~~sa~L~V~~ 92 (93)
T 1waa_A 83 KSAANLKVKE 92 (93)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEEEc
Confidence 4678888875
No 379
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=99.03 E-value=1.6e-09 Score=67.22 Aligned_cols=64 Identities=19% Similarity=0.360 Sum_probs=46.3
Q ss_pred CceEEecC--C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. + ..|.|+|......+. ..+...+||.+..+.....++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~---~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 86 (121)
T 2i24_N 20 INCVVRDSRCVLSTGYWYRKPPGSRNE---ESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPE 86 (121)
T ss_dssp EEEEECSCCCCEEEEEEEEECTTCSCC---EEECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEeEccCCCCCCCEEEEEEeCCCCCce---eeEecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEEEe
Confidence 68999876 3 689999965322111 1122457888765445578999999999999999999995
No 380
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.02 E-value=1.4e-09 Score=65.54 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=58.9
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEec----CCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEE
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIH----PQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMA 155 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~ 155 (163)
.+....+..|..+.+.|.. .+.+.+.|++++..+.... ........|.|.+++.+|+|.|+|.| |..|..+..
T Consensus 19 ~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 98 (107)
T 3irg_B 19 FPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAA 98 (107)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEE
Confidence 3445677888889999963 3445788988764332111 01123457999999999999999999 888999999
Q ss_pred EEEEEec
Q psy3125 156 IMLNVDG 162 (163)
Q Consensus 156 ~~L~V~~ 162 (163)
+.|.|.+
T Consensus 99 ~~l~V~~ 105 (107)
T 3irg_B 99 AAVTVLE 105 (107)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9999976
No 381
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.02 E-value=4.8e-10 Score=66.34 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=53.9
Q ss_pred ceEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEe
Q psy3125 86 GARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVD 161 (163)
Q Consensus 86 ~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~ 161 (163)
...+..|..+.+.|... ..+.+.|++++..+............|.|.+++.+|+|.|+|.| |..|..+..+.|.|.
T Consensus 18 ~~~v~~G~~v~l~C~~~g~pp~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 95 (95)
T 2ckn_A 18 SLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNVS 95 (95)
T ss_dssp CEEECTTSCEEEECCEESSCCEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eEEEcCCCeEEEEEECCCCCCceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEEEC
Confidence 45667788899998632 12578898876533211110011346999999999999999999 888998888888873
No 382
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=1.7e-09 Score=65.54 Aligned_cols=77 Identities=13% Similarity=0.210 Sum_probs=57.8
Q ss_pred CceEeeCCCeEEEecCC--CCceeEEEEeCCCe-------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccE
Q psy3125 85 RGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR-------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNM 154 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~ 154 (163)
....+..|..+.+.|.. .+.+.+.|++++.. +.+... ......|.|.+++.+|+|.|+|.| |..|..+.
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 94 (110)
T 2dm2_A 16 KHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRD-LDGTCSLHTTASTLDDDGNYTIMAANPQGRISC 94 (110)
T ss_dssp CCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEEC-TTCEEEEEESSCCTTTCSCCEEEEECTTCCEEE
T ss_pred cCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEEC-CCcEEEEEECCCChhhCEEEEEEEEECCCeEEE
Confidence 34567778888898863 34567889887543 333321 123457999999999999999999 88899999
Q ss_pred EEEEEEec
Q psy3125 155 AIMLNVDG 162 (163)
Q Consensus 155 ~~~L~V~~ 162 (163)
.+.|.|..
T Consensus 95 ~~~l~V~~ 102 (110)
T 2dm2_A 95 TGRLMVQA 102 (110)
T ss_dssp CCCEEEEC
T ss_pred EEEEEEEC
Confidence 99998875
No 383
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.02 E-value=1.3e-09 Score=66.49 Aligned_cols=66 Identities=17% Similarity=0.276 Sum_probs=47.2
Q ss_pred CceEEecCC-CcEEEEEecCC---e-eEEecceEe-cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---H-ILTTNIYTY-TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~-~~~~~~~~~-~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ +.|.|+|.... . ++....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+
T Consensus 24 L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 95 (111)
T 1i3g_L 24 ITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG--SGTDFTLTISNVQSEDLADYFCQQYS 95 (111)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCSEEEEEECS
T ss_pred EEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc--CCCEEEEEECCCCHHHCEEEEEEEec
Confidence 689999887 89999996532 2 222221111 1246888764 34678999999999999999999954
No 384
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=99.02 E-value=7e-10 Score=67.74 Aligned_cols=67 Identities=13% Similarity=0.323 Sum_probs=47.8
Q ss_pred CceEEecCC-CcEEEEEecCC---eeE-Eecc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HIL-TTNI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~-~~~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ ..|.|+|.... ..+ .... ......+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 92 (112)
T 2z35_A 20 IHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESDSAVYYCALS 92 (112)
T ss_dssp ECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCSEEEEEEE
T ss_pred EEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 689998877 88999996532 222 2111 0111257898875445668899999999999999999996
No 385
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.02 E-value=1.1e-09 Score=72.35 Aligned_cols=76 Identities=20% Similarity=0.353 Sum_probs=54.2
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+|.+.+..+..+. ...++++.+... ....+|.|.+++.+|+|.|+|.+. ..+.....+.|
T Consensus 114 l~C~~~~~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 189 (192)
T 2va4_A 114 LVCDAEGEPIPEITWKRAVDGFTFTEGD--KSLDGRIEVKGQ--HGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYL 189 (192)
T ss_dssp EEEEEEEESCCEEEEEETTTTEEECTTC--BCTTSCEEEEEE--TTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEecCCCCCcEEEEeCCCCceeeccc--cccCCcEEEeec--cCceEEEEecCCcccCEEEEEEEEecCCceEEEEEE
Confidence 579999999 999999854344432211 123567766642 346789999999999999999994 45556666666
Q ss_pred EE
Q psy3125 79 NV 80 (163)
Q Consensus 79 ~V 80 (163)
.|
T Consensus 190 ~V 191 (192)
T 2va4_A 190 DI 191 (192)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 386
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.02 E-value=4.9e-10 Score=66.59 Aligned_cols=77 Identities=17% Similarity=0.057 Sum_probs=55.6
Q ss_pred CceEeeCCCeEEEecCC---CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEE
Q psy3125 85 RGARLSAGPLLNFAFPD---LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNV 160 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V 160 (163)
....+..|..+.+.|.. .+...+.|++++...... ........|.|.+++.+|+|.|+|.| |..|..+..+.|.|
T Consensus 18 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 18 RSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS-RAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp CEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCT-TEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCc-eeecCCCEEEEeCCChhhCEEEEEEecCCCCccccEEEEEE
Confidence 44577888999999963 345678898764321100 00011236999999999999999999 88899999999999
Q ss_pred ec
Q psy3125 161 DG 162 (163)
Q Consensus 161 ~~ 162 (163)
++
T Consensus 97 ~~ 98 (98)
T 1gl4_B 97 QV 98 (98)
T ss_dssp C-
T ss_pred eC
Confidence 75
No 387
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=6.9e-10 Score=67.26 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=58.7
Q ss_pred CCCceEeeCCCeEEEecC--CCCceeEEEEeCCCeEE------EecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 83 RGRGARLSAGPLLNFAFP--DLLTTNIYTYTGDARFS------VIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.+....+..|..+.+.|. ..+.+.+.|++++..+. ... .......|.|.+++.+|+|.|+|.| |..+..+
T Consensus 15 ~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 93 (110)
T 2dm3_A 15 APGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLV-RENGVHSLIIEPVTSRDAGIYTCIATNRAGQNS 93 (110)
T ss_dssp CCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEE-CTTSCEEEEESSCCGGGCSBBCEEEECSSCEEE
T ss_pred CCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEE-ecCCeEEEEEeeCCcccCEEEEEEEECCCCEEE
Confidence 344566777888888886 34456788887765332 111 1123567999999999999999999 8889999
Q ss_pred EEEEEEEecC
Q psy3125 154 MAIMLNVDGK 163 (163)
Q Consensus 154 ~~~~L~V~~~ 163 (163)
..+.|.|.++
T Consensus 94 ~~~~l~V~~~ 103 (110)
T 2dm3_A 94 FSLELVVAAK 103 (110)
T ss_dssp ECCEEEEECC
T ss_pred EEEEEEEeCC
Confidence 9999999764
No 388
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.01 E-value=7.5e-10 Score=64.93 Aligned_cols=79 Identities=15% Similarity=0.246 Sum_probs=57.9
Q ss_pred EEEEcCCCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCc-c
Q psy3125 78 LNVDDRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKM-N 153 (163)
Q Consensus 78 l~V~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~-~ 153 (163)
+.|...+....+..|..+.+.|.. .+.+.+.|++++..+. . .....|.|.+++.+|+|.|+|.| |..+.. +
T Consensus 4 ~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~--~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s 78 (91)
T 3bfo_A 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLT--H---ETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDS 78 (91)
T ss_dssp CEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECT--T---CCSSEEEESSCCGGGCEEEEEEEECSSCEEEC
T ss_pred eEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCC--c---CCCCeEEECCCCHHhCEEEEEEEEcCCCCEEe
Confidence 345556666778889999999963 4556888998765322 1 12346999999999999999999 777753 3
Q ss_pred EEEEEEEe
Q psy3125 154 MAIMLNVD 161 (163)
Q Consensus 154 ~~~~L~V~ 161 (163)
..+.|.|.
T Consensus 79 ~~~~l~V~ 86 (91)
T 3bfo_A 79 KKVEIIID 86 (91)
T ss_dssp CCEEEEEC
T ss_pred eeEEEEEe
Confidence 56777775
No 389
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.00 E-value=1.4e-09 Score=72.01 Aligned_cols=71 Identities=11% Similarity=0.310 Sum_probs=52.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCc-CCCeeEEEEee-CCCCeeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQK-RDAGIYECQVN-TEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~~~-~~~~~~~~~~ 77 (163)
|.|.+.+.| +.+.|+| +... +....++.+.. .....+|.|.++.. +|+|.|+|.+. ..+.....+.
T Consensus 123 l~C~~~~~p~p~v~W~~--~~~~-------~~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 191 (197)
T 3lcy_A 123 LHVMYIGRPVPAMTWFH--GQKL-------LQNSENITIEN--TEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILD 191 (197)
T ss_dssp EEEEEEEESCCEEEEEE--TTEE-------CCCCSSEEEEE--CSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEeeeeCCeeEEeE--CCEE-------CCCCCceEEEE--cCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEE
Confidence 579999999 9999998 3322 23455666654 23457899999995 89999999994 4566677777
Q ss_pred EEEEc
Q psy3125 78 LNVDD 82 (163)
Q Consensus 78 l~V~~ 82 (163)
|.|.+
T Consensus 192 l~V~~ 196 (197)
T 3lcy_A 192 VEIQD 196 (197)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87764
No 390
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.00 E-value=1.1e-09 Score=68.39 Aligned_cols=64 Identities=17% Similarity=0.358 Sum_probs=46.8
Q ss_pred CceEEecC--C-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+++. + ..+.|+|+..+..+ .......+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~---~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 86 (126)
T 3moq_A 20 INCVLRDASFELKDTGWYRTKLGSTN---EQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQAF 86 (126)
T ss_dssp EEEEEESCSSCCCEEEEEEEETTCCC---CEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeecCccCCceEEEEEeCCCCCc---eEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEEEE
Confidence 68999876 4 78999996432211 01122457888876545678999999999999999999994
No 391
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.00 E-value=1.6e-09 Score=66.81 Aligned_cols=82 Identities=13% Similarity=0.274 Sum_probs=53.5
Q ss_pred CceEEecC----CCcEEEEEecCC---e-eEEecc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-C
Q psy3125 1 MACTVMGL----GRPVSWMRKRDL---H-ILTTNI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-P 70 (163)
Q Consensus 1 l~C~~~~~----~~~v~W~k~~~~---~-~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~ 70 (163)
|+|.+... ...+.|+|.... . ++.... ......+|+.+..+...+.++|.|.+++.+|+|.|.|.+... .
T Consensus 20 L~C~~s~~~~~~~~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~DsG~Y~C~v~~~~~ 99 (117)
T 1xed_A 20 ITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSR 99 (117)
T ss_dssp EEEECCCCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCGGG
T ss_pred EEeEecCCcCCCCceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 57888765 267999996432 2 222221 112235788887655567899999999999999999999542 2
Q ss_pred CeeEEEEEEEEc
Q psy3125 71 KMNMAIMLNVDD 82 (163)
Q Consensus 71 ~~~~~~~l~V~~ 82 (163)
.......|.|.+
T Consensus 100 ~l~f~~~~~~~~ 111 (117)
T 1xed_A 100 GLSFDVSLEVLE 111 (117)
T ss_dssp CCEEEEEEEEEC
T ss_pred CeeEEEEEEEee
Confidence 344555566654
No 392
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=71.78 Aligned_cols=69 Identities=17% Similarity=0.392 Sum_probs=50.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+| ++..+ ....++.+.. .+.+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 118 l~C~~~g~p~~~v~W~~--~g~~~-------~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 184 (189)
T 2v5t_A 118 FSCRASGSPEPAISWFR--NGKLI-------EENEKYILKG----SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 184 (189)
T ss_dssp EECEEEEESCCEEEEEE--TTEEC-------CCSSSEEEET----TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEccCCCCeEEEEE--CCEEC-------cCCCcEEEec----CCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEE
Confidence 579999999 9999998 33222 2345565543 2457999999999999999999 445566667777
Q ss_pred EEEc
Q psy3125 79 NVDD 82 (163)
Q Consensus 79 ~V~~ 82 (163)
.|..
T Consensus 185 ~V~v 188 (189)
T 2v5t_A 185 QVFV 188 (189)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7653
No 393
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=99.00 E-value=3.5e-09 Score=65.61 Aligned_cols=67 Identities=16% Similarity=0.418 Sum_probs=47.1
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEecc---e-Ee--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTNI---Y-TY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~~---~-~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.+ ..|.|+|...+ . ++.... . .. ...+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 22 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 101 (121)
T 2xt1_B 22 LSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDLKPEDTAMYYCKAS 101 (121)
T ss_dssp EEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEET
T ss_pred EEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 689998643 68999996432 2 222111 1 11 1247999886544578999999999999999999985
No 394
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=98.99 E-value=6.3e-10 Score=68.41 Aligned_cols=68 Identities=13% Similarity=0.260 Sum_probs=47.7
Q ss_pred CceEEecC-C-CcEEEEEecCCe----eEEec--ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDLH----ILTTN--IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~~----~~~~~--~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + ..|.|+|..... ++... .......+||.+..+...+.++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 20 MDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIEDSAVYFCAMRG 95 (116)
T ss_dssp ECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEc
Confidence 68999887 5 789999965321 22211 111112578988643345688999999999999999999954
No 395
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=9.1e-10 Score=69.51 Aligned_cols=84 Identities=18% Similarity=0.364 Sum_probs=52.4
Q ss_pred CceEEecC-C-CcEEEEEecCC--eeEEecceEecCCCeEEEecc---CCCCeEEEEEcccCcCCCeeEEEEeeCCCC--
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL--HILTTNIYTYTGDARFSVIHP---QNSDEWNMKIDYAQKRDAGIYECQVNTEPK-- 71 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~--~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-- 71 (163)
|.|.+.+. + +.|.|+|.... .++...... ..+|+....+ ......+|.|.+++.+|+|.|.|.+.+...
T Consensus 28 L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~--~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~ 105 (136)
T 2d9c_A 28 LRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG--HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPD 105 (136)
T ss_dssp ECCEESCCCSCCCCEEEETTTSSCEEEEESSSC--CCSSBCCSSCSSSSSCCBCCEEESSCCTTTCEEEEEEEEECCSSS
T ss_pred EEEEEcCCCCCceEEEEeecCCCeEEEEEcCCC--cccceeeeeeeccCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCc
Confidence 68999876 4 88999995422 122211110 1146554321 112478899999999999999999954221
Q ss_pred -ee----EEEEEEEEcCCCc
Q psy3125 72 -MN----MAIMLNVDDRGRG 86 (163)
Q Consensus 72 -~~----~~~~l~V~~~~~~ 86 (163)
.. ..+.|.|..++..
T Consensus 106 ~~~~~~g~~t~L~V~~~~s~ 125 (136)
T 2d9c_A 106 DVEFKSGAGTELSVRAKPSA 125 (136)
T ss_dssp CEEEEECCCEEEEEECCCCC
T ss_pred ccceeeCCCeEEEEEeCCCC
Confidence 11 4567888876543
No 396
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=2.2e-10 Score=67.96 Aligned_cols=61 Identities=18% Similarity=0.307 Sum_probs=42.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC--eeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK--MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~--~~~~~ 76 (163)
|.|.+.+.| +.|.|+| +...+. ...+.+|.|.+++.+|+|.|+|.+.+ ... .+..+
T Consensus 30 l~C~~~g~p~~~v~W~k--~~~~~~------------------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~ 89 (96)
T 2ens_A 30 LTCEVPAQPSPQIHWMK--DGVPLP------------------LPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAV 89 (96)
T ss_dssp EECCCSSCSSCCCCCEE--SSSBCS------------------SCCCSEEEEESCCTTTCEEEECEECCSSCCCEECCCE
T ss_pred EEEEEccCCCCEEEEEE--CCEECc------------------CCCCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEE
Confidence 579999999 9999998 222111 01245799999999999999999955 333 34455
Q ss_pred EEEEE
Q psy3125 77 MLNVD 81 (163)
Q Consensus 77 ~l~V~ 81 (163)
.|.|.
