BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3132
(507 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/477 (49%), Positives = 327/477 (68%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 13 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 72
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 132
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 133 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 192
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 193 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 252
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 253 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 312
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 313 AEAMKKNLRVGNGFE-EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 370
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 431 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 487
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/477 (49%), Positives = 326/477 (68%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 13 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 72
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 132
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 133 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 192
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 193 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 252
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ V +N+FL+Q + D FV+
Sbjct: 253 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFVKAF 312
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 313 AEAMKKNLRVGNGFE-EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 370
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 431 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 487
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/476 (46%), Positives = 307/476 (64%), Gaps = 8/476 (1%)
Query: 31 QAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
QA INGEW+ ++ + V NPAN + L VP MG ++ + AI +A A W T KE
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKE 70
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+ W + ++ LA +MT E GKP E+ GE+ YA SF++WF+EE +R YG+ +
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI 130
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P K L+++++P+GV ITPWNFP AMITRK PALAAGCT V+K
Sbjct: 131 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+P GV NVVT S A +VG L ++P V +SFTGST++G+ L C++
Sbjct: 191 LAELAIRAGVPAGVFNVVTGS---AGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
IK++SLELGGNAPFIV+ +A+L KAV GA+A+KFRN GQ CV ANR +Q+ V+D+F E
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L+ ++K I GD N +GPLI+ V KV+ + DA+ KGA+V+ GGK + G
Sbjct: 308 LQQAMSKLHI-GDGLDN-GVTIGPLIDEKAVAKVEEHIADALEKGARVVC-GGKAHERGG 364
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
FF PTIL ++ + EE FGP+A +FK E + + AN++ GLA YF+ D+S+
Sbjct: 365 NFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSR 424
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+RVG+ L+ G+VGIN GIIS+ A FGG+K SGLGREGS++G+E++ +IKYMC G
Sbjct: 425 VFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/476 (46%), Positives = 307/476 (64%), Gaps = 8/476 (1%)
Query: 31 QAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
QA INGEW+ ++ + V NPAN + L VP MG ++ + AI +A A W T KE
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKE 70
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+ W + ++ LA +MT E GKP E+ GE+ YA SF++WF+EE +R YG+ +
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI 130
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P K L+++++P+GV ITPWNFP AMITRK PALAAGCT V+K
Sbjct: 131 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+P GV NVVT S A +VG L ++P V +SFTGST++G+ L C++
Sbjct: 191 LAELAIRAGVPAGVFNVVTGS---AGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 247
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
IK++SLELGGNAPFIV+ +A+L KAV GA+A+KFRN GQ CV ANR +Q+ V+D+F E
Sbjct: 248 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L+ ++K I GD N +GPLI+ V KV+ + DA+ KGA+V+ GGK + G
Sbjct: 308 LQQAMSKLHI-GDGLDN-GVTIGPLIDEKAVAKVEEHIADALEKGARVVC-GGKAHERGG 364
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
FF PTIL ++ + EE FGP+A +FK E + + AN++ GLA YF+ D+S+
Sbjct: 365 NFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSR 424
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+RVG+ L+ G+VGIN GIIS+ A FGG+K SGLGREGS++G+E++ +IKYMC G
Sbjct: 425 VFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/474 (45%), Positives = 303/474 (63%), Gaps = 8/474 (1%)
Query: 31 QAYINGEW--VHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
QAYI GEW S F V++PA E L VP MG + AI +A+ A+ W T KE
Sbjct: 14 QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKE 73
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+RW + N LA I+T E GKP E+ GE+ YA SF++WF+EE +R G+ +
Sbjct: 74 RAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTL 133
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P+P +K +++V+EP+GV ITPWNFP AMI RKV PALAAGC V+K
Sbjct: 134 PTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALA 193
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+PKGVL+VV + ++G + ++P V +SFTGST VG++L + +
Sbjct: 194 MAFLAERAGVPKGVLSVVIG---DPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPT 250
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K+L+LELGGNAPFIV+ +A+L AV GA+A+K+RN GQ CV NRF + E+V+D F +
Sbjct: 251 VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADK 310
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L ++K + T LGPLIN A V+KV+S + DA++KGA ++ GGK LG
Sbjct: 311 LAAAVSKLKVGRGTESG--ATLGPLINEAAVKKVESHIADALAKGAS-LMTGGKRHALGH 367
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
FF PT+LT + PDM EE FGP+A +F +EEE + +AN++ GLA Y ++ DI +
Sbjct: 368 GFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGR 427
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
WRV + L+ GMVGIN G+IS+ A FGGVK+SGLGREGS +G++++ IKY+C
Sbjct: 428 VWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/475 (45%), Positives = 301/475 (63%), Gaps = 10/475 (2%)
Query: 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
+Q +NG W+ ++ V NPA+ + VP + V ++ AI ++ +A W+ T K
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAK 92
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER +L++W + N +A IMT E GKP E+ GEV+YA SF++WF+EEA+R YG+
Sbjct: 93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDT 152
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
+P+P + L ++R+P+GV ITPWNFP AMITRK APALAAGCT +++
Sbjct: 153 IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212
Query: 208 XXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
IP GVL +VT A +G L ++ V +SFTGST+VG++L + C+
Sbjct: 213 ALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
IKR+SLELGGNAPFIV+ +A+L AV GAM +K+RN GQ CV ANR +Q V+D+F E
Sbjct: 270 TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAE 329
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L ++ + + T +GP+I + KV + ++DA+SKGAK+I GG +LG
Sbjct: 330 KLAAKVKELKVGNGTEPG--VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG---KELG 384
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
FF P ILT +T DML EE FGP+A F TEEE + AN++ GLA YF+T + S
Sbjct: 385 GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFS 444
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
+A RV + L+ GMVG N G+IS+ A FGGVK+SGLGREGS++G+EE+ + KY+C
Sbjct: 445 RAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYIC 499
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 258/482 (53%), Gaps = 15/482 (3%)
Query: 32 AYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
YI G W S+ F VYNPA +A VP EDV A+ + + A + + P E
Sbjct: 14 GYIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSAL-RLTNPWPIE- 71
Query: 90 GIVLKRWLKE----LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG 145
++WL++ L+ N++ + I+ E GKP E+ GEV YA F D+ ++
Sbjct: 72 --TRRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXX 205
+P K + P+GV GLI PWNFP+ I +K++ ALAAGC VIK
Sbjct: 130 HTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLT 189
Query: 206 XXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
+P G +N+V A+ +GK+LC V +SFTGST+VG+ L
Sbjct: 190 XIAFFSVXDKLDLPDGXVNLVXG---KASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDT 246
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
++ +K+L+LELGGNAPFIV+ +A+L+ A +A KFR GQ CV ANR + E+V D F
Sbjct: 247 AEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAF 306
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
+ L + K + GD ND ++GPLIN +KV +QDA+ KGA ++ G
Sbjct: 307 GQKLAERVNKXTV-GD-GXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAEL 364
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
FF PT++ + + CY EE FGP+ F+TEEE + N++ GLA Y FT D
Sbjct: 365 GDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTAD 424
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505
+A RV L+ G VG N G EA FGG K SG+GREG G+ EF + + + G
Sbjct: 425 AERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGXKASGIGREGGLEGLFEFVEAQTVPRGF 484
Query: 506 LE 507
E
Sbjct: 485 AE 486
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 288 bits (736), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 272/478 (56%), Gaps = 15/478 (3%)
Query: 31 QAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTP 86
Q +I+GEW KK PV NP+ +E + D+P EDV+ A+++A+ AF + WS T+
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE 146
R L+ ++ K ++ T +SGKP E++ ++ S ++F+ +A G+
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEALDGK 128
Query: 147 L---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
V P++ + ++R+PLGVVGLI+PWN+P+ M T K+APALAAGCT V+K
Sbjct: 129 QKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELAS 188
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
+P GVLN++T +A G L + P V I+FTGS+ G + +
Sbjct: 189 VTCLEFGEVCNEVGLPPGVLNILTGLGPDA---GAPLVSHPDVDKIAFTGSSATGSKVMA 245
Query: 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
+Q +K ++LELGG +P +V+ + ++ K V + F GQ C A +R L+ E +
Sbjct: 246 SAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAA 305
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+FV+ L V+ TK+ D + + C LGP+I+ Q +K+ + A S+GA ++ GG +
Sbjct: 306 EFVDKL-VKWTKNIKISDPFE-EGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRP 363
Query: 384 TKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIK-FKTEEESLCVANNSNTGLAGYF 441
L ++ PTI+T+I+ M + EEVFGPV +C+K F +E+E++ +AN++ GLA
Sbjct: 364 EHLKKGYYIEPTIVTDISTSMQIWKEEVFGPV-LCVKTFSSEDEAIALANDTEYGLAAAV 422
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
F+ND+ + R+ K L+VG V +N +A +GG+K SG GRE G++ + IK
Sbjct: 423 FSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIK 480
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 274/492 (55%), Gaps = 16/492 (3%)
Query: 18 MKYLQKLCLSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAK 75
M+ L+ L + YI+GEWV S+ K + NP N E + V + ED + AI++A+
Sbjct: 25 MELLKHLS----QRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAAR 80
Query: 76 EAFE--QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFV 133
AFE +WSQ T + RG ++ +++ +++ALA + T ++GK ES ++ ++
Sbjct: 81 RAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVF 140
Query: 134 DWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCT 193
+F+ A + GE++ SP+ E +V+EP+GVV ITPWN+P+ + K+APALA GC+
Sbjct: 141 MYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCS 200
Query: 194 CVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTG 253
V+K PKG +N++ + + VG ++ V +SFTG
Sbjct: 201 LVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGA---GSEVGDVMSGHKEVDLVSFTG 257
Query: 254 STQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAAN 313
+ GK + + + + ++LELGG P I++ +A+ + AV A+ + + GQ C A +
Sbjct: 258 GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGS 317
Query: 314 RFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKG 373
R L+Q + D+F + L ++ K G+ D +GP+I+ K++S + A ++G
Sbjct: 318 RILVQNSIKDKFEQAL-IDRVKKIKLGNGFDAD-TEMGPVISTEHRNKIESYMDVAKAEG 375
Query: 374 AKVILGGGKVTKLGSK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVA 430
A + +GG + + K FF PT++TN M EEVFGPV F+TE+E++ +A
Sbjct: 376 ATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLA 435
Query: 431 NNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRH 490
N+S GLAG F+ DI +A RV KL++G V IN+ +A +GG K+SG+GRE +
Sbjct: 436 NDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKE 495
Query: 491 GMEEFTQIKYMC 502
G+EE+ K++
Sbjct: 496 GLEEYLVSKHIL 507
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 253/484 (52%), Gaps = 26/484 (5%)
Query: 29 YTQAYINGEWVHSS---KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWS 82
YT+ +IN EW HSS KKFPV+NPA +E L +V + EDV A+ +A++AF+ W
Sbjct: 20 YTKIFINNEW-HSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWR 78
Query: 83 QTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES----LGEVVYANSF-VDWFS 137
ERG +L + +E ++ LA + GK + + LG + + W
Sbjct: 79 TMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWAD 138
Query: 138 EEARRTYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVI 196
+ RT P+ R EP+GV G I PWNFP+ M K+ PAL+ G T V+
Sbjct: 139 KIQGRTI------PMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVV 192
Query: 197 KXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQ 256
K P GV+N+V A G + + V ++FTGST+
Sbjct: 193 KPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTA---GAAISSHMDVDKVAFTGSTE 249
Query: 257 VGKILYSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRF 315
VGK++ + +KR+SLELGG +P IV+++A+L AV A F + GQ C+AA+R
Sbjct: 250 VGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL 309
Query: 316 LIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAK 375
++E ++D+FV VE K ++ G+ + GP I+ Q EK+ +++ +GAK
Sbjct: 310 FVEESIYDEFVRR-SVERAKKYVLGN-PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAK 367
Query: 376 VILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNT 435
+ GGG G F PT+ +++T DM EE+FGPV +KFK+ ++ + ANN+
Sbjct: 368 LECGGGPWGNKGY-FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFY 426
Query: 436 GLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
GL+ FTNDI +A V LQ G V +N + + FGG K SG GRE +G E+
Sbjct: 427 GLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEY 486
Query: 496 TQIK 499
T++K
Sbjct: 487 TEVK 490
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 253/483 (52%), Gaps = 24/483 (4%)
Query: 29 YTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ---WSQ 83
YT+ +IN EW +S + FPV NPA E + +V + D+ A+ +A+ AF W +
Sbjct: 18 YTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRR 77
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-----GEVVYANSFVDWFSE 138
ERG +L + +E ++ LA + + GKP ++ G + + W
Sbjct: 78 MDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGW--- 134
Query: 139 EARRTYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIK 197
A + +G +P V R EP+GV G I PWNFP+ M T K+APAL G T VIK
Sbjct: 135 -ADKIHGMTIP--VDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIK 191
Query: 198 XXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257
P GV+N++ A G + + + I+FTGST+V
Sbjct: 192 PAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTA---GAAIASHIGIDKIAFTGSTEV 248
Query: 258 GKILYSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL 316
GK++ + +KR++LELGG +P I++++A+L AV A F N GQ C A +R
Sbjct: 249 GKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIF 308
Query: 317 IQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376
++E ++++FV+ VE K I G + + GP I+ Q K+ ++Q +++GAK+
Sbjct: 309 VEESIYEEFVKR-SVERAKRRIVG-SPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKL 366
Query: 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
GG + + G F PT+ +N+T DM EE+FGPV ++FKT +E + ANNS+ G
Sbjct: 367 ECGGKGLGRKGF-FIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFG 425
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496
L FTNDI++A V +Q G V IN + ++ FGG K SG GRE G+ E++
Sbjct: 426 LVAAVFTNDINKALMVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGEFGLREYS 485
Query: 497 QIK 499
++K
Sbjct: 486 EVK 488
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 256/479 (53%), Gaps = 16/479 (3%)
Query: 29 YTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ---WSQ 83
+T+ +IN EW S K FPV+NPA +E + +V + EDV A+ +A+EAF+ W
Sbjct: 20 HTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRT 79
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESLGEVVYANSFVDWFSEEARR 142
ERG ++ + +E ++ LA + + +GK + L ++ Y + + + A +
Sbjct: 80 MDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADK 139
Query: 143 TYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXX 201
G +P V + R EP+GV GLI PWN PM ++ K+ PAL G T ++K
Sbjct: 140 IQGRTIP--VDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQ 197
Query: 202 XXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261
P GV+N+V A G + + V ++FTGST+VGK++
Sbjct: 198 TPLTALHVASLIKEAGFPPGVVNIVPGYGPTA---GAAISSHMDVDKVAFTGSTEVGKMI 254
Query: 262 YSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
++ +KR++LELG P IV+++A+L AV A F N GQ+C+AA++ ++E
Sbjct: 255 QEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEA 314
