BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3133
(547 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345481436|ref|XP_001599955.2| PREDICTED: putative rRNA methyltransferase 3-like [Nasonia
vitripennis]
Length = 874
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/450 (49%), Positives = 290/450 (64%), Gaps = 64/450 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCRI + RELKTWK DVVL+DG+PNVG NW+ DAY Q LTL ALKLA+ L+ G
Sbjct: 92 DITTDKCRIDLARELKTWKADVVLNDGAPNVGKNWLIDAYQQATLTLSALKLATQFLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRSKDY L+W+FKQ+F++VH+TKPQASR ESAEIFVVCQHY+APAK+D KF
Sbjct: 152 GWFVTKVFRSKDYNPLIWVFKQMFKKVHATKPQASRNESAEIFVVCQHYLAPAKIDPKFL 211
Query: 123 DPKYAFKELGAED-GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F EL E KLN ++ +K+KALGYP + LY L V +I+ E+ LQ
Sbjct: 212 DPKHVFAELDLEPKNKLNVFNPEKQKKAKALGYPENDYTLYHRLSVKDYIKSESAIDALQ 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+E + +D
Sbjct: 272 DISE---------------------------IVID------------------------- 279
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
DE++L H TT E+ ECCKDI+VLG+KD+R LL W K+L DE ++K+ E+EK+ E ++E
Sbjct: 280 DEAILNHKKTTKEVIECCKDIKVLGKKDLRLLLNWHKILKDE-SDKKAEQEKD-SENQKE 337
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E+ + + E++E + TK+IE LK+E+ RELKRK+KKV+KERTKL +K+NL M+LKGD
Sbjct: 338 EETPKTLEEVEDEEDEQITKDIERLKEEKLRELKRKRKKVNKERTKLNQKLNLNMVLKGD 397
Query: 362 LGPT-ENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIV--PKKIKYNVEKSE 418
+GP E DD MF L QI+T DQL +T P+V A+SD + V PK ++Y +
Sbjct: 398 VGPVMEGDD--MFSLKQIQTYDQLHQVTDQSPDVVAESDSDSDSEVKKPKIVRYEKDSGH 455
Query: 419 LDDSGLYYKNPDDSDLEFESSSEDENDVEK 448
LD GLYYK+ +DS+LEF SED++ EK
Sbjct: 456 LDSKGLYYKD-EDSELEF---SEDDSASEK 481
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVA +NM SSII
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAHENMPVSSII 72
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 49/62 (79%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV +Y K+ +INVRPI+KV+EAKARKKKR R+++ KK++E +M+ ++SD EKA+ +
Sbjct: 727 LVEDYNKRVQDINVRPIKKVMEAKARKKKRALRKLETAKKRVEAVMDNAEMSDREKAKQV 786
Query: 539 RA 540
++
Sbjct: 787 KS 788
>gi|357610723|gb|EHJ67114.1| putative ribosomal RNA methyltransferase [Danaus plexippus]
Length = 847
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/450 (48%), Positives = 288/450 (64%), Gaps = 64/450 (14%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KC+ AI +E+KTWK DVVLHDG+PNVG+NW++DAY Q CLTL ALKLAS L+E
Sbjct: 91 EDITTEKCKTAIKKEIKTWKADVVLHDGAPNVGLNWIHDAYQQACLTLSALKLASHFLRE 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTKVFRSKDY +LLW+ KQ F++VH+TKPQASR ES+EIFVVCQ YIAP +D K
Sbjct: 151 GGWFVTKVFRSKDYHALLWVLKQFFKKVHATKPQASRNESSEIFVVCQGYIAPDSIDPKL 210
Query: 122 FDPKYAFKELG-AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK+ F++L + ++N L ++ +K KA GY + Y ++P+S+F++ E P LL
Sbjct: 211 LDPKHVFEDLEIVKKQQMNLLHPEKQKKPKAEGYKENDYTTYHSVPISEFLDKEDPIDLL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q +E+ II
Sbjct: 271 QGCSEI--------------------------------------------------II-- 278
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
DD+SVL HP TT EI ECCKDI+VLGRKDV+ LL W K L D K + EE E + +
Sbjct: 279 DDKSVLSHPKTTKEIIECCKDIKVLGRKDVKALLSWIKHLKDWKASQNATEETEKKDDND 338
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
+E V E DE + K EI +L+DEE+R+LKRK+K+++K+R KL EKMNLKM+LKG
Sbjct: 339 KE-VEEASGDEND----KVDNEIADLQDEEKRQLKRKRKQLNKQRQKLAEKMNLKMVLKG 393
Query: 361 DLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFA---DSDEEHIDIVPKKIKYNVEKS 417
D GP + +MF LS I+ T QL++I +P++ DSD+E + K +KY++E+S
Sbjct: 394 DDGPIL-ESHDMFSLSDIKNTQQLNMIVDQQPDIVLEKEDSDDE-LKKKAKFVKYDIEES 451
Query: 418 ELDDSGLYYKNPDDSDLEFESSSEDENDVE 447
+LD SGL+YK+ DS+LE ES S+DE + E
Sbjct: 452 KLDSSGLFYKDS-DSELEMESDSDDEKEKE 480
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKF FLQKS+VC+DLCAAPGGWMQVA QNM SS++ D +K
Sbjct: 23 GFRSRAAFKLIQLNRKFGFLQKSRVCIDLCAAPGGWMQVAHQNMPVSSVVIGVDLFPIKQ 82
Query: 249 PSTTVEIQECCKDIRVLGRKD-VRNLLKWWK---VLHD 282
+ + E DI K ++ +K WK VLHD
Sbjct: 83 VPGCISLTE---DITTEKCKTAIKKEIKTWKADVVLHD 117
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%)
Query: 482 EYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
EY+ + +IN RPI+KVVEAKARKKKR ++M++ KKK+E +ME D+S+ EKA+ +R
Sbjct: 705 EYKNRLQDINARPIKKVVEAKARKKKRMIKKMERAKKKVEAVMENADMSEREKAQQVR 762
>gi|193690534|ref|XP_001942837.1| PREDICTED: putative rRNA methyltransferase 3-like [Acyrthosiphon
pisum]
Length = 834
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/447 (48%), Positives = 291/447 (65%), Gaps = 63/447 (14%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT +C+ A+ +EL+T+K DVVL+DG+PNVG NW+YDAY Q CLTL ALKL L+E
Sbjct: 91 EDITTPQCQSALNKELQTYKADVVLNDGAPNVGQNWIYDAYTQSCLTLSALKLCCHNLRE 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRSKDY +L+W+FKQLF++VH+TKPQASR ESAEIFVVCQ+Y+ P+KLD +F
Sbjct: 151 GGWFITKVFRSKDYNALMWVFKQLFRKVHATKPQASRSESAEIFVVCQYYLKPSKLDMRF 210
Query: 122 FDPKYAFKELGAEDG-KLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
F+P Y FK+L KL++ K Q +K KA GYP + +L+K LPVS +++ + P + L
Sbjct: 211 FNPSYVFKDLEVNPRVKLDSESKTQ-KKPKAEGYPDNATILFKQLPVSTYMQCKNPAIAL 269
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q A E I
Sbjct: 270 QDAYE----------------------------------------------------IVL 277
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
DD + HPSTT EI+ECCKDI+VLGRKD+R+++ WWKV D KEE E GE +
Sbjct: 278 DDPIIANHPSTTDEIKECCKDIKVLGRKDIRSIMNWWKVFQD------KEENVESGEA-D 330
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
E K + E+ E+E+EL KEI+EL+DEERRELKRKKKK +KERTKL +MNLKM+ K
Sbjct: 331 ENKENDVELSEDERELDDVDKEIKELQDEERRELKRKKKKTNKERTKLHTQMNLKMVHKD 390
Query: 361 DLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVEKSELD 420
DLGPTE + +F+LS I+T LD + +P++ DS++ ++I+PKK KY+ K+ LD
Sbjct: 391 DLGPTEERETGVFQLSNIKTKKALDTVIDQEPDII-DSEDSDVEILPKKAKYDPNKTYLD 449
Query: 421 DSGLYYKNPDDSDLEFESSSEDENDVE 447
SG++Y++ D+S E +SS E ++D E
Sbjct: 450 KSGMFYRS-DESASEQDSSDEVDSDTE 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 47/50 (94%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G+RSRAAFKL+QLNRKFEFLQK++V +DLCAAPGGWMQVAKQNM SSI+
Sbjct: 23 GFRSRAAFKLLQLNRKFEFLQKARVLIDLCAAPGGWMQVAKQNMPVSSIV 72
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 49/61 (80%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV E+ K+ +IN+RPI+KV EAKARKKKR R+M+K KKKLE ++E DV++AEKAR +
Sbjct: 697 LVEEFGKRHEDINIRPIKKVGEAKARKKKRALRQMEKAKKKLEGVVENSDVTEAEKARQV 756
Query: 539 R 539
R
Sbjct: 757 R 757
>gi|383850870|ref|XP_003700997.1| PREDICTED: putative rRNA methyltransferase 3-like [Megachile
rotundata]
Length = 831
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 219/431 (50%), Positives = 266/431 (61%), Gaps = 57/431 (13%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR+AI+RELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 90 VEDITTDKCRVAISRELKTWKADVVLHDGAPNVGKNWLHDAYQQVSLTLSALKMATYFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTK+FRSKDY LLW+ +QLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 150 PGGWFVTKMFRSKDYQPLLWVLQQLFRKVHATKPQASRLESAEIFVVCQYYIAPDKLDPK 209
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN L Q K KA GYP + LY L V F+ HE
Sbjct: 210 FLDPKYVFSELDIEPTNKLNVLNPVQ-RKHKAEGYPENDYTLYHTLSVKDFVAHENAVEA 268
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ S+I+
Sbjct: 269 LQ---------------------------------------------------TVSAIV- 276
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG-GEG 298
FDDE + H TT EI+ECCKDI+VLG+KD+R LLKWWK + + E+E EKE
Sbjct: 277 FDDEKITNHELTTNEIKECCKDIKVLGKKDLRRLLKWWKSIKEALEEEESPAEKEADATT 336
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E E + + E+ E + TK+I EL+ E RELKRKKKKV+KER KL ++NLKM+
Sbjct: 337 ETTEAPPLTQEELEDMEDEEITKQIGELRAETERELKRKKKKVNKERQKLNMRLNLKMVH 396
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHID-IVPKKIKYNVEKS 417
KG+ GP D EMF L QI+T +QL+ + P+V A+SD E D I PKKIKYN E+
Sbjct: 397 KGNEGPIMEGD-EMFTLKQIKTHEQLESVIDQHPDVVAESDVESDDQIKPKKIKYNKEEG 455
Query: 418 ELDDSGLYYKN 428
+LD SGLYYK
Sbjct: 456 QLDSSGLYYKT 466
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVA+QNM SSI+ D +K
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNMPVSSIVVGVDLFPIKP 82
Query: 249 -PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P +++ D R + LK WK VLHD
Sbjct: 83 IPGCISLVEDITTD---KCRVAISRELKTWKADVVLHD 117
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 53/62 (85%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV+EY+K+ ++NVRPI+KV+EAKARKKKR R+++K KKK+E +ME+ ++++ EKA+ +
Sbjct: 689 LVDEYKKRVEDLNVRPIKKVLEAKARKKKRAVRKLEKAKKKMEQIMESAEMNEREKAKQL 748
Query: 539 RA 540
+A
Sbjct: 749 QA 750
>gi|307199137|gb|EFN79847.1| Putative rRNA methyltransferase 3 [Harpegnathos saltator]
Length = 853
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 211/436 (48%), Positives = 268/436 (61%), Gaps = 62/436 (14%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITTDKCRIAITRELKTWK DVVL+DG+PNVG NW++DAY Q LTL A+KLA+ L+
Sbjct: 91 EDITTDKCRIAITRELKTWKADVVLNDGAPNVGKNWLHDAYQQAVLTLAAIKLAAQFLRA 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTK+FRSKDY L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD+KF
Sbjct: 151 GGWFVTKIFRSKDYHPLIWVLKQLFKKVHATKPQASRNESAEIFVVCQYYIAPDKLDSKF 210
Query: 122 FDPKYAFKELGAEDG-KLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
FDPKY F EL + K+N ++ +K K GYP + LY L +FI
Sbjct: 211 FDPKYVFSELEVKSANKINIFHPERQKKPKVEGYPENDYTLYHKLSAKEFI--------- 261
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
C D A + +S I
Sbjct: 262 --------------------------------ACEDAVEA-----------LQTASEIVI 278
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
DDE+V KH TT EI+E CKDI+VLGRKD++ LLKWWK L E E +K++E+ G E+
Sbjct: 279 DDEAVDKHEKTTKEIREACKDIKVLGRKDLKMLLKWWKTLK-EAHESDKKKEENGTALED 337
Query: 301 EEKVVEDEMDEEEKELMKAT---KEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E + EE+E ++ K+I E+KD E RELKRKKKKV KER KL E++NLKM+
Sbjct: 338 ETAAAPAAISVEEQEDLEDAEIEKQIAEIKDTEARELKRKKKKVHKERQKLNERLNLKMV 397
Query: 358 LKGDLGP-TENDDEEMFKLSQIRTTDQLDLITASKPEVFA--DSDEEHIDIVPKKIKYNV 414
KGD GP E DD MF L+QI+T QL+ +T P+V A + + + ++ PK ++Y
Sbjct: 398 HKGDEGPKLEGDD--MFHLNQIQTYQQLEQVTDQTPDVVAESEEESDDEEVRPKTVRYEK 455
Query: 415 EKSELDDSGLYYKNPD 430
+ LD GLYYK+ D
Sbjct: 456 DAGHLDSKGLYYKSED 471
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 48/50 (96%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRAAFKLIQLNRK+EFLQKS+VC+DLCAAPGGWMQVA+QNM SSI+
Sbjct: 23 GYRSRAAFKLIQLNRKYEFLQKSRVCIDLCAAPGGWMQVARQNMPVSSIV 72
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 51/62 (82%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LVN+Y+K+ ++NVRPI+KV+EAKARKKKR R+++K KKK+E LM+ D+SD EKAR +
Sbjct: 708 LVNDYKKRVEDLNVRPIKKVMEAKARKKKRAIRKLEKAKKKVEALMDNTDISDREKARQV 767
Query: 539 RA 540
A
Sbjct: 768 AA 769
>gi|332025804|gb|EGI65961.1| Putative rRNA methyltransferase 3 [Acromyrmex echinatior]
Length = 836
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 214/472 (45%), Positives = 278/472 (58%), Gaps = 83/472 (17%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDI TDKCR+AI+RELKTWK DVVL+DG+PNVG +W++DAY Q LTL ALKLA+ LK
Sbjct: 90 VEDIMTDKCRVAISRELKTWKADVVLNDGAPNVGKSWLHDAYQQVVLTLSALKLATQFLK 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 150 AGGWFVTKVFRSKDYNPLIWVLKQLFKKVHATKPQASRNESAEIFVVCQYYIAPDKLDPK 209
Query: 121 FFDPKYAFKELGAED-GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
FFDPK+ F EL E KLN L ++ +KSKA GY + LY + +FI
Sbjct: 210 FFDPKHVFSELQIETINKLNILYPEKQKKSKAEGYRENDYTLYHKISAKEFI-------- 261
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
C D AA + +S I
Sbjct: 262 ---------------------------------ACEDAIAA-----------LQNASEIV 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DDE + KH TT EI+ECCKDI+VLGRKD++ LL WWK L +T E
Sbjct: 278 IDDEIIDKHEKTTKEIRECCKDIKVLGRKDLKLLLSWWKALKKTQT-----------ETN 326
Query: 300 EEEKVVEDEM----------DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
E+ V++DE+ ++E+ E K+I +L++ E RELKRK+KK +K+R KL
Sbjct: 327 GEKNVIKDEITVTPATTSLEEQEDLEDEAIQKQIADLREAEARELKRKRKKANKDRQKLN 386
Query: 350 EKMNLKMLLKGDLGPT-ENDDEEMFKLSQIRTTDQLDLITASKPEVFA---DSDEEHIDI 405
E++NLKM+ K D GP E DD +F L+QI+T QL+ +T P++ A DSDEE +
Sbjct: 387 ERLNLKMIHKSDEGPKLERDD--LFNLNQIQTYQQLEQVTDQMPDILASDVDSDEE---V 441
Query: 406 VPKKIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDT 457
PK I Y + + LD GLYYK+ D + + ++S ++ L E E DT
Sbjct: 442 KPKTIYYEKDTNHLDSKGLYYKSEDSEESDTDASDDESEKSGLGLDESEDDT 493
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/50 (86%), Positives = 47/50 (94%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRAAFKLIQLNRKFEF QKS+VC+DLCAAPGGWMQVA+QNM SSI+
Sbjct: 23 GYRSRAAFKLIQLNRKFEFFQKSRVCIDLCAAPGGWMQVARQNMSISSIV 72
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L ++Y+K+ ++NVRPI+KV+EAKARKKKR R+++K KKK+E LM+ D+SD EKAR +
Sbjct: 690 LADDYKKRVEDLNVRPIKKVMEAKARKKKRAIRKLEKAKKKIEALMDNVDISDREKARQV 749
Query: 539 RA 540
+A
Sbjct: 750 KA 751
>gi|328784537|ref|XP_003250462.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Apis
mellifera]
Length = 844
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/436 (48%), Positives = 264/436 (60%), Gaps = 68/436 (15%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR++ITRELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 90 IEDITTDKCRVSITRELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLSALKMATHFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 150 SGGWFITKVFRSKDYHPLIWVLKQLFKKVHATKPQASRTESAEIFVVCQYYIAPDKLDPK 209
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K K GYP + LY L V FI HE
Sbjct: 210 FLDPKYVFSELEIEPTNKLNIFNPTK-KKDKVEGYPENDYTLYHKLSVKDFIAHENVVEA 268
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ+ +S I
Sbjct: 269 LQN----------------------------------------------------TSEIV 276
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
FDDE + H TT EI+ECCKDI+VLG+KD+RNL+ WWK++ +++ KEKE E +
Sbjct: 277 FDDEIITNHEKTTKEIKECCKDIKVLGKKDLRNLINWWKII--KESLKEKEPIDENTQNL 334
Query: 300 EEEKVVEDEMDEEEKELM---KATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+E V M +EE E + + K+IEELK+ E R+LKRKKKK +K+R KL E++NLKM
Sbjct: 335 LDETVETAPMSQEELEDIEDEQIRKQIEELKENEARDLKRKKKKANKQRQKLNERLNLKM 394
Query: 357 LLKGDLGPT-ENDDEEMFKLSQIRTTDQLDLITASKPEVFA----DSDEEHIDIVPKKIK 411
+ KG+ GP E DD MF L +I+T QL+ I P + A DSD E K+I
Sbjct: 395 IHKGNEGPILEGDD--MFSLKEIKTHQQLENIMDQDPNILAESDIDSDTEQKKT--KRII 450
Query: 412 YNVEKSELDDSGLYYK 427
Y +K LD SGLYYK
Sbjct: 451 YKKDKGHLDSSGLYYK 466
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI-IHFDDESVLK 247
GYRSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVA+QNM SSI I D +
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNMPVSSIVIGVDLFPIKP 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P I++ D R + LK WK VLHD
Sbjct: 83 IPGCISLIEDITTD---KCRVSITRELKTWKADVVLHD 117
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 52/62 (83%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LVNEY+K+ ++N+RPI+KV+EAKARKK+R R+++K KKK+E++M+ D+S+ EKA+ I
Sbjct: 701 LVNEYKKRVEDLNIRPIKKVIEAKARKKRRALRKLEKAKKKVESIMDNTDISNKEKAKQI 760
Query: 539 RA 540
+
Sbjct: 761 QT 762
>gi|110760837|ref|XP_391900.3| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Apis
mellifera]
Length = 817
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 212/436 (48%), Positives = 264/436 (60%), Gaps = 68/436 (15%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR++ITRELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 90 IEDITTDKCRVSITRELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLSALKMATHFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 150 SGGWFITKVFRSKDYHPLIWVLKQLFKKVHATKPQASRTESAEIFVVCQYYIAPDKLDPK 209
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K K GYP + LY L V FI HE
Sbjct: 210 FLDPKYVFSELEIEPTNKLNIFNPTK-KKDKVEGYPENDYTLYHKLSVKDFIAHENVVEA 268
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ+ +S I
Sbjct: 269 LQN----------------------------------------------------TSEIV 276
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
FDDE + H TT EI+ECCKDI+VLG+KD+RNL+ WWK++ +++ KEKE E +
Sbjct: 277 FDDEIITNHEKTTKEIKECCKDIKVLGKKDLRNLINWWKII--KESLKEKEPIDENTQNL 334
Query: 300 EEEKVVEDEMDEEEKELM---KATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+E V M +EE E + + K+IEELK+ E R+LKRKKKK +K+R KL E++NLKM
Sbjct: 335 LDETVETAPMSQEELEDIEDEQIRKQIEELKENEARDLKRKKKKANKQRQKLNERLNLKM 394
Query: 357 LLKGDLGPT-ENDDEEMFKLSQIRTTDQLDLITASKPEVFA----DSDEEHIDIVPKKIK 411
+ KG+ GP E DD MF L +I+T QL+ I P + A DSD E K+I
Sbjct: 395 IHKGNEGPILEGDD--MFSLKEIKTHQQLENIMDQDPNILAESDIDSDTEQKKT--KRII 450
Query: 412 YNVEKSELDDSGLYYK 427
Y +K LD SGLYYK
Sbjct: 451 YKKDKGHLDSSGLYYK 466
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI-IHFDDESVLK 247
GYRSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVA+QNM SSI I D +
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNMPVSSIVIGVDLFPIKP 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P I++ D R + LK WK VLHD
Sbjct: 83 IPGCISLIEDITTD---KCRVSITRELKTWKADVVLHD 117
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 52/62 (83%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LVNEY+K+ ++N+RPI+KV+EAKARKK+R R+++K KKK+E++M+ D+S+ EKA+ I
Sbjct: 674 LVNEYKKRVEDLNIRPIKKVIEAKARKKRRALRKLEKAKKKVESIMDNTDISNKEKAKQI 733
Query: 539 RA 540
+
Sbjct: 734 QT 735
>gi|380029605|ref|XP_003698459.1| PREDICTED: LOW QUALITY PROTEIN: putative rRNA methyltransferase
3-like [Apis florea]
Length = 853
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/435 (48%), Positives = 267/435 (61%), Gaps = 66/435 (15%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCRI+I RELKTWK DVVLHDG+PNVG NW++DAY Q LTLGALK+A+ L+
Sbjct: 90 IEDITTDKCRISIARELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLGALKMATHFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 150 SGGWFITKVFRSKDYNPLIWVLKQLFKKVHATKPQASRTESAEIFVVCQYYIAPDKLDPK 209
Query: 121 FFDPKYAFKELGAED-GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K KA GYP + LY L V FI HE
Sbjct: 210 FLDPKYVFSELEIEPINKLNIFNPTK-KKDKAEGYPENDYTLYHKLSVKDFIAHENVVEA 268
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ+ +S I
Sbjct: 269 LQN----------------------------------------------------TSEIV 276
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
FDDE + H TT EI+ECCKDI+VLG+KD+RNL+ WWK++ +++ KEKE E +
Sbjct: 277 FDDEIITNHEKTTKEIKECCKDIKVLGKKDLRNLINWWKII--KESLKEKEPIDENTQNL 334
Query: 300 EEEKVVEDEMDEEEKELM---KATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+E + M +EE E + + K+IEELK+ E R+LKRKKKK +K+R KL E++NLKM
Sbjct: 335 LDETIETAPMSQEELEDIEDEQIRKQIEELKENEARDLKRKKKKANKQRQKLNERLNLKM 394
Query: 357 LLKGDLGPT-ENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDI---VPKKIKY 412
+ KG+ GP E DD MF L +I+T QL+ I P + A+SD + D+ KKI Y
Sbjct: 395 IHKGNEGPILEGDD--MFSLKEIKTHQQLENIMDQDPNILAESDVDS-DVEQKKSKKIIY 451
Query: 413 NVEKSELDDSGLYYK 427
+K LD SGLYYK
Sbjct: 452 KKDKGHLDSSGLYYK 466
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI-IHFDDESVLK 247
GYRSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVA+QNM SSI I D +
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNMPVSSIVIGVDLFPIKP 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P I++ D R + LK WK VLHD
Sbjct: 83 IPGCISLIEDITTD---KCRISIARELKTWKADVVLHD 117
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 52/62 (83%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LVNEY+K+ ++N+RPI+KV+EAKARKK+R R+++K KKK+E++M+ D+S+ EKA+ I
Sbjct: 707 LVNEYKKRIEDLNIRPIKKVIEAKARKKRRALRKLEKAKKKVESIMDNTDISNKEKAKQI 766
Query: 539 RA 540
+
Sbjct: 767 QT 768
>gi|307176560|gb|EFN66047.1| Putative rRNA methyltransferase 3 [Camponotus floridanus]
Length = 844
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 225/481 (46%), Positives = 284/481 (59%), Gaps = 84/481 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITTDKCR+AI+RELKTWK DVVL+DG+PNVG NW++DAY Q LTL A+KLA+ L+
Sbjct: 91 EDITTDKCRVAISRELKTWKADVVLNDGAPNVGKNWLHDAYQQVVLTLSAVKLATQFLRA 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTKVFRSKDY +L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD KF
Sbjct: 151 GGWFVTKVFRSKDYHALIWVLKQLFKKVHATKPQASRNESAEIFVVCQYYIAPDKLDPKF 210
Query: 122 FDPKYAFKELGAED-GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
FD KY F EL E K N L+ + +K+KA GYP++ LY L +FI E
Sbjct: 211 FDAKYVFSELEIESTNKSNFLQPDKQKKNKAEGYPTNDYTLYHKLSAKEFIACENAV--- 267
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
EFLQ AS I+
Sbjct: 268 -------------------------EFLQN-----------------------ASEIV-I 278
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
DDE + H TT E++ECCKDI+VLGRKD++ LL WWK L ++ E +E
Sbjct: 279 DDEFINNHEKTTKEVRECCKDIKVLGRKDLKLLLNWWKSL-----------KQAQAETKE 327
Query: 301 EEKVVEDEMD--------EEEKELMKAT--KEIEELKDEERRELKRKKKKVSKERTKLQE 350
+E VVEDE EE+++L A K+I EL++ E +ELKRKKKK KER KL E
Sbjct: 328 KEDVVEDETTTASKTISLEEQEDLEDAVIEKQIVELREAEAKELKRKKKKSLKERNKLNE 387
Query: 351 KMNLKMLLKGDLGP-TENDDEEMFKLSQIRTTDQLDLITASKPEVF----ADSDEEHIDI 405
++NLKM+ K D GP E DD MF+LSQI+T QL +T P+V ADSDEE I
Sbjct: 388 RLNLKMIHKNDEGPKLEGDD--MFQLSQIQTYQQLQQVTDQTPDVLAESEADSDEE---I 442
Query: 406 VPKKIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDTDEEDGLGK 465
P + Y + LD GLYYK+ D + + ++ S+D+ D EK + E DE K
Sbjct: 443 KPTTVSYKKDTGHLDSKGLYYKSEDSDENDTDAISDDDTDSEKSGLGLEDSEDESTNRAK 502
Query: 466 L 466
+
Sbjct: 503 V 503
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 48/50 (96%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVA+QNM SSI+
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNMPVSSIV 72
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV EY+ K ++NVRPI+KV+EAKARKK+R R+++K KKK+E LM+ DV+D EKAR I
Sbjct: 701 LVEEYQNKVKDLNVRPIKKVMEAKARKKRRTMRKLEKAKKKMEVLMDNADVNDKEKARQI 760
Query: 539 RA 540
+A
Sbjct: 761 KA 762
>gi|321474059|gb|EFX85025.1| hypothetical protein DAPPUDRAFT_300798 [Daphnia pulex]
Length = 861
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 272/479 (56%), Gaps = 69/479 (14%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KC ++ +EL TWK DVVLHDG+PNVG NW+YDA+ Q L L ALKLA+ L +
Sbjct: 88 EDITTEKCYQSLKKELTTWKADVVLHDGAPNVGQNWIYDAFIQNQLVLSALKLATEFLVK 147
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTK+FRSKDY SL+W+ +QLF+RVHSTKP ASR ESAEIFV+CQ Y AP KLD KF
Sbjct: 148 GGWFVTKIFRSKDYNSLMWVLRQLFKRVHSTKPHASRMESAEIFVICQGYRAPDKLDPKF 207
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F+E+ + L+ + K KA GY + L+K+ +S F+ E +L
Sbjct: 208 LDPKHVFQEVENISNTVMGLQAHEKSKPKAGGYEEGITSLHKSAQISDFVHKENFVDILN 267
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+AT +++ +
Sbjct: 268 NAT----------------------------------------------------VLNMN 275
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLH---DEKTEKEKEEEKEGGEG 298
D + HP TT+EI+ECCKDI+VLGRKD++ LL W K + D+K E+ K E E
Sbjct: 276 DPEIANHPLTTIEIKECCKDIKVLGRKDLKALLGWRKAIQKSLDDKAEQLKLE--ENASI 333
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E+ + ED ++E++L + ++I+EL+D + ++ KRKKKK+ ER KLQEKM LKM++
Sbjct: 334 EKPVPMEEDACSDDEEDLSQVERQIKELEDAKVQDAKRKKKKLMNERRKLQEKMRLKMVI 393
Query: 359 KGDLGPTENDDEEMFKLSQIRT-----------TDQLDLITASKPEVFADSDEEHIDIVP 407
GD GP+ + + +F L QI+T +L+ I + + A+ E P
Sbjct: 394 PGDGGPSVLEAKPLFALDQIKTDQACIFNRFNNQTELNQIADQEADELAEEPREKPAPFP 453
Query: 408 KKIKYNVEKSELDDSGLYYKNPD-DSDLEFESSSEDENDVEKKLVEEEFDTDEEDGLGK 465
KK KY+ E +LD G Y + D D +L F+S E E+DV + + + TDE DG K
Sbjct: 454 KKAKYDKETFQLDSKGRYRREEDSDEELIFDSDDEYESDVPQDSLGLDNATDESDGESK 512
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLNRKFEFL+KS+V +DLCAAPG WMQVAKQ+M SS+I D +K
Sbjct: 20 GYRSRAAFKLLQLNRKFEFLEKSRVVIDLCAAPGSWMQVAKQHMPVSSLIIGIDLFPMKP 79
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ +QE + + ++ L WK VLHD
Sbjct: 80 IQGCLTLQEDITTEKCY--QSLKKELTTWKADVVLHD 114
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 47/61 (77%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V +Y+ K EINVRPI+KVVEAKARKK+R RRM+K +KK +T+ E +SD +KA+ I
Sbjct: 733 VVQQYKDKMKEINVRPIKKVVEAKARKKRRTMRRMEKARKKADTISETMGMSDYDKAQQI 792
Query: 539 R 539
R
Sbjct: 793 R 793
>gi|242010550|ref|XP_002426028.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
gi|212510038|gb|EEB13290.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
Length = 839
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 258/431 (59%), Gaps = 58/431 (13%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT KC+ ++T+ L+TWK DVVLHDG+PNVG NW++DAY Q CLTL ALKL + L+
Sbjct: 90 VEDITTSKCKSSLTKALQTWKADVVLHDGAPNVGTNWIHDAYQQVCLTLSALKLGTEFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
EGGWF+TKVFRS DY SLLW+FKQLF++V +TKPQASR ESAEIFV C+H+ AP K+D K
Sbjct: 150 EGGWFITKVFRSSDYNSLLWVFKQLFKKVQATKPQASRSESAEIFVACKHFFAPDKIDPK 209
Query: 121 FFDPKYAFKELGAED-GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
FF P+Y FKEL + LN ++ +K+K GY L+ + V++F++ E +
Sbjct: 210 FFQPQYVFKELDLKSPATLNIFNPRKQKKAKPEGYEEGDYTLHHTINVTEFLKSENAIEV 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ A+ +I+
Sbjct: 270 LQRAS---------------------------------------------------TIVF 278
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
D+ ++L HP TT E+ EC KDI+VL RKDVR +L WWK L +E K +E +E E
Sbjct: 279 DDE-TILNHPKTTKELVECFKDIKVLNRKDVRLILTWWKALREEAKLKYMKEMEEKKAKE 337
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
++ + DEEEKEL + I +K EE + K+KKK KER KLQEKMNLKM+L
Sbjct: 338 KKNQPEPTLSDEEEKELNEIDAHISAVKKEELQAQKKKKKIAEKERKKLQEKMNLKMVLN 397
Query: 360 GDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHID---IVPKKIKYNVEK 416
P D++ +F+LS IR+ +LD + KPE+ +SD H D I PKKIKY+ E
Sbjct: 398 KYENPGMQDEDAIFRLSMIRSGKELDKVLDQKPEILPESD--HSDDEQIKPKKIKYSKEN 455
Query: 417 SELDDSGLYYK 427
S LD+SGLYYK
Sbjct: 456 SYLDNSGLYYK 466
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKL+QLNRKF FL+ SKV +DLCAAPGGWMQVAKQNM SS+I D +K
Sbjct: 23 GFRSRAAFKLLQLNRKFGFLESSKVLIDLCAAPGGWMQVAKQNMPVSSVIVGVDLFPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + E + + + L+ WK VLHD
Sbjct: 83 IPGCISLVEDITTSKC--KSSLTKALQTWKADVVLHD 117
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EYR K EINVRPI+K+VEAKARKK+R + + + KK+E +M+ D+SD EK RNI
Sbjct: 710 MVQEYRNKLKEINVRPIKKIVEAKARKKRRMMKSLQRANKKMEKIMDDVDISDREKVRNI 769
Query: 539 R 539
+
Sbjct: 770 Q 770
>gi|322795549|gb|EFZ18245.1| hypothetical protein SINV_12039 [Solenopsis invicta]
Length = 833
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 267/433 (61%), Gaps = 59/433 (13%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKC+ A++RELKTWK DVVL+DG+PNVG NW++DA+ Q LTL ALKLA+ L+
Sbjct: 90 VEDITTDKCKAALSRELKTWKADVVLNDGAPNVGKNWLHDAFQQSVLTLSALKLATQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP K+D K
Sbjct: 150 PGGWFITKVFRSKDYHPLIWVLKQLFEKVHATKPQASRIESAEIFVVCQYYIAPDKVDPK 209
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
FFDPK+ F EL E KLN L ++ K K GYP + LY L +F+ +
Sbjct: 210 FFDPKHVFSELQIETTNKLNILHPEK-RKLKVEGYPENDYTLYHQLSAKQFLACDDAVEA 268
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ+A+E + +D
Sbjct: 269 LQNASE---------------------------IVID----------------------- 278
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DE + KH TT EI+ECCKDI+VLGRKD++ L+ WWK L +KTE E E K E
Sbjct: 279 --DEFIDKHEKTTKEIRECCKDIKVLGRKDLKLLINWWKAL--KKTETETNEAKNTEEEI 334
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
V E +E+ ++ + K+I EL++EE +ELKRKKKK K+R KL E++NLKM+ K
Sbjct: 335 TTAPAVNLEEEEDLEDEV-IQKQIAELREEETKELKRKKKKTKKDRQKLNERLNLKMIHK 393
Query: 360 GDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHID-IVPKKIKYNVEKSE 418
D GP + + E +FKL+QI+T +QL+ IT P+V A+SD + D I PK I Y +
Sbjct: 394 RDEGP-KLEAENLFKLNQIQTYEQLEQITDQTPDVVAESDVDSDDEIKPKTIFYEKDAGH 452
Query: 419 LDDSGLYYKNPDD 431
LD GLYYK+ D+
Sbjct: 453 LDSKGLYYKSEDN 465
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 48/50 (96%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRAAFKLIQLNRKF+FLQKS+VC+DLCAAPGGWMQVA+QNM SS++
Sbjct: 23 GYRSRAAFKLIQLNRKFQFLQKSRVCIDLCAAPGGWMQVARQNMPVSSVV 72
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L +EY+K+ ++NVRPI+KV+EAKARKKKR R+++K KK+E LME D+SD EKAR
Sbjct: 689 LADEYKKRVEDLNVRPIKKVMEAKARKKKRAMRKLEKANKKVEVLMENADISDKEKARQA 748
Query: 539 RA 540
+A
Sbjct: 749 KA 750
>gi|157169535|ref|XP_001657887.1| ribosomal RNA methyltransferase [Aedes aegypti]
gi|108883667|gb|EAT47892.1| AAEL001037-PA [Aedes aegypti]
Length = 852
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/407 (45%), Positives = 253/407 (62%), Gaps = 64/407 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+DK + + +ELKTWK DVVL+DG+PNVG NW++DAY Q CLTL A+KLA+ L+ G
Sbjct: 92 DITSDKTKSDLAKELKTWKADVVLNDGAPNVGRNWLFDAYQQVCLTLSAVKLATQFLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRSKDY +L+W+ KQLF++VH+TKP ASR ESAEIFVVCQHY AP K+D +F
Sbjct: 152 GWFVTKVFRSKDYNALIWVLKQLFKKVHATKPSASRNESAEIFVVCQHYRAPDKIDPRFL 211
Query: 123 DPKYAFKELGAEDG-KLNALKK-KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D KY F+EL E K+N LK+ ++ +K K GY D + K + V++F++ E P LL
Sbjct: 212 DAKYVFEELDVEPQVKVNLLKEVEKAKKPKVEGY--DGTDVRKIITVTEFLKEEKPLGLL 269
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
TE I F
Sbjct: 270 GRVTE----------------------------------------------------IRF 277
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEK-TEKEKEEEKEGGEGE 299
DD+++ HP TT EI+ECCKDI+VLGRKD+R+LLKW K++ E ++EK EE+ G+G+
Sbjct: 278 DDKAISNHPRTTSEIKECCKDIKVLGRKDLRDLLKWHKMMSSELFPQEEKAEEETKGKGK 337
Query: 300 E----EEKVVEDEM---DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKM 352
E++ ++E DEE EL KEI EL+ EE ++ KRK+KK +KER KL EK+
Sbjct: 338 RVTKLNEQIEQEEAEGDDEETVELKSMEKEIAELRKEEEQDAKRKRKKANKERAKLNEKL 397
Query: 353 NLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
+LKM++KGD GPTE D MF L+ +R+ Q+D + + P+V + D
Sbjct: 398 SLKMVIKGDEGPTEQADAMMFSLNAVRSKKQMDDLLDADPDVLMEQD 444
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNR+F FLQ+S+VC+DLCAAPGGWMQVAKQNM SS++ D +K+
Sbjct: 23 GYRSRAAFKLIQLNRRFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVSSVVIGIDLFPIKN 82
Query: 249 -PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P + + D + D+ LK WK VL+D
Sbjct: 83 VPGCISLVGDITSD---KTKSDLAKELKTWKADVVLND 117
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 483 YRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
Y+K E+NVR I+KV+EAKARKKK +R++K+KKK ET+ME D ++ EK R
Sbjct: 715 YKKNLEEMNVRSIKKVMEAKARKKKHATKRLEKIKKKAETIMENVDNTNQEKIR 768
>gi|170042491|ref|XP_001848957.1| AdoMet-dependent rRNA methyltransferase spb1 [Culex
quinquefasciatus]
gi|167866033|gb|EDS29416.1| AdoMet-dependent rRNA methyltransferase spb1 [Culex
quinquefasciatus]
Length = 857
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/417 (45%), Positives = 258/417 (61%), Gaps = 62/417 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+DK + +T+ELKTWK DVVL+DG+PNVG NW++DAY Q CLTL A KLA+ L+ G
Sbjct: 92 DITSDKTKSDLTKELKTWKADVVLNDGAPNVGRNWLFDAYQQVCLTLSATKLATQFLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF+TKVFRSKDY +L+W+ KQLF++VH+TKP ASR ESAEIFVVCQHY AP K+D +F
Sbjct: 152 GWFITKVFRSKDYNALIWVLKQLFKKVHATKPSASRNESAEIFVVCQHYRAPDKIDPRFL 211
Query: 123 DPKYAFKELGAEDG-KLNALKK-KQVEKSKALGY-PSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL E K+N LK ++ +K+K GY +DV K + V++F+ + P L
Sbjct: 212 DAKYVFEELDIEPQVKINLLKDVEKTKKAKVEGYEGTDVR---KIISVTEFLRDDKPLAL 268
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L TE I
Sbjct: 269 LGRLTE----------------------------------------------------IR 276
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
FDD ++ KHP TT EI+ECCKDI+VLGRKD+R+LLKW K+L+ E K + EE+EG
Sbjct: 277 FDDPAIEKHPRTTAEIRECCKDIKVLGRKDLRDLLKWHKLLNGELFPKVEGEEEEGKGKS 336
Query: 300 EEEKVVEDE----MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
++V +++ DEE EL KEI LK EE ++ KRK+KK +KERTKL EK++LK
Sbjct: 337 LAQRVQQEQDGESADEETVELRNMEKEIAALKKEEEQDAKRKRKKANKERTKLNEKLSLK 396
Query: 356 MLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKY 412
M++KGD GPTE +D +F L+ +++ ++D++ + P+V A+ + D KK KY
Sbjct: 397 MVIKGDAGPTEQEDGMIFSLNTLKSRKEVDVLLDAPPDVLAEPGFDDDDGPHKKQKY 453
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D +K+
Sbjct: 23 GYRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVSSIVIGVDLYAIKN 82
Query: 249 -PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P + + D + D+ LK WK VL+D
Sbjct: 83 VPGCISLVGDITSD---KTKSDLTKELKTWKADVVLND 117
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YR +INVR ++KV+EAKARKK+ A+R+DK+KKK ET+ME D ++ EK R ++
Sbjct: 700 VASYRNNLEDINVRSLKKVMEAKARKKRHAAKRLDKIKKKAETIMENVDNTNQEKIRMLK 759
>gi|195398799|ref|XP_002058008.1| GJ15847 [Drosophila virilis]
gi|194150432|gb|EDW66116.1| GJ15847 [Drosophila virilis]
Length = 831
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 180/402 (44%), Positives = 238/402 (59%), Gaps = 58/402 (14%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WKVDVVLHDG+PNVG NW+YDAY Q CLTL ALKL + L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKVDVVLHDGAPNVGRNWLYDAYQQICLTLNALKLGTHFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP ++D +
Sbjct: 150 GGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDRIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL E + N+L + +K KA GY L +L S+F++ E
Sbjct: 210 LLDAKYVFEELDLEGKQKNSLLHPEKQKRIKAEGYTEQDIALRNDLAASEFMQAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEE-KEGGEG 298
DDE + KH TT EI ECCKD++VLGRKD++ LL WWK + E + E E +E
Sbjct: 278 IDDERIAKHKRTTSEILECCKDLKVLGRKDIKGLLLWWKHIKQELFQSEAEGVIEEPEAE 337
Query: 299 EEEEKVVEDEM-DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+ E + +D++ D E+ EL ++IE L EE++ELKRK+KK K + KL EKMNL M+
Sbjct: 338 QPAEPLTQDQIEDMEDAELQ---QQIESLATEEQKELKRKRKKTLKSKAKLHEKMNLNMV 394
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
+KGD GP E + E+F L I + +LD + +P+ D D
Sbjct: 395 IKGDDGPVEETEHEIFDLKGINSVSELDAMLDVQPDFDVDGD 436
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D ++
Sbjct: 23 GFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + + E + R+ + L+ WK VLHD
Sbjct: 83 IAGCIGLVEDITTEKC--RQSLTKELQSWKVDVVLHD 117
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARKK+R +R+ K KK E +ME D + EKA+ +
Sbjct: 696 LTEEYQRKVQELNVRPIKKVMEAKARKKRRATKRLAKAKKMAEKIMENADATSQEKAKQL 755
Query: 539 R 539
+
Sbjct: 756 K 756
>gi|195432683|ref|XP_002064346.1| GK19748 [Drosophila willistoni]
gi|194160431|gb|EDW75332.1| GK19748 [Drosophila willistoni]
Length = 824
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/410 (43%), Positives = 241/410 (58%), Gaps = 58/410 (14%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW++DAY Q CLTL ALKL + L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLFDAYQQICLTLNALKLGTQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP ++D +
Sbjct: 150 SGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDRIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL E K ++L + +K KA GY L +L ++F++ E
Sbjct: 210 LLDSKYVFEELDLEGKKKSSLLHPEKQKRIKAEGYTEQDIALRNDLAATEFMQAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE--KTEKEKEEEKEGGE 297
DDE + +H TT EI ECCKDI+VLGRKD++ LL WWK + DE KTE +EE E
Sbjct: 278 IDDERIARHKKTTTEILECCKDIKVLGRKDIKGLLLWWKAIKDEFFKTEAAEEETLVVEE 337
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+ E+ D E+ +L ++IE L DEE+++LKRK+KK K + KL EKMNL M+
Sbjct: 338 STPKPLTQEEIEDMEDADLQ---QQIETLADEEQKDLKRKRKKTLKTKAKLHEKMNLNMV 394
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVP 407
+KGD GP E + E+F L I + ++LD + +P+ + + E +P
Sbjct: 395 IKGDDGPVEEAEHEIFDLKGISSVNELDQMLDIEPDFDVEGEPEQHPKLP 444
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D ++
Sbjct: 23 GFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + + E + R+ + L+ WK VLHD
Sbjct: 83 IAGCIGLVEDITTEKC--RQSLTKELQSWKADVVLHD 117
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARKK+R +R+ K KK E +ME D + EKA+ +
Sbjct: 688 LTEEYQRKVQELNVRPIKKVMEAKARKKRRVTKRLAKAKKMAEKIMENADATSQEKAKQL 747
Query: 539 R 539
+
Sbjct: 748 K 748
>gi|347969042|ref|XP_311882.5| AGAP003002-PA [Anopheles gambiae str. PEST]
gi|333467724|gb|EAA07890.5| AGAP003002-PA [Anopheles gambiae str. PEST]
Length = 917
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 199/478 (41%), Positives = 284/478 (59%), Gaps = 66/478 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+DK + + +ELKTWKVDVVL+DG+PNVG NW++DAY Q CLTL A+KLA+ L+ G
Sbjct: 92 DITSDKTKADLAKELKTWKVDVVLNDGAPNVGKNWLHDAYQQVCLTLSAVKLATQFLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF+TKVFRSKDY +L+W+ KQLF++VH+TKP ASRKESAEIFVVCQ+Y AP K+D +F
Sbjct: 152 GWFITKVFRSKDYNALIWVLKQLFRKVHATKPSASRKESAEIFVVCQYYKAPDKIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
D KY F+EL + + S N+L K +E +TP +
Sbjct: 212 DSKYVFEELDIQSKDI-----------------SSNNIL-------KELERKTPK---KP 244
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
E GY S K+I E++Q K L +V + + D
Sbjct: 245 KVE---GYDSTDVRKIITA---LEYMQSDKPLALLS-------RVTEITFTKA------D 285
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTE---KEKEEEKEGGEGE 299
E++ HP TT E++ECCKDI++LGRKD++ LL+W K+L E TE + +++K+ GEGE
Sbjct: 286 EAIANHPRTTTELKECCKDIKILGRKDIKELLRWHKLLSPEFTEAGEDKADDKKKKGEGE 345
Query: 300 EEEKVVEDEMDEEEK---ELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+ K +DE + ++ EL + KEI L+ EE R KR +KK +KER KL EK++LKM
Sbjct: 346 DGAKDDDDEETDVDEEIVELKQIEKEIATLQKEEERSSKRMRKKTNKERAKLNEKLSLKM 405
Query: 357 LLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFAD--SDEEHIDIVPKKIKYNV 414
++KGD GPTE ++ +F L + T QL+ I P+ + SD+E + + ++Y+
Sbjct: 406 VIKGDAGPTEQGEDMVFSLKDVGTRQQLESILDQAPDFVVEDKSDDEGAED-GEYVRYDR 464
Query: 415 E-KSEL-DDSGLYYKNPDDSDLEFESSSED-----ENDVEKKLVEEEFD----TDEED 461
E K +L +D L DSD E +S ++ E+D E+ EE+ D +D+ED
Sbjct: 465 ETKGDLFEDDKLLSTQRADSDSEIDSDFDEKGLAMESDDEELSFEEDEDMKDPSDDED 522
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 4/92 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNR+F FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D +K+
Sbjct: 23 GYRSRAAFKLIQLNRRFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLYPIKN 82
Query: 249 -PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
P I + D + D+ LK WKV
Sbjct: 83 VPGCISLIGDITSD---KTKADLAKELKTWKV 111
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
+V +YRK + E NVR I+KV+EAKARKK+ +R++K+KKK ET+ME D ++ EK R
Sbjct: 730 VVEKYRKSKDEFNVRTIKKVMEAKARKKRHATKRLEKIKKKAETIMENVDNTNQEKIR 787
>gi|312372717|gb|EFR20615.1| hypothetical protein AND_19798 [Anopheles darlingi]
Length = 890
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 270/496 (54%), Gaps = 108/496 (21%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+DK + + +ELKTWK DVVL+DG+PNVG NW++DAY Q CLTL A+KLA+ L+ G
Sbjct: 92 DITSDKTKSDLAKELKTWKADVVLNDGAPNVGKNWLHDAYQQVCLTLSAVKLATQFLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF+TKVFRSKDY +L+W+ KQLF++VH+TKP ASRKESAEIFVVCQHY AP K+D +F
Sbjct: 152 GWFITKVFRSKDYNALIWVLKQLFKKVHATKPSASRKESAEIFVVCQHYRAPDKIDPRFL 211
Query: 123 DPKYAFKELGAE--DGK-LNALK---KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETP 176
D KY F+EL E DG LN LK +K +K K GY S
Sbjct: 212 DSKYVFEELDIEPKDGAGLNILKELERKVAKKPKVEGYDS-------------------- 251
Query: 177 TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
T+V K +R EFLQ+ K L +
Sbjct: 252 -------TDVRKIVTAR------------EFLQQEKPLPVLSRV---------------T 277
Query: 237 IIHFD--DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
I F D + HP TT E++ECCKDI++LGRKD++ LL+W K+LH E ++E+
Sbjct: 278 EIRFTETDADIANHPRTTAELKECCKDIKILGRKDMKELLRWHKLLHPEFAGPKEEDASG 337
Query: 295 GGEGEEEEKVVEDEMDEEEK------------------ELMKATKEIEELKDEERRELKR 336
++ K + + D++E EL + KE+ LK+++ RE KR
Sbjct: 338 KDAKGKDGKKQKKQKDKKEGDDSDEEGDDEEEEDEDTVELRQLDKELANLKEDQTRESKR 397
Query: 337 KKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFA 396
+KK +KER KL E+++LKM++KGD GPTE + FKLS + + +L+ + P++ +
Sbjct: 398 MRKKANKERAKLNERLSLKMVIKGDEGPTEQSSDVTFKLSDVASKQELERMLDQPPDLPS 457
Query: 397 D---SDEEHIDIVPKKIKYNVEK----------------------SELDDSGLYYKNPDD 431
D SDEE + K ++YN E S+ D GL + D+
Sbjct: 458 DGDVSDEEKVRRKAKYVRYNRETKGDLYEDDELMGQGSASESEPDSDFDKKGLALNSDDE 517
Query: 432 SDLEFESSSEDENDVE 447
+L FE EDE+ V+
Sbjct: 518 GELSFE---EDEDRVD 530
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNR+F FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D +K+
Sbjct: 23 GYRSRAAFKLIQLNRRFAFLQQSQVCIDLCAAPGGWMQVAKQNMPVSSIVIGVDLYPIKN 82
Query: 249 -PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P + + D + D+ LK WK VL+D
Sbjct: 83 VPGCISLVGDITSD---KTKSDLAKELKTWKADVVLND 117
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 43/57 (75%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
V+ YRK + E NVR I+KV+EAKARKK+ +R++K+KKK E++ME D ++ EK R
Sbjct: 743 VDRYRKTKDEFNVRTIKKVMEAKARKKRHATKRLEKIKKKAESIMENVDNTNQEKIR 799
>gi|195133724|ref|XP_002011289.1| GI16447 [Drosophila mojavensis]
gi|193907264|gb|EDW06131.1| GI16447 [Drosophila mojavensis]
Length = 826
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 176/396 (44%), Positives = 236/396 (59%), Gaps = 58/396 (14%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW+YDAY Q CLTL ALKL + L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLGTQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP ++D +
Sbjct: 150 GGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDRIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL E + N+L + +K KA GY L +L S+F++ E
Sbjct: 210 LLDAKYVFEELDLEGKQKNSLLHPEKQKRVKAEGYTEQDIALRNDLAASEFMKAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DDE + KH TT EI ECCKD++VLGRKD++ LL WWK + +E + E E E E +
Sbjct: 278 IDDERIAKHKRTTTEILECCKDLKVLGRKDIKGLLLWWKHIKEELFKTEPEGVIEEPETD 337
