Query psy313
Match_columns 93
No_of_seqs 73 out of 75
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 17:11:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy313.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/313hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a98_B Engulfment and cell mot 100.0 9.2E-39 3.1E-43 237.5 11.5 89 3-93 112-200 (203)
2 2rqr_A CED-12 homolog, engulfm 98.8 1E-09 3.5E-14 74.2 2.6 32 62-93 4-35 (119)
3 1mai_A Phospholipase C delta-1 98.6 8.3E-08 2.8E-12 65.1 5.2 39 5-44 84-122 (131)
4 2zkm_X 1-phosphatidylinositol- 97.0 0.00055 1.9E-08 58.5 4.3 43 4-46 94-138 (799)
5 3ohm_B 1-phosphatidylinositol- 97.0 0.00045 1.5E-08 60.1 3.7 42 3-44 97-140 (885)
6 3qr0_A Phospholipase C-beta (P 95.0 0.028 9.5E-07 48.5 5.2 39 6-44 103-143 (816)
7 2ys3_A UNC-112-related protein 93.4 0.35 1.2E-05 33.8 7.2 54 7-60 75-130 (137)
8 2cof_A Protein KIAA1914; PH do 88.2 0.66 2.3E-05 28.6 4.0 39 6-46 66-104 (107)
9 1u5d_A SKAP55, SRC kinase-asso 87.7 1.1 3.9E-05 26.7 4.8 35 6-42 70-104 (108)
10 1v89_A Hypothetical protein KI 87.4 1.4 4.6E-05 26.9 5.1 41 6-46 70-115 (118)
11 1x1g_A Pleckstrin 2; PH domain 87.1 1.1 3.7E-05 28.1 4.6 39 6-46 89-127 (129)
12 4bbk_A Kindlin-1, fermitin fam 87.0 1.8 6.3E-05 31.3 6.3 53 8-60 93-147 (165)
13 1v5u_A SBF1, SET binding facto 86.1 1.7 5.9E-05 26.5 5.1 38 7-47 78-115 (117)
14 1btn_A Beta-spectrin; signal t 85.7 1.4 4.7E-05 26.5 4.4 33 6-40 73-105 (106)
15 2w2x_D 1-phosphatidylinositol- 85.2 1.2 4E-05 28.7 4.1 37 6-42 82-118 (124)
16 3aj4_A Pleckstrin homology dom 84.4 2 6.9E-05 26.2 4.8 35 6-42 76-110 (112)
17 2i5f_A Pleckstrin; PH domain, 84.1 2.1 7.2E-05 25.8 4.7 36 5-42 73-108 (109)
18 2d9v_A Pleckstrin homology dom 83.4 3.1 0.00011 26.6 5.6 38 6-45 79-116 (130)
19 3cxb_B Pleckstrin homology dom 83.0 3.2 0.00011 26.1 5.4 37 6-44 66-102 (112)
20 2d9y_A Pleckstrin homology dom 82.6 3.2 0.00011 25.2 5.2 36 6-43 74-109 (117)
21 1wgq_A FYVE, rhogef and PH dom 81.8 4 0.00014 24.8 5.4 36 6-43 68-103 (109)
22 1pls_A Pleckstrin homology dom 81.5 2.4 8.2E-05 25.9 4.3 36 6-43 66-101 (113)
23 1u5f_A SRC-associated adaptor 80.4 2.9 9.9E-05 27.1 4.6 36 6-43 84-119 (148)
24 1x05_A Pleckstrin; PH domain, 79.8 3.9 0.00013 25.6 4.9 38 5-44 84-121 (129)
25 2yry_A Pleckstrin homology dom 79.8 3.6 0.00012 25.3 4.7 36 6-43 85-120 (122)
26 1wjm_A Beta-spectrin III; PH d 79.7 3.3 0.00011 25.9 4.6 36 6-43 82-117 (123)
27 1fgy_A GRP1; PH domain, signal 78.0 2.9 0.0001 25.7 3.9 24 20-43 97-120 (127)
28 2dkp_A Pleckstrin homology dom 77.3 4.1 0.00014 25.2 4.5 35 6-42 84-118 (128)
29 3rcp_A Pleckstrin homology dom 77.1 7.1 0.00024 23.3 5.4 37 6-44 58-94 (103)
30 4f7h_A Fermitin family homolog 77.0 3.9 0.00013 29.7 4.8 41 20-60 127-168 (173)
31 1dro_A Beta-spectrin; cytoskel 76.3 4.8 0.00016 25.3 4.6 36 6-43 84-119 (122)
32 1v88_A Oxysterol binding prote 76.2 5.8 0.0002 26.0 5.2 26 20-45 101-126 (130)
33 1v61_A RAC/CDC42 guanine nucle 76.1 6 0.0002 26.9 5.3 38 5-44 90-127 (132)
34 1fao_A Dual adaptor of phospho 76.0 6 0.0002 24.5 5.0 36 6-44 78-113 (126)
35 1upq_A PEPP1; PH domain, phosp 75.9 5.9 0.0002 24.3 4.9 37 6-44 74-110 (123)
36 1wg7_A Dedicator of cytokinesi 75.4 4.8 0.00016 25.9 4.6 36 6-43 89-124 (150)
37 2d9x_A Oxysterol binding prote 74.7 4.3 0.00015 25.3 4.1 35 6-42 69-103 (120)
38 2cod_A Centaurin-delta 1; ARF 74.7 6.3 0.00022 24.1 4.8 34 6-42 65-98 (115)
39 3qwm_A Iqsec1, IQ motif and SE 74.1 15 0.00051 25.5 7.0 37 4-40 80-119 (140)
40 2rlo_A Centaurin-gamma 1; spli 74.0 4.8 0.00017 25.5 4.2 35 6-42 89-123 (128)
41 1unq_A RAC-alpha serine/threon 73.6 6.4 0.00022 24.4 4.7 38 6-43 72-110 (125)
42 1eaz_A Tandem PH domain contai 73.1 6.7 0.00023 24.0 4.6 35 6-43 77-111 (125)
43 2rsg_A Collagen type IV alpha- 72.7 4.1 0.00014 24.1 3.4 32 6-40 60-91 (94)
44 2lul_A Tyrosine-protein kinase 71.3 7.9 0.00027 26.0 5.0 34 7-43 88-121 (164)
45 2da0_A 130-kDa phosphatidylino 69.5 9.5 0.00033 23.5 4.8 34 6-42 67-100 (114)
46 2dhk_A TBC1 domain family memb 69.3 7.9 0.00027 24.1 4.4 34 6-42 70-103 (119)
47 3lju_X ARF-GAP with dual PH do 68.0 8.2 0.00028 29.9 5.1 45 6-53 338-382 (386)
48 2dn6_A KIAA0640 protein; PH do 67.8 10 0.00036 22.8 4.6 35 6-43 69-103 (115)
49 2p0d_A RHO GTPase-activating p 65.3 11 0.00038 24.2 4.6 35 6-42 89-123 (129)
50 2j59_M RHO-GTPase activating p 64.8 13 0.00046 24.3 5.0 36 6-44 77-112 (168)
51 2fjl_A 1-phosphatidylinositol- 64.4 11 0.00038 26.4 4.7 37 5-41 110-146 (150)
52 3pp2_A RHO GTPase-activating p 63.0 11 0.00039 23.9 4.3 34 6-41 88-121 (124)
53 2rov_A RHO-associated protein 61.2 29 0.00098 22.3 6.0 37 6-42 75-114 (117)
54 2y7b_A Actin-binding protein a 60.6 13 0.00045 23.1 4.2 23 20-42 105-127 (134)
55 1v5p_A Pleckstrin homology dom 60.6 19 0.00066 23.2 5.1 34 7-43 87-120 (126)
56 3tca_A Amyloid beta A4 precurs 60.6 15 0.00052 25.9 4.9 38 5-42 235-275 (291)
57 1u5e_A SRC-associated adaptor 59.8 14 0.00047 26.1 4.6 35 6-42 173-207 (211)
58 1btk_A Bruton'S tyrosine kinas 59.8 17 0.00057 24.7 4.9 34 7-43 99-132 (169)
59 2coc_A FYVE, rhogef and PH dom 56.5 23 0.0008 22.6 4.9 34 6-42 72-105 (112)
60 3tfm_A Myosin X; split PH doma 56.1 18 0.00063 25.5 4.7 36 6-44 121-156 (228)
61 4a6h_A Phosphatidylinositol 4, 48.0 44 0.0015 21.5 5.2 38 5-42 76-117 (120)
62 1qqg_A IRS-1, insulin receptor 48.0 28 0.00097 25.5 4.8 37 6-45 78-114 (264)
63 1x1f_A Signal-transducing adap 46.9 33 0.0011 23.1 4.6 51 7-60 80-135 (149)
64 1dbh_A Protein (human SOS 1); 45.4 39 0.0013 24.8 5.2 40 5-46 313-352 (354)
65 3a8p_A T-lymphoma invasion and 43.9 29 0.00098 25.4 4.2 36 6-43 89-124 (263)
66 1bzk_A Protein (BAND 3 anion t 40.2 4.2 0.00014 23.1 -0.6 10 30-39 6-15 (43)
67 2vrw_B P95VAV, VAV1, proto-onc 39.8 48 0.0016 24.9 5.0 37 6-43 299-335 (406)
68 1dw9_A Cyanate lyase; cyanate 39.4 12 0.00042 26.4 1.5 52 39-91 45-97 (156)
69 1kz7_A Guanine nucleotide exch 38.7 50 0.0017 24.5 4.9 38 5-43 288-325 (353)
70 2dtc_A RAL guanine nucleotide 36.1 67 0.0023 21.3 4.8 38 5-43 75-112 (126)
71 4gmv_A RAS-associated and plec 34.7 72 0.0025 24.0 5.3 40 3-42 223-265 (281)
72 1wi1_A Calcium-dependent activ 34.1 83 0.0028 21.1 5.0 36 6-44 76-111 (126)
73 2z0q_A XPLN, RHO guanine nucle 31.7 69 0.0023 23.3 4.6 37 5-41 307-344 (346)
74 3a8n_A TIAM-1, T-lymphoma inva 31.6 35 0.0012 25.7 3.1 35 6-42 89-123 (279)
75 4h8s_A DCC-interacting protein 31.6 75 0.0026 24.0 4.9 38 6-44 362-399 (407)
76 2r09_A Cytohesin-3; autoinhibi 30.5 66 0.0022 24.2 4.5 27 19-45 304-330 (347)
77 3hk0_A Growth factor receptor- 29.6 76 0.0026 23.5 4.6 39 4-42 198-239 (256)