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
++D+FV+ VE K ++ G+ N GP IN AQ K+ +++ +GAK+ GG
Sbjct: 315 IYDEFVQR-SVERAKKYVFGN-PLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGG 372
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
G G F PT+ +N+T DM EE+FGPV +KFK+ +E + ANN+ GL
Sbjct: 373 GPWGNKGY-FIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAG 431
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT D+ +A V LQ G V +N + + ++ GG K SG GRE +G+ E+T++K
Sbjct: 432 VFTKDLDKAVTVSSALQAGTVWVNCYLAASAQSPAGGFKMSGHGREMGEYGIHEYTEVK 490
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 250/473 (52%), Gaps = 9/473 (1%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI+G++V V NPA + ++ +PD ED + AI +A+ A +W ER
Sbjct: 10 YIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
L++ + ++ ++ +E GK + EV + ++D+ +E ARR GE++ S
Sbjct: 70 SWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXX 210
+ +L+ + LGV I PWNFP +I RK+APAL G T VIK
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 211 XXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
+P+GV N+V +VG+ L +P VA +S TGS G+ + + ++ I
Sbjct: 190 KIVDEIGLPRGVFNLVLG---RGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT 246
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
++ LELGG AP IV +A+L+ AV + ++ N GQ C A R +Q+ ++DQFV L
Sbjct: 247 KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLG 306
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
E ++ G+ ++ + +GPLIN A +E+V+ V A+ +GA+V LGG V G +
Sbjct: 307 -EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY-Y 364
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
+ PT+L ++ +M EE FGPV + F T EE++ +AN+S+ GL +T +++ A
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 451 RVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF--TQIKYM 501
+ K L+ G IN + G ++SG+G +HG+ E+ TQ+ Y+
Sbjct: 425 KAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 244/486 (50%), Gaps = 30/486 (6%)
Query: 29 YTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTP 86
YT+ YINGEWV +S++ V NPA +E + V DV A+ +A + + ++ T+
Sbjct: 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSV 66
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES--------LGEVVYANSFVDWFSE 138
KER +L + +KE E K + + +T E G P + S L V A +D +
Sbjct: 67 KERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFVAARDALDNYEF 126
Query: 139 EARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKX 198
E RR + L+V+E +GV GLITPWNFP + K+A A AAG V+K
Sbjct: 127 EERRG------------DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKP 174
Query: 199 XXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258
+PKGV N+V + VG L P V SFTGS G
Sbjct: 175 SEETPFAAVILAEIFDKVGVPKGVFNLVNG---DGAGVGNPLSEHPKVRXXSFTGSGPTG 231
Query: 259 KILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
+ ++ K++SLELGG +P+IV + ++++A N GQ C A R L+
Sbjct: 232 SKIXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVP 291
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378
++ D F+ LK + ++ ++ + D +GP+I+ Q ++V + + I +GA++
Sbjct: 292 NKIKDAFLAELKEQFSQ--VRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFY 349
Query: 379 GG-GKVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
GG GK L +FA PTI N+ EE+FGPV I + +E++ +AN++ G
Sbjct: 350 GGPGKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYG 409
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496
LAGY D +V + ++ G V INE + FGG K+SGLGRE +G+EEF
Sbjct: 410 LAGYVIGKDKETLHKVARSIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEFL 468
Query: 497 QIKYMC 502
++K +
Sbjct: 469 EVKSIA 474
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 249/473 (52%), Gaps = 9/473 (1%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI+G++V V NPA + ++ +PD ED + AI +A+ A +W ER
Sbjct: 10 YIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
L++ + ++ ++ +E GK + EV + ++D+ +E ARR GE++ S
Sbjct: 70 SWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXX 210
+ +L+ + LGV I PWNFP +I RK+APAL G T VIK
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 211 XXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
+P+GV N+V +VG+ L +P VA +S TGS G+ + + ++ I
Sbjct: 190 KIVDEIGLPRGVFNLVLG---RGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT 246
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
++ LELGG AP IV +A+L+ AV + ++ N GQ C A R +Q+ ++DQFV L
Sbjct: 247 KVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLG 306
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
E ++ G+ ++ + +GPLIN A +E+V+ V A+ +GA+V GG V G +
Sbjct: 307 -EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY-Y 364
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
+ PT+L ++ +M EE FGPV + F T E+++ +AN+S+ GL +T +++ A
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 451 RVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF--TQIKYM 501
+ K L+ G IN + G ++SG+G +HG+ E+ TQ+ Y+
Sbjct: 425 KAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 261/496 (52%), Gaps = 17/496 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
K + KL L Q +I GE+V + SK + NP + + V V DV A+ +AKE
Sbjct: 26 KAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 77 AFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV 133
AFE W + ++RG +L R +E +++ LA I ++G T +L V +
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 134 DWFSEEARRTYGELVP--SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
+F+ + G +P ++ L L +EP+GV G++ PWN+P+ M++ K A LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 191 GCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
G T VIK IPKGV+N++ S + VG+ L P V I
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIG 262
Query: 251 FTGSTQVGKILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
FTGST+VGK + C+ +K++SLELGG +P I++++ +L KAV M++ F N G+ C
Sbjct: 263 FTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENC 322
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDA 369
+AA R ++E + +QFV+ + E+ K I G+ + D N GP + A + K+ Q
Sbjct: 323 IAAGRLFVEESIHNQFVQKVVEEVEKMKI-GNPLERD-TNHGPQNHEAHLRKLVEYCQRG 380
Query: 370 ISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES--L 427
+ +GA ++ GG +V + G FF PT+ T++ M EE FGP+ + +F + L
Sbjct: 381 VKEGATLVCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
AN + GLA FT DI++A V KLQ G V IN + A FGG K+SG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 488 SRHGMEEFTQIKYMCF 503
+ E+ +IK + F
Sbjct: 500 GEAALNEYLRIKTVTF 515
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 249/473 (52%), Gaps = 9/473 (1%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI+G++V V NPA + ++ +PD ED + AI +A+ A +W ER
Sbjct: 10 YIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA 69
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
L++ + ++ ++ +E GK + EV + ++D+ +E ARR GE++ S
Sbjct: 70 SWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQS 129
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXX 210
+ +L+ + LGV I PWNFP +I RK+APAL G T VIK
Sbjct: 130 DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFA 189
Query: 211 XXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
+P+GV N+V +VG+ L +P VA +S TGS G+ + + ++ I
Sbjct: 190 KIVDEIGLPRGVFNLVLG---RGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT 246
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
++ LELGG AP IV +A+L+ AV + ++ N GQ C A R +Q+ ++DQFV L
Sbjct: 247 KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLG 306
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
E ++ G+ ++ + +GPLIN A +E+V+ V A+ +GA+V GG V G +
Sbjct: 307 -EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY-Y 364
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
+ PT+L ++ +M EE FGPV + F T E+++ +AN+S+ GL +T +++ A
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAM 424
Query: 451 RVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF--TQIKYM 501
+ K L+ G IN + G ++SG+G +HG+ E+ TQ+ Y+
Sbjct: 425 KAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 255 bits (651), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 261/496 (52%), Gaps = 17/496 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
K + KL L Q +I GE+V + SK + NP + + V V DV A+ +AKE
Sbjct: 26 KAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 77 AFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV 133
AFE W + ++RG +L R +E +++ LA I ++G T +L V +
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 134 DWFSEEARRTYGELVP--SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
+F+ + G +P ++ L L +EP+GV G++ PWN+P+ M++ K A LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 191 GCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
G T VIK IPKGV+N++ S + VG+ L P V I
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIG 262
Query: 251 FTGSTQVGKILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
FTGST+VGK + C+ +K++SL+LGG +P I++++ +L KAV M++ F N G+ C
Sbjct: 263 FTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENC 322
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDA 369
+AA R ++E + +QFV+ + E+ K I G+ + D N GP + A + K+ Q
Sbjct: 323 IAAGRLFVEESIHNQFVQKVVEEVEKMKI-GNPLERD-TNHGPQNHEAHLRKLVEYCQRG 380
Query: 370 ISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES--L 427
+ +GA ++ GG +V + G FF PT+ T++ M EE FGP+ + +F + L
Sbjct: 381 VKEGATLVCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
AN + GLA FT DI++A V KLQ G V IN + A FGG K+SG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 488 SRHGMEEFTQIKYMCF 503
+ E+ +IK + F
Sbjct: 500 GEAALNEYLRIKTVTF 515
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 260/496 (52%), Gaps = 17/496 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
K + KL L Q +I GE+V + SK + NP + + V V DV A+ +AKE
Sbjct: 26 KAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 77 AFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV 133
AFE W + ++RG +L R +E +++ LA I ++G T +L V +
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 134 DWFSEEARRTYGELVP--SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
+F+ + G +P ++ L L +EP+GV G++ PWN+P+ M++ K A LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 191 GCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
G T VIK IPKGV+N++ S + VG+ L P V I
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIG 262
Query: 251 FTGSTQVGKILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
FTGST+VGK + C+ +K++SL LGG +P I++++ +L KAV M++ F N G+ C
Sbjct: 263 FTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENC 322
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDA 369
+AA R ++E + +QFV+ + E+ K I G+ + D N GP + A + K+ Q
Sbjct: 323 IAAGRLFVEESIHNQFVQKVVEEVEKMKI-GNPLERD-TNHGPQNHEAHLRKLVEYCQRG 380
Query: 370 ISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES--L 427
+ +GA ++ GG +V + G FF PT+ T++ M EE FGP+ + +F + L
Sbjct: 381 VKEGATLVCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
AN + GLA FT DI++A V KLQ G V IN + A FGG K+SG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 488 SRHGMEEFTQIKYMCF 503
+ E+ +IK + F
Sbjct: 500 GEAALNEYLRIKTVTF 515
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 260/496 (52%), Gaps = 17/496 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
K + KL L Q +I GE+V + SK + NP + + V V DV A+ +AKE
Sbjct: 26 KAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 77 AFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV 133
AFE W + ++RG +L R +E +++ LA I ++G T +L V +
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 134 DWFSEEARRTYGELVP--SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
+F+ + G +P ++ L L +EP+GV G++ PWN+P+ M++ K A LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 191 GCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
G T VIK IPKGV+N++ S + VG+ L P V I
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIG 262
Query: 251 FTGSTQVGKILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
FTGST+VGK + C+ +K++SLELGG +P I++++ +L KAV M++ F N G+
Sbjct: 263 FTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENA 322
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDA 369
+AA R ++E + +QFV+ + E+ K I G+ + D N GP + A + K+ Q
Sbjct: 323 IAAGRLFVEESIHNQFVQKVVEEVEKMKI-GNPLERD-TNHGPQNHEAHLRKLVEYCQRG 380
Query: 370 ISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES--L 427
+ +GA ++ GG +V + G FF PT+ T++ M EE FGP+ + +F + L
Sbjct: 381 VKEGATLVCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
AN + GLA FT DI++A V KLQ G V IN + A FGG K+SG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 488 SRHGMEEFTQIKYMCF 503
+ E+ +IK + F
Sbjct: 500 GEAALNEYLRIKTVTF 515
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 260/496 (52%), Gaps = 17/496 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
K + KL L Q +I GE+V + SK + NP + + V V DV A+ +AKE
Sbjct: 26 KAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 77 AFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV 133
AFE W + ++RG +L R +E +++ LA I ++G T +L V +
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 134 DWFSEEARRTYGELVP--SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
+F+ + G +P ++ L L +EP+GV G++ PWN+P+ M++ K A LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 191 GCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
G T VIK IPKGV+N++ S + VG+ L P V I
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIG 262
Query: 251 FTGSTQVGKILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
FTGST+VGK + C+ +K++SLELGG +P I++++ +L KAV M++ F N G+
Sbjct: 263 FTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENS 322
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDA 369
+AA R ++E + +QFV+ + E+ K I G+ + D N GP + A + K+ Q
Sbjct: 323 IAAGRLFVEESIHNQFVQKVVEEVEKMKI-GNPLERD-TNHGPQNHEAHLRKLVEYCQRG 380
Query: 370 ISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES--L 427
+ +GA ++ GG +V + G FF PT+ T++ M EE FGP+ + +F + L
Sbjct: 381 VKEGATLVCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
AN + GLA FT DI++A V KLQ G V IN + A FGG K+SG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 488 SRHGMEEFTQIKYMCF 503
+ E+ +IK + F
Sbjct: 500 GEAALNEYLRIKTVTF 515
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 262/481 (54%), Gaps = 18/481 (3%)
Query: 31 QAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-----WSQ 83
Q +ING+W +K+ PV NPA + D+P EDV A+ +AK A + W+
Sbjct: 9 QLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWAT 68
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRT 143
+ R L+ ++ K LA++ + + GKP E+ ++ +++++ A +
Sbjct: 69 ASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKL 128
Query: 144 YGEL---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXX 200
V P+ + + ++REP+GVVGLITPWN+PM M T KVAPALAAGC ++K
Sbjct: 129 DARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSE 188
Query: 201 XXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+P GVLN++T A G L T P V ++FTGS+ G
Sbjct: 189 LASLTCLELGEICKEVGLPPGVLNILTGLGPEA---GAPLATHPDVDKVAFTGSSATGSK 245
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ + +Q +K +SLELGG +P +V+ + +L KA A+ F GQ C A +R ++ E
Sbjct: 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHES 305
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+ +F+ + V+ K+ D + + C LGP+++ Q EK+ V +A S+GA ++ GG
Sbjct: 306 IATEFLNRI-VKWIKNIKISDPLE-EGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGG 363
Query: 381 GKVTKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIK-FKTEEESLCVANNSNTGLA 438
+ L FF PTI+T++T +M + EEVFGPV +C+K F TEEE++ +AN++ GL
Sbjct: 364 SRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPV-LCVKTFSTEEEAIDLANDTVYGLG 422
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498
+ND+ + RV K + G+V +N T+A +GGVK SG GRE G++ + +
Sbjct: 423 AAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482
Query: 499 K 499
K
Sbjct: 483 K 483
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 244/472 (51%), Gaps = 12/472 (2%)
Query: 34 INGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
INGE V +K PVYNPA + L ++ + E V A+ +A AF +W QTTPK R
Sbjct: 28 INGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAEC 87
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVD---WFSEEARRTYGELVP 149
L + +E N Q AE+ ++ GKP + + + A VD +F+ AR G
Sbjct: 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPA--IVDVFRFFAGAARCLNGLAAG 145
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
++ ++ R+PLGVV I PWN+P+ M K+APALAAG CV+
Sbjct: 146 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAG-NCVVLKPSEITPLTALK 204
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
P GV+N++ +VG L P V +S TGS G+ + SH + I
Sbjct: 205 LAELAKDIFPAGVVNILFG---RGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI 261
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR +ELGG AP IV+ +A+++ V G + N GQ C AA R Q+ ++D VE L
Sbjct: 262 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL 321
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ + ++ ++ LGPL +LA +E+V V++A + G ++ GG+ K
Sbjct: 322 GAAV--ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY 379
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
++APT+L D +EVFGPV F EE+ + AN+S GLA +T D+ +A
Sbjct: 380 YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRA 439
