Query psy3132
Match_columns 507
No_of_seqs 242 out of 1823
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 17:15:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 6E-113 2E-117 898.1 51.9 474 25-504 2-482 (490)
2 3ifg_A Succinate-semialdehyde 100.0 5E-109 2E-113 869.9 51.5 470 29-504 12-483 (484)
3 3ek1_A Aldehyde dehydrogenase; 100.0 2E-108 6E-113 868.1 52.2 469 29-505 32-502 (504)
4 3ed6_A Betaine aldehyde dehydr 100.0 3E-108 1E-112 869.0 54.0 474 26-504 29-509 (520)
5 3rh9_A Succinate-semialdehyde 100.0 4E-108 1E-112 865.4 51.8 473 27-505 9-484 (506)
6 4f3x_A Putative aldehyde dehyd 100.0 4E-108 1E-112 864.9 48.7 472 26-504 22-496 (498)
7 3k2w_A Betaine-aldehyde dehydr 100.0 2E-107 8E-112 860.3 50.4 474 27-505 10-488 (497)
8 2o2p_A Formyltetrahydrofolate 100.0 4E-107 1E-111 859.9 52.1 470 30-505 37-517 (517)
9 3jz4_A Succinate-semialdehyde 100.0 1E-106 4E-111 853.5 54.9 472 28-505 8-481 (481)
10 4e4g_A Methylmalonate-semialde 100.0 3E-107 9E-112 862.2 50.1 489 6-505 8-505 (521)
11 3u4j_A NAD-dependent aldehyde 100.0 7E-107 2E-111 860.3 52.6 472 28-504 21-497 (528)
12 3iwj_A Putative aminoaldehyde 100.0 1E-106 4E-111 855.9 53.6 473 27-504 5-488 (503)
13 3qan_A 1-pyrroline-5-carboxyla 100.0 2E-106 6E-111 859.1 53.0 490 7-504 10-515 (538)
14 3prl_A NADP-dependent glyceral 100.0 3E-106 1E-110 852.0 53.9 465 28-504 10-482 (505)
15 1a4s_A ALDH, betaine aldehyde 100.0 3E-106 9E-111 852.7 51.2 470 28-504 18-495 (503)
16 3i44_A Aldehyde dehydrogenase; 100.0 7E-106 2E-110 847.8 52.7 466 29-503 25-496 (497)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 1E-105 4E-110 850.0 54.0 470 29-504 26-504 (515)
18 1bxs_A Aldehyde dehydrogenase; 100.0 1E-105 4E-110 847.0 53.3 468 30-504 21-495 (501)
19 2imp_A Lactaldehyde dehydrogen 100.0 1E-105 3E-110 845.8 51.9 469 30-504 7-478 (479)
20 3r31_A BADH, betaine aldehyde 100.0 2E-106 8E-111 854.1 47.3 467 28-504 13-487 (517)
21 1wnd_A Putative betaine aldehy 100.0 8E-106 3E-110 846.7 50.4 470 27-504 21-494 (495)
22 1o04_A Aldehyde dehydrogenase, 100.0 7E-106 2E-110 848.1 49.8 467 31-504 21-494 (500)
23 3b4w_A Aldehyde dehydrogenase; 100.0 1E-105 5E-110 845.8 48.8 467 30-504 9-481 (495)
24 3pqa_A Lactaldehyde dehydrogen 100.0 3E-105 1E-109 840.3 51.1 457 32-504 2-463 (486)
25 2ve5_A BADH, betaine aldehyde 100.0 4E-105 2E-109 843.7 52.3 472 27-504 4-482 (490)
26 2w8n_A Succinate-semialdehyde 100.0 3E-105 1E-109 842.1 48.4 471 29-505 12-486 (487)
27 3ros_A NAD-dependent aldehyde 100.0 1E-104 4E-109 835.8 49.9 452 45-504 6-457 (484)
28 3r64_A NAD dependent benzaldeh 100.0 2E-104 7E-109 840.2 51.8 468 27-504 10-484 (508)
29 1euh_A NADP dependent non phos 100.0 2E-104 7E-109 834.8 51.5 464 30-505 5-474 (475)
30 4dng_A Uncharacterized aldehyd 100.0 2E-104 6E-109 837.9 51.1 469 28-505 5-478 (485)
31 2j6l_A Aldehyde dehydrogenase 100.0 1E-104 4E-109 840.1 49.5 470 28-504 22-498 (500)
32 1uzb_A 1-pyrroline-5-carboxyla 100.0 4E-104 1E-108 839.1 53.6 491 6-504 9-515 (516)
33 1t90_A MMSDH, probable methylm 100.0 4E-104 1E-108 834.2 50.7 472 27-505 3-480 (486)
34 1uxt_A Glyceraldehyde-3-phosph 100.0 2E-104 8E-109 837.5 47.4 464 29-504 18-491 (501)
35 3ty7_A Putative aldehyde dehyd 100.0 1E-103 5E-108 829.9 46.8 464 29-503 7-475 (478)
36 3etf_A Putative succinate-semi 100.0 3E-102 1E-106 816.3 53.2 456 43-506 7-462 (462)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 1E-101 5E-106 822.9 51.2 482 16-504 46-550 (563)
38 3ju8_A Succinylglutamic semial 100.0 9E-100 3E-104 801.9 51.6 460 30-504 6-470 (490)
39 4h7n_A Aldehyde dehydrogenase; 100.0 4E-100 1E-104 802.2 48.2 453 43-504 6-462 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 1.1E-99 4E-104 849.7 52.7 491 7-504 504-1009(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 2.1E-98 7E-103 799.3 47.4 464 30-503 8-517 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 1.2E-96 4E-101 772.1 48.7 442 45-504 8-456 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 1.4E-95 5E-100 764.5 47.7 428 61-504 14-447 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 3.5E-95 1.2E-99 773.6 42.3 472 6-501 8-514 (528)
45 3haz_A Proline dehydrogenase; 100.0 3.6E-91 1.2E-95 779.3 50.9 463 5-504 515-986 (1001)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 1.5E-91 5.1E-96 742.7 43.9 438 45-502 9-480 (510)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 1.5E-84 5.1E-89 679.4 28.4 405 46-505 10-435 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 7.4E-82 2.5E-86 661.5 30.4 418 57-504 4-448 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 2.8E-82 9.4E-87 663.2 24.6 394 66-504 15-439 (468)
50 1o20_A Gamma-glutamyl phosphat 100.0 5.5E-80 1.9E-84 640.2 29.6 388 64-505 13-422 (427)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1.3E-79 4.4E-84 640.6 31.7 388 64-504 25-438 (444)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.6E-76 5.6E-81 619.0 28.7 410 59-504 1-448 (452)
53 4gic_A HDH, histidinol dehydro 97.6 0.031 1E-06 55.8 26.0 259 152-501 118-399 (423)
54 1kae_A HDH, histidinol dehydro 97.2 0.08 2.7E-06 53.0 23.3 256 153-501 113-392 (434)
55 2fiu_A Conserved hypothetical 70.4 9.5 0.00032 29.9 6.1 61 354-435 15-76 (99)
56 3lo3_A Uncharacterized conserv 48.4 42 0.0015 25.7 6.2 62 354-436 14-76 (94)
57 3v42_A Folliculin; tumor suppr 45.5 21 0.00072 32.5 4.5 70 181-261 21-90 (226)
58 1b93_A Protein (methylglyoxal 43.1 28 0.00095 29.6 4.7 115 165-306 12-135 (152)
59 3hhl_A RPA0582; alpha-beta-bar 39.2 46 0.0016 27.9 5.4 66 353-436 45-111 (143)
60 2xw6_A MGS, methylglyoxal synt 33.8 11 0.00038 31.3 0.7 79 182-273 22-109 (134)
61 1s7i_A Hypothetical protein PA 33.7 1.6E+02 0.0054 23.8 7.7 74 357-436 30-108 (124)
62 3fgh_A Transcription factor A, 30.6 1.1E+02 0.0036 21.4 5.5 36 73-108 29-64 (67)
63 2yvq_A Carbamoyl-phosphate syn 28.3 30 0.001 28.9 2.5 64 210-276 60-132 (143)
64 2co9_A Thymus high mobility gr 26.4 1.5E+02 0.0053 22.7 6.3 42 74-115 49-90 (102)
65 1vmd_A MGS, methylglyoxal synt 24.5 33 0.0011 29.9 2.0 119 161-306 23-151 (178)
66 2eqz_A High mobility group pro 24.1 1.5E+02 0.005 22.0 5.5 36 73-108 48-83 (86)
67 1use_A VAsp, vasodilator-stimu 20.5 75 0.0026 20.8 2.6 27 90-116 14-40 (45)
68 1b4b_A Arginine repressor; cor 20.4 1.5E+02 0.0052 21.2 4.7 36 190-229 12-47 (71)
69 2ixa_A Alpha-N-acetylgalactosa 20.4 4.2E+02 0.014 26.2 9.8 85 185-275 36-121 (444)
70 2zfz_A Arginine repressor; DNA 20.3 1.6E+02 0.0054 21.6 4.9 36 190-229 20-55 (79)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.1e-113 Score=898.05 Aligned_cols=474 Identities=34% Similarity=0.558 Sum_probs=449.1
Q ss_pred hccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHh
Q psy3132 25 CLSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEG 102 (507)
Q Consensus 25 ~~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~ 102 (507)
.++...++||||+|+++.++ ++++||+||+++++++.++.+|+++|+++|++||+.|+++++++|.++|+++++.|++
T Consensus 2 ~~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 45667789999999976543 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 103 NKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 103 ~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
++++|++++++|+|||+.+++. |+..+++.++||+++++++.+...+. .++...+++++|+|||++|+|||||+.+.+
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~ 160 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchhhh
Confidence 9999999999999999999985 69999999999999998877655443 346678899999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|
T Consensus 161 ~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~---g~~~g~~L~~~p~v~~I~FTGS~~~G~~i 237 (490)
T 2wme_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCC---hHHHHHHHHhCCCCCEEEEECChHHHHHH
Confidence 999999999999999999999999999999999999999999999985 67899999999999999999999999988
Q ss_pred HH-hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 262 YS-HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 262 ~~-~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
.+ .+++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 238 ~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~vG 316 (490)
T 2wme_A 238 MASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQR-IRLG 316 (490)
T ss_dssp HHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBS
T ss_pred HHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHh-CcCC
Confidence 76 556789999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEe
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVC 417 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 417 (507)
+|.+++ +++||++++.+++++.++|++++.+|+++++||..... .+|+|++|||+.+++++|++++||+||||++|
T Consensus 317 dp~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 395 (490)
T 2wme_A 317 DPQDEN-TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSI 395 (490)
T ss_dssp CTTSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCcccc-CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEE
Confidence 999999 99999999999999999999999999999999986542 25899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchh
Q psy3132 418 IKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497 (507)
Q Consensus 418 ~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~ 497 (507)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+||++|++||++||+
T Consensus 396 ~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~ 475 (490)
T 2wme_A 396 LVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTR 475 (490)
T ss_dssp EEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999877777889999999999999999999999999
Q ss_pred ceEEEec
Q psy3132 498 IKYMCFG 504 (507)
Q Consensus 498 ~k~v~~~ 504 (507)
.|+|+++
T Consensus 476 ~K~v~i~ 482 (490)
T 2wme_A 476 IKSVQVE 482 (490)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 9999875
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=4.6e-109 Score=869.94 Aligned_cols=470 Identities=48% Similarity=0.885 Sum_probs=448.9
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975433 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.|+..+++.++|++..+++..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999888766655443335678899999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~---~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGD---PKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCC---CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999974 6789999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 249 ~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 327 (484)
T 3ifg_A 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSK-LKVGRGTESG 327 (484)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTSTT
T ss_pred ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.+++++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 328 -~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (484)
T 3ifg_A 328 -ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHAL-GHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEEL 405 (484)
T ss_dssp -CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTT-CTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred -CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCC-CCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999987543 6999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 406 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 406 VRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999766678999999999999999999999999999999764
No 3
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.7e-108 Score=868.09 Aligned_cols=469 Identities=48% Similarity=0.858 Sum_probs=448.7
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.+++++|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999986433 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.|+..+++.++|++.++++..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988776655444345677899999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~---~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGK---AREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCC---CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999974 6789999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 347 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKE-LKVGNGTEPG 347 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHT-CCBSCTTSTT
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhh-cccCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.+++++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 348 -~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 423 (504)
T 3ek1_A 348 -VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL---GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEV 423 (504)
T ss_dssp -CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred -CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC---CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999862 5999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 424 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 424 IAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999999988777788999999999999999999999999999998763
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.3e-108 Score=868.99 Aligned_cols=474 Identities=35% Similarity=0.610 Sum_probs=450.5
Q ss_pred ccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHh--HHhhcCCHHHHHHHHHHHHHHHH
Q psy3132 26 LSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTTPKERGIVLKRWLKELE 101 (507)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~ 101 (507)
.+...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|+
T Consensus 29 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~ 108 (520)
T 3ed6_A 29 KHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIK 108 (520)
T ss_dssp GGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHH
Confidence 3446689999999985433 9999999999999999999999999999999999 89999999999999999999999
Q ss_pred hcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 102 GNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 102 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+++++|++++++|+|||..+++.|+..+++.+++++.+++++.+...+....+...+++++|+|||++|+|||||+.+.+
T Consensus 109 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 109 EHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 99999999999999999999999999999999999999887766544433246678999999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~---~~~~g~~L~~~p~vd~V~FTGS~~vG~~i 265 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGA---GSEVGDVMSGHKEVDLVSFTGGIETGKHI 265 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSC---CTTHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCC---ChHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999985 67899999999999999999999999999
Q ss_pred HHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCC
Q psy3132 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341 (507)
Q Consensus 262 ~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~ 341 (507)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+
T Consensus 266 ~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-l~vG~ 344 (520)
T 3ed6_A 266 MKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK-IKLGN 344 (520)
T ss_dssp HHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTT-CCBCC
T ss_pred HHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHh-ccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeE
Q psy3132 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418 (507)
Q Consensus 342 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 418 (507)
|.+++ +++||++++.+++++.+++++++++|+++++||..... .+|+|++|||+.+++++|++++||+||||++|+
T Consensus 345 p~d~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 423 (520)
T 3ed6_A 345 GFDAD-TEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423 (520)
T ss_dssp TTSTT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CccCC-CcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEE
Confidence 99999 99999999999999999999999999999999986421 269999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 419 KFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 419 ~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.
T Consensus 424 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~ 503 (520)
T 3ed6_A 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVS 503 (520)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred eEEEec
Q psy3132 499 KYMCFG 504 (507)
Q Consensus 499 k~v~~~ 504 (507)
|+|+++
T Consensus 504 k~v~~~ 509 (520)
T 3ed6_A 504 KHILTN 509 (520)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999875
No 5
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.2e-108 Score=865.43 Aligned_cols=473 Identities=40% Similarity=0.667 Sum_probs=450.1
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
+...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENR 88 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 345689999999986433 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEe-ecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++.|+..+++.++++++.++++.+...+.. .+...++++ +|+|||++|+|||||+.+.+++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 167 (506)
T 3rh9_A 89 EEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKK 167 (506)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999999988876544432 456778889 9999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++
T Consensus 168 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~ 244 (506)
T 3rh9_A 168 LSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGK---ASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244 (506)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCC---ChHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999984 6789999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 245 ~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~ 323 (506)
T 3rh9_A 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNK-MTVGDGM 323 (506)
T ss_dssp HTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHH-CCBSCTT
T ss_pred HhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHh-ccCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||...+..+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 324 ~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 324 NDG-IDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp STT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccC-CcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 999 9999999999999999999999999999999998643225999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 403 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 403 EEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999988777889999999999999999999999999999987
Q ss_pred cc
Q psy3132 504 GN 505 (507)
Q Consensus 504 ~~ 505 (507)
+.
T Consensus 483 ~~ 484 (506)
T 3rh9_A 483 GF 484 (506)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 6
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=3.9e-108 Score=864.92 Aligned_cols=472 Identities=31% Similarity=0.533 Sum_probs=450.3
Q ss_pred ccCCcceeECCEeeeCCC-CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 26 LSTYTQAYINGEWVHSSK-KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~-~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
.|...++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.