78 1nty_A Triple functional domai 26.5 1.1E+02 0.0037 22.0 4.9 38 6-43 269-308 (311)
79 3lju_X ARF-GAP with dual PH do 25.6 87 0.003 24.0 4.4 36 6-41 208-244 (386)
80 2rgn_B RHOA/RAC/CDC42 exchange 25.5 1.1E+02 0.0036 22.7 4.8 37 6-42 279-317 (354)
81 2dfk_A Collybistin II; DH doma 24.9 1.1E+02 0.0038 23.1 4.8 35 6-41 327-361 (402)
82 1wa7_B TIP, hypothetical 28.7 24.6 39 0.0013 17.4 1.5 11 79-89 7-17 (26)
83 2q13_A DCC-interacting protein 22.1 1.1E+02 0.0039 22.8 4.4 38 7-45 340-377 (385)
84 3um3_B Charged multivesicular 20.8 1.8E+02 0.0062 18.9 6.2 49 30-78 17-74 (104)
85 2pz1_A RHO guanine nucleotide 20.4 1.3E+02 0.0044 22.9 4.4 36 6-42 404-439 (466)
No 1
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=100.00 E-value=9.2e-39 Score=237.48 Aligned_cols=89 Identities=54% Similarity=0.971 Sum_probs=85.6
Q ss_pred CcCcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHchhhhhhhcccCCCCCCCCCCCC
Q psy313 3 KIPDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKMTSKEADNDLETLLSMEIKIRLLDAEGVEIPHHPPEV 82 (93)
Q Consensus 3 ~~~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m~S~et~~dv~~Ll~melKlrLLdlegv~IP~~~p~I 82 (93)
++.++||||+++++ .+|+|+|+|++++++|+||||+|+|++|+|+||+++|++|++||+||||||||||+||++||||
T Consensus 112 ~~~~laFSii~~~~--~~L~fvA~s~~~~~~W~DGL~~Llg~~~~S~et~~~v~~Ll~m~lklrLLdle~v~ip~~~ppi 189 (203)
T 3a98_B 112 EVLELAFSILYDSN--CQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPI 189 (203)
T ss_dssp TTGGGEEEEEETTT--EEEEEECSSHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHTGGGTTCCCCSSCCCC
T ss_pred cccceEEEEecCCC--ceEEEecCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcccCCcCCCCCCCC
Confidence 46779999999876 5699999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccC
Q psy313 83 PEEPRNYDFNF 93 (93)
Q Consensus 83 Pp~P~~~dF~~ 93 (93)
||+|+||||||
T Consensus 190 p~~P~~~dF~~ 200 (203)
T 3a98_B 190 PKEPSNYDFVY 200 (203)
T ss_dssp CCCCSCCCCSS
T ss_pred CcCCCCcceee
Confidence 99999999998
No 2
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=98.85 E-value=1e-09 Score=74.20 Aligned_cols=32 Identities=50% Similarity=0.893 Sum_probs=30.0
Q ss_pred hhhhhhcccCCCCCCCCCCCCCCCCCCCCccC
Q psy313 62 EIKIRLLDAEGVEIPHHPPEVPEEPRNYDFNF 93 (93)
Q Consensus 62 elKlrLLdlegv~IP~~~p~IPp~P~~~dF~~ 93 (93)
+-++||||+||++||+.+|++|++|.||||||
T Consensus 4 ~~~~~~~~~~~~~iP~~pPP~pp~Psn~~F~~ 35 (119)
T 2rqr_A 4 GSSGRLLDLENIQIPDAPPPIPKEPSNYDFSG 35 (119)
T ss_dssp CCCCCCCSSCCCCCCSSCCCCCCCCSSCCCCS
T ss_pred cccceeecccCCCCCCCCCCCCCCCCcccccc
Confidence 45899999999999999999999999999986
No 3
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.56 E-value=8.3e-08 Score=65.13 Aligned_cols=39 Identities=23% Similarity=0.559 Sum_probs=34.5
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
.+.+|||+|.... ..|++||+|+.+++.|++||+.|+++
T Consensus 84 ~~~~FsIiy~~~~-k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 84 EDRCFSIVFKDQR-NTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp GGGEEEEEESSSC-CCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred ccceEEEEECCCC-ceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 5789999999863 46999999999999999999999984
No 4
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=96.99 E-value=0.00055 Score=58.53 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=37.0
Q ss_pred cCcceeeEEecCCCc--eeEEEecCChhHHHHHHHHHHHhhCCCC
Q psy313 4 IPDIAFSLTLDSVEI--TSLDFVAPDEEVFDYWTDGINALLGNKM 46 (93)
Q Consensus 4 ~~~laFSl~~~~~e~--~~l~~va~~~~~~~~W~DGln~Llg~~m 46 (93)
..+.+|||+|..+.. ..|+|||+++.++..|++||+.|+++.+
T Consensus 94 ~e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~~ 138 (799)
T 2zkm_X 94 FLLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHPL 138 (799)
T ss_dssp GGGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCTT
T ss_pred cccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999998653 3699999999999999999999998654
No 5
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=96.98 E-value=0.00045 Score=60.13 Aligned_cols=42 Identities=14% Similarity=0.346 Sum_probs=35.5
Q ss_pred CcCcceeeEEecCCCc--eeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 3 KIPDIAFSLTLDSVEI--TSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 3 ~~~~laFSl~~~~~e~--~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+..+.+|||+|..+.. ..|+|||+++.++..|++||+.|+++
T Consensus 97 ~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 97 RLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp --CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred cccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 3457899999997643 37999999999999999999999985
No 6
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=95.05 E-value=0.028 Score=48.54 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=32.9
Q ss_pred cceeeEEecCCCce--eEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEIT--SLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~--~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+-.|+|+|..+-.. .++|||+++.++..|+.||+.|..+
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~ 143 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYN 143 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTC
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 56899999875322 5699999999999999999999864
No 7
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.36 E-value=0.35 Score=33.83 Aligned_cols=54 Identities=19% Similarity=0.372 Sum_probs=41.4
Q ss_pred ceeeEEecCCCc-eeEEEecCChhHHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHc
Q psy313 7 IAFSLTLDSVEI-TSLDFVAPDEEVFDYWTDGINALL-GNKMTSKEADNDLETLLS 60 (93)
Q Consensus 7 laFSl~~~~~e~-~~l~~va~~~~~~~~W~DGln~Ll-g~~m~S~et~~dv~~Ll~ 60 (93)
.+|.+...+.|. ...-+.|.++++++.|+..++.-. |+.|+....+.+|+.+++
T Consensus 75 f~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAskgktma~~sy~~ev~~i~~ 130 (137)
T 2ys3_A 75 FCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASKGRTMADSSYTSEVQAILA 130 (137)
T ss_dssp EEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHHTSCCTTSTHHHHHHHHHHH
T ss_pred eEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhccCcchhhhhhHHHHHHHHH
Confidence 344455444322 358888999999999999998766 569999999999998754
No 8
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=88.22 E-value=0.66 Score=28.63 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=32.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKM 46 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m 46 (93)
+..|.|.... ...+.|.|.++++...|++.|+...|...