Query: 300 EEEKVVEDEM--DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
++ + E D E+ EL ++IE L +EE++ELKRK+KK K + KL EKMNL M+
Sbjct: 338 KQPAPLTQEQVEDMEDAELQ---QQIETLAEEEQKELKRKRKKTLKAKAKLHEKMNLNMV 394
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPE 393
+KGD GP E ++E+F L I + +L+ + +P+
Sbjct: 395 IKGDDGPVEEGEQEIFDLKGIDSISELNNMLDVQPD 430
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D ++
Sbjct: 23 GFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + + E + R+ + L+ WK VLHD
Sbjct: 83 IAGCIGLVEDITTEKC--RQSLTKELQSWKADVVLHD 117
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARKK+R +R+ K KK E +ME D + EKA+ +
Sbjct: 694 LTEEYQRKVQELNVRPIKKVMEAKARKKRRATKRLAKAKKMAEKIMENADATSQEKAKQL 753
Query: 539 R 539
+
Sbjct: 754 K 754
>gi|195059568|ref|XP_001995663.1| GH17878 [Drosophila grimshawi]
gi|193896449|gb|EDV95315.1| GH17878 [Drosophila grimshawi]
Length = 836
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 191/449 (42%), Positives = 264/449 (58%), Gaps = 64/449 (14%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T EL++WKVDVVLHDG+PNVG NW+YDAY Q CLTL ALKLA+ ++
Sbjct: 90 VEDITTEKCRQSLTMELQSWKVDVVLHDGAPNVGRNWLYDAYQQICLTLNALKLATQFMR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GGWFVTKVFRSKDY SLLW+ KQLF++VH+TKP ASRKESAEIFVVCQ+Y+AP +D +
Sbjct: 150 KGGWFVTKVFRSKDYNSLLWVLKQLFKKVHATKPSASRKESAEIFVVCQYYLAPDHIDPR 209
Query: 121 FFDPKYAFKELGAEDGK--LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
D KY F+EL E + L ++ ++ KA GY L +L S+F++ +
Sbjct: 210 LLDSKYVFEELDLEGSSKTTSLLHPERQKRIKAEGYTEQDMSLRNDLAASEFMKSDNALA 269
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
LQ G G I
Sbjct: 270 ALQ-----GIGS-----------------------------------------------I 277
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE--KTEKEKEEEKEGG 296
DDE + KH TT EI ECCKD++VLGRKD++ LL WWK + +E KT+K EE+E
Sbjct: 278 TMDDERIAKHKGTTPEILECCKDLKVLGRKDIKGLLLWWKRVKEELFKTDKGIIEEQEVE 337
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+ + E D E+ EL ++I L DEE+++LKRK+KK K + KL +KMNL M
Sbjct: 338 VEQPQPLTQEQIEDMEDAELQ---QQIGLLADEEQKDLKRKRKKTLKSKAKLHDKMNLNM 394
Query: 357 LLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVEK 416
++KGD GP E + E+F L I++ ++LD + P+ + D + +PK KY+ +
Sbjct: 395 VIKGDDGPVEETEHEIFDLRDIKSLNELDEVLDVNPDFDLEGDAVELPKLPKYKKYDKDD 454
Query: 417 SELDDSGLYYKNPDDSDLEFESSSEDEND 445
+DD Y+N D+ D+ S+E++ND
Sbjct: 455 KRMDDDA-NYENDDEPDV----SAEEDND 478
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G+RSRAAFKLIQLNRK+ FLQ+S+VCVDLCAAPGGWMQVAKQNM SSI+
Sbjct: 23 GFRSRAAFKLIQLNRKYGFLQESQVCVDLCAAPGGWMQVAKQNMPVSSIV 72
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARKK+R +R+ K KK E +ME D + EKA+ +
Sbjct: 698 LQEEYQRKVQELNVRPIKKVMEAKARKKRRSTKRLAKAKKMAEKIMENADATSQEKAKQL 757
Query: 539 R 539
+
Sbjct: 758 K 758
>gi|18859957|ref|NP_573099.1| CG8939 [Drosophila melanogaster]
gi|7293173|gb|AAF48557.1| CG8939 [Drosophila melanogaster]
gi|17862372|gb|AAL39663.1| LD23718p [Drosophila melanogaster]
gi|220944838|gb|ACL84962.1| CG8939-PA [synthetic construct]
Length = 817
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 241/410 (58%), Gaps = 57/410 (13%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW+YDAY Q CLTL ALKL++ L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP +D +
Sbjct: 150 NGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDHIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL + K ++L + +K KA GY + L +L ++F++ E
Sbjct: 210 LLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIALRNDLAATEFLKAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DD+ + H TT EI ECCKD++VLGRKD++ L++WWK + + EKE E
Sbjct: 278 IDDQRIANHKKTTPEILECCKDLKVLGRKDIKGLVQWWKDVRELFVEKETPLVVGNAADE 337
Query: 300 EEEKVVEDEM-DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+ + + + E+ D E+ EL +IE + +EE+++LKRK+KK K + KL EKMNL M++
Sbjct: 338 KPKPLTQAEIEDMEDAELQ---TQIETIVEEEKKDLKRKRKKTLKTKAKLHEKMNLNMVI 394
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPK 408
KGD GP E + E+F L IRT+ +LD + +P+ D + +PK
Sbjct: 395 KGDDGPVEEMEHEIFDLKNIRTSAELDELLDVQPDFAVDESQPEETKLPK 444
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 46/50 (92%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+
Sbjct: 23 GLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIV 72
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARK +R +R+ K KK E +ME D ++ EK++ +
Sbjct: 687 LTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAKAKKMAEKIMENSDATNHEKSKQL 746
Query: 539 R 539
+
Sbjct: 747 K 747
>gi|194894024|ref|XP_001977991.1| GG17939 [Drosophila erecta]
gi|190649640|gb|EDV46918.1| GG17939 [Drosophila erecta]
Length = 816
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 242/410 (59%), Gaps = 57/410 (13%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW+YDAY Q CLTL ALKL++ L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP +D +
Sbjct: 150 NGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDHIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL + K ++L + +K KA GY + L +L ++F++ E
Sbjct: 210 LLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIALRNDLAATEFLKAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DDE + KH TT EI ECCKD+++LGRKD++ L++WWK + + +KE E E
Sbjct: 278 IDDERIAKHKKTTPEILECCKDLKLLGRKDIKGLVQWWKDVRELFVKKETPLVVGDAEEE 337
Query: 300 EEEKVVEDEM-DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+ + + + E+ D E+ EL +I+ + +EE+++LKRK+KK K + KL EKMNL M++
Sbjct: 338 KPKPLTQAEIEDMEDAELQ---TQIDTIVEEEKKDLKRKRKKTLKTKAKLHEKMNLNMVI 394
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPK 408
KGD GP E + E+F L I T+ +LD + +P+ D + +PK
Sbjct: 395 KGDDGPVEEMEHEIFDLKNINTSAELDELLDVQPDFAVDETQPEQAKLPK 444
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D ++
Sbjct: 23 GLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ + + E DI R+ + L+ WK VLHD
Sbjct: 83 IAGCIGLVE---DITTEKCRQSLTKELQSWKADVVLHD 117
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARK +R +R+ K KK E +ME D ++ EK++ +
Sbjct: 686 LTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAKAKKMAEKIMENTDATNHEKSKQL 745
Query: 539 R 539
+
Sbjct: 746 K 746
>gi|195479104|ref|XP_002100764.1| GE17245 [Drosophila yakuba]
gi|194188288|gb|EDX01872.1| GE17245 [Drosophila yakuba]
Length = 819
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 245/413 (59%), Gaps = 62/413 (15%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW+YDAY Q CLTL ALKL++ L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTLFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP +D +
Sbjct: 150 NGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDHIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL + K ++L + +K KA GY + L +L ++F++ E
Sbjct: 210 LLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIALRNDLAATEFMKAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DDE + KH TT EI ECCKD+++LGRKD++ L++WWK + + +KE G+GE
Sbjct: 278 IDDERIAKHKKTTPEILECCKDLKLLGRKDIKGLMQWWKDVRELFVKKET--PLVVGDGE 335
Query: 300 EE---EKVVEDEM-DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
EE + + + E+ D E+ EL +I+ + +EE+++LKRK+KK K + KL EKMNL
Sbjct: 336 EEKPKKPLTQAEIEDMEDAELQ---TQIDTIVEEEKKDLKRKRKKTLKTKAKLHEKMNLN 392
Query: 356 MLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPK 408
M++KGD GP E + E+F L I T+ +LD + +P+ D + +PK
Sbjct: 393 MVIKGDDGPVEEMEHEIFDLKNINTSAELDDLLDVQPDFAVDETQPEQAKLPK 445
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 46/50 (92%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+
Sbjct: 23 GLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIV 72
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARK +R +R+ K KK E +ME D ++ EK++ +
Sbjct: 689 LTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAKAKKMAEKIMENNDATNHEKSKQL 748
Query: 539 R 539
+
Sbjct: 749 K 749
>gi|195357054|ref|XP_002044929.1| GM11680 [Drosophila sechellia]
gi|194124271|gb|EDW46314.1| GM11680 [Drosophila sechellia]
Length = 817
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/410 (42%), Positives = 243/410 (59%), Gaps = 57/410 (13%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW+YDAY Q CLTL ALKL++ L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP +D +
Sbjct: 150 NGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPDHIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL + K ++L + +K KA GY + L +L ++F+ +
Sbjct: 210 LLDSKYVFEELDLDAKKKSSLLHPEKQKRIKAEGYTAQDIALRNDLAATEFLMADNALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ G G I
Sbjct: 270 LQ-----GIGS-----------------------------------------------IR 277
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DD+ + H TT EI ECCKD++VLGRKD++ L++WWK + + +KE G + E
Sbjct: 278 IDDQRIANHKKTTPEILECCKDLKVLGRKDIKGLVQWWKDVRELFVKKE-APLVVGNDAE 336
Query: 300 EEEK-VVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E+ K + + E+++ E +K +IE + +EE+++LKRK+KK K + KL EKMNL M++
Sbjct: 337 EKPKPLTQAEIEDMEDAELKT--QIETIVEEEKKDLKRKRKKTLKTKAKLHEKMNLNMVI 394
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPK 408
KGD GP E + E+F L IRT+ +LD + +P+ D + +PK
Sbjct: 395 KGDDGPVEEMEHEIFDLKNIRTSAELDELLDVQPDFAVDETQPEETKLPK 444
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 46/50 (92%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+
Sbjct: 23 GLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIV 72
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARK +R +R+ K KK E +ME D ++ EK++ +
Sbjct: 687 LTAEYQRKLQEVNVRPIKKVMEAKARKHRRATKRLAKAKKMAEKIMENSDATNHEKSKQL 746
Query: 539 R 539
+
Sbjct: 747 K 747
>gi|194749909|ref|XP_001957378.1| GF10393 [Drosophila ananassae]
gi|190624660|gb|EDV40184.1| GF10393 [Drosophila ananassae]
Length = 817
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/402 (44%), Positives = 241/402 (59%), Gaps = 58/402 (14%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL+TWK DVVLHDG+PNVG NW+YDAY Q CLTL +LKLA+ L+
Sbjct: 90 VEDITTEKCRQSLTKELQTWKADVVLHDGAPNVGRNWIYDAYQQICLTLNSLKLATQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRSKDY +LLW+ KQLF++VH+TKP ASRKESAEIFVVCQ Y+AP +D +
Sbjct: 150 SGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVCQGYLAPNHIDHR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKS-KALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D KY F+EL E N+L + +K KA GY L L +F++ E
Sbjct: 210 LLDSKYVFEELDLEAKTKNSLLHPEKQKRIKAEGYTEKEVALRNELSALEFMQAENALAA 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
LQ + S +I
Sbjct: 270 LQG--------------------------------------------------VGSVVI- 278
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
DDE + H TT EI ECCKD++VLGRKD++ L++WWK + + +EK+ +K E
Sbjct: 279 -DDERIANHKKTTKEILECCKDLKVLGRKDIKGLIQWWKTVRESLGFQEKKLDKTPTEEV 337
Query: 300 EEEKVVEDEM-DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E + + + + D E+ EL ++I ELK+EE +ELKRKKKK K ++KL EKMNL ML+
Sbjct: 338 EPKPLTQAGVEDMEDAELQ---QQISELKEEELKELKRKKKKTLKIKSKLHEKMNLNMLI 394
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
KGD GP E + E+F L IRT ++L + +P+ FA +D+
Sbjct: 395 KGDDGPVEEAEHEIFDLKGIRTDEELKEMLDVEPD-FALNDD 435
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D ++
Sbjct: 23 GFRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ + + E DI R+ + L+ WK VLHD
Sbjct: 83 IAGCIGLVE---DITTEKCRQSLTKELQTWKADVVLHD 117
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L +EY +K++E+N RPI+KV+EAKARKK+R +RM K KK E +ME D + EKA+ +
Sbjct: 682 LADEYERKKLELNARPIKKVMEAKARKKRRATKRMAKAKKMAEKIMENADATSHEKAKQL 741
Query: 539 R 539
+
Sbjct: 742 K 742
>gi|240995616|ref|XP_002404632.1| ribosomal RNA methyltransferase, putative [Ixodes scapularis]
gi|215491634|gb|EEC01275.1| ribosomal RNA methyltransferase, putative [Ixodes scapularis]
Length = 817
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 235/397 (59%), Gaps = 63/397 (15%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT CR + +ELKTWK D+VL+DG+PNVG +WV+DAY Q LTL A+KLA+ L +
Sbjct: 91 DDITTGSCRFKLKKELKTWKADIVLNDGAPNVGKSWVHDAYGQNVLTLHAVKLATEFLTK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRSKDY +L+W+ K+LF+++ +TKPQASR ESAEIFVVCQ+YIAP K+D+KF
Sbjct: 151 GGWFITKVFRSKDYQALMWVLKKLFRKISATKPQASRHESAEIFVVCQYYIAPDKIDSKF 210
Query: 122 FDPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP Y F ++ E KLNA ++ +K+KA GYP LY + V FI E LL
Sbjct: 211 LDPAYVFGDVDTGEAAKLNAAHPEK-QKAKAEGYPEGDYTLYHRVSVLDFIRCEDHLELL 269
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+E +
Sbjct: 270 GQCSE----------------------------------------------------VVL 277
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
D++ VL HPSTT EI+ECCKDI+VLGR D++NLL W K L K EEK EG+
Sbjct: 278 DNQEVLDHPSTTEEIKECCKDIKVLGRGDIKNLLTWRKKL------KTWFEEKAKAEGKV 331
Query: 301 EEKVVEDEMDEE--EKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+E VE+ D+E E E ++ K EE+ E+ +E K+K+KK+ K+R KL+++MNL+M+L
Sbjct: 332 DEAEVEEVADDEGSEDEELQLLKHAEEVTAEQAKEEKKKRKKMLKQRKKLRDRMNLQMVL 391
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVF 395
K D P D+++FKL I++ QL + + P V
Sbjct: 392 KDD-DPIVERDDDLFKLKAIKSKKQLSKVEEADPSVL 427
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNRKFEFLQKS+V +DLCAAPGGW+QVA++ M SS+I D ++
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLQKSRVLIDLCAAPGGWLQVAQKYMPVSSVIVGVDLVPIRA 82
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ IQ+ DI R ++ LK WK VL+D
Sbjct: 83 IPNVITIQD---DITTGSCRFKLKKELKTWKADIVLND 117
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A +V EY+ + +N RPI+KV EAKARKK+R ARR++K +K+ E + E D++DAEKA+
Sbjct: 696 AEMVAEYKAQLKAVNARPIKKVAEAKARKKQRAARRLEKARKRAEAITEKLDMTDAEKAQ 755
Query: 537 NIRA 540
+RA
Sbjct: 756 QVRA 759
>gi|442750233|gb|JAA67276.1| Putative sam-dependent rrna methyltransferase spb1 [Ixodes ricinus]
Length = 820
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/397 (43%), Positives = 233/397 (58%), Gaps = 63/397 (15%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT CR + +ELKTWK D+VL+DG+PNVG +WV+DAY Q LTL A+KLA+ L +
Sbjct: 91 DDITTGSCRSKLKKELKTWKADIVLNDGAPNVGKSWVHDAYGQNVLTLHAVKLATEFLTK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TK FRSKDY +L+W+ K+LF+++ +TKPQASR ESAEIFVVCQ+YIAP K+D KF
Sbjct: 151 GGWFITKGFRSKDYQALMWVLKKLFRKISATKPQASRHESAEIFVVCQYYIAPDKIDNKF 210
Query: 122 FDPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP Y F ++ E KLNA ++ +K+KA GYP LY + V FI E LL
Sbjct: 211 LDPAYVFGDVDTGEVSKLNAAHPEK-QKAKAEGYPEGDYTLYHRVSVLDFIRCEDHLELL 269
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+E +
Sbjct: 270 GQCSE----------------------------------------------------VVL 277
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
D++ VL HPSTT EI+ECCKDI+VLGR D++NLL W K L K EEK EG+
Sbjct: 278 DNQEVLDHPSTTEEIKECCKDIKVLGRGDIKNLLTWRKKL------KTWFEEKAKAEGKV 331
Query: 301 EEKVVEDEMDEE--EKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+E VE+ D+E E E ++ K EE+ E+ +E K+K+KK+ K+R KL+++MNL+M+L
Sbjct: 332 DEAEVEEVADDEGSEDEELQLLKHAEEVTAEQAKEEKKKRKKMLKQRKKLRDRMNLQMVL 391
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVF 395
K D P D+++FKL I++ QL + + P V
Sbjct: 392 KDD-DPIVERDDDLFKLKAIKSKKQLSKVEEADPSVL 427
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNRKFEFL S+V +DLCAAPGGW+QVA++ M SS+I D ++
Sbjct: 23 GYRSRAAFKLIQLNRKFEFLXXSRVLIDLCAAPGGWLQVAQKYMPVSSVIVGVDLVPIRA 82
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ IQ+ DI R ++ LK WK VL+D
Sbjct: 83 IPNVITIQD---DITTGSCRSKLKKELKTWKADIVLND 117
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A +V EY+ + +N RPI+KV EAKARKK+R ARR++K +K+ E + E D++DAEKA+
Sbjct: 699 AEMVAEYKAQLKAVNARPIKKVAEAKARKKQRAARRLEKARKRAEAITEKLDMTDAEKAQ 758
Query: 537 NIRA 540
+RA
Sbjct: 759 QVRA 762
>gi|355689325|gb|AER98796.1| FtsJ-like protein 3 [Mustela putorius furo]
Length = 436
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 225/407 (55%), Gaps = 83/407 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E+ D
Sbjct: 269 KASEIS----------------------------------------------------LD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +IQ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIQACCQDIKVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSS 336
Query: 294 ------------EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKV 341
+ G G++ K DEEE++L + + E+K +E +LKRKKKK+
Sbjct: 337 GEEEEEEGEEESKAGTGQQLSK-----EDEEEEQL---NRTLAEMKAQEVADLKRKKKKL 388
Query: 342 SKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 389 LREQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEAVT 434
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
>gi|390463195|ref|XP_003732988.1| PREDICTED: LOW QUALITY PROTEIN: putative rRNA methyltransferase 3
[Callithrix jacchus]
Length = 839
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 226/397 (56%), Gaps = 65/397 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PN+G +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNIGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPVKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E+ D
Sbjct: 269 KASEI----------------------------------------------------MID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE +++HP+TT +IQ CC+DIRVLGRK++R+LL W L +K KE+ +
Sbjct: 277 DEELVQHPATTEDIQVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAEALDISLSS 336
Query: 294 -EGGEGEEEEKVVEDEMD-EEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
E EG+E++ + + EE+E + + ++K +E ELKRKKKK+ +E+ K +E+
Sbjct: 337 GEEDEGDEKDSIAGTTVQPSEEEEEEQLNHTLAKIKAQEVAELKRKKKKLLREQRKQRER 396
Query: 352 MNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+ LKM L G + + + MF L IR L+ +T
Sbjct: 397 VELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 432
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ +KK E ++ D+S+ EK +R
Sbjct: 714 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTRKKAEAVVNTVDISEREKVAQLR 773
Query: 540 A 540
+
Sbjct: 774 S 774
>gi|91090288|ref|XP_971422.1| PREDICTED: similar to CG8939 CG8939-PA [Tribolium castaneum]
gi|270013436|gb|EFA09884.1| hypothetical protein TcasGA2_TC012032 [Tribolium castaneum]
Length = 805
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/186 (63%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR+++ +EL+TWK DVVLHDG+PNVG NW++DAY Q CLTL +LKLAS LK+
Sbjct: 91 EDITTEKCRVSLKKELQTWKADVVLHDGAPNVGKNWLHDAYQQACLTLSSLKLASEFLKK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRSKDY SL+W+ KQ F++VH+TKPQASR ESAEIFVVCQHYIAP K+D+KF
Sbjct: 151 GGWFITKVFRSKDYHSLIWVLKQFFKKVHATKPQASRNESAEIFVVCQHYIAPDKIDSKF 210
Query: 122 FDPKYAFKELGAED-GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPKY F+EL E GKLN ++ +KSKA GYP + LY + S FI+H T LL
Sbjct: 211 MDPKYVFEELEIEPKGKLNIYHPEKNKKSKAEGYPENDWTLYHKIKASDFIKHPTGIELL 270
Query: 181 QHATEV 186
+ A+E+
Sbjct: 271 EGASEI 276
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKFEFLQKS+VC+DLCAAPGGWMQVAKQNM SS+I D +K
Sbjct: 23 GFRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAKQNMPVSSVIIGIDLFPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ + E DI R ++ L+ WK VLHD
Sbjct: 83 IPGCISLTE---DITTEKCRVSLKKELQTWKADVVLHD 117
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV +Y+K E+NVRPI+KV+EAKARKKKR ++++K KKK+E LM+ DV+D EKAR I
Sbjct: 675 LVQDYKKHLEELNVRPIKKVIEAKARKKKRALKKLEKAKKKVENLMDNVDVTDREKARQI 734
Query: 539 R 539
+
Sbjct: 735 K 735
>gi|354479439|ref|XP_003501917.1| PREDICTED: putative rRNA methyltransferase 3 [Cricetulus griseus]
gi|344243070|gb|EGV99173.1| Putative rRNA methyltransferase 3 [Cricetulus griseus]
Length = 830
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 186/482 (38%), Positives = 260/482 (53%), Gaps = 84/482 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E+ D
Sbjct: 269 KASEIS----------------------------------------------------ID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------E 294
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRACCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 GGEGEEEEKVVEDEM-DEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E +E+E + E + D EE+E + + + E+K +E ELKRKKKK+ +E+ K +E++
Sbjct: 337 EEERDEDESIAETKQEDSEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVE 396
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYN 413
LKM L G + + + MF L IR L+ +T ++ + + +P Y
Sbjct: 397 LKMDLPG-VSIADEGETGMFSLRTIRGQQLLEEVTQGD----MNAADTFLSDLPTDDIYV 451
Query: 414 VEKSELDDSGLYYKNPDDSDLEFE--------SSSEDENDVEKKLVEEEFDTDEEDGLGK 465
+ E D++ L +SDL+ E SS +D ++ V+ DT EE+G
Sbjct: 452 SDAEEEDETSL------ESDLDSEELAGVRTHSSQKDRKCLQSAQVD---DTKEEEGENP 502
Query: 466 LL 467
LL
Sbjct: 503 LL 504
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 707 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 766
Query: 540 A 540
+
Sbjct: 767 S 767
>gi|291406359|ref|XP_002719522.1| PREDICTED: FtsJ homolog 3 [Oryctolagus cuniculus]
Length = 836
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 224/399 (56%), Gaps = 67/399 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG+F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGYFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRASVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +++ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDVRACCQDIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKALDISLSS 336
Query: 294 ----EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
E EE + + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +
Sbjct: 337 GEEEGEEEEEESAAGITRQPSKEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQR 396
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
E++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 ERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 434
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 713 VEHYRKRWKEINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 772
Query: 540 A 540
+
Sbjct: 773 S 773
>gi|311266963|ref|XP_003131335.1| PREDICTED: putative rRNA methyltransferase 3 [Sus scrofa]
Length = 836
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 225/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLGR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEIQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IAID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +++ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELARHPATTEDVRACCQDIRVLGRKELRSLLNWRTKLRRHVAKKLKEQAKAMDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E GE EE+ + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEGEEEEQAARASQQPSKEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 713 VEYYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 772
Query: 540 A 540
+
Sbjct: 773 S 773
>gi|390354975|ref|XP_787153.2| PREDICTED: putative rRNA methyltransferase 3-like
[Strongylocentrotus purpuratus]
Length = 914
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 165/402 (41%), Positives = 227/402 (56%), Gaps = 58/402 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT KCR+ + +E+KTWK D VLHDG+PNVG +WV DA+ Q LTL ALKLA L +G
Sbjct: 92 DITTTKCRMQLRKEMKTWKADCVLHDGAPNVGTSWVLDAFTQAQLTLHALKLAVEFLNKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF+TKVFRSKDY LLW+F Q+F++VH TKPQASR ESAEIFVVCQ +I+P K+D KFF
Sbjct: 152 GWFITKVFRSKDYQPLLWVFHQMFRKVHVTKPQASRNESAEIFVVCQGFISPDKIDPKFF 211
Query: 123 DPKYAFKEL-GAEDGKLNAL---KKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPKY FKE+ G E K A +V+K+KA GY LY + VSK++ E
Sbjct: 212 DPKYIFKEVVGEETTKQKATILRDPSKVKKAKAEGYAEGDYTLYHPVQVSKYMASEDALE 271
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
LL + +E +
Sbjct: 272 LLNNCSE----------------------------------------------------L 279
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
FDD+S+ H TT EI+ CC+DI+VLGR++VR+LL W K + EK + E+E + E
Sbjct: 280 VFDDDSIASHHLTTKEIKICCRDIKVLGRREVRDLLNWHKKYNKEKAQLEEETANQVKEK 339
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+ E ED EE+++ + A K++ +K+EER KRKKK K+R KL+E+++ L
Sbjct: 340 SKLEGKDEDGESEEDEDDVVA-KQLATIKEEERLAGKRKKKDALKKRKKLRERLHKSKEL 398
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
+ ++G + E +F L I+ QL + A+ ++
Sbjct: 399 QSNMG-DDTQGESLFGLVNIKNAQQLQKVNTDDAGTVANDND 439
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNRKF FLQ+S+VC+DLCAAPGGW+QVA +NM SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRKFSFLQESRVCIDLCAAPGGWLQVASRNMPISSMIIGVDLFPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
V C R +R +K WK VLHD
Sbjct: 83 IPNVVSF--TCDITTTKCRMQLRKEMKTWKADCVLHD 117
>gi|427788789|gb|JAA59846.1| Putative sam-dependent rrna methyltransferase spb1 [Rhipicephalus
pulchellus]
Length = 800
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 242/418 (57%), Gaps = 68/418 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT CR + +ELKTWK D+VL+DG+PNVG +WV+DAY Q LTL A+KLA+ L +
Sbjct: 91 DDITTGSCRTKLKKELKTWKADIVLNDGAPNVGKSWVHDAYGQNVLTLHAVKLATEFLNK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRSKDY +L+W+ K+LF+++ +TKPQASR ESAEIFVVCQ YIAP K+D +F
Sbjct: 151 GGWFITKVFRSKDYQALMWVLKKLFKKISATKPQASRHESAEIFVVCQSYIAPDKIDPRF 210
Query: 122 FDPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP + F ++ E KLN ++ +K KA GYP + LY +PV F++ E +L
Sbjct: 211 LDPAHLFSDVDTGEVAKLNPAHPEK-QKPKAEGYPENDYTLYHRVPVMDFLKCENHLEVL 269
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+E +
Sbjct: 270 GQCSE----------------------------------------------------VVI 277
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
DDE VL HP TT EI ECCKDI+VLGR D++NLL W K L K EEK+ E E
Sbjct: 278 DDEEVLAHPLTTQEIIECCKDIKVLGRGDIKNLLTWRKKL------KAWLEEKDKKEEET 331
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
+E+ VE+ +E + E ++ K EE+ E+ RELK+KKKKV K+R KL+++MNL+M+LK
Sbjct: 332 KEEGVEEVEEETDDEELQLLKHAEEVTAEQARELKKKKKKVLKQRKKLRDRMNLQMVLKN 391
Query: 361 DLGPTENDDEEMFKL------SQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKY 412
D E +D ++FKL Q+ D++D+ T + D D E +D K++ Y
Sbjct: 392 DQAIVE-EDLDLFKLKAIKNEKQLSNVDEVDVGTLDPAQPLED-DIEDLDHRKKRVSY 447
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLIQLNRKFEFLQ+S+V +DLCAAPGGW+QVA++ M SS+I D ++
Sbjct: 23 GFRSRAAFKLIQLNRKFEFLQRSRVLIDLCAAPGGWLQVAQKYMPVSSVIIGVDLVPIRP 82
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ IQ+ DI R ++ LK WK VL+D
Sbjct: 83 IPNVIAIQD---DITTGSCRTKLKKELKTWKADIVLND 117
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A +V EY+ + +N RPI+KV EAKARKK R AR+++K +K+ ET+ E D++DAEKA+
Sbjct: 679 AEMVAEYKAQLKAVNARPIKKVAEAKARKKLRAARKLEKARKRAETITEKLDMTDAEKAQ 738
Query: 537 NIRA 540
IRA
Sbjct: 739 QIRA 742
>gi|410921658|ref|XP_003974300.1| PREDICTED: pre-rRNA processing protein FTSJ3-like [Takifugu
rubripes]
Length = 778
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 225/385 (58%), Gaps = 63/385 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG NW +DA+ Q LTL ALKLA L +
Sbjct: 91 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQHDAFSQAHLTLMALKLACEFLTK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY LLWIF+Q F +V STKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGTFVTKVFRSKDYQPLLWIFQQFFNKVQSTKPQASRNESAEIFVVCQGFLAPDKIDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L V+K KA GY L+ + P++ F++ E P
Sbjct: 211 FDPKHAFKEVEVQAKTVRELIP--VKKPKAEGYTDGDLTLFHSFPITAFLKAENPV---- 264
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+FL K AS II FD
Sbjct: 265 ------------------------DFLAK-----------------------ASEII-FD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
++ + H +TT EI+ECC+DIRVLGRK++R LL W L ++K K E K
Sbjct: 277 NKDLESHAATTNEIKECCRDIRVLGRKELRQLLSWRSKLRRYLSKKLKMEAKSLQDEINL 336
Query: 294 EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E +E ++ E ++++ + + +++ +LK EE ELKRKKKKV KER K +E++
Sbjct: 337 SSDEEKEPDENKEGREEDDDDDEEEMERKLAQLKAEEVAELKRKKKKVLKERRKQRERVA 396
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQI 378
LKM L G + + D MF LS I
Sbjct: 397 LKMDLPG-VSIADGGDSSMFSLSTI 420
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR++FKLIQLNRKF+FLQK++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE + R+ +R L+ WKV
Sbjct: 83 IPNVVALQEDITTEKC--RQALRKELQTWKV 111
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EY++K EIN RPI++V EAKARKK+R ++M++ KKK E ++ D+S+ EK +
Sbjct: 637 MVEEYKEKWKEINARPIKRVAEAKARKKRRMLKKMEQAKKKAEAVVNTVDISEREKMAQL 696
Query: 539 RA 540
++
Sbjct: 697 KS 698
>gi|149723383|ref|XP_001501025.1| PREDICTED: putative rRNA methyltransferase 3-like [Equus caballus]
Length = 837
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 168/402 (41%), Positives = 226/402 (56%), Gaps = 69/402 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQTKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 -----EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKL 348
EG E E + V + +EE+E + + + E+K +E ELKRKKKK+ +E+ K
Sbjct: 337 GEEEEEGNEEESTARTVR-QPSKEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQ 395
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
+E++ LKM L G + + + MF L IR L+ +TA
Sbjct: 396 RERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEKVTAG 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 712 VERYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 771
Query: 540 A 540
+
Sbjct: 772 S 772
>gi|197097760|ref|NP_001125667.1| pre-rRNA processing protein FTSJ3 [Pongo abelii]
gi|73621845|sp|Q5RAS1.1|RRMJ3_PONAB RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|55728800|emb|CAH91139.1| hypothetical protein [Pongo abelii]
Length = 841
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 224/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ G E+ ++ +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEDEGNEEDSTAGTTEQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGQQLLEEVT 433
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 483 YRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R+
Sbjct: 721 YRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRS 778
>gi|301778303|ref|XP_002924561.1| PREDICTED: putative rRNA methyltransferase 3-like [Ailuropoda
melanoleuca]
gi|281351660|gb|EFB27244.1| hypothetical protein PANDA_013937 [Ailuropoda melanoleuca]
Length = 831
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 162/404 (40%), Positives = 221/404 (54%), Gaps = 81/404 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEIEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E+ D
Sbjct: 269 KASEIS----------------------------------------------------LD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +++ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDVRACCQDIKVLGRKELRSLLNWRTKLRRFVAKKLKEQAKALDISLSS 336
Query: 294 ---------EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKE 344
+ G G + EE+E + + + E+K +E ELKRKKKK+ +E
Sbjct: 337 GEEEGEEESQAGTGRQP---------SEEEEEERLNQTLAEMKAQEVAELKRKKKKLLRE 387
Query: 345 RTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 388 QRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 430
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YR++ EIN RPI+KV EAKARKK+R +++++ KKK E +M D+S+ EK +R
Sbjct: 708 VEHYRRRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVMNTVDISEREKVAQLR 767
Query: 540 A 540
+
Sbjct: 768 S 768
>gi|351704432|gb|EHB07351.1| Putative rRNA methyltransferase 3 [Heterocephalus glaber]
Length = 832
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 221/396 (55%), Gaps = 64/396 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAH 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHCTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
D + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DNELAQHPATTEDIRACCQDIRVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSS 336
Query: 294 -EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKM 352
E EE + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E++
Sbjct: 337 GEEEGDEESTSETTRQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERI 396
Query: 353 NLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
LKM L G + + + MF L IR L+ +T
Sbjct: 397 ELKMDLPG-VSIADEGETGMFSLCTIRGHQLLEEVT 431
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 709 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTIDISEREKVAQLR 768
Query: 540 A 540
+
Sbjct: 769 S 769
>gi|194097365|ref|NP_060117.3| pre-rRNA processing protein FTSJ3 [Homo sapiens]
gi|296452883|sp|Q8IY81.2|RRMJ3_HUMAN RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|119614679|gb|EAW94273.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
gi|119614680|gb|EAW94274.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
gi|119614681|gb|EAW94275.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
Length = 847
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 224/406 (55%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 QDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF LS IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLSTIRGHQLLEEVT 436
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +Q+ R R+ +R LK WKV
Sbjct: 83 LPNVVTLQQDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 724 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 783
Query: 540 A 540
+
Sbjct: 784 S 784
>gi|340721144|ref|XP_003398985.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Bombus
terrestris]
Length = 852
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 2/187 (1%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR++I+RELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 91 VEDITTDKCRVSISRELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLAALKMATHFLR 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY +L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 151 PGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQASRAESAEIFVVCQYYIAPDKLDPK 210
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K K GYP + LY L V FI HE
Sbjct: 211 FLDPKYVFSELEIEPTNKLNVCNPAK-KKDKVEGYPENDYTLYHKLSVKDFIAHENAVEA 269
Query: 180 LQHATEV 186
LQ+A+E+
Sbjct: 270 LQNASEI 276
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLK 247
GYRSRAAFKLIQ+NRKFEFLQKS+VC+DLCAAPGGWMQ+A+QNM SS +I D +
Sbjct: 24 GYRSRAAFKLIQINRKFEFLQKSRVCIDLCAAPGGWMQIARQNMPVSSVVIGVDLFPIKP 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P +++ D R + LK WK VLHD
Sbjct: 84 IPGCISLVEDITTD---KCRVSISRELKTWKADVVLHD 118
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 53/62 (85%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV+EY+K+ ++NVRPI+KV+EAK+RKK+R R+++K KKK+ET+M+ D+SD EKA+ +
Sbjct: 708 LVDEYKKRVEDLNVRPIKKVIEAKSRKKRRALRKLEKAKKKVETIMDNTDISDREKAKQV 767
Query: 539 RA 540
+A
Sbjct: 768 QA 769
>gi|332243108|ref|XP_003270724.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Nomascus leucogenys]
Length = 840
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/438 (40%), Positives = 240/438 (54%), Gaps = 72/438 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ----EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
EG E + + EEE+E + + + E+K +E ELKRKKKK+ +E+ K +
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQR 396
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT---ASKPEVFADSDEEHIDIV 406
E++ LKM L G + + + MF L IR L+ +T S + F SD DI
Sbjct: 397 ERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVTQGDMSAADTFL-SDLPRDDIY 454
Query: 407 PKKIKYNVEKSELDDSGL 424
++ + + + L DSGL
Sbjct: 455 VSDVEDDGDDTSL-DSGL 471
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 717 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 776
Query: 540 A 540
+
Sbjct: 777 S 777
>gi|73965375|ref|XP_548033.2| PREDICTED: putative rRNA methyltransferase 3 [Canis lupus
familiaris]
Length = 834
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 220/407 (54%), Gaps = 83/407 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEIEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRASVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIWACCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ------------EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKV 341
E G G + K EE+E + + + E+K +E ELKRKKKK+
Sbjct: 337 GEEEEEEEGEESEAGTGRQPSK--------EEEEEEQLNRTLAEMKAQEVAELKRKKKKL 388
Query: 342 SKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 389 LREQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 434
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 22/153 (14%)
Query: 398 SDEEHIDIVPKKIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFD- 456
SD++ +IVP I+ V+ LD GL SS + + D L+++ F
Sbjct: 631 SDDDGFEIVP--IEDPVKHQILDPEGLAL------GAIIASSKKAKRD----LIDDSFSR 678
Query: 457 ---TDEEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARKKK 507
+EE L + EK + L + YR++ EIN RPI+KV EAKARKK+
Sbjct: 679 YTFNEEEGELPEWFVQEEKQHRIRQLPIDKKDIEHYRRRWREINARPIKKVAEAKARKKR 738
Query: 508 RQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
R +++++ KKK E ++ D+S+ EK +R+
Sbjct: 739 RMLKKLEQTKKKAEAVVNTVDISEREKVAQLRS 771
>gi|340721146|ref|XP_003398986.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Bombus
terrestris]
Length = 823
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 2/187 (1%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR++I+RELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 91 VEDITTDKCRVSISRELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLAALKMATHFLR 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY +L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 151 PGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQASRAESAEIFVVCQYYIAPDKLDPK 210
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K K GYP + LY L V FI HE
Sbjct: 211 FLDPKYVFSELEIEPTNKLNVCNPAK-KKDKVEGYPENDYTLYHKLSVKDFIAHENAVEA 269
Query: 180 LQHATEV 186
LQ+A+E+
Sbjct: 270 LQNASEI 276
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLK 247
GYRSRAAFKLIQ+NRKFEFLQKS+VC+DLCAAPGGWMQ+A+QNM SS +I D +
Sbjct: 24 GYRSRAAFKLIQINRKFEFLQKSRVCIDLCAAPGGWMQIARQNMPVSSVVIGVDLFPIKP 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P +++ D R + LK WK VLHD
Sbjct: 84 IPGCISLVEDITTD---KCRVSISRELKTWKADVVLHD 118
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 53/62 (85%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV+EY+K+ ++NVRPI+KV+EAK+RKK+R R+++K KKK+ET+M+ D+SD EKA+ +
Sbjct: 679 LVDEYKKRVEDLNVRPIKKVIEAKSRKKRRALRKLEKAKKKVETIMDNTDISDREKAKQV 738
Query: 539 RA 540
+A
Sbjct: 739 QA 740
>gi|355754285|gb|EHH58250.1| hypothetical protein EGM_08054 [Macaca fascicularis]
Length = 844
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 224/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ G+ E+ + + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEDEGDEEDSTAGITKQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-ISIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 721 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 780
Query: 540 A 540
+
Sbjct: 781 S 781
>gi|395826081|ref|XP_003786248.1| PREDICTED: putative rRNA methyltransferase 3 [Otolemur garnettii]
Length = 838
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/395 (42%), Positives = 226/395 (57%), Gaps = 63/395 (15%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY ++ F+ P
Sbjct: 211 FDPKFAFKEVEDQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSITDFLRAANPV---- 264
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+FL KS S I D
Sbjct: 265 ------------------------DFLSKS------------------------SEILLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRACCQDIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKALDISLSS 336
Query: 294 EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E +EE+ + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E++
Sbjct: 337 GEEEEGDEEESTTRQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVE 396
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
LKM L G + + + MF L IR L+ +T
Sbjct: 397 LKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 430
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ +KK E ++ D+S+ EK +R
Sbjct: 715 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTRKKAEAVVNTVDISEREKVAQLR 774
Query: 540 A 540
+
Sbjct: 775 S 775
>gi|388453901|ref|NP_001253060.1| putative rRNA methyltransferase 3 [Macaca mulatta]
gi|355568824|gb|EHH25105.1| hypothetical protein EGK_08867 [Macaca mulatta]
gi|380809448|gb|AFE76599.1| putative rRNA methyltransferase 3 [Macaca mulatta]
gi|383415675|gb|AFH31051.1| putative rRNA methyltransferase 3 [Macaca mulatta]
gi|384945206|gb|AFI36208.1| putative rRNA methyltransferase 3 [Macaca mulatta]
Length = 843
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 224/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ G+ E+ + + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEDEGDEEDSTAGITKQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-ISIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 720 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 779
Query: 540 A 540
+
Sbjct: 780 S 780
>gi|410256152|gb|JAA16043.1| FtsJ homolog 3 [Pan troglodytes]
gi|410307214|gb|JAA32207.1| FtsJ homolog 3 [Pan troglodytes]
gi|410349587|gb|JAA41397.1| FtsJ homolog 3 [Pan troglodytes]
Length = 847
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 223/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 436
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 724 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 783
Query: 540 A 540
+
Sbjct: 784 S 784
>gi|332848815|ref|XP_003315725.1| PREDICTED: pre-rRNA processing protein FTSJ3 isoform 1 [Pan
troglodytes]
Length = 847
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 223/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 436
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEK 534
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK
Sbjct: 724 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREK 778
>gi|350399404|ref|XP_003485513.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Bombus
