RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3132
(507 letters)
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 452 bits (1165), Expect = e-156
Identities = 174/481 (36%), Positives = 265/481 (55%), Gaps = 14/481 (2%)
Query: 29 YTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQ 83
YT+ +IN EW S KKFPV+NPA +E L +V + EDV A+ +A++AF+ W
Sbjct: 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRT 72
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYAN-SFVDWFSEEARR 142
ERG +L + +E ++ LA + GK + + + + + + A +
Sbjct: 73 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 132
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
G +P + EP+GV G I PWNFP+ M K+ PAL+ G T V+KPAE T
Sbjct: 133 IQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 191
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PLTAL + +L EA P GV+N+V + G + + V ++FTGST+VGK++
Sbjct: 192 PLTALHMGSLIKEAGFPPGVVNIVPGY---GPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248
Query: 263 SHCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
+ +KR+SLELGG +P IV+++A+L AV A F + GQ C+AA+R ++E +
Sbjct: 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 308
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
+D+FV VE K ++ G+ + GP I+ Q EK+ +++ +GAK+ GGG
Sbjct: 309 YDEFVRR-SVERAKKYVLGNPLTPG-VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 366
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PT+ +++T DM EE+FGPV +KFK+ ++ + ANN+ GL+
Sbjct: 367 PWGNKGY-FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGI 425
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
FTNDI +A V LQ G V +N + + FGG K SG GRE +G E+T++K +
Sbjct: 426 FTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 485
Query: 502 C 502
Sbjct: 486 T 486
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 451 bits (1160), Expect = e-156
Identities = 168/481 (34%), Positives = 256/481 (53%), Gaps = 14/481 (2%)
Query: 29 YTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQ 83
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 13 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRR 72
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESLGEVVYANSFVDWFSEEARR 142
RG +L R +E ++ LA + T ++GKP L ++ + +++ A +
Sbjct: 73 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 132
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
+G+ +P EP+GV G I PWNFP+ M K+ PALA G V+K AE T
Sbjct: 133 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 191
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PLTAL +A L EA P GV+N+V + G + + V ++FTGST++G+++
Sbjct: 192 PLTALYVANLIKEAGFPPGVVNIVPGF---GPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248
Query: 263 SHC-SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
S +KR++LELGG +P I+ S+A++ AV A A F N GQ A +R +QE +
Sbjct: 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDI 308
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
+D+FVE V KS + G+ + GP ++ Q +K+ + +GAK++ GGG
Sbjct: 309 YDEFVER-SVARAKSRVVGNPFDSK-TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA
Sbjct: 367 IAADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 425
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
FT D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K +
Sbjct: 426 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 485
Query: 502 C 502
Sbjct: 486 T 486
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 431 bits (1110), Expect = e-148
Identities = 170/483 (35%), Positives = 252/483 (52%), Gaps = 15/483 (3%)
Query: 28 TYTQAYINGEWVHSSKK---FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84
T Y G + S PV+ PA L + G E+V A+ SA+ A+ +WS+
Sbjct: 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKM 77
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY 144
ER V+ + + + +A++ +GK TE+ ++ A +++++ A
Sbjct: 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLS 137
Query: 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
G+ + P REPLGV I WN+P + K APALA G V KP+ TP+
Sbjct: 138 GQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
T + LA + HEA +P G++NVV G LLC P+VA +SFTGS GK +
Sbjct: 197 TGVILAEIFHEAGVPVGLVNVVQGGAE----TGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
++ +K ++LELGG +P +++ + L+ AV GA+ A F GQ C R +Q ++ Q
Sbjct: 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
F+E + V+ TK+ + GD + +G LI+ Q++KV V A +GA+V+ GG +T