T Consensus 66 ~~~F~i~~~~--~r~~~l~A~s~~e~~~Wi~al~~~~~~~~ 104 (107)
T 2cof_A 66 LYSFRILHKG--EELAKLEAKSSEEMGHWLGLLLSESGSGP 104 (107)
T ss_dssp SCEEEEEETT--EEEEEEECSSHHHHHHHHHHHHHHSSCSS
T ss_pred CeEEEEEeCC--CeEEEEEcCCHHHHHHHHHHHHHHHcCCC
Confidence 4678888753 24589999999999999999999888654
No 9
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=87.73 E-value=1.1 Score=26.73 Aligned_cols=35 Identities=29% Similarity=0.450 Sum_probs=28.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+.+|.|....+ ..+.|.|.++++...|.+.|+..+
T Consensus 70 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~ai~~~i 104 (108)
T 1u5d_A 70 ESCFELTSQDR--RTYEFTATSPAEARDWVDQISFLL 104 (108)
T ss_dssp GGEEEEECSSS--CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCC--cEEEEECCCHHHHHHHHHHHHHHH
Confidence 46788876542 348899999999999999998654
No 10
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=87.39 E-value=1.4 Score=26.88 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=31.2
Q ss_pred cceeeEEecCC-----CceeEEEecCChhHHHHHHHHHHHhhCCCC
Q psy313 6 DIAFSLTLDSV-----EITSLDFVAPDEEVFDYWTDGINALLGNKM 46 (93)
Q Consensus 6 ~laFSl~~~~~-----e~~~l~~va~~~~~~~~W~DGln~Llg~~m 46 (93)
+..|.|..... ....+.|.|.++++...|.+.|+......-
T Consensus 70 ~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 70 KFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp CCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred cceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccCC
Confidence 56888887421 123588999999999999999998876543
No 11
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=87.13 E-value=1.1 Score=28.13 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=31.5
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKM 46 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m 46 (93)
+..|.|..... ..+.|.|.++++...|.+.|+....+.+
T Consensus 89 ~~~F~I~~~~~--r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 127 (129)
T 1x1g_A 89 GNLFKVITKDD--THYYIQASSKAERAEWIEAIKKLTSGPS 127 (129)
T ss_dssp SSCEEECCTTC--CCEEECCSSHHHHHHHHHHHHHHSSSSC
T ss_pred CceEEEEcCCC--CEEEEEcCCHHHHHHHHHHHHHHHhccc
Confidence 56788876543 3488999999999999999999887654
No 12
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=87.03 E-value=1.8 Score=31.27 Aligned_cols=53 Identities=13% Similarity=0.298 Sum_probs=40.4
Q ss_pred eeeEEecCCC-ceeEEEecCChhHHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHc
Q psy313 8 AFSLTLDSVE-ITSLDFVAPDEEVFDYWTDGINALL-GNKMTSKEADNDLETLLS 60 (93)
Q Consensus 8 aFSl~~~~~e-~~~l~~va~~~~~~~~W~DGln~Ll-g~~m~S~et~~dv~~Ll~ 60 (93)
+|.|...+.+ ..-+-+-+.++.+++.|+-+.++-. |+.|+...++.+|+.+++
T Consensus 93 ~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAskGkTmADsSy~sEv~~il~ 147 (165)
T 4bbk_A 93 GIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASKGKTMADSSYQPEVISILS 147 (165)
T ss_dssp EEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHTTCCTTSTTHHHHHHHHHH
T ss_pred eEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhcccccchhhhhhhHHHHHHHH
Confidence 3444444332 2246688999999999999999876 689999999999998765
No 13
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=86.07 E-value=1.7 Score=26.53 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.9
Q ss_pred ceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCCC
Q psy313 7 IAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKMT 47 (93)
Q Consensus 7 laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m~ 47 (93)
..|.|.... ..+.|.|.++++...|.+.|+..+.+.-.
T Consensus 78 ~~F~i~~~~---r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 115 (117)
T 1v5u_A 78 AFFDVKTTR---RVYNFCAQDVPSAQQWVDRIQSCLSSGPS 115 (117)
T ss_dssp TCEEEEESS---CEEEEECSSHHHHHHHHHHHHTTCCCCCC
T ss_pred eEEEEECCC---ceEEEECCCHHHHHHHHHHHHHHhccCCC
Confidence 678885432 34889999999999999999988776543
No 14
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=85.65 E-value=1.4 Score=26.52 Aligned_cols=33 Identities=27% Similarity=0.476 Sum_probs=26.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHH
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINA 40 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~ 40 (93)
+..|.|....+ ..+-|.|.|+.+...|.+.|+.
T Consensus 73 ~~~F~i~~~~~--~~~~~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 73 KHVFKLRLSDG--NEYLFQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp SSEEEEECTTS--CEEEEECSSHHHHHHHHHHHHH
T ss_pred ccEEEEEecCC--CEEEEECCCHHHHHHHHHHHhc
Confidence 45788876543 3488999999999999998874
No 15
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=85.22 E-value=1.2 Score=28.73 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=29.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+.+|.|.........+.|.|.++++...|...|+...
T Consensus 82 ~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~ 118 (124)
T 2w2x_D 82 SFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREIT 118 (124)
T ss_dssp SEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHH
Confidence 4789998765433458999999999999999998654
No 16
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=84.44 E-value=2 Score=26.25 Aligned_cols=35 Identities=9% Similarity=0.125 Sum_probs=27.9
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+..|.|....+ ..+.|.|.++++...|.+.|+...