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
RV +LQ G +N + +E GG K SG G++ S +G+E++T ++++
Sbjct: 440 HRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 256/482 (53%), Gaps = 22/482 (4%)
Query: 31 QAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTTP 86
Q YI GEW KK P+ NPA +E + D+P EDV A+ +A++A + W TT
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFS------EEA 140
+R L+ ++ K LA + + +SGK ES ++ ++++ +
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSR 144
Query: 141 RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXX 200
R T L KS ++REPLGVVGLITPWN+P+ M KVAPALAAGC ++K
Sbjct: 145 RMTPVNLNSDSYKS---YVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 201 XXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+P G LN++T A G L + PHV ISFTGS G
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEA---GGPLASHPHVDKISFTGSGPTGSK 258
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSN-ANLQKAVSGAMAAKFRNCGQACVAANRFLIQE 319
+ + +Q +K +SLELGG +P +V+ + NL A + F N GQ C A +R ++QE
Sbjct: 259 IMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQE 318
Query: 320 QVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379
+ F++ L ++ TK+ D + D C LGP+++ Q EKV + +A S+GA ++ G
Sbjct: 319 NIASAFMDRL-LKWTKNIKISDPLEED-CKLGPVVSAGQYEKVLKFISNAKSEGATILCG 376
Query: 380 GGKVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIK-FKTEEESLCVANNSNTGL 437
G + L ++ PTI+T++ M + EEVFGPV +C+K FKTEE+++ +AN++ GL
Sbjct: 377 GERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPV-LCVKTFKTEEQAIELANDTKYGL 435
Query: 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497
+ D+ + R K Q G++ IN + E +GG K SG GR+ + G+E F
Sbjct: 436 GAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLN 495
Query: 498 IK 499
IK
Sbjct: 496 IK 497
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 234/459 (50%), Gaps = 12/459 (2%)
Query: 46 PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105
PV+ PA L + G E+V A+ SA+ A+ +WS+ ER V+ + + +
Sbjct: 39 PVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98
Query: 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLG 165
+A++ +GK TE+ ++ A +++++ A G+ + P + REPLG
Sbjct: 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTR-REPLG 157
Query: 166 VVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNV 225
V I WN+P + K APALA G V K +P G++NV
Sbjct: 158 VCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNV 217
Query: 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285
V G LLC P+VA +SFTGS GK + ++ +K ++LELGG +P +++
Sbjct: 218 VQ----GGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIF 273
Query: 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345
+ L+ AV GA+ A F GQ C R +Q ++ QF+E + V+ TK+ + GD
Sbjct: 274 KDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV-VKRTKAIVVGDPLLT 332
Query: 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK-----FFAPTILTNIT 400
+ +G LI+ Q++KV V A +GA+V+ GG +T K F +P +L N
Sbjct: 333 ET-RMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCR 391
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
DM C EE+FGPV + F TEEE L ANN+ GLA FT DIS+A RV L+ G
Sbjct: 392 DDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451
Query: 461 VGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
IN IS E FGG K SG GRE + ++ ++Q+K
Sbjct: 452 CYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLK 490
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 259/496 (52%), Gaps = 17/496 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
K + KL L Q +I GE+V + SK + NP + + V V DV A+ +AKE
Sbjct: 26 KAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 77 AFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV 133
AFE W + ++RG +L R +E +++ LA I ++G T +L V +
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 134 DWFSEEARRTYGELVP--SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
+F+ + G +P ++ L L +EP+GV G++ PWN+P+ M++ K A LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 191 GCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
G T VIK IPKGV+N++ S + VG+ L P V I
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIG 262
Query: 251 FTGSTQVGKILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
FTGST+VGK + C+ +K++SL LGG +P I++++ +L KAV M++ F N G+
Sbjct: 263 FTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENA 322
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDA 369
+AA R ++E + +QFV+ + E+ K I G+ + D N GP + A + K+ Q
Sbjct: 323 IAAGRLFVEESIHNQFVQKVVEEVEKMKI-GNPLERD-TNHGPQNHEAHLRKLVEYCQRG 380
Query: 370 ISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES--L 427
+ +GA ++ GG +V + G FF PT+ T++ M EE FGP+ + +F + L
Sbjct: 381 VKEGATLVCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVL 439
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
AN + GLA FT DI++A V KLQ G V IN + A FGG K+SG G++
Sbjct: 440 SRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDL 499
Query: 488 SRHGMEEFTQIKYMCF 503
+ E+ +IK + F
Sbjct: 500 GEAALNEYLRIKTVTF 515
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 248/488 (50%), Gaps = 26/488 (5%)
Query: 33 YINGEWVHSSKKFPVYN--PANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I+G++V + P + PA E +A + V+ AI SAK A ++W+ +P RG
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG 77
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
+LKR + AL+ + T ++GKP E++ V S D F +G + PS
Sbjct: 78 RILKRAADIMRERNDALSTLETLDTGKPIQETI--VADPTSGADAF-----EFFGGIAPS 130
Query: 151 -------PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
P+ R PLGV I WN+P + K APAL AG V K
Sbjct: 131 ALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTP 190
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
+PKG+ NV+ R G LL P VA +S TGS G+ + +
Sbjct: 191 LGALKIAEILIEAGLPKGLFNVIQGDR----DTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246
Query: 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
+ +K +++ELGG +P IV+ +A+++ AV GAM F + GQ C R +Q++
Sbjct: 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKA 306
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+F+E LK T++ I GD + +LGPL++ AQ EKV S ++ ++GA +I GGG
Sbjct: 307 RFLENLKRR-TEAMILGD-PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIP 364
Query: 384 TKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
+ + + PT+ ++T DM EE+FGPV + F E+E L AN + GLAG
Sbjct: 365 NNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGV 424
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK-- 499
FT D+++A RV L+ G + IN + E FGG K+SG GRE S +E ++++K
Sbjct: 425 FTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV 484
Query: 500 YMCFGNLE 507
Y+ G ++
Sbjct: 485 YVSTGKVD 492
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 256/485 (52%), Gaps = 26/485 (5%)
Query: 31 QAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-----WSQ 83
Q +I+GEW +K+ P NP+ + + D+P EDV A+ +AK A + WS
Sbjct: 9 QLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSA 68
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE---VVYANSFVDWFSEEA 140
+ R L+ +++ K L ++ + + GKP E+L + VV + +EE
Sbjct: 69 ASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGLAEEL 128
Query: 141 RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXX 200
+ P+ + + +++EP+GVV LITPWN+P M T K+APALAAGC ++K
Sbjct: 129 DSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSE 188
Query: 201 XXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+P+GVLN+VT + G L + P V ISFTGS+ G
Sbjct: 189 LASVTCLELGEICKEVGLPRGVLNIVTGL---GHEAGASLASHPDVDKISFTGSSATGSK 245
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ + +Q +K +SLELGG +P +V+ + +L K + F GQ C A +R ++ E
Sbjct: 246 IMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHES 305
Query: 321 VFDQFVEML-----KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAK 375
+ +FV+ L ++I+ +G C LGP+++ AQ +KV + + A S+GA
Sbjct: 306 IAVEFVDKLVKWAENIKISDPLEEG-------CRLGPIVSEAQYKKVLNCISSAKSEGAT 358
Query: 376 VILGGGKVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSN 434
++ GG + L +F PTI+T++T M + EEVFGPV F TEEE++ +AN+++
Sbjct: 359 ILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTH 418
Query: 435 TGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEE 494
GL +ND+ + R+ K LQ G+V IN S +A +GG+K SG GRE G+E
Sbjct: 419 YGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLEN 478
Query: 495 FTQIK 499
+ +K
Sbjct: 479 YLSVK 483
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 248/477 (51%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 15 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 74
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 75 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 134
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 135 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 192
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 193 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 249
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ C A +R +QE ++
Sbjct: 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 309
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 310 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 367
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 368 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 426
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 427 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 483
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 169/482 (35%), Positives = 255/482 (52%), Gaps = 22/482 (4%)
Query: 31 QAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTTP 86
Q YI GEW KK P+ NPA +E + D+P EDV A+ +A++A + W TT
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFS------EEA 140
+R L+ ++ K LA + + +SGK ES ++ ++++ +
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEALDSR 144
Query: 141 RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXX 200
R T L KS ++REPLGVVGLITPWN+P+ M KVAPALAAGC ++K
Sbjct: 145 RMTPVNLNSDSYKS---YVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 201 XXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+P G LN++T A G L + PHV ISFTGS G
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEA---GGPLASHPHVDKISFTGSGPTGSK 258
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSN-ANLQKAVSGAMAAKFRNCGQACVAANRFLIQE 319
+ + +Q +K +SL LGG +P +V+ + NL A + F N GQ C A +R ++QE
Sbjct: 259 IMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQE 318
Query: 320 QVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379
+ F++ L ++ TK+ D + D C LGP+++ Q EKV + +A S+GA ++ G
Sbjct: 319 NIASAFMDRL-LKWTKNIKISDPLEED-CKLGPVVSAGQYEKVLKFISNAKSEGATILCG 376
Query: 380 GGKVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIK-FKTEEESLCVANNSNTGL 437
G + L ++ PTI+T++ M + EEVFGPV +C+K FKTEE+++ +AN++ GL
Sbjct: 377 GERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPV-LCVKTFKTEEQAIELANDTKYGL 435
Query: 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497
+ D+ + R K Q G++ IN + E +GG K SG GR+ + G+E F
Sbjct: 436 GAAVMSKDVKRCERFTKAFQTGIIWINCSQPTFNELPWGGKKRSGFGRDLGKWGLENFLN 495
Query: 498 IK 499
IK
Sbjct: 496 IK 497
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 248/477 (51%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ C A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 249/477 (52%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++L+LGG +P I+ S+A++ AV A A F N GQ+C A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 258/480 (53%), Gaps = 16/480 (3%)
Query: 31 QAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-----WSQ 83
Q +++GEW + ++ PV NP + H+ ++P EDV A+ +A+ A ++ W++
Sbjct: 26 QLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWAR 85
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEAR-- 141
R L+ ++ K LA++ + GKP E+ ++ ++F+++A
Sbjct: 86 APGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEAL 145
Query: 142 -RTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXX 200
+ V P+++ + + REP+GVVGLITPWN+P+ M T K+APALAAGCT V+K
Sbjct: 146 DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSE 205
Query: 201 XXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+P GVLN+VT +A G L P V ++FTGS + GK
Sbjct: 206 LASVTCLELADICKEVGLPSGVLNIVTGLGPDA---GAPLSAHPDVDKVAFTGSFETGKK 262
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ + + +K ++LELGG +P +V+ + ++ KAV + F GQ C A +R LI +
Sbjct: 263 IMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTK 322
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+ +F E + V K+ D + + C LGP+++ Q EK+ + +A S+GA ++ GG
Sbjct: 323 IAKKFNERM-VAWAKNIKVSDPLE-EGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 380
Query: 381 GKVTKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439
+ L FF PTI+T+IT M + EEVFGPV +F TE+E++ +AN++ GLAG
Sbjct: 381 VRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAG 440
Query: 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+ D + R+ +++ G + +N +A +GG K SG GRE G++ + +K
Sbjct: 441 AVISGDRERCQRLSEEIDAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVK 500
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 247/477 (51%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++F GST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFAGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ C A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 248/477 (51%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ C A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG G+E +G++ +T++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGQELGEYGLQAYTEVK 489
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 262/483 (54%), Gaps = 12/483 (2%)
Query: 23 KLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADV----PDMGVEDVQYAIMSAKEAF 78
+L + + Q ++G+ V ++ + + + H +V P+ +DV+ A+ +A++AF
Sbjct: 16 RLRIKSRYQXLVDGKSVDAASGSTI-DRVSPGHAGEVVGTWPEASADDVRKAVAAARKAF 74
Query: 79 EQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWF 136
+ W + + ER + + + ++ LA I + E GKP ++ GE+ + +
Sbjct: 75 DAGPWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYA 134
Query: 137 SEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVI 196
+ +AR G+ + + L++REP+GVVG+ITPWNFP + + +V A+ +GCT V+
Sbjct: 135 AGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVL 194
Query: 197 KXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQ 256
K IP GV NVVT + G++L P+V ++FTGS +
Sbjct: 195 KPSEFTSGTSIRLAELAREAGIPDGVFNVVTG---YGDPAGQVLAEDPNVDXVAFTGSVR 251
Query: 257 VGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL 316
VG L ++ +KR+ LELGG P IV+++A+L A G + N GQ C++ +R L
Sbjct: 252 VGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLL 311
Query: 317 IQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376
+QE + D E L ++I++ GD N++ +G I+ A EKV S V I+ GA++
Sbjct: 312 VQEGIRDALXERL-LDISRKVAFGD-PLNERTKIGAXISEAHAEKVHSYVTAGITSGAEL 369
Query: 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
+LGG ++ + ++APT+ +TPD EE+FGPV + FKT +E++ +AN + G
Sbjct: 370 LLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFG 429
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496
L+ ++ ++ A + ++++ G IN I E GG K+SGLGRE R+G +E++
Sbjct: 430 LSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYS 489
Query: 497 QIK 499
Q K
Sbjct: 490 QFK 492
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 259/502 (51%), Gaps = 22/502 (4%)
Query: 12 TVKQMHMKYLQKLCLSTYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQY 69
T++++ + ++ L +I GE+V S + FP +PA +E L G +V
Sbjct: 14 TIEEVRRRLKERPALH-----FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDR 68
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYA 129
A +A EAF++WS+T KER L R + +E + LA + ++G+ +V A
Sbjct: 69 AAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARA 128
Query: 130 NSFVDWFSEEARRTYGELVPSPVKSKELLM-VREPLGVVGLITPWNFPMAMITRKVAPAL 188
+++E A + PV L VR P G VG+ITPWN P+ + T ++APAL
Sbjct: 129 AENFAFYAEYAEHAMEDRT-FPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPAL 187
Query: 189 AAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAG 248
A G T V+K +P GV N+V A G L P V
Sbjct: 188 AFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEA---GAALVAHPLVPL 244
Query: 249 ISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQA 308
++ TG T+ GKI+ + + +KRLS ELGG +P +V+++A+L++A+ + F G+
Sbjct: 245 LTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGER 304
Query: 309 CVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQD 368
C A++R L++E++F+ FV + VE ++ G + + +GPLI+ +++V V+
Sbjct: 305 CTASSRLLVEEKIFEDFVGKV-VERARAIRVGH-PLDPETEVGPLIHPEHLQRVLGYVEA 362
Query: 369 AISKGAKVILGG--GKVTKLGSK-----FFAPTILTNITPDMLCYTEEVFGPVAVCIKFK 421
+GA++++GG K + G + PT+ M EE+FGPV V I FK
Sbjct: 363 GKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGEN-HMKIAQEEIFGPVLVAIPFK 421
Query: 422 TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKES 481
EEE+L AN++ GLA Y FT D+ +A R+ +L+ GMV +N + H FGGVK S
Sbjct: 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGS 481
Query: 482 GLGREGSRHGMEEFTQIKYMCF 503
G REG + ++ +T +K +
Sbjct: 482 GDRREGGTYALDFYTDLKTIAL 503
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 247/477 (51%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 247/477 (51%), Gaps = 16/477 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 244/473 (51%), Gaps = 16/473 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ C A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 239/456 (52%), Gaps = 18/456 (3%)