impatiens]
Length = 852
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 2/187 (1%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR++I+RELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 91 VEDITTDKCRVSISRELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLAALKMATYFLR 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY +L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 151 PGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQASRAESAEIFVVCQYYIAPDKLDPK 210
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K K GYP + LY L V FI HE
Sbjct: 211 FLDPKYVFSELEIEPTNKLNVYNPAK-KKDKVEGYPENDYTLYHKLSVKDFIAHENAVEA 269
Query: 180 LQHATEV 186
LQ+A+E+
Sbjct: 270 LQNASEI 276
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLK 247
GYRSRAAFKLIQ+NRKFEFLQKS+VC+DLCAAPGGWMQ+A+QNM SS II D +
Sbjct: 24 GYRSRAAFKLIQMNRKFEFLQKSRVCIDLCAAPGGWMQIARQNMPVSSVIIGVDLFPIKP 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P +++ D R + LK WK VLHD
Sbjct: 84 IPGCISLVEDITTD---KCRVSISRELKTWKADVVLHD 118
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 53/62 (85%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV+EY+K+ ++NVRPI+KV+EAK+RKK+R R+++K KKK+ET+M+ D+SD EKA+ +
Sbjct: 708 LVDEYKKRVEDLNVRPIKKVIEAKSRKKRRALRKLEKAKKKVETIMDNTDISDREKAKQV 767
Query: 539 RA 540
+A
Sbjct: 768 QA 769
>gi|350399407|ref|XP_003485514.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Bombus
impatiens]
Length = 823
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 2/187 (1%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTDKCR++I+RELKTWK DVVLHDG+PNVG NW++DAY Q LTL ALK+A+ L+
Sbjct: 91 VEDITTDKCRVSISRELKTWKADVVLHDGAPNVGKNWLHDAYQQIVLTLAALKMATYFLR 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWF+TKVFRSKDY +L+W+ KQLF++VH+TKPQASR ESAEIFVVCQ+YIAP KLD K
Sbjct: 151 PGGWFITKVFRSKDYNALVWVLKQLFRKVHATKPQASRAESAEIFVVCQYYIAPDKLDPK 210
Query: 121 FFDPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPKY F EL E KLN + +K K GYP + LY L V FI HE
Sbjct: 211 FLDPKYVFSELEIEPTNKLNVYNPAK-KKDKVEGYPENDYTLYHKLSVKDFIAHENAVEA 269
Query: 180 LQHATEV 186
LQ+A+E+
Sbjct: 270 LQNASEI 276
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLK 247
GYRSRAAFKLIQ+NRKFEFLQKS+VC+DLCAAPGGWMQ+A+QNM SS II D +
Sbjct: 24 GYRSRAAFKLIQMNRKFEFLQKSRVCIDLCAAPGGWMQIARQNMPVSSVIIGVDLFPIKP 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P +++ D R + LK WK VLHD
Sbjct: 84 IPGCISLVEDITTD---KCRVSISRELKTWKADVVLHD 118
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 53/62 (85%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
LV+EY+K+ ++NVRPI+KV+EAK+RKK+R R+++K KKK+ET+M+ D+SD EKA+ +
Sbjct: 679 LVDEYKKRVEDLNVRPIKKVIEAKSRKKRRALRKLEKAKKKVETIMDNTDISDREKAKQV 738
Query: 539 RA 540
+A
Sbjct: 739 QA 740
>gi|397480218|ref|XP_003811384.1| PREDICTED: putative rRNA methyltransferase 3 [Pan paniscus]
Length = 846
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 223/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTITELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 723 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 782
Query: 540 A 540
+
Sbjct: 783 S 783
>gi|403303760|ref|XP_003942491.1| PREDICTED: putative rRNA methyltransferase 3 [Saimiri boliviensis
boliviensis]
Length = 839
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 224/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVD+VL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDIVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYLRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ G+ E+ + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEQLNRTLAEIKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 398 SDEEHIDIVPKKIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDEND-VEKKLVEEEFD 456
SD++ +IVP I+ V+ LD GL SS + + D ++ F+
Sbjct: 636 SDDDGFEIVP--IEDPVKHRILDPEGLAL------GAVIASSKKAKRDLIDNSFNRYTFN 687
Query: 457 TDEEDGLGKLLRYW---EKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARKKK 507
DE G+L ++ EK + L V YRK+ EIN RPI+KV EAKARKK+
Sbjct: 688 EDE----GELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKVAEAKARKKR 743
Query: 508 RQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
R +++++ +KK E ++ D+S+ EK +R+
Sbjct: 744 RMLKKLEQTRKKAEAVVNTVDISEREKVAQLRS 776
>gi|426347139|ref|XP_004041216.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Gorilla gorilla
gorilla]
Length = 847
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 223/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 724 VEYYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 783
Query: 540 A 540
+
Sbjct: 784 S 784
>gi|13384672|ref|NP_079586.1| pre-rRNA processing protein FTSJ3 [Mus musculus]
gi|73621844|sp|Q9DBE9.1|RRMJ3_MOUSE RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|12836606|dbj|BAB23730.1| unnamed protein product [Mus musculus]
gi|74211447|dbj|BAE26467.1| unnamed protein product [Mus musculus]
gi|148702334|gb|EDL34281.1| FtsJ homolog 3 (E. coli) [Mus musculus]
Length = 838
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 223/399 (55%), Gaps = 67/399 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF RV +TKPQASR ESAEIFVVCQ ++AP K+D KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDAKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ----EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
EG E E + + +EEE+E + + + E+K +E ELKRKKKK+ +E+ K +
Sbjct: 337 EEEEEGDEEEAVAETKQAPEEEEEREEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQR 396
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
E++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 ERVELKMDLPG-VSIADEGETGMFSLRTIRGQQLLEEVT 434
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 26/155 (16%)
Query: 398 SDEEHIDIVPKK--IKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEF 455
+DE+ ++VP + +KY + LD GL SS + + D L++ F
Sbjct: 635 ADEDGFEVVPIQDPVKYRI----LDPEGLAL------GAVIASSKKAKRD----LIDNSF 680
Query: 456 D----TDEEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARK 505
+ +EE L + EK + L V YRK+ EIN RPI+KV EAKARK
Sbjct: 681 NRYAFNEEEGELPEWFAQEEKQHRIRQLPVDKKEVEHYRKRWREINARPIKKVAEAKARK 740
Query: 506 KKRQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
K+R +++++ KKK E ++ D+S+ EK +R+
Sbjct: 741 KRRVLKKLEQTKKKAEAVVNTVDISEREKVAQLRS 775
>gi|23331072|gb|AAH36710.1| FtsJ homolog 3 (E. coli) [Homo sapiens]
gi|123983012|gb|ABM83247.1| FtsJ homolog 3 (E. coli) [synthetic construct]
gi|123997695|gb|ABM86449.1| FtsJ homolog 3 (E. coli) [synthetic construct]
gi|189054652|dbj|BAG37502.1| unnamed protein product [Homo sapiens]
gi|307685131|dbj|BAJ20496.1| FtsJ homolog 3 [synthetic construct]
Length = 847
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 223/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLCTIRGHQLLEEVT 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 724 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 783
Query: 540 A 540
+
Sbjct: 784 S 784
>gi|410209886|gb|JAA02162.1| FtsJ homolog 3 [Pan troglodytes]
gi|410256150|gb|JAA16042.1| FtsJ homolog 3 [Pan troglodytes]
Length = 847
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 223/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
DE + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 436
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 724 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 783
Query: 540 A 540
+
Sbjct: 784 S 784
>gi|296476235|tpg|DAA18350.1| TPA: putative rRNA methyltransferase 3 [Bos taurus]
Length = 809
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 223/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +W +DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWAHDAYSQAHLTLMALRLACDFLGR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E GE EE + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEGEEEEAAAGTGPQPSQEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 711 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 770
Query: 540 A 540
+
Sbjct: 771 S 771
>gi|115496334|ref|NP_001068830.1| pre-rRNA processing protein FTSJ3 [Bos taurus]
gi|109659216|gb|AAI18407.1| FtsJ homolog 3 (E. coli) [Bos taurus]
Length = 834
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 223/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +W +DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWAHDAYSQAHLTLMALRLACDFLGR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E GE EE + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEGEEEEAAAGTGPQPSQEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 711 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 770
Query: 540 A 540
+
Sbjct: 771 S 771
>gi|402900732|ref|XP_003913322.1| PREDICTED: putative rRNA methyltransferase 3 [Papio anubis]
Length = 844
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 224/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVELQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ G+ E+ + + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEDEGDEEDSTAGITKQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 721 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 780
Query: 540 A 540
+
Sbjct: 781 S 781
>gi|320170532|gb|EFW47431.1| FtsJ cell division protein [Capsaspora owczarzaki ATCC 30864]
Length = 1045
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 227/452 (50%), Gaps = 94/452 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITTDKCR AI +E K WKVD VLHDG+PNVG +W DAY Q L L +LK+A L +
Sbjct: 91 EDITTDKCRAAIRKETKGWKVDCVLHDGAPNVGTSWTQDAYTQAALVLMSLKIACEHLGQ 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGW++TKVFRS DY +L+W+F+Q F++VH+TKPQASR ESAEIFVVCQ Y P K+D +
Sbjct: 151 GGWYITKVFRSADYNALVWVFQQFFKKVHATKPQASRNESAEIFVVCQGYNKPDKIDPRM 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPKY F E+ A ++ + K +K+KA+GYP ++ L F+ + P L
Sbjct: 211 FDPKYIFSEVEAPAKPVDLMSDKPAKKAKAVGYPDGDAGFHRQLSAQTFVLCDEPITFLA 270
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A +++ D +P G V K+ + SI
Sbjct: 271 QA---------------------------ARIVFD--DSP-GIDPVTKRPL--PSIY--- 295
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
L H TT EI+ CC DIRVLG+ +V+NLL+W ++ E EK G ++
Sbjct: 296 ----LTHRETTDEIKACCADIRVLGKSEVKNLLRWRLLMR----EYSDALEKLSGGKKKA 347
Query: 302 EKVVEDEMDEEEKELMKATKEIE------------------------------------- 324
DE E L +A E+E
Sbjct: 348 ALAAADE--SPETALKRARSEMEGSDDDDGDDGSENSDDEESEDSSEDSEEDTDDENAME 405
Query: 325 -ELKDEERREL---KRKKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRT 380
E+ D E+ L KR ++K K+R K++E++NLKM L D+ DD +F L+ I +
Sbjct: 406 TEVSDLEKAALAERKRLRRKAYKKRIKMRERLNLKMDLPDDVHDIARDD-TLFDLNTIHS 464
Query: 381 TDQLDLITAS------KPEVFADSDEEHIDIV 406
+ L + A+ PE+ + E H DIV
Sbjct: 465 ANALKRVAAADVNSLNTPELLNVASESH-DIV 495
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLNRK+ FL S+V +DLCAAPGGW+QVA ++M SS+I D +K
Sbjct: 23 GYRSRAAFKLIQLNRKYNFLGTSRVLLDLCAAPGGWLQVASKHMPVSSVIIGVDRVQIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + E + R +R K WK VLHD
Sbjct: 83 IHNVICLTEDITTDKC--RAAIRKETKGWKVDCVLHD 117
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EYR++ ++N PI+KV EAKARK+ R R + K K+K + + +APD+++A+KAR I
Sbjct: 926 MVREYRQRLRDLNATPIKKVAEAKARKRMRLERNVTKAKQKAQAINDAPDLTEAQKARQI 985
>gi|348560345|ref|XP_003465974.1| PREDICTED: putative rRNA methyltransferase 3-like [Cavia porcellus]
Length = 838
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 224/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
D+ + +HP+TT +IQ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DKELAQHPATTEDIQACCQDIKVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
EG E EE + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEGDEEEESTTETTRQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L I+ L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIQGHQLLEEVT 433
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 715 VEHYRKRWKEINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 774
Query: 540 A 540
+
Sbjct: 775 S 775
>gi|410981500|ref|XP_003997106.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Felis catus]
Length = 834
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 222/398 (55%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALKKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEIEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ILLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +++ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDVRACCQDIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKAMDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E EE + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEEADEESTAGTVRQPSKEEEEEEQLDRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ ++ LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALKKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 398 SDEEHIDIVPKKIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFD- 456
SDE+ +IVP I+ +++ LD GL SS + + D L+++ F
Sbjct: 631 SDEDGFEIVP--IEDPMKRRILDPEGLAL------GAIIASSKKAKRD----LIDDSFSR 678
Query: 457 ---TDEEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARKKK 507
+EE L + EK + L V YR++ EIN RPI+KV EAKARKK+
Sbjct: 679 YTFNEEEGELPEWFVQEEKQHRVRQLPIDKKEVEHYRRRWREINARPIKKVAEAKARKKR 738
Query: 508 RQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
R +++++ KKK E ++ D+S+ EK +R+
Sbjct: 739 RMLKKLEQTKKKAEAVVNTVDISEREKVAQLRS 771
>gi|344285249|ref|XP_003414375.1| PREDICTED: putative rRNA methyltransferase 3-like [Loxodonta
africana]
Length = 843
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 244/448 (54%), Gaps = 77/448 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDFTLYHRASVTDFLRAANPV---- 264
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+FL K+ S I D
Sbjct: 265 ------------------------DFLSKT------------------------SEISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
D+ +++HP+TT +++ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DDELVRHPATTEDVRACCQDIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKALDISLSS 336
Query: 294 -EGGEGEEEEKVVEDEMDEEEK---ELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
E E EE+ M + K E + + + E+K +E ELKRKKKK+ +E+ K +
Sbjct: 337 GEEEEEGNEEESTAGTMRQSSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQR 396
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKK 409
E++ LKM L G + + + MF L IR QL A AD+ + +P+
Sbjct: 397 ERVELKMDLPG-VSIADEGETGMFSLRSIR-GHQLLAEVAQGDMSAADT---FLSDLPRD 451
Query: 410 IKYNVEKSELDDSGLYYKNPDDSDLEFE 437
Y + E +D+ L DSDL+ E
Sbjct: 452 DIYVSDAEEDEDASL------DSDLDSE 473
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 720 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 779
Query: 540 A 540
+
Sbjct: 780 S 780
>gi|90082607|dbj|BAE90485.1| unnamed protein product [Macaca fascicularis]
Length = 540
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 223/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLDDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DIRVLGRK++R LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIRVLGRKELRLLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ G+ E+ + + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEDEGDEEDSTAGITKQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-ISIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
>gi|426238257|ref|XP_004013071.1| PREDICTED: pre-rRNA processing protein FTSJ3 [Ovis aries]
Length = 833
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 223/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +W +DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWAHDAYSQAHLTLMALRLACDFLGR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
D+ + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE K
Sbjct: 277 DDELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKERAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E GE EE ++ +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEGEEEESAAGTGPQLSQEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 710 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 769
Query: 540 A 540
+
Sbjct: 770 S 770
>gi|71896315|ref|NP_001026096.1| pre-rRNA processing protein FTSJ3 [Gallus gallus]
gi|53130786|emb|CAG31722.1| hypothetical protein RCJMB04_10b6 [Gallus gallus]
Length = 767
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 168/293 (57%), Gaps = 54/293 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG +WV+DAY Q LTL ALKLA L +
Sbjct: 26 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCK 85
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRS+DY LLWIF+Q F +V +TKPQASR ESAEIFVVCQ Y AP K+D+KF
Sbjct: 86 GGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKF 145
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPKYAFKE+ ++ L K+ K KA GY LY + F++ P L
Sbjct: 146 FDPKYAFKEVEVHAKSVSELVSKK--KPKAEGYADGDTTLYHRFTLMDFLKAPNPVDFLS 203
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A E+ G
Sbjct: 204 KANEITLG---------------------------------------------------- 211
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
D + H STT E+++CCKDIRVLGRK++R LL W L T+K KE+ KE
Sbjct: 212 DGELENHSSTTEELRQCCKDIRVLGRKELRALLNWRTKLRRFLTKKLKEQAKE 264
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V EYR++ +IN RPI+KV EAKARKK+R ++M++MKKK E ++ D+S+ EK +R
Sbjct: 646 VEEYRQRWRQINARPIKKVAEAKARKKRRMLKKMEQMKKKAEAVVSTVDISEREKVAQLR 705
>gi|73621842|sp|Q5ZKM1.2|RRMJ3_CHICK RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
Length = 832
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 168/293 (57%), Gaps = 54/293 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG +WV+DAY Q LTL ALKLA L +
Sbjct: 91 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRS+DY LLWIF+Q F +V +TKPQASR ESAEIFVVCQ Y AP K+D+KF
Sbjct: 151 GGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPKYAFKE+ ++ L K+ K KA GY LY + F++ P L
Sbjct: 211 FDPKYAFKEVEVHAKSVSELVSKK--KPKAEGYADGDTTLYHRFTLMDFLKAPNPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A E+ G
Sbjct: 269 KANEITLG---------------------------------------------------- 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
D + H STT E+++CCKDIRVLGRK++R LL W L T+K KE+ KE
Sbjct: 277 DGELENHSSTTEELRQCCKDIRVLGRKELRALLNWRTKLRRFLTKKLKEQAKE 329
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSR+AFKL+QLNRKF+FLQK++ +DLCAAPGGW+QVA + M SS++ D +K
Sbjct: 23 GFRSRSAFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLVIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWKV 279
V +QE DI R+ +R L+ WKV
Sbjct: 83 IPNVVTLQE---DITTEKCRQALRKELQTWKV 111
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V EYR++ +IN RPI+KV EAKARKK+R ++M++MKKK E ++ D+S+ EK +R
Sbjct: 711 VEEYRQRWRQINARPIKKVAEAKARKKRRMLKKMEQMKKKAEAVVSTVDISEREKVAQLR 770
>gi|440890861|gb|ELR44944.1| Putative rRNA methyltransferase 3 [Bos grunniens mutus]
Length = 833
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 223/398 (56%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +W +DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWAHDAYSQAHLTLMALRLACDFLGR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY ++ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSITDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E GE EE + +EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEGEEEEAAARTGPQPSQEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 710 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 769
Query: 540 A 540
+
Sbjct: 770 S 770
>gi|15126717|gb|AAH12281.1| Ftsj3 protein [Mus musculus]
Length = 838
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 223/399 (55%), Gaps = 67/399 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF RV +TKPQASR ESAEIFVVCQ ++AP K+D KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDAKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L ++ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTRK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
DE + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ----EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
EG E E + + +EEE+E + + + E+K +E ELKRKKKK+ +E+ K +
Sbjct: 337 EEEEEGDEEEAVAETKQAPEEEEEREEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQR 396
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
E++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 ERVELKMDLPG-VSIADEGETGMFSLRTIRGQQLLEEVT 434
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 26/156 (16%)
Query: 398 SDEEHIDIVPKK--IKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEF 455
+DE+ ++VP + +KY + LD GL SS + + D L++ F
Sbjct: 635 ADEDGFEVVPIQDPVKYRI----LDPEGLAL------GAVIASSKKAKRD----LIDNSF 680
Query: 456 D----TDEEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARK 505
+ +EE L + EK + L V YRK+ EIN RPI+KV EAKARK
Sbjct: 681 NRYAFNEEEGELPEWFAQEEKQHRIRQLPVDKKEVEHYRKRWREINARPIKKVAEAKARK 740
Query: 506 KKRQARRMDKMKKKLETLMEAPDVSDAEKARNIRAP 541
K+R +++++ KKK E ++ D+S+ EK + +P
Sbjct: 741 KRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLASP 776
>gi|58865606|ref|NP_001012014.1| pre-rRNA processing protein FTSJ3 [Rattus norvegicus]
gi|73621846|sp|Q5RJT2.1|RRMJ3_RAT RecName: Full=pre-rRNA processing protein FTSJ3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=Putative rRNA
methyltransferase 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|55778366|gb|AAH86512.1| FtsJ homolog 3 (E. coli) [Rattus norvegicus]
Length = 829
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/477 (37%), Positives = 250/477 (52%), Gaps = 71/477 (14%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF RV +TKPQASR ESAEIFVVCQ ++AP K+D KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDAKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E+ D
Sbjct: 269 KASEIS----------------------------------------------------ID 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
D+ + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DKELAQHPATTEDIRACCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E E E +EE +E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 EEEGDEEESAAETKQASEEEEEREEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKI 410
++ LKM L G + + + MF L IR L+ +T ++ + + +P+
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGQQLLEEVTQGD----MNAADTFLSDLPRDD 451
Query: 411 KYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDTDEEDGLGKLL 467
Y V +E DD + D +L + D+ + + + D+ EE+G LL
Sbjct: 452 IY-VSDAEDDDDTSLESDLDPEELAGVRTHSDQKEQKSLQFAQVDDSKEEEGENPLL 507
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 707 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 766
Query: 540 A 540
+
Sbjct: 767 S 767
>gi|326933959|ref|XP_003213065.1| PREDICTED: putative rRNA methyltransferase 3-like [Meleagris
gallopavo]
Length = 811
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 217/395 (54%), Gaps = 66/395 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG +WV+DAY Q LTL ALKLA L +
Sbjct: 91 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGSSWVHDAYSQANLTLMALKLACEFLCK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRS+DY LLWIF+Q F +V +TKPQASR ESAEIFVVCQ Y AP K+D+KF
Sbjct: 151 GGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQASRNESAEIFVVCQGYQAPDKIDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPKYAFKE+ ++ L K+ K KA GY LY + F++ P L
Sbjct: 211 FDPKYAFKEVEVHAKSVSELVSKK--KPKAEGYADGDTTLYHRFTLMDFLKAPNPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A E+ G
Sbjct: 269 KANEIMLG---------------------------------------------------- 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
D + H STT E+++CCKDIRVLGRK++R LL W L T+K KE+ KE
Sbjct: 277 DGELENHSSTTEELRQCCKDIRVLGRKELRALLNWRTKLRRFLTKKLKEQAKELDINLSS 336
Query: 295 -GGEGEEEEKVVED---EMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E EE V DE KE + + E+K +E ELKRKKKK+ KE+ K +E
Sbjct: 337 GEEEEGREEGVTASPKAAADEMVKEEEEVELALAEMKAKELAELKRKKKKILKEQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLD 385
++ LKM L G + ++ D MF L I+ T L+
Sbjct: 397 RVELKMDLPG-VSIADDGDTSMFSLKTIQRTQLLN 430
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSR+AFKL+QLNRKF+FLQK++ +DLCAAPGGW+QVA + M SS++ D +K
Sbjct: 23 GFRSRSAFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLVIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWKV 279
V +QE DI R+ +R L+ WKV
Sbjct: 83 IPNVVTLQE---DITTEKCRQALRKELQTWKV 111
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 494 PIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
PI+KV EAKARKK+R ++M++MKKK E ++ D+S+ EK +R
Sbjct: 704 PIKKVAEAKARKKRRMLKKMEQMKKKAEAVVSTVDISEREKVAQLR 749
>gi|444726995|gb|ELW67505.1| Putative rRNA methyltransferase 3 [Tupaia chinensis]
Length = 833
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/398 (41%), Positives = 222/398 (55%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRATNPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E+ D
Sbjct: 269 KASEIS----------------------------------------------------LD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
+E + +HP+TT +I+ CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 EEELAQHPATTEDIRACCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 ---EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E GE EEE EE+E + + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEGEEEEESTAGTTRQPSEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L+ +T
Sbjct: 397 RIELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 433
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 710 VERYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 769
Query: 540 A 540
+
Sbjct: 770 S 770
>gi|292625927|ref|XP_002666179.1| PREDICTED: putative rRNA methyltransferase 3 isoform 1 [Danio
rerio]
Length = 838
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/399 (41%), Positives = 220/399 (55%), Gaps = 75/399 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG NW +DA+ Q LTL ALKLA L +
Sbjct: 91 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQHDAFSQANLTLMALKLACEFLAK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRSKDY L+WIF+Q F++V +TKPQASR ESAEIFVVCQ ++AP K+D KF
Sbjct: 151 GGTFITKVFRSKDYQPLMWIFQQFFKKVQATKPQASRNESAEIFVVCQGFLAPDKIDNKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY +++F++ E P L
Sbjct: 211 FDPKHAFKEVDVQVKTVKELVNKK--KPKAEGYSDGDLTLYHKFTITEFLKAENPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A E I FD
Sbjct: 269 KANE----------------------------------------------------ITFD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
D + HP T+ EI+ECC D++VLGRK++R LL W L +K ++E K+ ++
Sbjct: 277 DPLLESHPLTSAEIRECCSDVKVLGRKELRLLLSWRSKLRKFLAKKLRQEAKQ----LDQ 332
Query: 302 EKVVEDEMDEEEKELMKAT----------------KEIEELKDEERRELKRKKKKVSKER 345
E +DE + +++ K K++ ELK EE ELKRKKKK+ KER
Sbjct: 333 EASSDDEQSDTDEKESKKKKSEEKKEEEDEDEAMEKKLTELKAEEFAELKRKKKKLLKER 392
Query: 346 TKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQL 384
K +E++ LKM L G + + D MF L IR + L
Sbjct: 393 RKQRERVELKMDLPG-VSIADAGDSSMFSLGSIRKSQGL 430
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR++FKLIQLNRKF+FLQK++ VDLCAAPGGW+QVA + M SS++ D +K
Sbjct: 23 GYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVSSLVIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE + R+ +R L+ WKV
Sbjct: 83 IPNVVTLQEDITTEKC--RQALRKELQTWKV 111
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EY++K EIN RPIR+V EAKARKK+R ++M++ KKK E ++ D+S+ EK +
Sbjct: 704 MVEEYKQKWKEINARPIRRVAEAKARKKRRTLKKMEQAKKKAEAVVNTVDISEREKMAQL 763
Query: 539 RA 540
++
Sbjct: 764 KS 765
>gi|18028291|gb|AAL56015.1|AF327355_1 hypothetical protein SB92 [Homo sapiens]
Length = 847
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 222/406 (54%), Gaps = 79/406 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMVD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------- 294
D + +HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 277 DIELAQHPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 295 ------------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS 342
G ++ K E+E +EE+ + + E+K +E ELKRKKKK+
Sbjct: 337 GEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ-----LNQTLAEMKAQEVAELKRKKKKLL 391
Query: 343 KERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E+ K +E++ LKM L G + + + MF L IR L+ +T
Sbjct: 392 REQRKQRERVELKMDLPG-VSIADEGETGMFSLCTIRGHQLLEEVT 436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 724 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 783
Query: 540 A 540
+
Sbjct: 784 S 784
>gi|432853581|ref|XP_004067778.1| PREDICTED: pre-rRNA processing protein FTSJ3-like [Oryzias latipes]
Length = 857
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 223/405 (55%), Gaps = 76/405 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KC+ A+ +EL+TWKVDVVL+DG+PNVG NW +DA+ Q LTL ALKLA L +
Sbjct: 91 EDITTEKCKQALRKELQTWKVDVVLNDGAPNVGANWQHDAFSQAHLTLMALKLACEFLNK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY LLWIF+Q F++V STKPQASR ESAEIFVVCQ ++AP K+D KF
Sbjct: 151 GGTFVTKVFRSKDYQPLLWIFQQFFKKVQSTKPQASRNESAEIFVVCQGFLAPDKIDGKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L V+K KA GY LY + V+ F++ E P L
Sbjct: 211 FDPKHAFKEVEVQAKTVRDLI--TVKKPKAEGYTDGDLTLYHSFTVTSFLKAENPVDFLG 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I FD
Sbjct: 269 KASE----------------------------------------------------IKFD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ H ST+ EI+ECC+DI+VLGRK++R LL W L +K KEE K+ G +E
Sbjct: 277 SPDLESHSSTSSEIKECCRDIKVLGRKELRLLLNWRAKLRRYLAKKLKEEAKQLG---QE 333
Query: 302 EKVVEDEMDEE------------------EKELMKATKEIEELKDEERRELKRKKKKVSK 343
+ DE D ++E + K++ ELK EE EL+RKK+K+ K
Sbjct: 334 ISLSSDEEDNSEDEPEEKKEDKVEEGEDEDEEEKEMEKKLAELKAEEVAELRRKKRKLLK 393
Query: 344 ERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
ER K +E++ LKM L G + DD +F L+ I+ L IT
Sbjct: 394 ERRKQRERVALKMDLPG-VSIANTDDTSLFSLAVIKKKKVLSDIT 437
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR++FKLIQLNRKF+FLQK++ VDLCAAPGGW+QVA + M SS+I D ++
Sbjct: 23 GYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIRP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
+ V +QE + ++ +R L+ WKV
Sbjct: 83 IPSVVTLQEDITTEKC--KQALRKELQTWKV 111
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EY++K EIN RPI++V EAKARKK+R ++ ++ KKK E ++ D+S+ EK +
Sbjct: 712 MVEEYKQKWKEINARPIKRVAEAKARKKRRMLKKTEQAKKKAEAVVNTVDISEREKMAQL 771
Query: 539 RA 540
++
Sbjct: 772 KS 773
>gi|391341614|ref|XP_003745122.1| PREDICTED: putative rRNA methyltransferase 3-like [Metaseiulus
occidentalis]
Length = 788
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 221/379 (58%), Gaps = 64/379 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR A+ ELKTWK DVVL+DG+PNVG NW++DAY Q CL+L A KLAS L +G
Sbjct: 92 DITTPECRKALRTELKTWKADVVLNDGAPNVGKNWLHDAYAQICLSLHAAKLASEFLVKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRSKDY + +W+ K+LF++V +TKP+ASR ESAEIFVVCQ ++AP KLD KFF
Sbjct: 152 GWFVTKVFRSKDYNAFIWVLKKLFRKVSATKPRASRHESAEIFVVCQGFVAPDKLDDKFF 211
Query: 123 DPKYAFKEL--GAEDGKLNALKKK-QVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+PKY F+EL E N L++ ++K KA GY +Y+ +P +FI+ L
Sbjct: 212 NPKYLFEELDISQESAAKNVLERAASLKKPKAEGYKEGAK-MYETIPCMQFIKSVNFMEL 270
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L E I
Sbjct: 271 LGEVHE----------------------------------------------------IL 278
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
D E VL HP TT +I+E CKDI+VLG+ D++ L +W + LH+ + +KE GE
Sbjct: 279 LDSERVLNHPLTTDDIKEYCKDIKVLGKGDLKTLCQWRRKLHE-------QFKKEDGEEN 331
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
E+ ++D+ ++E+ E K K ++++ + +ELKR K+K ++ K ++ +NLKM++K
Sbjct: 332 VEDVEMDDDNEDEDDEETKLLKHVQQMNADALQELKRVKRKKLRQLKKTRDALNLKMIIK 391
Query: 360 GDLGPTENDDEEMFKLSQI 378
GD G + +D+++F+L +
Sbjct: 392 GDEGIVQ-EDKDIFQLKTL 409
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 17/103 (16%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLK 247
GYRSRA+FKLIQLNRKFEFLQ+++V VDLCAAPGGW+QVA++ M ASS I+ D +
Sbjct: 23 GYRSRASFKLIQLNRKFEFLQRARVLVDLCAAPGGWLQVAQKYMPASSLIVGVDLVPIRP 82
Query: 248 HPSTT-----VEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P+ + EC RK +R LK WK VL+D
Sbjct: 83 IPNVVGLTHDITTPEC--------RKALRTELKTWKADVVLND 117
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 41/51 (80%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
E+NV+ I++VVEAK+RKK+R +RMDK +KK E L + D+S+ EKA+N++
Sbjct: 669 EVNVKTIKRVVEAKSRKKRRFMKRMDKARKKAEDLCGSLDMSETEKAQNLK 719
>gi|169641976|gb|AAI60685.1| LOC431876 protein [Xenopus laevis]
Length = 852
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 222/398 (55%), Gaps = 70/398 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+ CR A+ + L+TWK DVVL+DG+PNVG NW +DA+ Q L+L AL+LA L
Sbjct: 91 EDITTEDCRQAVKKHLQTWKADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TK+FRS DY SLLWI +Q F++V+STKPQASR ESAEIFVVCQ ++AP K+DT+F
Sbjct: 151 GGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQASRSESAEIFVVCQGFLAPDKIDTRF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKK-QVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
FDPK+AFK++ DG + + + +K KA GY + LY + F+ E P
Sbjct: 211 FDPKFAFKDV---DGPVQTVSQLLSHKKPKAEGYAATSLSLYHCASLVDFLTVENPV--- 264
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+FL K+ S I
Sbjct: 265 -------------------------DFLSKT------------------------SEIAL 275
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG---- 296
DD + KHP+TT +I+ECC+DI+VLGRK++R LL W L K KE KE
Sbjct: 276 DDTELEKHPATTNDIRECCRDIKVLGRKELRLLLNWRSKLRRHLARKLKEASKESAMEII 335
Query: 297 --EGEEEEKVVEDEMDE----EEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
EEEEK +D D+ E++EL +++ E+K EE LKRKKK++ K + + +E
Sbjct: 336 LSSDEEEEKQKKDICDKDYNLEDEELH---RKLAEVKAEELTALKRKKKRILKTQRRQRE 392
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L I + L ++
Sbjct: 393 RVELKMDLPG-VSIADEGETGMFSLHTIGKNELLQTLS 429
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNRKF+FLQ+++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRKFQFLQRARALVDLCAAPGGWLQVAAKFMPVSSLIIGIDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ +QE DI R+ V+ L+ WK VL+D
Sbjct: 83 IPNVLTLQE---DITTEDCRQAVKKHLQTWKADVVLND 117
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 48/62 (77%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++ +YRK++ E+N RPI+KV EAKARKK+R ++M++MKKK E ++ D+S+ EKA +
Sbjct: 734 MMEDYRKRQRELNARPIKKVAEAKARKKRRTLKKMEQMKKKAEAVVNTSDISEREKAAQL 793
Query: 539 RA 540
R+
Sbjct: 794 RS 795
>gi|115528317|gb|AAI24923.1| LOC431876 protein [Xenopus laevis]
Length = 762
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 222/398 (55%), Gaps = 70/398 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+ CR A+ + L+TWK DVVL+DG+PNVG NW +DA+ Q L+L AL+LA L
Sbjct: 91 EDITTEDCRQAVKKHLQTWKADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TK+FRS DY SLLWI +Q F++V+STKPQASR ESAEIFVVCQ ++AP K+DT+F
Sbjct: 151 GGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQASRSESAEIFVVCQGFLAPDKIDTRF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKK-QVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
FDPK+AFK++ DG + + + +K KA GY + LY + F+ E P
Sbjct: 211 FDPKFAFKDV---DGPVQTVSQLLSHKKPKAEGYAATSLSLYHCASLVDFLTVENPV--- 264
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+FL K+ S I
Sbjct: 265 -------------------------DFLSKT------------------------SEIAL 275
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG---- 296
DD + KHP+TT +I+ECC+DI+VLGRK++R LL W L K KE KE
Sbjct: 276 DDTELEKHPATTNDIRECCRDIKVLGRKELRLLLNWRSKLRRHLARKLKEASKESAMEII 335
Query: 297 --EGEEEEKVVEDEMDE----EEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
EEEEK +D D+ E++EL +++ E+K EE LKRKKK++ K + + +E
Sbjct: 336 LSSDEEEEKQKKDICDKDYNLEDEELH---RKLAEVKAEELTALKRKKKRILKTQRRQRE 392
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L I + L ++
Sbjct: 393 RVELKMDLPG-VSIADEGETGMFSLHTIGKNELLQTLS 429
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNRKF+FLQ+++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRKFQFLQRARALVDLCAAPGGWLQVAAKFMPVSSLIIGIDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ +QE DI R+ V+ L+ WK VL+D
Sbjct: 83 IPNVLTLQE---DITTEDCRQAVKKHLQTWKADVVLND 117
>gi|348504914|ref|XP_003440006.1| PREDICTED: putative rRNA methyltransferase 3-like [Oreochromis
niloticus]
Length = 816
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 247/459 (53%), Gaps = 85/459 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG NW +DA+ Q LTL ALKLA L +
Sbjct: 91 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQHDAFSQAHLTLMALKLACEFLTK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY LLWIF+Q F++V +TKPQASR ESAEIFV+CQ ++AP K+D+KF
Sbjct: 151 GGTFVTKVFRSKDYQPLLWIFQQFFKKVQATKPQASRNESAEIFVICQGFVAPDKIDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPKYAFKE+ + + L V+K KA GY LY + V+ F++ E P L
Sbjct: 211 FDPKYAFKEVEVQAKTVKELI--PVKKPKAEGYTDGDLTLYHSFTVTDFLKAENPVDFLG 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I F+
Sbjct: 269 KASE----------------------------------------------------ITFN 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE---- 297
+ + H +T+ EI+ECC+DI+VLGRK++R LL W L +K K+E K+ +
Sbjct: 277 NPDLEFHSATSNEIKECCRDIKVLGRKELRLLLNWRSKLRRYLAKKLKDEAKQLDQEISL 336
Query: 298 ---------GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKL 348
EE K ++E + E+ E + K++ ELK EE ELKRKK+K+ KE+ K
Sbjct: 337 SSDEERSDSEEEAGKKEDEEEEGEDNEEEEMVKKLTELKAEEVAELKRKKRKLLKEQRKQ 396
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPK 408
+E++ LKM L G + +D +F L I+ K +V AD + +
Sbjct: 397 RERVELKMDLPG-VSIASTEDSSLFSLVSIK-----------KKKVLADISKGDMQTADT 444
Query: 409 KIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVE 447
+ E DD L ++ DD+D +S D+ D+E
Sbjct: 445 LV------DEDDDFHLSDEDGDDADKMSLASDLDDEDLE 477
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR++FKLIQLNRKF+FLQK++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE + R+ +R L+ WKV
Sbjct: 83 IPNVVTLQEDITTEKC--RQALRKELQTWKV 111
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EY++K EIN RPI++V EAKARKK+R ++M++ KKK E ++ D+S+ EK +
Sbjct: 670 MVEEYKQKWKEINARPIKRVAEAKARKKRRTLKKMEQAKKKAEAVVNTVDISEREKMAQL 729
Query: 539 RA 540
++
Sbjct: 730 KS 731
>gi|431908880|gb|ELK12472.1| Putative rRNA methyltransferase 3 [Pteropus alecto]
Length = 844
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 215/398 (54%), Gaps = 66/398 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALKKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+ V +TKPQASR ESAEIFVVCQ ++AP K+D KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRHVQATKPQASRHESAEIFVVCQGFLAPDKVDNKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------ISLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
DE + +HP+TT +I+ C+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 DEELAQHPATTEDIRMSCQDIKVLGRKELRSLLNWRTKLRRHVAKKLKEQAKALDISLSS 336
Query: 302 EKVVEDEMDEEEKELMKA-----------TKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ E+ +E M+ + + E+K +E ELKRKKKK+ +E+ K +E
Sbjct: 337 GEEEEEGEEESTAGTMRQPSEEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRE 396
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
++ LKM L G + + + MF L IR L +T
Sbjct: 397 RVELKMDLPG-VSIADEGETGMFSLRTIRGHQLLKEVT 433
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ ++ LK WKV
Sbjct: 83 IPNVVTLQEDITTERC--RQALKKELKTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +++++ KKK E ++ D+S+ EK +R
Sbjct: 721 VEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLR 780
Query: 540 A 540
+
Sbjct: 781 S 781
>gi|417404920|gb|JAA49193.1| Putative sam-dependent rrna methyltransferase spb1 [Desmodus
rotundus]
Length = 840
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 223/397 (56%), Gaps = 65/397 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG+F+TKVFRS+DY LLWIF+QLF+ V +TKPQASR ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGYFITKVFRSRDYQPLLWIFQQLFRHVQATKPQASRHESAEIFVVCQGFLAPDKVDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY V+ F+ P
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPV---- 264
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+FL K AS I+ D
Sbjct: 265 ------------------------DFLSK-----------------------ASEIV-LD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK-------- 293
+E + +HP+TT +I CC+DI+VLGRK++R+LL W L +K KE+ K
Sbjct: 277 EEELAQHPATTEDIWVCCQDIKVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSS 336
Query: 294 --EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
E EEE EE+E + + + E+K +E ELKRKKKK+ +E+ K +E+
Sbjct: 337 GEEEEGDEEESTAGNVRQISEEEEEEQLNRTLAEMKAQEVAELKRKKKKLLREQRKQRER 396
Query: 352 MNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+ LKM L G + + + MF L IR L+ +T
Sbjct: 397 VELKMDLPG-VSIADEGETGMFSLRTIRGHQLLEEVT 432
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ +R LK WKV
Sbjct: 83 LPNVVTLQEDITTERC--RQALRKELKTWKV 111
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 398 SDEEHIDIVPKKIKYNVEKSELDDSGLYYKNPDDSDLEFESSSEDEND-VEKKLVEEEFD 456
SD++ +IVP I+ V+ LD GL SS + + D ++ F+
Sbjct: 637 SDDDGFEIVP--IQDPVKHQILDPEGLAL------GAIIASSKKAKRDLIDNSFNRYTFN 688
Query: 457 TDEEDGLGKLLRYW---EKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARKKK 507
DE G+L ++ EK + L V YRK+ EIN RPI+KV EAKARKK+
Sbjct: 689 EDE----GELPEWFVQEEKQHRIRQLPIDKKEVEHYRKRWREINARPIKKVAEAKARKKR 744
Query: 508 RQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
R +++++ KKK E ++ D+S+ EK +R+
Sbjct: 745 RMLKKLEQTKKKAEAVVNTVDISEREKVAQLRS 777
>gi|395532979|ref|XP_003768541.1| PREDICTED: putative rRNA methyltransferase 3 [Sarcophilus harrisii]
Length = 836