T Consensus 76 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 76 DCMLQIVCRDG--KTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp GGEEEEEETTS--CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCC--cEEEEEeCCHHHHHHHHHHHHHHh
Confidence 46899876543 348999999999999999998643
No 17
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=84.07 E-value=2.1 Score=25.78 Aligned_cols=36 Identities=11% Similarity=0.107 Sum_probs=28.5
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
.+.+|.|..... ..+.|.|.++++...|.+.|+...
T Consensus 73 ~~~~F~i~~~~~--~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 73 EENLFEIITADE--VHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp CCSEEEEECTTC--CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCC--CEEEEEcCCHHHHHHHHHHHHHHh
Confidence 456788876643 348899999999999999998653
No 18
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=83.42 E-value=3.1 Score=26.64 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=30.1
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNK 45 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~ 45 (93)
+..|.|....+ ..+.|.|.++++...|...|+......
T Consensus 79 ~~~F~I~~~~~--r~~~l~A~s~~e~~~Wi~al~~a~~~~ 116 (130)
T 2d9v_A 79 DGLLTVNLREG--SRLHLCAETRDDAIAWKTALMEANSTP 116 (130)
T ss_dssp TTEEEEEETTS--CEEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred CcEEEEEeCCC--CEEEEEcCCHHHHHHHHHHHHHHHcCC
Confidence 46788887543 348999999999999999999776543
No 19
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=82.96 E-value=3.2 Score=26.11 Aligned_cols=37 Identities=19% Similarity=0.331 Sum_probs=29.7
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+.+|.|....+. .+-|.|.|+++...|...|+....+
T Consensus 66 ~~~F~l~~~~~~--~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 66 PHAFQVILSDRP--CLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp TTEEEEEETTSC--CEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEcCCCC--EEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 468999866542 3789999999999999999876654
No 20
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.63 E-value=3.2 Score=25.23 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=28.9
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+.+|.|..... ..+.|.|.++++...|.+.|+....
T Consensus 74 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 74 KHTFKAEHAGV--RTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp SSEEEEECSSS--CEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred ccEEEEEcCCC--cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 45788865443 3489999999999999999998775
No 21
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=81.81 E-value=4 Score=24.79 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=29.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|.... ...+.|.|.++.+...|.+.|+...-
T Consensus 68 ~~~F~i~~~~--~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 68 SKVFQLLHKG--MVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp SSEEEEEETT--EEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEeCC--CeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 4688887643 24589999999999999999987654
No 22
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=81.47 E-value=2.4 Score=25.92 Aligned_cols=36 Identities=25% Similarity=0.240 Sum_probs=29.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|....+ ..+.|.|.++.+...|...|+...+
T Consensus 66 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~ai~~~~~ 101 (113)
T 1pls_A 66 MFVFKITTTKQ--QDHFFQAAFLEERDAWVRDINKAIK 101 (113)
T ss_dssp SSEEEEEETTT--EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEcCCC--CEEEEECCCHHHHHHHHHHHHHHHh
Confidence 45788876543 4588999999999999999988764
No 23
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=80.41 E-value=2.9 Score=27.08 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=29.9
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|....+ ..+.|.|.++.+...|+..|+..+.
T Consensus 84 ~~~F~I~~~~~--r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 84 DCCFEICAPDK--RIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp GGEEEEECTTS--CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ccEEEEECCCC--cEEEEECCCHHHHHHHHHHHHHHHH
Confidence 46788876542 3588999999999999999999886
No 24
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=79.81 E-value=3.9 Score=25.55 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=30.5
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
.+..|.|..... ..+.|.|.++++...|.+.|+.....
T Consensus 84 ~~~~F~i~~~~~--~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 84 EENLFEIITADE--VHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp SCSEEEEECTTC--CCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEcCCC--CEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 457788876543 34889999999999999999988753
No 25
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.80 E-value=3.6 Score=25.31 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=27.8
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+.+|.|....+ ..+.|.|.++.+...|.+.|+....
T Consensus 85 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 85 KHTFKAEHAGV--RTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp SSEEEEECSSS--CEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccEEEEecCCC--cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 45788864432 3589999999999999999987543
No 26
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=79.68 E-value=3.3 Score=25.91 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=28.6
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|....+ ..+-|.|.++++...|.+.|+....
T Consensus 82 ~~~F~i~~~~~--~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 82 KHVFKLGLQDG--KEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp SSEEEEECSSS--CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCC--cEEEEECCCHHHHHHHHHHHHHHHh
Confidence 45788876553 2478999999999999999987654
No 27
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=77.99 E-value=2.9 Score=25.73 Aligned_cols=24 Identities=25% Similarity=0.416 Sum_probs=21.8
Q ss_pred eEEEecCChhHHHHHHHHHHHhhC
Q psy313 20 SLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 20 ~l~~va~~~~~~~~W~DGln~Llg 43 (93)
.+.|.|.++++...|.+.|+..++
T Consensus 97 ~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 97 VYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHhc
Confidence 588999999999999999998765
No 28
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=77.31 E-value=4.1 Score=25.23 Aligned_cols=35 Identities=11% Similarity=0.270 Sum_probs=27.1
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+..|.|..... ..+.|.|.++.+...|.+.|+...
T Consensus 84 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 84 KYAFKAAHPNM--RTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp CSEEEEECSSS--CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCC--CEEEEEcCCHHHHHHHHHHHHHHH
Confidence 45788876542 348899999999999999996544
No 29
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=77.12 E-value=7.1 Score=23.30 Aligned_cols=37 Identities=8% Similarity=0.133 Sum_probs=29.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+..|.|....+ ..+.|.|.++.+...|...|+.-...
T Consensus 58 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 58 NTRMELIIPGE--QHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp SSEEEEEETTT--EEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred CceEEEEeCCC--CEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 45788876432 45999999999999999999876653
No 30
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=76.98 E-value=3.9 Score=29.72 Aligned_cols=41 Identities=15% Similarity=0.328 Sum_probs=35.4
Q ss_pred eEEEecCChhHHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHc
Q psy313 20 SLDFVAPDEEVFDYWTDGINALL-GNKMTSKEADNDLETLLS 60 (93)
Q Consensus 20 ~l~~va~~~~~~~~W~DGln~Ll-g~~m~S~et~~dv~~Ll~ 60 (93)
-.-+-+.++.+++.|+-+.++-. |+.|+...+..+|+.+++
T Consensus 127 e~~Lrcd~E~qya~WMAAcrLAskGktmAdssy~~Ev~~i~~ 168 (173)
T 4f7h_A 127 EIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILS 168 (173)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHTTCCTTSTHHHHHHHHHHH
T ss_pred eeeeecCCHHHHHHHHHHhhhhccCCccccccchHHHHHHHH
Confidence 36677999999999999998765 689999999999998765
No 31
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=76.31 E-value=4.8 Score=25.29 Aligned_cols=36 Identities=14% Similarity=0.229 Sum_probs=28.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|....+ ...-|.|.|+++...|...|+....
T Consensus 84 ~~~F~l~t~~~--~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 84 KHVLRVKLANG--ALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp TTEEEEECSSS--CEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CeEEEEEEcCC--CEEEEECCCHHHHHHHHHHHHHHHH
Confidence 45788875443 3377999999999999999997665
No 32
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=76.21 E-value=5.8 Score=26.04 Aligned_cols=26 Identities=23% Similarity=0.233 Sum_probs=22.6
Q ss_pred eEEEecCChhHHHHHHHHHHHhhCCC
Q psy313 20 SLDFVAPDEEVFDYWTDGINALLGNK 45 (93)
Q Consensus 20 ~l~~va~~~~~~~~W~DGln~Llg~~ 45 (93)
.+.|.|.++++...|++.|+..+...