Query: 49 NPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108
NPA + LA P +++++A+ A F++W T+ +R L+ + L + + A
Sbjct: 13 NPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEXA 72
Query: 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP--VKSKELLMVREPLGV 166
+ +T+E GKP ++ EV + + DW++E L P P V++++ ++ PLGV
Sbjct: 73 QCITREXGKPIKQARAEVTKSAALCDWYAEHGP---AXLNPEPTLVENQQAVIEYRPLGV 129
Query: 167 VGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVV 226
+ I PWNFP+ + R P L AG + ++K P GV V
Sbjct: 130 ILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWV 189
Query: 227 TSSRTNANSVG-KLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285
NAN+ G P +A ++ TGS + G + + +K+ LELGG+ PFIV
Sbjct: 190 -----NANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244
Query: 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD--TS 343
++A+L+ AV A+A +++N GQ C AA RF+++E + F + V + GD
Sbjct: 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRF-VAAAAALKXGDPLVE 303
Query: 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM 403
+ND LGP +++ VQ ++++GA+++LGG K+ G+ ++A T+L ++TPD
Sbjct: 304 END---LGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGN-YYAATVLADVTPDX 359
Query: 404 LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463
+ +E+FGPVA K +L +AN+S GL+ FT D + A +L+ G V I
Sbjct: 360 TAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEXAARLECGGVFI 419
Query: 464 NEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
N S AFGGVK+SG GRE S G+ EF ++
Sbjct: 420 NGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQ 455
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 246/479 (51%), Gaps = 16/479 (3%)
Query: 29 YTQAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQ 83
Y Q +IN EW S K FP NP+ + + V + DV A+ +A+ AF+ W +
Sbjct: 18 YNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRR 77
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARR 142
ERG +L R +E ++ LA + T ++GKP S L ++ + +++ A +
Sbjct: 78 MDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADK 137
Query: 143 TYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXX 201
+G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 138 YHGKTIP--IDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQ 195
Query: 202 XXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261
P GV+NV+ A G + + V ++FTGST+VG ++
Sbjct: 196 TPLTALYVANLIKEAGFPPGVVNVIPGFGPTA---GAAIASHEDVDKVAFTGSTEVGHLI 252
Query: 262 YSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ +KR++LE+GG +P I+ S+A++ AV A A F N GQ C A +R +QE
Sbjct: 253 QVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQED 312
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
++ +FVE V KS + G+ + + GP ++ Q +KV ++ +G K++ GG
Sbjct: 313 IYAEFVER-SVARAKSRVVGNPF-DSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGG 370
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
G G F PT+ ++ M EE+FGPV +KFK+ EE + ANNS GLA
Sbjct: 371 GAAADRGY-FIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAA 429
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 430 VFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVK 488
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 255/479 (53%), Gaps = 19/479 (3%)
Query: 33 YINGEWVHSSKKFPVY--NPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YING W S +Y +P+ +E A + D AI +AK+AF+ W T+P ER
Sbjct: 29 YINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL 88
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARR-TYGELV 148
+++ L+ E +A+ ++ E G P +L + +S + F + + ++ E +
Sbjct: 89 GFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL 148
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
+++ ++ + +GVVGLITPWN+PM +T KV PAL AGCT V+K
Sbjct: 149 IE--GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAML 206
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+P GV N++ N VG L P + ISFTGST+ GK + + S
Sbjct: 207 FAEILDEAALPSGVFNLINGDGAN---VGSYLSAHPDLEMISFTGSTRAGKDISKNASNT 263
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+KR+ LELGG I++++A++ A+ + F N GQ+C A R L+++ ++D+ ++
Sbjct: 264 LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKT 322
Query: 329 LKVEITKSFI-QGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
K K+ + G + N ++GP+++ Q +K+ ++Q I +GA ++ GG + +G
Sbjct: 323 AKDIAEKTQVGPGHQTGN---HIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGL-PMG 378
Query: 388 SK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
+ + PT+ ++ P M + EE+FGPV + F TE+E++ +AN++ GL Y +
Sbjct: 379 MERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQ 438
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
D S+ R+ +++ GMV +N G + FGGVK SG REG G++EF K + +
Sbjct: 439 DRSKCRRIAAQVRSGMVEVN-GHELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 239/474 (50%), Gaps = 13/474 (2%)
Query: 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI G +V +S F NPAN E LA V EDV+ A+ SA E + W+ T +R
Sbjct: 10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 69
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L+R + L LA + T ++GKP E+ ++V +++++ GE +P
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
++ + REPLGVV I WN+P+ + K APALAAG + K
Sbjct: 130 LR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-ILYSHCSQG 268
+P GV NV+T S VG+ L P + ISFTG T GK ++ S S
Sbjct: 189 AEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K +++ELGG +P I++ +A+L +A A+ A F + GQ C R I +F E
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARF-EA 304
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG- 387
+E + GD +++ N GPL++ +E V ++ ++ A+++ GG +VT
Sbjct: 305 KVLERVQRIRLGD-PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAF 363
Query: 388 --SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ APT+ T+ DM EE+FGPV + + E+E++ AN++ GLA T D
Sbjct: 364 GKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 423
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+++A R +L+ G+ IN S E GG K+SG+GRE + +T+IK
Sbjct: 424 LARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 239/474 (50%), Gaps = 13/474 (2%)
Query: 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI G +V +S F NPAN E LA V EDV+ A+ SA E + W+ T +R
Sbjct: 9 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 68
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L+R + L LA + T ++GKP E+ ++V +++++ GE +P
Sbjct: 69 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 128
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
++ + REPLGVV I WN+P+ + K APALAAG + K
Sbjct: 129 LR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 187
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-ILYSHCSQG 268
+P GV NV+T S VG+ L P + ISFTG T GK ++ S S
Sbjct: 188 AEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K +++ELGG +P I++ +A+L +A A+ A F + GQ C R I +F E
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARF-EA 303
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG- 387
+E + GD +++ N GPL++ +E V ++ ++ A+++ GG +VT
Sbjct: 304 KVLERVQRIRLGD-PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAF 362
Query: 388 --SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ APT+ T+ DM EE+FGPV + + E+E++ AN++ GLA T D
Sbjct: 363 GKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 422
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+++A R +L+ G+ IN S E GG K+SG+GRE + +T+IK
Sbjct: 423 LARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 476
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 243/473 (51%), Gaps = 16/473 (3%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTT 85
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTY 144
RG +L R +E ++ LA + T ++GKP S L ++ + +++ A + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 145 GELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXX 203
G+ +P + R EP+GV G I PWNFP+ M K+ PALA G V+K
Sbjct: 141 GKTIP--IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 204 XXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL-Y 262
P GV+N+V A G + + V ++FTGST++G+++
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTA---GAAIASHEDVDKVAFTGSTEIGRVIQV 255
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR++LELGG +P I+ S+A++ AV A A F N GQ A +R +QE ++
Sbjct: 256 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY 315
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 316 DEFVER-SVARAKSRVVGNPF-DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI 373
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA F
Sbjct: 374 AADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVF 432
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
T D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +
Sbjct: 433 TKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAY 485
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 254/480 (52%), Gaps = 21/480 (4%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
+I+G+W++ + V NP + E + +P + E+ + AI +A++ E +R +
Sbjct: 3 FIDGKWINR-EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNI 61
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L K+++ K+ LA+I+ ++GKP ++ EV + + + E++PS
Sbjct: 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS-- 119
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCV----IKXXXXXXXXXXX 208
+ + REP+G+VG ITP+NFP+ + K+APA+A G V K
Sbjct: 120 DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKI 179
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+P GV N++T + VG + + V ISFTGS++VG+++ G
Sbjct: 180 IENALKKYNVPLGVYNLLTGA---GEVVGDEIVVNEKVNMISFTGSSKVGELITKKA--G 234
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
K+++LELGG P IV +A+L KAV+ + F GQ C++ L+ E + D+F+EM
Sbjct: 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEM 294
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
V K G+ ++K ++GPLI++ E V+ +V+ AI +G K++LGG K
Sbjct: 295 F-VNKAKVLNVGNPL-DEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG----KRDK 348
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F PTIL ++LC T E F PV I+ EEE + +AN++ GL FTNDI++
Sbjct: 349 ALFYPTILEVDRDNILCKT-ETFAPVIPIIR-TNEEEMIDIANSTEYGLHSAIFTNDINK 406
Query: 449 AWRVGKKLQVGMVGINE-GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNLE 507
+ + + L+ G V IN+ + FGGVK+SGLGREG ++ MEE + IK + E
Sbjct: 407 SLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 238/474 (50%), Gaps = 13/474 (2%)
Query: 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI G +V +S F NPAN E LA V EDV+ A+ SA E + W+ T +R
Sbjct: 9 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 68
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L+R + L LA + T ++GKP E+ ++V +++++ GE +P
Sbjct: 69 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 128
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
++ + REPLGVV I WN+P+ + K APALAAG + K
Sbjct: 129 LR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 187
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-ILYSHCSQG 268
+P GV NV+T S VG+ L P + ISFTG T GK ++ S S
Sbjct: 188 AEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K +++ LGG +P I++ +A+L +A A+ A F + GQ C R I +F E
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARF-EA 303
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG- 387
+E + GD +++ N GPL++ +E V ++ ++ A+++ GG +VT
Sbjct: 304 KVLERVQRIRLGD-PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAF 362
Query: 388 --SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ APT+ T+ DM EE+FGPV + + E+E++ AN++ GLA T D
Sbjct: 363 GKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 422
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+++A R +L+ G+ IN S E GG K+SG+GRE + +T+IK
Sbjct: 423 LARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 476
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 253/495 (51%), Gaps = 19/495 (3%)
Query: 10 SVTVKQMHMKYLQKLCLSTYTQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDV 67
S+TV+ +H K K+ +I G++V S S + +P+ + + ++P D
Sbjct: 2 SLTVQDLHFK--NKV-------NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADA 52
Query: 68 QYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV 127
+ A+ A+ A + W++ T + R +L+ + ++ NK LA ++ E GK + + EV
Sbjct: 53 ENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVD 112
Query: 128 YANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187
+F+D+ + A G+++PS + +++ + + P GVV IT WNFP+A+ RK+ PA
Sbjct: 113 VTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPA 172
Query: 188 LAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVA 247
L G T V+K +P GVLNV+ + + VG+ LC SP
Sbjct: 173 LITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGT---GSVVGQTLCESPITK 229
Query: 248 GISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQ 307
I+ TGST GK +Y ++ + + LELGG AP +V +A+L KA A+ +F NCGQ
Sbjct: 230 MITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQ 289
Query: 308 ACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367
C R + V+D+F+ + + K GD D +GP N +++ +D IV
Sbjct: 290 VCTCVERLYVHASVYDEFMAKF-LPLVKGLKVGDPMDADS-QMGPKCNQREIDNIDHIVH 347
Query: 368 DAISKGAKVILGGGKVTKLGSK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424
+AI +GA V GG T G + ++ PT+L ++ D + EE FGP+ +K + E
Sbjct: 348 EAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSME 407
Query: 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG 484
+++ N+S GL+ Y T + + L+VG V IN G+ + G K+SG G
Sbjct: 408 QAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFG 467
Query: 485 REGSRHGMEEFTQIK 499
E + G+E++ + K
Sbjct: 468 GEDGKFGLEQYLEKK 482
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 238/474 (50%), Gaps = 13/474 (2%)
Query: 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI G +V +S F NPAN E LA V EDV+ A+ SA E + W+ T +R
Sbjct: 10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 69
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L+R + L LA + T ++GKP E+ ++V +++++ GE +P
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
++ + REPLGVV I WN+P+ + K APALAAG + K
Sbjct: 130 LR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-ILYSHCSQG 268
+P GV NV+T S VG+ L P + ISFTG T GK ++ S S
Sbjct: 189 AEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K +++ELGG +P I++ +A+L +A A+ A F + GQ R I +F E
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARF-EA 304
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG- 387
+E + GD +++ N GPL++ +E V ++ ++ A+++ GG +VT
Sbjct: 305 KVLERVQRIRLGD-PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAF 363
Query: 388 --SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ APT+ T+ DM EE+FGPV + + E+E++ AN++ GLA T D
Sbjct: 364 GKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 423
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+++A R +L+ G+ IN S E GG K+SG+GRE + +T+IK
Sbjct: 424 LARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 238/474 (50%), Gaps = 13/474 (2%)
Query: 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI G +V +S F NPAN E LA V EDV+ A+ SA E + W+ T +R
Sbjct: 10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS 69
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L+R + L LA + T ++GKP E+ ++V +++++ GE +P
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
++ + REPLGVV I WN+P+ + K APALAAG + K
Sbjct: 130 LR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKL 188
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-ILYSHCSQG 268
+P GV NV+T S VG+ L P + ISFTG T GK ++ S S
Sbjct: 189 AEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K +++ELGG +P I++ +A+L +A A+ A F + GQ R I +F E
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARF-EA 304
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG- 387
+E + GD +++ N GPL++ +E V ++ ++ A+++ GG +VT
Sbjct: 305 KVLERVQRIRLGD-PQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAF 363
Query: 388 --SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ APT+ T+ DM EE+FGPV + + E+E++ AN++ GLA T D
Sbjct: 364 GKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQD 423
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+++A R +L+ G+ IN S E GG K+SG+GRE + +T+IK
Sbjct: 424 LARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 256/489 (52%), Gaps = 22/489 (4%)
Query: 24 LCLSTYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQW 81
+ T +++ING+W S + + NP + + + ++ A A++A ++W
Sbjct: 1 MSFETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEW 60
Query: 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEAR 141
+++T ++R VL++ L N+ + ++ +E+G +S E+ + +D EA
Sbjct: 61 AKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILD----EAM 116
Query: 142 RTYGEL-----VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVI 196
GEL VPS ++ K + R PLGV+ I+P+NFPM + R +APA+A G + V
Sbjct: 117 TYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVH 176
Query: 197 KXXXXXXXXXXXXXXXX-XXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGST 255
K +P GVLNV+ T+ +G + T+P ISFTGST
Sbjct: 177 KPDIQTAISGGTIIAKAFEHAGLPAGVLNVML---TDVKEIGDGMLTNPIPRLISFTGST 233
Query: 256 QVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRF 315
VG+ + + KR++LELGGN PF V S+A++ +AV A+ KF + GQ C+ NR