T Consensus 90 ~v~V~ 94 (96)
T 2ens_A 90 SISII 94 (96)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55554
No 397
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=3.8e-10 Score=67.36 Aligned_cols=76 Identities=13% Similarity=0.160 Sum_probs=54.2
Q ss_pred eEeeCCCeEEEecCCC-CceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 87 ARLSAGPLLNFAFPDL-LTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 87 ~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
..+..|..+.+.|... ..+.+.|++++..+............|.|.+++.+|+|.|+|.| |..+..+..+.|.|.+
T Consensus 13 ~~v~~G~~v~L~C~~~g~pp~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 90 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRDDVQSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSD 90 (99)
T ss_dssp CCBCTTSCEEEECCCCSSCCEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCS
T ss_pred eEEeCCCcEEEEEEecCCCCeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEec
Confidence 3466788899999643 23578898876533211100001236999999999999999999 8888888888888865
No 398
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.97 E-value=1.2e-09 Score=65.64 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=51.1
Q ss_pred CCeEEEecC--CCCceeEEEEeCCCeEEEec---------CCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEE
Q psy3125 92 GPLLNFAFP--DLLTTNIYTYTGDARFSVIH---------PQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLN 159 (163)
Q Consensus 92 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~ 159 (163)
+..+.+.|. ..+.+.+.|++++..+.... ........|.|.+++.+|+|.|+|.| |..|..+.++.|.
T Consensus 16 ~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~ 95 (103)
T 1wwb_X 16 DHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAH 95 (103)
T ss_dssp CCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred CcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEE
Confidence 344555553 45667888888765332111 01122455999999999999999999 9999999999999
Q ss_pred EecC
Q psy3125 160 VDGK 163 (163)
Q Consensus 160 V~~~ 163 (163)
|.++
T Consensus 96 V~~~ 99 (103)
T 1wwb_X 96 FMGW 99 (103)
T ss_dssp CSCC
T ss_pred ECCC
Confidence 8753
No 399
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.97 E-value=2.1e-09 Score=66.71 Aligned_cols=75 Identities=12% Similarity=0.223 Sum_probs=54.3
Q ss_pred ceEeeCCCeEEEecCCC--CceeEEEEeCCCeEE--------------EecCCCCceEEEEecccCcCCCeeEEEEc-CC
Q psy3125 86 GARLSAGPLLNFAFPDL--LTTNIYTYTGDARFS--------------VIHPQNSDEWNMKIDYAQKRDAGIYECQV-NT 148 (163)
Q Consensus 86 ~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------------~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~ 148 (163)
...+..|..+.+.|... +...+.|+..+.... +.. .......|.|.+++.+|+|.|+|.| |.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 88 (124)
T 3rbg_A 10 TITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLH-HSANQLSITVPNVTLQDEGVYKCLHYSD 88 (124)
T ss_dssp EEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEE-EETTEEEEEESSCCGGGCEEEEEEEESS
T ss_pred cEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEe-CCCCEEEEEECCCChHHCEEEEEEEEcC
Confidence 34566788888888642 446778886554332 111 1123568999999999999999999 77
Q ss_pred CCCccEEEEEEEec
Q psy3125 149 EPKMNMAIMLNVDG 162 (163)
Q Consensus 149 ~~~~~~~~~L~V~~ 162 (163)
+..+..+.|.|.+
T Consensus 89 -g~~~~~~~l~V~~ 101 (124)
T 3rbg_A 89 -SVSTKEVKVIVLA 101 (124)
T ss_dssp -SEEEEEEEEEEEC
T ss_pred -CCCcEEEEEEEEe
Confidence 8889999999875
No 400
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.96 E-value=2e-09 Score=65.63 Aligned_cols=66 Identities=23% Similarity=0.399 Sum_probs=46.7
Q ss_pred CceEEe-cCC-CcEEEEEecCC---e-eEEe---cce-Eec--C-CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDL---H-ILTT---NIY-TYT--G-DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~---~-~~~~---~~~-~~~--~-~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+. +.+ ..|.|+|.... . ++.. +.. .+. . .+||.+.. ..+.++|.|.+++.+|+|.|.|.+.
T Consensus 19 L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~~~~~DsG~Y~C~~~ 96 (111)
T 2qhl_A 19 MECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV--NDQKFDLNIIGTREDDGGEYFCGEV 96 (111)
T ss_dssp ECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE--SSSBEEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEE--cCCeEEEEECCCChhHCEEEEEEEc
Confidence 579998 777 88999996432 2 2211 111 111 1 57898875 3468899999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 97 ~ 97 (111)
T 2qhl_A 97 E 97 (111)
T ss_dssp E
T ss_pred c
Confidence 4
No 401
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=98.96 E-value=7e-09 Score=64.32 Aligned_cols=68 Identities=15% Similarity=0.393 Sum_probs=47.3
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEecc----eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTNI----YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~~----~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..|.|+|.... . ++.... .... ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 22 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 101 (123)
T 2p45_B 22 LSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMDSLKPEDTATYYCAAG 101 (123)
T ss_dssp EEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEESSCCGGGCEEEEEEES
T ss_pred EEEEecCccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 689998643 78999996532 1 222111 1111 246999886544568999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 102 ~ 102 (123)
T 2p45_B 102 G 102 (123)
T ss_dssp S
T ss_pred e
Confidence 4
No 402
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=98.96 E-value=1.6e-09 Score=66.34 Aligned_cols=68 Identities=19% Similarity=0.376 Sum_probs=47.6
Q ss_pred CceEEecC-C-CcEEEEEecCC-------eeEEec--c-eEe---cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEE
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL-------HILTTN--I-YTY---TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 65 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~-------~~~~~~--~-~~~---~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 65 (163)
|.|.+.+. + ..|.|+|...+ .++... . ..+ ...+||.+..+...++++|.|.+++.+|+|.|.|.
T Consensus 18 L~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 97 (115)
T 2atp_B 18 MSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSIMNVKPEDSDFYFCA 97 (115)
T ss_dssp EEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEECSCCGGGCEEEEEE
T ss_pred EEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEe
Confidence 68999876 4 78999986532 122211 1 111 12579998865445678999999999999999999
Q ss_pred eeC
Q psy3125 66 VNT 68 (163)
Q Consensus 66 ~~~ 68 (163)
+..
T Consensus 98 ~~~ 100 (115)
T 2atp_B 98 TVG 100 (115)
T ss_dssp EEC
T ss_pred Ecc
Confidence 954
No 403
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.96 E-value=5.7e-09 Score=65.95 Aligned_cols=86 Identities=16% Similarity=0.198 Sum_probs=57.9
Q ss_pred EEEEEcCCCceEeeCCCeEEEecCCC-----CceeEEEEeCCC-----------------------eEEEecC-CCCceE
Q psy3125 77 MLNVDDRGRGARLSAGPLLNFAFPDL-----LTTNIYTYTGDA-----------------------RFSVIHP-QNSDEW 127 (163)
Q Consensus 77 ~l~V~~~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~-----------------------~~~~~~~-~~~~~~ 127 (163)
.+.|..++..+.+..|..+.+.|... ....+.|++.+. |+.+... ......
T Consensus 6 ~~~V~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 85 (139)
T 1pko_A 6 QFRVIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKV 85 (139)
T ss_dssp CCEEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEE
T ss_pred EEEEECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeE
Confidence 35566666667788888899998522 124678877653 1111110 011256
Q ss_pred EEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 128 NMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 128 ~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
+|.|.+++.+|+|.|+|.+ +..+..+..+.|.|..
T Consensus 86 sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 121 (139)
T 1pko_A 86 ALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 121 (139)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEccCCHHHCEEEEEEEEcCCCceEEEEEEEEec
Confidence 8999999999999999999 6666777788888863
No 404
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.95 E-value=2.4e-10 Score=70.89 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=53.5
Q ss_pred CceEEe-cCC-CcEEEEEecCCeeEEecc--eEec---CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--C
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDLHILTTNI--YTYT---GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--K 71 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~~~~~~~~--~~~~---~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~ 71 (163)
|+|... ... ..|.|+|.+...+..... .... ..+|+.+.. .+.+|.|.+++.+|+|.|.|++.+.. .
T Consensus 24 L~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~----~~~sL~I~nv~~~DsG~Y~c~v~~~~~~~ 99 (121)
T 2edo_A 24 LNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDP----QSGALYISKVQKEDNSTYIMRVLKKTGNE 99 (121)
T ss_dssp ECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECT----TTCCEEESSCCGGGCSEEEEEEEETTTEE
T ss_pred EeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeC----CCceEEEeCCCHHHCeEEEEEEEcCCCcE
Confidence 567663 334 789999865423322211 1111 124655542 35689999999999999999995432 3
Q ss_pred eeEEEEEEEEcCCCceEe
Q psy3125 72 MNMAIMLNVDDRGRGARL 89 (163)
Q Consensus 72 ~~~~~~l~V~~~~~~~~v 89 (163)
....+.|.|.++.+.+.+
T Consensus 100 ~~~~~~L~V~~~~~~P~I 117 (121)
T 2edo_A 100 QEWKIKLQVLDPVPKPVI 117 (121)
T ss_dssp EECCEECEEECCSCCCCC
T ss_pred EEEEEEEEEECCCCCCEE
Confidence 456778899887655544
No 405
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.95 E-value=2.5e-09 Score=65.62 Aligned_cols=68 Identities=21% Similarity=0.366 Sum_probs=47.6
Q ss_pred CceEEecC-C-CcEEEEEecCC---e-eEEe-cceEe---cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL---H-ILTT-NIYTY---TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~---~-~~~~-~~~~~---~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+... + ..|.|+|.... . ++.. +.... ...+||.+..+...+.++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 97 (116)
T 1tvd_A 20 LLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVRTEDSATYYCAFTL 97 (116)
T ss_dssp ECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred EEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCChHHCEEEEEEEeC
Confidence 68999865 4 78999986432 1 2221 11111 12579988754345688999999999999999999954
No 406
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.95 E-value=1.8e-09 Score=65.94 Aligned_cols=46 Identities=17% Similarity=0.148 Sum_probs=35.7
Q ss_pred CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-C-CeeEEEEEEEEcC
Q psy3125 33 DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE-P-KMNMAIMLNVDDR 83 (163)
Q Consensus 33 ~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~-~-~~~~~~~l~V~~~ 83 (163)
.+|..+.. +++|.|++++.+|+|.|+|++.+. . .....+.|+|..+
T Consensus 63 ~gR~~~~~-----ngSL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 63 SGREIIYP-----NASLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRVYPE 110 (111)
T ss_dssp CSCEEECT-----TSCEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEEECC
T ss_pred CCcEEEec-----CCcEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEEecC
Confidence 46877764 558999999999999999999542 3 3567778888753
No 407
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.95 E-value=1.7e-09 Score=67.44 Aligned_cols=80 Identities=16% Similarity=0.304 Sum_probs=50.3
Q ss_pred CceEEecCC-C----cEEEEEecC----CeeEEe--c-ceEecC----CCeEEEeccCC---------CCeEEEEEcccC
Q psy3125 1 MACTVMGLG-R----PVSWMRKRD----LHILTT--N-IYTYTG----DARFSVIHPQN---------SDEWNMKIDYAQ 55 (163)
Q Consensus 1 l~C~~~~~~-~----~v~W~k~~~----~~~~~~--~-~~~~~~----~~r~~~~~~~~---------~~~~~L~i~~v~ 55 (163)
|+|.+...+ + .|.|+|.+. ..+..+ . +..... .+|+.+..... .++++|.|.+++
T Consensus 22 L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~~~~~sL~I~~v~ 101 (128)
T 3r0n_A 22 LPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATLALHGLT 101 (128)
T ss_dssp ECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCBCSBCCEEECSCC
T ss_pred EEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccCCCCeEEEEccCC
Confidence 689999876 4 899998421 112111 1 111211 36777765321 236799999999
Q ss_pred cCCCeeEEEEeeCC--CCeeEEEEEEE
Q psy3125 56 KRDAGIYECQVNTE--PKMNMAIMLNV 80 (163)
Q Consensus 56 ~~D~G~Y~C~~~~~--~~~~~~~~l~V 80 (163)
.+|+|.|+|.+.+. +.....+.|.|
T Consensus 102 ~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 102 VEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred chhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 99999999998543 34455555554
No 408
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=98.95 E-value=4.9e-09 Score=64.28 Aligned_cols=81 Identities=21% Similarity=0.302 Sum_probs=51.1
Q ss_pred CceEEecC---C-CcEEEEEecCC---e-eEEe--cceE-ec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL---G-RPVSWMRKRDL---H-ILTT--NIYT-YT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~---~-~~v~W~k~~~~---~-~~~~--~~~~-~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+... + ..|.|+|.... . ++.. +... .. ..+||.+..+.....++|.|.+++.+|+|.|.|.+.
T Consensus 18 L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~ 97 (116)
T 3bj9_1 18 LTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMG 97 (116)
T ss_dssp EEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCChhHCEEEEEEEe
Confidence 68999864 4 88999996431 2 2221 1111 11 247888875433346799999999999999999995
Q ss_pred CCCC--eeEEEEEEEE
Q psy3125 68 TEPK--MNMAIMLNVD 81 (163)
Q Consensus 68 ~~~~--~~~~~~l~V~ 81 (163)
.... ....+.|.|.
T Consensus 98 ~~~~~~fg~gT~L~V~ 113 (116)
T 3bj9_1 98 ARSTHVFGSGTQLTVL 113 (116)
T ss_dssp CSSCCEECCCEEEEEE
T ss_pred CCCCcEECCCEEEEEe
Confidence 4321 2233445554
No 409
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.94 E-value=8.7e-09 Score=66.32 Aligned_cols=79 Identities=14% Similarity=0.190 Sum_probs=59.9
Q ss_pred CCCceEeeCCCeEEEecCC--CCceeEEEEeCCCe------EEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCcc
Q psy3125 83 RGRGARLSAGPLLNFAFPD--LLTTNIYTYTGDAR------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 153 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~ 153 (163)
.+....+..|..+.+.|.. .+.+.+.|++++.. +.+.. .......|.|.+++..|+|.|+|.| |..|..+
T Consensus 47 ~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 125 (154)
T 1fhg_A 47 TILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDY-DEEGNCSLTISEVCGDDDAKYTCKAVNSLGEAT 125 (154)
T ss_dssp CCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE-CTTCEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEE-CCCCeEEEEECCCChhcCEEEEEEEEECCCeEE
Confidence 3445678889999999964 34567899987643 33222 1123467999999999999999999 8889999
Q ss_pred EEEEEEEec
Q psy3125 154 MAIMLNVDG 162 (163)
Q Consensus 154 ~~~~L~V~~ 162 (163)
..+.|.|..
T Consensus 126 ~~~~l~V~~ 134 (154)
T 1fhg_A 126 CTAELLVET 134 (154)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 999999874
No 410
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.94 E-value=1.1e-08 Score=64.14 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=58.0
Q ss_pred EEEEEcCCCceEeeCCCeEEEecCC-----CCceeEEEEeCCCe----EEEe----------------------cCC-C-
Q psy3125 77 MLNVDDRGRGARLSAGPLLNFAFPD-----LLTTNIYTYTGDAR----FSVI----------------------HPQ-N- 123 (163)
Q Consensus 77 ~l~V~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~----------------------~~~-~- 123 (163)
.+.|..++..+.+..|..+.+.|.. .....+.|++.... +... ... .
T Consensus 4 ~~~v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 83 (135)
T 1xt5_A 4 IMTVRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGR 83 (135)
T ss_dssp EEEEECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTT
T ss_pred EEEEeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCc
Confidence 3566666667778888889999852 34456788765432 1110 000 0
Q ss_pred -----CceEEEEecccCcCCCeeEEEEc-CCCC-----CccEEEEEEEecC
Q psy3125 124 -----SDEWNMKIDYAQKRDAGIYECQV-NTEP-----KMNMAIMLNVDGK 163 (163)
Q Consensus 124 -----~~~~~L~i~~v~~~D~G~Y~C~a-~~~~-----~~~~~~~L~V~~~ 163 (163)
.....|.|.+++.+|+|.|.|.+ +... .....+.|.|.|.
T Consensus 84 ~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g~ 134 (135)
T 1xt5_A 84 ASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 134 (135)
T ss_dssp EEESCTTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEETT
T ss_pred EEEecCCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEecC
Confidence 11356999999999999999999 5433 3348899999874
No 411
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.94 E-value=3e-09 Score=64.93 Aligned_cols=83 Identities=12% Similarity=0.108 Sum_probs=55.6
Q ss_pred EEEcCCCceEeeCCCeEEEecCC-CC--ce----eEEEEeCC-------------------CeEEEecCCC-C--ceEEE
Q psy3125 79 NVDDRGRGARLSAGPLLNFAFPD-LL--TT----NIYTYTGD-------------------ARFSVIHPQN-S--DEWNM 129 (163)
Q Consensus 79 ~V~~~~~~~~v~~~~~~~~~~~~-~~--~~----~~~~~~~~-------------------~~~~~~~~~~-~--~~~~L 129 (163)
.|..++. +.+..|..+.+.|.. .. .. .+.|++.+ .|+.+..... . ...+|
T Consensus 3 ~v~~p~~-v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL 81 (118)
T 3udw_C 3 VVQAPTQ-VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASL 81 (118)
T ss_dssp EEECCSE-EEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCE
T ss_pred EEeCCCe-EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEE
Confidence 3444443 667778888888864 21 11 47888763 2333322111 1 15679
Q ss_pred EecccCcCCCeeEEEEc-C-CCCCccEEEEEEEec
Q psy3125 130 KIDYAQKRDAGIYECQV-N-TEPKMNMAIMLNVDG 162 (163)
Q Consensus 130 ~i~~v~~~D~G~Y~C~a-~-~~~~~~~~~~L~V~~ 162 (163)
+|.+++.+|+|.|+|.+ + ..+..+..+.|.|..
T Consensus 82 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~ 116 (118)
T 3udw_C 82 RMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA 116 (118)
T ss_dssp EECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEeecChHHCeEEEEEEEECCCCCccceEEEEEEe
Confidence 99999999999999999 6 567778889999875
No 412
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.48 E-value=8.7e-11 Score=71.62 Aligned_cols=68 Identities=15% Similarity=0.339 Sum_probs=47.9
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEecc-eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTTNI-YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~~~-~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.+... ++.... .....++||.+..+...++++|.|.+++.+|+|.|.|.+.+
T Consensus 19 L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 92 (110)
T 1u3h_A 19 LNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAASA 92 (110)
Confidence 689998887 899999854221 111111 11224678887754345678999999999999999999954
No 413
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.94 E-value=4.3e-10 Score=76.25 Aligned_cols=139 Identities=10% Similarity=0.115 Sum_probs=75.6
Q ss_pred CceEEecCC----CcEEEEEecCCeeEEe--cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-ee
Q psy3125 1 MACTVMGLG----RPVSWMRKRDLHILTT--NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK-MN 73 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~~~~~~--~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-~~ 73 (163)
|.|.+.+.+ +.|.| + +..+... +......+++|. ...+|.|.+++.+|+|.|+|++.+... ..