T Consensus 22 ~~~~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 101 (498)
T 4f3x_A 22 SMMDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEA 101 (498)
T ss_dssp -CCCCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred hccccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 356678999999998766 4999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..++ +.|+..+++.++++++.++++.+...+...++...+++++|+|||++|+|||||+.+.+++
T Consensus 102 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (498)
T 4f3x_A 102 DEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWK 181 (498)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999 8999999999999999988766654433234677899999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 182 ~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~---~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 257 (498)
T 4f3x_A 182 LAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGR---GETVGNALINHPKVGMVSITGDIATGKKVLA 257 (498)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCC---TTTHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCC---chHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999985 6789999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 258 ~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~vG~p~ 336 (498)
T 4f3x_A 258 AAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVST-IRYNLDD 336 (498)
T ss_dssp HHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTT-CCCSCSS
T ss_pred HHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHh-cccCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCC-eEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGA-KVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
+++ +++||++++.+++++.+++++++++|+ ++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 337 d~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 414 (498)
T 4f3x_A 337 DTE-NEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSD-EGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414 (498)
T ss_dssp GGG-CSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCS-SSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT
T ss_pred ccc-CccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCC-CCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC
Confidence 999 999999999999999999999999999 99999986543 699999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 415 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 415 KDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp TSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 495 ~~ 496 (498)
T 4f3x_A 495 IN 496 (498)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 7
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=2.4e-107 Score=860.26 Aligned_cols=474 Identities=32% Similarity=0.578 Sum_probs=448.8
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
+...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK 89 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 345689999999987543 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.+++++..++++.+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 90 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 169 (497)
T 3k2w_A 90 HILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKI 169 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999998887766544433456778999999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 170 ~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~ 246 (497)
T 3k2w_A 170 GPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGT---GSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246 (497)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSC---TTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCC---chHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985 56899999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 247 aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~vg~p~~ 325 (497)
T 3k2w_A 247 SAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKG-LKVGDPMD 325 (497)
T ss_dssp HTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHT-CCBSCTTS
T ss_pred hhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHh-ccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCc--ccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK--VTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFK 421 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 421 (507)
++ +++||++++.+++++.+++++++++|+++++||.. .+. .+|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 326 ~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 326 AD-SQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp TT-CSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CC-CccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99 99999999999999999999999999999999973 221 158999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 422 TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 422 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|
T Consensus 405 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v 484 (497)
T 3k2w_A 405 SMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484 (497)
T ss_dssp CHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999999999887778999999999999999999999999999999
Q ss_pred Eecc
Q psy3132 502 CFGN 505 (507)
Q Consensus 502 ~~~~ 505 (507)
++++
T Consensus 485 ~~~~ 488 (497)
T 3k2w_A 485 YINE 488 (497)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8864
No 8
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4.3e-107 Score=859.90 Aligned_cols=470 Identities=36% Similarity=0.611 Sum_probs=445.1
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46799999997632 399999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSP---VKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+|++++++|+|||..+++ .|+..+++.++|++++++++.+...+.. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999999887766543321 223367899999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~---g~~~g~~L~~~~~v~~V~FTGS~~~G~~I 273 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIGFTGSTEVGKHI 273 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSC---HHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCC---CHHHHHHHHhCCCCCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999984 67889999999999999999999999999
Q ss_pred HHhhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 262 YSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 262 ~~~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 274 ~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~vG 352 (517)
T 2o2p_A 274 MKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEK-MKIG 352 (517)
T ss_dssp HHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTT-CCBS
T ss_pred HHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHh-cCCC
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|.+++ +++||++++.+++++.+++++++++|+++++||+.... .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 353 dp~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 430 (517)
T 2o2p_A 353 NPLERD-TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR-PGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430 (517)
T ss_dssp CTTSTT-CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCCCC-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCC-CCCeECCEEEeCCCCCChhhhccccccEEEEEEc
Confidence 999999 99999999999999999999999999999999986532 5999999999999999999999999999999999
Q ss_pred CC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 421 KT--EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 421 ~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+| +||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.
T Consensus 431 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~ 510 (517)
T 2o2p_A 431 ADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRI 510 (517)
T ss_dssp CTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEE
T ss_pred CCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCc
Confidence 99 9999999999999999999999999999999999999999998766678899999999999999999999999999
Q ss_pred eEEEecc
Q psy3132 499 KYMCFGN 505 (507)
Q Consensus 499 k~v~~~~ 505 (507)
|+|++++
T Consensus 511 k~v~~~~ 517 (517)
T 2o2p_A 511 KTVTFEY 517 (517)
T ss_dssp EEEEEEC
T ss_pred eEEEeeC
Confidence 9998753
No 9
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.1e-106 Score=853.48 Aligned_cols=472 Identities=49% Similarity=0.879 Sum_probs=449.8
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 8 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 87 (481)
T 3jz4_A 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQD 87 (481)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999986433 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 185 (507)
+|++++++|+|||..+++.|+..+++.++|++..+.+..+...+....+...+++++|+|||++|+|||||+.+.+++++
T Consensus 88 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 167 (481)
T 3jz4_A 88 DLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG 167 (481)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999988776655444334567788999999999999999999999999999
Q ss_pred hHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 186 ~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
+||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 168 ~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 168 PALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGS---AGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBC---THHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCC---ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 678999999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.++
T Consensus 245 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~ 323 (481)
T 3jz4_A 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSK-LHIGDGLDN 323 (481)
T ss_dssp TTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTT-CCBSCTTST
T ss_pred hhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHh-ccCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+ +++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 324 ~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 401 (481)
T 3jz4_A 324 G-VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHE-RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEAD 401 (481)
T ss_dssp T-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCT-TCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHH
T ss_pred c-CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeccEEEecCCCCcccccccccCceEEEEEECCHHH
Confidence 9 9999999999999999999999999999999998643 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 402 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 402 VIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp HHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998764
No 10
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.7e-107 Score=862.20 Aligned_cols=489 Identities=25% Similarity=0.444 Sum_probs=446.1
Q ss_pred ccCcccchHHhhHHHHHhhhccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhc
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQ 83 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~ 83 (507)
.+|+|+..+ -.|++.+ |...++||||+|+.+..+ ++++||+||+++++++.++.+|+++|+++|++||+.|+.
T Consensus 8 ~~~~~~~~~---~~~~~s~--m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~ 82 (521)
T 4e4g_A 8 SSGVDLGTE---NLYFQSM--MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAA 82 (521)
T ss_dssp ---------------------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcCch---hhhHhhh--hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhcc
Confidence 357777655 3444444 445689999999986543 999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeec
Q psy3132 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREP 163 (507)
Q Consensus 84 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 163 (507)
++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.++.+.+...+....+...+++++|
T Consensus 83 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P 162 (521)
T 4e4g_A 83 TNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQP 162 (521)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcC
Confidence 99999999999999999999999999999999999999999999999999999998877766543322345678899999
Q ss_pred ccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcC
Q psy3132 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTS 243 (507)
Q Consensus 164 ~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~ 243 (507)
+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.++.|+.|
T Consensus 163 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g----~~~~~~~L~~~ 238 (521)
T 4e4g_A 163 VGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG----DKGAVDAILTH 238 (521)
T ss_dssp CCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC----CHHHHHHHHTC
T ss_pred CcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC----ChHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999997 35667999999
Q ss_pred CCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhh-hH
Q psy3132 244 PHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ-VF 322 (507)
Q Consensus 244 ~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 322 (507)
|+||.|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 239 p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~ 318 (521)
T 4e4g_A 239 PDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETA 318 (521)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHH
T ss_pred CCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc---cCCCceeeceEeecC
Q psy3132 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT---KLGSKFFAPTILTNI 399 (507)
Q Consensus 323 ~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~g~~~~Ptvl~~~ 399 (507)
|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++|+++++||.... ..+|+|++|||+.++
T Consensus 319 d~f~~~l~~~~~~-~~vG~~~~~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v 396 (521)
T 4e4g_A 319 NRLIDKLVPMVES-LRIGPYTDEK-ADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396 (521)
T ss_dssp HHHHHHHHHHHHT-CCBCCTTCTT-CSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESC
T ss_pred HHHHHHHHHHHHh-ccCCCCCCcc-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcC
Confidence 9999999999999 9999999999 9999999999999999999999999999999997531 126999999999999
Q ss_pred CCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCC
Q psy3132 400 TPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGV 478 (507)
Q Consensus 400 ~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~ 478 (507)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+
T Consensus 397 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~ 476 (521)
T 4e4g_A 397 TPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGW 476 (521)
T ss_dssp CTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCE
T ss_pred CCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999987654 477999999
Q ss_pred CCCCCC--CCchHHHHHhchhceEEEecc
Q psy3132 479 KESGLG--REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 479 ~~SG~g--~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|.||+| +++|++|+++||+.|+|++++
T Consensus 477 k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 477 KSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp ETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred ccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 999999 789999999999999998864
No 11
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.9e-107 Score=860.34 Aligned_cols=472 Identities=34% Similarity=0.584 Sum_probs=449.5
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHh--HHhhcCCHHHHHHHHHHHHHHHHh
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTTPKERGIVLKRWLKELEG 102 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~~ 102 (507)
...++||||+|+.+..+ ++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 35579999999986543 99999999 99999999999999999999999999 789999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHh
Q psy3132 103 NKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR 182 (507)
Q Consensus 103 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 182 (507)
++++|++++++|+|||..+++.|+..+++.++++++.++++.+...+....+...++.++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999998887665444332466789999999999999999999999999
Q ss_pred hHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 183 ~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGY---GDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCS---STTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCC---cHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999985 678999999999999999999999999999
Q ss_pred HhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 263 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 258 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p 336 (528)
T 3u4j_A 258 EIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRK-VAFGDP 336 (528)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHH-CCEECT
T ss_pred HHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHh-hcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.+++++++++|+++++||......+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 337 ~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 415 (528)
T 3u4j_A 337 LNER-TKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT 415 (528)
T ss_dssp TSTT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCcC-CccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999 999999999999999999999999999999999875322599999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 416 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~ 495 (528)
T 3u4j_A 416 ADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVH 495 (528)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 496 ~~ 497 (528)
T 3u4j_A 496 VT 497 (528)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 12
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.3e-106 Score=855.89 Aligned_cols=473 Identities=35% Similarity=0.604 Sum_probs=448.0
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH-----HhhcCCHHHHHHHHHHHHHH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-----QWSQTTPKERGIVLKRWLKE 99 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~ 99 (507)
+...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 345689999999976543 99999999999999999999999999999999999 99999999999999999999
Q ss_pred HHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccc-c--CCCCCceeEEEeecccEEEEEcCCccc
Q psy3132 100 LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV-P--SPVKSKELLMVREPLGVVGLITPWNFP 176 (507)
Q Consensus 100 l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P 176 (507)
|++++++|++++++|+|||..+++.|+..+++.+++++.+++++.+... + ....+...++.++|+|||++|+|||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999999999999999999999999887655331 1 112356789999999999999999999
Q ss_pred HHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHH
Q psy3132 177 MAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQ 256 (507)
Q Consensus 177 ~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~ 256 (507)
+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~g~~L~~~~~v~~I~FTGS~~ 241 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGL---GPEAGAPLATHPDVDKVAFTGSSA 241 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---HHHHTHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCC---cHHHHHHHhhCCCccEEEEECcHH
Confidence 99999999999999999999999999999999999999999999999999984 678899999999999999999999
Q ss_pred HHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhc
Q psy3132 257 VGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKS 336 (507)
Q Consensus 257 ~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 336 (507)
+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 242 ~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~- 320 (503)
T 3iwj_A 242 TGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKN- 320 (503)
T ss_dssp HHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccE
Q psy3132 337 FIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVA 415 (507)
Q Consensus 337 ~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl 415 (507)
+++|+|.+++ +++||++++.+++++.+++++++++|+++++||...+. .+|+|++|||+.+++++|++++||+||||+
T Consensus 321 ~~~g~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 399 (503)
T 3iwj_A 321 IKISDPLEEG-CRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVL 399 (503)
T ss_dssp CCBSCTTSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred ccCCCCCCCC-CcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceE
Confidence 9999999999 99999999999999999999999999999999986531 269999999999999999999999999999
Q ss_pred EeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhc
Q psy3132 416 VCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495 (507)
Q Consensus 416 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~ 495 (507)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 400 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f 479 (503)
T 3iwj_A 400 CVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNY 479 (503)
T ss_dssp EEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999776778899999999999999999999999
Q ss_pred hhceEEEec
Q psy3132 496 TQIKYMCFG 504 (507)
Q Consensus 496 t~~k~v~~~ 504 (507)
|+.|+|+++
T Consensus 480 ~~~k~v~~~ 488 (503)
T 3iwj_A 480 LSVKQVTQY 488 (503)
T ss_dssp EEEEEEEEE
T ss_pred hCeEEEEEe
Confidence 999999875
No 13
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.7e-106 Score=859.11 Aligned_cols=490 Identities=28% Similarity=0.461 Sum_probs=459.2
Q ss_pred cCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 7 LGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
-+.|++....++.+.+.+.++ ...++||||+|+.++..++++||+| |+++++++.++.+|+++|+++|++||+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~ 89 (538)
T 3qan_A 10 PFTDFTVEANRKAFEEALGLVEKELGKEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQT 89 (538)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHHHTTEEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCcHHHHHHHHHHHHhhhccCcccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHh
Confidence 467777777777777766553 2557999999998444499999999 9999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHH-HHHhcCccccCCCCCceeEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEE-ARRTYGELVPSPVKSKELLM 159 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (507)
|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++. .+...+...+. ..+...++
T Consensus 90 w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~ 168 (538)
T 3qan_A 90 WRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRY 168 (538)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCC-CTTEEEEE
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-cCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999998 66666654442 23667899
Q ss_pred EeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHh
Q psy3132 160 VREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKL 239 (507)
Q Consensus 160 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~ 239 (507)
.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.
T Consensus 169 ~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~ 245 (538)
T 3qan_A 169 FYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGS---GAEVGDY 245 (538)
T ss_dssp EEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBC---TTTTHHH
T ss_pred ecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecC---CHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985 6788999
Q ss_pred hhcCCCccEEEEeCCHHHHHHHHHhhccc------ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCc
Q psy3132 240 LCTSPHVAGISFTGSTQVGKILYSHCSQG------IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAAN 313 (507)
Q Consensus 240 L~~~~~v~~v~ftGs~~~g~~i~~~~~~~------~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~ 313 (507)
|+.||+||.|+||||+.+|+.|++.++++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 246 L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~ 325 (538)
T 3qan_A 246 LVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGS 325 (538)
T ss_dssp HHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCC
T ss_pred HHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCc
Confidence 99999999999999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred ceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeec
Q psy3132 314 RFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAP 393 (507)
Q Consensus 314 ~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~P 393 (507)
|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++| ++++||..++. .|+|++|
T Consensus 326 rvlV~~~i~d~f~~~l~~~~~~-~~vG~p~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~-~g~~~~P 401 (538)
T 3qan_A 326 RAVIHKDVYDEVLEKTVALAKN-LTVGDPTNRD-NYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSS-TGFFIQP 401 (538)
T ss_dssp EEEEETTTHHHHHHHHHHHHTT-CCBSCTTSTT-CSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECS-SSCEECC
T ss_pred eeEEehHHHHHHHHHHHHHHHh-ccCCCCCCCC-CCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCC-CCceeCC
Confidence 9999999999999999999999 9999999999 99999999999999999999999999 99999987543 5999999
Q ss_pred eEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEc-CCCCC-CC
Q psy3132 394 TILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN-EGIIS-HT 471 (507)
Q Consensus 394 tvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN-~~~~~-~~ 471 (507)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|| ..... .+
T Consensus 402 Tvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~ 481 (538)
T 3qan_A 402 TIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVG 481 (538)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTT
T ss_pred eeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 55443 78
Q ss_pred CCcccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 472 EAAFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 472 ~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
.+||||+|.||+| +++|++||++||+.|+|+++
T Consensus 482 ~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~ 515 (538)
T 3qan_A 482 YHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM 515 (538)
T ss_dssp TSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEE
T ss_pred CCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEe
Confidence 8999999999999 99999999999999999875
No 14
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=3e-106 Score=851.98 Aligned_cols=465 Identities=32% Similarity=0.550 Sum_probs=441.9
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987543 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCC-C----CceeEEEeecccEEEEEcCCcccHHhH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV-K----SKELLMVREPLGVVGLITPWNFPMAMI 180 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 180 (507)
+|++++++|+|||..+++.|+..+++.++++++.++++.+...+... + +...+++++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999998887664433221 2 456789999999999999999999999
Q ss_pred HhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 181 ~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGR---GSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCC---HHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCC---CHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999974 6789999999999999999999999999
Q ss_pred HHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 261 i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 247 i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g 323 (505)
T 3prl_A 247 ISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQ-LTVG 323 (505)
T ss_dssp HHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHH-CCBS
T ss_pred HHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHh-cccC
Confidence 999988 9999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|. ++ +++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~p~-~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~----~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 397 (505)
T 3prl_A 324 SPE-DD-ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR----QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRV 397 (505)
T ss_dssp CTT-TT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred CCC-Cc-CcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCceeCCeEeecCCCCChhhcCCccCcEEEEEEe
Confidence 999 88 99999999999999999999999999999999974 4899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|
T Consensus 398 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k 477 (505)
T 3prl_A 398 KDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477 (505)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred CCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceE
Confidence 999999999999999999999999999999999999999999999876 4678999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 478 ~v~~~ 482 (505)
T 3prl_A 478 VTVLN 482 (505)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 15
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.7e-106 Score=852.70 Aligned_cols=470 Identities=35% Similarity=0.580 Sum_probs=445.8
Q ss_pred CCcceeECCEeeeCC--CC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 28 TYTQAYINGEWVHSS--KK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~--~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
...++||||+|+.+. .. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 345789999999753 45 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.++|++++++++.+...+.. ++...++.++|+|||++|+|||||+.+.++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999888765443322 34567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ + ++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~---~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 252 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGG---A-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCS---H-HHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecC---c-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999974 6 889999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 253 aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~ 331 (503)
T 1a4s_A 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKA-IVVGDPLL 331 (503)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTS
T ss_pred hhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHh-cCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc--cc---CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV--TK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
++ +++||++++.+++++.+++++++++|+++++||+.. +. ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 332 ~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 410 (503)
T 1a4s_A 332 TE-TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLP 410 (503)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cC-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEe
Confidence 99 999999999999999999999999999999999764 11 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 411 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 490 (503)
T 1a4s_A 411 FDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLK 490 (503)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEE
T ss_pred cCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCce
Confidence 99999999999999999999999999999999999999999999997777788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 491 ~v~~~ 495 (503)
T 1a4s_A 491 TVIVE 495 (503)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=6.6e-106 Score=847.78 Aligned_cols=466 Identities=33% Similarity=0.575 Sum_probs=438.1
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.+++++|.++|+++++.|+++.++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999986543 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE-eecccEEEEEcCCcccHHhHHhhH
Q psy3132 107 LAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV-REPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
|++++++|+|||..+++ .|+..+++.++++++........... ..+...+++ ++|+|||++|+|||||+.+.++++
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKV 182 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 89999999999999877654332211 124456777 999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~---~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~ 259 (497)
T 3i44_A 183 IPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGD---GANVGSYLSAHPDLEMISFTGSTRAGKDISKN 259 (497)
T ss_dssp HHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCC---ChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985 67899999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 260 aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~vG~p~~ 337 (497)
T 3i44_A 260 ASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEK-TQVGPGHQ 337 (497)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHH-CCBCCTTS
T ss_pred HhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHh-ccCCCCCC
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCC-cccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG-KVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
++ +++||++++.+++++.++|++++++|+++++||. .... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 338 ~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 416 (497)
T 3i44_A 338 TG-NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT 416 (497)
T ss_dssp CS-SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CC-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC
Confidence 99 9999999999999999999999999999999994 3221 2599999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||. ....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 417 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 417 EDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9999999999999999999999999999999999999999994 445678999999999999999999999999999985
Q ss_pred e
Q psy3132 503 F 503 (507)
Q Consensus 503 ~ 503 (507)
.