Sbjct: 234 AVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRI 293
Query: 316 LIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAK 375
++ + V+D+FVE + K GD + + K +GPLIN Q+EK I++ A + G +
Sbjct: 294 IVHQDVYDEFVEKFTARV-KQLPYGDQT-DPKTVVGPLINERQIEKALEIIEQAKTDGIE 351
Query: 376 VILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNT 435
+ + G +V + P + + E+F P+A IK +++E++ +AN++
Sbjct: 352 LAVEGKRVGNV----LTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEY 407
Query: 436 GLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHT-EAAFGGVKESGLGREGSRHGMEE 494
GL+ FT+D+ + + ++ GM +N+ ++ + AFGG K SG+GR G+ +EE
Sbjct: 408 GLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEE 467
Query: 495 FTQIKYMCF 503
FT K++
Sbjct: 468 FTVTKWISI 476
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 242/487 (49%), Gaps = 34/487 (6%)
Query: 29 YTQAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQT 84
Y + +I G+W +S V PA E++ VP DV A+ +A+ AF+ W T
Sbjct: 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPST 67
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPT--------ESLGEVVY---ANSFV 133
P ER V+ +K L K +++ E+G+PPT S+G + Y A V
Sbjct: 68 PPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKV 127
Query: 134 DWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCT 193
W +E +YG+ + S REP+GVVG I WN P+ + K+APAL AGCT
Sbjct: 128 TW-TETRTGSYGQSIVS----------REPVGVVGAIVAWNVPLFLAVNKIAPALLAGCT 176
Query: 194 CVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTG 253
V+K +P+GVL+VV G+ L ++P + +FTG
Sbjct: 177 IVLKPAAETPLTANALAEVFAEVGLPEGVLSVVP----GGIETGQALTSNPDIDMFTFTG 232
Query: 254 STQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAAN 313
S+ VG+ + ++ +K +LELGG + I+ + +L A+ + + N GQ CV
Sbjct: 233 SSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQT 292
Query: 314 RFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKG 373
R L +D+ V + +T + + +GPLI+ Q +V+ + I +G
Sbjct: 293 RILAPRSRYDEIVAAVTNFVTALPV--GPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEG 350
Query: 374 AKVILGGGKVTKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432
A+++ GGG+ L + FF PT+ ++ M EE+FGPV I + TEE+++ +AN+
Sbjct: 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAND 410
Query: 433 SNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGM 492
S GLAG +T D+ + ++ ++++ G GIN + FGG K SG+GRE G+
Sbjct: 411 SVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENGPEGV 469
Query: 493 EEFTQIK 499
E FTQ K
Sbjct: 470 EHFTQQK 476
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/477 (30%), Positives = 235/477 (49%), Gaps = 18/477 (3%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV---- 148
L + L +K+ + I+++E K ++ EVV +++ +EE R GE++
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 149 -PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 208 XXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
+P GV N +T + +G + V I+FTGST +G+ +
Sbjct: 188 LLAEAFAEAGLPAGVFNTITG---RGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA-- 242
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
G++ + LELGG IV +A+L+ +A F GQ C A R L+ E V D+ VE
Sbjct: 243 GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVE 302
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
++ ++ I + D ++ PLI+ + V+ ++ DA KGA + ++ + G
Sbjct: 303 KIREKVLALTI---GNPEDDADITPLIDTKSADYVEGLINDANDKGATALT---EIKREG 356
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
+ P + +T DM EE FGPV I+ + EE++ ++N S GL FTND
Sbjct: 357 N-LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 416 RAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 221/459 (48%), Gaps = 13/459 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
+ NP + D+ + + A+ +A+ AF WSQTTP ER L + +E
Sbjct: 44 ILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADE 103
Query: 107 LAEIMTQESGKP----PTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVRE 162
A + GKP + L ++ F F+ R + + + R+
Sbjct: 104 FAALEALNCGKPINAVKNDELPAIIDCWRF---FAGAVRNLHAPAAGEYLPGHTSXIRRD 160
Query: 163 PLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGV 222
P+G+VG I PWN+P+ K+APA+ G T V K +P+GV
Sbjct: 161 PIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGV 219
Query: 223 LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282
+NV+T +VG L P V +S TG GK + + ++ +KR LELGG AP
Sbjct: 220 VNVITG---RGETVGNALINHPKVGXVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPV 276
Query: 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342
IVY +A+L+ V+G + N GQ C AA R + ++++ V L + S I+ +
Sbjct: 277 IVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV--STIRYNL 334
Query: 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPD 402
+ + +GPLI+ Q ++V S V+ A + I GG+ FF PT++ T +
Sbjct: 335 DDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQE 394
Query: 403 MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVG 462
EVFGPV +F +++++ AN+S+ GLA +T DIS+A R +LQ G
Sbjct: 395 DEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYGCTW 454
Query: 463 INEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
IN E GG+K+SG G++ S + +E++T ++++
Sbjct: 455 INTHFXLTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 235/477 (49%), Gaps = 18/477 (3%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV---- 148
L + L +K+ + I+++E K ++ EVV +++ +EE R GE++
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 149 -PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 208 XXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
+P GV N +T + +G + V I+F+GST +G+ +
Sbjct: 188 LLAEAFAEAGLPAGVFNTITG---RGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMA-- 242
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
G++ + LELGG IV +A+L+ +A F GQ C A R L+ E V D+ VE
Sbjct: 243 GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVE 302
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
++ ++ I + D ++ PLI+ + V+ ++ DA KGA + ++ + G
Sbjct: 303 KIREKVLALTI---GNPEDDADITPLIDTKSADYVEGLINDANDKGATALT---EIKREG 356
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
+ P + +T DM EE FGPV I+ + EE++ ++N S GL FTND
Sbjct: 357 N-LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 416 RAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 234/477 (49%), Gaps = 18/477 (3%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV---- 148
L + L +K+ + I+++E K ++ EVV +++ +EE R GE++
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 149 -PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 208 XXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
+P GV N +T + +G + V I+FTGST +G+ +
Sbjct: 188 LLAEAFAEAGLPAGVFNTITG---RGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA-- 242
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
G++ + L LGG IV +A+L+ +A F GQ C A R L+ E V D+ VE
Sbjct: 243 GMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVE 302
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
++ ++ I + D ++ PLI+ + V+ ++ DA KGA + ++ + G
Sbjct: 303 KIREKVLALTI---GNPEDDADITPLIDTKSADYVEGLINDANDKGATALT---EIKREG 356
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
+ P + +T DM EE FGPV I+ + EE++ ++N S GL FTND
Sbjct: 357 N-LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 416 RAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 234/477 (49%), Gaps = 18/477 (3%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 8 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 67
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV---- 148
L + L +K+ + I+++E K ++ EVV +++ +EE R GE++
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 127
Query: 149 -PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG K
Sbjct: 128 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 187
Query: 208 XXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
+P GV N +T + +G + V I+FTGST +G+ +
Sbjct: 188 LLAEAFAEAGLPAGVFNTITG---RGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA-- 242
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
G++ + LELGG IV +A+L+ +A F GQ A R L+ E V D+ VE
Sbjct: 243 GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVE 302
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
++ ++ I + D ++ PLI+ + V+ ++ DA KGA + ++ + G
Sbjct: 303 KIREKVLALTI---GNPEDDADITPLIDTKSADYVEGLINDANDKGATALT---EIKREG 356
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
+ P + +T DM EE FGPV I+ + EE++ ++N S GL FTND
Sbjct: 357 N-LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 416 RAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 243/478 (50%), Gaps = 15/478 (3%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
T+ I G+WV +S + NP +D +A+ + DV A +AK+A +W+ T
Sbjct: 13 TKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAA 72
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER ++ R + LE +++ + E + +ESG +++ E+ A + + R +G +
Sbjct: 73 ERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRI 132
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
PS KE + R GVVG+I+PWNFP+ + R VAPALA G VIK
Sbjct: 133 SPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192
Query: 208 XXXXXX-XXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
+P GV++ V + + +G T ISFTGST VG+ +
Sbjct: 193 VIPARIFEEAGVPAGVISTVAGA---GSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAI 249
Query: 267 QG--IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
G +K ++LELGGNAPF+V ++A++ A A F + GQ C++ NR ++ V D+
Sbjct: 250 NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDE 309
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
F+E VE K+ GD S +GP+IN +Q+ + ++ A +GA V + G
Sbjct: 310 FLEKF-VEAVKNIPTGDPSAEGTL-VGPVINDSQLSGLKEKIELAKKEGATVQVEG---- 363
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
+ + P + +++T DM EE+FGP+ +K E + +AN S+ GL+ ++
Sbjct: 364 PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 445 DISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
DI +A + ++ GMV IN+ ++ FGG K SGLGR +EEFT +++
Sbjct: 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 232/477 (48%), Gaps = 32/477 (6%)
Query: 35 NGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
NGEWV S ++ + PA+ L +P + E+V AI AK+A + W ER +
Sbjct: 17 NGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDL 76
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L W LE K+ + E++ E KP ++GEV + ++EA R GE +
Sbjct: 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQ 136
Query: 153 ----KSKELLMV-REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXX 207
SK++ +V REPLGVV I+P+N+P+ + K+APAL G T V K
Sbjct: 137 FKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGI 196
Query: 208 XXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
P+G++ VVT + +G L P + I+FTG T G+ S+
Sbjct: 197 KMVEALADAGAPEGIIQVVTG---RGSVIGDHLVEHPGIDMITFTGGTTTGE----RISE 249
Query: 268 GIKRLS--LELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
K + LELGG P IV +A+L+ S ++ F GQ C A R +Q+ V DQ
Sbjct: 250 KAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQL 309
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
V +K E+ + G S D ++ P+I+ + ++ DA+ GA ++ G K
Sbjct: 310 VANIK-ELVEQLTVG--SPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSG----NK 362
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+PT+L ++TP M EE FGPV I+ K E++ ++N S+ GL FT D
Sbjct: 363 RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKD 422
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAA-----FGGVKESGLGREGSRHGMEEFTQ 497
+A +GK L+VG V IN + TE F GVK+SGLG +G + + T+
Sbjct: 423 TDRAINIGKHLEVGTVHIN----AKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTR 475
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 213/437 (48%), Gaps = 8/437 (1%)
Query: 33 YINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YINGEWV S + V NPA E L VP ED+ YA +A EAF+ WS+ R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
+L + + L +K+ LA ++T E+GK E+LGEV V++ + G+ + S
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXX 210
E R P+GVVG I P+NFPM + A+A G T ++K
Sbjct: 129 IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLV 188
Query: 211 XXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
+PKGV NVV + N + P + ISF GS VG+ +Y S+ +K
Sbjct: 189 ELFEKAGLPKGVFNVVYGAHDVVNGI----LEHPEIKAISFVGSKPVGEYVYKKGSENLK 244
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
R+ G IV ++ANL+ V+ + A F + G+ C+A ++E + D+F+ L+
Sbjct: 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQ 304
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
++ I+ +D LGP+I ++ S ++ + +GA+++ G + F
Sbjct: 305 EKVAD--IKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYF 362
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
PTI N+T +M + +E+F PV I+ K +E++ +AN S FT++ +
Sbjct: 363 VGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIR 422
Query: 451 RVGKKLQVGMVGINEGI 467
+ + GM+GIN G+
Sbjct: 423 YFRENIDAGMLGINLGV 439
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 215/463 (46%), Gaps = 26/463 (5%)
Query: 34 INGEWVHSSKKFPVYNPANDEHLADVPDMGVED-VQYAIMSAKEAFEQWSQTTPKERGIV 92
I+GE + K NPAN E + +D + AI +A +AFE W T P+ER V
Sbjct: 42 IDGERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEERAAV 101
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L R + ++ K + ++ +E+GKP E+ + A F++++ AR+ PV
Sbjct: 102 LFRAVAKVRRKKHEFSALLVKEAGKPWNEADADTAEAIDFMEYY---ARQMIELAKGKPV 158
Query: 153 KSKE---LLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
S+E V P GV +I PWNF A++ + G T V+K
Sbjct: 159 NSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKF 218
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ-- 267
+PKGV+N V S VG L P + I+FTGS +VG ++ ++
Sbjct: 219 VEVLEESGLPKGVVNFVPGS---GAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQ 275
Query: 268 ----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
+K++ E+GG +V + +++ A + F GQ C A +R ++ E+V+D
Sbjct: 276 PGQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYD 335
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+ ++ + +EIT+S G+ D +GP+I+ A K+ ++ I K ++ GGK
Sbjct: 336 EVLKRV-IEITESKKVGEPDSAD-VYMGPVIDQASFNKIMDYIE--IGKEEGRLVSGGKG 391
Query: 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
F PTI ++ P EE+FGPV K + +E+L VANN+ GL G T
Sbjct: 392 DDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVIT 451
Query: 444 NDISQAWRVGKKLQVGMVGINE----GIISHTEAAFGGVKESG 482
+ R ++ VG + N I+ + FGG K SG
Sbjct: 452 KNRDHINRAKQEFHVGNLYFNRNCTGAIVGYH--PFGGFKMSG 492
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 217/492 (44%), Gaps = 14/492 (2%)
Query: 13 VKQMHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIM 72
+ Q +L++L LS NG W S + Y PAN+E +A V + + + +
Sbjct: 5 INQPKYSWLKELGLSEDNPGVYNGSWGGSGEVITSYCPANNEPIARVTQATLAEYEETVQ 64
Query: 73 SAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSF 132
+EA++ W+ +RG ++++ L + L +++ E GK E +GEV
Sbjct: 65 KTREAWKMWADIPAPKRGEIVRQIGDALRKKIKVLGSLVSLEMGKIYVEGVGEVQEYVDV 124
Query: 133 VDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGC 192
D+ +R G ++PS L+ P+G+VG+IT +NFP+A+ A AL G
Sbjct: 125 CDYAVGLSRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGN 184
Query: 193 TCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFT 252
C+ K + + S +G + V +SFT
Sbjct: 185 VCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCGGADIGTAMAKDERVDLLSFT 244
Query: 253 GSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312
GST VGK++ + R LELGGN IV+ +A+L V A+ A GQ C
Sbjct: 245 GSTHVGKMVAMMVQERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTT 304
Query: 313 NRFLIQEQVFDQFVEMLKVEITKSFIQ---GDTSKNDKCNL-GPLINLAQVEKVDSIVQD 368
R ++ E V D VE I K++ Q GD D L GPL V++ + ++
Sbjct: 305 RRLMLHESVHDAVVE----RIAKAYKQVRIGDPW--DPSTLYGPLHTKQAVDQYLAAIEQ 358
Query: 369 AISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428
A +G ++ GGKV + PTI+T + D E F P+ +KFKTEEE+
Sbjct: 359 AKQQGGTLVC-GGKVMDRPGNYVEPTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFA 417
Query: 429 VANNSNTGLAGYFFTNDISQA--WRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGR 485
N GL+ FT D+ + W K G+V +N + AFGG K +G GR
Sbjct: 418 WNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGR 477
Query: 486 EGSRHGMEEFTQ 497
E +++ +
Sbjct: 478 ESGSDSWKQYMR 489
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 216/464 (46%), Gaps = 28/464 (6%)
Query: 34 INGEWVHSSKKFPVYNPANDEHLADVPDMGVEDV-QYAIMSAKEAFEQWSQTTPKERGIV 92
INGE V + K +NPA + L +D+ + AI SA EAF+ W P+ER +
Sbjct: 42 INGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANI 101
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSE---EARRTYGELVP 149
L + + K + + E+GKP E+ + A F+++++ E R E++
Sbjct: 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRG-KEILS 160
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMA-MITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P + P+GV I+PWNF +A M+ VAP + G T V+K
Sbjct: 161 RPGEQNRYFYT--PMGVTVTISPWNFALAIMVGTAVAP-IVTGNTVVLKPASTTPVVAAK 217
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS-- 266
+PKGV+N V S VG L P + I+FTGS VG LY +
Sbjct: 218 FVEVLEDAGLPKGVINYVPGS---GAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV 274
Query: 267 ----QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+KR+ +E+GG +V +A+L A + + F GQ C A +R +I + V+
Sbjct: 275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVY 334
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+ +E V + K+ GD + D +GP+I+ EK+ S ++ I K ++ GG+