T Consensus 101 ~~~f~A~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 101 YLIIRATSESDGRCWMDALELALKSG 126 (130)
T ss_dssp CCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 37899999999999999999887643
No 33
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=76.12 E-value=6 Score=26.89 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=31.2
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
.+.||-|.-...+ .+-++|.++++.+.|.+-|+.+...
T Consensus 90 ~~~aFeI~g~~~~--~i~v~~~s~eE~~~Wl~~L~~~i~~ 127 (132)
T 1v61_A 90 SDCMFEITGSTVE--RIVVHCNNNQDFQEWMEQLNRLTKS 127 (132)
T ss_dssp SCCCEEEECSSSC--EEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred CccEEEEecCCCc--eEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 5678988855433 3899999999999999999998863
No 34
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=76.02 E-value=6 Score=24.54 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=29.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+..|.|.... ..+.|.|.++.+...|.+.|+..+.+
T Consensus 78 ~~~F~i~~~~---r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 78 VNCFCLVFPF---RTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp SSEEEEEETT---EEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCC---cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 4578887532 35889999999999999999987754
No 35
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=75.93 E-value=5.9 Score=24.29 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=28.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
...|.|..... ..+.|.|.++.+...|...|+.....
T Consensus 74 ~~~f~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 74 RFTFTAEHPGM--RTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp SSEEEEECTTS--CCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred cEEEEEECCCC--eEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 45666654432 34889999999999999999988764
No 36
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=75.45 E-value=4.8 Score=25.92 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=29.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|..... ..+.|.|.++.+...|...|+..+.
T Consensus 89 ~~~F~i~~~~~--r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 89 RFAFELKMQDK--SSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp TTEEEEECSSS--CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCC--cEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 46788877642 3589999999999999999998765
No 37
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.72 E-value=4.3 Score=25.30 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=27.7
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
...|.|....+ ..+.|.|.++.+...|.+.|+...
T Consensus 69 ~~~F~i~~~~~--r~~~l~a~s~~e~~~Wi~al~~~~ 103 (120)
T 2d9x_A 69 SHTFTVNAASG--EQYKLRATDAKERQHWVSRLQICT 103 (120)
T ss_dssp SSCEEECCSSS--CCEEECCSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCC--CEEEEECCCHHHHHHHHHHHHHHH
Confidence 46788876542 348999999999999999998654
No 38
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=74.68 E-value=6.3 Score=24.10 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=27.5
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+..|.|.. ++ ..+.|.|.++++...|.+.|+...
T Consensus 65 ~~~F~i~~-~~--r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 65 DNKFEVVT-TQ--RTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp TTEEEEEE-SS--CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEe-CC--cEEEEECCCHHHHHHHHHHHHHHH
Confidence 46788873 32 348899999999999999999776
No 39
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=74.13 E-value=15 Score=25.47 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=29.1
Q ss_pred cCcceeeEEecC-C--CceeEEEecCChhHHHHHHHHHHH
Q psy313 4 IPDIAFSLTLDS-V--EITSLDFVAPDEEVFDYWTDGINA 40 (93)
Q Consensus 4 ~~~laFSl~~~~-~--e~~~l~~va~~~~~~~~W~DGln~ 40 (93)
-++.+|.|+..+ | ++..+.|.|+++++-+.|.+.|+.
T Consensus 80 ~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~e 119 (140)
T 3qwm_A 80 YYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRE 119 (140)
T ss_dssp SCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHH
Confidence 356678888765 2 245799999999999999999853
No 40
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=73.97 E-value=4.8 Score=25.49 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=27.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
...|.|....+ ..+.|.|.++++...|...|+..+
T Consensus 89 ~~~F~I~t~~~--r~~~l~A~s~~e~~~Wi~ai~~~i 123 (128)
T 2rlo_A 89 NFEFLIVSSTG--QTWHFEAASFEERDAWVQAIESQI 123 (128)
T ss_dssp CCCEEEECTTS--CEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCC--CEEEEEcCCHHHHHHHHHHHHHHH
Confidence 45788765542 358999999999999999998654
No 41
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=73.57 E-value=6.4 Score=24.42 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=28.9
Q ss_pred cceeeEEecCC-CceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSV-EITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~-e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|..... ....+.|.|.++.+...|.+.|+....
T Consensus 72 ~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~ 110 (125)
T 1unq_A 72 PNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVAD 110 (125)
T ss_dssp TTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 56788876321 123578999999999999999987764
No 42
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=73.12 E-value=6.7 Score=24.04 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=28.0
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|.... ..+.|.|.++++...|.+.|+..+.
T Consensus 77 ~~~F~i~~~~---r~~~l~a~s~~e~~~W~~al~~~i~ 111 (125)
T 1eaz_A 77 DNLFEIVTTS---RTFYVQADSPEEMHSWIKAVSGAIV 111 (125)
T ss_dssp SSEEEEECSS---CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC---cEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 5678887432 3488999999999999999988764
No 43
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=72.66 E-value=4.1 Score=24.14 Aligned_cols=32 Identities=19% Similarity=0.427 Sum_probs=25.4
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHH
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINA 40 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~ 40 (93)
+..|.|.... ..+.|.|.|+.+...|.+.|+.
T Consensus 60 ~~~F~i~~~~---r~~~l~A~s~~e~~~Wi~aLq~ 91 (94)
T 2rsg_A 60 ECRFDISVND---SVWYLRAQDPDHRQQWIDAIEQ 91 (94)
T ss_dssp SSEEEEEETT---EEEEEECCSSCCTHHHHHHHHH
T ss_pred ceeEEEEeCC---eEEEEECCCHHHHHHHHHHHHh
Confidence 4568776543 3589999999999999998864
No 44
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=71.34 E-value=7.9 Score=26.03 Aligned_cols=34 Identities=21% Similarity=0.443 Sum_probs=27.1
Q ss_pred ceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 7 IAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 7 laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
..|.|.... ..+.|.|.++.+...|++.|+....
T Consensus 88 ~~f~i~t~~---rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 88 YPFQVVHDA---NTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp SEEEEECSS---CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eeEEEecCC---cEEEEECCCHHHHHHHHHHHHHHHH
Confidence 456665543 2488999999999999999998875
No 45
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.46 E-value=9.5 Score=23.49 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=26.8
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
...|.|... ...+.|.|.++.+...|.+.|+..+
T Consensus 67 ~~~F~I~~~---~r~~~l~a~s~~e~~~Wi~al~~~~ 100 (114)
T 2da0_A 67 KKSFDLISH---NRTYHFQAEDEQDYVAWISVLTNSK 100 (114)
T ss_dssp SSCEEEEET---TEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcC---CcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 357888743 2458899999999999999998544
No 46
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.29 E-value=7.9 Score=24.14 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=27.1
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+..|.|.... ..+.|.|.++.+...|++.|+...
T Consensus 70 ~~~F~i~~~~---r~~~l~a~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 70 EGIFEIKTPS---RVITLKAATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp GCEEEEECSS---CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC---cEEEEECCCHHHHHHHHHHHHHHH
Confidence 4578876542 348899999999999999998665
No 47
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=68.03 E-value=8.2 Score=29.85 Aligned_cols=45 Identities=11% Similarity=0.162 Sum_probs=36.6
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCCCcHHHHH
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKMTSKEADN 53 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m~S~et~~ 53 (93)
+.+|.|.... ..+.|.|.++.+...|.+.|+..+.+.++.++.+.
T Consensus 338 ~~~F~I~t~~---rty~l~A~s~~e~~~Wi~aL~~~i~~p~~p~~~~~ 382 (386)
T 3lju_X 338 PHGITIVTPD---RKFLFACETESDQREWVAAFQKAVDRPMLPQEYAV 382 (386)
T ss_dssp CEEEEEECSS---CEEEEEESSHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred CcEEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHhccCCchHhhh
Confidence 3567776432 35899999999999999999999999988887654
No 48
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.82 E-value=10 Score=22.76 Aligned_cols=35 Identities=14% Similarity=0.290 Sum_probs=27.2
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|.... ..+.|.|.++.+...|.+.|+....