T Consensus 24 L~C~~~g~~p~~~~~v~W-~--~~~~~~~~~~~~~~~~~g~~~-------~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~ 93 (214)
T 1ow0_A 24 LTCTLTGLRDASGVTFTW-T--PSSGKSAVQGPPERDLCGCYS-------VSSVLPGCAEPWNHGKTFTCTAAYPESKTP 93 (214)
T ss_dssp CEEEETTCCSCCCCCCCB-S--SCSSCCCEECCCCCCSTTCCC-------EEEECTTTHHHHHHTCEEEEEECCSSCSSC
T ss_pred EEEEEeeeECCCCeEEEE-c--CCCCCCcccCCceECCCCcEE-------EEEEEEEeHHHcCCCCeEEEEEecCCCCCc
Confidence 689999874 48999 5 2222110 000001122221 245799999999999999999954322 12
Q ss_pred EEEEEEE---EcCCCceE--------eeCCCeEEEecCCC---C-ceeEEEEeCCCeEEEe--------cCC--CCc---
Q psy3125 74 MAIMLNV---DDRGRGAR--------LSAGPLLNFAFPDL---L-TTNIYTYTGDARFSVI--------HPQ--NSD--- 125 (163)
Q Consensus 74 ~~~~l~V---~~~~~~~~--------v~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~--------~~~--~~~--- 125 (163)
....+.+ ..+ +.+. +..|..+.+.|... + ...+.|++++..+... ... ...
T Consensus 94 ~~~~i~~~~~~~~-P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~ 172 (214)
T 1ow0_A 94 LTATLSKSGNTFR-PEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFA 172 (214)
T ss_dssp EEEEEECCSSCCC-CEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEE
T ss_pred eeEeeccCCCCCC-CEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEE
Confidence 2223321 111 1221 23456688888642 2 3478899876532110 110 111
Q ss_pred -eEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 126 -EWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 126 -~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
...|.|.....+|.|.|+|.| +...
T Consensus 173 ~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 173 VTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred EEEEEEECHHHccCCCEEEEEEECCCC
Confidence 234556665556799999999 6543
No 414
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.94 E-value=6.5e-09 Score=65.19 Aligned_cols=79 Identities=22% Similarity=0.341 Sum_probs=49.9
Q ss_pred CceEEec---CC-CcEEEEEecCCe---eEEecce----------------EecCC--CeEEEeccCCCCeEEEEEcccC
Q psy3125 1 MACTVMG---LG-RPVSWMRKRDLH---ILTTNIY----------------TYTGD--ARFSVIHPQNSDEWNMKIDYAQ 55 (163)
Q Consensus 1 l~C~~~~---~~-~~v~W~k~~~~~---~~~~~~~----------------~~~~~--~r~~~~~~~~~~~~~L~i~~v~ 55 (163)
|+|.+.. .+ +.|.|+|.+... ++..... ..... +|+.+.. ..+.+|.|.+++
T Consensus 24 L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~~~sL~I~~v~ 100 (135)
T 1xt5_A 24 LPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN---LAAPTLRLTHVH 100 (135)
T ss_dssp ECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESC---TTSCCEEECSCC
T ss_pred EeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEec---CCCCeEEECCCC
Confidence 6899864 45 899999965431 2221100 00122 6777653 246789999999
Q ss_pred cCCCeeEEEEeeCCC------CeeEEEEEEEEc
Q psy3125 56 KRDAGIYECQVNTEP------KMNMAIMLNVDD 82 (163)
Q Consensus 56 ~~D~G~Y~C~~~~~~------~~~~~~~l~V~~ 82 (163)
.+|+|.|.|.+.+.. .....+.|.|..
T Consensus 101 ~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 101 PQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp GGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred hhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 999999999995422 123566676654
No 415
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.94 E-value=2.3e-09 Score=70.51 Aligned_cols=74 Identities=19% Similarity=0.379 Sum_probs=52.6
Q ss_pred CceEEecCC--CcEEEEEec--CCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccC-cCCCeeEEEEe-eCCCCeeE
Q psy3125 1 MACTVMGLG--RPVSWMRKR--DLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQ-KRDAGIYECQV-NTEPKMNM 74 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~--~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~~-~~~~~~~~ 74 (163)
|.|.+.+.| +.|.|+|.+ +..++.. ..++|+.+.. ..+..+|.|.+++ .+|+|.|+|.+ +..+....
T Consensus 103 l~C~~~g~p~~~~i~W~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~ 175 (184)
T 3b5h_A 103 LVCKSESVPPVTDWAWYKITDSEDKALMN-----GSESRFFVSS--SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQA 175 (184)
T ss_dssp EEEECCCSSCCCEEEEEECCSSSCEECCT-----TGGGTEEEEE--ETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEE
T ss_pred EEEEECCCCCCCeEEEEEcCCCCCEEeec-----CCCCEEEEEe--cCCeeEEEEeeccccccCceEEEEEEeCCCcceE
Confidence 579999988 899999832 2222110 1236787775 2356789999999 99999999999 45556666
Q ss_pred EEEEEEE
Q psy3125 75 AIMLNVD 81 (163)
Q Consensus 75 ~~~l~V~ 81 (163)
.+.|.|.
T Consensus 176 ~~~l~V~ 182 (184)
T 3b5h_A 176 IITLRVR 182 (184)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 6777765
No 416
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.94 E-value=2.5e-09 Score=63.60 Aligned_cols=75 Identities=20% Similarity=0.331 Sum_probs=54.9
Q ss_pred eEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCC-----CceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 87 ARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQN-----SDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 87 ~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
..+..|..+.+.|.. .+.+.+.|++++..+....... .....|.|.+++.+|+|.|+|.| |..|..+..+.|
T Consensus 18 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 97 (100)
T 3caf_A 18 HAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHL 97 (100)
T ss_dssp EEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEE
Confidence 456678888998864 3456788998765433211111 12346999999999999999999 888999999998
Q ss_pred EEe
Q psy3125 159 NVD 161 (163)
Q Consensus 159 ~V~ 161 (163)
.|.
T Consensus 98 ~Vv 100 (100)
T 3caf_A 98 DVV 100 (100)
T ss_dssp EEC
T ss_pred EEC
Confidence 873
No 417
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.93 E-value=1.5e-09 Score=73.18 Aligned_cols=71 Identities=10% Similarity=0.057 Sum_probs=42.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~l 78 (163)
|.|.+.|.| |.|.|+|.++..+.. ...++|+.+.. +..-..|.|.+++.+|+|.|+|.+.+.......+++
T Consensus 126 l~C~~~G~P~P~v~W~~~~~~~~~~-----~~~~~r~~~~~--~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v~v 197 (203)
T 4fa8_A 126 VTCTVNAFPHPHVQWLMPEGVEPAP-----TAANGGVMKEK--DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVYV 197 (203)
T ss_dssp EEEEEEEESCCEEEECCC-----------------CCEECT--TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEECCeeecCc-----ccccceEEEeC--CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEEE
Confidence 689999999 999998743322111 11245666554 223345667899999999999999554333333343
No 418
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.93 E-value=5.1e-09 Score=64.30 Aligned_cols=68 Identities=16% Similarity=0.423 Sum_probs=47.4
Q ss_pred CceEEecCC---CcEEEEEecCCe----eEEecc----eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH----ILTTNI----YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~----~~~~~~----~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ ..|.|+|..... ++.... .... ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 99 (117)
T 2yc1_A 20 LSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSLRAEDTAVYYCARG 99 (117)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 689998653 789999965321 222111 1111 246999886544678999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (117)
T 2yc1_A 100 G 100 (117)
T ss_dssp E
T ss_pred e
Confidence 4
No 419
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.93 E-value=5.5e-09 Score=63.90 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=45.8
Q ss_pred CceEEecCC-------CcEEEEEecCC---eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-------RPVSWMRKRDL---HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-------~~v~W~k~~~~---~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ +.|.|+|.... ..+....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 98 (114)
T 1eeq_A 21 INCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSG--SGTDFTLTISSLQAEDVAVYYCQQYY 98 (114)
T ss_dssp EEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEee--cCCEEEEEECCCCcccCEEEEEEEee
Confidence 579988764 68999996432 2222111111 1257888764 34688999999999999999999954
No 420
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=98.93 E-value=1.7e-09 Score=66.59 Aligned_cols=81 Identities=10% Similarity=0.120 Sum_probs=51.2
Q ss_pred CceEEecC------C-CcEEEEEecCC--eeEEecc-eE---ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL------G-RPVSWMRKRDL--HILTTNI-YT---YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~------~-~~v~W~k~~~~--~~~~~~~-~~---~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+... . ..|.|+|...+ .++.... .. ....+|+.+..+...++++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~~~~~v~W~~~~~g~~~~v~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~v~ 99 (119)
T 1qfo_A 20 IPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKDLKPEDSGTYNFRFE 99 (119)
T ss_dssp ECCEEECCTTSCC--CCEEEEEESTTTTCEEEEESSCGGGSCTTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeeCCCccCCCCCeEEEEEEcCCCCCCEEEECCCCcccCccceeeEEEeCCCCCCEEEEEEccCCcccCceEEEEEE
Confidence 67988742 2 67899996532 1232221 10 11246998876434568899999999999999999996
Q ss_pred CCCC----eeEEEEEEEE
Q psy3125 68 TEPK----MNMAIMLNVD 81 (163)
Q Consensus 68 ~~~~----~~~~~~l~V~ 81 (163)
..+. ....+.|.|.
T Consensus 100 ~~~~~~~~~~~~~~L~V~ 117 (119)
T 1qfo_A 100 ISDSNRWLDVKGTTVTVT 117 (119)
T ss_dssp CC-CCEEECSSCEEEEEE
T ss_pred eCCCceecccCCeEEEEe
Confidence 5421 1134556654
No 421
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.93 E-value=1.3e-09 Score=71.96 Aligned_cols=69 Identities=28% Similarity=0.494 Sum_probs=48.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCe-eEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKM-NMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~-~~~~~ 77 (163)
|.|.+.+.| +.+.|+| ++.. +....++.+.. +.+|.|.+++.+|+|.|+|.+.+ .+.. +..+.
T Consensus 120 l~C~~~g~p~~~v~W~~--~~~~-------~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~ 185 (192)
T 2iep_A 120 LPCTTMGNPKPSVSWIK--GDSA-------LRENSRIAVLE-----SGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVK 185 (192)
T ss_dssp ECCEEEEESCCEEEEEE--TTEE-------CCCCSSEEECT-----TSCEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEEeccCCceEEEEe--CCEE-------ccCCCcEEEec-----CCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEE
Confidence 579999999 9999998 3322 22344555543 23699999999999999999954 4333 44577
Q ss_pred EEEEcC
Q psy3125 78 LNVDDR 83 (163)
Q Consensus 78 l~V~~~ 83 (163)
|.|..+
T Consensus 186 l~V~~p 191 (192)
T 2iep_A 186 LEVEVF 191 (192)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 777654
No 422
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.93 E-value=8.4e-10 Score=68.07 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=32.1
Q ss_pred eEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEec
Q psy3125 126 EWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 126 ~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~ 162 (163)
..+|.|++++.+|+|.|+|.+ +..+.....+.|.|..
T Consensus 88 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 88 DASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 356999999999999999999 7667778889998864
No 423
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.93 E-value=1e-09 Score=67.24 Aligned_cols=69 Identities=17% Similarity=0.340 Sum_probs=47.1
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEecc--e--EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTNI--Y--TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~~--~--~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|.+.+.+ ..+.|+|...+ . ++.... . ....++||.+..+...+.++|.|.+++.+|+|.|.|.+...
T Consensus 19 L~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~ 98 (114)
T 1u9k_A 19 VKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQVTDSGLYRCVIYHP 98 (114)
T ss_dssp EEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred EEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCCChHHCEEEEEEEecC
Confidence 579887543 57999996432 1 222111 0 11124799887644456899999999999999999999553
No 424
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.92 E-value=3.1e-09 Score=82.18 Aligned_cols=70 Identities=17% Similarity=0.368 Sum_probs=56.9
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.|.| |.|.|+| ++..+....|+.+... .+..+|.|.++.++|+|.|+|.+ |..+..+..+.|
T Consensus 502 ~~~~v~g~P~P~v~W~k---------~~~el~~s~~~~i~~~--~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l 570 (573)
T 3uto_A 502 FYCRVIASSPPVVTWHK---------DDRELKQSVKYMKRYN--GNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 570 (573)
T ss_dssp EEEEEECSSCCEEEEEE---------TTEECCSSSSEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCeEEEEE---------CCEEcccCCcEEEEEc--CCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEE
Confidence 579999999 9999998 3333345678888763 46889999999999999999999 667778888888
Q ss_pred EEE
Q psy3125 79 NVD 81 (163)
Q Consensus 79 ~V~ 81 (163)
+|.
T Consensus 571 ~Vt 573 (573)
T 3uto_A 571 NVT 573 (573)
T ss_dssp EEC
T ss_pred EEC
Confidence 773
No 425
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=4.2e-09 Score=64.68 Aligned_cols=79 Identities=13% Similarity=0.164 Sum_probs=57.2
Q ss_pred CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCC--CCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 84 GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQ--NSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
+....+..|..+.+.|.. .+...+.|++++..+...... ......|.|.+++.+|+|.|+|.| |..|..+..+.|
T Consensus 15 p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 94 (118)
T 2eo9_A 15 PVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYI 94 (118)
T ss_dssp CCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEEEECCE
T ss_pred CCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEE
Confidence 344567788999999974 345678999876543210000 001226999999999999999999 888998889999
Q ss_pred EEec
Q psy3125 159 NVDG 162 (163)
Q Consensus 159 ~V~~ 162 (163)
.|..
T Consensus 95 ~V~~ 98 (118)
T 2eo9_A 95 EVQE 98 (118)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8875
No 426
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=98.92 E-value=7.8e-09 Score=63.91 Aligned_cols=68 Identities=18% Similarity=0.370 Sum_probs=46.6
Q ss_pred CceEEecCC---CcEEEEEecCCe----eEEe---cceE-e--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH----ILTT---NIYT-Y--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~----~~~~---~~~~-~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ ..|.|+|..... ++.. +... . ...+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 99 (121)
T 1j05_H 20 LSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPF 99 (121)
T ss_dssp EEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 689998653 789999965321 1211 1111 1 1246898875433568899999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (121)
T 1j05_H 100 G 100 (121)
T ss_dssp B
T ss_pred c
Confidence 4
No 427
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.92 E-value=2.6e-09 Score=73.15 Aligned_cols=68 Identities=15% Similarity=0.355 Sum_probs=47.7
Q ss_pred CceEEecCC-CcEEEEEecCC---e-eEEe-cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---H-ILTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~-~~~~-~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.+.. . ++.. .......++||.+..+......+|.|.+++.+|+|.|+|.+.+
T Consensus 147 L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 220 (238)
T 2p1y_A 147 LNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAID 220 (238)
T ss_dssp EEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEE
T ss_pred EEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEee
Confidence 689999999 99999996421 1 1111 1111123568887643345678999999999999999999954
No 428
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.92 E-value=4.9e-09 Score=70.69 Aligned_cols=83 Identities=17% Similarity=0.255 Sum_probs=56.4
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEec-ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC----C
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTTN-IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE----P 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~~-~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~----~ 70 (163)
|.|.+.+.. ..|.|+|+..+. ++... .......+||.+..+...++++|.|.+++.+|+|.|.|.+... .
T Consensus 20 L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~ 99 (203)
T 2bnu_A 20 LNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGDSATYLCAVRPTSGGSY 99 (203)
T ss_dssp EEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGGCEEEEEEEEECSSSTT
T ss_pred EEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCcccCeEEEEEEEcCcCcce
Confidence 679998877 789999965321 22211 1111235799987654567899999999999999999999542 1
Q ss_pred --CeeEEEEEEEEcC
Q psy3125 71 --KMNMAIMLNVDDR 83 (163)
Q Consensus 71 --~~~~~~~l~V~~~ 83 (163)
.....+.|.|...
T Consensus 100 ~~~~g~gt~L~V~~~ 114 (203)
T 2bnu_A 100 IPTFGRGTSLIVHPY 114 (203)
T ss_dssp CCEECCCEEEEEECC
T ss_pred eeeeCCCEEEEEeCC
Confidence 1123457777753
No 429
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=5.9e-09 Score=62.36 Aligned_cols=76 Identities=18% Similarity=0.204 Sum_probs=54.1
Q ss_pred CCCceEeeCCCeEEEecCC-CCceeEEEEeCCCe------EEEecCCCCceEEEEecccCcCCCeeEEEEcCCCCCccEE
Q psy3125 83 RGRGARLSAGPLLNFAFPD-LLTTNIYTYTGDAR------FSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMA 155 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~~~~ 155 (163)
.+....+..|..+.+.|.. .+...+.|++++.. +.+.. ......|.|.+++.+|+|.|+|.|.+ .+..