Sbjct: 335 DEVLEK-TVALAKNLTVGDPTNRDNY-MGPVIDEKAFEKIMSYIE--IGKKEGRLMTGGE 390
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
F PTI+ ++ P+ + EE+FGPV K + +L +ANN+ GL G
Sbjct: 391 GDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVI 450
Query: 443 TNDISQAWRVGKKLQVGMVGINE----GIISHTEAAFGGVKESG 482
T + + + ++ VG + N I+ + FGG K SG
Sbjct: 451 TRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYH--PFGGFKMSG 492
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 212/493 (43%), Gaps = 10/493 (2%)
Query: 10 SVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQY 69
++ + Q +L++L L + NG W + Y PAN+E +A V V D +
Sbjct: 4 TLLINQPQYAWLKELGLREENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEE 63
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYA 129
+ A+EA++ W+ +RG ++++ L Q L +++ E GK E +GEV
Sbjct: 64 TVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEY 123
Query: 130 NSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALA 189
D+ +R G ++PS L+ P+G+VG+IT +NFP+A+ A A+
Sbjct: 124 VDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI 183
Query: 190 AGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGI 249
G C+ K + + S +G + V +
Sbjct: 184 CGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLL 243
Query: 250 SFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309
SFTGSTQVGK + + R LELGGN I + +A+L V A+ A GQ C
Sbjct: 244 SFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRC 303
Query: 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNL--GPLINLAQVEKVDSIVQ 367
A R I E + D+ V LK K++ Q N+ GPL V V+
Sbjct: 304 TTARRLFIHESIHDEVVNRLK----KAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVE 359
Query: 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL 427
+A +G V+ GGKV + PTI+T + D E F P+ KF+ EEE
Sbjct: 360 EAKKEGGTVVY-GGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVF 418
Query: 428 CVANNSNTGLAGYFFTNDISQ--AWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLG 484
N GL+ FT D+ + W K G+V +N + AFGG K +G G
Sbjct: 419 AWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG 478
Query: 485 REGSRHGMEEFTQ 497
RE +++ +
Sbjct: 479 RESGSDAWKQYMR 491
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 231/484 (47%), Gaps = 26/484 (5%)
Query: 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTP-KERG 90
+Y+ GEW S ++ V +P + +A V E+V+ + + ++ P ER
Sbjct: 21 SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL 80
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
VL++ +E N AE++ +GKP + ++GEV A + + ++ G+ +P
Sbjct: 81 AVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG 140
Query: 151 P----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXX 206
E L+ REPLGVV ITP+N+P+ K+ + G V+K
Sbjct: 141 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 200
Query: 207 XXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
P + ++ A + VA +SFTGST+VG+ +
Sbjct: 201 AMAVKALLDAGFPPDAIALLNLPGKEAEKI----VADDRVAAVSFTGSTEVGERVVK--V 254
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
G+K+ +ELGG P IV +A+L A + GQ C A L + V+ + V
Sbjct: 255 GGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLV 314
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
E + ++ S GD ++ ++GPLI+ + V+++ + ++DA+ KG +V+ GG +L
Sbjct: 315 EEVAKRLS-SLRVGD-PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG---RRL 369
Query: 387 GSKFFAPTIL---TNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
G + PT++ + DM+ Y EVF PVA+ ++ K ++++ +AN GL F
Sbjct: 370 GPTYVQPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFG 429
Query: 444 NDISQAWRVGKKLQVGMVGINE----GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
D+ + R + L+VG + IN+ GI + FGG K+SG+ REG + +E T K
Sbjct: 430 RDVVKIRRAVRLLEVGAIYINDMPRHGIGYYP---FGGRKKSGVFREGIGYAVEAVTAYK 486
Query: 500 YMCF 503
+ F
Sbjct: 487 TIVF 490
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 230/484 (47%), Gaps = 26/484 (5%)
Query: 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTP-KERG 90
+Y+ GEW S ++ V +P + +A V E+V+ + + ++ P ER
Sbjct: 21 SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL 80
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
VL++ +E N AE++ +GKP + ++GEV A + + ++ G+ +P
Sbjct: 81 AVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG 140
Query: 151 P----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXX 206
E L+ REPLGVV ITP+N+P+ K+ + G V+K
Sbjct: 141 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 200
Query: 207 XXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
P + ++ A + VA +SFTGST+VG+ +
Sbjct: 201 AMAVKALLDAGFPPDAIALLNLPGKEAEKI----VADDRVAAVSFTGSTEVGERVVK--V 254
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
G+K+ +ELGG P IV +A+L A + GQ C A L + V+ + V
Sbjct: 255 GGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLV 314
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
E + ++ S GD ++ ++GPLI+ + V+++ + ++DA+ KG +V+ GG +L
Sbjct: 315 EEVAKRLS-SLRVGD-PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG---RRL 369
Query: 387 GSKFFAPTIL---TNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
G + PT + + DM+ Y EVF PVA+ ++ K ++++ +AN GL F
Sbjct: 370 GPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFG 429
Query: 444 NDISQAWRVGKKLQVGMVGINE----GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
D+ + R + L+VG + IN+ GI + FGG K+SG+ REG + +E T K
Sbjct: 430 RDVVKIRRAVRLLEVGAIYINDMPRHGIGYYP---FGGRKKSGVFREGIGYAVEAVTAYK 486
Query: 500 YMCF 503
+ F
Sbjct: 487 TIVF 490
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 230/484 (47%), Gaps = 26/484 (5%)
Query: 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTP-KERG 90
+Y+ GEW S ++ V +P + +A V E+V+ + + ++ P ER
Sbjct: 21 SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL 80
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
VL++ +E N AE++ +GKP + ++GEV A + + ++ G+ +P
Sbjct: 81 AVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG 140
Query: 151 P----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXX 206
E L+ REPLGVV ITP+N+P+ K+ + G V+K
Sbjct: 141 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 200
Query: 207 XXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
P + ++ A + VA +SFTGST+VG+ +
Sbjct: 201 AMAVKALLDAGFPPDAIALLNLPGKEAEKI----VADDRVAAVSFTGSTEVGERVVKVG- 255
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
G+K+ +ELGG P IV +A+L A + GQ C A L + V+ + V
Sbjct: 256 -GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLV 314
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
E + ++ S GD ++ ++GPLI+ + V+++ + ++DA+ KG +V+ GG +L
Sbjct: 315 EEVAKRLS-SLRVGD-PRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGG---RRL 369
Query: 387 GSKFFAPTIL---TNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
G + PT++ + DM+ Y EVF PVA ++ K ++++ +AN GL F
Sbjct: 370 GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFG 429
Query: 444 NDISQAWRVGKKLQVGMVGINE----GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
D+ + R + L+VG + IN+ GI + FGG K+SG+ REG + +E T K
Sbjct: 430 RDVVKIRRAVRLLEVGAIYINDMPRHGIGYYP---FGGRKKSGVFREGIGYAVEAVTAYK 486
Query: 500 YMCF 503
+ F
Sbjct: 487 TIVF 490
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 216/455 (47%), Gaps = 14/455 (3%)
Query: 44 KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGN 103
K+ NP +E A + + + AI A +++W P R +L L+ +
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEH 64
Query: 104 KQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSK--ELLMVR 161
+ LA+ T E GK +ES EV S +++++ L P+ + S ++
Sbjct: 65 EDELAKXXTLEXGKLLSESKEEVELCVSICNYYADHGPEX---LKPTKLNSDLGNAYYLK 121
Query: 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKG 221
+ GV+ PWNFP+ + R AP G ++K P+G
Sbjct: 122 QSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 222 -VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280
++N+ S A+ + P + G++ TGS + G + + +K+ + ELGGN
Sbjct: 182 SLINLYPSYDQLAD-----IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGND 236
Query: 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340
FIV +A+ Q + A+ N GQ C ++ R ++++ +D+ + LK + + G
Sbjct: 237 AFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELK-NVFSNLKAG 295
Query: 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400
D + D L P + EK+++ V++AI GAKV ++ G+ FF PTILT+I
Sbjct: 296 DPLEAD-TTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGA-FFRPTILTDIA 353
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
D + +EVFGP+A + + ++ +AN+S+ GL +DI +A +V +++ G
Sbjct: 354 KDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGX 413
Query: 461 VGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
IN I+ E FGG+K+SG GRE S G+ F
Sbjct: 414 TVINGRWITSGELPFGGIKKSGYGRELSGLGLXAF 448
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 211/462 (45%), Gaps = 22/462 (4%)
Query: 33 YINGEWVHSSKKFPVYNP-ANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI GEWV + ++ NP A E + G + + A+ +A +AF+ W ++R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA-RRTYG--ELV 148
+L + + K+ L + E GK E+ +V A F+++++ A R Y E+V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P P + E V PLG +I PWNFP+A+ T + +A G T + K
Sbjct: 161 PYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ- 267
P GV+N + VG L P + I+FTGS +VG +Y +
Sbjct: 219 VFEIFHEAGFPPGVVNFLPGV---GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275
Query: 268 -----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
KR +E GG IV A+ A G + + + GQ C AA+R ++ + +
Sbjct: 276 APGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAY 335
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
+ +E + ++ + G +N +LGP+++ Q KV S ++ ++G +++LGG +
Sbjct: 336 EPVLERV-LKRAERLSVGPAEEN--PDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
+ G F APT+ T + P EE+FGPV I+ K E+L VAN++ GL G +
Sbjct: 392 LEGEGY-FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESG 482
+ ++ VG + N I FGG K SG
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSG 492
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 211/462 (45%), Gaps = 22/462 (4%)
Query: 33 YINGEWVHSSKKFPVYNP-ANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI GEWV + ++ NP A E + G + + A+ +A +AF+ W ++R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA-RRTYG--ELV 148
+L + + K+ L + E GK E+ +V A F+++++ A R Y E+V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P P + E V PLG +I PWNFP+A+ T + +A G T + K
Sbjct: 161 PYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ- 267
P GV+N + VG L P + I+FTGS +VG +Y +
Sbjct: 219 VFEIFHEAGFPPGVVNFLPGV---GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275
Query: 268 -----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
KR +E GG IV A+ A G + + + GQ C AA+R ++ + +
Sbjct: 276 APGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAY 335
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
+ +E + ++ + G +N +LGP+++ Q KV S ++ ++G +++LGG +
Sbjct: 336 EPVLERV-LKRAERLSVGPAEEN--PDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
+ G F APT+ T + P EE+FGPV I+ K E+L VAN++ GL G +
Sbjct: 392 LEGEGY-FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESG 482
+ ++ VG + N I FGG K SG
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSG 492
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 217/468 (46%), Gaps = 14/468 (2%)
Query: 33 YINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I+G+ V S + ++NPA E V D+ A+ SAK A +W+ T P+ R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
V ++++ L N LAE +++E GK ++ G++V ++ E
Sbjct: 90 RVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXX 210
+ +R+P+G+ ITP+NFP + APA+A G ++K
Sbjct: 150 AGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLA 209
Query: 211 XXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
+P G+LNVV + +++ T P +A +SF GST + + +Y + K
Sbjct: 210 ELXIEAGLPAGILNVVNGDKGAVDAI----LTHPDIAAVSFVGSTPIARYVYGTAAXNGK 265
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL-IQEQVFDQFVEML 329
R G I+ +A+L +A + + A + + G+ C A + + + E+ ++ ++ L
Sbjct: 266 RAQCFGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKL 325
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG-- 387
V +S G + ++K + GP++ +++ S++ I +GAK+++ G G
Sbjct: 326 -VPXVESLRIGPYT-DEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 388 -SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446
F + ++TPD Y E+FGPV ++ + EE+L + G +T D
Sbjct: 384 NGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDG 443
Query: 447 SQAWRVGKKLQVGMVGINEGI-ISHTEAAFGGVKESGLGREGSRHGME 493
A ++ +G VG+N I + +FGG K S G + ++HG +
Sbjct: 444 DAARDFASRINIGXVGVNVPIPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 210/462 (45%), Gaps = 22/462 (4%)
Query: 33 YINGEWVHSSKKFPVYNP-ANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI GEWV + ++ NP A E + G + + A+ +A +AF+ W ++R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA-RRTYG--ELV 148
+L + + K+ L + E GK E+ +V A F+++++ A R Y E+V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
P P + E V PLG +I PWNFP+A+ T + +A G T + K
Sbjct: 161 PYPGEDNESFYV--PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAK 218
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ- 267
P GV+N + VG L P + I+FTGS +VG +Y +
Sbjct: 219 VFEIFHEAGFPPGVVNFLPGV---GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275
Query: 268 -----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
KR +E GG IV A+ A G + + + GQ AA+R ++ + +
Sbjct: 276 APGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAY 335
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
+ +E + ++ + G +N +LGP+++ Q KV S ++ ++G +++LGG +
Sbjct: 336 EPVLERV-LKRAERLSVGPAEEN--PDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKR 391
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
+ G F APT+ T + P EE+FGPV I+ K E+L VAN++ GL G +
Sbjct: 392 LEGEGY-FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVY 450
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESG 482
+ ++ VG + N I FGG K SG
Sbjct: 451 SRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSG 492
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 193/424 (45%), Gaps = 20/424 (4%)
Query: 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFV 133
A+ A +W + + R L++W + + ++ L E + ++G+ L + S
Sbjct: 37 ARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITVLEIDSFLASID 96
Query: 134 DW--FSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAG 191
W + E +T + P + + +V PL VG+I+PWNFP+ + PAL AG
Sbjct: 97 RWCGLAPELLQTSAKNTSIPFIALQQSLVPYPL--VGVISPWNFPLTLSXIDTIPALLAG 154
Query: 192 CTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSS-RTNANSVGKLLCTSPHVAGIS 250
C V+K + VL V T AN + +V +
Sbjct: 155 CAVVVKPSEIAPRFVAPLLXALNTVPELRDVLIFVEGGGETGANLIN-------YVDFVC 207
Query: 251 FTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACV 310
FTGS G+ + ++ LELGG P IV +ANL+ A S + N GQ+C+
Sbjct: 208 FTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCL 267
Query: 311 AANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAI 370
+ R + E F++F L + + +Q + +GP+I Q ++ + DA+
Sbjct: 268 SIERIYVAESKFEEFYHQLIAKAHR--LQLAYPLVEDGAIGPIIAEKQAGIINDHILDAV 325
Query: 371 SKGAKVILGGGKVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCV 429
KGA VI GGKV +LG ++ PT+ TN+ TEE FGP+ F EE++ +
Sbjct: 326 EKGA-VIHCGGKVEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYL 384
Query: 430 ANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHT--EAAFGGVKESGLGREG 487
AN++ GL+ F +A +V ++L G + IN+ ++ E SGLG G
Sbjct: 385 ANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLG--G 442
Query: 488 SRHG 491
SR G
Sbjct: 443 SRVG 446
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 201/453 (44%), Gaps = 10/453 (2%)
Query: 33 YINGEWVHS-SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI G+W+ + +P + V A+ +A+EAF W++ ++R
Sbjct: 9 YIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIE 68
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L+R+ L+ LA ++ +E+GKP ES EV + V + R GE P
Sbjct: 69 LLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEKS-GP 127
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXX 211
+ ++ +P GVV + P+NFP + + PAL AG V K
Sbjct: 128 LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLK 187
Query: 212 XXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH-CSQGIK 270
+P GVLN+V R G L + G+ FTGS++ G +L+S Q K
Sbjct: 188 AWIQAGLPAGVLNLVQGGR----ETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQK 243
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
L+LE GGN P +V A+L AV + + F + GQ C A R L+ + + +
Sbjct: 244 ILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARL 303
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
V ++ + G + G +I+L+ E + + I KGA+ +L + G+
Sbjct: 304 VAVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPID-GAAL 362
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
P IL +++ EE FGP+ I++ ++ AN + GLA ++ +
Sbjct: 363 LTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFE 421
Query: 451 RVGKKLQVGMVGINEGII-SHTEAAFGGVKESG 482
+ + + G+V N+ + + + A FGG+ SG
Sbjct: 422 QFLVESRAGIVNWNKQLTGAASSAPFGGIGASG 454
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 161/345 (46%), Gaps = 21/345 (6%)
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXX 212
+ EL + EPLGVV +I WN+P + + + A+AAG V+K