T Consensus 69 ~~~F~i~~~~---r~~~l~a~s~~e~~~Wi~ai~~~~~ 103 (115)
T 2dn6_A 69 KCLFLVKCFD---KTFEISASDKKKKQEWIQAIHSTIH 103 (115)
T ss_dssp CSEEEEECSS---CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeCC---CEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 3567775442 3488999999999999999987663
No 49
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=65.33 E-value=11 Score=24.15 Aligned_cols=35 Identities=6% Similarity=0.155 Sum_probs=27.2
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+..|.|....+ ..+-|.|.++++...|...|+..+
T Consensus 89 ~~~F~l~t~~~--~~yl~qA~s~~e~~~Wi~aI~~~i 123 (129)
T 2p0d_A 89 RNVLHIRTIPG--HEFLLQSDHETELRAWHRALRTVI 123 (129)
T ss_dssp SSEEEEECTTS--CEEEEECSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCC--CEEEEECCCHHHHHHHHHHHHHHH
Confidence 35788875543 337799999999999999998654
No 50
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=64.81 E-value=13 Score=24.33 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=29.6
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+..|.|.... . .+.|.|.++.+...|.+.|+.....
T Consensus 77 ~~~F~I~t~~--r-~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 77 KNVFRLTTSD--C-ECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp SSEEEEECSS--C-EEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred CCEEEEEeCC--c-eEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4578887554 2 4889999999999999999988874
No 51
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=64.44 E-value=11 Score=26.38 Aligned_cols=37 Identities=30% Similarity=0.438 Sum_probs=30.6
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHh
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINAL 41 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~L 41 (93)
-+.+|+|.....+...+.|.|.++++..+|+..|+--
T Consensus 110 ~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIrea 146 (150)
T 2fjl_A 110 RLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREV 146 (150)
T ss_dssp CSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHH
Confidence 4678999887664557999999999999999988643
No 52
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=62.98 E-value=11 Score=23.93 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=26.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINAL 41 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~L 41 (93)
+..|.|....+. ..-|-|.|+++...|...|+.-
T Consensus 88 k~vF~l~t~~~~--~ylfqA~s~~e~~~Wi~aI~~a 121 (124)
T 3pp2_A 88 KNVLELRSRDGS--EYLIQHDSEAIISTWHKAIAQG 121 (124)
T ss_dssp SSEEEEECTTSC--EEEEECSCHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCC--EEEEECCCHHHHHHHHHHHHHH
Confidence 456888765442 3679999999999999999854
No 53
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=61.16 E-value=29 Score=22.31 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=29.2
Q ss_pred cceeeEEecCCC---ceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVE---ITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e---~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+..|.|.++..+ ...+-|.|+++++-..|...|+..+
T Consensus 75 p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 75 PRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp GGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 456999986421 2469999999999999999888654
No 54
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=60.62 E-value=13 Score=23.09 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=20.3
Q ss_pred eEEEecCChhHHHHHHHHHHHhh
Q psy313 20 SLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 20 ~l~~va~~~~~~~~W~DGln~Ll 42 (93)
.+.|.|.++++...|.+.|+..+
T Consensus 105 ~~~l~A~s~~e~~~Wi~al~~~i 127 (134)
T 2y7b_A 105 KNWLSADTKEERDLWMQKLNQVL 127 (134)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHH
Confidence 48899999999999999998654
No 55
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=60.56 E-value=19 Score=23.23 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=25.5
Q ss_pred ceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 7 IAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 7 laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
.+|.| .... -..-|.|.++.+...|++.|+....
T Consensus 87 ~~F~i--~t~~-r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 87 FCFVI--NALS-QRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp SEEEE--ECSS-CEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEEEE--ECCC-EEEEEECCCHHHHHHHHHHHHHHHh
Confidence 46744 2322 3489999999999999999987654
No 56
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=60.55 E-value=15 Score=25.92 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=28.9
Q ss_pred CcceeeEEecCC---CceeEEEecCChhHHHHHHHHHHHhh
Q psy313 5 PDIAFSLTLDSV---EITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 5 ~~laFSl~~~~~---e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
.+.+|.|..... +.....|.|.|+.+...|+.+|+...
T Consensus 235 ~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 235 TDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp SSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 356788876432 22357899999999999999998764
No 57
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=59.82 E-value=14 Score=26.07 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=28.5
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+.+|.|..... ..+.|.|.++.+...|++.|+..+
T Consensus 173 ~~~F~I~t~~~--r~~~l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 173 DCCFEICAPDK--RIYQFTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp GGEEEEECSSS--CEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCC--CEEEEEcCCHHHHHHHHHHHHHHH
Confidence 46888877542 358999999999999999998765
No 58
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=59.80 E-value=17 Score=24.69 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=28.3
Q ss_pred ceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 7 IAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 7 laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
.+|.|.... . .+-|.|.++.+...|.+.|+..+.
T Consensus 99 ~~F~I~t~~--r-t~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 99 YPFQVVYDE--G-PLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp EEEEEEETT--C-CEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccEEEEeCC--c-eEEEEcCCHHHHHHHHHHHHHHHH
Confidence 678887654 2 377999999999999999998876
No 59
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=56.53 E-value=23 Score=22.64 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=27.7
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+.+|.|... . ..+-|.|.++++...|+.-|+...
T Consensus 72 ~~~Fki~~~--~-~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 72 GHVWKLQWA--K-QSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp SEEEEEEET--T-EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCEEEEecC--C-eEEEEEcCCHHHHHHHHHHHHHHh
Confidence 568998833 2 359999999999999999998743
No 60
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=56.15 E-value=18 Score=25.48 Aligned_cols=36 Identities=8% Similarity=0.269 Sum_probs=29.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
+..|.|.... ..+.|.|.++.+...|++.|+...+.
T Consensus 121 ~~~F~I~t~~---r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 121 ENGIDIIMAD---RTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp TSEEEEECSS---CEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEcCC---cEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 4568885532 35899999999999999999999974
No 61
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=48.05 E-value=44 Score=21.52 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=28.8
Q ss_pred CcceeeEEecCCC----ceeEEEecCChhHHHHHHHHHHHhh
Q psy313 5 PDIAFSLTLDSVE----ITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 5 ~~laFSl~~~~~e----~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
....|.|...... ...+-|.|.+.++...|+..|+.+.
T Consensus 76 ~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 76 SDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp -CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 4567888766521 1258999999999999999998765
No 62
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=48.04 E-value=28 Score=25.48 Aligned_cols=37 Identities=16% Similarity=0.216 Sum_probs=28.5
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNK 45 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~ 45 (93)
+.+|.|... + ..+.|.|.++.+...|.+.|+.+..+.