T Consensus 496 ~ 496 (497)
T 3i44_A 496 Y 496 (497)
T ss_dssp C
T ss_pred e
Confidence 3
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-105 Score=850.04 Aligned_cols=470 Identities=34% Similarity=0.565 Sum_probs=445.2
Q ss_pred CcceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999997643 2 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.|+..+++.++++++++++..+...+....+...+++++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999888876654443234556789999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa 262 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGF---GEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA 262 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCC---chHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999984 5678999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 263 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~~~ 341 (515)
T 2d4e_A 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARA-IRVGHPLDPE 341 (515)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHH-CCBCCTTSTT
T ss_pred hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhh-cccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-------CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-------LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
+++||++++.+++++.++|++++++|+++++||+.... ..|+|++|||+.+ +++|++++||+||||++|++
T Consensus 342 -~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~ 419 (515)
T 2d4e_A 342 -TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIP 419 (515)
T ss_dssp -CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEE
T ss_pred -CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEe
Confidence 99999999999999999999999999999999976430 1489999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|
T Consensus 420 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K 499 (515)
T 2d4e_A 420 FKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLK 499 (515)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEE
T ss_pred eCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCcee
Confidence 99999999999999999999999999999999999999999999987766788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 500 ~v~~~ 504 (515)
T 2d4e_A 500 TIALP 504 (515)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99875
No 18
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.1e-105 Score=846.98 Aligned_cols=468 Identities=36% Similarity=0.597 Sum_probs=444.0
Q ss_pred cceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 30 TQAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 30 ~~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
.++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 36799999997643 3 99999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..++. .|+..+++.++++++.++++.+...+. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 799999999999999988876654332 23556789999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~---~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~ 256 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGY---GPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHTCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecC---chHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 5678999999999999999999999999999
Q ss_pred hhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 264 HCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 264 ~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 257 ~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p 335 (501)
T 1bxs_A 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKK-YVLGNP 335 (501)
T ss_dssp HHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTC-CCBSCT
T ss_pred HhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHh-cCCCCC
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.+++++++++|+++++||+..+. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 336 ~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (501)
T 1bxs_A 336 LTPG-VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN-KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 413 (501)
T ss_dssp TSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS-SSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cccC-CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCC
Confidence 9999 99999999999999999999999999999999986432 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~ 493 (501)
T 1bxs_A 414 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493 (501)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEE
Confidence 99999999999999999999999999999999999999999987766678999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 494 ~~ 495 (501)
T 1bxs_A 494 IK 495 (501)
T ss_dssp EE
T ss_pred Ec
Confidence 75
No 19
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=9.6e-106 Score=845.78 Aligned_cols=469 Identities=33% Similarity=0.579 Sum_probs=444.7
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997543 2999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
++++++|+|||..+++.|+..+++.++++++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 166 (479)
T 2imp_A 87 SALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPA 166 (479)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877666543332235577899999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|+.|++.+++
T Consensus 167 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 167 LLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGR---GETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECC---cHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999984 56789999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC-CC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK-ND 346 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~-~~ 346 (507)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+ ++
T Consensus 244 ~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~~ 322 (479)
T 2imp_A 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA-VQFGNPAERND 322 (479)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTTCSS
T ss_pred cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHh-cccCCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999 88
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++|||+++.+++++.+++++++++|+++++||+..+. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 323 -~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 323 -IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEG-KGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp -CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCS-SSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred -CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCC-CCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999976322 5899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 401 i~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 401 ISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999999999999999999999998776678899999999999999999999999999999864
No 20
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.4e-106 Score=854.12 Aligned_cols=467 Identities=36% Similarity=0.568 Sum_probs=443.5
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999976543 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHH----hcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR----TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+|++++++|+|||..++ |+..+++.++++++++++ +.+...+. ..+. .+++++|+|||++|+|||||+.+.+
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~ 168 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIAC 168 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHH
Confidence 99999999999999999 999999999999999887 66654442 2345 8999999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.|
T Consensus 169 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g----~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG----DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC----CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC----CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999997 46789999999999999999999999999
Q ss_pred HHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCC
Q psy3132 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341 (507)
Q Consensus 262 ~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~ 341 (507)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+
T Consensus 245 ~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~ 323 (517)
T 3r31_A 245 AAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEA-MILGD 323 (517)
T ss_dssp HHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHH-CCBCC
T ss_pred HHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHh-ccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 342 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
|.+++ +++||++++.+++++.++|++++++|+++++||...+. .+|+|+.|||+.+++++|++++||+||||++|++
T Consensus 324 p~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 324 PLDYA-THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp TTSTT-CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCcC-CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 99999 99999999999999999999999999999999931211 2599999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 483 ~v~~~ 487 (517)
T 3r31_A 483 TVYVS 487 (517)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=8.1e-106 Score=846.68 Aligned_cols=470 Identities=37% Similarity=0.597 Sum_probs=443.9
Q ss_pred cCCcceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 27 STYTQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
+...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 21 ~~~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 21 LMQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp -CCCCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 344578999999976434 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++. |+..+++.++++++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999998877665443322234567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~ 256 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGR---GKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 256 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCC---TTTTHHHHHTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCC---CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999984 56789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 257 aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~ 335 (495)
T 1wnd_A 257 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT-LKSGAPDD 335 (495)
T ss_dssp HGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHT-CCBCCTTS
T ss_pred HHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHh-ccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCC-CeEEeCCC-ccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKG-AKVILGGG-KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
++ +++|||+++.+++++.+++++++++| +++++||. .++ .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 336 ~~-~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (495)
T 1wnd_A 336 ES-TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG--NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 412 (495)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS--SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CC-CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCC--CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999 99999997 532 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 413 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 413 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999987666788999999999999999999999999999997
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 493 ~~ 494 (495)
T 1wnd_A 493 VK 494 (495)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 22
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=7.1e-106 Score=848.10 Aligned_cols=467 Identities=35% Similarity=0.556 Sum_probs=443.2
Q ss_pred ceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 31 QAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 31 ~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5799999997643 3 99999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..++. .|+..+++.++|+++.++++.+...+. ..+...+++++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 699999999999999887766654332 234567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 256 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGF---GPTAGAAIASHEDVDKVAFTGSTEIGRVIQVA 256 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBC---TTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecC---cHHHHHHHHhCCCcCEEEEECCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999985 56789999999999999999999999999999
Q ss_pred hc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 257 aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~ 335 (500)
T 1o04_A 257 AGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS-RVVGNPF 335 (500)
T ss_dssp HHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH-CCBCCTT
T ss_pred hhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHh-CcCCCcc
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 336 ~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 336 DSK-TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD-RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp STT-CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS-SSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccc-CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 999 99999999999999999999999999999999976432 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999877666789999999999999999999999999999987
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 494 ~ 494 (500)
T 1o04_A 494 K 494 (500)
T ss_dssp E
T ss_pred e
Confidence 5
No 23
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-105 Score=845.78 Aligned_cols=467 Identities=33% Similarity=0.573 Sum_probs=442.9
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 36899999997643 399999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++ .|+..+++.++++++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEE-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 899999999999999888776654332 123467899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g----~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~ 243 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG----GIETGQALTSNPDIDMFTFTGSSAVGREVGRR 243 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB----SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC----CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999996 46789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 244 aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~ 322 (495)
T 3b4w_A 244 AAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTA-LPVGPPSD 322 (495)
T ss_dssp HHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHH-SCBCCTTC
T ss_pred hhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHh-cCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
++ +++||++++.+++++.+++++++++|+++++||+.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (495)
T 3b4w_A 323 PA-AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTE 401 (495)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CC-CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCH
Confidence 99 99999999999999999999999999999999976431 14899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 402 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 402 EDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEE
Confidence 99999999999999999999999999999999999999999877 67889999999999999999999999999999987
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 481 ~ 481 (495)
T 3b4w_A 481 P 481 (495)
T ss_dssp C
T ss_pred c
Confidence 5
No 24
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.3e-105 Score=840.29 Aligned_cols=457 Identities=33% Similarity=0.585 Sum_probs=431.6
Q ss_pred eeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHH
Q psy3132 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIM 111 (507)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 111 (507)
+||||+|+.+++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999998766 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcC
Q psy3132 112 TQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAG 191 (507)
Q Consensus 112 ~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaG 191 (507)
++|+|||..+++.|+..+++.++++++.++++.+...+. .+...++.++|+|||++|+|||||+.+.++++++||++|
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999998876654442 256789999999999999999999999999999999999
Q ss_pred CeEEeccCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 192 CTCVIKPAEDTPLTALALAALAHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 192 N~Vvlkps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|+||+|||+.+|+++.++++++.++ |+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~---~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa- 234 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGA---GEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG- 234 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC-
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCC---chHHHHHHHhCCCccEEEEECChHHHHHHHHHcC-
Confidence 9999999999999999999999999 9999999999985 5678999999999999999999999999999887
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~ 347 (507)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 235 -~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~~~- 311 (486)
T 3pqa_A 235 -FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKV-LNVGNPLDEK- 311 (486)
T ss_dssp -SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTSTT-
T ss_pred -CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHh-cccCCCCcCC-
Confidence 8999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHH
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL 427 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 427 (507)
+++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~----~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi 385 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR----DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMI 385 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHH
Confidence 99999999999999999999999999999999975 4899999999 9999999999999999999999999 9999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 428 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+++|+++|||++||||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 386 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 99999999999999999999999999999999999999865 345899999999999999999999999999999875
No 25
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.4e-105 Score=843.66 Aligned_cols=472 Identities=34% Similarity=0.563 Sum_probs=448.3
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
|...++||||+|+.+... ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 456689999999976433 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++. |+..+++.++++++.++++.+...+. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 84 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 162 (490)
T 2ve5_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHHHH
Confidence 99999999999999999996 99999999999999988765544332 24567889999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 163 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~ 239 (490)
T 2ve5_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCC---ChHHHHHHHhCCCcCEEEEeCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 5789999999999999999999999999999
Q ss_pred hh-cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 264 HC-SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 264 ~~-~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
.+ ++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 240 ~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p 318 (490)
T 2ve5_A 240 SASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQR-IRLGDP 318 (490)
T ss_dssp HHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCT
T ss_pred hchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHh-ccCCCC
Confidence 99 8999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
.+++ +++||++++.+++++.+++++++++|+++++||..... .+|+|++|||+.+++++|++++||+||||++|++
T Consensus 319 ~d~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~ 397 (490)
T 2ve5_A 319 QDEN-TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILV 397 (490)
T ss_dssp TSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCC-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEE
Confidence 9999 99999999999999999999999999999999986321 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+.|
T Consensus 398 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k 477 (490)
T 2ve5_A 398 YDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477 (490)
T ss_dssp ESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeE
Confidence 99999999999999999999999999999999999999999999998777788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 478 ~v~~~ 482 (490)
T 2ve5_A 478 SVQVE 482 (490)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99875
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=3.1e-105 Score=842.14 Aligned_cols=471 Identities=52% Similarity=0.929 Sum_probs=446.2
Q ss_pred CcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 29 YTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
..++||||+|+.+...++++||+||+++++++.++.+|++.|+++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 12 ~~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (487)
T 2w8n_A 12 RTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLA 91 (487)
T ss_dssp CCSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ccCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999766349999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.++++++.+++..+...+....+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 92 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (487)
T 2w8n_A 92 RIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAAL 171 (487)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887665444323456778999999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVT---SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~---g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |+ +.++++.|++||+||.|+||||+.+|+.|++.+
T Consensus 172 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~---~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 248 (487)
T 2w8n_A 172 AAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKN---AKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248 (487)
T ss_dssp HHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHH---HHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHH
T ss_pred HcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCC---cHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 74 567899999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++.+++|+|.++
T Consensus 249 a~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~ 328 (487)
T 2w8n_A 249 ANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEE 328 (487)
T ss_dssp HTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753689999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCc-eeeceEeecCCCCCCCcccceeeccEEeEecCCHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK-FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 424 (507)
+ +++||++++.+++++.+++++++++|+++++||+... .|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~--~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 329 G-TTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ--LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp T-CCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT--TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred c-CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 9 9999999999999999999999999999999998643 488 99999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 425 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999877667899999999999999999999999999999876
Q ss_pred c
Q psy3132 505 N 505 (507)
Q Consensus 505 ~ 505 (507)
.