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~~~v~W~k~g~~~~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n---~~~~ 88 (103)
T 2edf_A 14 PLEDQWVAPGEDVELRCELSRAGTPVHWLKDRKAIRKSQKYDVVC--EGTMAMLVIRGASLKDAGEYTCEVEA---SKST 88 (103)
T ss_dssp CCCCEEECTTSCEEECCEESSSSCCCCEEESSCBCCCSSSEEEEE--ETTEEEEEESSCCTTTCSEEEEECSS---CEEE
T ss_pred cCCccEEcCCCCEEEEEEEeCCCCcEEEEECCEEccCCCCEEEEE--CCCEEEEEECCCCcccCEEEEEEEcc---CCcE
Confidence 3445677788889999963 24457889887653 33332 12356799999999999999999933 4778
Q ss_pred EEEEEecC
Q psy3125 156 IMLNVDGK 163 (163)
Q Consensus 156 ~~L~V~~~ 163 (163)
+.|.|..+
T Consensus 89 ~~l~V~~~ 96 (103)
T 2edf_A 89 ASLHVEEK 96 (103)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 88888753
No 430
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.91 E-value=2.8e-09 Score=64.66 Aligned_cols=68 Identities=21% Similarity=0.260 Sum_probs=46.4
Q ss_pred CceE-EecCC--CcEEEEEecCC-eeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACT-VMGLG--RPVSWMRKRDL-HILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~-~~~~~--~~v~W~k~~~~-~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|. +.+.+ ..|.|+|.... ..+....... ...+||.+..+...+.++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 93 (109)
T 1pew_A 20 ISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYD 93 (109)
T ss_dssp EEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEe
Confidence 6799 77664 78999986521 1121111111 12478988754456789999999999999999999954
No 431
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.91 E-value=2.6e-09 Score=68.19 Aligned_cols=80 Identities=14% Similarity=0.283 Sum_probs=53.2
Q ss_pred CceEEecCC-CcEEEEEecCC---e-eEEecceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC-Cee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---H-ILTTNIYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP-KMN 73 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~-~~~~~~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~-~~~ 73 (163)
|.|.+.+.+ ..|.|+|.... . ++...... ....+||.+.. ..++++|.|.+++.+|+|.|.|.+.+.. ...
T Consensus 20 L~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~--~~~~~sL~I~~l~~~DsG~Y~C~~~~~~~~fg 97 (143)
T 3u6r_L 20 LSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSG--SGTDFTLTISNLEPEDFAVYYCQQRSDWVTFG 97 (143)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEECSSBCEEC
T ss_pred EEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEc--cCCEEEEEEccCcccCCEEEEEEEecCCCEEC
Confidence 689999887 88999996421 2 22222111 11257888874 3468999999999999999999995432 223
Q ss_pred EEEEEEEEc
Q psy3125 74 MAIMLNVDD 82 (163)
Q Consensus 74 ~~~~l~V~~ 82 (163)
..+.|.|..
T Consensus 98 ~gt~L~V~~ 106 (143)
T 3u6r_L 98 GGTKVEIKA 106 (143)
T ss_dssp CCEEEEEC-
T ss_pred CCEEEEECC
Confidence 345566654
No 432
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.91 E-value=2.3e-09 Score=77.71 Aligned_cols=74 Identities=14% Similarity=0.185 Sum_probs=50.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccC-----CCCeEEEEEcccCcCCCeeEEEEe-eCCCCee
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQ-----NSDEWNMKIDYAQKRDAGIYECQV-NTEPKMN 73 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~ 73 (163)
|.|.+.|.| +.|.|+| ++..+. ...+....... ...+.+|.|.+++.+|+|.|+|.| +..+..+
T Consensus 266 l~C~~~g~P~p~i~W~~--~g~~l~-------~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 336 (347)
T 2ifg_A 266 IPFSVDGQPAPSLRWLF--NGSVLN-------ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 336 (347)
T ss_dssp EEEEEEEESCCEEEEEE--TTEECC-------CCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEeeecCCCcEEEEe--CCEECC-------CCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCcee
Confidence 579999999 9999998 333332 11122211100 123678999999999999999999 5566667
Q ss_pred EEEEEEEEcC
Q psy3125 74 MAIMLNVDDR 83 (163)
Q Consensus 74 ~~~~l~V~~~ 83 (163)
..+.|.|.++
T Consensus 337 ~~~~l~V~~~ 346 (347)
T 2ifg_A 337 ASIMAAFMDN 346 (347)
T ss_dssp EEEEECSCCC
T ss_pred eEEEEEecCC
Confidence 7777776554
No 433
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=67.77 Aligned_cols=68 Identities=22% Similarity=0.355 Sum_probs=47.5
Q ss_pred CceEEecC---C-CcEEEEEecCC---e-eEE--ecceE-ec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL---G-RPVSWMRKRDL---H-ILT--TNIYT-YT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~---~-~~v~W~k~~~~---~-~~~--~~~~~-~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. . ..|.|+|...+ . ++. .+... .. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~~~ 99 (126)
T 2h32_A 20 LTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMG 99 (126)
T ss_dssp EEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCCChhHCEEEEEEEE
Confidence 67999875 3 78999996432 2 222 12211 11 146999885444568999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (126)
T 2h32_A 100 A 100 (126)
T ss_dssp C
T ss_pred c
Confidence 3
No 434
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.91 E-value=4.5e-09 Score=63.94 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=45.5
Q ss_pred CceEEecCC-----CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-----RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ +.|.|+|...+ ..+........ ..+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 96 (111)
T 1j05_L 21 MSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG--SRTDFTLIIDPVEADDVATYYCQQTN 96 (111)
T ss_dssp EEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc--cCCEEEEEECCCCcccCEEEEEEEec
Confidence 679988764 68999996432 22221111111 246888764 34688999999999999999999954
No 435
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.91 E-value=2.1e-08 Score=60.97 Aligned_cols=73 Identities=21% Similarity=0.261 Sum_probs=54.7
Q ss_pred CceEeeCCCeEEEecCCCCceeEEEEeCCC------eEEEecCCCCceEEEEecccCcCCCeeEEEEcCCCCCccEEEEE
Q psy3125 85 RGARLSAGPLLNFAFPDLLTTNIYTYTGDA------RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 158 (163)
Q Consensus 85 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~~~~~~L 158 (163)
....+..|..+.+.|.....+.+.|++++. ++.+.. ......|.|.+++.+|+|.|+|.| +..+..+.|
T Consensus 27 ~~~~v~~G~~v~l~C~~~~~p~v~W~k~~~~l~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a---~~~~~~~~l 101 (113)
T 2edh_A 27 RNEEATEGATAVLRCELSKMAPVEWWKGHETLRDGDRHSLRQ--DGARCELQIRGLVAEDAGEYLCMC---GKERTSAML 101 (113)
T ss_dssp CCCEECTTSCEEEEEEESSCCCCEEEESSSBCCCSSSEEEEE--ETTEEEEEECSCCSTTCEEEEEEE---TTEEEEEEE
T ss_pred CceEEeCCCeEEEEEEECCCCcEEEEECCEECCCCCcEEEEE--CCCEEEEEECCCChhhCEEEEEEe---CCCCEEEEE
Confidence 345677788899999754446788988765 333332 123557999999999999999999 677788889
Q ss_pred EEec
Q psy3125 159 NVDG 162 (163)
Q Consensus 159 ~V~~ 162 (163)
.|..
T Consensus 102 ~V~~ 105 (113)
T 2edh_A 102 TVRA 105 (113)
T ss_dssp EECC
T ss_pred EEeC
Confidence 8875
No 436
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.90 E-value=8e-09 Score=63.77 Aligned_cols=68 Identities=18% Similarity=0.299 Sum_probs=47.4
Q ss_pred CceEEecCC---CcEEEEEecCCe----eEEec---ce-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH----ILTTN---IY-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~----~~~~~---~~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..|.|+|..... ++... .. ... ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 99 (120)
T 1mfa_H 20 MSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSLTSEDSAVYYCTRG 99 (120)
T ss_dssp EEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 689998643 789999864321 22211 11 111 246999886544678999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (120)
T 1mfa_H 100 G 100 (120)
T ss_dssp E
T ss_pred c
Confidence 4
No 437
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.90 E-value=5.5e-09 Score=64.64 Aligned_cols=68 Identities=19% Similarity=0.410 Sum_probs=47.4
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEecc---eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTNI---YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~~---~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ ..|.|+|.... . ++.... .... ..+||.+..+...++++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 99 (121)
T 1kxv_C 20 LSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKPDDTAMYYCKPSL 99 (121)
T ss_dssp EEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 689998653 67999996432 1 222111 1111 2469998875445689999999999999999999943
No 438
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=98.90 E-value=5.4e-09 Score=64.50 Aligned_cols=68 Identities=16% Similarity=0.441 Sum_probs=47.0
Q ss_pred CceEEecCC---CcEEEEEecCCe----eEEec---ce-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLH----ILTTN---IY-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~----~~~~~---~~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ ..|.|+|..... ++... .. ... ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 99 (120)
T 3b9v_A 20 LSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARW 99 (120)
T ss_dssp EEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 689998643 789999965321 22211 11 111 246999886434568899999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (120)
T 3b9v_A 100 G 100 (120)
T ss_dssp C
T ss_pred c
Confidence 4
No 439
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.90 E-value=3.2e-09 Score=64.03 Aligned_cols=78 Identities=9% Similarity=0.091 Sum_probs=54.4
Q ss_pred CCceEeeCCCeEEEecCC----CCceeEEEEeCCCeEEEe-----cCCCC-------ceEEEEecccCcCCCeeEEEEc-
Q psy3125 84 GRGARLSAGPLLNFAFPD----LLTTNIYTYTGDARFSVI-----HPQNS-------DEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
+....+..|..+.+.|.. .+...+.|++++..+... ..... ....|.|.+++.+|+|.|+|.|
T Consensus 17 p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 96 (112)
T 3so5_A 17 PETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVIS 96 (112)
T ss_dssp CCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEE
Confidence 444567788889999963 234678898876532100 01111 1467999999999999999999
Q ss_pred CCCCC-ccEEEEEEEe
Q psy3125 147 NTEPK-MNMAIMLNVD 161 (163)
Q Consensus 147 ~~~~~-~~~~~~L~V~ 161 (163)
|..|. .+..+.|.|.
T Consensus 97 n~~g~~~s~~~~l~V~ 112 (112)
T 3so5_A 97 NHFGSSYSVXAXLTIN 112 (112)
T ss_dssp ETTEEEECCCEEEEEC
T ss_pred eCCCcEEEeEEEEEeC
Confidence 87777 5688888873
No 440
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=98.90 E-value=9.5e-09 Score=62.72 Aligned_cols=66 Identities=20% Similarity=0.355 Sum_probs=45.5
Q ss_pred CceEEecCC------CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG------RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~------~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ ..|.|+|.... ..+........ ..+||.+.. ..++++|.|.+++.+|+|.|.|.+.+
T Consensus 21 L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~DsG~Y~C~~~~ 97 (113)
T 1dlf_L 21 ISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG--SGTDFTLKISRVEAEDLGVYFCSQST 97 (113)
T ss_dssp EEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEc--cCCEEEEEECCCChHHCEEEEEEEec
Confidence 579988653 68999986432 22222111111 246888764 34688999999999999999999954
No 441
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.90 E-value=1.4e-09 Score=74.43 Aligned_cols=82 Identities=16% Similarity=0.269 Sum_probs=48.9
Q ss_pred CceEEecCC-CcEEEEEe---cCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEE
Q psy3125 1 MACTVMGLG-RPVSWMRK---RDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMA 75 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~ 75 (163)
|.|.+.+.| +.+.|+|. ++..+...+.........+ .........+|.|.+++.+|+|.|+|.+. ..+.....
T Consensus 134 L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 211 (241)
T 3grw_A 134 FHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSW--ISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKA 211 (241)
T ss_dssp EEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEE--ECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEe--eeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEE
Confidence 579999999 99999983 2222211111000000000 01111236689999999999999999994 45666777
Q ss_pred EEEEEEcCC
Q psy3125 76 IMLNVDDRG 84 (163)
Q Consensus 76 ~~l~V~~~~ 84 (163)
+.|.|..++
T Consensus 212 ~~l~V~~~p 220 (241)
T 3grw_A 212 FWLSVHGPR 220 (241)
T ss_dssp EEEEC----
T ss_pred EEEEecCCC
Confidence 888887664
No 442
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=9.5e-10 Score=65.14 Aligned_cols=75 Identities=11% Similarity=0.179 Sum_probs=54.7
Q ss_pred CCceEeeCCCeEEEecCC--CCceeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC--CccEEEEE
Q psy3125 84 GRGARLSAGPLLNFAFPD--LLTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP--KMNMAIML 158 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~--~~~~~~~L 158 (163)
+....+..|..+.+.|.. .+.+.+.|++++..+.. .....|.|.+++.+|+|.|+|.| |..+ ..+..+.|
T Consensus 17 p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v 91 (96)
T 2ens_A 17 PEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPL-----PPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91 (96)
T ss_dssp STTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSS-----CCCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEEE
T ss_pred CCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcC-----CCCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEE
Confidence 334567889999999974 34457889887664321 12446999999999999999999 6444 35667888
Q ss_pred EEecC
Q psy3125 159 NVDGK 163 (163)
Q Consensus 159 ~V~~~ 163 (163)
.|.++
T Consensus 92 ~V~~~ 96 (96)
T 2ens_A 92 SIIEP 96 (96)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 88764
No 443
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.90 E-value=7.7e-09 Score=62.35 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=30.9
Q ss_pred eEEEEecccCcCCCeeEEEEc-CCCCCccEEEEEEEecC
Q psy3125 126 EWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIMLNVDGK 163 (163)
Q Consensus 126 ~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L~V~~~ 163 (163)
..+|+|.+++.+|+|.|.|.+ +..+.....+.|.|..|
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~l~V~V~ 109 (109)
T 2oyp_A 71 DVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELKLDIK 109 (109)
T ss_dssp BCCEEECSCCGGGCEEEEEEECCSSTTCCEEEEEEEEEC
T ss_pred cEeEEEccCCChhCeEEEEEEEcCCcccceEEEEEEEeC
Confidence 457999999999999999999 65556666777777654
No 444
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.89 E-value=1.1e-08 Score=70.45 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=52.0
Q ss_pred CceEEecCC---CcEEEEEecCCeeE----Ee---cceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHIL----TT---NIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~----~~---~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ +.|.|+|.++...+ .. +...+ ...+|+.+..+......+|.|.+++.+|+|.|+|.+.+
T Consensus 142 L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 221 (242)
T 2znx_A 142 LTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXD 221 (242)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETT
T ss_pred EEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccC
Confidence 689999875 78999996422211 10 11111 12568887754345678999999999999999999964
Q ss_pred CCCeeEEEEEEEE
Q psy3125 69 EPKMNMAIMLNVD 81 (163)
Q Consensus 69 ~~~~~~~~~l~V~ 81 (163)
.........|.|.
T Consensus 222 ~~~fG~gt~l~v~ 234 (242)
T 2znx_A 222 GDYXGQGTLVTVS 234 (242)
T ss_dssp SSCBCCCEEEEEC
T ss_pred CcccCCCeEEEEE
Confidence 3233334445444
No 445
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=98.89 E-value=6.5e-09 Score=64.15 Aligned_cols=69 Identities=14% Similarity=0.297 Sum_probs=47.3
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEec---ce-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTN---IY-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~---~~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.+.+ ..|.|+|.... . ++... .. ... ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~ 99 (120)
T 1n4x_H 20 ISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRD 99 (120)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 689998643 78999996532 1 22111 11 111 246898876433568899999999999999999996
Q ss_pred CC
Q psy3125 68 TE 69 (163)
Q Consensus 68 ~~ 69 (163)
..
T Consensus 100 ~~ 101 (120)
T 1n4x_H 100 RH 101 (120)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 446
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.89 E-value=3.8e-09 Score=66.60 Aligned_cols=67 Identities=16% Similarity=0.306 Sum_probs=41.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEe--cCCCeEEEecc-CCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTY--TGDARFSVIHP-QNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~--~~~~r~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.| +.|.|+|.+....... .... ....++.+... ....+.+|.|.+++.+|+|.|+|.+.+
T Consensus 41 L~C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 111 (137)
T 3qr2_A 41 LHCEAVGSPVPEIQWWFEGQGPNDIC-SQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASN 111 (137)
T ss_dssp EEEEEECSSCCEEEEEEEESSTTCCC-EECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEEEeeecCCeEEEEECCCCccccc-eeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEe
Confidence 689999999 9999998432211000 0000 00224443321 112367899999999999999999954
No 447
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.89 E-value=2.7e-07 Score=61.27 Aligned_cols=103 Identities=11% Similarity=0.080 Sum_probs=69.5
Q ss_pred eEEEEEcccCcCCCeeEEEEeeCC-CCeeEEEEEEEEcCCCce-------EeeCCCeEEEecCCC---Cc--eeEEEEeC
Q psy3125 46 EWNMKIDYAQKRDAGIYECQVNTE-PKMNMAIMLNVDDRGRGA-------RLSAGPLLNFAFPDL---LT--TNIYTYTG 112 (163)
Q Consensus 46 ~~~L~i~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~~-------~v~~~~~~~~~~~~~---~~--~~~~~~~~ 112 (163)
...|.|.+++. | |.|.|+++.. ......+.|.|...|..+ .+..|..+.+.|... +. ..+.|+++
T Consensus 49 ~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg 126 (185)
T 1iam_A 49 RKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRG 126 (185)
T ss_dssp EEEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEET
T ss_pred eeEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeC
Confidence 34589999984 4 9999999654 456677788888765443 355678899999632 22 24799998
Q ss_pred CCeEEEecC-CCCceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 113 DARFSVIHP-QNSDEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 113 ~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
+..+..... .......|++...+.+|...|+|+| +..+
T Consensus 127 ~~~l~~~~~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 127 EKELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp TEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred CEEcccccCCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 876654321 1123446777766666666999999 5533
No 448
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=98.89 E-value=1.5e-08 Score=62.97 Aligned_cols=68 Identities=18% Similarity=0.412 Sum_probs=47.6
Q ss_pred CceEEecC--C-CcEEEEEecCC---e-eEEe---c--ce-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEE
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---H-ILTT---N--IY-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQ 65 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~-~~~~---~--~~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 65 (163)
|.|.+.+. . ..|.|+|...+ . ++.. . .. .+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~y~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~ 99 (124)
T 1dlf_H 20 LSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQMNTLRAEDTGIYYCT 99 (124)
T ss_dssp EEEEEESSCTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred EEeECCCccCCCCeEEEEEECCCCCceEEEEEEeccCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCCHHHCEEEEEE
Confidence 68999854 2 78999996532 1 2222 1 11 121 2479998865445689999999999999999999
Q ss_pred eeC
Q psy3125 66 VNT 68 (163)
Q Consensus 66 ~~~ 68 (163)
+..