T Consensus 78 ~~~F~I~t~--~-rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 78 KHLVALYTR--D-EHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp SSEEEEEES--S-CEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred CcEEEEEEC--C-EEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 467888754 2 358899999999999999999988644
No 63
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=46.92 E-value=33 Score=23.06 Aligned_cols=51 Identities=16% Similarity=0.167 Sum_probs=35.7
Q ss_pred ceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCCC-----cHHHHHHHHHHHc
Q psy313 7 IAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKMT-----SKEADNDLETLLS 60 (93)
Q Consensus 7 laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m~-----S~et~~dv~~Ll~ 60 (93)
..|.|.... . .+.|.|.++++...|...|+........ -..-.-.++..|+
T Consensus 80 ~~F~I~t~~--r-~~~f~A~s~ee~~eWi~aI~~v~~~~~p~~~~l~p~~~~~~~~~l~ 135 (149)
T 1x1f_A 80 AKFTLVLPK--E-EVQLKTENTESGEEWRGFILTVTELSVPQNVSLLPGQVIKLHEVLE 135 (149)
T ss_dssp CEEEEECSS--C-CEEEECSSHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHH
T ss_pred cEEEEEcCC--C-EEEEEcCCHHHHHHHHHHHHHHHcccCCCccccCccchHHHHHHHH
Confidence 467776543 2 3789999999999999999988763332 3444555566665
No 64
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=45.45 E-value=39 Score=24.80 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=31.6
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCCC
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNKM 46 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~m 46 (93)
...+|.|....+ ..+.|.|+++++-..|.+.|+.+.-+.|
T Consensus 313 ~~~~F~i~~~~~--~~~~l~a~s~~ek~~W~~~i~~~~~~~~ 352 (354)
T 1dbh_A 313 YKHAFEIILKDE--NSVIFSAKSAEEKNNWMAALISLQYRST 352 (354)
T ss_dssp CCSEEEECCTTS--CCEEEECSSHHHHHHHHHHHHHHHTTTT
T ss_pred cCccEEEecCCC--CEEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 357888876542 3489999999999999999998876544
No 65
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=43.87 E-value=29 Score=25.38 Aligned_cols=36 Identities=17% Similarity=0.296 Sum_probs=28.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+..|.|....+ ..+.|.|.++.+...|.+.|+....
T Consensus 89 ~~~F~I~t~~~--r~y~f~A~s~ee~~~Wi~aI~~a~~ 124 (263)
T 3a8p_A 89 EHVFCLSNSCG--DVYLFQATSQTDLENWVTAIHSACA 124 (263)
T ss_dssp SSEEEEECTTS--CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCC--cEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 56788876443 3488999999999999999986653
No 66
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=40.19 E-value=4.2 Score=23.13 Aligned_cols=10 Identities=20% Similarity=0.215 Sum_probs=8.3
Q ss_pred HHHHHHHHHH
Q psy313 30 VFDYWTDGIN 39 (93)
Q Consensus 30 ~~~~W~DGln 39 (93)
=.++|+||+|
T Consensus 6 Y~SD~~dg~~ 15 (43)
T 1bzk_A 6 YLSDITDAFS 15 (43)
T ss_dssp THHHHTTSSC
T ss_pred cHHHHHHHhh
Confidence 3689999998
No 67
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=39.78 E-value=48 Score=24.90 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=30.2
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+.+|.|....++. .+.|.|+++++-..|.+-|+..+.
T Consensus 299 ~~~F~i~~~~~~~-~~~l~a~s~~ek~~W~~~i~~ai~ 335 (406)
T 2vrw_B 299 SHMFLLIEDQGAQ-GYELFFKTRELKKKWMEQFEMAIS 335 (406)
T ss_dssp CEEEEEEETTCSC-EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceeeEEEecCCCc-eEEEeCCCHHHHHHHHHHHHHHHh
Confidence 4789998765443 489999999999999999987664
No 68
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=39.42 E-value=12 Score=26.44 Aligned_cols=52 Identities=21% Similarity=0.362 Sum_probs=35.2
Q ss_pred HHhhCCCCCcHHHHHHHHHHHchhhhhhhcccCCCCCCC-CCCCCCCCCCCCCc
Q psy313 39 NALLGNKMTSKEADNDLETLLSMEIKIRLLDAEGVEIPH-HPPEVPEEPRNYDF 91 (93)
Q Consensus 39 n~Llg~~m~S~et~~dv~~Ll~melKlrLLdlegv~IP~-~~p~IPp~P~~~dF 91 (93)
.+++||.-.|.+.+.-+..+|.+.-.. +-.|..++.=. -+|.+|.+|.=|-|
T Consensus 45 aa~lGQ~~ls~e~A~kLa~~LgL~~e~-~~~l~~~P~rg~~~~~~ptdP~iYR~ 97 (156)
T 1dw9_A 45 AALLGQQALPADAARLVGAKLDLDEDS-ILLLQMIPLRGCIDDRIPTDPTMYRF 97 (156)
T ss_dssp HHHTTSSCCCHHHHHHHHHHTTCCHHH-HHHTTSBCCCCCCSSSSCCSHHHHHH
T ss_pred HHHcCCCCCCHHHHHHHHHHhCcCHHH-HHHHhcCCcCCCCCCCCCCCCeehhH
Confidence 467899999999999999998876655 33445444331 33667777754443
No 69
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=38.75 E-value=50 Score=24.47 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=30.8
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
.+.+|.|.....+ ..+.|.|+++++-..|.+.|+..+.
T Consensus 288 ~~~~F~i~~~~~~-~~~~l~a~s~~ek~~W~~~i~~ai~ 325 (353)
T 1kz7_A 288 DTKKFEIWYNARE-EVYIIQAPTPEIKAAWVNAIRKVLT 325 (353)
T ss_dssp BTTEEEEEETTTT-EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCC-cEEEEECCCHHHHHHHHHHHHHHHH
Confidence 3568998876543 4588999999999999999997764
No 70
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=36.08 E-value=67 Score=21.34 Aligned_cols=38 Identities=11% Similarity=0.030 Sum_probs=29.7
Q ss_pred CcceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 5 PDIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 5 ~~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
.+-+|.|..... ....-|-|.+++....|...|+.-..
T Consensus 75 ~~~~F~L~~~~~-G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 75 HPDIFQLNNPDK-GNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp STTEEEEECTTS-CSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeeCCC-CCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 356899985422 24599999999999999999987664
No 71
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=34.67 E-value=72 Score=24.01 Aligned_cols=40 Identities=15% Similarity=0.179 Sum_probs=30.9
Q ss_pred CcCcceeeEEecC---CCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 3 KIPDIAFSLTLDS---VEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 3 ~~~~laFSl~~~~---~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
-..+.+|.|-... ++..+--|+|.|+++...|+-+|+...
T Consensus 223 aPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 223 APTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp CSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 3457788887532 233468999999999999999999874
No 72
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=34.09 E-value=83 Score=21.09 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=29.5
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
..+|.+.... + + .-|.|.++++-..|+..|+--.|+
T Consensus 76 k~~F~~v~~~-~-t-y~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 76 RAFFNAVKEG-D-T-VIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp SSEEEEECSS-C-E-EEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEecCC-c-e-EEEEcCCHHHHHHHHHHHHHHhcc
Confidence 4688877543 3 3 789999999999999999998884
No 73
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=31.67 E-value=69 Score=23.35 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=28.4
Q ss_pred CcceeeEEecCC-CceeEEEecCChhHHHHHHHHHHHh
Q psy313 5 PDIAFSLTLDSV-EITSLDFVAPDEEVFDYWTDGINAL 41 (93)
Q Consensus 5 ~~laFSl~~~~~-e~~~l~~va~~~~~~~~W~DGln~L 41 (93)
...+|.|....+ ....+.|.|+++++-..|++-|+..
T Consensus 307 ~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~a 344 (346)
T 2z0q_A 307 VKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQA 344 (346)
T ss_dssp TSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred cccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHh
Confidence 356899987532 1245899999999999999998764
No 74
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=31.56 E-value=35 Score=25.73 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=28.3
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+.+|.|....+ ..+-|-|.|+.+...|...|+...