T Consensus 486 ~ 486 (487)
T 2w8n_A 486 G 486 (487)
T ss_dssp C
T ss_pred c
Confidence 4
No 27
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.1e-104 Score=835.77 Aligned_cols=452 Identities=28% Similarity=0.463 Sum_probs=434.6
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 6 ~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ 85 (484)
T 3ros_A 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESKE 85 (484)
T ss_dssp CEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH
T ss_pred cceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChH
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~ 204 (507)
|+..+++.++++++.++++.+...+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 86 ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 164 (484)
T 3ros_A 86 EVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPG 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChH
Confidence 999999999999999988776544322 4568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 205 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++.+|++++.++|+|+|++|+|+|+ +.++++ |+.||+||.|+||||+.+|+.|++.+++++||+++|||||||+||
T Consensus 165 t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV 240 (484)
T 3ros_A 165 SAALTAKIIKRAGAPEGSLINLYPS---YDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIV 240 (484)
T ss_dssp HHHHHHHHHHHHTCCTTSEEEECCC---HHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEE
T ss_pred HHHHHHHHHHHhCcCcCeEEEEeCC---hHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCccee
Confidence 9999999999999999999999984 567788 999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~ 364 (507)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+
T Consensus 241 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~-~~~gpli~~~~~~rv~~ 318 (484)
T 3ros_A 241 LDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSN-LKAGDPLEAD-TTLPPMNSEKAKEKLEA 318 (484)
T ss_dssp CTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTSTT-CCBCCCSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCCC-CccCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999 99999999999999999
Q ss_pred HHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecC
Q psy3132 365 IVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444 (507)
Q Consensus 365 ~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 444 (507)
+|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 319 ~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 397 (484)
T 3ros_A 319 QVKEAIDAGAKVFYQYPEIDS-KGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397 (484)
T ss_dssp HHHHHHHTTCEEEEECCCCCC-SSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECS
T ss_pred HHHHHHHcCCeEEecCCcCCC-CCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECC
Confidence 999999999999999986432 6999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 445 DISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 398 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 398 DIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp CHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred CHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 999999999999999999999777778999999999999999999999999999999875
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=2e-104 Score=840.20 Aligned_cols=468 Identities=32% Similarity=0.529 Sum_probs=428.6
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
+...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 456689999999976433 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCC-CCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP-VKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++.|+..+++.++++++.+++..+ ..+.. .++...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999988776555 33322 24577899999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTA-LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
+++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|+
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGA---GSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCC---TTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCC---CHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999984 578899999999999999999999999999
Q ss_pred Hhhcc--cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 263 SHCSQ--GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 263 ~~~~~--~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
+.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G 324 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKN-IPTG 324 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHT-CCBS
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHh-ccCC
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|.+++ +++||++++.+++++++++++++++|+++++||.. +|+|+.|||+.+++++|++++||+||||++|++|
T Consensus 325 ~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~----~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 399 (508)
T 3r64_A 325 DPSAEG-TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKA 399 (508)
T ss_dssp CTTSSS-CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE----ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred CCccCC-CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC----CCcEEecEEEecCCCCChhhcccccCceEEEEEe
Confidence 999999 99999999999999999999999999999999975 4899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|
T Consensus 400 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k 479 (508)
T 3r64_A 400 DDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDR 479 (508)
T ss_dssp SSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999999998754 678999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 480 ~v~~~ 484 (508)
T 3r64_A 480 WIGIK 484 (508)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 29
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.1e-104 Score=834.82 Aligned_cols=464 Identities=32% Similarity=0.539 Sum_probs=439.9
Q ss_pred cceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHH
Q psy3132 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE 109 (507)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 109 (507)
.++||||+|+.+...++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++
T Consensus 5 ~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 84 (475)
T 1euh_A 5 YKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGA 84 (475)
T ss_dssp CCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred cceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 37899999997654689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCC----cee-EEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 110 IMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKS----KEL-LMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 110 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++++|+|||..+++.|+..+++.++++++.++++.+...+...++ ... ++.++|+|||++|+|||||+.+.++++
T Consensus 85 ~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 164 (475)
T 1euh_A 85 ILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKI 164 (475)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHH
Confidence 999999999999999999999999999998877655433322234 456 899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.++++.|+.||++|.|+||||+.+|+.|++.
T Consensus 165 ~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 165 APALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGR---GSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCC---cHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 999999999999999999999999999999999999999999974 56789999999999999999999999999998
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~ 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLA-LTIGNPED 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHT-SCBSCGGG
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHh-ccCCCccc
Confidence 87 8999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHH
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 424 (507)
+ +++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 319 -~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~----~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 319 -D-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR----EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp -T-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE----ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred -c-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 7 99999999999999999999999999999999975 38999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcC-CCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINE-GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 425 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+++|+++|||++||||+|.+.++++++++++|+|+||+ +....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 393 eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 472 (475)
T 1euh_A 393 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472 (475)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEE
Confidence 99999999999999999999999999999999999999998 66566889999999999999999999999999999987
Q ss_pred cc
Q psy3132 504 GN 505 (507)
Q Consensus 504 ~~ 505 (507)
++
T Consensus 473 ~~ 474 (475)
T 1euh_A 473 DI 474 (475)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 30
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.8e-104 Score=837.94 Aligned_cols=469 Identities=30% Similarity=0.502 Sum_probs=423.8
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRD 84 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999975433 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCC-CCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP-VKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++.|+..+++.++++++.++++.+...+.. .++...+++++|+|||++|+|||||+.+.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 164 (485)
T 4dng_A 85 DIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSI 164 (485)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999999999999999887766544422 345778999999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 185 APALAAGCTCVIKPAEDTPLTA-LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|+.|++
T Consensus 165 ~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~---~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 165 APAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTD---VKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCC---HHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCC---ChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999984 5679999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 242 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~~~ 320 (485)
T 4dng_A 242 IAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQ-LPYGDQT 320 (485)
T ss_dssp HHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHH-CCBSCTT
T ss_pred HHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHh-ccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 321 ~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~----~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 395 (485)
T 4dng_A 321 DPK-TVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR----VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSD 395 (485)
T ss_dssp STT-CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSH
T ss_pred cCC-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC----CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCH
Confidence 999 99999999999999999999999999999999975 4899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 396 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 396 QEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999998754 678999999999999999999999999999998
Q ss_pred ecc
Q psy3132 503 FGN 505 (507)
Q Consensus 503 ~~~ 505 (507)
++.
T Consensus 476 ~~~ 478 (485)
T 4dng_A 476 IQK 478 (485)
T ss_dssp EEC
T ss_pred Eec
Confidence 763
No 31
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.3e-104 Score=840.09 Aligned_cols=470 Identities=29% Similarity=0.466 Sum_probs=440.6
Q ss_pred CCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 28 TYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
...+.||||+|+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 22 ~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (500)
T 2j6l_A 22 EENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVL 101 (500)
T ss_dssp SEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999964334999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
++++++|+|||..+++.|+..+++.++++++.++++.+...+...++...+++++|+|||++|+|||||+.+.++++++|
T Consensus 102 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 181 (500)
T 2j6l_A 102 GSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIA 181 (500)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHH
Confidence 99999999999999999999999999999998877666543332334556788999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAH----EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
|++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||++|.|+||||+.+|+.|++
T Consensus 182 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g----~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~ 257 (500)
T 2j6l_A 182 MICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG----GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257 (500)
T ss_dssp HHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC----SHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC----CHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999888766 56999999999996 5678999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 258 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~ 336 (500)
T 2j6l_A 258 MVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQ-IRVGNPW 336 (500)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHT-CCBSCTT
T ss_pred HhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhh-cccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++|||+++.+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 337 ~~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 337 DPN-VLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDR-PGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp STT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cCC-CccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCC-CCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 999 99999999999999999999999999999999986432 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHH--hhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVG--KKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKY 500 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~ 500 (507)
||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 999999999999999999999999999999 779999999998655 34689999999999999999999999999999
Q ss_pred EEec
Q psy3132 501 MCFG 504 (507)
Q Consensus 501 v~~~ 504 (507)
|+++
T Consensus 495 v~~~ 498 (500)
T 2j6l_A 495 CTIN 498 (500)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9875
No 32
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=4.4e-104 Score=839.06 Aligned_cols=491 Identities=27% Similarity=0.434 Sum_probs=450.3
Q ss_pred ccCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHHHhH
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKEAFE 79 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~ 79 (507)
..+.++...+.++.+.+.+..+ ...++||||+|+.++..++++||+ ||+++++++.++.+|+++|+++|++||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~ 88 (516)
T 1uzb_A 9 EPIETFQTEEARRAMREALRRVREEFGRHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88 (516)
T ss_dssp CCCCCCCSHHHHHHHHHHHHHHHHTTTEEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhHHHHHHHhhhhhccccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 3455665555554444444221 134689999999764449999999 6999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc-CCCCCceeE
Q psy3132 80 QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP-SPVKSKELL 158 (507)
Q Consensus 80 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 158 (507)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.++++.+...+ ...++...+
T Consensus 89 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (516)
T 1uzb_A 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNE 168 (516)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEE
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999999988887765422 222355678
Q ss_pred EEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHH
Q psy3132 159 MVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGK 238 (507)
Q Consensus 159 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~ 238 (507)
+.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++
T Consensus 169 ~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~---~~~~~~ 245 (516)
T 1uzb_A 169 SFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV---GEEVGA 245 (516)
T ss_dssp EEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCS---SSHHHH
T ss_pred EEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCC---Cchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999984 578899
Q ss_pred hhhcCCCccEEEEeCCHHHHHHHHHhhc------ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccC
Q psy3132 239 LLCTSPHVAGISFTGSTQVGKILYSHCS------QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312 (507)
Q Consensus 239 ~L~~~~~v~~v~ftGs~~~g~~i~~~~~------~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~ 312 (507)
.|++||+||.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 246 ~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 325 (516)
T 1uzb_A 246 YLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA 325 (516)
T ss_dssp HHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE
T ss_pred hhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccC
Confidence 9999999999999999999999999998 7899999999999999999999999999999999999999999999
Q ss_pred cceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceee
Q psy3132 313 NRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA 392 (507)
Q Consensus 313 ~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~ 392 (507)
+|||||+++||+|+++|++++++ +++|+| +++ +++|||+++.+++++.+++++++++| ++++||.... ..|+|++
T Consensus 326 ~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p-~~~-~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~-~~g~~~~ 400 (516)
T 1uzb_A 326 SRLILTQGAYEPVLERVLKRAER-LSVGPA-EEN-PDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLE-GEGYFIA 400 (516)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTT-CCBSCG-GGC-CSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCS-SSSCCBC
T ss_pred cEEEEchHHHHHHHHHHHHHHHh-ccCCCC-ccc-cccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCC-CCCcEEC
Confidence 99999999999999999999999 999999 888 99999999999999999999999999 8999997632 2589999
Q ss_pred ceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--C
Q psy3132 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--H 470 (507)
Q Consensus 393 Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~ 470 (507)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .
T Consensus 401 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~ 480 (516)
T 1uzb_A 401 PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALV 480 (516)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCT
T ss_pred CEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986542 5
Q ss_pred CCCcccCCCCCCCCC-CchHHHHHhchhceEEEec
Q psy3132 471 TEAAFGGVKESGLGR-EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 471 ~~~pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~ 504 (507)
+.+||||+|.||+|+ ++|++++++||+.|+|+++
T Consensus 481 ~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 481 GVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp TTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 679999999999994 7999999999999999764
No 33
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4e-104 Score=834.20 Aligned_cols=472 Identities=31% Similarity=0.487 Sum_probs=442.2
Q ss_pred cCCcceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
|...++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 3 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp CCBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34457899999997643 2 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.+++++...++..+...+....+...+++++|+|||++|+|||||+.+.++++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 83 EELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 99999999999999999999999999999999887777665543222234567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g----~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~ 238 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG----AHDVVNGILEHPEIKAISFVGSKPVGEYVYKK 238 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC----SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC----CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 35789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcc-eechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR-FLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|++++++ +++|+|.
T Consensus 239 aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~-~~vG~~~ 316 (486)
T 1t90_A 239 GSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVAD-IKIGNGL 316 (486)
T ss_dssp HHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTT-CCBSCTT
T ss_pred HhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHh-cccCCCC
Confidence 99999999999999999999999999999999999999999999999999 999999 99999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||.......|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~ 395 (486)
T 1t90_A 317 DDG-VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNL 395 (486)
T ss_dssp STT-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred ccC-CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCH
Confidence 999 9999999999999999999999999999999997432125899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC--CCchHHHHHhchhceE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG--REGSRHGMEEFTQIKY 500 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g--~~~g~~~l~~~t~~k~ 500 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+
T Consensus 396 ~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~ 475 (486)
T 1t90_A 396 KEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKV 475 (486)
T ss_dssp HHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999986443 467999999999999 8999999999999999
Q ss_pred EEecc
Q psy3132 501 MCFGN 505 (507)
Q Consensus 501 v~~~~ 505 (507)
|++++
T Consensus 476 v~~~~ 480 (486)
T 1t90_A 476 VTARY 480 (486)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98753
No 34
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.3e-104 Score=837.52 Aligned_cols=464 Identities=28% Similarity=0.451 Sum_probs=440.5
Q ss_pred CcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH-HhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 29 YTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
..++||||+|+.+...++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++++|
T Consensus 18 ~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 97 (501)
T 1uxt_A 18 VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 97 (501)
T ss_dssp EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 446899999997763499999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCC--CC--CceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP--VK--SKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++++++|+|||..+++.|+..+++.++++++.++++.+...+.. .. +...+++++|+|||++|+|||||+.+.+++
T Consensus 98 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (501)
T 1uxt_A 98 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177 (501)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999998887766543322 12 336789999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ + ++++.|+.||+||.|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 178 ITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLP---G-KEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCC---H-HHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCC---c-HHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999974 5 88999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 254 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~ 330 (501)
T 1uxt_A 254 VGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSS-LRVGDPR 330 (501)
T ss_dssp HHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHT-CCBSCTT
T ss_pred hcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHh-ccCCCcc
Confidence 888 9999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCC-ceeeceEeecCC---CCCCCcccceeeccEEeEe
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS-KFFAPTILTNIT---PDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~ 419 (507)
+++ +++||++++.+++++.+++++++++|+++++||+. .| +|++|||+.+++ ++|++++||+||||++|++
T Consensus 331 ~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~----~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~ 405 (501)
T 1uxt_A 331 DPT-VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR----LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVE 405 (501)
T ss_dssp STT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB----CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred ccC-CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEe
Confidence 999 99999999999999999999999999999999975 37 999999999999 9999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCC-CCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEG-IISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~-~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++ ....+.+||||+|.||+|+++|++++++||+.
T Consensus 406 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~ 485 (501)
T 1uxt_A 406 VKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAY 485 (501)
T ss_dssp ESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCce
Confidence 99999999999999999999999999999999999999999999987 55567899999999999999999999999999
Q ss_pred eEEEec
Q psy3132 499 KYMCFG 504 (507)
Q Consensus 499 k~v~~~ 504 (507)
|+|+++
T Consensus 486 k~v~~~ 491 (501)
T 1uxt_A 486 KTIVFN 491 (501)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999875
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-103 Score=829.90 Aligned_cols=464 Identities=34% Similarity=0.577 Sum_probs=417.8
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+... ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4578999999986443 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHH
Q psy3132 107 LAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 185 (507)
|++++++|+|||..++ +.|+..+++.++++++.+++..+... ....+++++|+|||++|+|||||+.+.+++++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLA 161 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 78999999999999998887655331 24578899999999999999999999999999
Q ss_pred hHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 186 ~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
+||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 162 AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGD---GAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCC---TTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECC---ChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 678899999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.++
T Consensus 239 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~~ 317 (478)
T 3ty7_A 239 AKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQ-VRVGNPRED 317 (478)
T ss_dssp TTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHT-CCBSCTTST
T ss_pred HhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+ +++||++++.+++++.+++++++++|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 318 G-TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp T-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred C-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 9 99999999999999999999999999999999943211 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++||+.|+|+.