T Consensus 100 ~~~ 102 (124)
T 1dlf_H 100 GIY 102 (124)
T ss_dssp EEB
T ss_pred EEe
Confidence 954
No 449
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.89 E-value=2.5e-08 Score=63.49 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=55.5
Q ss_pred CCceEeeCCCeEEEecCCC--CceeEEEEeCC--------------CeEEEecCCCCceEEEEecccCcCCCeeEEEEc-
Q psy3125 84 GRGARLSAGPLLNFAFPDL--LTTNIYTYTGD--------------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV- 146 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~--------------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a- 146 (163)
+....+..|..+.+.|... +...+.|+..+ .|+.+... ......|.|.+++.+|+|.|+|.|
T Consensus 45 p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~ 123 (145)
T 1z9m_A 45 TSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTS-TPHELSISISNVALADEGEYTCSIF 123 (145)
T ss_dssp CCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEE-CSSEEEEEECSCCGGGCEEEEEEEC
T ss_pred CceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecC-CCCeEEEEECCCChhhCEEEEEEEE
Confidence 3456677888899999642 34577887432 23332221 223578999999999999999999
Q ss_pred CCCCCccEEEEEEEec
Q psy3125 147 NTEPKMNMAIMLNVDG 162 (163)
Q Consensus 147 ~~~~~~~~~~~L~V~~ 162 (163)
+. +..+..+.|.|..
T Consensus 124 n~-~~~~~~~~L~V~~ 138 (145)
T 1z9m_A 124 TM-PVRTAKSLVTVLG 138 (145)
T ss_dssp SS-SCEEEEEEEEEEC
T ss_pred cC-CCceEEEEEEEEe
Confidence 76 8888999999875
No 450
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=98.89 E-value=5e-09 Score=63.42 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=50.4
Q ss_pred CceEEecCC--CcEEEEEecCCe---eEEe-cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLH---ILTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~---~~~~-~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|...... ..+.|+|...+. ++.. +.......+||.+... ..+.++|.|.+++.+|+|.|.|.+.... ..
T Consensus 17 l~C~~s~~~~~~~~~Wyrq~~g~~~~li~~~~~~~~~~~~R~s~~~~-~~~~~~L~I~~l~~~Dsg~Y~C~~~~~~~~d~ 95 (106)
T 2frg_P 17 VQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGEYGCMVDGARGPQI 95 (106)
T ss_dssp EEEECCGGGTTSEEEEEEEETTEEEEEEECCBTCEEEETTTEEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEeEecCCcccCcEEEEECCCCCCcEEEEeCCcEeeecCCCEEEEcC-CCCEEEEEEccCCHHHCEEEEEEeecCCCCCE
Confidence 578886332 568899975442 1111 1111223579987532 3467999999999999999999995433 22
Q ss_pred eEEEEEEEE
Q psy3125 73 NMAIMLNVD 81 (163)
Q Consensus 73 ~~~~~l~V~ 81 (163)
...+.|.|.
T Consensus 96 ~~~v~L~V~ 104 (106)
T 2frg_P 96 LHRVSLNIL 104 (106)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEe
Confidence 345555554
No 451
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.89 E-value=6.8e-09 Score=62.56 Aligned_cols=76 Identities=12% Similarity=0.208 Sum_probs=43.2
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEecceEecCCCeEEEecc-CCCCeEEEEEcccCcCCCeeEEEEeeC-CCC-eeE
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTTNIYTYTGDARFSVIHP-QNSDEWNMKIDYAQKRDAGIYECQVNT-EPK-MNM 74 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~-~~~ 74 (163)
|.|.+.+.+ +.+.|+| +...+..... ....++..... ......+|.|.+++.+|+|.|+|.+.+ .+. .+.
T Consensus 30 L~C~~~~~~~~~~~i~W~k--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~ 105 (112)
T 3so5_A 30 FTCSAASSSDSPMTFAWXX--DNEALQDAEM--ENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105 (112)
T ss_dssp EEEEEEESCCCCCEEEEEE--TTEECTTCEE--EEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEEEECC
T ss_pred EEEEEecCCCCCEEEEEcc--CCcccccccc--cceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCcEEEe
Confidence 579999553 8999998 3322211100 00011110000 001146899999999999999999954 333 345
Q ss_pred EEEEEE
Q psy3125 75 AIMLNV 80 (163)
Q Consensus 75 ~~~l~V 80 (163)
.+.|.|
T Consensus 106 ~~~l~V 111 (112)
T 3so5_A 106 XAXLTI 111 (112)
T ss_dssp CEEEEE
T ss_pred EEEEEe
Confidence 556655
No 452
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.88 E-value=9e-09 Score=64.45 Aligned_cols=49 Identities=29% Similarity=0.576 Sum_probs=36.8
Q ss_pred eEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCCCc----cEEEEEEEecC
Q psy3125 115 RFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKM----NMAIMLNVDGK 163 (163)
Q Consensus 115 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~----~~~~~L~V~~~ 163 (163)
||.+.........+|+|.+++.+|+|.|.|.+ +..+.. +..+.|.|.++
T Consensus 63 Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~ 116 (129)
T 3rrq_A 63 RFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKLQIKESLRAELRVTER 116 (129)
T ss_dssp CEEEEECTTSSEEEEEESSCCGGGCEEEEEEEEECGGGCEEEECCCEEEEEECC
T ss_pred cEEEEEcCCCCEEEEEECCCChhHCEEEEEEEEecCCCceeeEeceEEEEEecC
Confidence 55554334455788999999999999999999 655554 56688888754
No 453
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic, immune system; 1.70A {Homo sapiens}
Probab=98.88 E-value=7.8e-09 Score=65.61 Aligned_cols=83 Identities=14% Similarity=0.246 Sum_probs=52.9
Q ss_pred CceEEecC--C-CcEEEEEecCC---e-eEEec---ce-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---H-ILTTN---IY-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~-~~~~~---~~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. . ..|.|+|...+ . ++... .. .+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~ 99 (139)
T 2d7t_H 20 VSCKASGYTFTGNYMHWVRQAPGQGLEYMGWINPKSGDTNYAQKFQGRVTMTRDTSISTVYMEVRRLRSDDTAVYYCATG 99 (139)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEEEEeCCcccCCEEEEEEECCCCCCEEEEEEEcCCCceeeCcccCCeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEe
Confidence 67999864 2 78999997532 1 22211 11 111 246899886434568999999999999999999995
Q ss_pred CCCC--eeEEEEEEEEcC
Q psy3125 68 TEPK--MNMAIMLNVDDR 83 (163)
Q Consensus 68 ~~~~--~~~~~~l~V~~~ 83 (163)
.... ....+.|.|...
T Consensus 100 ~~~~~~fg~GT~L~V~~~ 117 (139)
T 2d7t_H 100 WWGMDVWGQGTLVTVSSA 117 (139)
T ss_dssp SSSCCEECCCEEEEECC-
T ss_pred eCCcCEECCCEEEEEecc
Confidence 4221 223445666544
No 454
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.88 E-value=8.8e-09 Score=64.31 Aligned_cols=68 Identities=18% Similarity=0.436 Sum_probs=46.5
Q ss_pred CceEEecC--C-CcEEEEEecCC---e-eEEecc---eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---H-ILTTNI---YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~-~~~~~~---~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. . ..|.|+|.... . ++.... .... ..+||.+..+...++++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~ 99 (127)
T 1kxt_B 20 LSCAASGYTFSSYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRDNAANTAYLQMDSLKPEDTAVYYCAAGP 99 (127)
T ss_dssp EEEEEC--CCSSSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEECSSSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEeEecCCCccceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEeCCCCEEEEEECcCCHHHCEEEEEEEEc
Confidence 67999853 3 78999996432 1 222111 1111 2469998865445789999999999999999999954
No 455
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=98.88 E-value=2.1e-08 Score=64.33 Aligned_cols=68 Identities=19% Similarity=0.459 Sum_probs=47.4
Q ss_pred CceEEecC--C-CcEEEEEecCC---e-eEEec---c-eEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGL--G-RPVSWMRKRDL---H-ILTTN---I-YTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~--~-~~v~W~k~~~~---~-~~~~~---~-~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+. . ..|.|+|+..+ . ++... . ... ...+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~ 99 (148)
T 1jtp_A 20 LSCAASGYTIGPYCMGWFRQAPGKEREGVAAINMGGGITYYADSVKGRFTISQDNAKNTVYLLMNSLEPEDTAIYYCAAD 99 (148)
T ss_dssp EEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEECCTTSEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEEeCccCCCCEEEEEEECCCCCcEEEEEEECCCCceeeCCccCCcEEEEEcCCCCEEEEEECcCChhHCEEEEEEEE
Confidence 57999864 3 78999997532 1 22211 1 111 1246999886544678999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (148)
T 1jtp_A 100 S 100 (148)
T ss_dssp C
T ss_pred c
Confidence 4
No 456
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.88 E-value=1.1e-08 Score=68.87 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=55.5
Q ss_pred CceEEecCC-CcEEEEEecCC----eeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC---CC--
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL----HILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT---EP-- 70 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~----~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~---~~-- 70 (163)
|.|.+.+.. ..|.|+|+..+ .++..........+||.+..+...+.++|.|.+++.+|+|.|.|.+.. ..
T Consensus 19 L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~ 98 (200)
T 2nw2_A 19 INCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSASYLCAVQASGGSYIP 98 (200)
T ss_dssp EEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEC---CCCCC
T ss_pred EEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCCcEEEEEEcCCcceee
Confidence 579988777 78999996532 222222111112689998765456789999999999999999999953 11
Q ss_pred CeeEEEEEEEEcC
Q psy3125 71 KMNMAIMLNVDDR 83 (163)
Q Consensus 71 ~~~~~~~l~V~~~ 83 (163)
.......|.|...
T Consensus 99 ~fg~gt~L~V~~~ 111 (200)
T 2nw2_A 99 TFGRGTSLIVHPY 111 (200)
T ss_dssp EECCCEEEEEECC
T ss_pred eeCCCEEEEEecC
Confidence 1123456777753
No 457
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.88 E-value=1.7e-09 Score=66.26 Aligned_cols=77 Identities=13% Similarity=0.261 Sum_probs=41.8
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEE--EEEcccCcCCCeeEEEEeeC-CCC-eeEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWN--MKIDYAQKRDAGIYECQVNT-EPK-MNMA 75 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~--L~i~~v~~~D~G~Y~C~~~~-~~~-~~~~ 75 (163)
|.|.+.|.| +.|.|+| ++..+..... ....+..... +..... |.|.+++.+|+|.|+|.+.+ .+. .+..
T Consensus 29 L~C~~~g~P~p~v~W~k--~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~s~~ 102 (117)
T 2v9t_A 29 LNCKAEGRPTPTIEWYK--GGERVETDKD--DPRSHRMLLP--SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHD 102 (117)
T ss_dssp ECCEEEEESCCEEEEEE--TTEECCCTTT--CSSCSEEECT--TSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEECCC
T ss_pred EEEECCccCCCeEEEEE--CCEeccccCC--CCcceeEEec--CCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceEeee
Confidence 689999999 9999998 3332221110 0011222221 112222 23337789999999999944 333 3445
Q ss_pred EEEEEEcC
Q psy3125 76 IMLNVDDR 83 (163)
Q Consensus 76 ~~l~V~~~ 83 (163)
+.|.|..+
T Consensus 103 ~~l~~~~~ 110 (117)
T 2v9t_A 103 ASLEVAAA 110 (117)
T ss_dssp EEEEEC--
T ss_pred EEEEhhhh
Confidence 55665543
No 458
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.88 E-value=3.7e-09 Score=73.48 Aligned_cols=85 Identities=20% Similarity=0.405 Sum_probs=51.3
Q ss_pred CceEE---ecCC-CcEEEEEecCCe-----eEEecceE----ecC----CCeEEEeccCCCCeEEEEEcccCcCCCeeEE
Q psy3125 1 MACTV---MGLG-RPVSWMRKRDLH-----ILTTNIYT----YTG----DARFSVIHPQNSDEWNMKIDYAQKRDAGIYE 63 (163)
Q Consensus 1 l~C~~---~~~~-~~v~W~k~~~~~-----~~~~~~~~----~~~----~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 63 (163)
|.|.+ .+.| +.|.|+|.+... ++.+.... ... ..|..+.......+.+|.|.+++.+|+|.|+
T Consensus 138 L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 217 (268)
T 3mj6_A 138 MRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYT 217 (268)
T ss_dssp ECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEE
Confidence 57999 5667 999999853321 11110000 001 1244443221234668999999999999999
Q ss_pred EEee-CCCCeeEEEEEEEEcCCC
Q psy3125 64 CQVN-TEPKMNMAIMLNVDDRGR 85 (163)
Q Consensus 64 C~~~-~~~~~~~~~~l~V~~~~~ 85 (163)
|.+. ..+.....+.|.|...++
T Consensus 218 C~a~n~~g~~~~~~~l~V~~~~p 240 (268)
T 3mj6_A 218 CSIYVGKLESRKTIVLHVVQDEF 240 (268)
T ss_dssp EEEEETTEEEEEEEEEEEECC--
T ss_pred EEEEcCCceEEEEEEEEEEcCCC
Confidence 9994 445566777788865543
No 459
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.88 E-value=4.7e-09 Score=64.43 Aligned_cols=68 Identities=21% Similarity=0.370 Sum_probs=47.2
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEec---ceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTN---IYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~---~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.+ ..|.|+|.... . ++... ...+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 99 (116)
T 1a2y_B 20 ITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARER 99 (116)
T ss_dssp EEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEES
T ss_pred EEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEec
Confidence 689998653 78999996532 1 22211 11111 1469988764345689999999999999999999954
No 460
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.88 E-value=5.6e-09 Score=68.85 Aligned_cols=56 Identities=29% Similarity=0.559 Sum_probs=41.1
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.| +.+.|+|.+.. +. ...+.|+.+.. +.+|.|.+++.+|+|.|+|.+.+
T Consensus 116 l~C~~~g~p~p~v~W~~~~~~-~~------~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n 172 (189)
T 2v44_A 116 VVCRVSSSPAPAVSWLYHNEE-VT------TISDNRFAMLA-----NNNLQILNINKSDEGIYRCEGRV 172 (189)
T ss_dssp ECCEEECSSCCEEEEEEEC---CE------ECCCTTEEECT-----TSCEEETTCCGGGCEEEEEEEEE
T ss_pred EEEEECcCCCCcEEEEECCcE-Ee------ccCCCCEEEec-----CCcEEEEEcCcccCeEEEEEEEc
Confidence 579999999 99999984321 11 11345666553 23699999999999999999944
No 461
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=98.88 E-value=5.3e-09 Score=63.97 Aligned_cols=68 Identities=18% Similarity=0.413 Sum_probs=46.4
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Eecc---eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TTNI---YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~~~---~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+.. ..|.|+|.... ..+ .... ..+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.+
T Consensus 20 L~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 99 (114)
T 1sjv_A 20 LSCAASGNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLEPEDTAVYYCYTHY 99 (114)
T ss_dssp EEECCCC-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCCGGGCSEEEEEECC
T ss_pred EEEEEcCccccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECCCCHHHCEEEEEeEEc
Confidence 579887642 78999996422 222 2111 1111 2479998865445689999999999999999999954
No 462
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.88 E-value=4.8e-09 Score=65.46 Aligned_cols=66 Identities=20% Similarity=0.420 Sum_probs=42.5
Q ss_pred CceEEecC-C-CcEEEEEecCC--eeEEecceEecCCCeEEEecc---CCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL--HILTTNIYTYTGDARFSVIHP---QNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~--~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + +.|.|+|.... .++..... ...+|+....+ .....++|.|.+++.+|+|.|.|.+.+
T Consensus 23 L~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~--~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 95 (127)
T 2jju_A 23 LRCAMTSLIPVGPIMWFRGAGAGRELIYNQKE--GHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFR 95 (127)
T ss_dssp ECCEESCCCSCCCEEEEECSSTTCEEEEESSS--SCCTTEEEC-------CCBCCEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEEeCCCCCCEEEEEecCCCCcEEEEECCC--CccCcEEeeEeeeecCCCEEEEEECCCCHHHCEEEEEEEEc
Confidence 68999876 5 89999995422 12221111 01246665321 123477899999999999999999954
No 463
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.87 E-value=3.2e-09 Score=65.49 Aligned_cols=66 Identities=21% Similarity=0.418 Sum_probs=42.6
Q ss_pred CceEEecC-C-CcEEEEEecCC--eeEEecceEecCCCeEEEecc---CCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL--HILTTNIYTYTGDARFSVIHP---QNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~--~~~~~~~~~~~~~~r~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|+|.+.+. + +.|.|+|.+.. .++...... ..+|+....+ ......+|.|.+++.+|+|.|.|.+..
T Consensus 27 L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~--~~~r~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 99 (120)
T 2yz1_A 27 LNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGE--HFPRVTNVSDATKRNNMDFSIRISNVTPEDAGTYYCVKFQ 99 (120)
T ss_dssp ECCEESCCCSCCCEEEEESSSTTCEEEEEECEE--CTTTCCSEEECCBSSTTBCCEEECSCCGGGCEEEEEEEEE
T ss_pred EEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCc--ccCcccceeeccccCCCeEEEEECCCCHHHCEEEEEEEEc
Confidence 68999876 5 89999996422 233221111 1234432211 123467899999999999999999954
No 464
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.87 E-value=1.1e-08 Score=70.77 Aligned_cols=69 Identities=16% Similarity=0.370 Sum_probs=47.6
Q ss_pred CceEEecCC---CcEEEEEecCCeeEEe-----cce-----EecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDLHILTT-----NIY-----TYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~~~~~~-----~~~-----~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ +.|.|+|.+....+.. ... .....+||.+.........+|.|.+++.+|+|.|+|.+.
T Consensus 154 L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 233 (256)
T 3ux9_B 154 LSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARY 233 (256)
T ss_dssp EEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 689999865 8999998643221110 000 011245888876544568899999999999999999996
Q ss_pred CC
Q psy3125 68 TE 69 (163)
Q Consensus 68 ~~ 69 (163)
+.
T Consensus 234 ~~ 235 (256)
T 3ux9_B 234 ID 235 (256)
T ss_dssp ET
T ss_pred cC
Confidence 53
No 465
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.87 E-value=4.9e-09 Score=72.72 Aligned_cols=82 Identities=13% Similarity=0.218 Sum_probs=53.1
Q ss_pred CceEEecCC-CcEEEEEecCCe---eEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH---ILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~---~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|.+.+.+ +.|.|+|..... .+....... ...+||.+.. .....+|.|.+++.+|+|.|+|.+.+.. ..