T Consensus 89 k~vF~L~t~~g--~~yLFQA~s~eEm~~WI~aI~~a~ 123 (279)
T 3a8n_A 89 DFVFCLSNSLG--DAFLFQTTSQTELENWITAIHSAC 123 (279)
T ss_dssp CSCCCEEETTT--EEEECCCSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCC--CEEEEeCCCHHHHHHHHHHHHHHH
Confidence 45788877654 347799999999999999998665
No 75
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=31.56 E-value=75 Score=24.00 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=29.7
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCC
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGN 44 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~ 44 (93)
...|.|...... ..+.|.|.++.+...|...|+....+
T Consensus 362 ~~cF~i~~~~~~-~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 362 RYCFQITTPNGK-SGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp SSEEEEECTTSS-CCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred CceEEEEecCCC-ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 357888765432 34889999999999999999877654
No 76
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=30.54 E-value=66 Score=24.18 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=23.3
Q ss_pred eeEEEecCChhHHHHHHHHHHHhhCCC
Q psy313 19 TSLDFVAPDEEVFDYWTDGINALLGNK 45 (93)
Q Consensus 19 ~~l~~va~~~~~~~~W~DGln~Llg~~ 45 (93)
..+.|.|.++++...|.+.|+....+.
T Consensus 304 r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 304 VVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 358899999999999999999877643
No 77
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=29.61 E-value=76 Score=23.46 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=30.3
Q ss_pred cCcceeeEEecCC---CceeEEEecCChhHHHHHHHHHHHhh
Q psy313 4 IPDIAFSLTLDSV---EITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 4 ~~~laFSl~~~~~---e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
..+..|.|-.... ++.+.-|+|.|+++...|+-+|+...
T Consensus 198 Pt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 198 PTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp SSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 4467888875532 23468999999999999999999865
No 78
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=26.49 E-value=1.1e+02 Score=22.00 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=28.8
Q ss_pred cceeeEEecC--CCceeEEEecCChhHHHHHHHHHHHhhC
Q psy313 6 DIAFSLTLDS--VEITSLDFVAPDEEVFDYWTDGINALLG 43 (93)
Q Consensus 6 ~laFSl~~~~--~e~~~l~~va~~~~~~~~W~DGln~Llg 43 (93)
+.+|.|.... +....+.|.|+++++-..|.+.|+..+.
T Consensus 269 ~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~ 308 (311)
T 1nty_A 269 PCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQ 308 (311)
T ss_dssp TTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHh
Confidence 4678888732 1122488999999999999999987754
No 79
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=25.63 E-value=87 Score=24.01 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=26.5
Q ss_pred cceeeEEecCCC-ceeEEEecCChhHHHHHHHHHHHh
Q psy313 6 DIAFSLTLDSVE-ITSLDFVAPDEEVFDYWTDGINAL 41 (93)
Q Consensus 6 ~laFSl~~~~~e-~~~l~~va~~~~~~~~W~DGln~L 41 (93)
+.+|.|.+..+. .-.+.|.|.|..+...|.+.|+.-
T Consensus 208 ~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a 244 (386)
T 3lju_X 208 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAA 244 (386)
T ss_dssp TTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhc
Confidence 446777654322 236889999999999999998764
No 80
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=25.54 E-value=1.1e+02 Score=22.66 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=29.6
Q ss_pred cceeeEEecCCC--ceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVE--ITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e--~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
+.+|.|.....+ ...+.|.|+++++-..|++-|+-.+
T Consensus 279 ~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 317 (354)
T 2rgn_B 279 PCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQIL 317 (354)
T ss_dssp TTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 468998875322 2468999999999999999998876
No 81
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=24.92 E-value=1.1e+02 Score=23.06 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=28.2
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINAL 41 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~L 41 (93)
..+|.|....++. .+.|.|+++++-..|.+.|+..
T Consensus 327 ~~~F~i~~~~~~~-~~~l~a~s~~eK~~Wi~~i~~a 361 (402)
T 2dfk_A 327 KNAFKLHNKETEE-VHLFFAKKLEEKIRWLRAFREE 361 (402)
T ss_dssp SSEEEEEESSSSC-EEEEECSSHHHHHHHHHHHHHH
T ss_pred ceeEEEEECCCCe-EEEEEeCCHHHHHHHHHHHHHH
Confidence 4688888765433 5889999999999999998764
No 82
>1wa7_B TIP, hypothetical 28.7 kDa protein in DHFR 3'region (ORF1); SH3 domain, ligand, tyrosine kinase, signal transduction, LYN; NMR {Saimiriine herpesvirus 2}
Probab=24.62 E-value=39 Score=17.39 Aligned_cols=11 Identities=36% Similarity=0.827 Sum_probs=8.1
Q ss_pred CCCCCCCCCCC
Q psy313 79 PPEVPEEPRNY 89 (93)
Q Consensus 79 ~p~IPp~P~~~ 89 (93)
+|+.||-|.|.
T Consensus 7 ~P~LPpRPaNL 17 (26)
T 1wa7_B 7 TPPLPPRPANL 17 (26)
T ss_dssp CCCCCCCTTST
T ss_pred CCCCCCCcccc
Confidence 47778888875
No 83
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=22.13 E-value=1.1e+02 Score=22.79 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=29.6
Q ss_pred ceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhhCCC
Q psy313 7 IAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALLGNK 45 (93)
Q Consensus 7 laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Llg~~ 45 (93)
..|.|....+. ..+.|.|.++.+...|...|+..+.+-
T Consensus 340 ~~F~i~t~~~~-~~~~l~A~s~~e~~~Wi~ai~~~~~~~ 377 (385)
T 2q13_A 340 YCFQITSFDGK-KSSILQAESKKDHEEWICTINNISKQI 377 (385)
T ss_dssp SEEEEECTTSC-BCCCEECSSHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEeCCCC-eEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 57888765532 348899999999999999999876543
No 84
>3um3_B Charged multivesicular BODY protein 4B; alpha-helix of C-terminal tail of CHMP4B, ESCRT-III, CHMPS, protein-transport protein complex, BROX; 3.80A {Homo sapiens}
Probab=20.78 E-value=1.8e+02 Score=18.88 Aligned_cols=49 Identities=22% Similarity=0.325 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhhCCCC------CcHHHHHHHHHHHchhhhhhhcccCC---CCCCCC
Q psy313 30 VFDYWTDGINALLGNKM------TSKEADNDLETLLSMEIKIRLLDAEG---VEIPHH 78 (93)
Q Consensus 30 ~~~~W~DGln~Llg~~m------~S~et~~dv~~Ll~melKlrLLdleg---v~IP~~ 78 (93)
......+-|+-.+++.+ --.+-..+++.|..=++.=+||+..+ +.+|+-
T Consensus 17 E~~e~~~EI~e~Ls~~~~~~~~~DEdELe~ELe~Le~e~l~~~~l~~~~~~~~~LP~v 74 (104)
T 3um3_B 17 DQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNLLEISGPETVPLPNV 74 (104)
T ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Confidence 44567778888887654 34577888999999899999998865 445543
No 85
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=20.40 E-value=1.3e+02 Score=22.95 Aligned_cols=36 Identities=17% Similarity=0.094 Sum_probs=28.5
Q ss_pred cceeeEEecCCCceeEEEecCChhHHHHHHHHHHHhh
Q psy313 6 DIAFSLTLDSVEITSLDFVAPDEEVFDYWTDGINALL 42 (93)
Q Consensus 6 ~laFSl~~~~~e~~~l~~va~~~~~~~~W~DGln~Ll 42 (93)
..+|.|.....+. .+.|.|+++++-..|.+.|+...
T Consensus 404 ~~~F~i~~~~~~~-~~~l~a~s~~eK~~W~~~i~~a~ 439 (466)
T 2pz1_A 404 KNAFRLHRGATGD-SHLLCTRKPEQKQRWLKAFARER 439 (466)
T ss_dssp CEEEEEECSSSCC-EEEEEESSHHHHHHHHHHHHHHH
T ss_pred ceeEEEEeCCCCe-EEEEEeCCHHHHHHHHHHHHHHH
Confidence 4678888765433 58899999999999999887754
Done!