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999999 5556789999999999999999999999999999863
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=3.5e-102 Score=816.33 Aligned_cols=456 Identities=31% Similarity=0.553 Sum_probs=436.1
Q ss_pred CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh
Q psy3132 43 KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES 122 (507)
Q Consensus 43 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 122 (507)
..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus 7 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T 3etf_A 7 TQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA 86 (462)
T ss_dssp CCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred CccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCC
Q psy3132 123 LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202 (507)
Q Consensus 123 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~ 202 (507)
+.|+..+++.++++++.++++.+.. +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~t 165 (462)
T 3etf_A 87 RAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNV 165 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence 9999999999999999988776654 323345678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcE
Q psy3132 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282 (507)
Q Consensus 203 ~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 282 (507)
|+++.++.+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|++.+++++||+++|+|||||+
T Consensus 166 p~~~~~l~~~l~~aglP~gv~~vv~g----~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~ 241 (462)
T 3etf_A 166 TGCAQMIARILAEAGTPAGVYGWVNA----NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF 241 (462)
T ss_dssp HHHHHHHHHHHHHTTCCBTTEEECCC----CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEE
T ss_pred cHHHHHHHHHHHHhCCCcCeEEEEEC----CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCcc
Confidence 99999999999999999999999997 45778899999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHH
Q psy3132 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362 (507)
Q Consensus 283 iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~ 362 (507)
||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++
T Consensus 242 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~-~~~gpli~~~~~~~v 319 (462)
T 3etf_A 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAA-LKMGDPLVEE-NDLGPMARFDLRDEL 319 (462)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH-CCBSCTTSTT-CSBCCCSCHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHh-hcCCCCcccc-CcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 9999999999 999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 363 ~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
.+++++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~ 398 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAG-EGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIF 398 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSS-SSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEE
T ss_pred HHHHHHHHHCCCEEEeCCcccCC-CCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999999986543 69999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEeccC
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 506 (507)
|+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++.+
T Consensus 399 t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r~ 462 (462)
T 3etf_A 399 TADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462 (462)
T ss_dssp CSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECCC
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEecC
Confidence 9999999999999999999999987777889999999999999999999999999999988653
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.4e-101 Score=822.94 Aligned_cols=482 Identities=23% Similarity=0.307 Sum_probs=444.8
Q ss_pred hhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHH
Q psy3132 16 MHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90 (507)
Q Consensus 16 ~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~ 90 (507)
.+..+.+++.++. ..++||||+|+.+.+.+.++||.| |+++++++.++.+|+++|+++|++||+.|+.++.++|+
T Consensus 46 ~r~~~~~a~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~ 125 (563)
T 4e3x_A 46 ERDALQKALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRA 125 (563)
T ss_dssp HHHHHHHHHHTTTTCCEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 3455555555543 567999999998766678899998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-HHHHHHHHHHHcCCChhhhhHh-HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEE
Q psy3132 91 IVLKRWLKELEGN-KQALAEIMTQESGKPPTESLGE-VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVG 168 (507)
Q Consensus 91 ~~L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 168 (507)
++|++++++|+++ +++|+.++++|+|||..+++.| +..+++.++++++.++++.+........+...+.++.|+|||+
T Consensus 126 ~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~ 205 (563)
T 4e3x_A 126 QVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVA 205 (563)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEE
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEE
Confidence 9999999999999 9999999999999999999877 9999999999999998877643222222345667788889999
Q ss_pred EEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccE
Q psy3132 169 LITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAG 248 (507)
Q Consensus 169 ~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~ 248 (507)
+|+|||||+....++++||| +||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|+ +.++++.|+.||+|++
T Consensus 206 ~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~---g~~~g~~L~~hp~v~~ 281 (563)
T 4e3x_A 206 AISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD---GPTFGDTVTSSEHLCG 281 (563)
T ss_dssp EECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCC---HHHHHHHHTTCTTEEE
T ss_pred EECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCC---cHHHHHHHHhCCCcCE
Confidence 99999999999999999999 5999999999999999999999999999999999999985 6789999999999999
Q ss_pred EEEeCCHHHHHHHHHhhcccccc------cccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhH
Q psy3132 249 ISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322 (507)
Q Consensus 249 v~ftGs~~~g~~i~~~~~~~~~~------~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~ 322 (507)
|+||||+.+|+.|++.+++++|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++|
T Consensus 282 I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~ 361 (563)
T 4e3x_A 282 INFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLW 361 (563)
T ss_dssp EEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGH
T ss_pred EEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchH
Confidence 99999999999999999998885 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccCCC-CCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccCCCceeeceEeecCC
Q psy3132 323 DQFVEMLKVEITKSFIQGDT-SKNDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKLGSKFFAPTILTNIT 400 (507)
Q Consensus 323 ~~f~~~l~~~~~~~~~~g~~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~ 400 (507)
|+|+++|++++++ +++|+| .+++ +++||++++.+++++.++|+++++ +|+++++||..+.. .|+|++|||+.+++
T Consensus 362 d~f~~~l~~~~~~-l~vGdp~~d~~-~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~-~G~fv~PTvl~~v~ 438 (563)
T 4e3x_A 362 PQIKGRLLEEHSR-IKVGDPAEDFG-TFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNES-VGYYVEPCIIESKD 438 (563)
T ss_dssp HHHHHHHHHHHHT-CCBSCTTTCTT-CSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECS-SSCEECCEEEEESC
T ss_pred HHHHHHHHHHHHh-ccCCCcccCcC-CccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCC-CCcEecCEEEecCC
Confidence 9999999999999 999999 9999 999999999999999999999996 79999999987543 69999999999999
Q ss_pred CCCCCcccceeeccEEeEecCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCCCC--CCCC
Q psy3132 401 PDMLCYTEEVFGPVAVCIKFKT--EEESLCVA-NNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIIS--HTEA 473 (507)
Q Consensus 401 ~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~G~v~iN~~~~~--~~~~ 473 (507)
++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+.. .+.+
T Consensus 439 ~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~ 518 (563)
T 4e3x_A 439 PQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQ 518 (563)
T ss_dssp TTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTS
T ss_pred CCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCC
Confidence 9999999999999999999997 69999999 799999999999999999999999975 999999987643 4679
Q ss_pred cccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 474 AFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 474 pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.||+| +++|+++|++|++.|+|...
T Consensus 519 PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~ 550 (563)
T 4e3x_A 519 PFGGARASGTNDKPGGPHYILRWTSPQVIKET 550 (563)
T ss_dssp CCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE
T ss_pred CCCCccccCCCCccCCHHHHHHhCceEEEEEe
Confidence 99999999998 88999999999999999765
No 38
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.9e-100 Score=801.89 Aligned_cols=460 Identities=27% Similarity=0.422 Sum_probs=433.2
Q ss_pred cceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 30 TQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 30 ~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.++||||+|+.+... +.++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 6 ~~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999986544 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.++++++..+...+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP-LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE-ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999888776654321 1234567779999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++++
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g----~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 240 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG----GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC----SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTC
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC----CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999997 468899999999999999999999999999999999
Q ss_pred cccc-ccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhh-HHHHHHHHHHHHHhccccCC-CCCC
Q psy3132 269 IKRL-SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV-FDQFVEMLKVEITKSFIQGD-TSKN 345 (507)
Q Consensus 269 ~~~~-~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~~g~-~~~~ 345 (507)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|++++++ +++|+ |.++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~-~~~G~~~~~~ 319 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSAT-LRVGRFDEQP 319 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHH-CCBCCTTCSS
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHh-ccCCCCCCCC
Confidence 9998 7999999999999999999999999999999999999999999999996 99999999999999 99999 9999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+ +++||++++.+++++.+++++++++|+++++||...+. +|+|++|||+. +++++++++||+||||++|++|+|+||
T Consensus 320 ~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~e 396 (490)
T 3ju8_A 320 A-PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPID-GAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAA 396 (490)
T ss_dssp C-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCST-TSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHH
T ss_pred c-CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCC-CCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHH
Confidence 9 99999999999999999999999999999999976543 69999999999 999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||++ ++++||+.|+|++.
T Consensus 397 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 397 AIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred HHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 9999999999999999999999999999999999999999765 3578999999999975 48999999998764
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.8e-100 Score=802.22 Aligned_cols=453 Identities=26% Similarity=0.396 Sum_probs=426.6
Q ss_pred CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh
Q psy3132 43 KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES 122 (507)
Q Consensus 43 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 122 (507)
+.++++||+||+++++++.++.+|+++|+++|++||+.|+++++++|.++|+++++.|++++++|++++++|+||+. ++
T Consensus 6 ~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~ 84 (474)
T 4h7n_A 6 KTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS-IT 84 (474)
T ss_dssp CCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-HH
T ss_pred CEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-HH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999985 55
Q ss_pred hHhHHHHHHHHHHHHHHHHHhcCc-cccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCC
Q psy3132 123 LGEVVYANSFVDWFSEEARRTYGE-LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201 (507)
Q Consensus 123 ~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~ 201 (507)
..|+..+++.+++++..+.+.... ......++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 85 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~ 164 (474)
T 4h7n_A 85 VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEI 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccccc
Confidence 679999999999998887765443 2333344566778899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCc
Q psy3132 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP 281 (507)
Q Consensus 202 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~ 281 (507)
+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.| ++.|+||||+.+|+.|++.+++++||+++|||||||
T Consensus 165 tp~~~~~l~~~~~~ag~p~gv~~~v~g----~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p 238 (474)
T 4h7n_A 165 APRFVAPLLMALNTVPELRDVLIFVEG----GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDP 238 (474)
T ss_dssp SCTTHHHHHHHHTTCTTTTTTEEECCC----CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEE
T ss_pred CchHHHHHHhhhhhhcccccceeeccc----cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCc
Confidence 999999999999999999999999997 56788889876 899999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHH
Q psy3132 282 FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 282 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.+ +++|+|.+++ +++||++++.++++
T Consensus 239 ~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHR-LQLAYPLVED-GAIGPIIAEKQAGI 316 (474)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHH-CCBCCSSGGG-CSBCCCSSHHHHHH
T ss_pred cccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhc-cccCCCcccc-cccCccccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999 99999999999999
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
+.+++++++++|+++++||...+..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998765446899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCCcccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIIS--HTEAAFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+|.++++++++++++|+|+||+.... .+..||||+|.||+| +++|++|+++||+.|+|+++
T Consensus 397 ~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~ 462 (474)
T 4h7n_A 397 FAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIK 462 (474)
T ss_dssp ECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEEC
Confidence 9999999999999999999999987653 468999999999998 78999999999999999886
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.1e-99 Score=849.73 Aligned_cols=491 Identities=24% Similarity=0.392 Sum_probs=459.7
Q ss_pred cCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 7 LGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
.|.|++.......+.+++.++ ...++||||+|+.++..++++||+| ++++++++.++.+|++.|+++|++||+.
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~ 583 (1026)
T 4f9i_A 504 AMVDFTRADHRAAFPKHIAQVRTQLGKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA 583 (1026)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHTTCCEEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhhccccccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 477888887777777776653 2457899999998765599999998 9999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV 160 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (507)
|+.+++++|+++|++++++|++++++|++++++|+|||..+++.|+..++++++||+..++++.+...+...++...+..
T Consensus 584 W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~ 663 (1026)
T 4f9i_A 584 WRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYF 663 (1026)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeE
Confidence 99999999999999999999999999999999999999999999999999999999999988766543332356678899
Q ss_pred eecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhh
Q psy3132 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLL 240 (507)
Q Consensus 161 ~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L 240 (507)
++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.++++.|
T Consensus 664 ~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~---g~~vg~~L 740 (1026)
T 4f9i_A 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGR---GSVMGDYL 740 (1026)
T ss_dssp EEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCC---HHHHHHHH
T ss_pred eecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecC---cHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 67899999
Q ss_pred hcCCCccEEEEeCCHHHHHHHHHhhc------ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcc
Q psy3132 241 CTSPHVAGISFTGSTQVGKILYSHCS------QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR 314 (507)
Q Consensus 241 ~~~~~v~~v~ftGs~~~g~~i~~~~~------~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~ 314 (507)
+.||+|++|+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|+|++|
T Consensus 741 ~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~r 820 (1026)
T 4f9i_A 741 VDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSR 820 (1026)
T ss_dssp HHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEE
T ss_pred HhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCce
Confidence 99999999999999999999999988 478999999999999999999999999999999999999999999999
Q ss_pred eechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeece
Q psy3132 315 FLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPT 394 (507)
Q Consensus 315 v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Pt 394 (507)
||||+++||+|+++|++++++ +++|+|.+++ +++||+|++.+++++.++|++++++| ++++||..++. .|+|+.||
T Consensus 821 l~V~~~i~d~f~~~L~~~~~~-l~vG~p~d~~-t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~-~G~fv~PT 896 (1026)
T 4f9i_A 821 VIVLDAVYDKFIERLVSMAKA-TKVGPSEDPA-NYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAG-EGYFVPMT 896 (1026)
T ss_dssp EEEEGGGHHHHHHHHHHHHHH-CCBCCTTSTT-CSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSS-SSCCCCCE
T ss_pred EEecHHHHHHHHHHHHHHHHh-cccCCccccc-CccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCC-CCceecce
Confidence 999999999999999999999 9999999999 99999999999999999999999999 99999976542 49999999
Q ss_pred EeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCC
Q psy3132 395 ILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTE 472 (507)
Q Consensus 395 vl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~ 472 (507)
|+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.
T Consensus 897 vl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~ 976 (1026)
T 4f9i_A 897 IIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVER 976 (1026)
T ss_dssp EEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTT
T ss_pred eeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997653 467
Q ss_pred CcccCCCCCCCCC-CchHHHHHhchhceEEEec
Q psy3132 473 AAFGGVKESGLGR-EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 473 ~pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~ 504 (507)
+||||+|.||+|+ .+|+++|++||+.|+|+++
T Consensus 977 ~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~ 1009 (1026)
T 4f9i_A 977 QPFGGARMSGVGTKAGGPDYLLHFMDPRVVTEN 1009 (1026)
T ss_dssp SCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEE
T ss_pred CCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEe
Confidence 9999999999995 6999999999999999875
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.1e-98 Score=799.31 Aligned_cols=464 Identities=22% Similarity=0.296 Sum_probs=422.5
Q ss_pred cceeECCEeeeCCC-CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHH-hHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 30 TQAYINGEWVHSSK-KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEA-FEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 30 ~~~~I~G~~~~~~~-~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
.++||||+|+.+.. .++++||+||+++++++.++ +|+++|+++|++| |+.|+.++.++|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (534)
T 2y53_A 8 LKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDY 86 (534)
T ss_dssp CCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57899999996543 49999999999999999988 9999999999999 599999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCc-------cccCCCCC-ceeEEEeecc-cEEEEEcCCcccHH
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE-------LVPSPVKS-KELLMVREPL-GVVGLITPWNFPMA 178 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~n~P~~ 178 (507)
++++++|+|||..+++.|+..+++.+++|+..++++.+. ..+...++ ...+..++|+ |||++|+|||||+.
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~ 166 (534)
T 2y53_A 87 YAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSW 166 (534)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHH
Confidence 999999999999999999999999999999988766431 11211122 2457889997 99999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ-IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~ 257 (507)
+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+ +.++++.| +++|.|+||||+.+
T Consensus 167 ~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~---~~~l~~~l---~~vd~V~FTGS~~~ 240 (534)
T 2y53_A 167 GLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGS---SAGLLDQI---RSFDVVSFTGSADT 240 (534)
T ss_dssp HHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSC---CTTSGGGC---CTTCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCC---hHHHHhcc---cccCEEEEECCHHH
Confidence 999999999999999999999999999999999999999 799999999984 33333332 57999999999999
Q ss_pred HHHHHHhhc--ccccccccccCCCCcEEEcCCC-----CHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHH
Q psy3132 258 GKILYSHCS--QGIKRLSLELGGNAPFIVYSNA-----NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330 (507)
Q Consensus 258 g~~i~~~~~--~~~~~~~lelgG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 330 (507)
|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 241 G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 320 (534)
T 2y53_A 241 AATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALK 320 (534)
T ss_dssp HHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHH
Confidence 999998875 8899999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc-----cCCCceeeceEeecCCCC--C
Q psy3132 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT-----KLGSKFFAPTILTNITPD--M 403 (507)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~~g~~~~Ptvl~~~~~~--~ 403 (507)
+++++ +++|+|.+++ +++|||+++.+++++.++|+++ .+|+++++||.... ...|+|++|||+.+++++ +
T Consensus 321 ~~~~~-~~vG~p~~~~-~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 321 AKLAK-ITVGNPRNDA-VRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHTT-CCBBCTTSTT-CSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHh-ccCCCCCcCC-CCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 99999 9999999999 9999999999999999999999 68999999997431 125899999999999987 6
Q ss_pred CCcccceeeccEEeEecC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEEcCCCC-----
Q psy3132 404 LCYTEEVFGPVAVCIKFK---TE-----EESLCVANNSNTGLAGYFFTNDISQAWRVGKKL--QVGMVGINEGII----- 468 (507)
Q Consensus 404 ~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~G~v~iN~~~~----- 468 (507)
++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+.++++++++ ++|+|+||++..
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ----CCCCCcccCCCCCCCCCC-chHHHHHhchhceEEEe
Q psy3132 469 ----SHTEAAFGGVKESGLGRE-GSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 469 ----~~~~~pfGG~~~SG~g~~-~g~~~l~~~t~~k~v~~ 503 (507)
..+.+||||+|.||+|++ +|++++++|++.|+|..