T Consensus 158 L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~f 235 (256)
T 3umt_A 158 ITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSR--SGSDYSLTISSLESEDFVDYYCLQYASSPPTF 235 (256)
T ss_dssp EEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEE--ETTEEEEEECSCCGGGCSEEEEEECSSSSCEE
T ss_pred EEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEec--CCCEEEEEECCCChhHCEEEEEEEeeCCCcEE
Confidence 689999988 899999853221 111111111 1246777764 3457889999999999999999995422 23
Q ss_pred eEEEEEEEEcCC
Q psy3125 73 NMAIMLNVDDRG 84 (163)
Q Consensus 73 ~~~~~l~V~~~~ 84 (163)
...+.|.|..++
T Consensus 236 g~gt~L~V~~~~ 247 (256)
T 3umt_A 236 GGGTKLEIKRAA 247 (256)
T ss_dssp CCCEEEEEC---
T ss_pred CCCEEEEEECCC
Confidence 455667777653
No 466
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.87 E-value=1.2e-08 Score=70.16 Aligned_cols=83 Identities=14% Similarity=0.217 Sum_probs=56.5
Q ss_pred CceEEecCC-CcEEEEEecCCe----eEEe-cceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH----ILTT-NIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~----~~~~-~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|.+.+.. ..|.|+|+..+. ++.. ........+||.+..+...+.++|.|.+++.+|+|.|.|.+.... ..
T Consensus 21 L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~ 100 (229)
T 2q86_A 21 LQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLDDTATYFCVVGDRGSALF 100 (229)
T ss_dssp EEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGGGCEEEEEEESCGGGCEE
T ss_pred EEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcccCccEEEEEEecCcccc
Confidence 579998777 789999975322 2221 111122357999876555678999999999999999999995422 12
Q ss_pred eEEEEEEEEcC
Q psy3125 73 NMAIMLNVDDR 83 (163)
Q Consensus 73 ~~~~~l~V~~~ 83 (163)
...+.|.|...
T Consensus 101 g~gt~L~V~~~ 111 (229)
T 2q86_A 101 GSGTQLIVIPY 111 (229)
T ss_dssp CCCEEEEEECC
T ss_pred cCCEEEEEECc
Confidence 23446777753
No 467
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.87 E-value=9.2e-09 Score=65.10 Aligned_cols=81 Identities=22% Similarity=0.391 Sum_probs=54.1
Q ss_pred CceEEe-cCC-CcEEEEEecCC---e-eEEe---cc-eEec--C-CCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVM-GLG-RPVSWMRKRDL---H-ILTT---NI-YTYT--G-DARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~-~~~-~~v~W~k~~~~---~-~~~~---~~-~~~~--~-~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+. +.. ..|.|+|+..+ . ++.. +. ..+. . .+||.+.. ..++++|.|.+++.+|+|.|.|.+.
T Consensus 19 L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~--~~~~~~L~I~~~~~~Dsg~Y~C~~~ 96 (137)
T 3bdb_A 19 MECSMSKVTNKNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV--NDQKFDLNIIGAREDDGGEYFCGEV 96 (137)
T ss_dssp CCCBCTTCCCGGGBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE--SSSBEEEEEESCCSTTCEEEEEEEE
T ss_pred EEeecCCCcCcceEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEe--cCCEEEEEECCCCHHHCEEEEEEEc
Confidence 689998 766 88999996432 1 2221 11 1121 1 57998875 3568899999999999999999995
Q ss_pred CCCC--eeEEEEEEEEcC
Q psy3125 68 TEPK--MNMAIMLNVDDR 83 (163)
Q Consensus 68 ~~~~--~~~~~~l~V~~~ 83 (163)
.... ....+.|.|...
T Consensus 97 ~~~~~~fg~GT~L~V~~~ 114 (137)
T 3bdb_A 97 EGIIIKFTSGTRLQFEGS 114 (137)
T ss_dssp CSSCEEEEEEEEECCCCC
T ss_pred cCCeEEECCCEEEEEECC
Confidence 4332 234455666554
No 468
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=98.87 E-value=1.1e-08 Score=62.62 Aligned_cols=66 Identities=21% Similarity=0.408 Sum_probs=46.4
Q ss_pred CceEEecC-C-CcEEEEEecCC---e-eEEecc---eEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGL-G-RPVSWMRKRDL---H-ILTTNI---YTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~-~-~~v~W~k~~~~---~-~~~~~~---~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+. + ..|.|+|.... . ++.... .... ..+||.+.. ..++++|.|.+++.+|+|.|.|.+..
T Consensus 21 L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 97 (115)
T 2otu_A 21 LTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS--SGADRYLSISNIQPEDEAIYICGVGD 97 (115)
T ss_dssp EEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEc--cCCEEEEEECCCChhHCEEEEEEEec
Confidence 68999876 5 88999996432 2 222111 1222 146888875 34678999999999999999999953
No 469
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.86 E-value=1.3e-08 Score=61.49 Aligned_cols=80 Identities=18% Similarity=0.290 Sum_probs=50.3
Q ss_pred EEcCCCceEeeCCCeEEEecCC--CCceeEEEEeCC--------------------CeEEEecCCCCceEEEEecccCcC
Q psy3125 80 VDDRGRGARLSAGPLLNFAFPD--LLTTNIYTYTGD--------------------ARFSVIHPQNSDEWNMKIDYAQKR 137 (163)
Q Consensus 80 V~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~L~i~~v~~~ 137 (163)
|...+....+..|..+.+.|.. .+...+.|++.. .|+.+.. ......|.|.+++.+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 81 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG--SGTDFTLTISSLEPE 81 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--SSSEEEEEECSCCTT
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe--cCCEEEEEECCCCHH
Confidence 3334445667778888888853 224567777642 2233221 224567999999999
Q ss_pred CCeeEEEEc-CCCC-CccEEEEEEEe
Q psy3125 138 DAGIYECQV-NTEP-KMNMAIMLNVD 161 (163)
Q Consensus 138 D~G~Y~C~a-~~~~-~~~~~~~L~V~ 161 (163)
|+|.|.|.| +... .......|.|+
T Consensus 82 DsG~Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 82 DFAMYICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp CCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred HCEEEEEEEccCCccEECCCEEEEEE
Confidence 999999999 5422 22345567665
No 470
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.86 E-value=7.4e-09 Score=71.61 Aligned_cols=140 Identities=9% Similarity=0.123 Sum_probs=75.4
Q ss_pred CceEEecC---C--CcEEEEEecCCeeEEecc---eEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC-
Q psy3125 1 MACTVMGL---G--RPVSWMRKRDLHILTTNI---YTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK- 71 (163)
Q Consensus 1 l~C~~~~~---~--~~v~W~k~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~- 71 (163)
|.|.+.+. | ..|.|+| ++..+.... .....+++|.+. ..|.|.....+|.|.|+|++.+...
T Consensus 44 L~C~v~g~~p~P~~i~v~W~k--~g~~l~~~~~~~~~~~~~g~~~~~-------s~L~i~~~~~~d~~~YtC~v~h~~~~ 114 (240)
T 4acp_A 44 VTCVVVDVSHEDPEVKFNWYV--DGVEVHNAKTKPREEQYNSTYRVV-------SVLTVLHQDWLNGKEYKCKVSNKALP 114 (240)
T ss_dssp EEEEEESCCC--CCCEEEEEE--TTEEECCCEECCCEEC---CEEEE-------EEEECCHHHHHHTCCEEEEEECC---
T ss_pred EEEEEeccccCCCccEEEEEE--CCcccCCceeccceECCCCeEEEE-------EEEEEechhccCCCEEEEEEEcCCCC
Confidence 57999985 4 4799998 333221110 011224455443 3588888888899999999965332
Q ss_pred --eeEEEEEEEE-cCCCceEee-------CCCeEEEecCCC---C-ceeEEEEeCCCeEEE---e---cCCCC---ceEE
Q psy3125 72 --MNMAIMLNVD-DRGRGARLS-------AGPLLNFAFPDL---L-TTNIYTYTGDARFSV---I---HPQNS---DEWN 128 (163)
Q Consensus 72 --~~~~~~l~V~-~~~~~~~v~-------~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~---~---~~~~~---~~~~ 128 (163)
....+.+.+. ..++.+.+. .+..+.+.|... + ...+.|++++..... . ....+ ....
T Consensus 115 ~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~ 194 (240)
T 4acp_A 115 APIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSK 194 (240)
T ss_dssp -CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEE
T ss_pred ccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEE
Confidence 2222221110 011112211 256677888532 2 246889887754210 0 00111 1345
Q ss_pred EEecccCcCCCeeEEEEc-CCC
Q psy3125 129 MKIDYAQKRDAGIYECQV-NTE 149 (163)
Q Consensus 129 L~i~~v~~~D~G~Y~C~a-~~~ 149 (163)
|.|......|.|.|+|+| +..
T Consensus 195 L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 195 LTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEEHHHHHTTCCEEEEEECTT
T ss_pred EEEChHHhCCCCEEEEEEEECC
Confidence 778777778899999999 443
No 471
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.86 E-value=6.8e-09 Score=62.18 Aligned_cols=75 Identities=16% Similarity=0.115 Sum_probs=53.1
Q ss_pred CCceEeeCCCeEEEecCCC-CceeEEEEeCCCeE--------EEecCCCCceEEEEecccCcCCCeeEEEEcCCCCCccE
Q psy3125 84 GRGARLSAGPLLNFAFPDL-LTTNIYTYTGDARF--------SVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNM 154 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~~~ 154 (163)
+....+..|..+.+.|... +...+.|++++..+ .+.. ......|.|.+++.+|+|.|+|.|.+ .+.
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n---~~~ 88 (103)
T 1x44_A 14 LEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRV--EGKKHILIIEGATKADAAEYSVMTTG---GQS 88 (103)
T ss_dssp CCCEEEETTEEEEEEEECSSSSCCCEEEETTEECCCSTTCSEEEEE--ETTEEEEEEEEECTTTCSEEEEEETT---EEE
T ss_pred CCCEEEECCCCEEEEEEecCCCCeEEEEECCEECCCCCceEEEEEE--cCCEEEEEECCCCcccCEEEEEEECC---CcE
Confidence 3345677888899998642 44678898876432 2221 12346799999999999999999932 577
Q ss_pred EEEEEEecC
Q psy3125 155 AIMLNVDGK 163 (163)
Q Consensus 155 ~~~L~V~~~ 163 (163)
.+.|.|.++
T Consensus 89 ~~~l~V~~~ 97 (103)
T 1x44_A 89 SAKLSVDLK 97 (103)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEeCC
Confidence 888888753
No 472
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.86 E-value=2.4e-09 Score=71.67 Aligned_cols=70 Identities=19% Similarity=0.297 Sum_probs=48.2
Q ss_pred CceEE-ecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEE
Q psy3125 1 MACTV-MGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIM 77 (163)
Q Consensus 1 l~C~~-~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~ 77 (163)
|.|.+ .+.| +.|.|+|.++...+.. .+.. ...+.+|.|.+++.+|+|.|+|.+ +..+..+..+.
T Consensus 141 l~C~~~~g~p~~~v~W~~~~~~~~~~~--------~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 207 (214)
T 3jz7_A 141 LKCEPKEGSLPLQFEWQKLSDSQTMPT--------PWLA-----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLR 207 (214)
T ss_dssp EEEECSBCCSSCEEEEEECSTTCCCCG--------GGGG-----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEecCCCCCCCCEEEEEECCCCCccCc--------ccee-----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEE
Confidence 57999 7888 9999998533322211 1100 112447999999999999999999 44556677777
Q ss_pred EEEEcC
Q psy3125 78 LNVDDR 83 (163)
Q Consensus 78 l~V~~~ 83 (163)
|.|.++
T Consensus 208 l~V~~P 213 (214)
T 3jz7_A 208 LDVVPP 213 (214)
T ss_dssp ECCBCC
T ss_pred EEEeCC
Confidence 777643
No 473
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=98.86 E-value=1.6e-08 Score=68.38 Aligned_cols=81 Identities=16% Similarity=0.299 Sum_probs=55.2
Q ss_pred CceEEec-CC-CcEEEEEecCC---e-eEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC-----
Q psy3125 1 MACTVMG-LG-RPVSWMRKRDL---H-ILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE----- 69 (163)
Q Consensus 1 l~C~~~~-~~-~~v~W~k~~~~---~-~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~----- 69 (163)
|.|.+.+ .. ..|.|+|+..+ . ++...... ...+||.+..+...++++|.|.+++.+|+|.|.|.+...
T Consensus 19 L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~-~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~~~~~~~~ 97 (206)
T 1kgc_D 19 LPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSN-VNNRMASLAIAEDRKSSTLILHRATLRDAAVYYCILPLAGGTSY 97 (206)
T ss_dssp EEEEESCCCTTCCEEEEEECTTSCCEEEEEESSSS-EECSSEEEEECTTSSEEEEEESSCCGGGCEEEEEECCCCSTTCC
T ss_pred EEEEEcCCCCCccEEEEEECCCCCcEEEEEECCCC-ccCCCEEEEEcCCCCEEEEEECCCCcccCccEEEEEecccCCCc
Confidence 5799987 44 78999997532 2 22221111 126899988655567899999999999999999999542
Q ss_pred C--CeeEEEEEEEEc
Q psy3125 70 P--KMNMAIMLNVDD 82 (163)
Q Consensus 70 ~--~~~~~~~l~V~~ 82 (163)
. .....+.|.|..
T Consensus 98 ~~~~~g~gt~L~V~~ 112 (206)
T 1kgc_D 98 GKLTFGQGTILTVHP 112 (206)
T ss_dssp CCCCCCCCEEEEEEC
T ss_pred ccceECCCEEEEEeC
Confidence 1 122345777765
No 474
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=98.86 E-value=9.7e-09 Score=63.88 Aligned_cols=68 Identities=21% Similarity=0.493 Sum_probs=47.3
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Eec---ceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TTN---IYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~~---~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ ..|.|+|.... ..+ ... ...+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~ 99 (124)
T 1yc7_A 20 LSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQREDTGMYYCQIQC 99 (124)
T ss_dssp EEEEEESCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEEeCCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 689998643 67999996532 122 111 11111 2469998865445689999999999999999999954
No 475
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.86 E-value=4.3e-09 Score=76.84 Aligned_cols=84 Identities=14% Similarity=0.227 Sum_probs=51.7
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~~~~~~~l 78 (163)
|.|.+.+ | +.|.|+|.+ +.++... ..+.|+.+ . +.+|.|.+++.+|+|.|+|.+. ..+..+..+.|
T Consensus 266 l~C~~~g-p~p~i~W~~~~-~~~~~~~----~~~~r~~~-~-----~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 333 (361)
T 2xot_A 266 IRCDTKQ-QGMTKVWVSPS-NEQVLSQ----GSNGSVSV-R-----NGDLFFKKVQVEDGGVYTCYAMGETFNETLSVEL 333 (361)
T ss_dssp ECCCCSS-TTCEEEEECTT-SCBCCSC----CSSSSEEE-E-----TTEEEESSCCTTSCEEEEEEEECSSCEEEEEEEE
T ss_pred EEeEeeC-CCCeEEEEeCC-CeeEeec----ccCCceEe-e-----cCeEEEeecCcccCEEEEEEEecCCCccEEEEEE
Confidence 5799999 7 999999733 2222111 12347776 2 3469999999999999999994 45566777788
Q ss_pred EEEcCCCceEeeCCCeEEEecCC
Q psy3125 79 NVDDRGRGARLSAGPLLNFAFPD 101 (163)
Q Consensus 79 ~V~~~~~~~~v~~~~~~~~~~~~ 101 (163)
.|...+ ..|..+.+.|..
T Consensus 334 ~V~~~~-----~~g~~~~l~C~~ 351 (361)
T 2xot_A 334 KVYNFT-----LHGHHDTLNAAA 351 (361)
T ss_dssp EEESSC-----CC----------
T ss_pred EEEeee-----ccCCceEEEEEe
Confidence 886542 445566777754
No 476
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.86 E-value=6.2e-09 Score=68.52 Aligned_cols=63 Identities=14% Similarity=0.130 Sum_probs=47.5
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.+.|+|.+ ..+ . . ...+|.|.+++.+|+|.|+|.+ +.....+..+.|
T Consensus 117 l~C~~~~~p~~~v~W~~~~-~~~--------------~-~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l 175 (184)
T 2ny1_B 117 LTLESPPGSSPSVQCRSPR-GKN--------------I-Q-----GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDI 175 (184)
T ss_dssp EEEECCTTCCCEEEEECTT-SCE--------------E-E-----ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEeCC-Ccc--------------c-c-----CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEE
Confidence 579999989 999999722 111 1 1 1356999999999999999999 445566777888
Q ss_pred EEEcCC
Q psy3125 79 NVDDRG 84 (163)
Q Consensus 79 ~V~~~~ 84 (163)
.|...+
T Consensus 176 ~V~~~p 181 (184)
T 2ny1_B 176 VVLAFQ 181 (184)
T ss_dssp EEECCC
T ss_pred EEEecC
Confidence 887764
No 477
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=98.86 E-value=2.4e-08 Score=61.80 Aligned_cols=68 Identities=10% Similarity=0.268 Sum_probs=45.7
Q ss_pred CceEEecCCCcEEEEEecCC---eeEE-ecce--Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC
Q psy3125 1 MACTVMGLGRPVSWMRKRDL---HILT-TNIY--TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE 69 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~~~~---~~~~-~~~~--~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 69 (163)
|.|........|.|+|.... .++. .... ... ..+||.+.. ...+.++|.|.+++.+|+|.|.|.+...