Sbjct: 313 FLEEV-VKRTKAIVVGDP-LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT 370
Query: 385 KLGSK-----FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439
K F +P +L N DM C EE+FGPV + F TEEE L ANN+ GLA
Sbjct: 371 PSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLAS 430
Query: 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT DIS+A RV L+ G IN IS E FGG K SG GRE + ++ ++Q+K
Sbjct: 431 GVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLK 490
Query: 500 YMC 502
+
Sbjct: 491 TVI 493
>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW
{Escherichia coli [TaxId: 562]}
Length = 474
Score = 398 bits (1022), Expect = e-135
Identities = 172/475 (36%), Positives = 251/475 (52%), Gaps = 8/475 (1%)
Query: 30 TQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+ INGE V +K PVYNPA + L ++ + E V A+ +A AF +W QTTPK
Sbjct: 3 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKV 62
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R L + +E N Q AE+ ++ GKP + + + A V F A R L
Sbjct: 63 RAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA 122
Query: 149 PSPVKSKELLMV-REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
M+ R+PLGVV I PWN+P+ M K+APALAAG V+KP+E TPLTAL
Sbjct: 123 AGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 182
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
LA LA + P GV+N++ +VG L P V +S TGS G+ + SH +
Sbjct: 183 KLAELAKDI-FPAGVVNILFGR---GKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
IKR +ELGG AP IV+ +A+++ V G + N GQ C AA R Q+ ++D VE
Sbjct: 239 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 298
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L + ++ LGPL +LA +E+V V++A + G ++ GG+ K
Sbjct: 299 KLGAAVATLKS--GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 356
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
++APT+L D +EVFGPV F EE+ + AN+S GLA +T D+
Sbjct: 357 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVG 416
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
+A RV +LQ G +N + +E GG K SG G++ S +G+E++T ++++
Sbjct: 417 RAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Streptococcus mutans [TaxId: 1309]}
Length = 474
Score = 347 bits (890), Expect = e-115
Identities = 148/483 (30%), Positives = 237/483 (49%), Gaps = 19/483 (3%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+ Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 5 KNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA 64
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEAR-----RTYG 145
L + L +K+ + I+++E K ++ EVV +++ +EE G
Sbjct: 65 AYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG 124
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG KP ++
Sbjct: 125 GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS 184
Query: 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
L LA EA +P GV N +T + +G + V I+FTGST +G+
Sbjct: 185 GLLLAEAFAEAGLPAGVFNTITGR---GSEIGDYIVEHQAVNFINFTGSTGIGE--RIGK 239
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
G++ + LELGG IV +A+L+ +A F GQ C A R L+ E V D+
Sbjct: 240 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 299
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
VE ++ ++ I D ++ PLI+ + V+ ++ DA KGA + +
Sbjct: 300 VEKIREKVLALTIGNP---EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
P + +T DM EE FGPV I+ + EE++ ++N S GL FTND
Sbjct: 354 -EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 412
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 413 FPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF- 471
Query: 505 NLE 507
+++
Sbjct: 472 DIK 474
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 323 bits (828), Expect = e-105
Identities = 133/481 (27%), Positives = 216/481 (44%), Gaps = 19/481 (3%)
Query: 33 YINGEWVHSSKKFPVYNP-ANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI GEWV + ++ NP A E + G + + A+ +A +AF+ W ++R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L + + K+ L + E GK E+ +V A F+++++ A R V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 152 VKSKELLMVREPL-GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210
E G +I PWNFP+A+ T + +A G T + KPAED + +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS------H 264
+ HEA P GV+N + VG L P + I+FTGS +VG +Y
Sbjct: 221 EIFHEAGFPPGVVNFLPGV---GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAP 277
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