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 246899999999999999 79999999999999865
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.2e-96 Score=772.13 Aligned_cols=442 Identities=24% Similarity=0.364 Sum_probs=400.1
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL- 123 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 123 (507)
+++.||.||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 8 ~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ 87 (457)
T 3lns_A 8 HHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDL 87 (457)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH
T ss_pred ccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhHHHHHHHHHHHHHHHHHhcCc-cccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 124 GEVVYANSFVDWFSEEARRTYGE-LVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 124 ~ev~~~~~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
.|+..+++.++++++.++++... ..+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 88 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 167 (457)
T 3lns_A 88 AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSE 167 (457)
T ss_dssp HTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 59999999999999888776542 1111 11346788999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|+++.++++++.++ +|+|++|+|+| +.++++.|++ ++||.|+||||+.+|+.|++.+++++||+++||||||
T Consensus 168 ~tp~t~~~l~~l~~~a-lP~gvv~vv~g----~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~ 241 (457)
T 3lns_A 168 TTPETSAVIEKIIAEA-FAPEYVAVIQG----GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKC 241 (457)
T ss_dssp TCHHHHHHHHHHHHHH-CCTTTEEECCC----CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCE
T ss_pred CChHHHHHHHHHHHHh-CCHhhEEEecC----CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCC
Confidence 9999999999999999 99999999997 4678899998 7899999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ ++ |.++ ++||++++.+++
T Consensus 242 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~---p~~~---~~gpli~~~~~~ 314 (457)
T 3lns_A 242 PLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKT-EL---PEIN---STGKLVTERQVQ 314 (457)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHH-HC---CSTT---TTCCCSSHHHHH
T ss_pred CCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHh-cC---CCcc---cccCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 77 5543 799999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc-CCCCcEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN-SNTGLAG 439 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a 439 (507)
++.++++++ ++++++||..+. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 315 rv~~~i~~a---~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQADV--SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCEEG--GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHhc---CCeEEeCCccCC--CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 999999975 369999998653 5999999999999999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999999999754 467899999999999999999999999999999763
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.4e-95 Score=764.53 Aligned_cols=428 Identities=27% Similarity=0.424 Sum_probs=395.1
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHH
Q psy3132 61 DMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEE 139 (507)
Q Consensus 61 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 139 (507)
..+.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++..++++++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 446779999999999999999999999999999999999999999999999999999999997 5999999988888776
Q ss_pred HHHhcCccc---cCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHc
Q psy3132 140 ARRTYGELV---PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA 216 (507)
Q Consensus 140 ~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a 216 (507)
......... .....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 654432111 01112456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHH
Q psy3132 217 QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296 (507)
Q Consensus 217 GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~ 296 (507)
+|+|++|+|+| +.+.+..|+.| ++|.|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.
T Consensus 174 -lP~gvv~vv~g----~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 174 -LDKDLYPVING----GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp -SCTTTSCBCCC----SHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred -CCcceEEEEEC----CHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 99999999997 34556677787 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeE
Q psy3132 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376 (507)
Q Consensus 297 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 376 (507)
+++++|.|+||.|++++|||||+++||+|+++|++++++ + +|+|.+++ +++||++++.+++++.+++ +|+++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~-~g~~~~~~-~~~gpli~~~~~~rv~~~i-----~ga~v 319 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKE-F-YGEDAKKS-RDYGRIISARHFQRVMGLI-----EGQKV 319 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHH-H-HCSCGGGC-TTCCCCSCHHHHHHHHHHH-----TTSEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHH-h-cCCCCccc-CcccccCCHHHHHHHHHHH-----cCCEE
Confidence 999999999999999999999999999999999999998 7 69999988 9999999999999999998 69999
Q ss_pred EeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q psy3132 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL 456 (507)
Q Consensus 377 ~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 456 (507)
++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 320 ~~GG~~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l 397 (469)
T 3sza_A 320 AYGGTGDA--ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAET 397 (469)
T ss_dssp EECCCEET--TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHC
T ss_pred EeCCccCC--CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhC
Confidence 99998753 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 457 QVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 457 ~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 398 ~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~ 447 (469)
T 3sza_A 398 SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 447 (469)
T ss_dssp CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEEC
T ss_pred CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEEC
Confidence 999999999764 357899999999999999999999999999999886
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.5e-95 Score=773.55 Aligned_cols=472 Identities=23% Similarity=0.326 Sum_probs=416.8
Q ss_pred ccCcccchHHhhHHHHHhhhcc-CCcceeECCEeeeCCCCccccCCCCCCeeE-EecCCCHHHHHHHHHHHHHHhHHhhc
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLS-TYTQAYINGEWVHSSKKFPVYNPANDEHLA-DVPDMGVEDVQYAIMSAKEAFEQWSQ 83 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~w~~ 83 (507)
.+|+|+..+ -.|.+.+..+ ...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||+.|+.
T Consensus 8 ~~~~~~~~~---~~~~~~~~~~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~ 81 (528)
T 3v4c_A 8 SSGVDLGTE---NLYFQSMMIFTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGY 81 (528)
T ss_dssp ------------------CCSCCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccCcc---cHHHHHhhhcccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 367787776 3455555543 4568999999998764 99999999998 99999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHH--hcCccc----cCC--CCCc
Q psy3132 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR--TYGELV----PSP--VKSK 155 (507)
Q Consensus 84 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~--~~~~ 155 (507)
++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.+++ ..+... +.. ..+.
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (528)
T 3v4c_A 82 SSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQ 161 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBC
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998876 222221 110 1234
Q ss_pred eeEEEeecccEEEEEcCCcccHHhHH--hhHHhHhhcCCeEEeccCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCC
Q psy3132 156 ELLMVREPLGVVGLITPWNFPMAMIT--RKVAPALAAGCTCVIKPAEDTPLTALALAALA----HEAQIPKGVLNVVTSS 229 (507)
Q Consensus 156 ~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l----~~aGlP~gvv~~v~g~ 229 (507)
..+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|+
T Consensus 162 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 241 (528)
T 3v4c_A 162 EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGG 241 (528)
T ss_dssp CEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCC
T ss_pred cceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCC
Confidence 57889999999999999999999865 89999999999999999999999999998865 5689999999999985
Q ss_pred CCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc--cccccccCCCCcEEEcCCC---CHHHHHHHHHHHHHHh
Q psy3132 230 RTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI--KRLSLELGGNAPFIVYSNA---NLQKAVSGAMAAKFRN 304 (507)
Q Consensus 230 ~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~--~~~~lelgG~~~~iV~~da---Dl~~aa~~i~~~~~~~ 304 (507)
+.++++.|++||+||+|+||||+.+|+.|++.+++++ ||+++|||||||+||++|| |++.|++.+++++|.|
T Consensus 242 ---~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n 318 (528)
T 3v4c_A 242 ---SRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMG 318 (528)
T ss_dssp ---CHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGG
T ss_pred ---CHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999999999999999 9999999999999999999 8899999999999999
Q ss_pred cCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc
Q psy3132 305 CGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 383 (507)
+||.|++++|||||++ +||+|+++|++++++ ++. + +.+||++++.+.+++.++++ ++|+++++||..
T Consensus 319 ~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~-~~~------~-~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~- 386 (528)
T 3v4c_A 319 AGQFCTNPGIAVVIEGADADRFTTAAVEALAK-VAP------Q-TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES- 386 (528)
T ss_dssp GGCCTTCCCEEEEESSHHHHHHHHHHHHHHHT-CCC------E-ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-
T ss_pred CCCccccCcEEEEecccHHHHHHHHHHHHHHh-ccc------C-CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-
Confidence 9999999999999997 999999999999998 754 3 67999999888888887764 479999999975
Q ss_pred ccCCCceeeceEeecCCCC---CCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHhhcc-
Q psy3132 384 TKLGSKFFAPTILTNITPD---MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN--DISQAWRVGKKLQ- 457 (507)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~- 457 (507)
.|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++
T Consensus 387 ---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~ 463 (528)
T 3v4c_A 387 ---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLER 463 (528)
T ss_dssp ---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred ---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhh
Confidence 5999999999988887 899999999999999999999999999999999999999999 8999999999998
Q ss_pred -eeeEEEcCCCC---CCCCCcccC-CCCCCCCCCc--hHHHHHhchhceEE
Q psy3132 458 -VGMVGINEGII---SHTEAAFGG-VKESGLGREG--SRHGMEEFTQIKYM 501 (507)
Q Consensus 458 -~G~v~iN~~~~---~~~~~pfGG-~~~SG~g~~~--g~~~l~~~t~~k~v 501 (507)
+|+|+||+++. ..+.+|||| +|.||+|+++ |++|+++||++|++
T Consensus 464 ~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 464 KAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp HEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred cCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99999999654 357899999 9999999985 99999999998864
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=3.6e-91 Score=779.35 Aligned_cols=463 Identities=27% Similarity=0.427 Sum_probs=429.3
Q ss_pred cccCcccchHHhhHHHHHhhhccCCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcC
Q psy3132 5 SCLGYSVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84 (507)
Q Consensus 5 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~ 84 (507)
...|+|++.+.....+.+++...... | .| ++.++.+|++.|+++|++||+.|+.+
T Consensus 515 n~~~~d~~~~~~~~~~~~~~~~~~~~-------~----------~p--------v~~a~~~dv~~Av~aA~~A~~~W~~~ 569 (1001)
T 3haz_A 515 NSRGVEFGARTALDQLLTDVKAETGD-------L----------KP--------IADATPDQAHAAVAAARAGFAGWSRT 569 (1001)
T ss_dssp CCCCCCTTSHHHHHHHHHHHHHCCCC-------C----------CC--------CCCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhc-------C----------CC--------cccCCHHHHHHHHHHHHHHHHHhccC
Confidence 34799999999999998888764321 3 23 79999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc-CCCCCceeEEEeec
Q psy3132 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP-SPVKSKELLMVREP 163 (507)
Q Consensus 85 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P 163 (507)
++++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+.... ....+...++.++|
T Consensus 570 ~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P 649 (1001)
T 3haz_A 570 PAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRG 649 (1001)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999887654321 12346678899999
Q ss_pred ccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcC
Q psy3132 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTS 243 (507)
Q Consensus 164 ~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~ 243 (507)
+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.+ ++.|+.|
T Consensus 650 ~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~---g~~-g~~L~~~ 725 (1001)
T 3haz_A 650 RGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGD---GRI-GAALTAH 725 (1001)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCC---HHH-HHHHHHC
T ss_pred CcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecC---chH-HHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999985 555 9999999
Q ss_pred CCccEEEEeCCHHHHHHHHHhhccc---ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhh
Q psy3132 244 PHVAGISFTGSTQVGKILYSHCSQG---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320 (507)
Q Consensus 244 ~~v~~v~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~ 320 (507)
|+|+.|+||||+.+|+.|++.++++ +||+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||++
T Consensus 726 p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~ 805 (1001)
T 3haz_A 726 PDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQED 805 (1001)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHH
T ss_pred CCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHH
Confidence 9999999999999999999988854 8999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCC
Q psy3132 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400 (507)
Q Consensus 321 i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~ 400 (507)
++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.++|++++.+| ++ +||..++ +|+|+.|||+.+
T Consensus 806 i~d~f~~~L~~~~~~-l~vGdp~d~~-t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~--~G~fv~PTvl~~-- 877 (1001)
T 3haz_A 806 VADRMIEMVAGAARE-LKIGDPSDVA-THVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAP--EGCFVAPHIFEL-- 877 (1001)
T ss_dssp HHHHHHHHHHHHHHT-CCBSCTTSTT-CSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCC--SSSCCCCEEEEC--
T ss_pred HHHHHHHHHHHHHHh-cCCCCccccc-CccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCC--CCcEEeeEEecC--
Confidence 999999999999999 9999999999 99999999999999999999999888 88 8887653 599999999975
Q ss_pred CCCCCcccceeeccEEeEecCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCCccc
Q psy3132 401 PDMLCYTEEVFGPVAVCIKFKT--EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTEAAFG 476 (507)
Q Consensus 401 ~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfG 476 (507)
+++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+|||
T Consensus 878 ~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFG 957 (1001)
T 3haz_A 878 TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFG 957 (1001)
T ss_dssp SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBC
T ss_pred CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCC
Confidence 6789999999999999999996 79999999999999999999999999999999999999999997653 3578999
Q ss_pred CCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 477 GVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 477 G~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+|.||+| +.+|++++++||+.|+|+++
T Consensus 958 G~k~SG~G~~~gG~~gl~~ft~~K~v~~~ 986 (1001)
T 3haz_A 958 GNGLSGTGPKAGGPHYLARFATEQTVTIN 986 (1001)
T ss_dssp CCGGGBCCCCBTSTTSGGGGEEEEEEEEE
T ss_pred CcccCcCCCCCCCHHHHHHhceeeEEEEC
Confidence 99999999 56999999999999999875
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.5e-91 Score=742.69 Aligned_cols=438 Identities=19% Similarity=0.276 Sum_probs=402.0
Q ss_pred ccccCCCCCCee-EEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh
Q psy3132 45 FPVYNPANDEHL-ADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL 123 (507)
Q Consensus 45 ~~~~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 123 (507)
++++||+||+++ ++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 9 ~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 88 (510)
T 1ez0_A 9 FYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT 88 (510)
T ss_dssp EEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred EEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 899999999999 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHH--hcCccc----cCCCC-C-ceeEEEeecccEEEEEcCCcccHHhH--HhhHHhHhhcCCe
Q psy3132 124 GEVVYANSFVDWFSEEARR--TYGELV----PSPVK-S-KELLMVREPLGVVGLITPWNFPMAMI--TRKVAPALAAGCT 193 (507)
Q Consensus 124 ~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l~~ALaaGN~ 193 (507)
.|+..+++.++++++.+++ ..+... +...+ + ...+++++|+|||++|+|||||+.+. .+++++||++||+
T Consensus 89 ~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~ 168 (510)
T 1ez0_A 89 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCP 168 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCE
Confidence 9999999999999998875 333222 11111 1 24678999999999999999999985 4999999999999
Q ss_pred EEeccCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc
Q psy3132 194 CVIKPAEDTPLTALALAALA----HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269 (507)
Q Consensus 194 Vvlkps~~~~~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 269 (507)
||+|||+.+|+++.++++++ .++|+|+|++|+|+|+ +.++++.|++||.||.|+||||+.+|+.|++.+++++
T Consensus 169 VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l 245 (510)
T 1ez0_A 169 VIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGN---QRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 245 (510)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCS---CTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred EEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC---cHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccC
Confidence 99999999999999999988 5679999999999984 5678999999999999999999999999999999886
Q ss_pred --cccccccCCCCcEEEcCCCCHH--HHHHHHHHHHHHhcCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCC
Q psy3132 270 --KRLSLELGGNAPFIVYSNANLQ--KAVSGAMAAKFRNCGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 270 --~~~~lelgG~~~~iV~~daDl~--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++ ++
T Consensus 246 ~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~-~~------ 318 (510)
T 1ez0_A 246 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ-QS------ 318 (510)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH-CC------
T ss_pred CCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHh-cC------
Confidence 9999999999999999999999 99999999999999999999999999999 999999999999998 54
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccCCCceeeceEeecCCCC---CCCcccceeeccEEeEec
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKLGSKFFAPTILTNITPD---MLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~ 420 (507)
.||++++.+.+++.++++++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 319 -----~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~ 388 (510)
T 1ez0_A 319 -----PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 388 (510)
T ss_dssp -----CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred -----CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEe
Confidence 4688889999999999999994 7999999997 2899999999988777 999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCH--HHHHHHHhhc--ceeeEEEcCCCC---CCCCCcccC-CCCCCCCCC--chHH
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDI--SQAWRVGKKL--QVGMVGINEGII---SHTEAAFGG-VKESGLGRE--GSRH 490 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~--~~~~~~~~~l--~~G~v~iN~~~~---~~~~~pfGG-~~~SG~g~~--~g~~ 490 (507)
+|+||||+++|+++|||++||||+|. +.++++++++ ++|+|+||++.. ..+.+|||| +|.||+|+. +|++
T Consensus 389 ~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 389 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 99999999999999999999999987 7899999999 799999998764 356899999 799999854 8999
Q ss_pred HHHhchhceEEE
Q psy3132 491 GMEEFTQIKYMC 502 (507)
Q Consensus 491 ~l~~~t~~k~v~ 502 (507)
|+++|++.|++.