T Consensus 21 L~C~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~-~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 21 LSCNQTNNHNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASR-PSQENFSLTLESATPSQTSVYFCASGGG 96 (121)
T ss_dssp EEEEESSCCSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEEC-CSSSEEEEEESSCCGGGCEEEEEEEESS
T ss_pred EEEEecCCCCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEc-CCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 57986432388999996432 2222 2111 111 256888875 3445799999999999999999999543
No 478
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.85 E-value=1.1e-08 Score=64.40 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=50.6
Q ss_pred CCceEeeCCCeEEEecCCCCceeEEEEeCC------------CeEEEecCCCCceEEEEecccCcCCCeeEEEEc-CCCC
Q psy3125 84 GRGARLSAGPLLNFAFPDLLTTNIYTYTGD------------ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEP 150 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~ 150 (163)
+....+..|..+.+.|.......+.|++.. .|+.+.. ......|.|.+++.+|+|.|+|.+ |..+
T Consensus 24 p~~~~v~~G~~v~L~C~~~~~~~v~W~r~~~g~~~~~l~~~~~r~~~~~--~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 24 PRFAAKKRSSMVKFHCYTNHSGALTWFRKRGSQQPQELVSEEGRIVQTQ--NGSVYTLTIQNIQYEDNGIYFCKQKCDSA 101 (133)
T ss_dssp CSEEEECTTCCEEEEEEESSSSCEEEEEECTTSCCEECCCTTTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred CceEEEeCCCeEEEEEEeCCCCEEEEEEeCCCCCCEEEEEeCCCEEEEc--CCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 445566777778888864322667777652 3444433 134677999999999999999999 6544
Q ss_pred ----CccEEEEEEEec
Q psy3125 151 ----KMNMAIMLNVDG 162 (163)
Q Consensus 151 ----~~~~~~~L~V~~ 162 (163)
.....+.|.|.+
T Consensus 102 ~~~~~~g~gt~L~V~~ 117 (133)
T 3khq_A 102 NHNVTDSCGTELLVLG 117 (133)
T ss_dssp ------CCCEEEEEC-
T ss_pred CcceeECCCEEEEEEe
Confidence 235567788765
No 479
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.85 E-value=7.9e-09 Score=64.22 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=46.1
Q ss_pred CceEEecCC---CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT 68 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~ 68 (163)
|.|.+.+.+ ..|.|+|+..+ .++........ ..+||.+.. ..+.++|.|.+++.+|+|.|.|.+..
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~--~~~~~sL~I~~l~~~DsG~Y~C~~~~ 93 (123)
T 3t0v_A 20 IFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSK--SGTSASLAISGLRSEDEADYYCLSWD 93 (123)
T ss_dssp EEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEc--cCCEEEEEECCCCHHHCEEEEEEEEc
Confidence 579998764 78999996422 22222211111 246888764 35689999999999999999999954
No 480
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.85 E-value=3.8e-09 Score=65.80 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=51.8
Q ss_pred CeEEEecC--CCCceeEEEEeCCCeEEEe--------c---CCCCceEEEEecccCcCCCeeEEEEc-CCCCCccEEEEE
Q psy3125 93 PLLNFAFP--DLLTTNIYTYTGDARFSVI--------H---PQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 158 (163)
Q Consensus 93 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~L~i~~v~~~D~G~Y~C~a-~~~~~~~~~~~L 158 (163)
..+.+.|. ..+.+.+.|++++..+... . ......+.|.|.++...|+|.|+|.| |..|..+..+.|
T Consensus 16 ~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l 95 (126)
T 1he7_A 16 HHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 95 (126)
T ss_dssp CEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEE
Confidence 34556664 5677899999887533211 1 01123567999999999999999999 999999999999
Q ss_pred EEec
Q psy3125 159 NVDG 162 (163)
Q Consensus 159 ~V~~ 162 (163)
.|..
T Consensus 96 ~v~~ 99 (126)
T 1he7_A 96 AFMD 99 (126)
T ss_dssp CCCS
T ss_pred EEEc
Confidence 8764
No 481
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.84 E-value=3.3e-07 Score=72.62 Aligned_cols=135 Identities=14% Similarity=0.136 Sum_probs=77.5
Q ss_pred CceEEecCC-CcEE-EEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee-CCCC-eeEEE
Q psy3125 1 MACTVMGLG-RPVS-WMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN-TEPK-MNMAI 76 (163)
Q Consensus 1 l~C~~~~~~-~~v~-W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~-~~~~-~~~~~ 76 (163)
|.|.+.|.| +.|. |++..++..+...... .+.. .....+|.|.+++.+|+|.|+|.+. ..+. .+..+
T Consensus 184 l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~-------~~~~--~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~ 254 (731)
T 2v5y_A 184 FQCSAIGRTVAGDRLWLQGIDVRDAPLKEIK-------VTSS--RRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYA 254 (731)
T ss_dssp EEEEEESCCCTTCEEEEEESSSCCEEEEEEE-------ECCS--SEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCE
T ss_pred EEEEeCCCCCCceeEEEecCCCccccccceE-------Eecc--ccceEEEEEcccccccCeEEEEEEECCCCCcceeeE
Confidence 689999999 8888 7752233333222111 1111 1124679999999999999999994 4444 55667
Q ss_pred EEEEEcCCCc-----eEeeCCCeEEEecCCCCc--------eeEEEEeCCCeEEEecCCCCceEEEEecccCcCCCeeEE
Q psy3125 77 MLNVDDRGRG-----ARLSAGPLLNFAFPDLLT--------TNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYE 143 (163)
Q Consensus 77 ~l~V~~~~~~-----~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 143 (163)
.|.|..++.. ........+.+.|..... -.+.+...+..+..... .....+.|.++.+.+...|+
T Consensus 255 ~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~ 332 (731)
T 2v5y_A 255 ELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQP--VDSTSYKIGHLDPDTEYEIS 332 (731)
T ss_dssp EEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEEEE--CCSSEEEECSCCTTCEEEEE
T ss_pred EEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEEec--cCcceEEEeCCCCCCEEEEE
Confidence 7888876432 122233445555543211 02223222222221111 11245899999998888888
Q ss_pred EEc
Q psy3125 144 CQV 146 (163)
Q Consensus 144 C~a 146 (163)
|.|
T Consensus 333 V~A 335 (731)
T 2v5y_A 333 VLL 335 (731)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 482
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.84 E-value=2.5e-08 Score=62.08 Aligned_cols=82 Identities=22% Similarity=0.360 Sum_probs=53.3
Q ss_pred CceEEecCC-----CcEEEEEecC---CeeEEecceEe--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC
Q psy3125 1 MACTVMGLG-----RPVSWMRKRD---LHILTTNIYTY--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP 70 (163)
Q Consensus 1 l~C~~~~~~-----~~v~W~k~~~---~~~~~~~~~~~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 70 (163)
|+|.+.+.+ ..|.|+|... ...+....... ...+||.+.. ..+.++|.|.+++.+|+|.|.|.+.+..
T Consensus 21 L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 98 (126)
T 4ffy_L 21 ISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSG--SETDFTLTIDSVETDDAATYYCQQNNED 98 (126)
T ss_dssp EEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec--CCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 679998764 6799999642 22222111111 1246888774 3468999999999999999999995432
Q ss_pred --CeeEEEEEEEEcCC
Q psy3125 71 --KMNMAIMLNVDDRG 84 (163)
Q Consensus 71 --~~~~~~~l~V~~~~ 84 (163)
.....+.|.|...+
T Consensus 99 ~~~fg~gT~L~V~~~g 114 (126)
T 4ffy_L 99 PYTFGGGTKLEIKGGG 114 (126)
T ss_dssp SCEECCCEEEEEEC--
T ss_pred CcEECCCEEEEEecCC
Confidence 23345677777653
No 483
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.84 E-value=7.6e-09 Score=69.61 Aligned_cols=70 Identities=23% Similarity=0.449 Sum_probs=48.6
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCCeeE-EEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPKMNM-AIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~~~~-~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+. ....++.+.. .+|.|.+++.+|+|.|+|.+.+ .+.... .+.
T Consensus 130 l~C~~~g~p~p~i~W~~--~~~~~~------~~~~~~~~~~------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~ 195 (212)
T 2yd1_A 130 MTCKAIGNPTPNIYWIK--NQTKVD------MSNPRYSLKD------GFLQIENSREEDQGKYECVAENSMGTEHSKATN 195 (212)
T ss_dssp ECCEEECSSCCEEEEEE--TTEECC------TTSTTEEEET------TEEEECSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEeccCCCCeEEEEE--CCeEcc------cCCCeEEccC------CeEEEccCChhhCEEEEEEeecCCCceeEEEEE
Confidence 579999999 9999998 332221 1234554432 2799999999999999999944 444433 478
Q ss_pred EEEEcCC
Q psy3125 78 LNVDDRG 84 (163)
Q Consensus 78 l~V~~~~ 84 (163)
|.|....
T Consensus 196 l~V~~~~ 202 (212)
T 2yd1_A 196 LYVKVRR 202 (212)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 8888663
No 484
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.84 E-value=7.9e-09 Score=63.79 Aligned_cols=81 Identities=20% Similarity=0.213 Sum_probs=51.5
Q ss_pred CceEEecCC----CcEEEEEecCC---eeEEecceEec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCCC
Q psy3125 1 MACTVMGLG----RPVSWMRKRDL---HILTTNIYTYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK 71 (163)
Q Consensus 1 l~C~~~~~~----~~v~W~k~~~~---~~~~~~~~~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~ 71 (163)
|.|.+.+.+ ..|.|+|...+ ..+........ ..+||.+.. ..+.++|.|.+++.+|+|.|.|.+.....
T Consensus 20 L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~~~~~DsG~Y~C~~~~~~~ 97 (120)
T 1oaq_L 20 LTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL--IGNKAALTITGAQTEDEAIYFCALWYSNH 97 (120)
T ss_dssp EEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEE--ETTEEEEEEESCCGGGCEEEEEEEEETTE
T ss_pred EEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEec--CCCeEEEEECCCChhhCeEEEEEEccCCC
Confidence 579988653 78999996432 12221111111 246888775 34688999999999999999999954321
Q ss_pred --eeEEEEEEEEcC
Q psy3125 72 --MNMAIMLNVDDR 83 (163)
Q Consensus 72 --~~~~~~l~V~~~ 83 (163)
....+.|.|...
T Consensus 98 ~~fg~gt~L~V~~~ 111 (120)
T 1oaq_L 98 LVFGGGTKLTVLGQ 111 (120)
T ss_dssp EEECCCEEEEECC-
T ss_pred cEECCCEEEEEcCC
Confidence 223345666543
No 485
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.84 E-value=7.1e-09 Score=68.77 Aligned_cols=66 Identities=24% Similarity=0.399 Sum_probs=47.0
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeEEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNMAIML 78 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~~~~l 78 (163)
|.|.+.+.| +.|.|+|. ...+. .. ..+.. .+.+|.|.+++.+|+|.|+|.+ +..+.....+.|
T Consensus 133 l~C~~~g~p~p~v~W~~~--~~~~~-------~~--~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 197 (201)
T 3s97_C 133 LECFALGNPVPDIRWRKV--LEPMP-------ST--AEIST----SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197 (201)
T ss_dssp EEEEEEEESCCEEEEEET--TBCCC-------TT--CEEET----TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCCCceEEEeC--CCcCC-------Cc--eeecC----CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEE
Confidence 579999999 99999982 22221 11 22222 2347999999999999999999 445666677777
Q ss_pred EEE
Q psy3125 79 NVD 81 (163)
Q Consensus 79 ~V~ 81 (163)
.|.
T Consensus 198 ~V~ 200 (201)
T 3s97_C 198 YVQ 200 (201)
T ss_dssp EEE
T ss_pred EEe
Confidence 775
No 486
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=98.84 E-value=6e-09 Score=64.62 Aligned_cols=68 Identities=19% Similarity=0.404 Sum_probs=46.4
Q ss_pred CceEEecCC---CcEEEEEecCC---e-eEEec---ce-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---H-ILTTN---IY-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~-~~~~~---~~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.+ ..|.|+|.... . ++... .. ... ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 99 (123)
T 2wzp_D 20 LSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLKPEDTAIYYCAAR 99 (123)
T ss_dssp EEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 689998643 67999996432 1 22211 11 111 246999886544457899999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (123)
T 2wzp_D 100 S 100 (123)
T ss_dssp E
T ss_pred c
Confidence 3
No 487
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.84 E-value=1.9e-08 Score=59.83 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=53.2
Q ss_pred eEeeCCCeEEEecCC-CCceeEEEEeCCCeE------EEecCCCCceEEEEecccCcCCCeeEEEEcCCCCCccEEEEEE
Q psy3125 87 ARLSAGPLLNFAFPD-LLTTNIYTYTGDARF------SVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIMLN 159 (163)
Q Consensus 87 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~~~~~~L~ 159 (163)
..+..|..+.+.|.. .+.+.+.|++++..+ .+.. ......|.|.+++.+|+|.|+|.| +..+..+.|.
T Consensus 18 ~~v~~G~~v~l~C~~~~p~~~v~W~k~g~~i~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a---g~~~~~~~l~ 92 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELADPKLEVKWYKNGQEIRPSTKYIFEH--KGCQRILFINNCQMTDDSEYYVTA---GDEKCSTELF 92 (100)
T ss_dssp EEECTTEEEEEEEEESCTTSCEEEEESSCBCCCBTTEEEEE--ETTEEEEEEEEECTTTCCEEEEEE---TTEEEEEEEE
T ss_pred cEEcCCCcEEEEEEecCCCceEEEEECCEECCCCCCEEEEe--cCCEEEEEEcCCCcCcCEEEEEEE---CCceEEEEEE
Confidence 456778888898863 355688999886533 3322 133457999999999999999999 6677888898
Q ss_pred Eec
Q psy3125 160 VDG 162 (163)
Q Consensus 160 V~~ 162 (163)
|..
T Consensus 93 V~~ 95 (100)
T 2yuv_A 93 VRS 95 (100)
T ss_dssp ECC
T ss_pred Eec
Confidence 875
No 488
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.83 E-value=2.8e-08 Score=62.68 Aligned_cols=79 Identities=22% Similarity=0.236 Sum_probs=52.3
Q ss_pred CceEEecCCCcEEEEEe-cCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC--CC--eeEE
Q psy3125 1 MACTVMGLGRPVSWMRK-RDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE--PK--MNMA 75 (163)
Q Consensus 1 l~C~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~--~~--~~~~ 75 (163)
|.|.+.+....|.|+|+ ..+..+.. .+...+||.... ..+.++|.|.+++.+|+|.|.|.+... .. ....
T Consensus 38 L~C~~s~~~~~v~Wyrq~~~g~~~~~---l~~~~~rf~~~~--~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~fg~G 112 (134)
T 3kg5_A 38 MHCYMNSASGNVSWLWKQEMDENPQQ---LKLEKGRMEESQ--NESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCG 112 (134)
T ss_dssp EEEECCCTTCCCEEEEESSSSSCCEE---CCCCTTTEEEEE--CSSEEEEEECSCCTTTCEEEEEEEECTTTCCEEECCC
T ss_pred EEEEECCCCceEEEEEECCCCCCcEE---EEEECCeEEEEc--cCCEEEEEECCCCcCcCEEEEEEEEcCCCCceEECCC
Confidence 57988775588999997 32211100 001357888775 346899999999999999999999543 11 2344
Q ss_pred EEEEEEcCC
Q psy3125 76 IMLNVDDRG 84 (163)
Q Consensus 76 ~~l~V~~~~ 84 (163)
+.|.|...+
T Consensus 113 T~L~V~~~p 121 (134)
T 3kg5_A 113 TELRVMGFS 121 (134)
T ss_dssp EEEEEECC-
T ss_pred EEEEEecCC
Confidence 567776554
No 489
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.83 E-value=1.6e-08 Score=68.45 Aligned_cols=83 Identities=16% Similarity=0.253 Sum_probs=55.6
Q ss_pred CceEEecCC-CcEEEEEecCC---e-eEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC------
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---H-ILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE------ 69 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~-~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~------ 69 (163)
|.|.+.+.. ..+.|+|+..+ . ++..........+||.+..+...+.++|.|.+++.+|+|.|.|.+...
T Consensus 22 L~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~DsG~Y~Ca~~~~~~~~~~ 101 (208)
T 4ei6_A 22 LNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSDSALYFCAASEQNNYAQG 101 (208)
T ss_dssp CEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGGCEEEEEEEEECCSSCCC
T ss_pred EEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccCCCcEEEEEecCCCcccc
Confidence 689999877 88999996432 2 222211111145799987655567899999999999999999998431
Q ss_pred CCeeEEEEEEEEcC
Q psy3125 70 PKMNMAIMLNVDDR 83 (163)
Q Consensus 70 ~~~~~~~~l~V~~~ 83 (163)
......+.|.|...
T Consensus 102 ~~fG~GT~L~V~~~ 115 (208)
T 4ei6_A 102 LTFGLGTRVSVFPY 115 (208)
T ss_dssp CEECCCEEEEEECC
T ss_pred ccCCCCEEEEEeCc
Confidence 12234457777763
No 490
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.83 E-value=2.1e-08 Score=59.14 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=53.4
Q ss_pred CCceEeeCCCeEEEecCC-CCceeEEEEeCCCeEEEecC----CCCceEEEEecccCcCCCeeEEEEcCCCCCccEEEEE
Q psy3125 84 GRGARLSAGPLLNFAFPD-LLTTNIYTYTGDARFSVIHP----QNSDEWNMKIDYAQKRDAGIYECQVNTEPKMNMAIML 158 (163)
Q Consensus 84 ~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~~~~~~~L 158 (163)
+....+..|..+.+.|.. .+...+.|++++..+..... .......|.|.+++.+|+|.|+|.| +..+..+.|
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a---g~~~~~~~l 91 (95)
T 2k1m_A 15 PRSVEVAAGSPAVFEAETERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA---GSSKVKFDL 91 (95)
T ss_dssp CCCEEEETTSCEEEEEECSSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE---TTEEEEEEE
T ss_pred CCcEEEeCCCcEEEEEEeCCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---CCceEEEEE
Confidence 345667788889999975 33457889987664321110 1123467999999999999999999 556777888
Q ss_pred EEe
Q psy3125 159 NVD 161 (163)
Q Consensus 159 ~V~ 161 (163)
.|.