KR +E GG IV A+ A G + + + GQ C AA+R ++ + ++
Sbjct: 278 GQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEP 337
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
+E ++ + G +N +LGP+++ Q KV S ++ ++G V+ GGK
Sbjct: 338 VLER-VLKRAERLSVGPAEEN--PDLGPVVSAEQERKVLSYIEIGKNEGQLVL--GGKRL 392
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
+ F APT+ T + P EE+FGPV I+ K E+L VAN++ GL G ++
Sbjct: 393 EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSR 452
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHT--EAAFGGVKESGLGRE-GSRHGMEEFTQIKYM 501
++ VG + N I FGG K SG + G+ + F ++K +
Sbjct: 453 KREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
Query: 502 C 502
Sbjct: 513 A 513
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon
Thermoproteus tenax [TaxId: 2271]}
Length = 499
Score = 296 bits (757), Expect = 3e-95
Identities = 131/479 (27%), Positives = 220/479 (45%), Gaps = 14/479 (2%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKER 89
+Y+ GEW S ++ V +P + +A V E+V+ + + ER
Sbjct: 18 PSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTER 77
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR----TYG 145
VL++ +E N AE++ +GKP + ++GEV A + + ++
Sbjct: 78 LAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIP 137
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205
E L+ REPLGVV ITP+N+P+ K+ + G V+KP+ PL
Sbjct: 138 GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 197
Query: 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
A A +A + G + + + VA +SFTGST+VG+ +
Sbjct: 198 AAM----AVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG 253
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
G+K+ +ELGG P IV +A+L A + GQ C A L + V+ +
Sbjct: 254 --GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL 311
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
VE + + S GD + ++GPLI+ + V+++ + ++DA+ KG +V+ GG ++
Sbjct: 312 VEEVA-KRLSSLRVGDPR-DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP 369
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ + DM+ Y EVF PVA ++ K ++++ +AN GL F D
Sbjct: 370 TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRD 429
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHT-EAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+ + R + L+VG + IN+ FGG K+SG+ REG + +E T K + F
Sbjct: 430 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 488
>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 446
Score = 285 bits (730), Expect = 5e-92
Identities = 105/442 (23%), Positives = 185/442 (41%), Gaps = 22/442 (4%)
Query: 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGE 125
+ + A+EAF + + R L+ + + N ++++ + + GK S E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 126 VVYANSFVDWFSEEARRTYGE---LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR 182
V + +D +E + + +L + EPLGVV +I WN+P + +
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCT 242
+ A+AAG ++KP+E + A N+ + +LL
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADL----LATLIPQYMDQNLYLVVKGGVPETTELLK- 176
Query: 243 SPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKF 302
I +TGST VGKI+ + ++ + ++LELGG +P V + +L A KF
Sbjct: 177 -ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 303 RNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362
N GQ CVA + L + +Q VE LK + + + + G +IN ++V
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGE---DAKQSRDYGRIINDRHFQRV 292
Query: 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422
++ + + + APTIL ++ P EE+FGPV + ++
Sbjct: 293 KGLIDNQKVAHGGTWDQSSR-------YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRS 345
Query: 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKE 480
EE++ N LA Y F+N+ ++ + G V N+ I+ + FGGV
Sbjct: 346 LEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGN 405
Query: 481 SGLGREGSRHGMEEFTQIKYMC 502
SG+G + E F+ +
Sbjct: 406 SGMGAYHGKKSFETFSHRRSCL 427
>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Vibrio harveyi [TaxId: 669]}
Length = 504
Score = 186 bits (472), Expect = 1e-53
Identities = 81/484 (16%), Positives = 156/484 (32%), Gaps = 40/484 (8%)
Query: 41 SSKKFPVYNPANDEHLAD-VPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKE 99
+ F N E L P +V A +A + + + +R +L+ E
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60
Query: 100 LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP--------SP 151