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 226/390 (57%), Gaps = 71/390 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITTD+CR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTDRCRQALKKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY +LLWIF+QLF+ V +TKPQASR+ESAEIFVVCQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQALLWIFQQLFRHVQATKPQASRQESAEIFVVCQGFLAPDKIDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + ++ L K+ K KA GY LY + ++ F+ P
Sbjct: 211 FDPKFAFKEVEVQAKTVSELVTKK--KPKAEGYADGDLTLYHRVSITDFLRAANPV---- 264
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+FL K AS II D
Sbjct: 265 ------------------------DFLSK-----------------------ASEII-LD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK------EG 295
D+ + HP+T +++ C+DI+VLGRK++R+LL W L +K K++ K
Sbjct: 277 DKELELHPATNEDVKVYCQDIKVLGRKELRSLLNWRTKLRRFVAKKLKDQAKALDISLSS 336
Query: 296 GEGEEE------EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
GE EEE +K DEEE +L +A + E+K +E ELKRKKKK+ +E+ K +
Sbjct: 337 GEEEEEEEQEEGKKTTLAAKDEEE-DLDRA---LAEMKAQEVAELKRKKKKLLQEQRKQR 392
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIR 379
E++ LKM L G + ++ + MF L IR
Sbjct: 393 ERVELKMDLPG-VSIADDGETGMFSLRTIR 421
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSR+AFKLI LNR F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GFRSRSAFKLIHLNRPFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE R R+ ++ LK WKV
Sbjct: 83 IPNVVTLQEDITTDRC--RQALKKELKTWKV 111
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V EYRK+ EIN RPI+KV EAKARKK+R ++M++ K+K E ++ D+S+ EK +R
Sbjct: 712 VEEYRKRWREINARPIKKVAEAKARKKRRMLKKMEQTKRKAEAVVNTVDISEREKMAQLR 771
Query: 540 A 540
+
Sbjct: 772 S 772
>gi|126308657|ref|XP_001376931.1| PREDICTED: putative rRNA methyltransferase 3-like [Monodelphis
domestica]
Length = 839
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 222/391 (56%), Gaps = 68/391 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +ELKTWKVDVVL+DG+PNVG +WV+DAY Q LTL AL+LA L
Sbjct: 91 EDITTEKCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRS+DY LLWIF+QLF+ V +TKPQASR+ESAEIFV+CQ ++AP K+D+KF
Sbjct: 151 GGCFITKVFRSRDYQPLLWIFQQLFRHVQATKPQASRQESAEIFVICQGFLAPDKIDSKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
FDPK+AFKE+ + + L K+ K KA GY LY + ++ F+ P L
Sbjct: 211 FDPKFAFKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRVSITDFLRAANPVDFLS 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+E I D
Sbjct: 269 KASE----------------------------------------------------IMLD 276
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK----EGGE 297
D+ + +HP+T+ +I+ C+DI+VLGRK++R+LL W L +K K++ K
Sbjct: 277 DKELEQHPATSEDIKVYCQDIKVLGRKELRSLLNWRTKLRRFVAKKLKDQAKALDISLSS 336
Query: 298 GEEEEKVVEDEMDEEEKEL---------MKATKEIEELKDEERRELKRKKKKVSKERTKL 348
GEEEE+ E++ + K+ + + + E+K +E ELKRKKKK+ +E+ K
Sbjct: 337 GEEEEEKEEEQKEGRGKKTLAAAEDAEEEELDRALAEMKAQEIAELKRKKKKLLQEQRKQ 396
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKLSQIR 379
+E++ LKM L G + ++ + MF L IR
Sbjct: 397 RERVELKMDLPG-VSIADDGETGMFSLHTIR 426
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSR+AFKLIQLNR+F+FLQK++ +DLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GFRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIVGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWKV 279
V +QE + R+ +R LK WKV
Sbjct: 83 IPNVVTLQEDITTEKC--RQALRKELKTWKV 111
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 450 LVEEEFD----TDEEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVV 499
L+++ F +EE+ L + EK Y L V EYRK+ EIN RPI+KV
Sbjct: 672 LIDDSFSRYTYNEEEEDLPEWFVQEEKQYRIRPLPLDKKTVEEYRKRWREINARPIKKVA 731
Query: 500 EAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
EAKARKK+R ++M++ K+K E ++ D+S+ EK +R+
Sbjct: 732 EAKARKKRRMLKKMEQTKRKAEAVVNTVDISEREKMAQLRS 772
>gi|405968832|gb|EKC33861.1| Putative rRNA methyltransferase 3 [Crassostrea gigas]
Length = 711
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 220/387 (56%), Gaps = 63/387 (16%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
++DITTDKCR + +EL TWK DVVL+DG+PNVG NW++DA+ Q L L ALKLA+ LK
Sbjct: 90 VDDITTDKCRQDLKKELHTWKADVVLNDGAPNVGKNWLHDAFQQAQLALQALKLATEFLK 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GGWFVTKVFRSKDY SL+W+F+QLF+ VH+TKPQASR ESAEIFVVC+ ++AP K+D K
Sbjct: 150 KGGWFVTKVFRSKDYNSLMWVFQQLFKHVHATKPQASRNESAEIFVVCEKFLAPDKIDPK 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
F DPKY FK++ E L + + GYP L+ +L S+FI + LL
Sbjct: 210 FLDPKYVFKDVEEEPKTGINLIHPEKRTRQREGYPEGDYTLFHSLKASEFINSDNYLNLL 269
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q+++V +DL
Sbjct: 270 A---------------------------QRNEVILDL----------------------- 279
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
+ H TT E++EC KDI+VLG++++RN++ W K L + + E E EE
Sbjct: 280 --PEIANHKETTTELKECLKDIKVLGKREIRNVISWRKKLKADLATAKAPPESAKQEVEE 337
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
+ + E ++DE+ EL + ++ LKRK KKV +E+ KL+ KM+LKM++ G
Sbjct: 338 DSEDEEAQLDEKLAELKEEE----------QKALKRKLKKVRREKVKLRHKMDLKMVIPG 387
Query: 361 DLGPTENDDEEMFKLSQIRTTDQLDLI 387
D+ +DD +F L++I+ QLD +
Sbjct: 388 DIQDF-SDDVGLFNLNKIKNKSQLDSV 413
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQLNRKFEFLQ+++V +DLCAAPGGW+QV +N SS+I
Sbjct: 23 GYRARSAFKLIQLNRKFEFLQRARVVIDLCAAPGGWLQVVAENTPVSSVI 72
>gi|327275748|ref|XP_003222634.1| PREDICTED: putative rRNA methyltransferase 3-like [Anolis
carolinensis]
Length = 771
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 167/292 (57%), Gaps = 54/292 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D K IA+ +ELKTWKVDVVL+DG+PNVG W DA+ Q LTL ALKLA L +G
Sbjct: 2 DPNLKKKNIALRKELKTWKVDVVLNDGAPNVGARWFPDAFSQANLTLSALKLACDFLSKG 61
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF+TKVFRS+DY LLWIF+QLF++V +TKPQASR ESAEIFVVCQ Y+AP K+D+KFF
Sbjct: 62 GWFITKVFRSRDYQPLLWIFQQLFRKVQATKPQASRNESAEIFVVCQGYLAPDKIDSKFF 121
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+AFKE+ + + L ++ K KA GY VLYK ++ F++ P
Sbjct: 122 DPKFAFKEVEVQAKSVTELVSQK--KPKAEGYEDGATVLYKRCTLTDFLKAANPV----- 174
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
+FL K AS I+ D
Sbjct: 175 -----------------------DFLAK-----------------------ASEIV-LDS 187
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
E + H +TT E++ CCKDIRVLGRK++R LL W L +K K++ KE
Sbjct: 188 EELEHHSATTEEVRHCCKDIRVLGRKELRALLNWRTKLRRFLVKKLKDQAKE 239
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V EYR++ EIN RPI+KV EAKARKK+R ++ ++M+KK E+++ D+S+ EKA +R
Sbjct: 647 VEEYRQRWKEINARPIKKVAEAKARKKRRMLKKAEQMRKKAESVVNTVDISEREKAAQLR 706
Query: 540 A 540
+
Sbjct: 707 S 707
>gi|47124733|gb|AAH70677.1| LOC431876 protein, partial [Xenopus laevis]
Length = 346
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 171/308 (55%), Gaps = 61/308 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+ CR A+ + L+TWK DVVL+DG+PNVG NW +DA+ Q L+L AL+LA L
Sbjct: 91 EDITTEDCRQAVKKHLQTWKADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TK+FRS DY SLLWI +Q F++V+STKPQASR ESAEIFVVCQ ++AP K+DT+F
Sbjct: 151 GGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQASRSESAEIFVVCQGFLAPDKIDTRF 210
Query: 122 FDPKYAFKELGAEDGKLNALKK-KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
FDPK+AFK++ DG + + + +K KA GY + LY + F+ E P L
Sbjct: 211 FDPKFAFKDV---DGPVQTVSQLLSHKKPKAEGYAATSLSLYHCASLVDFLTVENPVDFL 267
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+E+
Sbjct: 268 SKTSEIA----------------------------------------------------L 275
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG---- 296
DD + KHP+TT +I+ECC+DI+VLGRK++R LL W L K KE KE
Sbjct: 276 DDTELEKHPATTNDIRECCRDIKVLGRKELRLLLNWRSKLRRHLARKLKEASKESAMEII 335
Query: 297 -EGEEEEK 303
+EEEK
Sbjct: 336 LSSDEEEK 343
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNRKF+FLQ+++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRKFQFLQRARALVDLCAAPGGWLQVAAKFMPVSSLIIGIDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +QE DI R+ V+ L+ WK VL+D
Sbjct: 83 IPNVLTLQE---DITTEDCRQAVKKHLQTWKADVVLND 117
>gi|47225726|emb|CAG08069.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 175/412 (42%), Positives = 223/412 (54%), Gaps = 90/412 (21%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR A+ +EL+TWKVDVVL+DG+PNVG NW +DA+ Q LTL ALKLA L +
Sbjct: 91 EDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQHDAFSQAHLTLMALKLACEFLTK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQH----------- 110
GG FVTKVFRSKDY L+WIF+Q F +V STKPQASR ESAEIFVVCQ
Sbjct: 151 GGTFVTKVFRSKDYQPLIWIFQQFFNKVQSTKPQASRNESAEIFVVCQGEWQSQVPISHE 210
Query: 111 ------------------YIAPAKLDTKFFDPKYAFKELGAEDGKLNALKKKQVEKSKAL 152
++AP K+D+KFFDPK+AFKE+ + + L V+K KA
Sbjct: 211 KKHFCVHFTHICIISLLGFLAPDKIDSKFFDPKHAFKEVDVQAKTVRELIP--VKKPKAE 268
Query: 153 GYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSK 212
GY L+ + PV+ F++ E P +FL K
Sbjct: 269 GYTDGDLTLFHSFPVTAFLKAENPV----------------------------DFLAK-- 298
Query: 213 VCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRN 272
AS II D++ + H STT EI+ECC+DIRVLGRK++R
Sbjct: 299 ---------------------ASEII-LDNKDLESHASTTNEIKECCRDIRVLGRKELRL 336
Query: 273 LLKWWKVLHDEKTEKEKEEEK------EGGEGEEEEKVVEDEMDEEEKELMKATKEIEEL 326
LL W L ++K K E K EE+E V +E EEE E + +++ EL
Sbjct: 337 LLSWRSKLRRYLSKKLKMEAKGLQDEINLSSDEEKEPDVREEKQEEEDEEEEMERKLAEL 396
Query: 327 KDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQI 378
K E ELKRKKKK+ KER K +E++ LKM L G + + D MF LS I
Sbjct: 397 KATEVAELKRKKKKLLKERRKQRERVALKMDLPG-VSIADGGDSSMFSLSTI 447
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR++FKLIQLNRKF+FLQK++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVSSLIIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWKV 279
V +QE DI R+ +R L+ WKV
Sbjct: 83 IPNVVTLQE---DITTEKCRQALRKELQTWKV 111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V EY++K EIN RPI++V EAKARKK+R ++M++ KKK E ++ D+S+ EK +
Sbjct: 721 MVEEYKEKWKEINARPIKRVAEAKARKKRRMLKKMEQAKKKAEAVVNTVDISEREKMAQL 780
Query: 539 RA 540
++
Sbjct: 781 KS 782
>gi|322706026|gb|EFY97608.1| AdoMet-dependent rRNA methyltransferase spb1 [Metarhizium
anisopliae ARSEF 23]
Length = 840
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 232/454 (51%), Gaps = 69/454 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR I + LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTENCRATIRQHLKTWKADTVLHDGAPNVGTAWAQDSFNQAELALQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPRFL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+Y F EL GA + +V+K K GY +LYK +P S+FI+ P +L
Sbjct: 212 DPRYVFAELTGATPNNEAKVYNPEVKKRKREGYDEGDYILYKEVPASEFIQTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q GG + +A
Sbjct: 272 SCN-------------------KLTFSQPR----------GGDIALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEEEKEGGE 297
++ K P TT EI++CC+D++VLGRKD + LLKW + EK++EE G
Sbjct: 290 --ALDKLPETTEEIRQCCQDLKVLGRKDFKLLLKWRLKARGIFGFSTKEKDQEEAAIG-- 345
Query: 298 GEEEEKVVEDE-MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
E+VVE E MDEE ++ +E++ +KD+E + KR+++K ++++ + +M L M
Sbjct: 346 ----EEVVEVESMDEE----LRLQEELQSMKDKENSKKKRERRKENEKKQREIVRMQLNM 397
Query: 357 LLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVEK 416
+ D+G M + I L +A K + + +VP + +
Sbjct: 398 VAPMDIG--------MEESGPIGEGAMFSLKSADKSGALRRLNRGKMVVVPGQTPVAAQN 449
Query: 417 SELDDSGLYYKNPDDSD-LEFESSSEDENDVEKK 449
+ G +N D+ D LE E S EN E+K
Sbjct: 450 VAEESDGGENENDDEEDFLERELDSMYENYRERK 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPMNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTENC-------RATIRQHLKTWKADTVLHD 117
>gi|341890345|gb|EGT46280.1| hypothetical protein CAEBREN_16155 [Caenorhabditis brenneri]
Length = 819
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 226/394 (57%), Gaps = 68/394 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++ R AI +ELKTW D VLHDG+PNVG+NWV+DA+ Q CLTL ALKLA+ IL++G
Sbjct: 92 DITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY+ L+ +F++LF+RVH KP ASR ESAEIFVVC+ Y P K+ ++
Sbjct: 152 GTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGPEYL 211
Query: 123 DPKYAFKELGAEDGK----LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F +G N L KQ +K+KA GY +D V++ + + FI
Sbjct: 212 DPKKVFANPDGSEGTKPNPQNLLIGKQ-KKAKAEGYDTDSLVVHATVKATDFI------- 263
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
KS +D+ ++S+I
Sbjct: 264 -------------------------------KSSAYLDILG--------------SASVI 278
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DD+ H TT E++E D++VLG +++R LL+W K + + E E++ EG
Sbjct: 279 TLDDDKWKNHEKTTDEVKEYMNDVKVLGPRELRVLLRWRKSMLE-----TIEAERKAAEG 333
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEEL----KDEERRELKRKKKKVSKERTKLQEKMNL 354
E +E +E+++ EE+ E +A EI+EL ++E+ LK+KKKK+ K + ++ ++ L
Sbjct: 334 EAQEVEIEEDLSEEQLE-DRAMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRREL 392
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
KM++ GD GP + +D+E+F+L +IR +L IT
Sbjct: 393 KMIIDGDEGP-QAEDQEVFQLKKIRKAKELAAIT 425
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFL+KS+ VDLCAAPGGWMQVA Q M SS+I D + +K
Sbjct: 23 GYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +Q DI R ++ LK W VLHD
Sbjct: 83 IKNCIALQ---GDITTNETRAAIKKELKTWSADCVLHD 117
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 483 YRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
YR++ E N RP +KV EAKARK+++ R+++ KKK E ++E + +EK R ++
Sbjct: 684 YRERMREFNARPSKKVAEAKARKQRKMQRKLESAKKKAEGILENDQMEHSEKVREMK 740
>gi|340378878|ref|XP_003387954.1| PREDICTED: putative rRNA methyltransferase 3-like [Amphimedon
queenslandica]
Length = 782
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 212/388 (54%), Gaps = 66/388 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR I +ELKTWKVD VL+DG+PNVG W+ DA+ Q LTL ALKLA+ LK G
Sbjct: 92 DITTPNCRHLIQKELKTWKVDCVLNDGAPNVGSAWIQDAFSQARLTLSALKLATDFLKPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRSKDY LL +F++LF++VH+TKPQASR ESAEIFVVCQ Y+ K D K
Sbjct: 152 GWFVTKVFRSKDYQQLLNVFQKLFKKVHATKPQASRSESAEIFVVCQEYLVKGKPDEKLL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F+E E K+ ++ KS + GYP +VL+ +LPV FI + +L
Sbjct: 212 DPKFVFEEQEPLEKPKITLQNIQKHTKSSSTGYPEGQHVLFNSLPVVDFILSDDHMSVLA 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+ +F F + S+V F+
Sbjct: 272 SS-------------------HQFVFDKTSEV--------------------------FN 286
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
KHP TT EI+E C DI+VLG K+++ L+KW + + + E++ G +G
Sbjct: 287 -----KHPLTTEEIKELCSDIKVLGLKELKVLIKWRAKMKEFLDQVSDSEDESGTKGAGS 341
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM----L 357
++EMD L + ++EL EE+ ELK + K+R K++E++ +
Sbjct: 342 ----DNEMD-----LSEVDARVKELAKEEKAELKSILRYKRKQRRKVEERLKSQQEEDDP 392
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLD 385
+ G++ T E++F L+ I+T+ QL+
Sbjct: 393 VTGEV--TSGGKEKLFSLNHIKTSSQLE 418
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR+R+AFKLIQLNRKF+FLQKS+V +DLCAAPGGW+QVA Q+M SS+I D +K
Sbjct: 23 GYRARSAFKLIQLNRKFQFLQKSRVLIDLCAAPGGWLQVASQHMPVSSLIIGVDLVSIKP 82
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWKV 279
+ IQ DI R ++ LK WKV
Sbjct: 83 IPNAITIQA---DITTPNCRHLIQKELKTWKV 111
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V+EYRK+ EIN RPI+K+ EAKARKK+R AR++ K ++K + + PDV+D EK R I
Sbjct: 659 MVDEYRKRLKEINARPIKKIAEAKARKKQRAARKLTKAREKARVICDTPDVTDQEKVRQI 718
Query: 539 RA 540
+
Sbjct: 719 KG 720
>gi|281211427|gb|EFA85591.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 830
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/405 (37%), Positives = 222/405 (54%), Gaps = 65/405 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT KCR I + LKTWKVD+ LHDG+PN+G +W+ DAY Q LTL ALKLA+ L
Sbjct: 102 EDITTQKCRTEIKKSLKTWKVDICLHDGAPNMGTSWIQDAYQQAELTLHALKLATEFLVA 161
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTKVFR DY +LLW+F QLF++V STKPQASR SAEIFVVCQ ++AP +D K
Sbjct: 162 GGWFVTKVFRGPDYNALLWVFHQLFKKVDSTKPQASRNASAEIFVVCQGFLAPKHIDPKL 221
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPKY FKE+ E K L K +++++ GY + + K V F+E +L
Sbjct: 222 LDPKYVFKEI-KEAPKHIDLGKTTTKRNRS-GYEEGITEIAKTATVKDFVEGNDHLKIL- 278
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+ +Q + S ++FD
Sbjct: 279 ------------ASVNSLQFD-------------------------------VESKMYFD 295
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
HPSTT EI+EC KDI+VLG+ D + L+KW K + + K E ++E+E + E+
Sbjct: 296 ------HPSTTTEIKECFKDIKVLGKFDFKVLIKWKKEMLEYKESLEGKKEEEAAQVEQP 349
Query: 302 EK---VVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+ + ++E+DE +L++ + E + ++ ++ + +KK+V LQ+++ L M +
Sbjct: 350 DTNRLLTQEELDENLDKLLEENQSKLEKRKKKEKKKQNEKKRV------LQQRLQLNMTI 403
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITAS--KPEVFADSDEE 401
GD + DD +F L Q DQ ++ ++ P+ DS++E
Sbjct: 404 PGD-SIDQIDDNNLFDL-QKGKDDQFEIDASADVDPDEIVDSEDE 446
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKLIQLN+K+ FL +K C+DLCAAPGGWMQVA + M S+I D ++
Sbjct: 33 QGYRSRAAFKLIQLNKKYNFLGSAKACLDLCAAPGGWMQVASKYMPVQSLIVGVDLDPIR 92
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHD 282
+ +QE + R +++ LK WKV LHD
Sbjct: 93 PIKNCIGLQEDITTQKC--RTEIKKSLKTWKVDICLHD 128
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 44/60 (73%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V E +++ EI+ RPI+K+ EAKARKK R A+R++K+K K ++++ ++S+ EK R I
Sbjct: 710 MVEEIKREIREIDSRPIKKIAEAKARKKYRTAKRLEKLKDKANSVVDNEEMSNREKTRAI 769
>gi|322699763|gb|EFY91522.1| AdoMet-dependent rRNA methyltransferase spb1 [Metarhizium acridum
CQMa 102]
Length = 840
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 212/400 (53%), Gaps = 55/400 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR I + LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTENCRATIRQHLKTWKADTVLHDGAPNVGTAWAQDSFNQAELALQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPRFL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+Y F EL GA + +V+K K GY +LYK +P S+FI+ P +L
Sbjct: 212 DPRYVFAELTGATPNNEAKVYNPEVKKRKREGYDEGDYILYKEVPASEFIQTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q GG + +A
Sbjct: 272 SCN-------------------KLTFSQPH----------GGDIALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ K P TT EI++CC+D++VLGRKD + LLKW KE ++E E
Sbjct: 290 --ALDKLPETTEEIRQCCQDLKVLGRKDFKLLLKWRLKARGIFGFSTKERDQE--EAAIA 345
Query: 302 EKVVEDE-MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
E+VVE E MDEE ++ +E++ +KD+E + KR+++K ++++ + +M L M+
Sbjct: 346 EEVVEVESMDEE----LRLQEELQSMKDKENSKKKRERRKENEKKQREIVRMQLNMVAPM 401
Query: 361 DLGPTEN---DDEEMFKLSQIRTTDQLDLITASKPEVFAD 397
D+G E+ + MF L + L + K V D
Sbjct: 402 DIGMEESGPIGEGAMFSLKSADRSGALRRLNRGKMVVVRD 441
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPVNSLIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTENC-------RATIRQHLKTWKADTVLHD 117
>gi|443716141|gb|ELU07817.1| hypothetical protein CAPTEDRAFT_103272 [Capitella teleta]
Length = 317
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 165/273 (60%), Gaps = 53/273 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+KCR + +EL+TWK DVVLHDG+PNVG NW++DA+ Q LTL AL+LA L++
Sbjct: 91 EDITTEKCRQTLRKELQTWKADVVLHDGAPNVGQNWLHDAFQQAQLTLQALRLAVEFLRK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTK+FRSKDY +LLW+F+QLF +VH+TKPQASR ESAEIFVVCQ+Y AP K+D KF
Sbjct: 151 GGWFVTKIFRSKDYNALLWVFQQLFGKVHATKPQASRNESAEIFVVCQNYKAPDKVDPKF 210
Query: 122 FDPKYAFKELGAEDGKLNAL-KKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPKY FK++ A L +L ++ +K KA GY L++ L ++ FI +
Sbjct: 211 TDPKYVFKDVEAPKKALLSLYHPEKEKKKKAEGYEDGDYTLHQKLTITDFIRADN----- 265
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Y R A A + I F
Sbjct: 266 ---------YMERLA--------------------------------------ACNEIEF 278
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNL 273
DD ++ HPSTT EI CC+DI+VLGRKD+R++
Sbjct: 279 DDAAIKAHPSTTPEILACCEDIKVLGRKDIRSV 311
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLNRKFEFL+K++VC+DLCAAPGGW+QVA Q M SS+I D +K
Sbjct: 23 GYRSRAAFKLLQLNRKFEFLEKARVCIDLCAAPGGWLQVAAQQMPVSSVIVGVDLFSIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
V QE DI R+ +R L+ WK VLHD
Sbjct: 83 IHNVVSFQE---DITTEKCRQTLRKELQTWKADVVLHD 117
>gi|347837385|emb|CCD51957.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Botryotinia fuckeliana]
Length = 824
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/425 (37%), Positives = 218/425 (51%), Gaps = 65/425 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I K+WK D VLHDG+PNVG WV D+++Q L L +LKLA+ L G
Sbjct: 92 DITTEKCRATIRTHFKSWKADTVLHDGAPNVGTAWVQDSFNQAELALQSLKLATEFLAPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVCQ + AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCQGFKAPKHLDPKFV 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP++ F EL A + +++K K GY D +K +P S+FI+ P +L
Sbjct: 212 DPRHVFAELSDPTPNNEAKVFNPEIKKRKRDGYEDDNMTQFKEIPASEFIQTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+NR F+Q P G + +A
Sbjct: 272 ------------------SMNR-LSFVQ----------PPNGDVALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ K P TT EI+ C D+RVLGRK+ RNLLKW + EK K+G + E E
Sbjct: 290 --ALDKLPETTDEIRNDCADLRVLGRKEFRNLLKWRLKVR----EKFGFATKKGAKAEPE 343
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E ++MDEE +K +E++ + ++E KR+K++ ++++ + +M L M D
Sbjct: 344 EVAEVEDMDEE----LKIQEELQAMSEKESSRKKREKRRENEKKQREIVRMQLHMTAPTD 399
Query: 362 LG---PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKK--IKYNVEK 416
+G N + MF L I + I K + +SD P+K Y E
Sbjct: 400 IGLEQAGPNGEGSMFGLKAIDKAGAANKIAKGKMAILKESD-------PRKEEGGYASED 452
Query: 417 SELDD 421
SE DD
Sbjct: 453 SESDD 457
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SS+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMPVSSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R K WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRTHFKSWKADTVLHD 117
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAK RKK + A+R++K++KK L + +++ EKA +I
Sbjct: 715 LNARPIKKVREAKDRKKFKAAQRLEKLRKKSALLADEEGMTEKEKANSI 763
>gi|260809478|ref|XP_002599532.1| hypothetical protein BRAFLDRAFT_279878 [Branchiostoma floridae]
gi|229284812|gb|EEN55544.1| hypothetical protein BRAFLDRAFT_279878 [Branchiostoma floridae]
Length = 321
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 160/276 (57%), Gaps = 52/276 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR A+ +EL TW+ D VLHDG+PNVG NW+ DA Q L L AL+LA+ +L +G
Sbjct: 92 DITTDKCRQALRKELATWQADCVLHDGAPNVGSNWLKDASEQAQLVLAALRLATEVLSKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +LLW+F+QLF+ VH+TKPQASR ESAEIFVVC+ +IAP K+D +F
Sbjct: 152 GCFVTKVFRSKDYHALLWVFQQLFKLVHATKPQASRHESAEIFVVCEGFIAPDKIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DP++AFKE+ LK + +K+KA GY L+ VS+FI ++ +L
Sbjct: 212 DPRFAFKEVDVGQTPQVNLKMLEQKKAKAEGYADGDLTLFHKANVSEFITSDSYMDMLAS 271
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
E + FDD
Sbjct: 272 KNE----------------------------------------------------LFFDD 279
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK 278
E + HP TT EI+ CC+DI++LGRKD+R LL+W K
Sbjct: 280 EKIANHPLTTSEIKLCCQDIKLLGRKDIRLLLRWRK 315
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR+R+AFKLIQLNRK+ FLQ+SKV VDLCAAPGGW+QVA + M SS++ D +K
Sbjct: 23 GYRARSAFKLIQLNRKYGFLQRSKVLVDLCAAPGGWLQVAAKYMPVSSLLVGIDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
IQ DI R+ +R L W+ VLHD
Sbjct: 83 IPNVSTIQA---DITTDKCRQALRKELATWQADCVLHD 117
>gi|345568491|gb|EGX51385.1| hypothetical protein AOL_s00054g455 [Arthrobotrys oligospora ATCC
24927]
Length = 853
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 157/410 (38%), Positives = 210/410 (51%), Gaps = 65/410 (15%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITTDKCR + + LKTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 90 VSDITTDKCRSTLRQHLKTWKADTVLHDGAPNVGTAWVQDAFTQAELALQSLKLATEFLA 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
EGG FVTK+FRSKDY SLLW+F QLF++V +TKP +SR SAEIFVVC+ Y+AP ++D K
Sbjct: 150 EGGTFVTKIFRSKDYNSLLWVFNQLFKKVEATKPPSSRNVSAEIFVVCRGYLAPKRVDPK 209
Query: 121 FFDPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DPK F+EL A + + +K K GY N+LYK +PV +FIE P L
Sbjct: 210 FLDPKTVFEELPDATPNNEAKVYNPEKKKRKRDGYEEGDNLLYKEIPVKEFIETTDPIAL 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L KF F + D+ A
Sbjct: 270 LGSMN-------------------KFTFTDTN----DIATA------------------- 287
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
++ + P TT EI++CC D+RVLGR+D + LLKW + D+ K++++E E +
Sbjct: 288 ----TITRLPETTPEIRKCCDDLRVLGRRDFKILLKWRLAIRDKFGWSAKKKKEEEEEKK 343
Query: 300 EEEKVVEDEMDEE---EKEL------MKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
EE MDEE E++L K E+ +D ER++ KE +LQ
Sbjct: 344 AEETAEITPMDEELQLEEDLKNMHEKETKKKRKEKRRDNERKQ---------KEIVRLQM 394
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
M M L + DD+ MFKL + L + K + D DE
Sbjct: 395 HMTAPMELGLEQQAGPGDDQTMFKLKTVDAAGGLKEVVKGKMNMVVDEDE 444
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
K YR+R+AFKLIQLN+K+ FLQKS+V +DLCAAPGGW+QVA +NM SS+I D S +K
Sbjct: 22 KNYRARSAFKLIQLNQKYGFLQKSRVLIDLCAAPGGWLQVAAENMPNSSLIVGVDLSPIK 81
Query: 248 H-PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P + + D R +R LK WK VLHD
Sbjct: 82 PIPKVITFVSDITTD---KCRSTLRQHLKTWKADTVLHD 117
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAK RKK + +R++K++KK LME +++ EKA+ I
Sbjct: 748 LNARPIKKVKEAKDRKKFKAHQRLEKLRKKSAMLMEEEGMTEKEKAQKI 796
>gi|154309412|ref|XP_001554040.1| hypothetical protein BC1G_07600 [Botryotinia fuckeliana B05.10]
Length = 807
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 163/453 (35%), Positives = 229/453 (50%), Gaps = 62/453 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I K+WK D VLHDG+PNVG WV D+++Q L L +LKLA+ L G
Sbjct: 92 DITTEKCRATIRTHFKSWKADTVLHDGAPNVGTAWVQDSFNQAELALQSLKLATEFLAPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVCQ + AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCQGFKAPKHLDPKFV 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP++ F EL A + +++K K GY D +K +P S+FI+ P +L
Sbjct: 212 DPRHVFAELSDPTPNNEAKVFNPEIKKRKRDGYEDDNMTQFKEIPASEFIQTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+NR F+Q V L A
Sbjct: 272 ------------------SMNR-LSFVQPPNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI+ C D+RVLGRK+ RNLLKW + EK K+G + E E
Sbjct: 291 ---LDKLPETTDEIRNDCADLRVLGRKEFRNLLKWRLKVR----EKFGFATKKGAKAEPE 343
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E ++MDEE +K +E++ + ++E KR+K++ ++++ + +M L M D
Sbjct: 344 EVAEVEDMDEE----LKIQEELQAMSEKESSRKKREKRRENEKKQREIVRMQLHMTAPTD 399
Query: 362 LG---PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSD---EEHIDIVPKKIKYNVE 415
+G N + MF L I + I K + +SD EE ++ Y +
Sbjct: 400 IGLEQAGPNGEGSMFGLKAIDKAGAANKIAKGKMAILKESDPRKEEGGELDSMYEMYQEQ 459
Query: 416 KSELDD---SGLYYKNPDDSDLEFESSSEDEND 445
KS D + K +D D E S++E+++D
Sbjct: 460 KSSADAKFRAKKARKEHEDGDWEGFSAAEEQSD 492
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SS+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMPVSSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R K WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRTHFKSWKADTVLHD 117
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAK RKK + A+R++K++KK L + +++ EKA +I
Sbjct: 698 LNARPIKKVREAKDRKKFKAAQRLEKLRKKSALLADEEGMTEKEKANSI 746
>gi|358389904|gb|EHK27496.1| hypothetical protein TRIVIDRAFT_63244 [Trichoderma virens Gv29-8]
Length = 823
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 216/424 (50%), Gaps = 57/424 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG W D+++Q L L +LKLA+ L EG
Sbjct: 92 DITTDKCRATIRQHFKTWKADAVLHDGAPNVGTAWAQDSFNQAELALHSLKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ Y AP +D +
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKHIDPRLL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
D + F EL GA + +V+K K GY + +K + S FI+ P +L
Sbjct: 212 DARSVFAELSGATPNNEAKVYNPEVKKRKRDGYEDGEYIQFKEIAASSFIQTNDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q AP G + +A
Sbjct: 272 SYN-------------------KLSFAQ----------APNGDIALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ K P TT EI+ECC D++VLGRK+ + LLKW + + +K K E E
Sbjct: 290 --ALDKLPETTAEIRECCADLKVLGRKEFKLLLKWRLRVREIFGLSQK---KSAATTEAE 344
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E V + MDEE ++ +E++ LKD E + KR+++K ++++ K +M L M+ D
Sbjct: 345 EVVGVESMDEE----LRIQEELQALKDTENAKRKRERRKENEQKRKEIIRMQLNMMAPMD 400
Query: 362 LGPTEN---DDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHI--DIVPKKIKYNVEK 416
+G E+ + MF L I T ++ + K V + + + DI + ++ + E+
Sbjct: 401 IGMEESGPLGEGAMFSLKTIDKTGGMNRFSRGKMAVSNSKEPKDLEEDISTEPVESDSEE 460
Query: 417 SELD 420
LD
Sbjct: 461 DHLD 464
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+R+AFKL+QLN+K+ FL+KSKV +DLCAAPGGW+QVA + M +S+I D + +K
Sbjct: 22 KGYRARSAFKLVQLNKKYGFLEKSKVLLDLCAAPGGWLQVAAETMPVNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 PIPRVITFQSDITTDKC--RATIRQHFKTWKADAVLHD 117
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 478 SLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARN 537
+ N ++K N RPI+KV EAKARKK + A++++K+KKK + L +++ EKA +
Sbjct: 702 AAANAIKEKLRAFNARPIKKVREAKARKKFKTAQKLEKLKKKSDMLAADEGMTEKEKAES 761
Query: 538 I 538
I
Sbjct: 762 I 762
>gi|115387475|ref|XP_001211243.1| AdoMet-dependent rRNA methyltransferase spb-1 [Aspergillus terreus
NIH2624]
gi|114195327|gb|EAU37027.1| AdoMet-dependent rRNA methyltransferase spb-1 [Aspergillus terreus
NIH2624]
Length = 806
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 210/401 (52%), Gaps = 69/401 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRATIRSHLKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNALLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKHLDPKFL 211
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY YK +PV++FI P
Sbjct: 212 DPKHVFAELADPTPNNEARVFNPEKKKR----KREGYEEGDWTQYKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ + PGG + +A + +
Sbjct: 268 AIL--------GQYNKLSFQQL---------------------PGGDIALATLDRLE--- 295
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT EI++CC+D++VLG+K+ RNLL+W + EK K+GG+
Sbjct: 296 ------------ETTPEIRQCCEDLKVLGKKEFRNLLRWRLKVR----EKFGLVVKKGGQ 339
Query: 298 G--EEEEKVVE-----DEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+E E+V E DE+ +E+ KE +K E R+E +RK+K++ + + +
Sbjct: 340 AKKDEPEEVAEIAPMDDELAIQEELYRLKEKESSRMKKERRKENERKRKEIVRMQMHMTT 399
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
M++ M G LG +E F L ++ D I + K
Sbjct: 400 PMDIGMEQVGPLG-----EESTFSLKRVDREGARDAIASGK 435
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 63/103 (61%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAQSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R+ LK WK VLHD
Sbjct: 82 PIPRVISFQSDITTEKC-------RATIRSHLKTWKADTVLHD 117
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 696 INARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDETMSERDKSQAI 744
>gi|71987561|ref|NP_001022635.1| Protein H06I04.3, isoform c [Caenorhabditis elegans]
gi|351063962|emb|CCD72253.1| Protein H06I04.3, isoform c [Caenorhabditis elegans]
Length = 786
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 222/394 (56%), Gaps = 68/394 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++ R AI +ELKTW D VLHDG+PNVG+NWV+DA+ Q CLTL ALKLA+ IL++G
Sbjct: 92 DITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY+ L+ +F++LF+RVH KP ASR ESAEIFVVC+ Y P K+ ++
Sbjct: 152 GTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYL 211
Query: 123 DPKYAFKELGAEDGK----LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F +G N L KQ +K+KA GY +D ++ + + FI+
Sbjct: 212 DPKKVFANPDGSEGTKPNPQNLLIGKQ-KKAKAEGYDTDSLAIHSTINATDFIKS----- 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G++ + + +++I
Sbjct: 266 -------------------------------------------SGYLDI----LGTANVI 278
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DDE H TT E+ E D++VLG +++R LL+W K + + E+ K E E E
Sbjct: 279 TLDDEKWKNHEKTTEEVIEYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEV 338
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEEL----KDEERRELKRKKKKVSKERTKLQEKMNL 354
E EE + E+++++ +A EI+EL ++E+ LK+KKKK+ K + ++ ++ L
Sbjct: 339 EIEENLTEEQLED------RAMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRREL 392
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
KM++ GD GP + +D+E+F+L +IR +L IT
Sbjct: 393 KMIIDGDEGP-QAEDQEVFQLKKIRKAKELAEIT 425
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFL+KS+ VDLCAAPGGWMQVA Q M SS+I D + +K
Sbjct: 23 GYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +Q DI R ++ LK W VLHD
Sbjct: 83 IKNCIALQ---GDITTNETRAAIKKELKTWSADCVLHD 117
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 483 YRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
YR++ E N RP +KV EAKARK+K+ R+++ KKK E ++E + +EK R ++
Sbjct: 691 YRERMREFNARPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQMEHSEKVREMK 747
>gi|17553860|ref|NP_497655.1| Protein H06I04.3, isoform a [Caenorhabditis elegans]
gi|351063960|emb|CCD72251.1| Protein H06I04.3, isoform a [Caenorhabditis elegans]
Length = 833
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 222/394 (56%), Gaps = 68/394 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++ R AI +ELKTW D VLHDG+PNVG+NWV+DA+ Q CLTL ALKLA+ IL++G
Sbjct: 92 DITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY+ L+ +F++LF+RVH KP ASR ESAEIFVVC+ Y P K+ ++
Sbjct: 152 GTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYL 211
Query: 123 DPKYAFKELGAEDGK----LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F +G N L KQ +K+KA GY +D ++ + + FI+
Sbjct: 212 DPKKVFANPDGSEGTKPNPQNLLIGKQ-KKAKAEGYDTDSLAIHSTINATDFIKS----- 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G++ + + +++I
Sbjct: 266 -------------------------------------------SGYLDI----LGTANVI 278
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DDE H TT E+ E D++VLG +++R LL+W K + + E+ K E E E
Sbjct: 279 TLDDEKWKNHEKTTEEVIEYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEV 338
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEEL----KDEERRELKRKKKKVSKERTKLQEKMNL 354
E EE + E+++++ +A EI+EL ++E+ LK+KKKK+ K + ++ ++ L
Sbjct: 339 EIEENLTEEQLED------RAMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRREL 392
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
KM++ GD GP + +D+E+F+L +IR +L IT
Sbjct: 393 KMIIDGDEGP-QAEDQEVFQLKKIRKAKELAEIT 425
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFL+KS+ VDLCAAPGGWMQVA Q M SS+I D + +K
Sbjct: 23 GYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +Q DI R ++ LK W VLHD
Sbjct: 83 IKNCIALQ---GDITTNETRAAIKKELKTWSADCVLHD 117
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 469 YWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPD 528
Y++++ V YR++ E N RP +KV EAKARK+K+ R+++ KKK E ++E
Sbjct: 677 YFKQTPVTKEQVALYRERMREFNARPSKKVAEAKARKQKKMQRKLESAKKKAEGILENDQ 736
Query: 529 VSDAEKARNIR 539
+ +EK R ++
Sbjct: 737 MEHSEKVREMK 747
>gi|330840582|ref|XP_003292292.1| hypothetical protein DICPUDRAFT_57851 [Dictyostelium purpureum]
gi|325077462|gb|EGC31172.1| hypothetical protein DICPUDRAFT_57851 [Dictyostelium purpureum]
Length = 817
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 162/283 (57%), Gaps = 51/283 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT KCR I + LKTWKVDV LHDG+PN+G +WV DAY Q LTL ALKLA+ L
Sbjct: 92 EDITTQKCRTEIKKALKTWKVDVCLHDGAPNMGTSWVQDAYQQAELTLHALKLATEFLAT 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTKVFR DY SL+W+F +LF++V STKPQASR SAEIFVVCQ ++ P K+D K
Sbjct: 152 GGWFVTKVFRGADYNSLIWVFNKLFRKVESTKPQASRNASAEIFVVCQGFLNPKKIDPKL 211
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ FKE+ K++ L +K+ +++++ GY V +L K +S FIE + L
Sbjct: 212 LDPKFVFKEVQEGPKKVDVLSEKKAKRNRS-GYEDGVTMLRKKGFISDFIESSQHLLDLA 270
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
TE +EF + + Q+ KQ
Sbjct: 271 SFTE-------------------YEFDENA--------------QIFKQ----------- 286
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEK 284
HPSTT EI EC +D+RVLG+ D ++KW K + + K
Sbjct: 287 ------HPSTTPEIIECFRDLRVLGKNDFSKIIKWRKAMAEYK 323
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL +K C+DLCAAPGGWMQVA + M S+I D ++
Sbjct: 23 QGYRSRAAFKLVQLNKKYNFLGSAKACLDLCAAPGGWMQVASKYMPVQSLIVGVDLVPIR 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHD 282
+ + E + R +++ LK WKV LHD
Sbjct: 83 QVRNCISLAEDITTQKC--RTEIKKALKTWKVDVCLHD 118
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 46/60 (76%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V+E ++K EI+ RPI+K+ EAKARKK R ++M+K+K+K ++M+ D+S+ EK+R I
Sbjct: 690 MVDEIKRKIKEIDSRPIKKIAEAKARKKMRLGKKMEKVKEKSSSIMDNADMSNKEKSRAI 749
>gi|71987550|ref|NP_497656.2| Protein H06I04.3, isoform b [Caenorhabditis elegans]
gi|351063961|emb|CCD72252.1| Protein H06I04.3, isoform b [Caenorhabditis elegans]
Length = 716
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 222/394 (56%), Gaps = 68/394 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++ R AI +ELKTW D VLHDG+PNVG+NWV+DA+ Q CLTL ALKLA+ IL++G
Sbjct: 92 DITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY+ L+ +F++LF+RVH KP ASR ESAEIFVVC+ Y P K+ ++
Sbjct: 152 GTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPDKVGAEYL 211
Query: 123 DPKYAFKELGAEDGK----LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F +G N L KQ +K+KA GY +D ++ + + FI+
Sbjct: 212 DPKKVFANPDGSEGTKPNPQNLLIGKQ-KKAKAEGYDTDSLAIHSTINATDFIKS----- 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G++ + + +++I
Sbjct: 266 -------------------------------------------SGYLDI----LGTANVI 278
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DDE H TT E+ E D++VLG +++R LL+W K + + E+ K E E E
Sbjct: 279 TLDDEKWKNHEKTTEEVIEYMNDVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEV 338
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEEL----KDEERRELKRKKKKVSKERTKLQEKMNL 354
E EE + E+++++ +A EI+EL ++E+ LK+KKKK+ K + ++ ++ L
Sbjct: 339 EIEENLTEEQLED------RAMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRREL 392
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
KM++ GD GP + +D+E+F+L +IR +L IT
Sbjct: 393 KMIIDGDEGP-QAEDQEVFQLKKIRKAKELAEIT 425
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFL+KS+ VDLCAAPGGWMQVA Q M SS+I D + +K
Sbjct: 23 GYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +Q DI R ++ LK W VLHD
Sbjct: 83 IKNCIALQ---GDITTNETRAAIKKELKTWSADCVLHD 117
>gi|361124525|gb|EHK96607.1| putative AdoMet-dependent rRNA methyltransferase SPB1 [Glarea
lozoyensis 74030]
Length = 828
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 211/406 (51%), Gaps = 58/406 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I KTWK D VLHDG+PNVG WV D+++Q L L A+KLA+ L EG
Sbjct: 92 DITTDKCRATIRSHFKTWKADTVLHDGAPNVGTAWVQDSFNQAELALQAMKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVCQ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCQGFKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F EL A + +++K K GY YK +P S+FI+ P +L
Sbjct: 212 DPRSVFAELSDPTPNNEAKVFNPEIKKRKRDGYEDGNMTQYKEVPASEFIQTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
LN K F Q V L A
Sbjct: 272 ------------------SLN-KLSFDQPPNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI++CCKD+RVLGRK+ RNLLKW + EK K+ + EE
Sbjct: 291 ---LDKLPETTQEIRDCCKDLRVLGRKEFRNLLKWRLKVR----EKFGFATKKSVKEAEE 343
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E + MDEE +K + ++EL D+ER KR++++ ++++ K +M L M +
Sbjct: 344 EVAEVESMDEE----LKIAERLQELTDKERLRKKRERRRENEKKQKEIIRMQLHMTAPTE 399
Query: 362 LG---PTENDDEEMFKLSQIRTTDQLDLITASKPEVF--ADSDEEH 402
+G N D MF L + + D I K + +DS ++H
Sbjct: 400 IGLEQSGPNGDNSMFGLKAVDKSGAADKIAKGKMAILKASDSRQDH 445
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SS+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEAMPVSSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ K WK VLHD
Sbjct: 82 PIPRVITFQSDITTDKC--RATIRSHFKTWKADTVLHD 117
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAK RKK A+R++K++KK L + +++ EKA +I
Sbjct: 719 LNARPIKKVREAKDRKKFHAAQRLEKLRKKSALLQDEEGMTEKEKASSI 767
>gi|261191079|ref|XP_002621948.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
dermatitidis SLH14081]
gi|239590992|gb|EEQ73573.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
dermatitidis SLH14081]
Length = 829
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 206/398 (51%), Gaps = 64/398 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP +D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPPSSRNVSAEIFVVCQGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K +PVS+FI P
Sbjct: 212 DPRHVFAELQDPTPNHEAKVFNPEKKKR----KRDGYEEGNYTQFKEIPVSEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q + GG + +A
Sbjct: 268 SILGEYN-------------------KLSFEQST----------GGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EIQ CC+D++VLG+K+ RNLL+W + ++ K+ + E
Sbjct: 290 ------TLARLPETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGPSKPDE 343
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
EE +V + MDEE +++L + KE K E R+E +RK+K++ + + + M
Sbjct: 344 SEEVAEV--EPMDEELAIQQDLQRMRDKETSRKKKERRKENERKQKEIVRMQMHMTTPME 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
+ + G +G + MF L + + IT+ K
Sbjct: 402 IGIEQSGPIG-----EGAMFALKPVNRAGDVSQITSGK 434
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+V +DLCAAPG W QVA + M + S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSRVVIDLCAAPGSWCQVAAECMPSQSLIIGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHLKTWKADTVLHD 117
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV+EAK RKK R A+R++K++KK L E +S+ +KA+ I
Sbjct: 712 REKMRAINARPIKKVLEAKGRKKFRAAQRLEKLRKKSALLAEDEALSEKDKAQTI 766
>gi|327354853|gb|EGE83710.1| hypothetical protein BDDG_06655 [Ajellomyces dermatitidis ATCC
18188]
Length = 829