Sbjct: 110 QQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATI 169
Query: 213 XXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRL 272
+ K + V+ + K I +TGST VGKI+ + ++ + +
Sbjct: 170 IPQY-LDKDLYPVINGGVPETTELLK-----ERFDHILYTGSTGVGKIIMTAAAKHLTPV 223
Query: 273 SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVE 332
+LELGG +P V N +L A KF N GQ CVA + L + +Q VE LK
Sbjct: 224 TLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKS 283
Query: 333 ITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA 392
+ + + G+ +K + + G +I+ ++V +++ G KV GG +++ A
Sbjct: 284 LKEFY--GEDAKKSR-DYGRIISARHFQRVMGLIE-----GQKVAYGG--TGDAATRYIA 333
Query: 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRV 452
PTILT++ P EE+FGPV + ++ EE++ N LA Y F+++ ++
Sbjct: 334 PTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKM 393
Query: 453 GKKLQVGMVGINEGIISHT--EAAFGGVKESGLGREGSRHGMEEF 495
+ G V N+ I+ T FGGV SG+ GS HG + F
Sbjct: 394 IAETSSGGVAANDVIVHITLHSLPFGGVGNSGM---GSYHGKKSF 435
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 182/426 (42%), Gaps = 23/426 (5%)
Query: 80 QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEE 139
WS+T R L++ LE ++ +E GK ++L E+ A F +++ +
Sbjct: 565 GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQ 624
Query: 140 ARRTYGE--LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIK 197
R+ +G +P P L +R GV I+PWNFP+A+ +V AL AG + V K
Sbjct: 625 GRKLFGSETAMPGPTGESNALTMRG-RGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAK 683
Query: 198 XXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257
IPK L +VT +G L P +AG+ FTGST+V
Sbjct: 684 PAEQTPRIAREAVALLHEAGIPKSALYLVTGD----GRIGAALTAHPDIAGVVFTGSTEV 739
Query: 258 GKILYSHCSQG---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR 314
+ + + I L E GG I + A ++ + + FR+ GQ C A
Sbjct: 740 ARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRL 799
Query: 315 FLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGA 374
+QE V D+ +EM+ + GD S + ++GP+I++ +++D+ + + A
Sbjct: 800 LFVQEDVADRMIEMV-AGAARELKIGDPS-DVATHVGPVIDVEAKQRLDAHIAR-MKTEA 856
Query: 375 KVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANN 432
++ G F AP I L TEEVFGP+ ++++ E E L
Sbjct: 857 RLHFAGPAPEGC---FVAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLERVLRAIER 911
Query: 433 SNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESGLG-REGSR 489
+ GL + + ++QVG + +N +I FGG SG G + G
Sbjct: 912 TGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGP 971
Query: 490 HGMEEF 495
H + F
Sbjct: 972 HYLARF 977
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 20/348 (5%)
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXX 212
+ +L + EPLGVV +I WN+P + + + A+AAG ++K
Sbjct: 93 QQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATL 152
Query: 213 XXXXQIPKGV-LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKR 271
IP+ + N+ + +LL I +TGST VGKI+ + ++ +
Sbjct: 153 -----IPQYMDQNLYLVVKGGVPETTELL--KERFDHIMYTGSTAVGKIVMAAAAKHLTP 205
Query: 272 LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKV 331
++LELGG +P V + +L A KF N GQ CVA + L + +Q VE LK
Sbjct: 206 VTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKK 265
Query: 332 EITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFF 391
+ + G+ +K + + G +IN ++V ++ + KV GG S++
Sbjct: 266 SLKDFY--GEDAKQSR-DYGRIINDRHFQRVKGLIDN-----QKVAHGG--TWDQSSRYI 315
Query: 392 APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWR 451
APTIL ++ P EE+FGPV + ++ EE++ N LA Y F+N+ +
Sbjct: 316 APTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKK 375
Query: 452 VGKKLQVGMVGINEGIISHT--EAAFGGVKESGLGREGSRHGMEEFTQ 497
+ + G V N+ I+ T FGGV SG+G + E F+
Sbjct: 376 MIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSH 423
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 192/422 (45%), Gaps = 41/422 (9%)
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPT--------ESLGEVVYANSFVD-WFSEEARRT 143
L+R + + NK+AL + ++ GKP L E+ +A + +D W + +
Sbjct: 56 LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVS--- 112
Query: 144 YGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXX 201
VPSP + E +V+EP GV +I P+N+P+ + + A+ G TC+IK
Sbjct: 113 ----VPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSET 168
Query: 202 XXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261
P+ V + N++ L + P I FTGS VGK++
Sbjct: 169 TPETSAVIEKIIAEAFAPEYVAVIQGGRDENSH-----LLSLP-FDFIFFTGSPNVGKVV 222
Query: 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
++ + + LELGG P IV +A+L + V+ M KF N GQ C+A + + V
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSV 282
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
D +E L VE K T + + G L+ QV+++ S+++ ++G ++
Sbjct: 283 KDALLERL-VERVK------TELPEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQA 333
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG-LAGY 440
V+K + + T++ + + +EE+FGP+ ++F + ++ N + LA Y
Sbjct: 334 DVSK---RALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEA---AFGGVKESGLGREGSRHGMEEFTQ 497
F D+ A + ++Q G +N G++ H + FGG+ SG+G FT
Sbjct: 391 VFGKDMDVAKGIINQIQSGDAQVN-GVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTH 449
Query: 498 IK 499
K
Sbjct: 450 KK 451
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 211/466 (45%), Gaps = 26/466 (5%)
Query: 33 YINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
+ING+ V ++ P NP E L + G +V AI +AK AF W T P+ R
Sbjct: 535 FINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAE 594
Query: 92 VLKRWLKELEGNKQALAEI---MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
L LK + ++ L E+ E GK ++ +V A F+++++ E R
Sbjct: 595 YL---LKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQR 651
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXX 208
+ EP GV +I PWNFP+A+ + A+ G V K
Sbjct: 652 VGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711
Query: 209 XXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ- 267
+P+GV N T R + +G L P ++ I+FTGS + G + ++
Sbjct: 712 LVELFREAGLPEGVFNF-TPGR--GSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 268 -----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+K++ E+GG I+ +A+L +AV + + F GQ C A +R ++ + V+
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+F+E L V + K+ G S++ +G + + ++ + + I K +L
Sbjct: 829 DKFIERL-VSMAKATKVG-PSEDPANYMGAVADDKAMKSIKEYAE--IGKREGHVLYESP 884
Query: 383 VTKLGSKFFAP-TILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
V G +F P TI+ I P+ EE+FGPV ++ K ++++ AN++ L G
Sbjct: 885 VPA-GEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGI 943
Query: 442 FTNDISQAWRVGKKLQVGMVGINE---GIISHTEAAFGGVKESGLG 484
F+ + ++ +VG + IN G + + FGG + SG+G
Sbjct: 944 FSRSPEHLAKARREFRVGNLYINRNNTGALVERQ-PFGGARMSGVG 988
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 191/422 (45%), Gaps = 41/422 (9%)
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPT--------ESLGEVVYANSFVD-WFSEEARRT 143
L+R + + NK+AL + ++ GKP L E+ +A + +D W + +
Sbjct: 56 LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVS--- 112
Query: 144 YGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXX 201
VPSP + E +V+EP GV +I P+N+P+ + + A+ G TC+IK
Sbjct: 113 ----VPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSET 168
Query: 202 XXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261
P+ V + N++ L + P I FTGS VGK++
Sbjct: 169 TPETSAVIEKIIAEAFAPEYVAVIQGGRDENSH-----LLSLP-FDFIFFTGSPNVGKVV 222
Query: 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
++ + + LELGG P IV +A+L + V+ M KF N GQ +A + + V
Sbjct: 223 MQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSV 282
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
D +E L VE K T + + G L+ QV+++ S+++ ++G ++
Sbjct: 283 KDALLERL-VERVK------TELPEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQA 333
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNT-GLAGY 440
V+K + + T++ + + +EE+FGP+ ++F + ++ N + LA Y
Sbjct: 334 DVSK---RALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEA---AFGGVKESGLGREGSRHGMEEFTQ 497
F D+ A + ++Q G +N G++ H + FGG+ SG+G FT
Sbjct: 391 VFGKDMDVAKGIINQIQSGDAQVN-GVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTH 449
Query: 498 IK 499
K
Sbjct: 450 KK 451
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 183/446 (41%), Gaps = 27/446 (6%)
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA--LAEIMTQESGKPPTESLGEVV 127
AI +A A ++W +R V + L G ++A LA+ M G+ T E+
Sbjct: 105 AIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMV---GQGKTVIQAEID 161
Query: 128 YANSFVDWFSEEAR---RTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184
A +D+F A+ GE S S + R G V I+P+NF
Sbjct: 162 AAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAG 221
Query: 185 APALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSP 244
APAL G + K +P ++ V + + + G + +S
Sbjct: 222 APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA---DGPTFGDTVTSSE 277
Query: 245 HVAGISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAM 298
H+ GI+FTGS K L+ +Q + R L+ E GG V+S+A++ VSG +
Sbjct: 278 HLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTL 337
Query: 299 AAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQ 358
+ F GQ C A +R + + ++ Q L E ++ + GD +++ +I+
Sbjct: 338 RSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV-GDPAEDFGTFFSAVIDAKA 396
Query: 359 VEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418
++ ++ A S + IL GG+ + + P I+ + P EE+FGPV
Sbjct: 397 FARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVY 456
Query: 419 KF---KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIISHT-- 471
+ K E V + ++ GL G F D + + L+ G IN+
Sbjct: 457 VYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVG 516
Query: 472 EAAFGGVKESGLG-REGSRHGMEEFT 496
+ FGG + SG + G H + +T
Sbjct: 517 QQPFGGARASGTNDKPGGPHYILRWT 542
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 181/446 (40%), Gaps = 27/446 (6%)
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA--LAEIMTQESGKPPTESLGEVV 127
AI +A A ++W +R + + L G ++A LA+ M G+ T E+
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMV---GQGKTVIQAEID 164
Query: 128 YANSFVDWFSEEARRTY---GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184
A +D+F A+ G+ S S + R G V I+P+NF
Sbjct: 165 AAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAG 224
Query: 185 APALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSP 244
APAL G + K +P ++ V + + G + +S
Sbjct: 225 APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA---DGPLFGDTVTSSE 280
Query: 245 HVAGISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAM 298
H+ GI+FTGS K L+ +Q + R L+ E GG V+ +A+++ VSG +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 299 AAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQ 358
+ F GQ C A +R + ++ Q L E ++ + GD +++ +I+
Sbjct: 341 RSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKV-GDPAEDFGTFFSAVIDAKS 399
Query: 359 VEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418
++ ++ A S + IL GGK F P I+ + P EE+FGPV
Sbjct: 400 FARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVY 459
Query: 419 KF---KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIISHT-- 471
+ K +E V + ++ GL G F+ D K L+ G IN+
Sbjct: 460 VYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVG 519
Query: 472 EAAFGGVKESGLG-REGSRHGMEEFT 496
+ FGG + SG + G H + +T
Sbjct: 520 QQPFGGARASGTNDKPGGPHYILRWT 545
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 180/446 (40%), Gaps = 27/446 (6%)
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA--LAEIMTQESGKPPTESLGEVV 127
AI +A A ++W +R + + L G ++A LA+ M G+ T E+
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMV---GQGKTVIQAEID 164
Query: 128 YANSFVDWFSEEARRTY---GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184
A +D+F A+ G+ S S + R G V I+P+NF
Sbjct: 165 AAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAG 224
Query: 185 APALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSP 244
APAL G + K +P ++ V + + G + +S
Sbjct: 225 APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA---DGPLFGDTVTSSE 280
Query: 245 HVAGISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAM 298
H+ GI+FTGS K L+ +Q + R L+ E GG V+ +A+++ VSG +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 299 AAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQ 358
+ F GQ C A R + ++ Q L E ++ + GD +++ +I+
Sbjct: 341 RSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKV-GDPAEDFGTFFSAVIDAKS 399
Query: 359 VEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418
++ ++ A S + IL GGK F P I+ + P EE+FGPV
Sbjct: 400 FARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVY 459
Query: 419 KF---KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIISHT-- 471
+ K +E V + ++ GL G F+ D K L+ G IN+
Sbjct: 460 VYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVG 519
Query: 472 EAAFGGVKESGLG-REGSRHGMEEFT 496
+ FGG + SG + G H + +T
Sbjct: 520 QQPFGGARASGTNDKPGGPHYILRWT 545
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 180/446 (40%), Gaps = 27/446 (6%)
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA--LAEIMTQESGKPPTESLGEVV 127
AI +A A ++W +R + + L G ++A LA+ M G+ T E+
Sbjct: 108 AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMV---GQGKTVIQAEID 164
Query: 128 YANSFVDWFSEEARRTY---GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184
A +D+F A+ G+ S S + R G V I+P+NF
Sbjct: 165 AAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAG 224
Query: 185 APALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSP 244
APAL G + K +P ++ V + + G + +S
Sbjct: 225 APALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA---DGPLFGDTVTSSE 280
Query: 245 HVAGISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAM 298
H+ GI+FTGS K L+ +Q + R L+ E GG V+ +A+++ VSG +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 299 AAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQ 358
+ F GQ C A R + ++ Q L E ++ + GD +++ +I+
Sbjct: 341 RSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKV-GDPAEDFGTFFSAVIDAKS 399
Query: 359 VEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418
++ ++ A S + IL GGK F P I+ + P EE+FGPV
Sbjct: 400 FARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVY 459
Query: 419 KF---KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIISHT-- 471
+ K +E V + ++ GL G F+ D K L+ G IN+
Sbjct: 460 VYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVG 519
Query: 472 EAAFGGVKESGLG-REGSRHGMEEFT 496
+ FGG + SG + G H + +T
Sbjct: 520 QQPFGGARASGTNDKPGGPHYILRWT 545
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 24/264 (9%)
Query: 20 YLQKLCLSTYTQAY-INGEWVHSSKKF---PVYNPANDEHLADVPDMGVEDVQYAIMSAK 75
Y Q + T + + GEW+ + F P + PA+D + V E V A +A+
Sbjct: 19 YFQSXXIFTPKGKHLVAGEWLDGAGTFASAPAHGPAHDFAVGTV-----ELVNRACEAAE 73
Query: 76 EAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE--------VV 127
EAF + ++ KER L+ E+E +A+ EI +QE+G P GE +
Sbjct: 74 EAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRL 133
Query: 128 YANSFV--DWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR--K 183
+A+ D+ E P+P +E+ +V+ P+G V + NFP+A T
Sbjct: 134 FADHIEKGDYLDRRVDAAXPERQPAP--RQEIRLVQRPVGPVAVFGASNFPLAFSTAGGD 191
Query: 184 VAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQIPKGVL-NVVTSSRTNANSVGKLLCT 242
A ALAAGC V+K GV V + + + VG L
Sbjct: 192 TAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQ 251
Query: 243 SPHVAGISFTGSTQVGKILYSHCS 266
PH+ + FTGS G+ L+ C+
Sbjct: 252 HPHIKAVGFTGSLAGGRALFDLCA 275
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 131/342 (38%), Gaps = 40/342 (11%)
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQI-PKGVL 223
GV I +NFP + K APAL +G ++K I P G L
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS--QGIKRLSLELGGNAP 281
+++ S S G LL +SFTGS L +H + Q RL++E
Sbjct: 213 SIICGS-----SAG-LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 266
Query: 282 FIVYSNAN--------LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI 333
I+ ++A K V M K GQ C A R + E + +E LK ++
Sbjct: 267 AILCADATPDTPAFDLFIKEVVREMTVK---SGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 334 TKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF--- 390
K I +ND +G L++ Q E V + + A+ + A + V + +
Sbjct: 324 AK--ITVGNPRNDAVRMGSLVSREQYENVLAGIA-ALREEAVLAYDSSAVPLIDADANIA 380
Query: 391 --FAPTILTNITPD--MLCYTEEVFGPVAVCIKFKT--------EEESLCVANNSNTGLA 438
AP + PD L + EVFGPVA ++ E ++ +A L
Sbjct: 381 ACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLV 440
Query: 439 GYFFTNDISQAWRVGKKL--QVGMVGINEGIISHTEAAFGGV 478
++ND + R+ +L G V + H++ G V
Sbjct: 441 ASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 131/342 (38%), Gaps = 40/342 (11%)
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQI-PKGVL 223
GV I +NFP + K APAL +G ++K I P G L
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 210
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS--QGIKRLSLELGGNAP 281
+++ S S G LL +SFTGS L +H + Q RL++E
Sbjct: 211 SIICGS-----SAG-LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 264
Query: 282 FIVYSNAN--------LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI 333
I+ ++A K V M K GQ C A R + E + +E LK ++
Sbjct: 265 AILCADATPDTPAFDLFIKEVVREMTVK---SGQKCTAIRRAFVPEAALEPVLEALKAKL 321
Query: 334 TKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF--- 390