LE + E+ P GE+ + + F++ +P
Sbjct: 61 LEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAP 120
Query: 152 VKSKELLMVREPLGVVGLITPWNFPM--AMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+ ++ + LG V + NFP+ + A ALAAGC ++K P T+ +
Sbjct: 121 LPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 180
Query: 210 AALAHEAQI-PKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
A +A + + T + N ++G+ L + P + + FTGS G+ L++ +
Sbjct: 181 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240
Query: 269 IKRLSL--ELGGNAPFIVYSNANLQKA--VSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
+ + ELG P ++ +A KA +A+ CGQ C Q
Sbjct: 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQ 300
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
+ + L P I + +V S D + + +
Sbjct: 301 AFIETAQSLIRQQSP-------STLLTPGIRDSYQSQVVSRGSDDG-----IDVTFSQAE 348
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
+ + EE+FGP ++ + + + L ++ L
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHAT 408
Query: 445 --DISQAWRVGKKLQ--VGMVGIN-------EGIISHTEAAFGGVKESGLGREGSRHGME 493
D Q ++ +L+ G + N G + S +
Sbjct: 409 EEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIH 467
Query: 494 EFTQ 497
+ +
Sbjct: 468 RWLR 471
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 159 bits (402), Expect = 2e-44
Identities = 57/457 (12%), Positives = 125/457 (27%), Gaps = 64/457 (14%)
Query: 65 EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124
+++ +EA++ T +E+ +K+ ++L+ ++ + E + K +
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 125 E------------VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITP 172
E + + + + +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPI-GII 119
Query: 173 WNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTN 232
+ + AL +G T +++ D + A+ + EA + N
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292
+ L+ + + G L S LE G I + K
Sbjct: 180 TD--RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLK 237
Query: 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352
+ C AA + L+ E++ +F+ ++ E+ K
Sbjct: 238 KAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRK----------------- 280
Query: 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFG 412
G ++ P ++ D E
Sbjct: 281 -------------------------HGVEVRGCEKTREIVPDVVPATEDDW---PTEYLD 312
Query: 413 PVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTE 472
+ K +E++ +TG + T + S A + ++ V +N
Sbjct: 313 LIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDG 372
Query: 473 AAFGGVKESGLGREGS----RHGMEEFTQIKYMCFGN 505
FG E G+ + G+ E T K++ G
Sbjct: 373 GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 436
Score = 87.2 bits (215), Expect = 4e-19
Identities = 63/459 (13%), Positives = 130/459 (28%), Gaps = 68/459 (14%)
Query: 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMT------QESGKPPTE----SL 123
A++A + + R +L + L+ N A+ E +E+G + L
Sbjct: 12 ARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDL 71
Query: 124 GEVVYANSFVDWFSEEARR---TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMI 180
+ + + A + + L V L+ + P +
Sbjct: 72 FKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIA 131
Query: 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAH----EAQIPKGVLNVVTSSRTNANSV 236
A ++ +G ++K +++ T +A + + + Q GV V
Sbjct: 132 -NITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDV 190
Query: 237 GKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296
LL ++ + GS + + + + G + +A+L KA
Sbjct: 191 SDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLDEDADLIKAKRI 247
Query: 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINL 356
++ AK + ++
Sbjct: 248 SLDAKTNYPAGCNAMETLLINP---------------------------KFSKWWEVLEN 280
Query: 357 AQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAV 416
+E +I K A K+ +LG A T + + +E
Sbjct: 281 LTLEGGVTIHATKDLKTA----YFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLA 336
Query: 417 CIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFG 476
+ E ++ N ++ T + + A + K + V N + T A G
Sbjct: 337 AKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN----ASTRFADG 392
Query: 477 GVKESGLGRE-----GSRH-----GMEEFTQIKYMCFGN 505
G G E H G++ +Y G+
Sbjct: 393 F--RYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory
protein PrpR {Escherichia coli [TaxId: 562]}
Length = 186
Score = 30.1 bits (68), Expect = 0.37