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 206/398 (51%), Gaps = 64/398 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP +D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPPSSRNVSAEIFVVCQGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K +PVS+FI P
Sbjct: 212 DPRHVFAELQDPTPNHEAKVFNPEKKKR----KRDGYEEGNYTQFKEIPVSEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q + GG + +A
Sbjct: 268 SILGEYN-------------------KLSFEQST----------GGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EIQ CC+D++VLG+K+ RNLL+W + ++ K+ + E
Sbjct: 290 ------TLARLPETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGPSKPDE 343
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
EE +V + MDEE +++L + KE K E R+E +RK+K++ + + + M
Sbjct: 344 SEEVAEV--EPMDEELAIQQDLQRMRDKETSRKKKERRKENERKQKEIVRMQMHMTTPME 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
+ + G +G + MF L + + IT+ K
Sbjct: 402 IGIEQSGPIG-----EGAMFALKPVNRAGDVSQITSGK 434
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMPSQSLIIGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHLKTWKADTVLHD 117
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV+EAK RKK R A+R++K++KK L E +S+ +KA+ I
Sbjct: 712 REKMRAINARPIKKVLEAKGRKKFRAAQRLEKLRKKSALLAEDEALSEKDKAQTI 766
>gi|239613095|gb|EEQ90082.1| AdoMet-dependent rRNA methyltransferase spb1 [Ajellomyces
dermatitidis ER-3]
Length = 804
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 206/398 (51%), Gaps = 64/398 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP +D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPPSSRNVSAEIFVVCQGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K +PVS+FI P
Sbjct: 212 DPRHVFAELQDPTPNHEAKVFNPEKKKR----KRDGYEEGNYTQFKEIPVSEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q + GG + +A
Sbjct: 268 SILGEYN-------------------KLSFEQST----------GGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EIQ CC+D++VLG+K+ RNLL+W + ++ K+ + E
Sbjct: 290 ------TLARLPETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGPSKPDE 343
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
EE +V + MDEE +++L + KE K E R+E +RK+K++ + + + M
Sbjct: 344 SEEVAEV--EPMDEELAIQQDLQRMRDKETSRKKKERRKENERKQKEIVRMQMHMTTPME 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
+ + G +G + MF L + + IT+ K
Sbjct: 402 IGIEQSGPIG-----EGAMFALKPVNRAGDVSQITSGK 434
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMPSQSLIIGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHLKTWKADTVLHD 117
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV+EAK RKK R A+R++K++KK L E +S+ + A+ I
Sbjct: 712 REKMRAINARPIKKVLEAKGRKKFRAAQRLEKLRKKSALLAEDEALSEKDNAQTI 766
>gi|346974298|gb|EGY17750.1| AdoMet-dependent rRNA methyltransferase spb-1 [Verticillium dahliae
VdLs.17]
Length = 878
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 204/377 (54%), Gaps = 52/377 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKTWKADTVLHDGAPNVGTAWNQDSFNQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK F EL + A + +++K K GY LYK P S+FI+ + P +L
Sbjct: 212 DPKAVFAELKDQAPNNEAKVYNPEIKKRKRDGYEEGDYTLYKEAPASEFIQTDDPLAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GY K + Q V L A
Sbjct: 272 -------GY------------NKLTWAQPKNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI+ CC+D++VLGR+D + LLKW + D K+++ +G E
Sbjct: 291 ---LSKLPETTDEIRLCCEDLKVLGRRDFKILLKWRLKVRDIFGLSTKKDDGDGPVPVPE 347
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E ++MDEE +K +E++ ++D E + KR++++ ++++ K +M + M+ D
Sbjct: 348 EVAEVEDMDEE----LKIQEELQAMRDRESTKKKRERRRENEKKQKEIVRMQMNMMAPMD 403
Query: 362 LGPTENDD---EEMFKL 375
+G ++ + MF+L
Sbjct: 404 IGMEQDGPMGADSMFRL 420
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLIDLCAAPGSWCQVAAETMPVNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 AIPKCITFQSDITTDKC--RATLRQHLKTWKADTVLHD 117
>gi|340514740|gb|EGR45000.1| hypothetical protein TRIREDRAFT_23327 [Trichoderma reesei QM6a]
Length = 828
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 208/410 (50%), Gaps = 59/410 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG W D+++Q L L +LKLA+ L EG
Sbjct: 92 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWAQDSFNQAELALQSLKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ Y AP +D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKHIDPRFL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F EL G + +V+K K GY + +K + S FI+ P +L
Sbjct: 212 DPRSVFAELAGGTPNNEAKVYNPEVKKRKRDGYEEGDYIQFKEIAASDFIQTSDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q +P G + +A
Sbjct: 272 SYN-------------------KLSFHQ----------SPNGDIALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ K P TT EI+ECC D++VLGRK+ + LLKW + D +K K E
Sbjct: 290 --ALDKLPETTAEIRECCADLKVLGRKEFKLLLKWRLKVRDIFGLSQK---KAAAPEVAE 344
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E + MDEE ++ +E++ +KD E + KR+K+K ++++ + +M L M+ D
Sbjct: 345 EVAGVESMDEE----LRIQEELQAMKDNENAKRKREKRKENEQKRREIIRMQLNMMAPMD 400
Query: 362 LGPTEN---DDEEMFKLSQIRTTDQLDLITASK----PEVFADSDEEHID 404
+G E+ + MF L I ++ ++ + K P + EE +D
Sbjct: 401 IGMEESGPMGEGAMFSLKTIDKSNGMNRFSRGKMITVPNTETKAAEETLD 450
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPVNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 PIPRVITFQSDITTDKC--RATIRQHFKTWKADTVLHD 117
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
N RPI+KV EAKARKK + A++++K+KKK + L +++ EKA +I+
Sbjct: 719 FNARPIKKVREAKARKKFKTAQKLEKLKKKSDMLAADEGMTEKEKAESIQ 768
>gi|198424890|ref|XP_002122891.1| PREDICTED: similar to Putative rRNA methyltransferase 3 (rRNA
(uridine-2-O-)-methyltransferase 3) [Ciona intestinalis]
Length = 744
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 216/390 (55%), Gaps = 78/390 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DIT + CR + REL WKVD LHDG+PNVG NW++DAY Q LTL ALKLAS L +
Sbjct: 91 DDITKESCRTQLRRELHKWKVDCFLHDGAPNVGKNWLHDAYSQSVLTLAALKLASEFLCK 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRSKDY +L+WIF QLF +VH+TKPQASR SAEIFVVCQ + +P K+D KF
Sbjct: 151 GGWFITKVFRSKDYQALMWIFGQLFNKVHATKPQASRNVSAEIFVVCQGFKSPDKIDKKF 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDV-NVLYKNLPVSKFIEHETPTVLL 180
FDPK F+E+ A+ +N L + +K KA GY + ++LY VS+F+ P +L
Sbjct: 211 FDPKSVFQEVEAKTRPVNILDFEPKKKKKAKGYGDEAKDLLYMKKTVSEFLGCSQPMQML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+E+ +
Sbjct: 271 SEISEI--------------------------------------------------VFED 280
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---WKVLHDEKTEKEKEEEKEGGE 297
DD+ V HP T EI+E KDI+ LG+K+++ LLKW W+ L+ + E+ +E E+
Sbjct: 281 DDQKV--HPLVTDEIKEHVKDIKRLGKKEIKTLLKWHKKWQKLNAPQVEEVEENEE---- 334
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EE + ++I+E+++ E RELK+KKK V+KER KL+E+M+ M+
Sbjct: 335 -------------EEVDSEEEMERKIQEIQENETRELKKKKKVVTKERQKLRERMS-NMV 380
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLDLI 387
+ +D E+F LS+I + ++ +
Sbjct: 381 TSTN----SQEDMELFALSKINSARKMGTV 406
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 15/102 (14%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR+R+AFKL+QLN+KF FLQ S+ CVDLCAAPGGW+QVA ++M SSII D ++
Sbjct: 23 GYRARSAFKLLQLNKKFNFLQSSQACVDLCAAPGGWLQVASEHMPMSSIIVGVDLVPIRP 82
Query: 249 PSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWKV---LHD 282
V Q E C R +R L WKV LHD
Sbjct: 83 VPKCVTFQDDITKESC-------RTQLRRELHKWKVDCFLHD 117
>gi|440640705|gb|ELR10624.1| hypothetical protein GMDG_04893 [Geomyces destructans 20631-21]
Length = 838
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 156/276 (56%), Gaps = 47/276 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I KTWK D VLHDG+PNVG WV D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATIRSHFKTWKADTVLHDGAPNVGTAWVQDSFNQAELALQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVCQ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCQGFKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK+ F EL A+ N K +++K K GY +K +P S+FI+ P +L
Sbjct: 212 DPKFVFAEL-ADPTPNNEAKVFNPEIKKRKRDGYEEGNYTQFKEVPASEFIQTTDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LNR F F Q P G + +A + M
Sbjct: 271 GS------------------LNR-FSFDQ----------PPNGDVALAALDKM------- 294
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
P T EI++CCKD+RVLGRK+ RNLLKW
Sbjct: 295 --------PETIEEIRDCCKDLRVLGRKEFRNLLKW 322
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWSQVAAECMPVNSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ K WK VLHD
Sbjct: 82 TIPRVITFQGDITTDKC--RATIRSHFKTWKADTVLHD 117
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 476 AASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKA 535
+A+ ++K +N RPI+KV EAK RKK A+R++K++KK L + +++ EKA
Sbjct: 716 SAAGAAAIKEKLRAMNARPIKKVREAKDRKKFHAAQRLEKLRKKSALLNDEEGMTEKEKA 775
Query: 536 RNI 538
+I
Sbjct: 776 SSI 778
>gi|268571471|ref|XP_002641056.1| Hypothetical protein CBG22467 [Caenorhabditis briggsae]
Length = 827
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 155/411 (37%), Positives = 231/411 (56%), Gaps = 72/411 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++ R AI +ELKTW D VLHDG+PNVG+NWV+DA+ Q CLTL ALKLA+ IL++G
Sbjct: 92 DITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY+ L+ +F++LF+RVH KP ASR ESAEIFVVC+ Y P K+ ++
Sbjct: 152 GTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQKPEKVGAEYL 211
Query: 123 DPKYAFKELGAEDGK----LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F +G N L KQ +K+KA GY ++ ++ + S FI+
Sbjct: 212 DPKKVFANPDGSEGTKPNPQNMLIGKQ-KKAKAEGYDTNSLAIHSKVNASDFIKS----- 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G++ + + +++I
Sbjct: 266 -------------------------------------------SGYLDI----LGEANVI 278
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DD H TT E+ E KD++VLG +++R LL+W K + + E E++ EG
Sbjct: 279 LLDDPKWKNHEKTTEEVVEYMKDVKVLGPRELRVLLRWRKSMLE-----TLEAERKAVEG 333
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEEL----KDEERRELKRKKKKVSKERTKLQEKMNL 354
E ++ +E+++ EE+ E +A EI+EL ++E+ LK+KKKK+ K + ++ ++ L
Sbjct: 334 EAQDVEIEEDLTEEQIE-DRAMAEIDELIAKASEDEKAALKKKKKKMLKAKARVLKRREL 392
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT----ASKPEVFADSDEE 401
KM++ GD GP + +D+E+F+L +IR +L IT A E DSD+E
Sbjct: 393 KMIIDGDEGP-QAEDQEVFQLKKIRKAKELAEITKETQAPDFENVEDSDDE 442
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFL+KS+ VDLCAAPGGWMQVA Q M SS+I D + +K
Sbjct: 23 GYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +Q DI R ++ LK W VLHD
Sbjct: 83 IKNCIALQ---GDITTNETRAAIKKELKTWSADCVLHD 117
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 469 YWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPD 528
Y++++ V YR++ E N RP +KV EA+ARK+K+ R+++ KKK E ++E
Sbjct: 674 YFKQTPVTKEQVALYRERMREFNARPSKKVAEARARKQKKMQRKLESAKKKAEGILENDQ 733
Query: 529 VSDAEKARNIR 539
+ +EK R ++
Sbjct: 734 MEHSEKVREMK 744
>gi|400596105|gb|EJP63889.1| AdoMet-dependent rRNA methyltransferase spb1 [Beauveria bassiana
ARSEF 2860]
Length = 829
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 201/400 (50%), Gaps = 55/400 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LKTWK D VLHDG+PNVG WV D+++Q L L A+KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDSFNQAELALQAMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF V +TKP +SR SAEIFVVC+ Y AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTHVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPRFL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F EL GA + +V+K K GY LYK +P S+FI P +L
Sbjct: 212 DPRSVFAELAGATPNNEAKVYNPEVKKRKRDGYDEGDYTLYKEVPASEFIHTMDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q V L A
Sbjct: 272 SCN-------------------KLSFQQPLNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI++CC D++ LGR+D + LLKW + D KE+ E
Sbjct: 291 ---LDKLPETTPEIRDCCSDLKTLGRRDFKLLLKWRLRVRDIFGLATKEKAV---AAASE 344
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E EMDEE ++ +E++ ++D + + KR+K++ +++R K +M + M+ D
Sbjct: 345 EVAEVGEMDEE----LQIQEELQAMRDRDSAKKKREKRRENEKRQKEIVRMQMNMISPMD 400
Query: 362 LGPTEN---DDEEMFKLSQIRTTDQLDLITASKPEVFADS 398
+G E ++ MF L T+ + + K D+
Sbjct: 401 IGMEEAGPIGEDAMFALKTADKTEAMRRLNRGKMATITDA 440
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RA+FKL+QLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D S +K
Sbjct: 22 KGYRARASFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVASEVMPVNSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRQHLKTWKADTVLHD 117
>gi|145254616|ref|XP_001398682.1| AdoMet-dependent rRNA methyltransferase spb1 [Aspergillus niger CBS
513.88]
gi|134084264|emb|CAK47295.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 211/398 (53%), Gaps = 65/398 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC++Y AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFASVEATKPPSSRNVSAEIFVVCRNYKAPKRIDPKFL 211
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPKHVFAELADPTPNNEAKVFNPEKKKR----KREGYEEGDYTQFKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ +P G ++ +++
Sbjct: 268 AIL--------GSYNKLSFQ---------------------QSPSG-------DLALATL 291
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
+D TT EI+ CC+D++VLG+K+ RNLL+ W++ EK ++ + E
Sbjct: 292 ERLED--------TTDEIKACCEDLKVLGKKEFRNLLR-WRLKVREKFGLAVKKGAQTKE 342
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E EE MD+E ++ELM+ KE + K E R+E +RK+K++ +LQ M
Sbjct: 343 DETEEVAEVAPMDDELAIQEELMRLREKETSKQKKERRKENERKRKEI----VRLQMHMT 398
Query: 354 LKM-LLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
M + K LGP N ++ F L + D I A
Sbjct: 399 TPMDIGKEQLGP--NGEDATFSLKRAERGGVRDTIAAG 434
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPAQSIIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RTTIRQHLKHWKADTVLHD 117
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 691 INARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAI 739
>gi|350630529|gb|EHA18901.1| hypothetical protein ASPNIDRAFT_120052 [Aspergillus niger ATCC
1015]
Length = 794
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 211/398 (53%), Gaps = 65/398 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L EG
Sbjct: 86 DITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLAEG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC++Y AP ++D KF
Sbjct: 146 GTFVTKVFRSKDYNPLLWVFKQLFASVEATKPPSSRNVSAEIFVVCRNYKAPKRIDPKFL 205
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 206 DPKHVFAELADPTPNNEAKVFNPEKKKR----KREGYEEGDYTQFKEIPVTEFINTTDPI 261
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ +P G ++ +++
Sbjct: 262 AIL--------GSYNKLSFQ---------------------QSPSG-------DLALATL 285
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
+D TT EI+ CC+D++VLG+K+ RNLL+ W++ EK ++ + E
Sbjct: 286 ERLED--------TTDEIKACCEDLKVLGKKEFRNLLR-WRLKVREKFGLAVKKGAQTKE 336
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E EE MD+E ++ELM+ KE + K E R+E +RK+K++ +LQ M
Sbjct: 337 DETEEVAEVAPMDDELAIQEELMRLREKETSKQKKERRKENERKRKEI----VRLQMHMT 392
Query: 354 LKM-LLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
M + K LGP N ++ F L + D I A
Sbjct: 393 TPMDIGKEQLGP--NGEDATFSLKRAERGGVRDTIAAG 428
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A SII D + +K
Sbjct: 16 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPAQSIIVGVDLAPIK 75
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 76 PIPRVITFQSDITTEKC-------RTTIRQHLKHWKADTVLHD 111
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 685 INARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAI 733
>gi|358366633|dbj|GAA83253.1| rRNA methyltransferase Spb1 [Aspergillus kawachii IFO 4308]
Length = 796
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 211/401 (52%), Gaps = 71/401 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC++Y AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFASVEATKPPSSRNVSAEIFVVCRNYKAPKRIDPKFL 211
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPKHVFAELADPTPNNEAKVFNPEKKKR----KREGYEEGDYTQFKEVPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +P G + +A
Sbjct: 268 AILGSCN-------------------KLSFQQ----------SPSGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + TT EI+ CC+D++VLG+K+ RNLL+W + E+ K+GG+
Sbjct: 290 ------TLERLEETTDEIKACCEDLKVLGKKEFRNLLRWRLKVR----EQFGLAVKKGGQ 339
Query: 298 GEEE--EKVVE-DEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQE 350
+E+ E+V E MD+E ++ELM+ KE + K E R+E +RK+K++ +LQ
Sbjct: 340 AKEDETEEVAEVAPMDDELAIQEELMRLREKETSKQKKERRKENERKRKEI----VRLQM 395
Query: 351 KMNLKM-LLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
M M + K LGP N ++ F L + D + A
Sbjct: 396 HMTTPMDIGKEQLGP--NGEDATFSLKRAERGGIRDTLAAG 434
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPAQSIIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RTTIRQHLKHWKADTVLHD 117
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 686 INARPIKKVMEAKGRKKFKAAQRLEKLRKKSALLADDEALSERDKSQAI 734
>gi|451845533|gb|EMD58845.1| hypothetical protein COCSADRAFT_194278 [Cochliobolus sativus
ND90Pr]
Length = 839
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 212/400 (53%), Gaps = 62/400 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LK K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKHLKCDTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKHLDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D + F EL A+ N K K +V+K K GY +K PVS FI+ P +L
Sbjct: 212 DARSVFAEL-ADPTPNNEAKVFKPEVKKRKREGYEEGDWTQFKEAPVSDFIQTTDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LN K F QK P G + +A
Sbjct: 271 GG------------------LN-KLSFEQK----------PNGDIAIA------------ 289
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---WKVLHDEKTEKEKEEEKEGGE 297
++ K P TT EI++CC D++VLGR D + LL+W + + ++K+K +E + E
Sbjct: 290 ---TIDKLPETTKEIRDCCADLKVLGRADFKRLLRWRLKVREIFGFASKKDKADEAKAKE 346
Query: 298 GEEEEKVVEDE-MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+E E+V E E MDEE M+ +E+E LK+++ + K++++ ++ R K ++ + M
Sbjct: 347 AQEGEEVAEIESMDEE----MQIQEELERLKEKDTKAKKKQRRTENERRQKEITRLQMNM 402
Query: 357 LLKGDL-----GPTENDDEEMFKLSQIRTTDQLDLITASK 391
D+ GPT D MF L + L+ I K
Sbjct: 403 ATPFDIGLEQVGPTGED--AMFGLKAVDKAGALNKIAKGK 440
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A+S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPANSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQE--CCKDIRVLGRKDVRNLLKWWKVLHD 282
+ Q R R+ +++ LK VLHD
Sbjct: 82 PIPRCITFQSDITTDKCRATLRQHLKH-LKCDTVLHD 117
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EA+ARKK + A+R++K+KKK L + +++ EKA++I
Sbjct: 728 LNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADEEGMTEKEKAQSI 776
>gi|156402433|ref|XP_001639595.1| predicted protein [Nematostella vectensis]
gi|156226724|gb|EDO47532.1| predicted protein [Nematostella vectensis]
Length = 306
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 157/270 (58%), Gaps = 54/270 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++C+ + +ELKTWK D VL+DG+PNVG WV DA+ Q LTL ALKLA LKE
Sbjct: 91 EDITTERCKQLLKKELKTWKADCVLNDGAPNVGTAWVQDAFTQAELTLSALKLACENLKE 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TKVFRSKDY LLW+F+QLF+ VHSTKPQASR ESAEIFVVCQ YIAP+K+D K
Sbjct: 151 GGWFITKVFRSKDYQPLLWVFQQLFKSVHSTKPQASRNESAEIFVVCQGYIAPSKIDPKM 210
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F+E+ D K L ++ K +A GY L+ P S+FI+ E+P LL
Sbjct: 211 LDPKFVFQEVQQLDLKKPTLLNEK--KKRAEGYKECDYTLHTKTPASEFIQSESPLELLT 268
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
E+ + D
Sbjct: 269 ETNEI---------------------------------------------------VFDD 277
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVR 271
D+ +L H TT +I+ECC+DI+VLG+ DVR
Sbjct: 278 DK-ILNHTLTTEDIKECCRDIKVLGKPDVR 306
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 43/50 (86%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQLNRKF FLQKS+ +DLCAAPGGW+QVA + M SSII
Sbjct: 23 GYRARSAFKLIQLNRKFGFLQKSRCLIDLCAAPGGWLQVASKFMPMSSII 72
>gi|70997385|ref|XP_753441.1| rRNA methyltransferase Spb1 [Aspergillus fumigatus Af293]
gi|73621934|sp|Q4WVH3.1|SPB1_ASPFU RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|66851077|gb|EAL91403.1| rRNA methyltransferase Spb1, putative [Aspergillus fumigatus Af293]
gi|159126832|gb|EDP51948.1| rRNA methyltransferase Spb1, putative [Aspergillus fumigatus A1163]
Length = 795
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 245/473 (51%), Gaps = 76/473 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPKHVFAELTDSTPNNEARVFNPEKKKR----KREGYEEGDYTQFKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ +PGG + +A N +
Sbjct: 268 AIL--------GTYNKLSFE---------------------QSPGGDLALATLNRLE--- 295
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT EI+ CC+D+++LG+K+ R+LL+W + ++ K+ + + E
Sbjct: 296 ------------ETTDEIRTCCEDLKILGKKEFRSLLRWRLKVREKFGLVVKKGQAKADE 343
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
EE +V MDEE ++EL + KE + K E R+E ++K+K++ + + + M+
Sbjct: 344 PEEVAEVA--PMDEELAIQEELQRLQEKESAKRKKERRKENEKKRKEIIRMQMHMTTPMD 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK-PEVFADSDEEHIDIVPKKIKY 412
+ M LGP D+ F L ++ D+I + K E+ +DS+++ +
Sbjct: 402 IGM---EQLGP--GGDDATFSLKRVERDGARDVIASGKLAEIESDSEDDQTE-------- 448
Query: 413 NVEKSELDDSGLYYKNPDDSDLE-FESSSED-ENDVEKKLVEEEFDTDEEDGL 463
+ E DD G + DS E ++ ED ++ V K ++++ +E DG
Sbjct: 449 -SDYDESDDEGDRLERELDSLYEQYQERREDRDSKVRAKKARKDYEAEEWDGF 500
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPTQSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRQHLKHWKADTVLHD 117
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 686 INARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAI 734
>gi|389634901|ref|XP_003715103.1| AdoMet-dependent rRNA methyltransferase SPB1 [Magnaporthe oryzae
70-15]
gi|374095444|sp|Q52C47.2|SPB1_MAGO7 RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|351647436|gb|EHA55296.1| AdoMet-dependent rRNA methyltransferase SPB1 [Magnaporthe oryzae
70-15]
Length = 865
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 219/408 (53%), Gaps = 61/408 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LKTWK D VLHDG+PNVG WV D+++Q LTL A+KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDSFNQAELTLQAMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY S+LW+F QLF++V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSMLWVFNQLFKKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F EL A+ N K K +++K K GY YK LP +FI+ P +L
Sbjct: 212 DPRAVFAEL-ADPTPNNEAKVYKPEIKKRKRDGYEEGDYTQYKELPAYEFIQSTDPIAIL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
G +R + ++ +K +A +++
Sbjct: 271 --------GSTNRLS-----------------------------LEQSKNGDVALAVLE- 292
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD------EKTEKEKEEEKE 294
K P TT EI+ CC D++VLGRK+ + LLKW + + +K+ K++EE
Sbjct: 293 ------KLPETTDEIRTCCADLKVLGRKEFKLLLKWRLAVREKLGFPTKKSVKKEEEAAA 346
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
EE +E MDEE M+ E+E+LK+ + KR+++K ++ + K +M +
Sbjct: 347 AVAAAEEVAKIE-SMDEE----MRIQHELEKLKERNSTKKKRERRKENERKQKDIVRMQM 401
Query: 355 KMLLKGDLGPTENDDE---EMFKLSQIRTTDQLDLITASKPEVFADSD 399
M+ D+G + E MF L + D + + K V +++D
Sbjct: 402 HMVAPMDIGVEQAGPEGEDAMFALRAVEKGDVMRRLAKGKMVVASEAD 449
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SS+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPVSSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRQHLKTWKADTVLHD 117
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAK RKK + A+R++K+KKK + L+ +++ EKA +I
Sbjct: 753 FNARPIKKVREAKGRKKMKAAQRLEKLKKKSDLLVNEEGMTEKEKAESI 801
>gi|119478916|ref|XP_001259487.1| rRNA methyltransferase Spb1, putative [Neosartorya fischeri NRRL
181]
gi|119407641|gb|EAW17590.1| rRNA methyltransferase Spb1, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 218/410 (53%), Gaps = 65/410 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPKHVFAELTDATPNNEARVFNPEKKKR----KREGYEEGDYTQFKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ +PGG + +A N +
Sbjct: 268 AIL--------GTYNKLSFE---------------------QSPGGDLALATLNRLE--- 295
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT EI+ CC+D+++LG+K+ RNLL+W + ++ K+ + + E
Sbjct: 296 ------------ETTDEIRTCCEDLKILGKKEFRNLLRWRLKVREKFGLVVKKGQAKTDE 343
Query: 298 GEEEEKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
EE +V MDEE ++EL + KE + K E R+E ++K+K++ + + + M+
Sbjct: 344 PEEVAEVA--PMDEELAIQEELQRLQEKESSKRKKERRKENEKKRKEIIRMQMHMTTPMD 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK-PEVFADSDEEH 402
+ M LGP D F L ++ D+I + K E+ +DS+++
Sbjct: 402 IGM---EQLGPGGED--ATFSLKRVERDGARDVIASGKVAEIESDSEDDQ 446
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPTQSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRQHLKHWKADTVLHD 117
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 685 INARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAI 733
>gi|440475598|gb|ELQ44267.1| AdoMet-dependent rRNA methyltransferase spb-1 [Magnaporthe oryzae
Y34]
gi|440481859|gb|ELQ62396.1| AdoMet-dependent rRNA methyltransferase spb-1 [Magnaporthe oryzae
P131]
Length = 884
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 219/408 (53%), Gaps = 61/408 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LKTWK D VLHDG+PNVG WV D+++Q LTL A+KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDSFNQAELTLQAMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY S+LW+F QLF++V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSMLWVFNQLFKKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F EL A+ N K K +++K K GY YK LP +FI+ P +L
Sbjct: 212 DPRAVFAEL-ADPTPNNEAKVYKPEIKKRKRDGYEEGDYTQYKELPAYEFIQSTDPIAIL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
G +R + ++ +K +A +++
Sbjct: 271 --------GSTNRLS-----------------------------LEQSKNGDVALAVLE- 292
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD------EKTEKEKEEEKE 294
K P TT EI+ CC D++VLGRK+ + LLKW + + +K+ K++EE
Sbjct: 293 ------KLPETTDEIRTCCADLKVLGRKEFKLLLKWRLAVREKLGFPTKKSVKKEEEAAA 346
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
EE +E MDEE M+ E+E+LK+ + KR+++K ++ + K +M +
Sbjct: 347 AVAAAEEVAKIE-SMDEE----MRIQHELEKLKERNSTKKKRERRKENERKQKDIVRMQM 401
Query: 355 KMLLKGDLGPTENDDE---EMFKLSQIRTTDQLDLITASKPEVFADSD 399
M+ D+G + E MF L + D + + K V +++D
Sbjct: 402 HMVAPMDIGVEQAGPEGEDAMFALRAVEKGDVMRRLAKGKMVVASEAD 449
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SS+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPVSSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRQHLKTWKADTVLHD 117
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAK RKK + A+R++K+KKK + L+ +++ EKA +I
Sbjct: 772 FNARPIKKVREAKGRKKMKAAQRLEKLKKKSDLLVNEEGMTEKEKAESI 820
>gi|308474701|ref|XP_003099571.1| hypothetical protein CRE_29065 [Caenorhabditis remanei]
gi|308266583|gb|EFP10536.1| hypothetical protein CRE_29065 [Caenorhabditis remanei]
Length = 784
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 227/394 (57%), Gaps = 68/394 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++ R AI +ELKTW D VLHDG+PNVG+NWV+DA+ Q CLTL ALKLA+ IL++G
Sbjct: 92 DITTNETRAAIKKELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY+ L+ +F++LF+RVH KP ASR ESAEIFVVC+ Y+ P K+ F
Sbjct: 152 GTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYLKPDKVGADFL 211
Query: 123 DPKYAFKELGAEDGK----LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+PK F +G N L KQ +K+KA GY +D ++ + + FI ++P
Sbjct: 212 NPKKVFANPDGSEGTKPNPQNLLIGKQ-KKAKAEGYDTDSLAVHSTIKATDFI--KSP-- 266
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G++ + + +++I
Sbjct: 267 --------------------------------------------GYLDI----LGVANVI 278
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DDE H TT E++E KD++VLG +++R LL+W K + + E E++ EG
Sbjct: 279 LLDDEKWKNHEKTTEEVEEYMKDVKVLGPRELRVLLRWRKSMLE-----TIEAERKALEG 333
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEEL----KDEERRELKRKKKKVSKERTKLQEKMNL 354
E ++ V+E E EE+E KA EI+E+ ++E+ LK+KKKK+ K + ++ ++ L
Sbjct: 334 EAQDVVIE-ETLTEEQEEDKAMAEIDEMIAKASEDEKAALKKKKKKMLKAKARVLKRREL 392
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
KM++ GD GP + +D+E+F+L +IR +L IT
Sbjct: 393 KMIIDGDEGP-QAEDQEVFQLKKIRRAKELAEIT 425
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFL+KS+ VDLCAAPGGWMQVA Q M SS+I D + +K
Sbjct: 23 GYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ +Q DI R ++ LK W VLHD
Sbjct: 83 IKNCIALQ---GDITTNETRAAIKKELKTWSADCVLHD 117
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 469 YWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPD 528
Y++++ V YR++ E N RP +KV EAKARK+++ R+++ KKK E ++E
Sbjct: 675 YFKQTPVTKEQVALYRERMREFNARPSKKVAEAKARKQRKMQRKLESAKKKAEGILENDQ 734
Query: 529 VSDAEKARNIR 539
+ +EK R ++
Sbjct: 735 MEHSEKVREMK 745
>gi|67515621|ref|XP_657696.1| hypothetical protein AN0092.2 [Aspergillus nidulans FGSC A4]
gi|73621939|sp|Q5BH88.1|SPB1_EMENI RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|40746114|gb|EAA65270.1| hypothetical protein AN0092.2 [Aspergillus nidulans FGSC A4]
gi|259489716|tpe|CBF90216.1| TPA: AdoMet-dependent rRNA methyltransferase spb1 (EC
2.1.1.-)(2'-O-ribose RNA
methyltransferase)(S-adenosyl-L-methionine-dependent
methyltransferase)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BH88] [Aspergillus
nidulans FGSC A4]
Length = 806
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 197/374 (52%), Gaps = 58/374 (15%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT+KCR I LK WK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L E
Sbjct: 91 QDITTEKCRATIRSHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLESLKLATEFLVE 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ Y AP ++D KF
Sbjct: 151 GGTFVTKVFRSKDYNPLLWVFKQLFMSVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPKF 210
Query: 122 FDPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETP 176
D K+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 211 LDSKHVFAELADPTPNNEAKVFNPEKKKR----KREGYEEGDWTQFKEIPVTEFINTTDP 266
Query: 177 TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
+L K F Q+ PGG + +A + +
Sbjct: 267 IAILGSCN-------------------KLSFQQQ----------PGGDLALATLDRL--- 294
Query: 237 IIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG 296
P TT EI+ CC+D++VLG+K+ RNLL+W + ++ K+ + +
Sbjct: 295 ------------PETTDEIRNCCEDLKVLGKKEFRNLLRWRLKVREKFGLVVKKGQAKDD 342
Query: 297 EGEEEEKV--VEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
E EE ++ ++DE+ +E+ L KE K E R+E +RK+K++ + + + M++
Sbjct: 343 EAEEVAEIAPMDDELAIQEELLRLKEKESARSKKERRKENERKRKEIVRMQMHMTTPMDI 402
Query: 355 KMLLKGDLGPTEND 368
M LGP D
Sbjct: 403 GM---EQLGPGGED 413
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKL+QLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAQSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ Q+ DI R +R+ LK WK VLHD
Sbjct: 82 PIPRVITFQQ---DITTEKCRATIRSHLKHWKADTVLHD 117
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 476 AASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKA 535
AA++ ++R IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +KA
Sbjct: 686 AAAIQEKWR----AINARPIKKVMEAKGRKKFKAAQRIEKLRKKSALLADDETMSERDKA 741
Query: 536 RNI 538
+ I
Sbjct: 742 QAI 744
>gi|451998084|gb|EMD90549.1| hypothetical protein COCHEDRAFT_1195737 [Cochliobolus
heterostrophus C5]
Length = 839
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/403 (38%), Positives = 212/403 (52%), Gaps = 68/403 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LK K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKHLKCDTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKHLDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D + F EL A+ N K K +V+K K GY +K PVS FI+ P +L
Sbjct: 212 DARSVFAEL-ADPTPNNEAKVFKPEVKKRKREGYEEGDWTQFKEAPVSDFIQTTDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LN K F QK P G + +A
Sbjct: 271 GG------------------LN-KLSFEQK----------PNGDIAIA------------ 289
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV--LHDEKTEKEKEEEKEGGE 297
++ K P TT EI++CC D++VLGR D + LL+W KV + ++K+K +E + E
Sbjct: 290 ---TIDKLPETTKEIRDCCADLKVLGRADFKRLLRWRLKVREIFGFASKKDKADEAKAKE 346
Query: 298 GEEEEKVVEDE-MDEEEKELMKATKEIEEL--------KDEERRELKRKKKKVSKERTKL 348
+E E+V E E MDEE M+ +E+E L K + R E +R++K++++ + +
Sbjct: 347 AQEGEEVAEIESMDEE----MQIQEELERLKEKDTKAKKKQRRAENERRQKEITRLQMNM 402
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
++ + G +G ++ MF L + L+ I K
Sbjct: 403 ATPFDIGLEQVGPIG-----EDAMFGLKAVDKAGALNKIAKGK 440
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A+S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPANSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQE--CCKDIRVLGRKDVRNLLKWWKVLHD 282
+ Q R R+ +++ LK VLHD
Sbjct: 82 PIPRCITFQSDITTDKCRATLRQHLKH-LKCDTVLHD 117
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EA+ARKK + A+R++K+KKK L + +++ EKA++I
Sbjct: 728 LNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADEEGMTEKEKAQSI 776
>gi|254584860|ref|XP_002497998.1| ZYRO0F18304p [Zygosaccharomyces rouxii]
gi|186928984|emb|CAQ43309.1| AdoMet-dependent rRNA methyltransferase SPB1 [Zygosaccharomyces
rouxii]
gi|238940891|emb|CAR29065.1| ZYRO0F18304p [Zygosaccharomyces rouxii]
Length = 839
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 204/392 (52%), Gaps = 62/392 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFSQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSKDYNKLMWVFQQLFEKVEATKPPASRNVSAEIFVVCRGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK F+EL + + A + K GY N+LY +P+++FI HE P LL
Sbjct: 214 DPKEVFEELPDKPQNMEARVFNPDKHTRKREGYEDGDNLLYHEMPLTEFIMHEDPIYLL- 272
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GY ++ F + N ++ ++K K
Sbjct: 273 -------GYMNK--FTYDENNHDWKIVKKLK----------------------------- 294
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
TT E C +D++VLG+K+ + +LKW K + +KE EE
Sbjct: 295 --------QTTGEFLACIEDLKVLGKKEFKMILKWRKAARELLGVDKKE--------EEA 338
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
K+ +DEEE + KE++ L++++R E KR++++ ++ + K +MN+ ML GD
Sbjct: 339 PKIEVQPLDEEE----QIDKELQSLQEKQRLEQKRERRRRNEAKMKEIHRMNMNMLTPGD 394
Query: 362 LG--PTENDDEEMFKLSQIRTTDQLDLITASK 391
LG E E F L T LD + K
Sbjct: 395 LGIEAAEIGRESFFNLKTAEKTGILDKLAKGK 426
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKVIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLILGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + Q E C R +R +K WK VLHD
Sbjct: 83 RPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R +R++K+KKK +++ D S+ +KA I
Sbjct: 726 LNARPIKKVAEAKARKKMRSVQRLEKIKKKAGLIVDEADKSEKDKAEEI 774
>gi|428167936|gb|EKX36887.1| hypothetical protein GUITHDRAFT_58549, partial [Guillardia theta
CCMP2712]
Length = 313
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/278 (44%), Positives = 159/278 (57%), Gaps = 52/278 (18%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITTDKC+ AI +KTWKVD+VL+DG+PNVG NW DAY Q LTL ALKLA+ L
Sbjct: 79 EDITTDKCKAAIKNHIKTWKVDLVLNDGAPNVGANWTKDAYSQSELTLQALKLATNFLAP 138
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRS DY SL+W+ QLF+RV +TKPQASR ESAEIFVVC Y+AP K+D K
Sbjct: 139 GGNFVTKVFRSADYNSLIWVLNQLFKRVEATKPQASRNESAEIFVVCLGYLAPKKIDPKL 198
Query: 122 FDPKYAFKELGAEDG---KLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F+++ DG K N L++K++ GY + +LYK + +F+ HE
Sbjct: 199 LDPKNVFEDVN--DGPAKKANVLQQKKLNVRHRDGYEEGITMLYKEISAEEFVLHED--- 253
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
A +++ K F + +V
Sbjct: 254 ----------------ALQVLTDYNKIVFREGHEV------------------------- 272
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
DE +L+H T E++ECCKD+RVLG+ D R LL+W
Sbjct: 273 ---DEQLLEHEKTNEEVKECCKDLRVLGKGDFRKLLRW 307
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKLIQLN+KF+ L K+KV +DLC APG W QVA +N SSII D +K
Sbjct: 10 QGYRSRAAFKLIQLNKKFDLLSKAKVVLDLCGAPGSWSQVAAKNCPVSSIILCVDLCPIK 69
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWKV 279
+ +QE DI + ++N +K WKV
Sbjct: 70 PIKRVIALQE---DITTDKCKAAIKNHIKTWKV 99
>gi|406866934|gb|EKD19973.1| Spb1 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 827
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 212/405 (52%), Gaps = 64/405 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I KTWK D VLHDG+PNVG WV D+++Q L L A+KLA+ L EG
Sbjct: 92 DITTDKCRATIRSHFKTWKADTVLHDGAPNVGTAWVQDSFNQAELVLQAMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFAKVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK F EL A + +++K K GY +K + S+FI+ P +L
Sbjct: 212 DPKSVFAELSDPTPNNEAKVFNPEIKKRKRDGYEEGNYTQFKEVTASEFIQTTDPIAIL- 270
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G SR +F+ P G + +A
Sbjct: 271 -------GGMSRLSFQ---------------------QPPNGDVALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV--LHDEKTEKEKEEEKEGGEG 298
++ K P TT +I+ C DIRVLGRK+ R LLKW KV L T+K K
Sbjct: 290 --AIDKLPETTEDIRVACADIRVLGRKEFRMLLKWRLKVRELFGLATKKSK--------A 339
Query: 299 EEEEKVVEDE-MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+E+VVE E MDEE +K +E++ L ++E KR++++ ++++ + +M L M
Sbjct: 340 PADEEVVEVEPMDEE----LKIQEELQALSEKESGRKKRERRRENEKKQREIIRMQLHMT 395
Query: 358 LKGDLG---PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
+ ++G N + MF L + +D IT K + ++D
Sbjct: 396 VPTEIGMEQAGPNGEGSMFGLKAVDKLGAVDKITKGKMAILTEAD 440
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPVGSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ K WK VLHD
Sbjct: 82 AIPRVISFQSDITTDKC--RATIRSHFKTWKADTVLHD 117
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAK RKK + A+R++K++KK L + +++ EKA +I
Sbjct: 718 LNARPIKKVREAKDRKKFKAAQRLEKLRKKSALLQDEEGMTEKEKATSI 766
>gi|302416843|ref|XP_003006253.1| AdoMet-dependent rRNA methyltransferase SPB1 [Verticillium
albo-atrum VaMs.102]
gi|261355669|gb|EEY18097.1| AdoMet-dependent rRNA methyltransferase SPB1 [Verticillium
albo-atrum VaMs.102]
Length = 718
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 202/378 (53%), Gaps = 60/378 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKTWKADTVLHDGAPNVGTAWNQDSFNQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK F G + + +++K K GY LYK P S+FI+ + P +L
Sbjct: 212 DPKAVFASSGQAPHEAK-VYNPEIKKRKRDGYEEGDYTLYKEAPASEFIQTDDPLAILG- 269
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
GY K + Q V L A
Sbjct: 270 ------GY------------NKLTWAQPKNGDVALAA----------------------- 288
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI+ CC+D++VLGR+D + LLKW KV +K++E EE
Sbjct: 289 --MSKLPETTDEIRLCCEDLKVLGRRDFKILLKWRLKVREIFGLSTKKDDEPV----PEE 342
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
VED MDEE +K +E++ ++D E + KR++++ ++++ K +M + M+ D
Sbjct: 343 VAEVED-MDEE----LKIQEELQAMRDRESTKKKRERRRENEKKQKEIVRMQMNMMAPMD 397
Query: 362 LGPTENDD----EEMFKL 375
+G E D + MF+L
Sbjct: 398 IG-MEQDGPMGADSMFRL 414
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLIDLCAAPGSWCQVAAETMPVNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 AIPKCITFQSDITTDKC--RATLRQHLKTWKADTVLHD 117
>gi|169779173|ref|XP_001824051.1| AdoMet-dependent rRNA methyltransferase spb1 [Aspergillus oryzae
RIB40]
gi|238499797|ref|XP_002381133.1| rRNA methyltransferase Spb1, putative [Aspergillus flavus NRRL3357]
gi|83772790|dbj|BAE62918.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692886|gb|EED49232.1| rRNA methyltransferase Spb1, putative [Aspergillus flavus NRRL3357]
gi|391874235|gb|EIT83156.1| putative SAM-dependent rRNA methyltransferase SPB1 [Aspergillus
oryzae 3.042]
Length = 802
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 205/397 (51%), Gaps = 61/397 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP +LD KF
Sbjct: 152 GTFVTKVFRSKDYNALLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRLDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F EL A + + +K K GY +K +PV++FI P +L
Sbjct: 212 DPKHVFAELADPTPNNEARVFDPEKKKRKRDGYEEGDWTQFKEIPVTEFINTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
++ L LNR E
Sbjct: 272 QYNKLSFQQPLNGDIALSTLNRLEE----------------------------------- 296
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG--E 299
TT EI++CC+D++VLG+K+ RNLL+W + EK K+GG+ +
Sbjct: 297 ---------TTDEIRKCCEDLKVLGKKEFRNLLRWRLKVR----EKFGLVVKKGGQAKKD 343
Query: 300 EEEKVVE-DEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
E E+V E MDEE ++EL + KE + K E R+E ++K+K++ + + + M++
Sbjct: 344 EPEEVAEIAPMDEELAIQEELQRLREKESSKAKKERRKENEKKRKEIVRMQMHMTTPMDI 403
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
M G LG D+ F L ++ D I A K
Sbjct: 404 GMEQIGPLG-----DDAPFSLKRVEREGARDTIAAGK 435
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPAQSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RTTIRQHLKHWKADTVLHD 117
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A++++K++KK L + +S+ +K++ I
Sbjct: 692 INARPIKKVMEAKGRKKFKAAQKLEKLRKKSALLADDEALSERDKSQAI 740
>gi|396485593|ref|XP_003842209.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Leptosphaeria maculans JN3]
gi|312218785|emb|CBX98730.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Leptosphaeria maculans JN3]
Length = 840
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 217/407 (53%), Gaps = 73/407 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LK K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 89 DITTDKCRATLRQHLKHLKADAVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLAEG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP LD KF
Sbjct: 149 GTFVTKIFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKNLDPKFL 208
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D + F EL E N KKK+ K GY +K +PVS+FI+ P
Sbjct: 209 DARSVFAELADPTPNNEAKVFNPEKKKR----KRDGYEEGDWTQFKEVPVSEFIQTTDPI 264
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L LN K F QK P G + VA
Sbjct: 265 AMLGS------------------LN-KLSFEQK----------PNGDIAVA--------- 286
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD------EKTEKEKEE 291
++ K P TT EI++CC D++VLGR D + LL+W + D +K E+E++E