K I +ND +G L++ Q E V + + A+ + A + V + +
Sbjct: 322 AK--ITVGNPRNDAVRMGSLVSREQYENVLAGIA-ALREEAVLAYDSSAVPLIDADANIA 378
Query: 391 --FAPTILTNITPD--MLCYTEEVFGPVAVCIKFKT--------EEESLCVANNSNTGLA 438
AP + PD L + EVFGPVA ++ E ++ +A L
Sbjct: 379 ACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLV 438
Query: 439 GYFFTNDISQAWRVGKKL--QVGMVGINEGIISHTEAAFGGV 478
++ND + R+ +L G V + H++ G V
Sbjct: 439 ASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 480
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 131/342 (38%), Gaps = 40/342 (11%)
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQI-PKGVL 223
GV I +NFP + K APAL +G ++K I P G L
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS--QGIKRLSLELGGNAP 281
+++ S S G LL +SFTGS L +H + Q RL++E
Sbjct: 213 SIICGS-----SAG-LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 266
Query: 282 FIVYSNAN--------LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI 333
I+ ++A K V M K GQ C A R + E + +E LK ++
Sbjct: 267 AILCADATPDTPAFDLFIKEVVREMTVK---SGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 334 TKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF--- 390
K I +ND +G L++ Q E V + + A+ + A + V + +
Sbjct: 324 AK--ITVGNPRNDAVRMGSLVSREQYENVLAGIA-ALREEAVLAYDSSAVPLIDADANIA 380
Query: 391 --FAPTILTNITPD--MLCYTEEVFGPVAVCIKFKT--------EEESLCVANNSNTGLA 438
AP + PD L + EVFGPVA ++ E ++ +A L
Sbjct: 381 ACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLV 440
Query: 439 GYFFTNDISQAWRVGKKL--QVGMVGINEGIISHTEAAFGGV 478
++ND + R+ +L G V + H++ G V
Sbjct: 441 ASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 131/342 (38%), Gaps = 40/342 (11%)
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQI-PKGVL 223
GV I +NFP + K APAL +G ++K I P G L
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS--QGIKRLSLELGGNAP 281
+++ S S G LL +SFTGS L +H + Q RL+++
Sbjct: 213 SIICGS-----SAG-LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNS 266
Query: 282 FIVYSNAN--------LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI 333
I+ ++A K V M K GQ C A R + E + +E LK ++
Sbjct: 267 AILCADATPDTPAFDLFIKEVVREMTVK---SGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 334 TKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF--- 390
K I +ND +G L++ Q E V + + A+ + A + V + +
Sbjct: 324 AK--ITVGNPRNDAVRMGSLVSREQYENVLAGIA-ALREEAVLAYDSSAVPLIDADANIA 380
Query: 391 --FAPTILTNITPD--MLCYTEEVFGPVAVCIKFKT--------EEESLCVANNSNTGLA 438
AP + PD L + EVFGPVA ++ E ++ +A L
Sbjct: 381 ACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLV 440
Query: 439 GYFFTNDISQAWRVGKKL--QVGMVGINEGIISHTEAAFGGV 478
++ND + R+ +L G V + H++ G V
Sbjct: 441 ASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 130/342 (38%), Gaps = 40/342 (11%)
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXXXXXXXQI-PKGVL 223
GV I +NFP + K APAL +G ++K I P G L
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS--QGIKRLSLELGGNAP 281
+++ S S G LL +SFTGS L +H + Q RL++E
Sbjct: 213 SIICGS-----SAG-LLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNS 266
Query: 282 FIVYSNAN--------LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI 333
I+ ++A K V M K GQ A R + E + +E LK ++
Sbjct: 267 AILCADATPDTPAFDLFIKEVVREMTVK---SGQKATAIRRAFVPEAALEPVLEALKAKL 323
Query: 334 TKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF--- 390
K I +ND +G L++ Q E V + + A+ + A + V + +
Sbjct: 324 AK--ITVGNPRNDAVRMGSLVSREQYENVLAGIA-ALREEAVLAYDSSAVPLIDADANIA 380
Query: 391 --FAPTILTNITPD--MLCYTEEVFGPVAVCIKFKT--------EEESLCVANNSNTGLA 438
AP + PD L + EVFGPVA ++ E ++ +A L
Sbjct: 381 ACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLV 440
Query: 439 GYFFTNDISQAWRVGKKL--QVGMVGINEGIISHTEAAFGGV 478
++ND + R+ +L G V + H++ G V
Sbjct: 441 ASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR-TYGE 146
+R +L+ ELE + E+ P GE+ + + F++ +Y +
Sbjct: 53 KRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQ 112
Query: 147 LV---PSPVKSK----ELLMVREPLGVVGLITPWNFPMAMITR--KVAPALAAGCTCVIK 197
+ P+P ++ ++ + LG V + NFP+A A ALAAGC ++K
Sbjct: 113 AILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVK 172
Query: 198 XXXXXXXXXXXXX----XXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTG 253
Q+P+ + ++ + N ++G+ L + P + + FTG
Sbjct: 173 GHTAHPGTSQIVAECIEQALKQEQLPQAIFTLL---QGNQRALGQALVSHPEIKAVGFTG 229
Query: 254 STQVGKILYSHCSQGIKRLSL--ELGGNAPFIVYSNANLQKA--VSGAMAAKFRNCGQAC 309
S G+ L++ + + + ELG P ++ +A KA +A+ CGQ C
Sbjct: 230 SVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFC 289
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 153/374 (40%), Gaps = 39/374 (10%)
Query: 56 LADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQES 115
L D +++V+ I SA +A ++ + + ++ ++K G ++ LA++ +E+
Sbjct: 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEET 62
Query: 116 GKPP-TESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWN 174
G + + + V+A+ V + ++ +T G L K+++ V PLGVV + P
Sbjct: 63 GFGIWQDKVIKNVFASKHVYNYIKD-MKTIGMLKED--NEKKVMEVAVPLGVVAGLIPST 119
Query: 175 FPMAMITRKVAPALAAGCTCVI----KXXXXXXXXXXXXXXXXXXXQIPKGVLNVVTSSR 230
P + + K ++ AG + V PKG ++ +T
Sbjct: 120 NPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPT 179
Query: 231 TNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELG-GNAPFIVYSNAN 289
L A I TG + + K YS + I +G GN P + +AN
Sbjct: 180 IQGTD---QLMKHKDTAVILATGGSAMVKAAYSSGTPAIG-----VGPGNGPAFIERSAN 231
Query: 290 LQKAVSGAMAAKFRNCGQACVAANRFLIQ----EQVFDQF--------VEMLKVEITKSF 337
+ +AV + +K + G C + +++ E V +F + V++ K
Sbjct: 232 IPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFI 291
Query: 338 IQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILT 397
++ + S N P I V+ + ++ + A+V++ + TK+G+K P
Sbjct: 292 LRPNGSMN------PAIVGKSVQHIANLAGLTVPADARVLI--AEETKVGAKI--PYSRE 341
Query: 398 NITPDMLCYTEEVF 411
+ P + YT E +
Sbjct: 342 KLAPILAFYTAETW 355
>pdb|3EPN|A Chain A, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Imidazole Ribonucleotide
pdb|3EPN|B Chain B, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Imidazole Ribonucleotide
pdb|3EPO|A Chain A, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Hmp-P
pdb|3EPO|B Chain B, Crystal Structure Of Caulobacter Crescentus Thic Complexed
With Hmp-P
Length = 612
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVS--GAMAAKFRNCGQACVAANRFLIQ 318
L C QG+ ++ G PFI + + VS G++ AK+ C+A ++
Sbjct: 299 LIEQCEQGVDYFTIHAGVRLPFIPMTAKRVTGIVSRGGSIMAKW------CLAHHKENFL 352
Query: 319 EQVFDQFVEMLKVEITKSFIQGD-------TSKNDKCNLGPLINLAQVEKVDSIVQDAIS 371
+ FD+ E+++ SF GD ND+ L L ++ KV A
Sbjct: 353 YERFDEICEIMRA-YDVSFSLGDGLRPGSTADANDEAQFSELRTLGELTKV------AWK 405
Query: 372 KGAKVILGG 380
G +V++ G
Sbjct: 406 HGVQVMIEG 414
>pdb|4GR8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470c
Length = 152
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 13 PDMNREDVDYAI---RKAFQVWSNVTP 36
>pdb|1RMZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor Nngh At 1.3 A Resolution
pdb|2HU6|A Chain A, Crystal Structure Of Human Mmp-12 In Complex With
Acetohydroxamic Acid And A Bicyclic Inhibitor
pdb|2OXU|A Chain A, Uninhibited Form Of Human Mmp-12
pdb|2OXW|A Chain A, Human Mmp-12 Complexed With The Peptide Iag
pdb|2OXZ|A Chain A, Human Mmp-12 In Complex With Two Peptides Pqg And Iag
pdb|1YCM|A Chain A, Solution Structure Of Matrix Metalloproteinase 12
(Mmp12) In The Presence Of N-Isobutyl-N-[4-
Methoxyphenylsulfonyl]glycyl Hydroxamic Acid (Nngh)
pdb|1Z3J|A Chain A, Solution Structure Of Mmp12 In The Presence Of
N-Isobutyl-N- 4-Methoxyphenylsulfonyl]glycyl Hydroxamic
Acid (Nngh)
pdb|1Y93|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With Acetohydroxamic Acid At Atomic
Resolution
pdb|3LIK|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
pdb|3LIL|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
pdb|3LIR|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
pdb|3LJG|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
pdb|3TS4|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
pdb|3TSK|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
pdb|4EFS|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
pdb|4GQL|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470.1
pdb|4GR0|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470b
pdb|4GR3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470a
Length = 159
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 19 PDMNREDVDYAI---RKAFQVWSNVTP 42
>pdb|1ROS|A Chain A, Crystal Structure Of Mmp-12 Complexed To
2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
pdb|1ROS|B Chain B, Crystal Structure Of Mmp-12 Complexed To
2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
Length = 163
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 18 PDMNREDVDYAI---RKAFQVWSNVTP 41
>pdb|1UTT|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-
(1,3-Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl)ethyl-4-
(4-Ethoxy[1,1-Biphenyl]-4-Yl)-4-Oxobutanoic Acid
pdb|1UTZ|A Chain A, Crystal Structure Of Mmp-12 Complexed To
(2r)-3-({[4-[(Pyri
Din-4-Yl)phenyl]-Thien-2-
Yl}carboxamido)(Phenyl)propanoic Acid
pdb|1UTZ|B Chain B, Crystal Structure Of Mmp-12 Complexed To
(2r)-3-({[4-[(Pyri
Din-4-Yl)phenyl]-Thien-2-
Yl}carboxamido)(Phenyl)propanoic Acid
Length = 159
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 18 PDMNREDVDYAI---RKAFQVWSNVTP 41
>pdb|1OS2|A Chain A, Ternary Enzyme-Product-Inhibitor Complexes Of Human
Mmp12
pdb|1OS2|B Chain B, Ternary Enzyme-Product-Inhibitor Complexes Of Human
Mmp12
pdb|1OS2|C Chain C, Ternary Enzyme-Product-Inhibitor Complexes Of Human
Mmp12
pdb|1OS2|D Chain D, Ternary Enzyme-Product-Inhibitor Complexes Of Human
Mmp12
pdb|1OS2|E Chain E, Ternary Enzyme-Product-Inhibitor Complexes Of Human
Mmp12
pdb|1OS2|F Chain F, Ternary Enzyme-Product-Inhibitor Complexes Of Human
Mmp12
pdb|1OS9|A Chain A, Binary Enzyme-Product Complexes Of Human Mmp12
pdb|1OS9|B Chain B, Binary Enzyme-Product Complexes Of Human Mmp12
pdb|1OS9|C Chain C, Binary Enzyme-Product Complexes Of Human Mmp12
pdb|1OS9|D Chain D, Binary Enzyme-Product Complexes Of Human Mmp12
pdb|1OS9|E Chain E, Binary Enzyme-Product Complexes Of Human Mmp12
pdb|1OS9|F Chain F, Binary Enzyme-Product Complexes Of Human Mmp12
Length = 165
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 20 PDMNREDVDYAI---RKAFQVWSNVTP 43
>pdb|1JK3|A Chain A, Crystal Structure Of Human Mmp-12 (Macrophage Elastase)
At True Atomic Resolution
Length = 158
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 18 PDMNREDVDYAI---RKAFQVWSNVTP 41
>pdb|1JIZ|A Chain A, Crystal Structure Analysis Of Human Macrophage Elastase
Mmp- 12
pdb|1JIZ|B Chain B, Crystal Structure Analysis Of Human Macrophage Elastase
Mmp- 12
Length = 166
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 25 PDMNREDVDYAI---RKAFQVWSNVTP 48
>pdb|2WO8|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO8|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO8|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO8|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO9|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO9|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO9|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WO9|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WOA|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WOA|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WOA|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
pdb|2WOA|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
Length = 164
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 19 PDMNREDVDYAI---RKAFQVWSNVTP 42
>pdb|2W0D|A Chain A, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
pdb|2W0D|B Chain B, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
pdb|2W0D|C Chain C, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
pdb|2W0D|D Chain D, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
pdb|3UVC|A Chain A, Mmp12 In A Complex With The Dimeric Adduct:
5-(5-Phenylhydantoin)-5- Phenylhydantoin
pdb|3UVC|B Chain B, Mmp12 In A Complex With The Dimeric Adduct:
5-(5-Phenylhydantoin)-5- Phenylhydantoin
Length = 164
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 19 PDMNREDVDYAI---RKAFQVWSNVTP 42
>pdb|3F15|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
(S)-N-(2,3-Dihydroxypropyl)-4-
Methoxy-N-(2-Nitroso-2-Oxoethyl)benzenesulfonamide
pdb|3F16|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
(R)-N-(3-Hydroxy-1-Nitroso-1-
Oxopropan-2-Yl)-4-Methoxybenzenesulfonamide
pdb|3F17|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
Biphenyl-4-Sulfonamide
pdb|3F18|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
4-Fluoro-N-(2-Hydroxyethyl)-N-
(2-Nitroso-2-Oxoethyl)benzenesulfonamide
pdb|3F19|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor 4-Fluoro-N-(2-Nitroso-2-
Oxoethyl)benzenesulfonamide
pdb|3F1A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
Benzenesulfonamide
pdb|3EHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor (R)-2-(Biphenyl-4-
Ylsulfonamido)-4-Methylpentanoic Acid
pdb|3EHY|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor (R)-2-(4-
Methoxyphenylsulfonamido)propanoic Acid
pdb|3LKA|A Chain A, Catalytic Domain Of Human Mmp-12 Complexed With
Hydroxamic Acid And Paramethoxy-Sulfonyl Amide
pdb|3NX7|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(N-(2-Hydroxyethyl)4-
Methoxyphenylsulfonamido)acetamide
pdb|3LK8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
Paramethoxy-Sulfonyl-Glycine Hydroxamate
pdb|3N2U|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(4-Methoxy-N(2-(3,4,5-Trihydroxy-6-
(Hydroxymethyl)tetrahydro-2h-Pyran-2-
Yloxy)ethyl)phenylsulfonamido) Acetamide
pdb|3N2V|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(N-Hydroxyethyl)biphenyl-4-
Ylsulfonamido)acetamide
pdb|3RTS|A Chain A, Human Mmp-12 Catalytic Domain In Complex
WithN-Hydroxy-2-(2- Phenylethylsulfonamido)acetamide
pdb|3RTT|A Chain A, Human Mmp-12 Catalytic Domain In Complex
With(R)-N-Hydroxy-1-
(Phenethylsulfonyl)pyrrolidine-2-Carboxamide
pdb|4GUY|A Chain A, Human Mmp12 Catalytic Domain In Complex
WithN-Hydroxy-2-(2-(4-
Methoxyphenyl)ethylsulfonamido)acetamide
Length = 158
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 18 PDMNREDVDYAI---RKAFQVWSNVTP 41
>pdb|2K9C|A Chain A, Paramagnetic Shifts In Solid-State Nmr Of Proteins To
Elicit Structural Information
pdb|2KRJ|A Chain A, High-Resolution Solid-State Nmr Structure Of A 17.6 Kda
Prot
Length = 152
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 12 PDMNREDVDYAI---RKAFQVWSNVTP 35
>pdb|2K2G|A Chain A, Solution Structure Of The Wild-Type Catalytic Domain Of
Human Matrix Metalloproteinase 12 (Mmp-12) In Complex
With A Tight-Binding Inhibitor
Length = 165
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 25 PDMNREDVDYAI---RKAFQVWSNVTP 48
>pdb|2POJ|A Chain A, Nmr Solution Structure Of The Inhibitor-Free State Of
Macrophage Metalloelastase (Mmp-12)
Length = 164
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 24 PDMNREDVDYAI---RKAFQVWSNVTP 47
>pdb|2Z2D|A Chain A, Solution Structure Of Human Macrophage Elastase (Mmp-12)
Catalytic Domain Complexed With A Gamma-Keto Butanoic
Acid Inhibitor
Length = 164
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 24 PDMNREDVDYAI---RKAFQVWSNVTP 47
>pdb|3BA0|A Chain A, Crystal Structure Of Full-Length Human Mmp-12
Length = 365
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 59 VPDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 17 TPDMNREDVDYAI---RKAFQVWSNVTP 41
>pdb|3EPM|A Chain A, Crystal Structure Of Caulobacter Crescentus Thic
pdb|3EPM|B Chain B, Crystal Structure Of Caulobacter Crescentus Thic
Length = 612
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVS--GAMAAKFRNCGQACVAANRFLIQ 318
L C QG+ ++ G PFI + + VS G++ AK+ C+A ++
Sbjct: 299 LIEQCEQGVDYFTIHAGVRLPFIPXTAKRVTGIVSRGGSIXAKW------CLAHHKENFL 352
Query: 319 EQVFDQFVEMLKVEITKSFIQGD-------TSKNDKCNLGPLINLAQVEKV 362
+ FD+ E+ + SF GD ND+ L L ++ KV
Sbjct: 353 YERFDEICEIXRA-YDVSFSLGDGLRPGSTADANDEAQFSELRTLGELTKV 402
>pdb|3M5W|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni
pdb|3M5W|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni
pdb|3TZL|A Chain A, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni Complexed With Adp And Tryptophane
pdb|3TZL|B Chain B, Crystal Structure Of Tryptophanyl-Trna Synthetase From
Campylobacter Jejuni Complexed With Adp And Tryptophane
Length = 322
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELL 158
+Y N V+ + +EAR Y EL+ P KE+L
Sbjct: 267 IYLNELVNAYFKEAREKYNELLEKPSHLKEIL 298
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,468,549
Number of Sequences: 62578
Number of extensions: 598083
Number of successful extensions: 1900
Number of sequences better than 100.0: 114
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1394
Number of HSP's gapped (non-prelim): 120
length of query: 507
length of database: 14,973,337
effective HSP length: 103
effective length of query: 404
effective length of database: 8,527,803
effective search space: 3445232412
effective search space used: 3445232412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)