T Consensus 92 ~V~ 94 (95)
T 2k1m_A 92 KVI 94 (95)
T ss_dssp EEE
T ss_pred EEe
Confidence 885
No 491
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=98.83 E-value=1.2e-08 Score=63.68 Aligned_cols=68 Identities=18% Similarity=0.444 Sum_probs=47.0
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Eecc---e-Eec--CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TTNI---Y-TYT--GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~~~---~-~~~--~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..|.|+|.... ..+ .... . .+. ..+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 20 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~ 99 (127)
T 1mqk_H 20 LSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCVRH 99 (127)
T ss_dssp EEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEEeCCCccCCcEEEEEEECCCCCCEEEEEEecCCCcEEcCcccCCCEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 689998643 78999997532 122 1111 1 111 246999886434568999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 100 ~ 100 (127)
T 1mqk_H 100 E 100 (127)
T ss_dssp E
T ss_pred c
Confidence 4
No 492
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.83 E-value=8.1e-09 Score=69.53 Aligned_cols=75 Identities=20% Similarity=0.430 Sum_probs=50.3
Q ss_pred CceEEecCC-CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeC-CCC-eeEEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNT-EPK-MNMAIM 77 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~-~~~-~~~~~~ 77 (163)
|.|.+.+.| +.|.|+| ++..+... ....|+..... ....+|.|.+++.+|+|.|+|.+.+ .+. .+..+.
T Consensus 128 l~C~~~g~p~p~v~W~~--~g~~l~~~----~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~ 199 (212)
T 2yd6_A 128 MLCAASGNPDPEITWFK--DFLPVDTS----NNNGRIKQLRS--ESIGALQIEQSEESDQGKYECVATNSAGTRYSAPAN 199 (212)
T ss_dssp EEEEEECSSCCEEEEEE--TTEEC----------CCEEEEEE--TTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEecCCCCCeEEEEE--CCccccCc----CCCceEEEEec--CCeEEEEEcCCCcccCEEEEEEEECCCCcccccccc
Confidence 579999999 9999998 33332211 01345555432 3467899999999999999999944 443 345667
Q ss_pred EEEEcC
Q psy3125 78 LNVDDR 83 (163)
Q Consensus 78 l~V~~~ 83 (163)
|.|...
T Consensus 200 l~~~~~ 205 (212)
T 2yd6_A 200 LYVRGT 205 (212)
T ss_dssp EEEEC-
T ss_pred EEEEec
Confidence 777655
No 493
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=98.83 E-value=2e-08 Score=61.53 Aligned_cols=68 Identities=16% Similarity=0.371 Sum_probs=47.6
Q ss_pred CceEEecCC---CcEEEEEecCC---eeE-Ee-cce--E-e--cCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG---RPVSWMRKRDL---HIL-TT-NIY--T-Y--TGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~---~~v~W~k~~~~---~~~-~~-~~~--~-~--~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|.|.+.+.. ..+.|+|+... ..+ .. ... . . ...+||.+..+...+.++|.|.+++.+|+|.|.|.+.
T Consensus 18 L~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~Y~C~~~ 97 (115)
T 3k74_B 18 LSCAASGFTFNNYWMYWVRRAPGKGLEWVSMINPGGIITKYAESVKGRFTISRDNAKNTLYLQMNSLTSEDTAVYYCAKD 97 (115)
T ss_dssp EEEEECSSCGGGSCEEEEEECTTCCEEEEEEECTTSCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEES
T ss_pred EEEEEeCccccCCEEEEEEECCCCCeEEEEEEECCCCceeecccccccEEEEEcCCCCEEEEEECCCChHhCEEEEEEEE
Confidence 579998653 68999996432 222 21 111 1 1 1247999887555578999999999999999999995
Q ss_pred C
Q psy3125 68 T 68 (163)
Q Consensus 68 ~ 68 (163)
.
T Consensus 98 ~ 98 (115)
T 3k74_B 98 W 98 (115)
T ss_dssp T
T ss_pred c
Confidence 4
No 494
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.83 E-value=1.4e-08 Score=69.93 Aligned_cols=79 Identities=15% Similarity=0.267 Sum_probs=52.2
Q ss_pred CceEEecCC-CcEEEEEecCCe-e--EEec-ceE-ecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCCC--Ce
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH-I--LTTN-IYT-YTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEP--KM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~-~--~~~~-~~~-~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~--~~ 72 (163)
|.|.+.+.+ +.|.|+|.+++. + +... ... .....||.+.. .....+|.|.+++.+|+|.|+|.+.+.. ..
T Consensus 155 L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~ 232 (247)
T 2ghw_B 155 LSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSG--SGTDFTLTISRLEPEDFAVYYCQQRSNWPPTF 232 (247)
T ss_dssp EEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEC--SSSEEEEEECSCCGGGCEEEEEEECSSSSCEE
T ss_pred EEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEec--CCCeEEEEECcCCHHHCEEEEEEEccCCCceE
Confidence 689999999 999999853222 1 1111 111 11246887764 3457889999999999999999995432 23
Q ss_pred eEEEEEEEE
Q psy3125 73 NMAIMLNVD 81 (163)
Q Consensus 73 ~~~~~l~V~ 81 (163)
...+.|.|.
T Consensus 233 g~~t~l~V~ 241 (247)
T 2ghw_B 233 GQGTKVEVK 241 (247)
T ss_dssp CCCEEEEEC
T ss_pred cCCEEEEEC
Confidence 345556664
No 495
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=5.8e-09 Score=62.25 Aligned_cols=76 Identities=12% Similarity=0.091 Sum_probs=52.3
Q ss_pred CCCceEeeCCCeEEEecCCC-CceeEEEEeCCCeE----------EEecCCCCceEEEEecccCcCCCeeEEEEcCCCCC
Q psy3125 83 RGRGARLSAGPLLNFAFPDL-LTTNIYTYTGDARF----------SVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTEPK 151 (163)
Q Consensus 83 ~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~~~~~ 151 (163)
.+....+..|..+.+.|... ....+.|++++..+ .+.. ......|.|.+++.+|+|.|+|.|.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~~~v~W~k~g~~i~~~~~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n--- 88 (101)
T 2edk_A 14 PLEDQQVFVGDRVEMAVEVSEEGAQVMWMKNGVELTREDSFKARYRFKK--DGKRHILIFSDVVQEDRGRYQVITNG--- 88 (101)
T ss_dssp CCCCEEEESSCCCBCCEEESCSSCCCEEEESSCBCCCSCCSSCCCEEEE--CSSEEEEECSSCCGGGCSBEEEECSS---
T ss_pred cCCceEEcCCCCEEEEEEEeCCCCEEEEEECCEECCCCCCcceeEEEEE--CCCEEEEEECCCChhhCEEEEEEEcC---
Confidence 34456777888888888632 12678899876533 2221 23356799999999999999999932
Q ss_pred ccEEEEEEEecC
Q psy3125 152 MNMAIMLNVDGK 163 (163)
Q Consensus 152 ~~~~~~L~V~~~ 163 (163)
.+..+.|.|.++
T Consensus 89 ~~~~~~l~V~~~ 100 (101)
T 2edk_A 89 GQCEAELIVEEK 100 (101)
T ss_dssp CEECCBEEEECC
T ss_pred CcEEEEEEEeCC
Confidence 445667777653
No 496
>3dmm_C T-cell surface glycoprotein CD8 alpha chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.83 E-value=2.4e-08 Score=65.13 Aligned_cols=69 Identities=17% Similarity=0.436 Sum_probs=47.6
Q ss_pred CceEEecCC-CcEEEEEecCCe-------eEEecce---E-ec----CCCeEEEeccCCCCeEEEEEcccCcCCCeeEEE
Q psy3125 1 MACTVMGLG-RPVSWMRKRDLH-------ILTTNIY---T-YT----GDARFSVIHPQNSDEWNMKIDYAQKRDAGIYEC 64 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~~-------~~~~~~~---~-~~----~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 64 (163)
|.|.+.... ..|.|+|+..+. ++..... . +. ..+||.+..+. .+.++|.|.+++.+|+|.|.|
T Consensus 29 L~C~~s~~~~~~v~WyrQ~pg~~~~~p~~Li~~~~~~~~~~y~~~~~~~~Rfs~s~~~-~~~~sL~I~~vq~eDsG~YyC 107 (166)
T 3dmm_C 29 LVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDT-NNKYVLTLNKFSKENEGYYFC 107 (166)
T ss_dssp EEEEEESSSCCEEEEEEEETTCSCCSCEEEEEEESSSCCEEECGGGSSCCSEEEECST-TTEEEEEESSCCTTTCEEEEE
T ss_pred EEEEEeCCCCceEEEEEECCCCCCCCcEEEEEEeCCCCceeeccccccccceEEEcCC-CCEEEEEECCCChhhCEEEEE
Confidence 579998555 889999864321 2221111 1 11 25789888643 445999999999999999999
Q ss_pred EeeCCC
Q psy3125 65 QVNTEP 70 (163)
Q Consensus 65 ~~~~~~ 70 (163)
.+....
T Consensus 108 a~~~~~ 113 (166)
T 3dmm_C 108 SVISNS 113 (166)
T ss_dssp EEESSS
T ss_pred EECCCC
Confidence 996543
No 497
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.82 E-value=2.2e-08 Score=61.07 Aligned_cols=76 Identities=16% Similarity=0.185 Sum_probs=49.7
Q ss_pred eEeeCCCeEEEecCCCC--ceeEEEEeCCCe-----E---------EEecC-CCC-----ceEEEEecccCcCCCeeEEE
Q psy3125 87 ARLSAGPLLNFAFPDLL--TTNIYTYTGDAR-----F---------SVIHP-QNS-----DEWNMKIDYAQKRDAGIYEC 144 (163)
Q Consensus 87 ~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~---------~~~~~-~~~-----~~~~L~i~~v~~~D~G~Y~C 144 (163)
+.+..|..+.+.|...+ ...+.|++.... + ..... ..+ ...+|.|++++.+|+|.|+|
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~G~Ytc 89 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDAGFYTL 89 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCCeEEEE
Confidence 45677888888886432 345788776421 0 11100 011 13469999999999999999
Q ss_pred Ec-CCCC-CccEEEEEEEec
Q psy3125 145 QV-NTEP-KMNMAIMLNVDG 162 (163)
Q Consensus 145 ~a-~~~~-~~~~~~~L~V~~ 162 (163)
++ +..+ .....+.|.|..
T Consensus 90 ~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 90 HVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEETTSCCEEEEEEEEEEC
T ss_pred EEEeCCCcEEEEEEEEEEec
Confidence 99 6544 467788888864
No 498
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=98.82 E-value=1.9e-09 Score=65.85 Aligned_cols=76 Identities=14% Similarity=0.264 Sum_probs=47.4
Q ss_pred CceEEecCC--CcEEEEEecCCeeEEe--cce-----EecCC----CeEEEeccCCCCeEEEEEcccCcCCCeeEEEEee
Q psy3125 1 MACTVMGLG--RPVSWMRKRDLHILTT--NIY-----TYTGD----ARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVN 67 (163)
Q Consensus 1 l~C~~~~~~--~~v~W~k~~~~~~~~~--~~~-----~~~~~----~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~ 67 (163)
|+|.+.... ..|.|.+ ...+... +.. ....+ +|..+. ..+++|.|.|++.+|+|.|.|++.
T Consensus 19 L~c~~~~~~~~~~i~W~~--~~~ia~~~~~~~~~~~~~~~~~~~f~~Rl~l~----~~~~SL~I~nl~~~DsG~Y~c~i~ 92 (111)
T 2pkd_A 19 FPVNIQEPRQVKIIAWTS--KTSVAYVTPGDSETAPVVTVTHRNYYERIHAL----GPNYNLVISDLRMEDAGDYKADIN 92 (111)
T ss_dssp ECCCCCTTCCEEEEEEES--SSEEEEEECCCSSSCCEEEECSGGGTTCEEEC----TTTCCEEECSCCGGGCEEEEEEEE
T ss_pred EeCccCCCCeeeEEEEec--CCEEEEEECCCCCCcceeEEeCCCcCCcEEEe----CCCEEEEECCCCHHHCEEEEEEEE
Confidence 567766423 6889984 2222211 111 11122 455554 247889999999999999999995
Q ss_pred CCC---CeeEEEEEEEEc
Q psy3125 68 TEP---KMNMAIMLNVDD 82 (163)
Q Consensus 68 ~~~---~~~~~~~l~V~~ 82 (163)
... .....+.|.|.+
T Consensus 93 ~~~~~~~~~~~~~L~V~~ 110 (111)
T 2pkd_A 93 TQADPYTTTKRYNLQIYR 110 (111)
T ss_dssp ESSTTSEEEEEEEEEEEC
T ss_pred eCCCCceEEEEEEEEEEc
Confidence 432 245677888864
No 499
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.82 E-value=3.2e-08 Score=66.57 Aligned_cols=143 Identities=12% Similarity=0.139 Sum_probs=79.8
Q ss_pred CceEEecCC-CcEEEEEecCC---eeE-Eec-ceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEeeCC--CCe
Q psy3125 1 MACTVMGLG-RPVSWMRKRDL---HIL-TTN-IYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQVNTE--PKM 72 (163)
Q Consensus 1 l~C~~~~~~-~~v~W~k~~~~---~~~-~~~-~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~--~~~ 72 (163)
|.|.+.+.. ..+.|+|+..+ ..+ ... .......+||.+..+...+.++|.|.+++.+|+|.|.|.+... ...
T Consensus 20 L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~DsG~Y~Ca~~~~~~~~f 99 (200)
T 3rgv_A 20 INCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEIDSAVYYCAANSGTYQRF 99 (200)
T ss_dssp ECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTTCEEEEEEEESSSCCCC
T ss_pred EEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCccCCCEEEEeccCccccc
Confidence 579999876 88999996432 222 211 1111125799988654567899999999999999999999431 122
Q ss_pred eEEEEEEEEcC--CCceEee----CCCeEEEecCC---CCceeEEEEeCCCeEEE-----ecCCCCceEEEEecccCcCC
Q psy3125 73 NMAIMLNVDDR--GRGARLS----AGPLLNFAFPD---LLTTNIYTYTGDARFSV-----IHPQNSDEWNMKIDYAQKRD 138 (163)
Q Consensus 73 ~~~~~l~V~~~--~~~~~v~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~D 138 (163)
...+.|.|... ++.+.|. ......+.|.. .+...+.|...+..+.. ..+.....+.+ .+.-.+
T Consensus 100 G~GT~L~V~~~~~~~~P~V~~~~~~~~~~tl~Cl~~gf~P~i~v~~~~~g~~~~~~~t~~~~~~~~~~~~~---~~~w~~ 176 (200)
T 3rgv_A 100 GTGTKLQVVPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNS---AVAWSN 176 (200)
T ss_dssp CCCEEEEEECCCSSCCCEEEEEEESSSSSCEEEEEESCCTTCCCCCCSSTTCEECCCEEEEEGGGTEEEEE---EEEECS
T ss_pred CcCEEEEEeCCCCCCCCeEEEccCCCCCceEEEEcccccCCeEeEeccCCcEEeecceEEccccccccccc---eEEecC
Confidence 34456777753 2222221 11113344521 12455666666554321 11111112222 224466
Q ss_pred CeeEEEEc
Q psy3125 139 AGIYECQV 146 (163)
Q Consensus 139 ~G~Y~C~a 146 (163)
-+.|.|.+
T Consensus 177 ~~~~~c~~ 184 (200)
T 3rgv_A 177 KSDFACAN 184 (200)
T ss_dssp CSSCCTTT
T ss_pred CCceEeee
Confidence 67788877
No 500
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.81 E-value=1.8e-07 Score=65.21 Aligned_cols=122 Identities=15% Similarity=0.194 Sum_probs=72.4
Q ss_pred CceEEecC-C----CcEEEEEecCCeeEEecceEecCCCeEEEeccCCCCeEEEEEcccCcCCCeeEEEEe-eCCCCeeE
Q psy3125 1 MACTVMGL-G----RPVSWMRKRDLHILTTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQKRDAGIYECQV-NTEPKMNM 74 (163)
Q Consensus 1 l~C~~~~~-~----~~v~W~k~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~-~~~~~~~~ 74 (163)
|.|.+.+- | ..++|+| ++..+ .....+|.|..+...|+|.|+|++ +..+....
T Consensus 22 LTatVaGGkP~pspyTYqWyK--DG~~I-------------------sGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~t 80 (304)
T 3shs_A 22 LTATVAGDEPLPSNLTYTWTK--DDQPH-------------------ENNTATLTVADATSENAGSYKVTVQDTDTMTSV 80 (304)
T ss_dssp EEEEEEESSSCCCCEEEEEEE--TTEEC-------------------SCCSSEEEESSCCGGGCEEEEEEEEETTTCCEE
T ss_pred EEEEecCCCCCCCCceEEEEE--CCccc-------------------cCCcceEEeeeccccCCeEEEEEEEECCCCeee
Confidence 56887754 3 4799998 32211 112346999999999999999999 43332221
Q ss_pred EEEEEEEcC---------CCceEeeCCCeEEEecCC-----CC-----ceeEEEEeCCCeEEEecCCCCceEEEEecccC
Q psy3125 75 AIMLNVDDR---------GRGARLSAGPLLNFAFPD-----LL-----TTNIYTYTGDARFSVIHPQNSDEWNMKIDYAQ 135 (163)
Q Consensus 75 ~~~l~V~~~---------~~~~~v~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 135 (163)
...+.|... +..+.+..+..+.+.... .+ .....|++++..+ .... .|++....
T Consensus 81 Ss~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~I--sgAq-----~lT~sS~T 153 (304)
T 3shs_A 81 ESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVI--DTTQ-----DITIQEFT 153 (304)
T ss_dssp ECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEE--ESSS-----EEEECSCC
T ss_pred eeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEc--cCcc-----ccceeeEE
Confidence 111222221 222333344444444321 11 3578898887633 2222 38888899
Q ss_pred cCCCeeEEEEc-CCCC
Q psy3125 136 KRDAGIYECQV-NTEP 150 (163)
Q Consensus 136 ~~D~G~Y~C~a-~~~~ 150 (163)
..++|.|.|.+ +..+
T Consensus 154 ateaG~YtV~VTn~~~ 169 (304)
T 3shs_A 154 ADKNGVYTVKVWGESE 169 (304)
T ss_dssp GGGCEEEEEEEESSSG
T ss_pred ecCCeEEEEEEEcCCC
Confidence 99999999999 6654
Done!