T Consensus 469 gl~~~~~~k~~~ 480 (510)
T 1ez0_A 469 AIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhheEEEEc
Confidence 999999988753
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-84 Score=679.43 Aligned_cols=405 Identities=17% Similarity=0.137 Sum_probs=336.0
Q ss_pred cccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHc-------CCC
Q psy3132 46 PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQES-------GKP 118 (507)
Q Consensus 46 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 118 (507)
-++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hh----hhhHhHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCC
Q psy3132 119 PT----ESLGEVVYANSFVDWFSEEARRTYGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGC 192 (507)
Q Consensus 119 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN 192 (507)
.. ++..|+..+++.++++++.+++..+...+.. ..+...++.++|+|||++|+||| |.+.+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 5778999999999999988777666543321 13456789999999999999887 77777 89999999999
Q ss_pred eEEeccCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 193 TCVIKPAEDTPLTALALAALAHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 193 ~Vvlkps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g----~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT----REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT----TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC----CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999 8 9999999997 3567899999999999999999999999999888
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------- 294 (463)
T 2h5g_A 241 GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------- 294 (463)
T ss_dssp SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------
T ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 428 (507)
||+ + ++++++++++|++++.|+... . .++|+ +++|++++||+||||++|++|+|+||||+
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~-~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~ 354 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKFA-S-YLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAID 354 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHHH-C------------------CCSSCCCCSSEEEEEEESSHHHHHH
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCccc-c-cCccC--------CCCchHHhccccCceEEEEEeCCHHHHHH
Confidence 122 2 234677788999998554322 1 35443 57899999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC--CC--chHHHHHhchhceEEEec
Q psy3132 429 VANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG--RE--GSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 429 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g--~~--~g~~~l~~~t~~k~v~~~ 504 (507)
++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+| ++ +|++|+++||+.|+|.++
T Consensus 355 ~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~ 434 (463)
T 2h5g_A 355 HIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRG 434 (463)
T ss_dssp HHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEEC
T ss_pred HHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEEC
Confidence 99999999999999999999999999999999999987766788999999999999 65 999999999999999876
Q ss_pred c
Q psy3132 505 N 505 (507)
Q Consensus 505 ~ 505 (507)
+
T Consensus 435 ~ 435 (463)
T 2h5g_A 435 K 435 (463)
T ss_dssp S
T ss_pred C
Confidence 3
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=7.4e-82 Score=661.49 Aligned_cols=418 Identities=17% Similarity=0.210 Sum_probs=367.7
Q ss_pred EEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHH
Q psy3132 57 ADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDW 135 (507)
Q Consensus 57 ~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~ 135 (507)
.+++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++. +....+ ++
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~---~~ 80 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFAS---KH 80 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHH---HH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHH---HH
Confidence 34566788999999999999999999999999999999999999999999999999999999988753 332333 33
Q ss_pred HHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHH----H
Q psy3132 136 FSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA----A 211 (507)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~----~ 211 (507)
+..+..............+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++ +
T Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 81 VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 333333221111111124567889999999999999999999999999999999999999999999999998765 4
Q ss_pred HHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccC-CCCcEEEcCCCCH
Q psy3132 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELG-GNAPFIVYSNANL 290 (507)
Q Consensus 212 ~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV~~daDl 290 (507)
++.++|+|+|++|+|+++ +.+.++.|++||+||.|+||||+.+ .+.+++++||+ +|+| ||+|+||++|||+
T Consensus 161 ~~~~aG~P~gvv~vv~g~---~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl 232 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVP---TIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANI 232 (464)
T ss_dssp HHHHTTCCTTSEEECSSC---CHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCH
T ss_pred HHHHhCCCCCeEEEEeCC---CHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCH
Confidence 568999999999999985 6789999999999999999999985 45566788999 7888 9999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHH-------HhccccCCCC-CCCCCccCccCCHHHHHHH
Q psy3132 291 QKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI-------TKSFIQGDTS-KNDKCNLGPLINLAQVEKV 362 (507)
Q Consensus 291 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~~g~~~-~~~~~~~gpl~~~~~~~~~ 362 (507)
+.|++.+++++|+|+||.|++++|||||+++||+|+++|+++. .+ +++|+|. +++ +++||+++.++++++
T Consensus 233 ~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~-~~~g~~~~~~~-~~~gp~i~~~~~~~i 310 (464)
T 3k9d_A 233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEA-VQLGKFILRPN-GSMNPAIVGKSVQHI 310 (464)
T ss_dssp HHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHH-HHHHHHHBCTT-SCBCGGGTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhh-hhhcccccCCC-CccCcccCHHHHHHH
Confidence 9999999999999999999999999999999999999999885 44 7889887 667 899999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHH----HHHhcCCCCcE
Q psy3132 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL----CVANNSNTGLA 438 (507)
Q Consensus 363 ~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~ 438 (507)
.++++.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+
T Consensus 311 ~~~~~~a~~~ga~vl~gg~~---------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~ 374 (464)
T 3k9d_A 311 ANLAGLTVPADARVLIAEET---------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHT 374 (464)
T ss_dssp HHHTTCCCCTTCCEEEEECC---------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEE
T ss_pred HHHhhhhhcCCCEEEEcCCC---------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCe
Confidence 99999888899999999853 456777765 89999999999999999997 79999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 439 GYFFTNDISQAWRVGKKLQVGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 439 a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+||||+|.+.+++|++++++|+|+||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|.+.
T Consensus 375 a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 375 LIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999999764 357899998 78899999999999999999999764
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2.8e-82 Score=663.17 Aligned_cols=394 Identities=15% Similarity=0.153 Sum_probs=324.4
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh-HhHHH-HHHHHHHHHHH
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL-GEVVY-ANSFVDWFSEE 139 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 139 (507)
.+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999999999999998 8885 88888 88899999888
Q ss_pred HHHhc------CccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHH
Q psy3132 140 ARRTY------GELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211 (507)
Q Consensus 140 ~~~~~------~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~ 211 (507)
++... +...+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 77665 3322211 12456789999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEE
Q psy3132 212 LAH----E----AQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283 (507)
Q Consensus 212 ~l~----~----aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 283 (507)
++. + +|+|+|++|+|+ + +.++++.|..||+||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~---~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-T---RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-C---C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEE
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-C---HHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceE
Confidence 995 8 999999999999 5 557899999999999999999999999999887 699999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc---CCCCCCCCCccCccCCHHHHH
Q psy3132 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ---GDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 284 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~---g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|++++++ +++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~-~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLE-GGVTIHATKDL---------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHH-HCCCBEECHHH----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHh-cCCeecCCHHH----------------
Confidence 99999999999999999999999 99999999999999 9999999999999 876 66421
Q ss_pred HHHHH-HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEE
Q psy3132 361 KVDSI-VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439 (507)
Q Consensus 361 ~~~~~-i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 439 (507)
.++ +++++ ++++||+ | +.||++ +++++++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 307 --~~~~i~~a~----~~~~gG~------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a 370 (468)
T 1vlu_A 307 --KTAYFDKLN----ELGKLTE------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTD 370 (468)
T ss_dssp --HHHHHHHHH----HHTCCCH------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEE
T ss_pred --hcccccccc----eeeccCC------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceE
Confidence 344 56555 3667774 4 689997 78899999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCccc-----CCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFG-----GVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfG-----G~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.+.++++++++++|+|+||++....+.+||| |+|.||+|++ |++|+++||+.|+|.++
T Consensus 371 ~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~ 439 (468)
T 1vlu_A 371 AIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRG 439 (468)
T ss_dssp EEECSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEEC
Confidence 9999999999999999999999999877667788999 9999999999 99999999999999875
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=5.5e-80 Score=640.24 Aligned_cols=388 Identities=19% Similarity=0.256 Sum_probs=344.1
Q ss_pred HHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh--------HhHHHHHH
Q psy3132 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL--------GEVVYANS 131 (507)
Q Consensus 64 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 131 (507)
.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5554 68999999
Q ss_pred HHHHHHHHHHHhcCccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHH
Q psy3132 132 FVDWFSEEARRTYGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209 (507)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l 209 (507)
.++++++++++ .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 33322211 12445788999999999999886 478999999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 210 AALAH----EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 210 ~~~l~----~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
++++. ++|+|+|++|+|+|+ ++.++++.|..||+||.|+||||+.+|+.|++.+ .||+++|||||||+||+
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~--~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENT--DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCC--CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHcCCCcccEEEecCC--ChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 99998 689999999999973 1356788999999999999999999999999887 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++ ++++
T Consensus 245 ~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRK-HGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHH-TTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHH-cCCe-------------------------
Confidence 999999999999999999999 9999999999999999999999999988 5431
Q ss_pred HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
++||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 298 -----------~~gg~~~---~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 -----------VRGCEKT---RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp -----------EEECHHH---HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred -----------eecChhh---hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 2233321 13 33 896 34578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC----CCchHHHHHhchhceEEEecc
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG----REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~ 505 (507)
.+.++++++++++|+|+||++....+.+||||.|.||+| +++|++|+++||+.|+|.+++
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999999999987766778999999999997 468999999999999998864
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.3e-79 Score=640.59 Aligned_cols=388 Identities=18% Similarity=0.210 Sum_probs=333.5
Q ss_pred HHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh--------HhHHHHHH
Q psy3132 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL--------GEVVYANS 131 (507)
Q Consensus 64 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 131 (507)
.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 3554 37889999
Q ss_pred HHHHHHHHHHHhcCccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHH
Q psy3132 132 FVDWFSEEARRTYGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209 (507)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l 209 (507)
.+++++.+++.. +...+. ...+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999998876532 332221 123567889999999999999998 8 68899999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCCCCch-HHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 210 AALA----HEAQIPKGVLNVVTSSRTNAN-SVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 210 ~~~l----~~aGlP~gvv~~v~g~~~~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++++ .++|+|+|++|+|+|+ +. .+++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~---~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETA---DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCC---CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEEeCC---CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEE
Confidence 9987 7999999999999974 33 5788888999999999999999999998876 6999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc---CCCCCCCCCccCccCCHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ---GDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~---g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++ +++ |+|.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~~~~g~p~------------------ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYRE-KGVELRVDAD------------------ 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHH-TTCEEEECHH------------------
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHH-cCCeecCCHH------------------
Confidence 9999999999999999999999 9999999999999999999999999998 777 5532
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
..++++++. .| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 316 ~~~~i~~a~----------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 371 (444)
T 4ghk_A 316 ARAVLEAAG----------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAI 371 (444)
T ss_dssp HHHHHHHTT----------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEE
T ss_pred HHHHHHhcc----------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 134555431 12 12 3467899999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC----CCchHHHHHhchhceEEEec
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG----REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+|.+.++++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+|+++
T Consensus 372 ~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~ 438 (444)
T 4ghk_A 372 VTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG 438 (444)
T ss_dssp ECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence 9999999999999999999999998777788999999999998 67899999999999999875
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.6e-76 Score=618.99 Aligned_cols=410 Identities=18% Similarity=0.234 Sum_probs=341.0
Q ss_pred ecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHHHH-HHH
Q psy3132 59 VPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV-DWF 136 (507)
Q Consensus 59 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 136 (507)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.+++++++|++++++|+|||..+++. |+..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999974 666666655 333
Q ss_pred HHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH--
Q psy3132 137 SEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH-- 214 (507)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~-- 214 (507)
.. .+..+. .+ ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~--~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 32 111111 11 1234567889999999999999999999999999999999999999999999999998888765
Q ss_pred --HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHH
Q psy3132 215 --EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292 (507)
Q Consensus 215 --~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~ 292 (507)
++|+|+|++|+|+++ +.++++.|++||+|+.|+||||+.+++ .+++++||+++|+|||+|+||++|||++.
T Consensus 157 ~~~aG~P~gvv~~v~g~---~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQP---SVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHTTCCTTSEEECSSC---CHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHcCCCcCcEEEEcCC---CHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 789999999999985 678999999999999999999999755 45567899999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC
Q psy3132 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK 372 (507)
Q Consensus 293 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 372 (507)
|++.+++++|+|+||.|+++++||||+++||+|+++|++ ..||++++.+++++.++++++...
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~-----------------~~gpli~~~~~~~v~~~i~~~~~~ 292 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS-----------------HKAHVLSKTDADKVRKVLLIDGAL 292 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHT-----------------TTEEECCHHHHHHHHHHHEETTEE
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHH-----------------hCCCcCCHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999988863 248999999999999999876666
Q ss_pred CCeEEeCCCccc--cCCCceeeceE-------eecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCC----CCcEE
Q psy3132 373 GAKVILGGGKVT--KLGSKFFAPTI-------LTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSN----TGLAG 439 (507)
Q Consensus 373 Ga~v~~gg~~~~--~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a 439 (507)
|+++ +||.... ...|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||++
T Consensus 293 ~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta 370 (452)
T 3my7_A 293 NAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTS 370 (452)
T ss_dssp CGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEE
Confidence 7776 4765421 11489999997 778899999876 89999999999999999999999985 99999
Q ss_pred EEecCCHHHHHH---HHhhcceeeEEEcCCCCCCCCCcccCCCC----------------CCCCCCchHHHHHhchhceE
Q psy3132 440 YFFTNDISQAWR---VGKKLQVGMVGINEGIISHTEAAFGGVKE----------------SGLGREGSRHGMEEFTQIKY 500 (507)
Q Consensus 440 ~v~t~d~~~~~~---~~~~l~~G~v~iN~~~~~~~~~pfGG~~~----------------SG~g~~~g~~~l~~~t~~k~ 500 (507)
+|||+|.+.+++ +++++++|+|+||++. ||||.|. -|-+...+.-+.+++.+.|+
T Consensus 371 ~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~ 444 (452)
T 3my7_A 371 GLYTNQDVNADRIRYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKT 444 (452)
T ss_dssp EEESCTTTCHHHHHHHHHHCCCSEEEESCCC------C----------------------------CCCCCGGGGEEEEE
T ss_pred EEEcCCHHHHHHHHHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeE
Confidence 999999888777 9999999999999864 4444332 22222344457788888888
Q ss_pred EEec
Q psy3132 501 MCFG 504 (507)
Q Consensus 501 v~~~ 504 (507)
|..+
T Consensus 445 v~~~ 448 (452)
T 3my7_A 445 VAKR 448 (452)
T ss_dssp EECC
T ss_pred EEee
Confidence 8654
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.64 E-value=0.031 Score=55.83 Aligned_cols=259 Identities=17% Similarity=0.191 Sum_probs=146.9
Q ss_pred CCCceeEEEeecccEEEEEcCCc---ccHHhHHhhHHhHhhcCCe--EEeccCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q psy3132 152 VKSKELLMVREPLGVVGLITPWN---FPMAMITRKVAPALAAGCT--CVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226 (507)
Q Consensus 152 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v 226 (507)
.+|.....++.|+--|++..|.- || .+.++..+||-.+|.. |+.-|++.- ...-.+.-..+.+|... +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EE
Confidence 45667778899999999999943 54 3455678999999986 334454321 11222333445556432 33
Q ss_pred eCCCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhccccccccccc-CCCCcEEE--cCCCCHHHHHHHHHH
Q psy3132 227 TSSRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL-GGNAPFIV--YSNANLQKAVSGAMA 299 (507)
Q Consensus 227 ~g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel-gG~~~~iV--~~daDl~~aa~~i~~ 299 (507)
.- +|...-.+|. .-|.||.|+=.|..-+..+=..-.+. +-..+ .|.+=++| ++++|.+.++..++.
T Consensus 192 ~v---GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~----VgIDm~AGPSEilViAD~~a~p~~vAaDLls 264 (423)
T 4gic_A 192 RI---GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQ----VGIDMVAGPSEILVISDGRTDPDWIAMDLFS 264 (423)
T ss_dssp CC---CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTT----BEECCCCCCCEEEEEECSCSCHHHHHHHHHH
T ss_pred Ec---CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCC----cCcccccccceEEEEeCCCCCHHHHHHHHHH
Confidence 32 2555555554 36889999999998765433222221 22222 35554433 556899998888876
Q ss_pred HHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEe
Q psy3132 300 AKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVIL 378 (507)
Q Consensus 300 ~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~ 378 (507)
-+=.. -.+. .++|..+ ++|.++..+++.+.++. +... + .+..+.. .|
T Consensus 265 QAEHd----~~a~-~iLvT~s--~~la~~V~~~i~~~l~~-------------l~r~---~----i~~~sl~~~g----- 312 (423)
T 4gic_A 265 QAEHD----EDAQ-AILISPD--AAHLEAVQASIERLLPG-------------MERA---E----VIRTSLERRG----- 312 (423)
T ss_dssp HHTTC----TTCE-EEEEESC--HHHHHHHHHHHHHHGGG-------------CTTH---H----HHHHHHHHHC-----
T ss_pred hhccC----CCCe-EEEEeCc--HHHHHHHHHHHHHHHhh-------------CccH---H----HHHHHHhcCc-----
Confidence 55322 2333 3455443 34455555444441110 1111 1 1122221 12
Q ss_pred CCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-
Q psy3132 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ- 457 (507)
Q Consensus 379 gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~- 457 (507)
.++.++|.+|+++++|..-.= -.-|.++|.. .+..+++
T Consensus 313 -------------------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~n 351 (423)
T 4gic_A 313 -------------------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRN 351 (423)
T ss_dssp -------------------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCC
T ss_pred -------------------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcE
Confidence 133468899999999985443 4667788864 5778886
Q ss_pred eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 458 VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 458 ~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
+|.|++...+. .++-+|-+ |..|+.+.-+.+.|++.-++
T Consensus 352 AGaIFlG~~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 352 AGAIFMGRYTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp CSEEEEC----------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred eceeecCCCCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 99999986543 13445554 45666666678888875443
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=97.25 E-value=0.08 Score=52.97 Aligned_cols=256 Identities=16% Similarity=0.166 Sum_probs=149.9
Q ss_pred CCceeEEEeecccEEEEEcCC---cccHHhHHhhHHhHhhcCCeEEe--ccCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q psy3132 153 KSKELLMVREPLGVVGLITPW---NFPMAMITRKVAPALAAGCTCVI--KPAEDTPLTALALAALAHEAQIPKGVLNVVT 227 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~ALaaGN~Vvl--kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~ 227 (507)
+|.....++.|+--|++..|. -|| .+.++..+||-.+|..=|+ -|+...|. +.-..+.+|... +..