Sbjct: 287 ------TIDKLPETTKEIRDCCADLKVLGRADFKRLLRWRLKVRDIFGFSAKKKEEEEKE 340
Query: 292 EKEGGEGEEEEKVVE-DEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTK--- 347
+ + GE +E ++V E ++MDEE MK +E+E LK+++ + ++K++++ ER +
Sbjct: 341 KVKDGEAKEGDEVAEIEDMDEE----MKIQEELERLKEKDSK-ARKKQRRIENERKQKEI 395
Query: 348 LQEKMNLKMLLKGDL---GPTENDDEEMFKLSQIRTTDQLDLITASK 391
++ +MN+ + L GP +D MF L + L I K
Sbjct: 396 IRMQMNMATPFEIGLEQSGPAGDDG--MFALKAVDKAGALSKIAKGK 440
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 197 KLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQ 256
KLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K + Q
Sbjct: 28 KLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPAGSLIVGVDLAPIKAIPRCITFQ 87
Query: 257 E--CCKDIRVLGRKDVRNLLKWWKVLHD 282
R R+ +++ LK VLHD
Sbjct: 88 SDITTDKCRATLRQHLKH-LKADAVLHD 114
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EA+ARKK + A+RM+K+KKK L + +++ EKA++I
Sbjct: 729 LNARPIKKVREAQARKKFKAAQRMEKLKKKSALLADEEGMTEKEKAQSI 777
>gi|358401197|gb|EHK50503.1| hypothetical protein TRIATDRAFT_157949 [Trichoderma atroviride IMI
206040]
Length = 826
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 213/406 (52%), Gaps = 55/406 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWAQDSFNQAELALQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ Y AP +D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKHMDPRFL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F EL GA + +V+K K GY +K + S FI+ P +L
Sbjct: 212 DPRSVFAELSGAAPNNEAKVYNPEVKKRKRDGYEEGDWTQFKEVSASAFIQTNDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+ K F Q AP G + +A
Sbjct: 272 SSN-------------------KISFAQ----------APNGDIALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ KHP TT EI++CC D++VLGRK+ + LLKW + + K K E
Sbjct: 290 --ALDKHPETTPEIRQCCDDLKVLGRKEFKLLLKWRLRVREIFGLSTK---KSTAPEVSE 344
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E V + MDEE ++ +E++ +KD E + KR+K+K ++++ + +M L M+ D
Sbjct: 345 EVVGVESMDEE----LRIQEELQAMKDSENSKKKREKRKENEKKRREIIRMQLNMMAPMD 400
Query: 362 LGPTENDDE---EMFKLSQIRTTDQLDLITASKPEVFADSDEEHID 404
+G E+ + MF L ++ T+ ++ T K V ++S + + D
Sbjct: 401 IGMEESGPQGEGAMFSLKRMDKTNGMNRFTRGKMAVVSNSKDSNPD 446
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPVNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC--RATIRQHLKTWKADTVLHD 117
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAKARKK + A+R +K+KKK + L +++ EKA +I
Sbjct: 717 FNARPIKKVREAKARKKFKTAQRFEKLKKKSDMLAADEGMTEKEKAESI 765
>gi|429862210|gb|ELA36867.1| et-dependent rrna methyltransferase spb1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 838
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 220/442 (49%), Gaps = 92/442 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRATIRSHLKTWKADCVLHDGAPNVGTAWNQDSFNQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCKGYKAPKRIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP+ F EL +D N K +V+K K GY +K + S+FI+ P +
Sbjct: 212 DPRAVFAEL--KDAAPNNEAKVYNPEVKKRKREGYEEGDYTQFKAVSASEFIQTVDPIAI 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L A ++ F Q + V L A
Sbjct: 270 LGSANQLS-------------------FDQPNNGDVALAA-------------------- 290
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV-----LHDEKTEKEKE-EE 292
+ K P T EI+ CC D++VLGRK+ + LLKW KV +KTEK K +E
Sbjct: 291 -----LDKLPETNEEIRRCCADLKVLGRKEFKMLLKWRLKVREIFGFPTKKTEKAKSLQE 345
Query: 293 KEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKD--------EERRELKRKKKKVSKE 344
+ G EE VED MDEE ++ +E+E LK+ E R+E ++K+K + +
Sbjct: 346 QVAG---EEVAEVED-MDEE----LRIQEELEALKNKDDSKKRKERRKENEKKQKDIVRM 397
Query: 345 RTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHID 404
+ + M++ M G LGP + MF L + ++ I + +
Sbjct: 398 QLNMVAPMDIGMEQSGPLGP-----DSMFALKTVDKAGGVNKIAKGRMAI---------- 442
Query: 405 IVPKKIKYNVEKSELDDSGLYY 426
+K N +K + DSG+ Y
Sbjct: 443 -----LKENEKKKQEQDSGISY 459
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+V VDLCAAPG W QVA + ++I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSRVVVDLCAAPGSWCQVAAETCPVGALIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R+ LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRSHLKTWKADCVLHD 117
>gi|346322955|gb|EGX92553.1| AdoMet-dependent rRNA methyltransferase spb1 [Cordyceps militaris
CM01]
Length = 827
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 252/506 (49%), Gaps = 79/506 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LKTWK D VLHDG+PNVG WV D+++Q L L A+KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDSFNQAELALQAMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF V +TKP +SR SAEIFVVC+ Y AP ++D +
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTYVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPRLL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F EL GA + +V+K K GY LYK +P S+FI+ P +L
Sbjct: 212 DPRSVFAELAGATPNNEAKVYNPEVKKRKRDGYDEGDYTLYKQVPASEFIQTMDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+ K F Q P G + +A
Sbjct: 272 SSN-------------------KLTFQQ----------PPNGDVALA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD--EKTEKEKEEEKEGGEGE 299
++ K P TT EI+ CC D+++LGR+D + LLKW + + KEK E
Sbjct: 290 --ALDKLPETTPEIRTCCSDLKILGRRDFKLLLKWRLRVREIFGLATKEKAVAAASEEVA 347
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
E E++ E+ EEE + M+ ++ + K E+RRE ++K+K++ + + + M++ M
Sbjct: 348 EVEEMDEELKIEEELQAMR-DRDGSKKKREKRRENEKKQKEIVRMQMNMISPMDIGMEEA 406
Query: 360 GDLGPTENDDEEMFKLSQIRTTD--------QLDLITASKP--EVFADSDEEHIDIVPKK 409
G +G + MF L T+ ++ I+ +KP E DS+++ D+ +
Sbjct: 407 GPVG-----EGSMFTLKSADKTEAMRRLNRGKMATISDAKPVLEQGPDSNDDESDLEEDR 461
Query: 410 IKYNVE---------KSELDDSGLYYKNPD---DSDLEFESSSEDENDVEKKLVEEE--F 455
++ +++ K+E D K + D + E S+ E E L EE+
Sbjct: 462 LERDLDSMYENFKERKAEYDAKYRAKKAREQRGDEEWEGLSAGEGEESDSSALEEEDEYS 521
Query: 456 DTDEEDGL--GKLLRYWEKSYNAASL 479
+DE+DG G L R+ E NA L
Sbjct: 522 SSDEDDGPAEGLLKRFEEDQRNANGL 547
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RA+FKL+QLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D S +K
Sbjct: 22 KGYRARASFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVASEVMPVNSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRQHLKTWKADTVLHD 117
>gi|448086080|ref|XP_004196015.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
gi|359377437|emb|CCE85820.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
Length = 814
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 215/407 (52%), Gaps = 62/407 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTD C+ + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTDDCKSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVDNLSNG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY SLLW+F+Q F RV +TKP +SR SAEIFVVC+ + AP K+D +
Sbjct: 154 GTFVTKIFRSRDYNSLLWVFQQFFDRVEATKPPSSRNVSAEIFVVCKGFKAPKKIDPRLL 213
Query: 123 DPKYAFKELG-AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK F+ELG + D + + +K K GY LY +PV FI+ + P LL
Sbjct: 214 DPKEVFEELGTSTDNNEAKVFNPEKKKRKRDGYEEGDYTLYHEVPVLDFIKCDEPIKLLG 273
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
++ + + +K+++ R F
Sbjct: 274 STNKLLEPSKDDNEWKILKKIRAF------------------------------------ 297
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
T E+ EC KD++VLG+K+ + +LK+ K + EK++EK
Sbjct: 298 ----------TPELLECMKDLKVLGKKEFKLILKFRKSAREILGLDEKDDEKP------- 340
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
VVE E E++++ +E++E++D++ ++LKR KK ++ + K ++M + ML +
Sbjct: 341 --VVESEPLTEDQQI---DQELKEMRDKQAQKLKRSKKHANEVKQKEIQRMQMNMLTDMN 395
Query: 362 LG--PTENDDEEMFKLSQIRTTDQLDLITASKPE-VFADSDEEHIDI 405
+G +N E +F L T +L+ ++ K + + D+D + D+
Sbjct: 396 IGIDAAQNGSESLFNLKTAAKTGELEKLSKGKRQMILKDNDIRNNDV 442
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R+AFK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSAFKVIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKVCPVNSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRVLGRKD-VRNLLKWWK---VLHD 282
K + +Q DI K +R +K WK VLHD
Sbjct: 83 KPLPNCITVQA---DITTDDCKSKLRGYMKTWKADTVLHD 119
>gi|367012579|ref|XP_003680790.1| hypothetical protein TDEL_0C06900 [Torulaspora delbrueckii]
gi|359748449|emb|CCE91579.1| hypothetical protein TDEL_0C06900 [Torulaspora delbrueckii]
Length = 829
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 225/430 (52%), Gaps = 74/430 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY L+W+F+QLF +V +TKP ASR SAEIFVVC+ Y AP +LD +
Sbjct: 154 GTFVTKVFRSKDYNKLIWVFQQLFDKVEATKPPASRNVSAEIFVVCRGYKAPKRLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K + GY ++LY + +F++ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMEAKVYNPEKKVRKRQ--GYEDGDHLLYHETSILEFVKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L Q+N KF + K W V K
Sbjct: 270 TMLG------------------QMN-KFTIDEDEK----------DWKIVKK-------- 292
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
LK TT E+ EC KD++VLG+KD + LL+W K + G
Sbjct: 293 --------LKQ--TTNELYECVKDLKVLGKKDFKMLLRWRKAAAEIL-----------GY 331
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
G+E+EK +E+ +E+E ++ KE+++L++++R KR+++K ++ + K +MN+ ML
Sbjct: 332 GKEDEKTSIEEVPLDEEEQIE--KELQQLQEKQRLNQKRERRKKNEMKQKELTRMNMNML 389
Query: 358 LKGDLGPTEND--DEEMFKLSQIRTTDQLD-LITASKPEVFADSDEEHIDIVPKKIKYNV 414
D+G D E +F L T LD L K +F DS+ + I+ V
Sbjct: 390 TPNDIGIEAADVGRESVFNLKTAEKTGILDQLAKGKKRMIFKDSENARDSDI--HIEDGV 447
Query: 415 EKSELDDSGL 424
+ ++ DD+GL
Sbjct: 448 KFTDKDDAGL 457
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAAKLCPINSLIVGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPIPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R R++K+KKK +++ D S+ +KA I
Sbjct: 717 LNARPIKKVAEAKARKKMRSLARLEKIKKKAGVIVDDSDKSEKDKADEI 765
>gi|448081600|ref|XP_004194928.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
gi|359376350|emb|CCE86932.1| Piso0_005455 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 215/407 (52%), Gaps = 62/407 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTD C+ + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTDDCKSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVDNLSNG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY SLLW+F+Q F RV +TKP +SR SAEIFVVC+ + AP K+D +
Sbjct: 154 GTFVTKIFRSRDYNSLLWVFQQFFDRVEATKPPSSRNVSAEIFVVCKGFKAPKKIDPRLL 213
Query: 123 DPKYAFKELGAE-DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK F+ELGA D + + +K K GY +LY +PV FI+ + P LL
Sbjct: 214 DPKEVFEELGASTDNSEAKVFNPEKKKRKRDGYEEGDYILYHEVPVLDFIKCDEPIKLLG 273
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
++ + + +K+++ R F
Sbjct: 274 STNKLLEPSKDDNEWKILKKIRAF------------------------------------ 297
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
T E+ EC KD++VLG+K+ + +LK+ K + EK++EK
Sbjct: 298 ----------TPELLECMKDLKVLGKKEFKLILKFRKSAREILGLDEKDDEKP------- 340
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
VVE E E++++ +E++E+++++ ++LKR KK ++ + K ++M + ML +
Sbjct: 341 --VVESEPLTEDQQI---DQELKEMREKQAQKLKRSKKHANEIKQKEIQRMQMNMLTDMN 395
Query: 362 LG--PTENDDEEMFKLSQIRTTDQLDLITASKPE-VFADSDEEHIDI 405
+G +N E +F L T +L+ ++ K + + D+D + D
Sbjct: 396 IGIDAAQNGSESLFNLKTAAKTGELEKLSKGKRQMILKDNDMRNNDF 442
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R+AFK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSAFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKVCPVNSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRVLGRKD-VRNLLKWWK---VLHD 282
K + IQ DI K +R +K WK VLHD
Sbjct: 83 KPLPNCITIQA---DITTDDCKSKLRGYMKTWKADTVLHD 119
>gi|378726806|gb|EHY53265.1| hypothetical protein HMPREF1120_01459 [Exophiala dermatitidis
NIH/UT8656]
Length = 835
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 197/368 (53%), Gaps = 59/368 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I K K D VLHDG+PNVG+ WV DA+ Q L L ++KLA+ LKEG
Sbjct: 92 DITTDKCRATIRTHFKHLKADTVLHDGAPNVGVAWVQDAFSQAELVLQSMKLATEFLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNALLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F E+ E N KKK+ K GY +K +PVS+FI P
Sbjct: 212 DPKHVFAEVQEPTPNNEAKVFNPEKKKR----KREGYEEGDWTQHKEIPVSEFIHTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +P G + +A + +
Sbjct: 268 AILGTVN-------------------KLSFEQ----------SPNGDLALAALDRL---- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE--KTEKEKEEEKEG 295
P TT EI+ CC D++VLG+K+ R LL+W + D+ + K K+E++
Sbjct: 295 -----------PETTEEIRMCCADLKVLGKKEFRTLLRWRLKVRDKFGMSAKAKKEQEAE 343
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
+ E EE + MDEE +K +E++ LK+++ +E ++ ++K ++ + K +M +
Sbjct: 344 NKEEGEEVAEVESMDEE----LKIQEELQRLKEQDSKEKRKARRKENERKRKEIIRMQMH 399
Query: 356 MLLKGDLG 363
M D+G
Sbjct: 400 MTTPHDIG 407
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+V +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSRVLLDLCAAPGSWCQVAAETMPAQSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K K VLHD
Sbjct: 82 PIPHVITFQSDITTDKC--RATIRTHFKHLKADTVLHD 117
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K +N RPI+KV EAK RKK R A R++K++KK L+E +S+ +KA +I
Sbjct: 718 REKLRALNARPIKKVREAKGRKKMRAAARLEKLRKKSALLLEDEGISEKDKAASI 772
>gi|242763691|ref|XP_002340625.1| rRNA methyltransferase Spb1, putative [Talaromyces stipitatus ATCC
10500]
gi|218723821|gb|EED23238.1| rRNA methyltransferase Spb1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 208/397 (52%), Gaps = 63/397 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + +K K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L+EG
Sbjct: 92 DITTDKCRSTLRSHVKHLKADTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLREG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP +LD KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRLDPKFL 211
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K + V++FI P
Sbjct: 212 DPRHVFAELADPTPNNEAKVFNPEKKKR----KREGYEEGDYTQHKEISVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G +F+ +P G + +A
Sbjct: 268 AIL--------GTYHTLSFQ---------------------QSPSGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + TT EI++CC+D+RVLG+K+ RNLLK W++ EK +++K E
Sbjct: 290 ------TLERLEETTNEIRKCCEDLRVLGKKEFRNLLK-WRLKVREKFGLTVKKKKTQDE 342
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
GEE +V MD+E + +E++ L+D E + K++++K ++ + K +M + M+
Sbjct: 343 GEEVAEVA--PMDDE----LAIQEELQRLRDNENAQRKKERRKENERKRKDIVRMQMHMI 396
Query: 358 LKGDLGPTE---NDDEEMFKLSQIRTTDQLDLITASK 391
D+G + D MF + + + D I + K
Sbjct: 397 TPTDIGMEQAGIGGDNTMFAMKAVNRENAADKIASGK 433
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAGSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQE--CCKDIRVLGRKDVRNLLKWWKVLHD 282
+ Q R R V++ LK VLHD
Sbjct: 82 PIPRVITFQSDITTDKCRSTLRSHVKH-LKADTVLHD 117
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV EAKARKK + A+R++K++KK L E VS+ +KA+ I
Sbjct: 687 INARPIKKVREAKARKKFKVAQRLEKLRKKSALLAEDESVSEKDKAQAI 735
>gi|196011812|ref|XP_002115769.1| hypothetical protein TRIADDRAFT_59807 [Trichoplax adhaerens]
gi|190581545|gb|EDV21621.1| hypothetical protein TRIADDRAFT_59807 [Trichoplax adhaerens]
Length = 807
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 214/411 (52%), Gaps = 79/411 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTD C+ AI +EL TWK D VLHDG+PNVG WV DA+ Q LTL AL+LA +LK G
Sbjct: 92 DITTDACKQAIKKELHTWKADSVLHDGAPNVGQAWVQDAFSQAQLTLSALRLACQLLKRG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFRSKDY SL+W+F+QLF++VH+TKPQ ++AP K+D KF
Sbjct: 152 GCFITKVFRSKDYYSLMWVFQQLFKKVHATKPQG--------------FLAPDKIDPKFL 197
Query: 123 DPKYAFKELGAE--DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D K+ FK++ E K+N + ++ + GYP + + L+ + PV+ FI E L
Sbjct: 198 DSKHIFKDIETETKQNKINLMFSEKRKDRNRAGYPDNKHTLFTSTPVTDFITSEN---YL 254
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
H + +S+ + F
Sbjct: 255 DH-------------------------------------------------LASSNTLTF 265
Query: 241 DDESVL--KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD--------EKTEKEKE 290
D++S++ KHP TT EI+ C+DI+VLGRK++R L+KW + D +T+K +
Sbjct: 266 DEDSLIIAKHPLTTEEIKTYCQDIKVLGRKEIRTLIKWRSDIRDFYEQKATASETKKTEN 325
Query: 291 EEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+E G E +++E + +++E E E K + + +KR+++K + + K +E
Sbjct: 326 DESAGVESDDDEDAAKKKIEEFENEEASERKSHLLIHIQNMMMIKRQRRKRMQLKRKARE 385
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEE 401
+ LKM + D G ++D +F LS I +L + + + + D DE+
Sbjct: 386 RQLLKMKV-PDSGINLSEDNSLFSLSTITDPKKLSNVNSGEMMLGDDEDED 435
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 15/102 (14%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR+R+AFKLIQLNRKF+FL+ S+V VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRARSAFKLIQLNRKFQFLETSRVLVDLCAAPGGWLQVASRFMPISSLIVGVDLVTIKP 82
Query: 249 PSTTVEI-----QECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + + CK + ++ L WK VLHD
Sbjct: 83 IPNVITLTGDITTDACK-------QAIKKELHTWKADSVLHD 117
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
+ E +KK EIN RPI+KV EAKARKK + R++++M+KK E +++ D +D EK I+
Sbjct: 691 IQEQKKKLQEINARPIKKVAEAKARKKMKTLRKVERMRKKAEAILDTSDATDREKMLQIK 750
Query: 540 A 540
+
Sbjct: 751 S 751
>gi|327297282|ref|XP_003233335.1| rRNA methyltransferase [Trichophyton rubrum CBS 118892]
gi|326464641|gb|EGD90094.1| rRNA methyltransferase [Trichophyton rubrum CBS 118892]
Length = 834
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 200/393 (50%), Gaps = 71/393 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 114 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 173
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 174 GSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 233
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 234 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKVLPATEFINTIDPI 289
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +PGG + +A
Sbjct: 290 SILGSYN-------------------KLTFTQ----------SPGGDLALA--------- 311
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EI+ CC+D++VLG+KD R LL+W + EK K+G +
Sbjct: 312 ------TLERLPETTNEIRMCCEDLKVLGKKDFRQLLRWRIKVR----EKFGLAVKKGPK 361
Query: 298 GEEE-EKVVEDEMDEEEKELMKATKEIEEL-----KDEERRELKRKKKKVSKERTKLQEK 351
EE E++ E E +EE L + + + E K E R+E +RK+K + + + +
Sbjct: 362 NEEATEEIAEVEPMDEELALQEDLRRMHERETSKNKRERRKENERKRKDIVRLQMNMTTP 421
Query: 352 MNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQL 384
+ M G LG D MF+L RT ++L
Sbjct: 422 KEIGMEQAGPLG-----DGAMFRL---RTAEKL 446
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D S +K
Sbjct: 44 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPSQSLIVGVDLSPIK 103
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 104 PIPKVITFQSDITTDKC--RATIRQHFKTWKADTVLHD 139
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 718 REKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 772
>gi|302908896|ref|XP_003049953.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730890|gb|EEU44240.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 833
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 227/462 (49%), Gaps = 89/462 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + KTWK D VLHDG+PNVG W D+++Q L L A+KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHFKTWKADTVLHDGAPNVGTAWAQDSFNQAELALQAMKLATEFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ Y AP K+D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKKIDPRFL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F EL GA + +V+K K GY +K +P S+FI+ P +L
Sbjct: 212 DPRAVFAELTGATPNNEAKVYNPEVKKRKRDGYEDGDYTQFKEMPASEFIQTTDPIAVLG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q V L A
Sbjct: 272 SYN-------------------KLTFQQPLNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV--LHDEKTEKEKEEEKEGGEG 298
+ K P TT EI+ CC D+RVLGRKD + LLKW KV + KT KE
Sbjct: 291 ---LDKLPETTPEIRNCCDDLRVLGRKDFKLLLKWRLKVREIFGFKT-------KETATE 340
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E EE + MDEE +K +E++ +KD+E ++ KR+K+K ++++ + +M L M
Sbjct: 341 EPEEVAEVESMDEE----LKIQEELQAMKDKENKKKKREKRKENEQKQREIVRMQLNMTA 396
Query: 359 KGDLGPTEN---DDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVE 415
D+G E+ + +F L ++ TD + + K + A S +
Sbjct: 397 PMDIGMEESGPIGEGAIFSLKKVDKTDAMRRLNRGKMAIVAGS--------------TAK 442
Query: 416 KSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDT 457
K + DSGL S+ DE+D E+ +E E D+
Sbjct: 443 KDQ--DSGLG-----------SSAETDESDAEEDRLERELDS 471
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKL+QLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAEVMPPNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R K WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIRQHFKTWKADTVLHD 117
>gi|402085558|gb|EJT80456.1| AdoMet-dependent rRNA methyltransferase SPB1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 852
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 206/388 (53%), Gaps = 63/388 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WKVD VLHDG+PNVG WV D+++Q LTL ++KLA+ L EG
Sbjct: 92 DITTEKCRATIKQHLKGWKVDTVLHDGAPNVGTAWVQDSFNQAELTLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLWIF QLF +V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWIFNQLFTKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F+EL A+ N K K +V+K K GY +K + S+FI+ P +L
Sbjct: 212 DPRAVFEEL-ADPTPNNEAKVYKPEVKKRKRGGYEDGDYTQFKEISASQFIQTTDPIEIL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q NR F+Q P G + +A
Sbjct: 271 G------------------QYNR-LSFVQ----------PPNGDVALA------------ 289
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD-----EKTEKEKEEEKEG 295
++ K P TT EI+ CC+D++VLGRK+ + LLKW + + K +KE
Sbjct: 290 ---ALDKLPETTGEIRICCEDLKVLGRKEFKMLLKWRLAVREIFGFPTKKSAKKEAAAAT 346
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKD----EERRELKRKKKKVSKERTKLQEK 351
EE + MDEE MK ++++ LKD +++RE +R ++ KE ++Q
Sbjct: 347 AAAAAEEVAEVESMDEE----MKIQEDLQALKDKVASKKKRERRRDNERKQKEIVRMQMH 402
Query: 352 MNLKMLLKGD-LGPTENDDEEMFKLSQI 378
M M + D GP D MF L +
Sbjct: 403 MVAPMDIGLDQAGPAGED--AMFALKAV 428
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+K+KV +DLCAAPG W QVA + M S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKTKVLLDLCAAPGSWCQVAAETMPMGSLIIGVDLSPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R ++ LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC-------RATIKQHLKGWKVDTVLHD 117
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAK RKK + A+R++K+KKK + L+ +++ EKA +I
Sbjct: 740 FNARPIKKVREAKGRKKMKAAQRLEKLKKKSDLLVNEEGMTEKEKAESI 788
>gi|407927769|gb|EKG20655.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Macrophomina phaseolina
MS6]
Length = 831
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 204/380 (53%), Gaps = 53/380 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LKT K D VLHDG+PNVG WV DA+ Q LTL ++KLA+ L+EG
Sbjct: 92 DITTDKCRATLRQHLKTLKADAVLHDGAPNVGTAWVQDAFTQAELTLQSMKLATEFLREG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF++V +TKP +SR SAEIFVVC+ + AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFEKVEATKPPSSRNVSAEIFVVCRGFRAPKHLDPKFV 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP++ F EL A A + +V+K K GY +K VS+FI+ P +L
Sbjct: 212 DPRHVFAELAAPAPNNEAKVFNPEVKKRKREGYEEGDWTQFKEATVSEFIQTTDPIAMLG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F QK P G + A
Sbjct: 272 SMN-------------------KLSFEQK----------PNGDIAQA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ K P TT EI+ CC D++VLGR D + LL+ W++ E +++ +EE
Sbjct: 290 --TIAKLPETTAEIRACCDDLKVLGRSDFKRLLR-WRLKVREIFGFSSKQKAAKEAEKEE 346
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E + MDEE ++ +E++ +K+ E + +++++K ++ + K ++M L M +
Sbjct: 347 EVAEIEPMDEE----LQVQEELQRMKEHEDSKKRKERRKENERKQKEIQRMQLHMTTPME 402
Query: 362 LGPTE---NDDEEMFKLSQI 378
+G + N ++ +F+L +
Sbjct: 403 IGMEQVGPNGEDSLFQLKSV 422
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVAAEVMPPNSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK K VLHD
Sbjct: 82 PIPRCITFQSDITTDKC--RATLRQHLKTLKADAVLHD 117
>gi|62914003|gb|AAH00131.2| FTSJ3 protein, partial [Homo sapiens]
Length = 734
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 202/383 (52%), Gaps = 79/383 (20%)
Query: 25 VLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQ 84
VL+DG+PNVG +WV+DAY Q LTL AL+LA L GG F+TKVFRS+DY LLWIF+Q
Sbjct: 1 VLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQ 60
Query: 85 LFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKLNALKKK 144
LF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KFFDPK+AFKE+ + + L K
Sbjct: 61 LFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELVTK 120
Query: 145 QVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRK 204
+ K KA GY LY V+ F+ P L A+E
Sbjct: 121 K--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASE------------------- 159
Query: 205 FEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRV 264
I DDE + +HP+TT +I+ CC+DIRV
Sbjct: 160 ---------------------------------IMVDDEELAQHPATTEDIRVCCQDIRV 186
Query: 265 LGRKDVRNLLKWWKVLHDEKTEKEKEEEKE-------------------GGEGEEEEKVV 305
LGRK++R+LL W L +K KE+ K G ++ K
Sbjct: 187 LGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEGDEEDSTAGTTKQPSK-- 244
Query: 306 EDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPT 365
+EEE+E + + + E+K +E ELKRKKKK+ +E+ K +E++ LKM L G +
Sbjct: 245 ---EEEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKMDLPG-VSIA 300
Query: 366 ENDDEEMFKLSQIRTTDQLDLIT 388
+ + MF L IR L+ +T
Sbjct: 301 DEGETGMFSLCTIRGHQLLEEVT 323
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 611 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 670
Query: 540 A 540
+
Sbjct: 671 S 671
>gi|296415586|ref|XP_002837467.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633339|emb|CAZ81658.1| unnamed protein product [Tuber melanosporum]
Length = 528
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 214/399 (53%), Gaps = 53/399 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + LKTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L EG
Sbjct: 92 DITTDKCRATLRGHLKTWKADTVLHDGAPNVGTAWVQDAFTQAELVLQSLKLATKFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+D+ +L+W+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D KF
Sbjct: 152 GTFVTKVFRSRDFNNLMWVFNQLFTKVEATKPPSSRSVSAEIFVVCKGYKAPKRVDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F+EL A + ++ K K GY + +K PV+KFIE P +L
Sbjct: 212 DPRTVFEELPDPTPNNEAKVFNPEIRKRKRDGYEEGDYLQFKEAPVNKFIEATDPIQML- 270
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G +R +F+ RK GG + +A
Sbjct: 271 -------GSLNRLSFE----ERK-----------------GGDLAIA------------- 289
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
++ K P TT EI+ CC+D+RVLG+K+ R LL+ W++ EK ++ E E
Sbjct: 290 --AISKMPETTKEIRYCCEDLRVLGKKEFRALLR-WRLSVREKFGLAVKKTNAMVESTEI 346
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
++V MD+E ++ +E+E LK +E E +R +++ ++ + K ++ L M D
Sbjct: 347 AEIV--PMDKE----IQIEEELERLKMKEAGEKRRSRRRENERKQKEIVRLQLHMTTPTD 400
Query: 362 LGPTEN-DDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
+G + ++E MF + I LD IT K + + D
Sbjct: 401 IGLGQGVENESMFAIKNIDRAGALDKITKGKMSLVIEED 439
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M +S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVAAECMPVNSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ Q DI R +R LK WK VLHD
Sbjct: 82 AIPRVITFQS---DITTDKCRATLRGHLKTWKADTVLHD 117
>gi|336473098|gb|EGO61258.1| hypothetical protein NEUTE1DRAFT_127919 [Neurospora tetrasperma
FGSC 2508]
gi|350293650|gb|EGZ74735.1| AdoMet-dependent rRNA methyltransferase spb-1 [Neurospora
tetrasperma FGSC 2509]
Length = 832
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 206/402 (51%), Gaps = 57/402 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK DVVLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRATIRSHLKTWKADVVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D K
Sbjct: 152 GTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKLL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F+++ G + +V+K K GY +K + S+FI P +L
Sbjct: 212 DPRSVFEDVAGPAPNNEAKVYNPEVKKRKREGYEEGDYTQFKEISASEFINTVDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
Q N K F Q V L A
Sbjct: 272 ------------------QYN-KLSFEQPKNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI+ CC D++VLGRK+ + LLKW + + K+ +K +E
Sbjct: 291 ---LDKLPETTEEIRLCCADLKVLGRKEFKLLLKWRLKVREIFGFPSKKTQK---AAVDE 344
Query: 302 EKVVEDEMDEE---EKELMKAT-KEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E V + MDEE ++EL + KE + K E RRE ++K+K++ + + + M++ M
Sbjct: 345 EVAVVENMDEELRIQEELQRIKEKETSKKKRERRRENEKKQKEIVRMQMNMTAPMDIGME 404
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
+G G + MF+L I L+ I K V +++
Sbjct: 405 QEGPRG-----EGAMFRLKTIDQNAALNKIAKGKMAVIKEAE 441
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QV + M +SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMPTNSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R+ LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRSHLKTWKADVVLHD 117
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAKARKK +QA+R++K+KKK + L +S+ EKA +I
Sbjct: 725 NARPIKKVAEAKARKKFKQAQRLEKLKKKADMLAGDDGMSEKEKAASI 772
>gi|119174478|ref|XP_001239600.1| hypothetical protein CIMG_09221 [Coccidioides immitis RS]
gi|392869799|gb|EAS28325.2| AdoMet-dependent rRNA methyltransferase spb1 [Coccidioides immitis
RS]
Length = 816
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 212/409 (51%), Gaps = 65/409 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDAFSQAELALQSLKLATEFLVAG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRMDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPRHVFAELQDPTPNNEAKVFNPEKKKR----KREGYEEGDYTQHKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + + ++ +P G + +A
Sbjct: 268 AIL-------------GTYNTLSFHQ----------------SPSGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EI+ CC+D++VLG+K+ R LL+W + ++ K+ K+
Sbjct: 290 ------TLERLPETTDEIRSCCEDLKVLGKKEFRTLLRWRLKVREQFGLAVKKGAKKA-- 341
Query: 298 GEEEEKVVEDEMDEEE--KELMKATKEIEEL--KDEERRELKRKKKKVSKERTKLQEKMN 353
E EE + MDEE +E M+ +E E K E RRE +RK+K++ + + + +
Sbjct: 342 EESEEVAEIEPMDEELAIQEEMQRLQEHESSRKKKERRRENERKQKEIVRLQMHMITPTD 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK-PEVFADSDEE 401
+ M G +G + MF + I IT+ K +V ++ DEE
Sbjct: 402 IGMEQSGPMG-----EGAMFSIKPITREGATRNITSGKMVDVQSEEDEE 445
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPTESLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTDKC--RATIRQHLKTWKADTVLHD 117
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK RKK ++A+R++K+KKK L E VS+ +KA+ I
Sbjct: 700 REKMRAINARPIKKVREAKGRKKFKEAQRLEKLKKKSALLAEDEGVSERDKAQTI 754
>gi|303314341|ref|XP_003067179.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106847|gb|EER25034.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 816
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 212/409 (51%), Gaps = 65/409 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDAFSQAELALQSLKLATEFLVAG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRMDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPRHVFAELQDPTPNNEAKVFNPEKKKR----KREGYEEGDYTQHKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + + ++ +P G + +A
Sbjct: 268 AIL-------------GTYNTLSFHQ----------------SPSGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EI+ CC+D++VLG+K+ R LL+W + ++ K+ K+
Sbjct: 290 ------TLERLPETTDEIRNCCEDLKVLGKKEFRTLLRWRLKVREQFGLAVKKGAKKA-- 341
Query: 298 GEEEEKVVEDEMDEEE--KELMKATKEIEEL--KDEERRELKRKKKKVSKERTKLQEKMN 353
E EE + MDEE +E M+ +E E K E RRE +RK+K++ + + + +
Sbjct: 342 EESEEVAEIEPMDEELAIQEEMQRLQEHESSRKKKERRRENERKQKEIVRLQMHMITPTD 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK-PEVFADSDEE 401
+ M G +G + MF + I IT+ K +V ++ DEE
Sbjct: 402 IGMEQSGPMG-----EGAMFSIKPITREGATRNITSGKIVDVQSEEDEE 445
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPTESLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTDKC--RATIRQHLKTWKADTVLHD 117
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK RKK ++A+R++K+KKK L E VS+ +KA+ I
Sbjct: 700 REKMRAINARPIKKVREAKGRKKFKEAQRLEKLKKKSALLAEDEGVSERDKAQTI 754
>gi|225561788|gb|EEH10068.1| AdoMet-dependent rRNA methyltransferase spb1 [Ajellomyces
capsulatus G186AR]
Length = 779
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 153/279 (54%), Gaps = 53/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LK+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 42 DITTDKCRATIRQHLKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 101
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP +D KF
Sbjct: 102 GTFVTKVFRSKDYNPLLWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIDQKFL 161
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PVS+FI P
Sbjct: 162 DPKHVFAELQDPTPNHEAKVFNPEKKKR----KRDGYEEGNYTQFKEIPVSEFINTADPI 217
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F + + DL A
Sbjct: 218 SIL--------GEYNKLSF-------------EQSIGGDLALA----------------- 239
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
++ + P TT EIQ CC+D++VLG+K+ RNLL+W
Sbjct: 240 ------TLARLPETTKEIQLCCEDLKVLGKKEFRNLLRW 272
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A+ V R+K IN RPI+KV+EAK RKK + A+R++K++KK L E +S+ +KA+
Sbjct: 655 AAAVAAIREKMRAINARPIKKVLEAKGRKKFKAAQRLEKLRKKSALLAEDEAMSEKDKAQ 714
Query: 537 NI 538
I
Sbjct: 715 TI 716
>gi|240275390|gb|EER38904.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
capsulatus H143]
Length = 779
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 155/279 (55%), Gaps = 53/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LK+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 42 DITTDKCRATIRQHLKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 101
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP +D KF
Sbjct: 102 GTFVTKVFRSKDYNPLLWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIDQKFL 161
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PVS+FI P
Sbjct: 162 DPKHVFAELQDPTPNHEAKVFNPEKKKR----KRDGYEEGNYTQFKEIPVSEFINTADPI 217
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ + GG + +A
Sbjct: 218 SIL--------GEYNKLSFE---------------------QSIGGDLALA--------- 239
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
++ + P TT EIQ CC+D++VLG+K+ RNLL+W
Sbjct: 240 ------TLARLPETTKEIQLCCEDLKVLGKKEFRNLLRW 272
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV+EAK RKK + A+R++K++KK L E +S+ +KA+ I
Sbjct: 662 REKMRAINARPIKKVLEAKGRKKFKAAQRLEKLRKKSALLAEDEAMSEKDKAQTI 716
>gi|325091232|gb|EGC44542.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
capsulatus H88]
Length = 779
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 155/279 (55%), Gaps = 53/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LK+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 42 DITTDKCRATIRQHLKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 101
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP +D KF
Sbjct: 102 GTFVTKVFRSKDYNPLLWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIDQKFL 161
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PVS+FI P
Sbjct: 162 DPKHVFAELQDPTPNHEAKVFNPEKKKR----KRDGYEEGNYTQFKEIPVSEFINTADPI 217
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F+ + GG + +A
Sbjct: 218 SIL--------GEYNKLSFE---------------------QSIGGDLALA--------- 239
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
++ + P TT EIQ CC+D++VLG+K+ RNLL+W
Sbjct: 240 ------TLARLPETTKEIQLCCEDLKVLGKKEFRNLLRW 272
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV+EAK RKK + A+R++K++KK L E +S+ +KA+ I
Sbjct: 662 REKMRAINARPIKKVLEAKGRKKFKAAQRLEKLRKKSALLAEDEAMSEKDKAQTI 716
>gi|320037455|gb|EFW19392.1| rRNA methyltransferase Spb1 [Coccidioides posadasii str. Silveira]
Length = 712
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 210/413 (50%), Gaps = 73/413 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDAFSQAELALQSLKLATEFLVAG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRMDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPRHVFAELQDPTPNNEAKVFNPEKKKR----KREGYEEGDYTQHKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + + ++ +P G + +A
Sbjct: 268 AIL-------------GTYNTLSFHQ----------------SPSGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT EI+ CC+D++VLG+K+ R LL+W + ++ K+ K+ E
Sbjct: 290 ------TLERLPETTDEIRNCCEDLKVLGKKEFRTLLRWRLKVREQFGLAVKKGAKKAEE 343
Query: 298 GE--------EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ 349
E +EE +++EM ++ E K E RRE +RK+K++ + + +
Sbjct: 344 SEEVAEIEPMDEELAIQEEMQRLQEH------ESSRKKKERRRENERKQKEIVRLQMHMI 397
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK-PEVFADSDEE 401
++ M G +G + MF + I IT+ K +V ++ DEE
Sbjct: 398 TPTDIGMEQSGPMG-----EGAMFSIKPITREGATRNITSGKMVDVQSEEDEE 445
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPTESLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTDKC--RATIRQHLKTWKADTVLHD 117
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK RKK ++A+R++K+KKK L E VS+ +KA+ I
Sbjct: 596 REKMRAINARPIKKVREAKGRKKFKEAQRLEKLKKKSALLAEDEGVSERDKAQTI 650
>gi|85103106|ref|XP_961445.1| AdoMet-dependent rRNA methyltransferase spb1 [Neurospora crassa
OR74A]
gi|73621942|sp|Q9P6V8.2|SPB1_NEUCR RecName: Full=AdoMet-dependent rRNA methyltransferase spb-1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|16415988|emb|CAB88626.2| conserved hypothetical protein [Neurospora crassa]
gi|28922991|gb|EAA32209.1| AdoMet-dependent rRNA methyltransferase spb1 [Neurospora crassa
OR74A]
Length = 831
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 207/401 (51%), Gaps = 55/401 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK DVVLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRATIRSHLKTWKADVVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D K
Sbjct: 152 GTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKLL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F+++ G + +V+K K GY +K + S+FI P +L
Sbjct: 212 DPRSVFEDVAGPAPNNEAKVYNPEVKKRKREGYEEGDYTQFKEISASEFINTVDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
Q N K F Q V L A
Sbjct: 272 ------------------QYN-KLSFEQPKNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI+ CC D++VLGRK+ + LLKW + + K+ +K +E
Sbjct: 291 ---LDKLPETTEEIRLCCADLKVLGRKEFKLLLKWRLKVREIFGFPSKKTQK---AAVDE 344
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E V + MDEE ++ +E++ +K++E + KR++++ ++++ K +M + M D
Sbjct: 345 EVAVVENMDEE----LRIQEELQRIKEKETSKKKRERRRENEKKQKEIVRMQMNMTAPMD 400
Query: 362 LGPTE---NDDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
+G + + MF+L I L+ I K V +++
Sbjct: 401 IGVEQEGPRGEGAMFRLKTIDQNAALNKIAKGKMAVIKETE 441
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QV + M +SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMPTNSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R+ LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRSHLKTWKADVVLHD 117
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAKARKK +QA+R++K+KKK + L +S+ EKA +I
Sbjct: 724 NARPIKKVAEAKARKKFKQAQRLEKLKKKADMLAGDDGMSEKEKAASI 771
>gi|320582207|gb|EFW96425.1| rRNA methyltransferase, putative [Ogataea parapolymorpha DL-1]
Length = 824
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 212/409 (51%), Gaps = 79/409 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ C+ + LKTWK D VLHDG+PNVG+NWV DAY Q LTL AL+LA L G
Sbjct: 94 DITTEDCKSKLRGHLKTWKADTVLHDGAPNVGLNWVQDAYTQSHLTLQALRLAVEHLAAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY +L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKVFRSRDYNNLVWVFRQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPK F+EL +G +N K +V+K K GY L+ + + ++ E +
Sbjct: 214 DPKEVFEEL--PEGPVNNEAKVFNPEVKKRKRDGYDEGDYTLFHPMALLDWVRQEEDVI- 270
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
+G S + F++ + + +++ L++ K
Sbjct: 271 ----NTLG----SVSKFEIDENSDEWKLLRRMK--------------------------- 295
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV------LHDEKTEKEKEEEK 293
TT E ECCKD++VLG+KD R L+KW K L DEK EK+ E E
Sbjct: 296 ----------DTTPEFLECCKDLKVLGKKDFRMLIKWRKHARLVLDLDDEKEEKQIEVE- 344
Query: 294 EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E+ EE+ K +EIEE+K++ R + KR+K++ ++ R + ++M
Sbjct: 345 --------------ELTEEQ----KIDQEIEEMKEKIRLKQKREKRRKNEARQQEIQRMQ 386
Query: 354 LKMLLKGDLG--PTENDDEEMFKLSQIRTTDQLD-LITASKPEVFADSD 399
+ ML +G + E +F L T QL+ L K VF D
Sbjct: 387 MNMLTDMQIGIDAGQIGSESLFNLKLAEKTGQLNELARGKKSMVFTGED 435
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK++Q+N+K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKILQINQKYGHFLEKSKVVIDLCAAPGSWCQVAAQLCPVNSLIVGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E CK +R LK WK VLHD
Sbjct: 83 KPIPNCITFQSDITTEDCKS-------KLRGHLKTWKADTVLHD 119
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
++K ++N RPI+KV+EA RKK R +R++K+KKK + + E S+ +KA+ I+A
Sbjct: 703 KEKMKQLNARPIKKVMEAVGRKKLRAIKRLEKIKKKSDLIAEDDSKSELDKAKEIQA 759
>gi|226294107|gb|EEH49527.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb18]
Length = 776
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/408 (36%), Positives = 202/408 (49%), Gaps = 64/408 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + K+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 42 DITTDKCRATIRQHFKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLAPG 101
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D +F
Sbjct: 102 GTFVTKVFRSKDYNPLLWVFKQLFTSVKATKPPSSRNVSAEIFVVCLGFKAPKHIDPRFL 161
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D K+ F EL E N KKK+ K GY + +K +PVS+FI P
Sbjct: 162 DAKHVFAELQDPTPNYEAKVFNPEKKKR----KRDGYEEGNYIQFKEIPVSEFINTTDPI 217
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ +F + DL A
Sbjct: 218 SIL--------GEYNKLSF-------------EQSTGADLALA----------------- 239
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGG 296
++ + P TT EIQ CC+D++VLG+K+ RNLL+W KV +K K