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 360 EKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTIL 396
E + + + G + ++G G +T L + I
Sbjct: 129 EDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIF 165
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 29.4 bits (65), Expect = 0.55
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM +V+ A K+AF+ WS TP
Sbjct: 24 PDMTHSEVEKAF---KKAFKVWSDVTP 47
>d1i76a_ d.92.1.11 (A:) Neutrophil collagenase (MMP-8) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 163
Score = 29.0 bits (64), Expect = 0.93
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
P + +V+ AI K+AFE WS +P
Sbjct: 23 PQLSEAEVERAI---KDAFELWSVASP 46
>d1mmqa_ d.92.1.11 (A:) Matrilysin (MMP-7) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 28.7 bits (63), Expect = 0.95
Identities = 5/31 (16%), Positives = 11/31 (35%), Gaps = 3/31 (9%)
Query: 56 LADVPDMGVEDVQYAIMSAKEAFEQWSQTTP 86
++ D+ V + +A W + P
Sbjct: 20 VSYTRDLPHITVDRLV---SKALNMWGKEIP 47
>d1y93a1 d.92.1.11 (A:106-263) Macrophage elastase (MMP-12) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 158
Score = 28.4 bits (62), Expect = 1.3
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PDM EDV YAI ++AF+ WS TP
Sbjct: 18 PDMNREDVDYAI---RKAFQVWSNVTP 41
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 157
Score = 27.9 bits (61), Expect = 1.8
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PD+ DV +AI ++AF+ WS TP
Sbjct: 17 PDLPRADVDHAI---EKAFQLWSNVTP 40
>d1l1la_ c.7.1.4 (A:) B12-dependent (class II) ribonucleotide
reductase {Lactobacillus leichmannii [TaxId: 28039]}
Length = 721
Score = 28.7 bits (63), Expect = 1.8
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 114 ESGKPPTESLGEVVYANSFVDWFSEEARR-TYGELV 148
S KP LG V Y ++ W E+ R + E V
Sbjct: 14 ASVKPHWGKLGWVTYKRTYARWLPEKGRSENWDETV 49
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId:
9606]}
Length = 161
Score = 28.0 bits (61), Expect = 2.1
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PD+ E V A AF+ WS TP
Sbjct: 19 PDLDPETVDDAF---ARAFQVWSDVTP 42
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo
sapiens), fibroblast [TaxId: 9606]}
Length = 168
Score = 27.6 bits (60), Expect = 2.5
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Query: 60 PDMGVEDVQYAIMSAKEAFEQWSQTTP 86
PD+ + V A+ ++A + W + TP
Sbjct: 24 PDLPKDAVDSAV---EKALKVWEEVTP 47
>d2obpa1 a.4.5.71 (A:12-92) Putative DNA-binding protein ReutB4095
{Ralstonia eutropha [TaxId: 106590]}
Length = 81
Score = 26.0 bits (57), Expect = 3.7
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
PA+ + + + T +L +A AQ+P VL
Sbjct: 4 PAIVEVLLVLREAGIENGATPWSLPKIAKRAQLPMSVL 41
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP
2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 378
Score = 27.6 bits (61), Expect = 3.7
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 15/107 (14%)
Query: 352 PLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM-------- 403
P + V + + ++ + K + L GG T +G P + + +
Sbjct: 54 PYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCT--GPKSVIEVRDGLTFLDLIVI 111
Query: 404 ----LCYTEEVFGPVAVCIKFKTEEESLC-VANNSNTGLAGYFFTND 445
L P+ + F T +++ V +N+ + + F
Sbjct: 112 QIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNSNVDIHTFNQS 158
>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase,
C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Length = 255
Score = 27.2 bits (60), Expect = 3.9
Identities = 11/82 (13%), Positives = 22/82 (26%), Gaps = 11/82 (13%)
Query: 73 SAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESG-KPPTESLGEVVYANS 131
S A + W + GI L + + G + +
Sbjct: 98 SQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPLL------ 151
Query: 132 FVDWFSEEARRTYGELVPSPVK 153
++E+ Y +L P+
Sbjct: 152 ----WAEKTIAHYLKLGIDPLT 169
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.133 0.391
Gapped
Lambda K H
0.267 0.0686 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,811,791
Number of extensions: 82359
Number of successful extensions: 251
Number of sequences better than 10.0: 1
Number of HSP's gapped: 205
Number of HSP's successfully gapped: 27
Length of query: 507
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 418
Effective length of database: 1,185,626
Effective search space: 495591668
Effective search space used: 495591668
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.1 bits)