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~----iL~AA~l~Gv~e----Iy~ 183 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VFN 183 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EEE
T ss_pred CCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHH----HHHHHHHcCCCE----Eee
Confidence 355666788999999999996 355 4556678999999986554 44423332 333445566443 232
Q ss_pred CCCCCchHHHHhhh----cCCCccEEEEeCCHHHH--HHHHHhhccccccccccc-CCCCcEEE--cCCCCHHHHHHHHH
Q psy3132 228 SSRTNANSVGKLLC----TSPHVAGISFTGSTQVG--KILYSHCSQGIKRLSLEL-GGNAPFIV--YSNANLQKAVSGAM 298 (507)
Q Consensus 228 g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g--~~i~~~~~~~~~~~~lel-gG~~~~iV--~~daDl~~aa~~i~ 298 (507)
- +|...-.+|. .-|+||+|+=.|..-+. |+..... ...+-..+ .|.+=++| +++||.+..+..++
T Consensus 184 v---GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~---~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLL 257 (434)
T 1kae_A 184 V---GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR---LDGAAIDMPAGPSEVLVIADSGATPDFVASDLL 257 (434)
T ss_dssp C---CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC---TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHH
T ss_pred c---ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh---cCccccCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 2 1555444554 46889999999988654 3332111 11122222 35554444 56789999888887
Q ss_pred HHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEe
Q psy3132 299 AAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378 (507)
Q Consensus 299 ~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 378 (507)
.-+=.. -.+. .++|..+ ++|.++..+++.+.+. . +.. . +.++.+.
T Consensus 258 sQAEHd----~~a~-aiLvT~s--~~la~~V~~ev~~ql~----------~---lpr---~----~ia~~sl-------- 302 (434)
T 1kae_A 258 SQAEHG----PDSQ-VILLTPA--ADMARRVAEAVERQLA----------E---LPR---A----ETARQAL-------- 302 (434)
T ss_dssp HHHTTC----TTCE-EEEEESC--HHHHHHHHHHHHHHHT----------T---CTT---H----HHHHHHH--------
T ss_pred HHhccC----CCCc-EEEEECC--HHHHHHHHHHHHHHHH----------h---CCh---H----HHHHHHH--------
Confidence 655322 2333 3444433 3444444444443110 0 001 0 1112211
Q ss_pred CCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-
Q psy3132 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ- 457 (507)
Q Consensus 379 gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~- 457 (507)
..- .|+.++|++||++++|..-.= -.-|.++|. +.+..+++
T Consensus 303 ---------------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~n 344 (434)
T 1kae_A 303 ---------------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITS 344 (434)
T ss_dssp ---------------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCS
T ss_pred ---------------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCc
Confidence 111 345579999999999986444 467888886 45678886
Q ss_pred eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 458 VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 458 ~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
+|.|++..++. .++-+|-+| ..|+.|.-+++.|++.-++
T Consensus 345 AGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 345 AGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp CSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEE
T ss_pred ccchhcCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeE
Confidence 99999997654 245566555 5666666778888876443
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=70.37 E-value=9.5 Score=29.88 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc
Q psy3132 354 INLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432 (507)
Q Consensus 354 ~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 432 (507)
.++..+++..+....+++ .|++++..|.. |.++.... .+-+.|++|+|.+.|.++.|+
T Consensus 15 ~d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~----------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s 73 (99)
T 2fiu_A 15 RDSERYKDYVSTAKPAFERFGANFLARGGS----------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNS 73 (99)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEESCC----------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHcCcEEEEECCC----------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcC
Confidence 455555555555555544 48888876653 34554321 236789999999999999987
Q ss_pred CCC
Q psy3132 433 SNT 435 (507)
Q Consensus 433 ~~~ 435 (507)
.+|
T Consensus 74 ~~Y 76 (99)
T 2fiu_A 74 PEY 76 (99)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 56
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=48.38 E-value=42 Score=25.74 Aligned_cols=62 Identities=13% Similarity=0.195 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHHHHC-CCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc
Q psy3132 354 INLAQVEKVDSIVQDAISK-GAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432 (507)
Q Consensus 354 ~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 432 (507)
.++..+++..+....++++ |++++..| . +.++.+.. -..-+.|++|+|.+.|.++.|+
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~----------~~~lEG~~----------~~~~~viieFps~~aa~a~y~S 72 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S----------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHS 72 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E----------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c----------cccccCCC----------CCCeEEEEECCCHHHHHHHHCC
Confidence 4566666666666666554 78888766 3 23444321 1256889999999999999998
Q ss_pred CCCC
Q psy3132 433 SNTG 436 (507)
Q Consensus 433 ~~~g 436 (507)
.+|-
T Consensus 73 peYq 76 (94)
T 3lo3_A 73 EEYQ 76 (94)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 57
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=45.46 E-value=21 Score=32.50 Aligned_cols=70 Identities=11% Similarity=0.105 Sum_probs=48.1
Q ss_pred HhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 181 ~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
+..++..+.+||-||++.++. .....+..+|... ||.|.+++++.+ ++- ...-..+.+.++.+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~--~~~~s~~~~L~~l-LP~~c~~l~~~s----~~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDV--DLVQSAFEVLRTM-LPVGCVRIIPYS----SQY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCH--HHHHHHHHHHGGG-SCGGGCCEEEEE----SSC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCCH--HHHHHHHHHHHHh-CCHHHHhccccc----hhh----cchhheeeecCCCCcccCcc
Confidence 456777889999999998874 3445567788888 999999999743 111 12234667777766554444
Q ss_pred H
Q psy3132 261 L 261 (507)
Q Consensus 261 i 261 (507)
+
T Consensus 90 v 90 (226)
T 3v42_A 90 V 90 (226)
T ss_dssp H
T ss_pred c
Confidence 3
No 58
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=43.10 E-value=28 Score=29.58 Aligned_cols=115 Identities=12% Similarity=0.021 Sum_probs=72.0
Q ss_pred cEEEEEcCCcc-cHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHH-cCCCCCcEEEEeCCCCCchHHHHhhhc
Q psy3132 165 GVVGLITPWNF-PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHE-AQIPKGVLNVVTSSRTNANSVGKLLCT 242 (507)
Q Consensus 165 Gvv~~i~p~n~-P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~-aGlP~gvv~~v~g~~~~~~~~~~~L~~ 242 (507)
|.|+++..-+- +-...+.+-...+..|-.++- +.-|+ +.|++ .|+|...++-++.. +...+++.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eG--G~p~I~d~I-~ 79 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTG----NLISRATGMNVNAMLSGPMG--GDQQVGALI-S 79 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHH----HHHHHHHCCCCEEECCGGGT--HHHHHHHHH-H
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHHhCceeEEEEecCCC--CCchHHHHH-H
Confidence 66666555443 555555556666777887764 22333 45555 79997766644421 123455555 5
Q ss_pred CCCccEEEEeCC-------HHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcC
Q psy3132 243 SPHVAGISFTGS-------TQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCG 306 (507)
Q Consensus 243 ~~~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~G 306 (507)
+..|+.|+||-+ ..-+..|.+.|..+..|+.-- + ..++.++.+.+++..
T Consensus 80 ~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~--------------l-atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 80 EGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN--------------V-ATADFIIQSPHFNDA 135 (152)
T ss_dssp TTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS--------------H-HHHHHHHTSGGGGSC
T ss_pred CCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC--------------H-HHHHHHHHHHhcccc
Confidence 568999999876 457788999998887776533 3 345666666665553
No 59
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=39.21 E-value=46 Score=27.87 Aligned_cols=66 Identities=8% Similarity=-0.006 Sum_probs=44.1
Q ss_pred cCCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHh
Q psy3132 353 LINLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVAN 431 (507)
Q Consensus 353 l~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 431 (507)
+.++..+++..+....++. -|++++..|... .++.+... |.+ .-+.|++|.|.+.++++.|
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~~----------~~lEG~~~-------e~~-~~~viieFPS~~aa~a~y~ 106 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQFE----------LMLIGPQD-------EHW-DHVFIAEYPSVAAFVEMIR 106 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE----------EEEESCTT-------CCC-SEEEEEEESCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCCc----------eeEECCCC-------CCC-CeEEEEECCCHHHHHHHHc
Confidence 5667777776666665554 488888776542 34443221 111 5688999999999999988
Q ss_pred cCCCC
Q psy3132 432 NSNTG 436 (507)
Q Consensus 432 ~~~~g 436 (507)
+..|-
T Consensus 107 SpeYq 111 (143)
T 3hhl_A 107 DPVYR 111 (143)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 76553
No 60
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=33.84 E-value=11 Score=31.33 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=47.6
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCCCCchHHHHhhhcCCCccEEEEeCC-----
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHE-AQIPKGVLNVVT-SSRTNANSVGKLLCTSPHVAGISFTGS----- 254 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~-aGlP~gvv~~v~-g~~~~~~~~~~~L~~~~~v~~v~ftGs----- 254 (507)
.+-...|..|-.++- +.-|+ +.|++ .|+|...++-++ + +...+++.+ .+..|+.|+||-+
T Consensus 22 a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~e---G~p~I~d~I-~~geIdlVInt~~pl~~~ 88 (134)
T 2xw6_A 22 CQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLG---GDQQMGARV-AEGRILAVIFFRDPLTAQ 88 (134)
T ss_dssp HHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGT---HHHHHHHHH-HTTCEEEEEEECCTTTCC
T ss_pred HHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCC---CcchHHHHH-HCCCccEEEEccCcccCC
Confidence 333444555665543 33344 44555 799987776555 3 134556655 4568999999976
Q ss_pred --HHHHHHHHHhhcccccccc
Q psy3132 255 --TQVGKILYSHCSQGIKRLS 273 (507)
Q Consensus 255 --~~~g~~i~~~~~~~~~~~~ 273 (507)
..-+..|.+.|..+..|+.
T Consensus 89 ~h~~D~~~IrR~A~~~~IP~~ 109 (134)
T 2xw6_A 89 PHEPDVQALLRVCDVHGVPLA 109 (134)
T ss_dssp TTSCCSHHHHHHHHHHTCCEE
T ss_pred CccchHHHHHHHHHHcCCCeE
Confidence 2345667777776666654
No 61
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=33.70 E-value=1.6e+02 Score=23.76 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHCCCeEEeCCCccccCCCcee-----eceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHh
Q psy3132 357 AQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFF-----APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVAN 431 (507)
Q Consensus 357 ~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~-----~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 431 (507)
...+...+++++..+.|. ++.|+...+...+..+ .|+|.++.-.+ ..|..|= +.|+.++|.|||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG-~~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGG-FYLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEE-EEEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----Cccccee-EEEEEeCCHHHHHHHHH
Confidence 445566667776666674 3333221110012222 24444332212 3455544 56678999999999998
Q ss_pred cCCCC
Q psy3132 432 NSNTG 436 (507)
Q Consensus 432 ~~~~g 436 (507)
..++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 87764
No 62
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=30.59 E-value=1.1e+02 Score=21.43 Aligned_cols=36 Identities=11% Similarity=0.246 Sum_probs=26.3
Q ss_pred HHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 73 SAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 73 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.++.....|..++.++|..........-.....++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566889999999999988776665555555544
No 63
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=28.29 E-value=30 Score=28.89 Aligned_cols=64 Identities=8% Similarity=0.052 Sum_probs=44.1
Q ss_pred HHHHHHcCCCCCcEEEEeCCCCCc----hHHHHhhhcCCCccEEEEeCCH-----HHHHHHHHhhccccccccccc
Q psy3132 210 AALAHEAQIPKGVLNVVTSSRTNA----NSVGKLLCTSPHVAGISFTGST-----QVGKILYSHCSQGIKRLSLEL 276 (507)
Q Consensus 210 ~~~l~~aGlP~gvv~~v~g~~~~~----~~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~~~~~~~~~~~lel 276 (507)
++.|++.|+|...++-++..+ . +.+.+.+. +..|+.|++|-+. .-+..|.+.|..+..|++-.+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg--~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEG--QNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-------CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCC--cccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 455678999988777665310 1 34666554 4579999998654 477888888888888876544
No 64
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.44 E-value=1.5e+02 Score=22.72 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=30.0
Q ss_pred HHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHc
Q psy3132 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQES 115 (507)
Q Consensus 74 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 115 (507)
++.....|+.++.++|..+.......-+.+..++...-....
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~ 90 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 90 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344557899999999999888877766666666665544433
No 65
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=24.45 E-value=33 Score=29.93 Aligned_cols=119 Identities=11% Similarity=-0.047 Sum_probs=75.1
Q ss_pred eecc-cEEEEEcCCcc-cHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHH-cCCCCCcEEEEeCCCCCchHHH
Q psy3132 161 REPL-GVVGLITPWNF-PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHE-AQIPKGVLNVVTSSRTNANSVG 237 (507)
Q Consensus 161 ~~P~-Gvv~~i~p~n~-P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~-aGlP~gvv~~v~g~~~~~~~~~ 237 (507)
.-|. |.|+++..-+- +-...+.+-...|+.|-.++- +.-|+ +.|.+ .|+|...++-++.. +...++
T Consensus 23 ~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eG--G~pqI~ 91 (178)
T 1vmd_A 23 FMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLG--GDQQIG 91 (178)
T ss_dssp EECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGT--HHHHHH
T ss_pred eCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCC--CCchHH
Confidence 3343 76766655444 555666666677778888774 34444 44555 79997766544421 123455
Q ss_pred HhhhcCCCccEEEEeCC-------HHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcC
Q psy3132 238 KLLCTSPHVAGISFTGS-------TQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCG 306 (507)
Q Consensus 238 ~~L~~~~~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~G 306 (507)
+.+ ....|++|+||-+ ..-+..|.+.|..+.+|+.-- + ..|+.++.+.+++..
T Consensus 92 d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn--------------l-atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT--------------R-STADFLISSPLMNDV 151 (178)
T ss_dssp HHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS--------------H-HHHHHHHHSGGGGSC
T ss_pred HHH-HCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeC--------------H-HHHHHHHHHHhcccc
Confidence 554 5568999999876 235688888888877776533 3 345667777766653
No 66
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.07 E-value=1.5e+02 Score=21.96 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=26.3
Q ss_pred HHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 73 SAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 73 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.++.....|..++.++|..+.......-+.+..++.
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556789999999999888777766665555543
No 67
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=20.49 E-value=75 Score=20.78 Aligned_cols=27 Identities=30% Similarity=0.282 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHcC
Q psy3132 90 GIVLKRWLKELEGNKQALAEIMTQESG 116 (507)
Q Consensus 90 ~~~L~~~a~~l~~~~~~l~~~~~~e~G 116 (507)
.++|..+...|.+.++++++++..|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888888999999999988876653
No 68
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=20.38 E-value=1.5e+02 Score=21.24 Aligned_cols=36 Identities=14% Similarity=0.262 Sum_probs=29.0
Q ss_pred cCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q psy3132 190 AGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSS 229 (507)
Q Consensus 190 aGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~ 229 (507)
.+|-+|+|-.|-. +..++.++.+.++|. ++-.+-|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6899999987765 678888899887666 88888763
No 69
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=20.35 E-value=4.2e+02 Score=26.15 Aligned_cols=85 Identities=9% Similarity=0.023 Sum_probs=51.6
Q ss_pred HhHhhc-CCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 185 APALAA-GCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 185 ~~ALaa-GN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++|.. .+.-|+--....+..+..+++.+.+.|+|.. .+..+ +.+--+.|+.++++|.|+.+-.+..-..+..
T Consensus 36 ~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~--~~~~~----~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~ 109 (444)
T 2ixa_A 36 VENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPA--KVFGN----GNDDYKNMLKDKNIDAVFVSSPWEWHHEHGV 109 (444)
T ss_dssp HHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCC--EEECS----STTTHHHHTTCTTCCEEEECCCGGGHHHHHH
T ss_pred HHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCC--ceecc----CCCCHHHHhcCCCCCEEEEcCCcHHHHHHHH
Confidence 445543 3444444455556666667776666777632 22331 1122456777789999998877776666666
Q ss_pred hhcccccccccc
Q psy3132 264 HCSQGIKRLSLE 275 (507)
Q Consensus 264 ~~~~~~~~~~le 275 (507)
.+.+..|.|..|
T Consensus 110 ~al~aGkhV~~E 121 (444)
T 2ixa_A 110 AAMKAGKIVGME 121 (444)
T ss_dssp HHHHTTCEEEEC
T ss_pred HHHHCCCeEEEe
Confidence 666666666655
No 70
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=20.35 E-value=1.6e+02 Score=21.61 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=28.9
Q ss_pred cCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q psy3132 190 AGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSS 229 (507)
Q Consensus 190 aGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~ 229 (507)
.+|-+|+|-.|-. +..++.++.+..+|. ++-.|-|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999988765 678888899887765 88888763
Done!