Sbjct: 240 ------TLKRLPETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGSSKAVE 293
Query: 297 EGEEEEKVVEDE---MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E E DE + E+ + L + KE K E R+E +RK+K++ + + + M+
Sbjct: 294 SEEVAEVEPMDEELALQEDLRHLRE--KETSRKKRERRKENERKQKEIVRMQMHMTTPMD 351
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEE 401
+ G G + +MF L I T + IT+ K DEE
Sbjct: 352 IGTEQSGPFG-----EGQMFSLKPINRTGAVANITSGKMVNVESEDEE 394
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK RKK + A+R++K++KK L E +S+ +KA+ I
Sbjct: 658 REKLRAINARPIKKVQEAKGRKKFKAAKRLEKLRKKSALLAEDEAMSEKDKAQTI 712
>gi|255954021|ref|XP_002567763.1| Pc21g07220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589474|emb|CAP95619.1| Pc21g07220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 838
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 207/396 (52%), Gaps = 60/396 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I +K WK DVVLHDG+PNVG WV DA+ Q L L +L+LA+ L EG
Sbjct: 92 DITTDKCRATIRSHIKHWKADVVLHDGAPNVGSAWVQDAFSQAELVLESLRLATDFLGEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ Y AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFNSVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F EL A A + + +K K GY +K LPV++FI P +L
Sbjct: 212 DPKHVFAELAAPTPNYEAKVFNPEKKKRKREGYEEGDYTQHKELPVTEFINTMDPISIL- 270
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+ K F Q PGG ++ S++ +
Sbjct: 271 ------------GAYN------KLSFQQ----------PPGG-------DLALSTLDRLE 295
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEK---TEKEKEEEKEGGEG 298
+ TT EI+ CC+D++VLG+K+ RNLL+ W++ EK K+K ++ E
Sbjct: 296 E--------TTDEIRTCCEDLKVLGKKEFRNLLR-WRIKCREKFGLVIKKKPTQEGEAEE 346
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E +++E+ +E + ++ + K E R+E ++K+K + +M + M
Sbjct: 347 VAEVAPMDEELQIQEDLIRMREQQTAKGKKERRKENEKKRKDII--------RMQMNMTT 398
Query: 359 KGDLGPTE---NDDEEMFKLSQIRTTDQLDLITASK 391
D+G + ++ F L +I ++ D + ++
Sbjct: 399 PTDIGMEQLGMGGEDSTFTLRRIDRENKRDAVVNAR 434
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+VC+DLCAAPG W QVA + M + S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNQKYGFLEKSRVCIDLCAAPGSWCQVAAEYMPSQSLIIGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ +K WK VLHD
Sbjct: 82 PIPRAITFQSDITTDKC--RATIRSHIKHWKADVVLHD 117
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 454 EFDTDEEDGLGKLLRYWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRM 513
E+ D+E K +R K+ AA R+K IN RPI+KV+EA+ RKK + A+R+
Sbjct: 696 EWFLDDEGKHSKPVRPVTKAAAAA-----IREKLRAINARPIKKVMEAQGRKKYKAAQRL 750
Query: 514 DKMKKKLETLMEAPDVSDAEKARNI 538
+K++KK L E +S+ +KA I
Sbjct: 751 EKLRKKSALLAEDDALSERDKAGAI 775
>gi|425772161|gb|EKV10575.1| AdoMet-dependent rRNA methyltransferase spb1 [Penicillium digitatum
Pd1]
gi|425777448|gb|EKV15622.1| AdoMet-dependent rRNA methyltransferase spb1 [Penicillium digitatum
PHI26]
Length = 815
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 154/275 (56%), Gaps = 45/275 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I +K WK DVVLHDG+PNVG WV DA+ Q L L +L+LA+ L EG
Sbjct: 92 DITTDKCRATIRSHIKHWKADVVLHDGAPNVGAAWVQDAFSQAELVLESLRLATDFLGEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFNSVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ F EL A A + + +K K GY +K LPV++FI P +L
Sbjct: 212 DPKHVFAELTAPTPNYEAKVFNPEKKKRKREGYEEGDYTQHKELPVTEFINSMDPISILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GY K F Q PGG ++ S++ +
Sbjct: 272 -------GY------------NKLSFQQ----------PPGG-------DLALSTLDRLE 295
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ TT EI+ CC+D+++LG+K+ RNLL+W
Sbjct: 296 E--------TTDEIRTCCEDLKILGKKEFRNLLRW 322
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+VC+DLCAAPG W QVA + M A S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNQKYGFLEKSRVCIDLCAAPGSWCQVAAEYMPAQSLIIGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ +K WK VLHD
Sbjct: 82 PIPRAITFQSDITTDKC--RATIRSHIKHWKADVVLHD 117
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 454 EFDTDEEDGLGKLLRYWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRM 513
E+ D+E+ K +R K+ AA R+K IN RPI+KV+EA+ RKK + A+R+
Sbjct: 673 EWFLDDENKHSKPVRPITKAAAAA-----IREKMRAINARPIKKVMEAQGRKKYKAAQRL 727
Query: 514 DKMKKKLETLMEAPDVSDAEKARNI 538
+K++KK L E +S+ +KA I
Sbjct: 728 EKLRKKSALLAEDDALSERDKAGAI 752
>gi|225684454|gb|EEH22738.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb03]
Length = 826
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 197/408 (48%), Gaps = 64/408 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + K+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHFKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLAPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTSVKATKPPSSRNVSAEIFVVCLGFKAPKHIDPRFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D K+ F EL E N KKK+ K GY + +K +PVS+FI P
Sbjct: 212 DAKHVFAELQDPTPNYEAKVFNPEKKKR----KRDGYEEGNYIQFKEIPVSEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L ++ + A L L R
Sbjct: 268 SILGEYNKLSFEQSTGADLALTTLKR---------------------------------- 293
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGG 296
P TT EIQ CC+D++VLG+K+ RNLL+W KV +K K
Sbjct: 294 ----------LPETTKEIQLCCEDLKVLGKKEFRNLLRWRIKVREKFGLAVKKGSSKAVE 343
Query: 297 EGEEEEKVVEDE---MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E E DE + E+ + L + KE K E R+E +RK+K++ + + + M+
Sbjct: 344 SEEVAEVEPMDEELALQEDLRHLHE--KETSRKKRERRKENERKQKEIVRMQMHMTTPMD 401
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEE 401
+ G G + +MF L I T + IT+ K DEE
Sbjct: 402 IGTEQSGPFG-----EGQMFSLKPINRTGAVANITSGKMVNVESEDEE 444
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPSQSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHFKSWKADTVLHD 117
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK RKK + A+R++K++KK L E +S+ +KA+ I
Sbjct: 708 REKLRAINARPIKKVQEAKGRKKFKAAKRLEKLRKKSALLAEDEAMSEKDKAQTI 762
>gi|121713778|ref|XP_001274500.1| rRNA methyltransferase Spb1, putative [Aspergillus clavatus NRRL 1]
gi|119402653|gb|EAW13074.1| rRNA methyltransferase Spb1, putative [Aspergillus clavatus NRRL 1]
Length = 796
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 153/279 (54%), Gaps = 53/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LK WK D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP ++D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY +K +PV++FI P
Sbjct: 212 DPKHVFAELVETSHNNEARVFNPEKKKR----KRDGYEEGDYTQHKEIPVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L ++ + ++ APGG + +A N +
Sbjct: 268 AIL-------------GSYNTLSFDQ----------------APGGDLALATLNRLE--- 295
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
TT EI+ CC+D++VLG+K+ RNLL+W
Sbjct: 296 ------------DTTEEIKTCCQDLKVLGKKEFRNLLRW 322
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPTQSIIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPRVITFQSDITTEKC--RATIRQHLKHWKADTVLHD 117
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV+EAK RKK + A+R++K++KK L + +S+ +K++ I
Sbjct: 687 INARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAI 735
>gi|320593636|gb|EFX06045.1| rRNA methyltransferase [Grosmannia clavigera kw1407]
Length = 858
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 203/394 (51%), Gaps = 57/394 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I + LKTWK D VLHDG+PNVG WV D+++Q L L A+KLA+ L EG
Sbjct: 92 DITTEKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDSFNQAELALQAMKLATDFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ + AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK F EL A+ N K +V+K K GY +K +P S+FI+ P +L
Sbjct: 212 DPKAVFAEL-ADPTPNNEAKVYNPEVKKRKRDGYEEGDYTQFKEMPASEFIQTTDPIAIL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q NR F Q V L A
Sbjct: 271 G------------------QYNR-LSFEQPKNGDVALAA--------------------- 290
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
+ K P TT EI+ C D++VL RK+ + LL+W + + K K +
Sbjct: 291 ----LDKLPETTEEIRLSCADLKVLSRKEFKVLLRWRLRVRELFGFPSK---KTAAKPLS 343
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
EE D MDEE MK +E++ +KD + KR+K+K ++++ K +M + M
Sbjct: 344 EEVTQVDTMDEE----MKIQQELQAMKDRTDSKKKREKRKENEKKQKDIVRMQMNMTAPM 399
Query: 361 DLGPTEND---DEEMFKLSQIRTTDQLDLITASK 391
D+G + D D MF L +++ D L I K
Sbjct: 400 DIGMEQADAMGDGSMFALKKLQEPDALRRIAKGK 433
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A+SII D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMPANSIIVGVDLSPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 SIPKVITFQSDITTEKC-------RATIRQHLKTWKADTVLHD 117
>gi|295670405|ref|XP_002795750.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284835|gb|EEH40401.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 825
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 201/407 (49%), Gaps = 62/407 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + K+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHFKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLTPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFATVKATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D K+ F EL E N KKK+ K GY + +K +PVS+FI P
Sbjct: 212 DAKHVFAELQDPTPNYEAKVFNPEKKKR----KRDGYEEGNYIQFKEIPVSEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q S DL A
Sbjct: 268 SILGEYN-------------------KLSFEQSS--GADLALA----------------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEK---TEKEKEEEKE 294
++ + P TT EI+ CC+D++VLG+K+ RNLL+ W++ EK K+ +
Sbjct: 290 ------TLKRLPETTKEIRLCCEDLKVLGKKEFRNLLR-WRIKVREKFGLAVKKGSSKPV 342
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
E E + + +E+ +E KE K E R+E +RK+K++ + + + M++
Sbjct: 343 ESEEVAEVEPMGEELAIQEDLRHLREKETSRKKRERRKENERKQKEIVRMQMHMTTPMDI 402
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEE 401
G G + +MF L I T + IT+ K DEE
Sbjct: 403 GTEQSGPFG-----EGQMFSLKPINRTGAVANITSGKMVNVESEDEE 444
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPSQSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHFKSWKADTVLHD 117
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK RKK + A+R++K++KK L E +S+ +KA+ I
Sbjct: 708 REKLRAINARPIKKVQEAKGRKKFKAAKRLEKLRKKSALLAEDEAMSEKDKAQTI 762
>gi|302511111|ref|XP_003017507.1| hypothetical protein ARB_04388 [Arthroderma benhamiae CBS 112371]
gi|291181078|gb|EFE36862.1| hypothetical protein ARB_04388 [Arthroderma benhamiae CBS 112371]
Length = 768
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 161/313 (51%), Gaps = 66/313 (21%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 75 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 134
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 135 GTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 194
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 195 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKELPATEFINTTDPI 250
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +PGG + +A
Sbjct: 251 SILGSYN-------------------KLTFTQ----------SPGGDLALA--------- 272
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-------------WKVLHDEK 284
++ + P TT EI+ CC+D++VLG+KD R LL+W + +H+ +
Sbjct: 273 ------TLQRLPETTNEIRMCCEDLKVLGKKDFRQLLRWRIKMDEELALQEDLRRMHERE 326
Query: 285 TEKEKEEEKEGGE 297
T K K E ++ E
Sbjct: 327 TSKNKRERRKENE 339
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGG 223
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAP G
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPVG 57
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 652 REKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 706
>gi|367037159|ref|XP_003648960.1| hypothetical protein THITE_2107005 [Thielavia terrestris NRRL 8126]
gi|346996221|gb|AEO62624.1| hypothetical protein THITE_2107005 [Thielavia terrestris NRRL 8126]
Length = 822
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 208/409 (50%), Gaps = 71/409 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK D VLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRATIRTHLKTWKADCVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D +
Sbjct: 152 GTFVTKVFRSKDYNPLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPRLL 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP+ F++L +D N K QV+K K GY +K + S+FI+ P +
Sbjct: 212 DPRSVFEDL--KDPAPNNEAKVYNPQVKKRKREGYEEGDYTQFKEIAASEFIQTTDPIAI 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNR-KFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L Q NR FE Q V +
Sbjct: 270 LG------------------QYNRLTFEQAQNGDVAL----------------------- 288
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV-----LHDEKTEKE--KE 290
++ + P T EI+ CC D+++LGRK+ + LLKW +V L +KT K E
Sbjct: 289 ----AALDRLPETNDEIRACCADLKILGRKEFKMLLKWRLRVREIFGLPTKKTTKTPIAE 344
Query: 291 EEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E E +EE K+ E+ +EKEL K K E R+E ++K+K++ + + +
Sbjct: 345 EVAEVENMDEELKIQEELQRIKEKELSKK-------KRERRKENEKKRKEIVRMQMNMTA 397
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSD 399
M++ M +G G + MF+L I T+ L I K + +++
Sbjct: 398 PMDIGMEQEGPRG-----EGAMFRLKAIDQTEALRRIAKGKMAMLTEAE 441
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 60/103 (58%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+V +DLCAAPG W QV + M SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSRVVLDLCAAPGSWCQVCAETMPKDSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRTHLKTWKADCVLHD 117
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EA+ARKK +QARR++K+KKK + L +S+ EKA +I
Sbjct: 713 NARPIKKVAEARARKKLKQARRLEKLKKKADLLASDEGMSEKEKATSI 760
>gi|302662114|ref|XP_003022716.1| hypothetical protein TRV_03177 [Trichophyton verrucosum HKI 0517]
gi|291186676|gb|EFE42098.1| hypothetical protein TRV_03177 [Trichophyton verrucosum HKI 0517]
Length = 783
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 149/279 (53%), Gaps = 53/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 64 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 123
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 124 GTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 183
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 184 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKELPATEFINTTDPI 239
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +PGG + +A
Sbjct: 240 SILGSYN-------------------KLTFTQ----------SPGGDLALA--------- 261
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
++ + P TT EI+ CC+D++VLG+KD R LL+W
Sbjct: 262 ------TLQRLPETTNEIRMCCEDLKVLGKKDFRQLLRW 294
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 667 REKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 721
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%), Gaps = 2/31 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLC 218
KGYR+RAAFKLIQLN+K+ FL+ K+ VDL
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLE--KIGVDLS 50
>gi|296809876|ref|XP_002845276.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma otae CBS
113480]
gi|238842664|gb|EEQ32326.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma otae CBS
113480]
Length = 804
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 192/379 (50%), Gaps = 59/379 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLIPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 212 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKELPATEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +PGG + +A
Sbjct: 268 SILGSYN-------------------KLTFAQ----------SPGGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGG 296
++ + P TT E++ CC+D++VLG+KD R LL+W KV +K + E
Sbjct: 290 ------TLQRLPETTNEVRMCCEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGSKNEET 343
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
E E + +++E+ +E +E + K E R+E +RK+K + + + + + M
Sbjct: 344 EEVAEVEPMDEELALQEDLKRMHERETSKNKRERRKENERKRKDIIRLQMNMTTPKEIGM 403
Query: 357 LLKGDLGPTENDDEEMFKL 375
G LG + MF+L
Sbjct: 404 EQAGPLG-----EGAMFRL 417
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPSQSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 AIPKVITFQSDITTDKC--RATIRQHFKTWKADTVLHD 117
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 688 REKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 742
>gi|326472373|gb|EGD96382.1| rRNA methyltransferase [Trichophyton tonsurans CBS 112818]
Length = 812
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 191/387 (49%), Gaps = 74/387 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 152 GSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 212 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKELPATEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +PGG + +A
Sbjct: 268 SILGSYN-------------------KLTFTQ----------SPGGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---------WKVLHDEKTEKE 288
++ + P TT EI+ CC+D++VLG+KD R LL+W V K E+E
Sbjct: 290 ------TLQRLPETTNEIRMCCEDLKVLGKKDFRQLLRWRIKVREKFGLAVKKGPKNEEE 343
Query: 289 KEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKL 348
EE E +EE + ED E+E K K E R+E +RK+K + + + +
Sbjct: 344 TEEVAEVEPMDEELALQEDLRRMHERETSKN-------KRERRKENERKRKDIVRLQMNM 396
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKL 375
+ M G LG + MF+L
Sbjct: 397 TTPKEIGMEQAGPLG-----EGAMFRL 418
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVATECMPSQSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHFKTWKADTVLHD 117
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 696 REKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 750
>gi|406603079|emb|CCH45414.1| hypothetical protein BN7_4996 [Wickerhamomyces ciferrii]
Length = 834
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 209/408 (51%), Gaps = 77/408 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 96 DITTEDCRSRLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLSIG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+++ AP KLD +
Sbjct: 156 GTFVTKIFRSKDYNKLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKNFKAPKKLDPRLL 215
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPK F+EL DG N K +V+K K GY + +K+LP+ +FI+ E P +
Sbjct: 216 DPKEVFEELA--DGPANNEAKVFNPEVKKRKREGYEEGDYLQFKSLPIMEFIKDENPIDI 273
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L S
Sbjct: 274 LGET----------------------------------------------------STFQ 281
Query: 240 FDDES-----VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
DDE V K T+ E+ EC KD++VLG+KD R +L+W K+ K + +K
Sbjct: 282 IDDEDPDWKLVKKLKQTSGELLECFKDLKVLGKKDFRMILRWRKI-----ARKLLDLDK- 335
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
++E VE E E++++ KE+++++ ++ + KR+K+K ++ + K +M +
Sbjct: 336 ----DDEPVTVEVEPLNEDEQI---DKELDQVRSKQITKQKREKRKQNEMKQKEIVRMQM 388
Query: 355 KMLLKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
ML D+G + +F L T QL+ ++ K + D +E
Sbjct: 389 NMLTPKDIGIEAASLGADSLFNLKTAEKTGQLNDLSKGKRRMIFDQNE 436
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL++SKV +DLCAAPG W QVA + +S+I D +
Sbjct: 25 KGYRARSSFKIIQINEKYGHFLERSKVVIDLCAAPGSWCQVASKLCPVNSMIIGVDIVPI 84
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 85 KPMPNCITFQSDITTEDC-------RSRLRGYMKTWKADTVLHD 121
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++N RPI+KV EAK RKK R R++K+KKK + + E D S+ +KA I
Sbjct: 721 QLNARPIKKVAEAKGRKKMRALARLEKLKKKSDIINEDSDKSEKDKAEEI 770
>gi|324504254|gb|ADY41837.1| RRNA methyltransferase 3 [Ascaris suum]
Length = 800
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 239/471 (50%), Gaps = 102/471 (21%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+K R I +EL+TW+ D VLHDG+PNVG+NW++DA+ Q CLTL AL+LA+ +L +
Sbjct: 92 DITTEKARQMIKKELQTWEADCVLHDGAPNVGLNWLHDAFQQNCLTLSALRLATQVLAKN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY SL+ +F++LF++VH KP ASR ESAEIFVVC+ Y+ PAK++ +
Sbjct: 152 GCFVTKVFRSNDYHSLISVFEKLFKKVHVWKPAASRLESAEIFVVCEKYLKPAKVNAELL 211
Query: 123 DPKYAFKELGAE----DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DP+ F E E + +L +++ +K KA GY LYK +P S+FI
Sbjct: 212 DPRKVFSESKNETKPANPQLMLHTRRKEKKVKAEGYEGTELALYKAIPASQFIH------ 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
S+ +DL + ++ I
Sbjct: 266 --------------------------------SRDYLDL--------------LSKTNKI 279
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVL----HDEKTEKEKEEEKE 294
DDE K+P+TT E++ C +D++V G +++R++L W K L +E+ + +KE
Sbjct: 280 VLDDERWEKNPATTEEVRHCIEDVKVCGPRELRHILLWRKKLLRSIEEEEEPGGETLDKE 339
Query: 295 GGEGEE--EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKM 352
E +E + VEDE EL + +EI K E++ LK+KKKK+ KE+ K Q++
Sbjct: 340 QMEVDEPPDPDAVEDE------ELARIDEEIARAKAEDKATLKKKKKKMLKEKAKAQKRK 393
Query: 353 NLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKY 412
LKM+ +GD+ + D +F L + QL +
Sbjct: 394 QLKMVHEGDVQISTEQD--LFSLKSVANAKQLAAV------------------------- 426
Query: 413 NVEKSELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDTDEEDGL 463
++DS PDDS+L E DE + E E D DEE GL
Sbjct: 427 ------MNDSATTDDPPDDSELS-EDEKMDEGEWETIEGAAESDGDEESGL 470
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKLIQLN++FEFLQKS+ +DLCAAPGGW+QVA QNM SS+ D +K
Sbjct: 23 GYRSRAAFKLIQLNKRFEFLQKSRALIDLCAAPGGWLQVAAQNMPVSSVRIGIDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
++ + +Q DI R+ ++ L+ W+ VLHD
Sbjct: 83 INSCITLQ---GDITTEKARQMIKKELQTWEADCVLHD 117
>gi|10954014|gb|AAG25705.1| SPB1-like protein [Kazachstania servazzii]
Length = 842
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 208/413 (50%), Gaps = 74/413 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF +V +TKP +SR SAEIFVVC+ + AP K+D +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFDKVEATKPPSSRNVSAEIFVVCKGFKAPKKMDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPK F+EL DG N K + + K GY N+LY P+ I+ E P +
Sbjct: 214 DPKEVFEEL--PDGPQNMESKIYNPEKKTRKRQGYEEGDNLLYHTTPIMDLIKTEDPITM 271
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L + F +I + +++ ++K K
Sbjct: 272 LGEMNK----------FDIIDDDHEWKVVKKMK--------------------------- 294
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
TT E+ C +D++VLG+KD + +L+W K D G + +
Sbjct: 295 ----------QTTTELLLCIEDLKVLGKKDFKMILRWRKNARD----------LLGLDKD 334
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
EEE++ E +DEEE + KE++ L++++R + KR+K++ ++ + K +M + ML
Sbjct: 335 EEEEITETPLDEEE----QIEKELQGLQEKKRLQTKREKRRKNETKQKEIIRMQMNMLTP 390
Query: 360 GDLG--PTENDDEEMFKLSQIRTTDQLDLITASKP------EVFADSDEEHID 404
DLG + +F L T LD + K E A+ + HID
Sbjct: 391 RDLGIEAASVGQDSLFNLKSAEKTGILDKLAKGKKRMIFTEEELANDVDIHID 443
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV VDLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVVDLCAAPGSWCQVATKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARK+ R R++K+KKK + + D S+ +KA I
Sbjct: 728 LNARPIKKVAEAKARKRMRSVSRLEKIKKKAGLINDDSDKSEKDKAEEI 776
>gi|315044531|ref|XP_003171641.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma gypseum
CBS 118893]
gi|311343984|gb|EFR03187.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma gypseum
CBS 118893]
Length = 812
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 196/384 (51%), Gaps = 68/384 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 212 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKELPATEFINTIDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L K F Q +PGG + +A
Sbjct: 268 SILGSYN-------------------KLTFTQ----------SPGGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
++ + P TT E++ CC+D++VLG+KD R LL+W + EK K+G
Sbjct: 290 ------TLQRLPETTDEVRMCCEDLKVLGKKDFRQLLRWRIKVR----EKFGLAVKKGPR 339
Query: 298 GEEEEKVVEDE--MDEE--EKELMKATKEIEELKD--EERRELKRKKKKVSKERTKLQEK 351
+EE + V + MDEE +E +K E E K+ E R+E +RK+K + + + +
Sbjct: 340 NDEETEEVAEVEPMDEELALQEDLKRMHERESSKNKRERRKENERKRKDIVRLQMNMTTP 399
Query: 352 MNLKMLLKGDLGPTENDDEEMFKL 375
+ M G LG + MFKL
Sbjct: 400 KEIGMEQAGPLG-----EGAMFKL 418
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPSQSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 AIPKVITFQSDITTDKC--RATIRQHFKTWKADTVLHD 117
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 702 INARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 750
>gi|363747754|ref|XP_003644095.1| hypothetical protein Ecym_1019 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887727|gb|AET37278.1| hypothetical protein Ecym_1019 [Eremothecium cymbalariae
DBVPG#7215]
Length = 750
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 211/416 (50%), Gaps = 77/416 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG++WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLSWVQDAFTQSHLTLQALKLAVENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKVFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K GY + +LY P+ F++ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMQAKVYNPEKKVRKRD--GYKENDYLLYHEAPIMDFVKVEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L +LNR +D ++ KQ
Sbjct: 270 QMLG------------------ELNR---------FTIDKEDNEWKILKTLKQ------- 295
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E + C +D++VLGRKD + LL+W K E G +
Sbjct: 296 -------------TTTEFKACIEDLKVLGRKDFKMLLRWRKAAR----------ELLGLD 332
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EEE VE EE+++ KE+++++D++R KR+K+K ++ + K +M ++M
Sbjct: 333 KEEENPEVETVPLTEEEQI---EKELQDMQDKQRLMKKREKRKQNEMKQKEITRMQMQMQ 389
Query: 358 LKGDLGPTEND--DEEMFKLSQIRTTDQLDLITASKP------EVFADSDEEHIDI 405
D+G + E +F L Q T LD + K E A+ ++ ID+
Sbjct: 390 TPTDIGIEAANLGRESLFNLKQAEKTGILDKLAKGKKRMVFTREELAEDNDIQIDV 445
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 23 KGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAANLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + + Q E C R +R +K WK VLHD
Sbjct: 83 KPMTNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKL 520
+N RPI+KV EAKARKK R R++++K+KL
Sbjct: 719 LNARPIKKVAEAKARKKMRALARLERLKRKL 749
>gi|367024317|ref|XP_003661443.1| hypothetical protein MYCTH_2300833 [Myceliophthora thermophila ATCC
42464]
gi|347008711|gb|AEO56198.1| hypothetical protein MYCTH_2300833 [Myceliophthora thermophila ATCC
42464]
Length = 841
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 149/276 (53%), Gaps = 47/276 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK D VLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRATIRTHLKTWKADCVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+ QLF +V +TKP +SR SAEIFVVC+ Y AP ++D +
Sbjct: 152 GTFVTKVFRSKDYNSLLWVLNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPRLL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F++L A+ N K +V+K K GY YK + S+FI+ P +L
Sbjct: 212 DPRSVFEDL-ADPAPNNEAKVYNPEVKKRKREGYEEGDYTQYKEIAASEFIQTTDPLAIL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q NR F Q V L A
Sbjct: 271 G------------------QYNR-LTFEQPKNGDVALAA--------------------- 290
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ K P TT EI+ CC D++VLGRKD + LLKW
Sbjct: 291 ----LDKLPETTQEIRHCCADLKVLGRKDFKLLLKW 322
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 60/103 (58%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QV + M SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVCAETMPKDSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRTHLKTWKADCVLHD 117
>gi|452986947|gb|EME86703.1| hypothetical protein MYCFIDRAFT_77468 [Pseudocercospora fijiensis
CIRAD86]
Length = 846
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 207/407 (50%), Gaps = 62/407 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+DK R I LKTWK D V+HDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITSDKTRAIIRGHLKTWKADCVIHDGAPNVGTAWVQDAFSQNELVLCSLKLATEFLANG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV+KVFRSKD L WIFKQLF +V TKP +SR SAE F VC+ Y AP LD KF
Sbjct: 152 GTFVSKVFRSKDSAKLEWIFKQLFNKVDQTKPPSSRNVSAETFYVCRGYKAPKHLDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP YAF E+ E G+ + K + +K K GY + P S+FI+ + P +L
Sbjct: 212 DPHYAFMEV-KEKGQSDEAKVFNPEKKKRKREGYEEGDWTQFHEAPASEFIQTQDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LNR F Q++ + L A
Sbjct: 271 G------------------SLNR-LHFRQEANGDIALAA--------------------- 290
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---------WKVLHDEKTEKEKEE 291
+ K TT E++E C+D++VLGRK+ + LL+W +K + +EK +
Sbjct: 291 ----LDKLSETTEEVRENCEDLKVLGRKEFKVLLRWRLKARERFGFKQKRTDHKSQEKTQ 346
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
E GE EE VVE MD+E M+ E++ +KD + + +++K++ ++++ K +
Sbjct: 347 EPTEGEAGEEVAVVE-SMDDE----MRYQAELQAMKDAQDKHKRKEKRRENEKKQKDIVR 401
Query: 352 MNLKMLLKGDLGPTENDDEEMFKLSQI-RTTDQLDLITASKPEVFAD 397
M + M D+G + +++F+L + + + IT + + AD
Sbjct: 402 MQMGMTTPSDIGIEAGEHDQVFQLKMVDKNPNTRRQITRGRMQYLAD 448
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+KF FLQ +K +DLCAAPG W+QVA + M S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKFSFLQNAKCLIDLCAAPGSWLQVAAEVMPQKSLILGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ Q + R +R LK WK V+HD
Sbjct: 82 PIPKTITWQGDITSDKT--RAIIRGHLKTWKADCVIHD 117
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 476 AASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKA 535
AA+ + E K +N RPI+KV EAKARK R ARR++K+KKK E L E D S+ +KA
Sbjct: 722 AAAAIKE---KMRALNARPIKKVREAKARKTLRAARRIEKIKKKSEGLAEDGDASERDKA 778
Query: 536 RNI 538
I
Sbjct: 779 NQI 781
>gi|167527299|ref|XP_001747982.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773731|gb|EDQ87369.1| predicted protein [Monosiga brevicollis MX1]
Length = 1021
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 213/392 (54%), Gaps = 64/392 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++CR + +E+K K DVVLHDG+PNVG +W+ DA+ Q L L +LKLA+ L E
Sbjct: 180 DITTERCRQMLRKEMKHLKADVVLHDGAPNVGTSWIQDAFTQASLVLKSLKLATEFLVEK 239
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY +L+W+FKQLF++V +TKP +SR SAEIFVVCQ ++AP ++D K
Sbjct: 240 GTFVTKVFRSRDYHALMWVFKQLFRKVQATKPTSSRNVSAEIFVVCQGFLAPDRIDPKML 299
Query: 123 DPKYAFKELGAEDGK-LNALKKKQVEKSKALGYPSDV-NVLYKNLPVSKFIEHETPTVLL 180
DPKY F+E+ +DG+ L + K K +A GY +V ++ ++ F+
Sbjct: 300 DPKYVFEEI--DDGQTLPDIFKDPKRKPRAEGYDDNVKQSMFTSITAEDFV--------- 348
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
KS +DL A M + I+
Sbjct: 349 -----------------------------KSDNHLDLLA-------------MHNQIVFD 366
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEK-EEEKEGGEGE 299
DD + KHP+TT E++ D++VLG+KD R L+KW + + E K + EG +GE
Sbjct: 367 DDSLIAKHPATTGEVRSLAVDLKVLGKKDFRTLIKWRQQMAMMLEEAAKLQRAAEGADGE 426
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKD-------EERRELKRKKKKVSKERTKLQEKM 352
E EDE E +E ++ +EL+ EE+ +LKRK++ +KE KL+E+M
Sbjct: 427 GSEDEEEDEEGEGSEEDGESADSQDELETALAEAKAEEKAKLKRKRRLKAKEHRKLRERM 486
Query: 353 NLKMLLKGDLGPTENDDEEMFKLSQIRTTDQL 384
L+M D+ N + +F L ++ DQL
Sbjct: 487 ALQMETPMDMAEDTN-ERILFNLKAVKNADQL 517
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 45/50 (90%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G R+R+AFKL+QLNRKF FLQ+SKVC+DLCAAPGGWMQVA QNM SS+I
Sbjct: 111 GLRARSAFKLVQLNRKFNFLQQSKVCIDLCAAPGGWMQVAAQNMPPSSLI 160
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+ +E ++++ EIN RP+R+V+EAKARKK+R R +DK+ K+ E + E +++ EK R I
Sbjct: 892 MADEIKQRQREINARPLRRVLEAKARKKQRVGRALDKLTKQAEAIAENDSLTEREKGRQI 951
Query: 539 R 539
+
Sbjct: 952 Q 952
>gi|156847842|ref|XP_001646804.1| hypothetical protein Kpol_2002p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156117485|gb|EDO18946.1| hypothetical protein Kpol_2002p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 844
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 210/405 (51%), Gaps = 71/405 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF +V +TKP ASR SAEIFVVC+++ AP +LD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFDKVEATKPPASRNVSAEIFVVCKNFKAPKRLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K + GY ++LY P+ +F++ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMESKIYNPEKKVRKRQ--GYEEGDHLLYHETPIMEFVKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + + + +++ ++K K
Sbjct: 270 TMLGEMNK----------FIIDKEDHEWKIIKKLK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + +L+W K E + +K+EEKE
Sbjct: 295 ------------QTTPEFLLCIEDLKVLGKKDFKMILRWRKASR-ELLDLDKDEEKEA-- 339
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+ ++EEE + KE+ ++++++R + KR+K+K ++ + K +M + ML
Sbjct: 340 ------IDVTPLNEEE----QIEKELNDMQEKQRLKQKREKRKKNETKQKEITRMQMNML 389
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
D+G E E +F L T LD + K + DE
Sbjct: 390 TPTDIGIEAAELGRESLFNLKSAEKTGILDKLAKGKKRMIFTEDE 434
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R R++++KKK + + D S+ +KA I
Sbjct: 730 LNARPIKKVAEAKARKKMRAVARLERIKKKAGLINDNSDKSEKDKADEI 778
>gi|189207701|ref|XP_001940184.1| AdoMet-dependent rRNA methyltransferase spb-1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976277|gb|EDU42903.1| AdoMet-dependent rRNA methyltransferase spb-1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 835
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 207/404 (51%), Gaps = 71/404 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LK K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKHLKCDTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP LD +F
Sbjct: 152 GTFVTKIFRSKDYNSLLWVFNQLFAKVEATKPPSSRNVSAEIFVVCRGYKAPKNLDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D + F EL A+ N K K +++K K GY +K PVS FI+ P +L
Sbjct: 212 DARSVFAEL-ADPTPNNEAKVFKPELKKRKREGYEEGDWTQFKEAPVSDFIQTTDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LN K F QK P G + VA
Sbjct: 271 GG------------------LN-KLSFEQK----------PNGDIAVA------------ 289
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHDEKTEKEK-EEEKEGG 296
++ K P TT EI++CC D++VLGR D + LL+W + T+K K E+E +
Sbjct: 290 ---TIDKLPETTKEIRDCCADLKVLGRADFKRLLRWRLRVREIFGFATKKTKVEDEAKAK 346
Query: 297 EGEEEEKVVEDE-MDEEEKELMKATKEIEEL--------KDEERRELKRKKKKVSKERTK 347
E +E E+V E E MDEE M+ +E+E + K + R E +RK+K++++ +
Sbjct: 347 EAKEGEEVAEIESMDEE----MQIQEELERMKEKESKSKKKQRRAENERKQKEITRLQMN 402
Query: 348 LQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
+ L M G D+ MF L + ++ I K
Sbjct: 403 MTTPFELGMEQAG-------GDDSMFALKAVDKAGAINKIAKGK 439
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPAHSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQE--CCKDIRVLGRKDVRNLLKWWKVLHD 282
+ Q R R+ +++ LK VLHD
Sbjct: 82 PIPRCITFQSDITTDKCRATLRQHLKH-LKCDTVLHD 117
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 458 DEEDGLGKLLRYWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMK 517
D+E+ KL R + AAS + E K +N RPI+KV EA+ARKK + A+R++K+K
Sbjct: 697 DDENRHSKLQR--PTTAAAASAIKE---KLRALNARPIKKVREAQARKKFKAAQRLEKLK 751
Query: 518 KKLETLMEAPDVSDAEKARNI 538
KK L + +++ EKA++I
Sbjct: 752 KKSALLADEEGMTEKEKAQSI 772
>gi|66811534|ref|XP_639947.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74854041|sp|Q54NX0.1|RRMJ3_DICDI RecName: Full=rRNA methyltransferase 3 homolog; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|60466892|gb|EAL64936.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 833
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 160/280 (57%), Gaps = 55/280 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT KCR I + LKTWKVDV LHDG+PN+G +WV DAY Q LTL ALKLA+ L
Sbjct: 92 EDITTQKCRTEIKKALKTWKVDVCLHDGAPNMGTSWVQDAYQQAELTLHALKLATEFLTT 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTKVFR DY SL+W+F +LF++V STKP +SR SAEIFVVCQ ++ P ++D K
Sbjct: 152 GGWFVTKVFRGSDYNSLIWVFNKLFKKVESTKPPSSRNASAEIFVVCQGFLNPKRIDPKL 211
Query: 122 FDPKYAFKELGAEDGKLNAL-KKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK+ FKE+ E K++ L +KK+V ++ GY V VLYK +S F+
Sbjct: 212 LDPKFVFKEI-QEVKKVDVLSEKKKVNRA---GYEDGVTVLYKKGFISDFVNSN------ 261
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+H ++ A F FEF + +K+ F
Sbjct: 262 EHLQDL-------ANF------NAFEFDEAAKI--------------------------F 282
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVL 280
+ +H TT EI+E KD++VL + D + ++KW K +
Sbjct: 283 E-----QHELTTPEIKELVKDLKVLNKNDFQKIIKWKKAM 317
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKLIQLN+K+ FL +K C+DLCAAPGGWMQVA + M S+I D ++
Sbjct: 23 QGYRSRAAFKLIQLNKKYNFLGTAKACLDLCAAPGGWMQVASKYMPVQSLIVGVDLVPIR 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHD 282
+ + E + R +++ LK WKV LHD
Sbjct: 83 QVRNCIGLTEDITTQKC--RTEIKKALKTWKVDVCLHD 118
>gi|328876585|gb|EGG24948.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 873
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 151/278 (54%), Gaps = 54/278 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT KCR I + LKTWKVD+ LHDG+PN+G +W+ DA+ Q LTL ALKLA+ L
Sbjct: 92 EDITTAKCRAEIKKALKTWKVDICLHDGAPNMGTSWIQDAFQQAELTLHALKLATEFLTA 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWFVTKVFR DY SL+W+F QLF++V STKPQASR SAEIFVVCQ ++AP KLD K
Sbjct: 152 GGWFVTKVFRGPDYNSLMWVFHQLFKKVDSTKPQASRNASAEIFVVCQGFLAPKKLDPKL 211
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DPK+ FKE + +VE L K + + K I H
Sbjct: 212 LDPKHVFKEA-----------ETKVEARDVL----------KEIKIGKKIRHR------D 244
Query: 182 HATEVGKGYRSRAAFK-LIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+ RS K LI+ N + L K W + +
Sbjct: 245 GYEDDASDLRSIGRVKDLIEANDHLQMLGKY------------WS------------LQW 280
Query: 241 DDESVL--KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
D ES + HP TT EI+EC D++VLG+ D + L+KW
Sbjct: 281 DVESKIYEDHPLTTKEIKECLADLKVLGKTDFKKLIKW 318
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRAAFKLIQLN+K+ FL +K C+DLCAAPGGWMQVA + M A S+I D ++
Sbjct: 23 QGFRSRAAFKLIQLNKKYNFLGSAKACLDLCAAPGGWMQVASKYMPAQSVIVGVDLDPIR 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHD 282
+ +QE + R +++ LK WKV LHD
Sbjct: 83 PIRNCIGLQEDITTAKC--RAEIKKALKTWKVDICLHD 118
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V E +++ IN RPI+KV EAKARKK+ Q +M+K K K ++++ D++ EK R +
Sbjct: 756 MVEEIKREIRLINSRPIKKVAEAKARKKRLQMAKMEKAKDKATSVIDNSDMTGREKTRAL 815
>gi|330916102|ref|XP_003297295.1| hypothetical protein PTT_07642 [Pyrenophora teres f. teres 0-1]
gi|311330112|gb|EFQ94603.1| hypothetical protein PTT_07642 [Pyrenophora teres f. teres 0-1]
Length = 835
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 208/404 (51%), Gaps = 71/404 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LK K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKHLKCDTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLAEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP LD +F
Sbjct: 152 GTFVTKIFRSKDYNSLLWVFNQLFAKVEATKPPSSRNVSAEIFVVCRGYKAPKNLDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D + F EL A+ N K K +++K K GY +K +PVS FI+ P +L
Sbjct: 212 DARSVFAEL-ADPTPNNEAKVFKPELKKRKREGYEEGDWTQFKEVPVSDFIQTTDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LN K F QK P G + VA
Sbjct: 271 GG------------------LN-KLSFEQK----------PNGDIAVA------------ 289
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHDEKTEKEK-EEEKEGG 296
++ K P TT EI++CC D++VLGR D + LL+W + T+K K EEE +
Sbjct: 290 ---TIDKLPETTKEIRDCCADLKVLGRADFKRLLRWRLRVREIFGFATKKTKVEEEAKTK 346
Query: 297 EGEEEEKVVEDE-MDEEEKELMKATKEIEEL--------KDEERRELKRKKKKVSKERTK 347
E +E E+V E E MDEE M+ +E+E + K + R E +RK+K++++ +
Sbjct: 347 EVKEGEEVAEIESMDEE----MQIQEELERMKEKESKSKKKQRRAENERKQKEITRLQMN 402
Query: 348 LQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
+ L M G D+ MF L + ++ I K
Sbjct: 403 MTTPFELGMEQAG-------GDDSMFALKAVDKAGAINKIAKGK 439
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPAHSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQE--CCKDIRVLGRKDVRNLLKWWKVLHD 282
+ Q R R+ +++ LK VLHD
Sbjct: 82 PIPRCITFQSDITTDKCRATLRQHLKH-LKCDTVLHD 117
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 458 DEEDGLGKLLRYWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMK 517
D+E+ KL R + AAS + E K +N RPI+KV EA+ARKK + A+R++K+K
Sbjct: 697 DDENRHSKLQR--PTTAAAASAIKE---KLRALNARPIKKVREAQARKKFKAAQRLEKLK 751
Query: 518 KKLETLMEAPDVSDAEKARNI 538
KK L + +++ EKA++I
Sbjct: 752 KKSALLADEEGMTEKEKAQSI 772
>gi|331226587|ref|XP_003325963.1| hypothetical protein PGTG_07793 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304953|gb|EFP81544.1| hypothetical protein PGTG_07793 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 892
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 205/387 (52%), Gaps = 62/387 (16%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI T CR+ + ELK WK DVVLHDG+PNVG WV DA+ Q L L +LKLA+ +L +
Sbjct: 92 EDIRTQSCRMWLRSELKDWKADVVLHDGAPNVGTAWVQDAFSQSELVLHSLKLATEMLAQ 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G F+TKVFRSKDY SLL+IF QLF++V +TKP +SR SAEIFVVCQ Y+AP K+D +
Sbjct: 152 NGTFITKVFRSKDYNSLLYIFNQLFKKVEATKPPSSRNVSAEIFVVCQGYLAPKKIDPRL 211
Query: 122 FDPKYAFKELGAEDGKLNALKKK----QVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP + FK++ L KK Q E S + P+ NV
Sbjct: 212 LDPAHVFKDVD--------LTKKPTDDQAEASSSKLTPNAQNVFKPE------------- 250
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA--PGGWMQVAKQNMMAS 235
K R+R + + L KS L A P + VA
Sbjct: 251 ----------KKRRTREGY-----DEGDYTLHKSSTASALINAKDPVSILGVA------- 288
Query: 236 SIIHFD----DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEE 291
+ I FD D+++ K +TT EI+ D++VLG+ D + +LKW + E +
Sbjct: 289 NCIKFDNSQQDQAIYKLKATTAEIKTTLTDLKVLGKGDFKKILKWRTAVR----ELLGID 344
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
K + E V + +DEE ++MK +E+ ++ E+ E KR++++++++RT+ ++
Sbjct: 345 SKPVNQAPSEAPVEVEPLDEE--QIMK--EELARIQTEKALENKRERRRLNEKRTRDVQR 400
Query: 352 MNLKMLLKGDLGPTENDDEEMFKLSQI 378
M L+M D+G EN D E+F L +
Sbjct: 401 MQLQMTTPMDIG-IENTDGEVFGLQNV 426
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN++++FL+ ++ C+DLCAAPGGW+QVA + M A+S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKRYQFLESARCCIDLCAAPGGWLQVAAKWMPANSLILGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V E DIR R +R+ LK WK VLHD
Sbjct: 83 PIPKVVTATE---DIRTQSCRMWLRSELKDWKADVVLHD 118
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R K +N RPI+K+ EAK RKK R RR++K + K T+ E D+++ EK+ I
Sbjct: 771 RDKMRALNARPIKKIAEAKGRKKLRTLRRLEKAQSKANTVNETNDLTEKEKSLEI 825
>gi|156058214|ref|XP_001595030.1| hypothetical protein SS1G_03118 [Sclerotinia sclerotiorum 1980]
gi|154700906|gb|EDO00645.1| hypothetical protein SS1G_03118 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 347
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 151/275 (54%), Gaps = 45/275 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I K+WK D VLHDG+PNVG WV D+++Q L L +LKLA+ L G
Sbjct: 92 DITTEKCRATIRTHFKSWKADTVLHDGAPNVGTAWVQDSFNQAELALQSLKLATEFLAPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVCQ + AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCQGFKAPKHLDPKFV 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP++ F EL A + +++K K GY D +K +P S+FI+ P +L
Sbjct: 212 DPRHVFAELSDPTPNNEAKVFNPEIKKRKRDGYEDDNMTQFKEIPASEFIQTTDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+NR F+Q P G + +A +
Sbjct: 272 ------------------SMNR-LSFVQ----------PPNGDVALAALD---------- 292
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
K P TT EI+ C D+RVLGRK+ RNLLKW
Sbjct: 293 -----KLPETTDEIRNDCADLRVLGRKEFRNLLKW 322
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SS+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMPVSSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ Q DI R +R K WK VLHD
Sbjct: 82 PIPRVITFQS---DITTEKCRATIRTHFKSWKADTVLHD 117
>gi|410078444|ref|XP_003956803.1| hypothetical protein KAFR_0D00220 [Kazachstania africana CBS 2517]
gi|372463388|emb|CCF57668.1| hypothetical protein KAFR_0D00220 [Kazachstania africana CBS 2517]
Length = 841
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/415 (36%), Positives = 210/415 (50%), Gaps = 77/415 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TK+FRSKDY L+W+F+QLF+RV +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFITKIFRSKDYNKLIWVFQQLFERVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K GY N+LY P+ +FI+ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMESKIYNPEKKVRKRG--GYDEGDNLLYHETPIMEFIKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L S F + + + +++ ++K +
Sbjct: 270 TMLG----------SMNKFTMDKDDHEWKIIKKLR------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
T E+ C +D++VLG+KD + LL+W K D +KEEEK
Sbjct: 295 ------------QTNDELLSCVEDLKVLGKKDFKMLLRWRKNARD-LLGLDKEEEK---- 337
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E KV + EEE + KE++ L+D++R KR+K++ ++ + K +M L ML
Sbjct: 338 --PEIKVT--PLTEEE----QIEKELQSLQDKQRSLKKREKRRKNEMKQKEITRMQLNML 389
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQL-DLITASKPEVF-----ADSDEEHID 404
D+G E +F L T L DL K +F A ++ HID
Sbjct: 390 TPTDIGIEAASLGKESLFNLKTAENTGILNDLARGKKRMIFSEEELAKDNDIHID 444
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
>gi|258567254|ref|XP_002584371.1| AdoMet-dependent rRNA methyltransferase spb-1 [Uncinocarpus reesii
1704]
gi|237905817|gb|EEP80218.1| AdoMet-dependent rRNA methyltransferase spb-1 [Uncinocarpus reesii
1704]
Length = 768
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 222/448 (49%), Gaps = 77/448 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LKTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 53 DITTDKCRATIRQHLKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 112
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP +D KF
Sbjct: 113 GSFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKHIDPKFL 172
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D ++ F EL E N KKK+ K GY +K + V++FI P
Sbjct: 173 DSRHVFAELQDPTPNNEAKVFNPEKKKR----KREGYEEGDYTQHKEIAVTEFINTTDPI 228
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G + +F+ Q A ++ +++
Sbjct: 229 AIL--------GTYNTLSFQ----------------------------QSASGDLALATL 252
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
P TT EI++CC+D++VLG+K+ R LL+W + EK K+GG+
Sbjct: 253 ERL--------PETTDEIRKCCEDLKVLGKKEFRTLLRWRLKVR----EKFGLAVKKGGK 300
Query: 298 --GEEEEKVVEDEMDEEEKELMKATKEIEELKD--------EERRELKRKKKKVSKERTK 347
E+EE + MDEE + +E++ L+D E RRE +RK+K++ + +
Sbjct: 301 KTEEQEEVAEIEPMDEE----LAIQEELQRLRDQDTSRKKKERRRENERKQKEIVRLQMH 356
Query: 348 LQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK-PEVFADSDEEHIDIV 406
+ ++ M G LG + MF + I +T+ + V +D DEE
Sbjct: 357 MITPTDIGMEQSGPLG-----EGSMFSIKPIAREGATKKVTSGRMVHVESDDDEESSATG 411
Query: 407 PKKIKYNVEKSELDDSGLYYKNPDDSDL 434
++ ++ E D LY + +D ++
Sbjct: 412 DEESDEEEDRLERDLDALYERYQEDREM 439
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K +N RPI+KV EAK RKK +QA+R++K+KKK L E VS+ +KA++I
Sbjct: 653 REKLRALNARPIKKVREAKGRKKMKQAQRLEKLKKKSALLAEDEGVSERDKAQSI 707
>gi|367002363|ref|XP_003685916.1| hypothetical protein TPHA_0E03930 [Tetrapisispora phaffii CBS 4417]
gi|357524215|emb|CCE63482.1| hypothetical protein TPHA_0E03930 [Tetrapisispora phaffii CBS 4417]
Length = 842
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 204/408 (50%), Gaps = 73/408 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF +V +TKP ASR SAEIFVVC+++ AP KLD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFDKVEATKPPASRNVSAEIFVVCKNFKAPKKLDPRIL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP+ F+EL DG N K K+V K + GY +LY LP+ F+ E P
Sbjct: 214 DPREVFEEL--PDGPANMESKIYNPEKKVRKRQ--GYEEGDYLLYHELPIMDFVNTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
LL + F + + +++ L+K K
Sbjct: 270 TLLGENNK----------FTYDKEDHQWKILKKMK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
T+ E C +D++VLG+KD + +LKW K D G +
Sbjct: 295 ------------QTSTEFLACIEDLKVLGKKDFKMILKWRKAARD----------LLGID 332
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EEE +V + + EEE + KE+ +++ +R L+R+K+K ++ + K +M + ML
Sbjct: 333 KEEEVEVEVNPLTEEE----QIDKELSAMQERQRLNLRREKRKKNESKQKELIRMQMNML 388
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLD-LITASKPEVFADSDEEH 402
D+G E +F L T LD L K VF + + H
Sbjct: 389 TPADIGIEAASIGRESLFNLKSAEKTGILDKLARGKKRMVFTEEELAH 436
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KSMPNVITFQSDITTEDC-------RSKLRGHMKTWKADTVLHD 119
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV+EAKARKK R R++++KKK + + D S+ +KA I
Sbjct: 730 LNARPIKKVLEAKARKKMRSVARLERIKKKAGLINDNTDKSEKDKADEI 778
>gi|171692335|ref|XP_001911092.1| hypothetical protein [Podospora anserina S mat+]
gi|170946116|emb|CAP72917.1| unnamed protein product [Podospora anserina S mat+]
Length = 954
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 209/405 (51%), Gaps = 61/405 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK D VLHDG+PNVG WV D+++Q L L +LKLA+ L EG
Sbjct: 187 DITTEKCRATIRTHLKTWKADCVLHDGAPNVGTAWVQDSFNQAELALHSLKLATEFLIEG 246
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+ KQLF +V +TKP +SR SAEIFVVC Y AP KLD +
Sbjct: 247 GAFVTKVFRSKDYNSLLWVLKQLFTKVEATKPPSSRNVSAEIFVVCLGYKAPKKLDPRLL 306
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F+++ A+ N K +++K K GY YK + S+FI+ P +L
Sbjct: 307 DPRTVFEDV-ADAAPNNEAKVYNPEIKKRKRDGYEEGDYTQYKEIAASEFIQTTDPIAIL 365
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q N F Q + V L A
Sbjct: 366 G------------------QYN-ALTFKQATNGDVALAA--------------------- 385
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGGEGE 299
+ K P TT EI+ CC D++VLGRK+ + LLKW KV E K+ +
Sbjct: 386 ----LDKLPETTEEIRTCCADLKVLGRKEFKLLLKWRLKV-----REIFGFPTKKSAKAS 436
Query: 300 EEEKVVEDE-MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
++V E E MDEE M+ +E++ + D+E+ + KR+++ ++ +TK +M + M
Sbjct: 437 LADEVAEVEPMDEE----MRIQEELQRIADKEKGKKKRERRSANEAKTKEIMRMQMHMTA 492
Query: 359 KGDLGPTE---NDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
D+G + + E+FKL + L I K V ++++
Sbjct: 493 PMDIGMEQEGPRGEGEIFKLKAVDENGALRKIAKGKMVVIKEAEQ 537
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M SII D S +K
Sbjct: 117 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAETMPKDSIIIGVDLSPIK 176
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 177 PIPKVITFQSDITTEKC-------RATIRTHLKTWKADCVLHD 212
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EA+ARKK +QA++++K+KKK + LM +++ EKA +I
Sbjct: 846 NARPIKKVAEARARKKFKQAQKLEKLKKKADMLMGDEGLNEKEKASSI 893
>gi|19114041|ref|NP_593129.1| rRNA methyltransferase Spb1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|9910811|sp|O42832.2|SPB1_SCHPO RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|4106665|emb|CAA22605.1| rRNA methyltransferase Spb1 (predicted) [Schizosaccharomyces pombe]
Length = 802
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 192/367 (52%), Gaps = 63/367 (17%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDIT+DKCR + LKTWK DVVLHDG+PNVG W+ DAY Q L L ++KLA L
Sbjct: 91 VEDITSDKCRSQLRGYLKTWKADVVLHDGAPNVGSAWLQDAYGQAQLVLMSMKLACEFLV 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GG FVTKVFRS+DY +LLW+FKQLF +V +TKP +SR SAEIFVVC+ Y AP KLD +
Sbjct: 151 AGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIFVVCRGYKAPKKLDPR 210
Query: 121 FFDPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
F DP+ F+E+ ++A + + K GY D L+K + S+F+ P +
Sbjct: 211 FTDPRTVFEEVQEPVTNVDAKVFHPEKRKRSREGYADDDYTLHKTVLASEFVTANDPIQI 270
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L + E+ +
Sbjct: 271 LGTSAEI--------------------------------------------------VFP 280
Query: 240 FDDESVLKHPSTTVEIQE---CCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG 296
DDE + + V +E CC D++VLG+K+ R++L+W + DE +K E
Sbjct: 281 KDDEECQRLYNLDVTTEEILLCCSDLQVLGKKEFRDILRWRLKIRDEMGIGKKVE----- 335
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+E++ VV E E E + +E+++L + ER +LKR+++K ++ + + +M + M
Sbjct: 336 --DEQKTVV--EEIPEMDEEERLDQELQDLSEAERVKLKRERRKANQRKQREIVRMQMGM 391
Query: 357 LLKGDLG 363
L D+G
Sbjct: 392 LAPMDIG 398
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL+K+KV +DLCAAPGGW+QVA + S+I D + +K
Sbjct: 23 QGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASKTCKPGSLIVGVDLAPIK 82
Query: 248 H-PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P+ +++ D R +R LK WK VLHD
Sbjct: 83 PIPNCHTFVEDITSD---KCRSQLRGYLKTWKADVVLHD 118
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K +N RPI+KV+EA+ RKK R +R+ ++ KK E + E+ D++++EKA+ I
Sbjct: 686 REKMKALNARPIKKVLEAQGRKKMRTIKRLQRVAKKAEGISESGDMTESEKAKEI 740
>gi|366991182|ref|XP_003675357.1| hypothetical protein NCAS_0B09030 [Naumovozyma castellii CBS 4309]
gi|342301221|emb|CCC68987.1| hypothetical protein NCAS_0B09030 [Naumovozyma castellii CBS 4309]
Length = 839
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 210/415 (50%), Gaps = 78/415 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA+ L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAAENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP +LD +
Sbjct: 154 GTFVTKVFRSKDYNKLIWVFQQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K + GY N+LY + +F++ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMESKIYNPEKKVRKRQ--GYEEGDNLLYHEKDIIEFVKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + + + +++ ++K K
Sbjct: 270 TMLGETNK----------FIIDKEDHEWKIIKKMK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + +L+W K D G +
Sbjct: 295 ------------QTTKEFLLCIEDLKVLGKKDFKMILRWRKAARD----------LLGID 332
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EEE ++ + + EEE + KE+++L++ +R + KR+K+K ++ + K +M + ML
Sbjct: 333 KEEESEIEVNPLTEEE----QIEKELQDLQERKRLDQKREKRKKNEMKQKEITRMQMNML 388
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKP------EVFADSDEEHID 404
D+G E +F L T LD + K E A ++ HID
Sbjct: 389 TPMDIGIEAASLGKESLFNLKTAEKTGILDKLAKGKKRMLFTDEELAKDNDIHID 443
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + + Q E C R +R +K WK VLHD
Sbjct: 83 KPMNNCITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R R++K+KKK + + D S+ +KA I
Sbjct: 723 LNARPIKKVAEAKARKKMRAVARLEKIKKKAGLINDDSDKSEKDKAEEI 771
>gi|340904909|gb|EGS17277.1| hypothetical protein CTHT_0065960 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 834
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 211/407 (51%), Gaps = 56/407 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK DVVLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 93 DITTEKCRATIRSHLKTWKADVVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D +
Sbjct: 153 GTFVTKVFRSKDYNKLLWVCNQLFTKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPRLL 212
Query: 123 DPKYAFKELG--AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F++L A + + +Q +K K GY YK +FI P +L
Sbjct: 213 DPRSIFEDLADPAPNNEARVYNPEQ-KKRKREGYEEGDYTQYKETSAIEFINTTDPIAIL 271
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+ K F Q P G + +A
Sbjct: 272 ANYN-------------------KLSFEQ----------PPNGDVALA------------ 290
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
++ K P TT EI+ CC D++VLG+KD R LLKW + + K+ K+ EE
Sbjct: 291 ---ALEKLPETTKEIRACCDDLKVLGKKDFRLLLKWRLRVREIFGLPSKKTAKQQPLVEE 347
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
E KV + MDEE +K +E+E +K++ER + KR+++K ++ + K +M + M
Sbjct: 348 EAKV--EPMDEE----LKIQEELERIKEKERAKKKRERRKENERKHKEIVRMQMHMTTPM 401
Query: 361 DLGPTE---NDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHID 404
D+G + D F+L +I TD L I K + ++++ D
Sbjct: 402 DIGMEQEGPRGDGAFFRLKEIDQTDALRRIAKGKMAMLTEAEQADRD 448
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+K+KV +DLCAAPG W QV + M S+I D + +K
Sbjct: 23 KGYRARAAFKLIQLNKKYGFLEKAKVVLDLCAAPGSWCQVCAETMPKDSLIIGVDLAPIK 82
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R+ LK WK VLHD
Sbjct: 83 PIPKVITFQSDITTEKC-------RATIRSHLKTWKADVVLHD 118
>gi|212529376|ref|XP_002144845.1| rRNA methyltransferase Spb1, putative [Talaromyces marneffei ATCC
18224]
gi|210074243|gb|EEA28330.1| rRNA methyltransferase Spb1, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 203/404 (50%), Gaps = 77/404 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + +K K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L+EG
Sbjct: 92 DITTDKCRSTLRSHVKHLKADTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLREG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC+ + AP +LD KF
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNVSAEIFVVCRGFKAPKRLDPKFL 211
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP++ F EL E N KKK+ K GY +K + V++FI P
Sbjct: 212 DPRHVFAELSDPTPNNEAKVFNPEKKKR----KREGYEEGDYTQHKEISVTEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G +F+ +P G + +A
Sbjct: 268 AIL--------GTYHTLSFQ---------------------QSPTGDLALA--------- 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG-- 295
++ + TT EI++CC+D+RVLG+K+ RNLLKW + K EK G
Sbjct: 290 ------TLERLEETTDEIRKCCQDLRVLGKKEFRNLLKW----------RLKVREKFGLV 333
Query: 296 -----GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ E EE MDEE + +E++ L+D E + K++++K ++ + K
Sbjct: 334 VKKKKTQEEGEEVAEVAPMDEE----LAIQEELQRLRDNENSQRKKERRKENERKRKDIV 389
Query: 351 KMNLKMLLKGDLGPTE---NDDEEMFKLSQIRTTDQLDLITASK 391
+M + M+ D+G + + MF + + + D I + K
Sbjct: 390 RMQMHMITPTDIGMEQGGIDGANTMFAMKAVNRENAADKIASGK 433
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAGSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQE--CCKDIRVLGRKDVRNLLKWWKVLHD 282
+ Q R R V++ LK VLHD
Sbjct: 82 PIPRVITFQSDITTDKCRSTLRSHVKH-LKADTVLHD 117
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
IN RPI+KV EAKARKK + A+R++K++KK L E VS+ +KA I
Sbjct: 683 INARPIKKVREAKARKKFKVAQRLEKLRKKSALLAEDEGVSERDKAEAI 731
>gi|449664240|ref|XP_002156038.2| PREDICTED: pre-rRNA processing protein FTSJ3-like [Hydra
magnipapillata]
Length = 225
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 124/174 (71%), Gaps = 7/174 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + +ELKTW DVVL+DG+PNVG WV DA+ Q L L ALKLAS LK G
Sbjct: 27 DITTDKCRQLVRKELKTWSADVVLNDGAPNVGAAWVQDAFSQAQLALSALKLASEHLKRG 86
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF+TKVFRSKDYT+LLW+F+QLF++VH+TKPQASR ESAEIFVVCQ Y+ P K+D +F
Sbjct: 87 GWFITKVFRSKDYTALLWVFQQLFKKVHATKPQASRNESAEIFVVCQGYLKPDKMDERFL 146
Query: 123 DPKYAFKELG-----AEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFI 171
DPKY FKE+ + K +L KK + + GYP + L+ + +FI
Sbjct: 147 DPKYVFKEIHPIFRLSTPAKSCSLNKKVTRQRE--GYPENNITLHTTITDKEFI 198
>gi|169614552|ref|XP_001800692.1| hypothetical protein SNOG_10422 [Phaeosphaeria nodorum SN15]
gi|111060696|gb|EAT81816.1| hypothetical protein SNOG_10422 [Phaeosphaeria nodorum SN15]
Length = 836
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 205/405 (50%), Gaps = 72/405 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR + + LK +K D VLHDG+PNVG WV DA+ Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATLRQHLKHFKADTVLHDGAPNVGTAWVQDAFTQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP LD KF
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYKAPKNLDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D + F EL AE N K + +K K GY + +PVS+FI+ P +L
Sbjct: 212 DARSVFAEL-AEPAPNNEAKVFNPEKKKRKRGGYEEGDWTQFHEVPVSEFIQTTDPIAML 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
LN K F Q P G + +A
Sbjct: 271 GS------------------LN-KLSFEQ----------PPNGDVAIA------------ 289
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD------EKTEKEKEEEKE 294
++ K TT E++ CC D++VLGR D + LL+W + D +K E+E E+ K+
Sbjct: 290 ---TIDKLKETTKEVRNCCADLKVLGRADFKRLLRWRLKVRDIFGFSAKKKEEEAEKAKD 346
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEEL--------KDEERRELKRKKKKVSKERT 346
EG+E ++ ++MD+E MK +E+E L K + R E +RK+K++ + +
Sbjct: 347 AEEGDEVAEI--EDMDDE----MKIQEELERLKEKDSKSKKKQRRNENERKQKEIVRMQM 400
Query: 347 KLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
+ + M G G D+ MF L + L I K
Sbjct: 401 NMTTPYEIGMEQAGPQG-----DDAMFALKSVDKAGALSRIAKGK 440
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M A S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPAQSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK +K VLHD
Sbjct: 82 PIPRCITFQSDITTDKC--RATLRQHLKHFKADTVLHD 117
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A+ + ++K +N RPI+KV EA+ARKK + A+R++K+KKK L + +++ EKA+
Sbjct: 714 AAAASAIKEKLRALNARPIKKVREAQARKKFKAAQRLEKLKKKSALLADEEGMTEKEKAQ 773
Query: 537 NI 538
+I
Sbjct: 774 SI 775
>gi|302309076|ref|NP_986282.2| AFR734Cp [Ashbya gossypii ATCC 10895]
gi|442570039|sp|Q751U1.2|SPB1_ASHGO RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|299790933|gb|AAS54106.2| AFR734Cp [Ashbya gossypii ATCC 10895]
gi|374109516|gb|AEY98422.1| FAFR734Cp [Ashbya gossypii FDAG1]
Length = 830
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 205/403 (50%), Gaps = 67/403 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+NWV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLNWVQDAFTQSHLTLQALKLAVENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSKDYNKLMWVFQQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPK F+EL DG N K + + K GY +LY +P+ F++ E P +
Sbjct: 214 DPKEVFEEL--PDGPQNMQAKVYNPEKKTRKRDGYEEGDYLLYHTVPIMDFVKVEDPIQM 271
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L + F L + + +++ ++K K
Sbjct: 272 LGTTNK----------FTLDKDDHEWKIVKKLK--------------------------- 294
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
TT E + C +D++VLG+KD + LL+W K E G + +
Sbjct: 295 ----------QTTPEFKACIEDLKVLGKKDFKMLLRWRKAAR----------ELLGLDKD 334
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
EE+ +E EE+++ KE++E++ ++ + KR+K+K ++ + K +M ++M+
Sbjct: 335 EEQPEIETVPLTEEEQI---EKELQEMQQKQNLKKKREKRKQNEIKQKEITRMQMQMITP 391
Query: 360 GDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
DLG + +F L T LD + K + DE
Sbjct: 392 TDLGIEAASIGRDSLFNLKTAEKTGILDDLARGKKRMVFTRDE 434
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASNLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ + Q E C R +R +K WK VLHD
Sbjct: 83 QPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R R++K+KKK + + D S+ +KA I
Sbjct: 715 LNARPIKKVAEAKARKKMRALNRLEKLKKKAGLINDDSDKSEKDKAEEI 763
>gi|146416169|ref|XP_001484054.1| hypothetical protein PGUG_03435 [Meyerozyma guilliermondii ATCC
6260]
Length = 819
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 207/405 (51%), Gaps = 69/405 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTLG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V + + GY +LY LP+ FI+ E P
Sbjct: 214 DPKEVFEELA--DGPQNNEAKIYNPEKKVRRRQ--GYEEGDYLLYHELPILDFIKDEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
L ++ + +K+++
Sbjct: 270 NTLATLNKLTMPDKDNHEWKIVK------------------------------------- 292
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
K S T E+ EC D++VLG+K+ +++LK+ K + EE K E
Sbjct: 293 ---------KLKSYTPELVECFTDLKVLGKKEFKHILKFRKQARELLGLDVPEETKPEIE 343
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EE + ED+ K KE++ + +++R++ KR KK ++ + K ++M + ML
Sbjct: 344 VEE---LTEDQ---------KIDKELQAMTEKQRQKAKRIKKNANELKQKEIQRMQMNML 391
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
++G + E +F LS T +LD + K ++ ++E
Sbjct: 392 TDMNVGIDAAKIGSESLFNLSTAEKTGELDKLAKGKRQMIFSNEE 436
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASNLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNCITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
>gi|190347121|gb|EDK39337.2| hypothetical protein PGUG_03435 [Meyerozyma guilliermondii ATCC
6260]
Length = 819
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 207/405 (51%), Gaps = 69/405 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTLG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V + + GY +LY LP+ FI+ E P
Sbjct: 214 DPKEVFEELA--DGPQNNEAKIYNPEKKVRRRQ--GYEEGDYLLYHELPILDFIKDEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
L ++ + +K+++
Sbjct: 270 NTLATLNKLTMPDKDNHEWKIVK------------------------------------- 292
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
K S T E+ EC D++VLG+K+ +++LK+ K + EE K E
Sbjct: 293 ---------KLKSYTPELVECFTDLKVLGKKEFKHILKFRKQARELLGLDVPEETKPEIE 343
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EE + ED+ K KE++ + +++R++ KR KK ++ + K ++M + ML
Sbjct: 344 VEE---LTEDQ---------KIDKELQAMTEKQRQKAKRIKKNANELKQKEIQRMQMNML 391
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
++G + E +F LS T +LD + K ++ ++E
Sbjct: 392 TDMNVGIDAAKIGSESLFNLSTAEKTGELDKLAKGKRQMIFSNEE 436
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASNLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNCITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
>gi|116206520|ref|XP_001229069.1| hypothetical protein CHGG_02553 [Chaetomium globosum CBS 148.51]
gi|88183150|gb|EAQ90618.1| hypothetical protein CHGG_02553 [Chaetomium globosum CBS 148.51]
Length = 754
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 149/276 (53%), Gaps = 47/276 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK D VLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRATIRTHLKTWKADCVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLIEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+ QLF +VH+TKP +SR SAEIFVVC + AP ++D +
Sbjct: 152 GTFVTKVFRSKDYNSLLWVLNQLFTKVHATKPPSSRNVSAEIFVVCLGFKAPKRIDPRLL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F++L A+ N K +V+K K GY YK + S+FI+ P +L
Sbjct: 212 DPRSVFEDL-ADPAPNNEAKVYNPEVKKRKREGYEEGDYTQYKEIAASEFIQTIDPIAIL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
Q NR F Q V L A
Sbjct: 271 G------------------QYNR-LTFEQPKNGDVALAA--------------------- 290
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ K P TT EI+ CC D++VLGRK+ + LLKW
Sbjct: 291 ----LDKLPETTEEIRLCCADLKVLGRKEFKLLLKW 322
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QV + M SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVCAETMPKDSIIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ Q DI R +R LK WK VLHD
Sbjct: 82 PIPKVITFQS---DITTEKCRATIRTHLKTWKADCVLHD 117
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EA+ARKK +QA++++K+KKK + L +S+ EKA +I
Sbjct: 647 NARPIKKVAEARARKKFKQAQKLEKLKKKADLLAGDEGMSEKEKASSI 694
>gi|388581260|gb|EIM21569.1| FtsJ-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 842
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 212/396 (53%), Gaps = 67/396 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+TT C+ IT E+K D+V+HDG+PNVG W+ DA+ Q L L +LK+A+ IL++G
Sbjct: 75 DLTTQHCKQLITNEMKGNLADLVVHDGAPNVGSAWLQDAFAQNELVLASLKIAAEILEKG 134
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +L+W+F QLF+ V +TKP +SR SAE+FVVCQ +IAP KLD +F
Sbjct: 135 GTFVTKVFRSKDYNNLMWVFNQLFRNVSATKPNSSRLVSAELFVVCQDFIAPQKLDPRFL 194
Query: 123 DPKYAFKELGA-----EDGKLNALKKKQV-----EKSKALGYPSDVNVLYKNLPVSKFIE 172
DPKY FK++ A G ++A V ++ K GY YK + +FIE
Sbjct: 195 DPKYVFKDIAALATDTGKGSVHANAHANVFMPEQKRRKREGYEEGNYTQYKEVSAMEFIE 254
Query: 173 HETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
P LL G + FK +
Sbjct: 255 GTDPVTLL--------GTHNAITFKTKE-------------------------------- 274
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEE 292
D+ +LK+ TT +I C+D++VLG+K+ + L+KW ++ +E + ++++
Sbjct: 275 ---------DKKLLKNEDTTKDILANCEDLKVLGKKEFKQLMKWRIIIREEMGLEVRKKD 325
Query: 293 KEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKM 352
K+ E +E + E ++ +E + ++IE +++E+ K+++++ +++RTK ++M
Sbjct: 326 KK--EDIDESNIEELPVNPDE----QIAEDIERIENEDSARAKKERRRKNEKRTKEVQRM 379
Query: 353 NLKMLLKGDLGPTEND--DEEMFKLSQIRTTDQLDL 386
LKM D+G ++ D++++ Q D DL
Sbjct: 380 QLKMGAPIDIGLEQDQHLDDDVYIPDQKSKGDIFDL 415
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRA FKL +LN++F F++KS++ VDL AAPG W+Q +M S+I
Sbjct: 5 RGYRSRAFFKLAELNKRFNFIEKSRIAVDLGAAPGSWLQNLSSSMPHGSLI 55
>gi|118404228|ref|NP_001072428.1| FtsJ homolog 3 [Xenopus (Silurana) tropicalis]
gi|113197746|gb|AAI21673.1| FtsJ homolog 3 [Xenopus (Silurana) tropicalis]
Length = 298
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 129/186 (69%), Gaps = 4/186 (2%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT+ CR + + L+TWK DVVL+DG+PNVG NW +DA+ Q L+L AL+LA L
Sbjct: 91 EDITTEACRQTVRKHLQTWKADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GGWF+TK+FRS DY SLLWI +Q F++V+STKPQASR ESAEIFVVCQ ++AP K+DT+F
Sbjct: 151 GGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQASRSESAEIFVVCQGFLAPDKIDTRF 210
Query: 122 FDPKYAFKELGAEDGKLNALKK-KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
FDPK+AFK++ DG + + + +K KA GY + LY + F+ E P L
Sbjct: 211 FDPKFAFKDV---DGPVQTVSQLLSHKKPKAEGYAATSLSLYHRASLVDFLTVENPVDFL 267
Query: 181 QHATEV 186
+EV
Sbjct: 268 SKTSEV 273
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFKLIQLNRKF+FL K++ VDLCAAPGGW+QVA + M SS+I D +K
Sbjct: 23 GYRSRSAFKLIQLNRKFQFLPKARALVDLCAAPGGWLQVAAKFMPISSLIIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ +QE DI R+ VR L+ WK VL+D
Sbjct: 83 IPKVLTLQE---DITTEACRQTVRKHLQTWKADVVLND 117
>gi|241956944|ref|XP_002421192.1| 2'-O-ribose RNA methyltransferase, putative; AdoMet-dependent rRNA
methyltransferase, putative;
S-adenosyl-L-methionine-dependent methyltransferase,
putative [Candida dubliniensis CD36]
gi|223644535|emb|CAX41353.1| 2'-O-ribose RNA methyltransferase, putative [Candida dubliniensis
CD36]
Length = 830
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 213/413 (51%), Gaps = 67/413 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAE----DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F+ELG E + K+ +K ++ + GY L+ +P+ FI+ + P
Sbjct: 214 DPKEVFEELGNEKQNNEAKIFNPEKFSSQRQRQ-GYEEGDYTLFHTMPIMDFIKEDDPI- 271
Query: 179 LLQHATEVGKGYRSRAAFKL-IQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
++G S F+L + + +++ L K K+C
Sbjct: 272 -----NQLG----SLNKFELPAKDDHEWKILSKLKLC----------------------- 299
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
T E+ EC KD++VLGRK+ + +LK+ K D + +E+ + E
Sbjct: 300 --------------TPELLECIKDLKVLGRKEFKMILKFRKQARDILGIDKDDEDNDKAE 345
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E E E ++D+E ++LM+ K+ + + ELK+K+ ++ +MN+
Sbjct: 346 IEVEPLTEEQKIDQELQDLMERQKQKAKRAKKNANELKQKE--------IVRNQMNMLTD 397
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLD-LITASKPEVFAD-----SDEEHID 404
+ + + + +F L T QLD L K +F D +E HID
Sbjct: 398 MNIGIEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMIFNDEELAKDNEIHID 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK++Q+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIVQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPVNSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNVITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++K+ ++N RPI+KV+EA+ RKK R RR++K+KKK + + E S+ +KA I
Sbjct: 713 KEKQKQLNARPIKKVLEAQGRKKMRALRRLEKIKKKSDLINEDSGKSERDKADEI 767
>gi|344232036|gb|EGV63915.1| hypothetical protein CANTEDRAFT_105149 [Candida tenuis ATCC 10573]
Length = 819
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 214/406 (52%), Gaps = 71/406 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLSNG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY +L+W+F QLF++V +TKP ASR SAEIFVVC+ + +P KLD +
Sbjct: 154 GTFVTKVFRSRDYNNLMWVFSQLFEKVEATKPPASRTVSAEIFVVCKGFKSPKKLDPRLL 213
Query: 123 DPKYAFKELGA----EDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK+ F+EL + + K+ +KK+ ++ GY +LY +P+ +F+++E P
Sbjct: 214 DPKHVFEELPSGPQNNEAKIYNPEKKKRQRQ---GYEEGDYLLYHVMPLLEFVKNEDPIN 270
Query: 179 LLQHATEVGKGYR--SRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
L ++ + FK+++ + F
Sbjct: 271 TLGDLNKLSVPSKEDEETEFKMVKKLKSF------------------------------- 299
Query: 237 IIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG 296
T E+QEC KD++VLG+KD + +LK+ K E +E+E
Sbjct: 300 ---------------TPELQECIKDLKVLGKKDFKLILKFRK----HARELLGLDEEEAE 340
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
E E + ED+ + KE++EL+D+ +++ KR+KK ++ + K ++M + M
Sbjct: 341 SEIEVEPLTEDQ---------RIDKELQELRDKHKQKSKREKKHKNELKQKEIQRMQMNM 391
Query: 357 LLKGDLG--PTENDDEEMFKLSQIRTTDQLD-LITASKPEVFADSD 399
L ++G +D + +F L T +L+ LI K +F ++D
Sbjct: 392 LTDMNIGIEGATSDSQGLFNLRSAEKTGELNKLIQGKKRMIFNEAD 437
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPKVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
>gi|365981183|ref|XP_003667425.1| hypothetical protein NDAI_0A00220 [Naumovozyma dairenensis CBS 421]
gi|343766191|emb|CCD22182.1| hypothetical protein NDAI_0A00220 [Naumovozyma dairenensis CBS 421]
Length = 841
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 209/415 (50%), Gaps = 77/415 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA+ L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAAENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K + GY N+LY + +F++ E P
Sbjct: 214 DPKDVFEEL--PDGPQNMESKIYNPEKKVRKRQ--GYEEGDNLLYHEKDIIEFVKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + + + ++ L+K K
Sbjct: 270 TMLGETNK----------FTINKEDHEWNILRKMK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + +LKW K D G +
Sbjct: 295 ------------QTTKEFLLCIEDLKVLGKKDFKMILKWRKAARD----------LLGID 332
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E E+ +E EE+++ KE+++L+++++ KR+K+K ++ + K +M + ML
Sbjct: 333 KENEKPEIEVTPLTEEEQI---EKELQDLQEKKKLSQKREKRKKNETKQKELVRMQMNML 389
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQL-DLITASKPEVFAD-----SDEEHID 404
D+G E +F L T L +L + +F D DE HID
Sbjct: 390 TPTDIGIEAANLGKESLFNLKTAEKTGILSELAKGKRRMLFTDEELTKDDEIHID 444
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + + Q E C R +R +K WK VLHD
Sbjct: 83 KPMTNCITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARK+ R R++K+KKK + + D S+ +K+ I
Sbjct: 725 LNARPIKKVAEAKARKRMRAVARLEKIKKKAGLINDDNDKSEKDKSEEI 773
>gi|290998754|ref|XP_002681945.1| rRNA (uridine-2'-O-)-methyltransferase [Naegleria gruberi]
gi|284095571|gb|EFC49201.1| rRNA (uridine-2'-O-)-methyltransferase [Naegleria gruberi]
Length = 823
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 207/398 (52%), Gaps = 64/398 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT K + L+ K DVVLHDG+PNVG NW+ DA+ Q L L ALK+A+ LK
Sbjct: 92 DITTKKTMTMVKNVLRGQKCDVVLHDGAPNVGANWLKDAFSQSELCLFALKMATEFLKPE 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFRSKDYTSL+W+ Q F +V +TKP+ASR SAEIFVVC Y AP ++D K F
Sbjct: 152 GLFITKVFRSKDYTSLMWVLNQFFTKVEATKPKASRDASAEIFVVCFGYKAPKEIDPKLF 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D F+++ ++ KL K +Q +K GY + +LYK +++F+E + P
Sbjct: 212 DASLVFEDVESQKKKLRLSFKDLAQQQKKPNREGYEEGMTLLYKKRSIAEFVESDQPIKF 271
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L E+ EF + S++
Sbjct: 272 LVDYNEL-------------------EFDEASQI-------------------------- 286
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
L HP TT +I E C+D+RVLG+ D R LLKW K + D K E + + +++ E +
Sbjct: 287 -----YLNHPLTTKDIIEACEDLRVLGKPDFRMLLKWRKNMKDYKDELDADNDEDIIEQD 341
Query: 300 EEEKVVE-----DEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
EE++V+E +E+ M + EEL D E +ELK K+ K+ K++ K +
Sbjct: 342 EEDEVMEPIHEDNELSTGISNEMDIPSDEEEL-DGELKELKNKQTKIEKKKEKKVREKQK 400
Query: 355 KMLLKGDLGPTEN-----DDEEMFKLSQIRTTDQLDLI 387
K+ +K + E+ DD +F+++ I + D LD +
Sbjct: 401 KLAIKAAVERQEDMLDTIDDGSLFRMNDISSKDMLDAV 438
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K++FL ++V +DLCAAPGGW+QVAK+ M +S + D +K
Sbjct: 22 QGYRSRAAFKLVQLNKKYDFLGTARVMLDLCAAPGGWLQVAKKFMPVNSTLVGVDLCPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
IQ + + V+N+L+ K VLHD
Sbjct: 82 AIPHVTTIQGDITTKKTMTM--VKNVLRGQKCDVVLHD 117
>gi|401840074|gb|EJT42995.1| SPB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 840
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 209/403 (51%), Gaps = 71/403 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP +LD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG+ N K K+V K + GY N+LY + F++ E P
Sbjct: 214 DPKEVFEEL--PDGQQNMESKIYNPEKKVRKRQ--GYEEGDNLLYHETSILDFVKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G +++ F + + + +++ L+K K
Sbjct: 270 TML--------GEKNK--FTIDKDDHEWKILEKLK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + +L+W KV D + K+ G+
Sbjct: 295 ------------QTTEEFHSCIEDLKVLGKKDFKMILRWRKVARDILGTEVKD-----GD 337
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E E V E ++ EK+L + L++++R +KR++++ ++ + K ++M + M+
Sbjct: 338 STEIEIVPLTEEEQIEKDL-------QGLQEKQRLNIKRERRRKNEMKQKELQRMQMNMI 390
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQL-DLITASKPEVFAD 397
D+G E +F L T L DL + +F D
Sbjct: 391 TPTDIGIEAASLGKESLFNLKTAEKTGILNDLAKGRRRMIFTD 433
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPINSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARK+ R R++K+KKK + + D ++ +KA I
Sbjct: 727 MNARPIKKVAEAKARKRMRAVTRLEKIKKKAGLINDDSDKTEKDKAEEI 775
>gi|46126149|ref|XP_387628.1| hypothetical protein FG07452.1 [Gibberella zeae PH-1]
Length = 839
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 222/460 (48%), Gaps = 84/460 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++ CR + R L + K V+HDG+PNVG W DA+ Q L L +LKLA+ +K
Sbjct: 92 DITSEDCRATLKRLLLSHKACTVIHDGAPNVGTAWTQDAFDQNALVLQSLKLATEFMKPD 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+FKQLF +V +TKP +SR S+EIFVVC+ Y AP K+D +F
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFKQLFNKVEATKPSSSRNVSSEIFVVCRGYKAPKKMDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP Y F EL A + +V+K K GY + + +K +P S+FI+ P +L
Sbjct: 212 DPTYVFAELAGPTPNNEAKVYNPEVKKRKRDGYDEENFLQFKEMPASEFIQTTDPIAVLG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q V L A
Sbjct: 272 SYN-------------------KLSFQQPRNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGGEGEE 300
+ K P TT EI+ C D+RVLGRKD + LLKW KV E +K E
Sbjct: 291 ---LDKLPETTEEIRNSCSDLRVLGRKDFKLLLKWRLKVREIFGFETKKALNTA----ET 343
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
EE + MDEE +K +E+E++KD+E + +R+K++ ++ + + +M L M
Sbjct: 344 EEVAEVESMDEE----LKIQQELEDMKDKENSKRRREKRRENERKQREIVRMQLNMTAPM 399
Query: 361 DLGPTEN---DDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVEKS 417
D+G E + MF L ++ TD + + K V + + ++ +D S
Sbjct: 400 DIGMEEAGPIGEGAMFSLKKVDKTDAMRRLNRGKMIVPSQAPQKQLD------------S 447
Query: 418 ELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDT 457
L SG ++DE+D E+ +E E D+
Sbjct: 448 GLGSSG---------------ETDDESDPEEDRLERELDS 472
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+V +DLCAAPG W+QVA + M S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSRVLIDLCAAPGSWLQVAAEVMPQGSLIVGCDLSPIK 81
>gi|336274703|ref|XP_003352105.1| hypothetical protein SMAC_02540 [Sordaria macrospora k-hell]
gi|380092184|emb|CCC09960.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 833
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 204/393 (51%), Gaps = 55/393 (13%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR I LKTWK DVVLHDG+PNVG WV D+Y+Q L L +LKLA+ L EG
Sbjct: 92 DITTEKCRATIRTHLKTWKADVVLHDGAPNVGTAWVQDSYNQAELALHSLKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+ QLF +V +TKP +SR SAEIFVVC+ + AP ++D K
Sbjct: 152 GTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPPSSRNVSAEIFVVCRGFKAPKRIDPKLL 211
Query: 123 DPKYAFKEL-GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP+ F+++ G + +++K K GY + +K + S+FI P +L
Sbjct: 212 DPRSVFEDVAGPAPNNEAKVYNPEIKKRKREGYEEGEYIQFKEISASEFINTVDPIAILG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
Q N K F Q V L A
Sbjct: 272 ------------------QYN-KLSFEQPKNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEE 301
+ K P TT EI+ CC D++VLGRK+ + LLKW + + K+ +K +E
Sbjct: 291 ---LDKLPETTEEIRLCCADLKVLGRKEFKLLLKWRLKVREIFGFPTKKSQK---AAVDE 344
Query: 302 EKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGD 361
E V + MDEE ++ +E++ +K++E + KR++++ ++++ K +M + M D
Sbjct: 345 EVAVVENMDEE----LRIQEELQRIKEKESSKKKRERRRENEKKQKEIVRMQMNMTAPMD 400
Query: 362 LGPTE---NDDEEMFKLSQIRTTDQLDLITASK 391
+G + + MF+L I L+ I K
Sbjct: 401 IGMEQEGPRGEGAMFRLKAIDANAALNKIAKGK 433
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QV + M +SII D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMPTNSIIIGVDLAPIK 81
Query: 248 HPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q E C R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTEKC-------RATIRTHLKTWKADVVLHD 117
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
N RPI+KV EAKARKK +QA+R++K+KKK + L+ +S+ EKA +I
Sbjct: 725 NARPIKKVAEAKARKKFKQAQRLEKLKKKADMLVGDDGLSEKEKASSI 772
>gi|452845233|gb|EME47166.1| hypothetical protein DOTSEDRAFT_69207 [Dothistroma septosporum
NZE10]
Length = 844
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 205/388 (52%), Gaps = 62/388 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I LKTWK D V+HDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 92 DITTDKCRATIRGHLKTWKADCVIHDGAPNVGTAWVQDAFSQNDLVLSSLKLATEFLAPN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKD + L WIFKQLF +V TKP +SR SAE F VC+ Y AP LD KF
Sbjct: 152 GNFVTKVFRSKDSSKLEWIFKQLFSKVEQTKPPSSRNVSAETFYVCRGYKAPKHLDPKFL 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP YAF E A +GK N + + +K K GY +K P +FI+ + P +
Sbjct: 212 DPAYAFME--AAEGKANMEARVFNPEKKKRKREGYEEGDWTQFKECPAYEFIQTQDPIDM 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L + NR F F +++ ++ A
Sbjct: 270 LG------------------RYNR-FHF--ETEAGDEIAQA------------------- 289
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD--------EKTEKEKEE 291
++ K P TT E+++ C+D++VLGRK+ + LL+W D E T K+ E
Sbjct: 290 ----ALAKLPDTTEEVRQNCEDLKVLGRKEFKVLLRWRLKARDVFGLRQKKEGTHKKAEA 345
Query: 292 EKEGGEGE-EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
+ E EGE EE + + MD+E ++ +E++ L++++ +E +++++K ++ + K
Sbjct: 346 KAEPAEGEVGEEVAMVESMDDE----LRYAEEVQALQEQQNKEKRKERRKENERKQKDIV 401
Query: 351 KMNLKMLLKGDLGPTENDDEEMFKLSQI 378
+M + M ++G +++ +F+L +
Sbjct: 402 RMQMGMTTPSEIGIEAGENDPVFRLKDV 429
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FLQ +K +DLCAAPG W+QVA + M S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYSFLQNAKCLIDLCAAPGSWLQVAAETMPQKSLIVGVDLTPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ Q + R +R LK WK V+HD
Sbjct: 82 PIPKTITFQGDITTDKC--RATIRGHLKTWKADCVIHD 117
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 473 SYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDA 532
S AA+ + E K +N RPI+KV EAKARK R ARR++K+KKK E L E D+ +
Sbjct: 719 SKEAAAAIKE---KLRALNARPIKKVREAKARKTMRTARRLEKLKKKSEGLAEDGDMGER 775
Query: 533 EKARNIR 539
EKA I+
Sbjct: 776 EKAGAIQ 782
>gi|326430676|gb|EGD76246.1| FtsJ cell division protein [Salpingoeca sp. ATCC 50818]
Length = 934
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/396 (33%), Positives = 207/396 (52%), Gaps = 64/396 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + + + K DVVLHDG+PNVG +W+ DA+ Q L L +LKLA+ L++G
Sbjct: 94 DITTEHCRAQLRKNMNHRKADVVLHDGAPNVGTSWIQDAFTQAELVLQSLKLATQFLRKG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY LL++F +LF++VH+TKP +SR SAEIFVVCQ Y+AP ++D +
Sbjct: 154 GTFVTKVFRSRDYPKLLYVFGKLFEKVHATKPSSSRNVSAEIFVVCQRYVAPHRIDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK--KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
D + F E+ E + N L++ K+ K K GY YK++ V +FI
Sbjct: 214 DSRTVFSEVEPEKEEPNVLQQKEKKKNKPKPEGYEEGNYTQYKDVNVDEFI--------- 264
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
R+ ++ F F S
Sbjct: 265 ----------RANDFMTMLSTYSAFTFSPNS----------------------------- 285
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD-EKTEKEKEEEKEGGEGE 299
+LK P TT EI+ C+D+++L +KD + L+KW + + + E++ ++GG+G
Sbjct: 286 ---PLLKLPETTPEIKALCEDLKLLNKKDFKTLIKWRQKMRGWLRALAEEQIRRDGGDGN 342
Query: 300 EEEKVVEDEMDEEEKELMKATKE----IEELKD---EERRELKRKKKKVSKERTKLQEKM 352
++ K + + + E E + LKD +ER ++KR +K+ +K KL+E++
Sbjct: 343 DDNKTDDANGNADGDEEESDEDEDDGLLSALKDAAAKERAKMKRLRKRRTKMNLKLKERL 402
Query: 353 NLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+L+M L +D+ +F L IR+ +QL +T
Sbjct: 403 SLQMDTPQGL---TDDNGTLFDLRGIRSEEQLKAVT 435
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G R+R+AFKL+QLNR+++FL + VC+DLCAAPGGWMQVAK+ M +S
Sbjct: 23 GLRARSAFKLLQLNRQYDFLTGASVCIDLCAAPGGWMQVAKEAMTKNS 70
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V + ++ E+N RPI+KV+EAKA++K R + M K+ ++ + + +++ EK R I
Sbjct: 804 MVQQMKEYERELNARPIKKVMEAKAKRKHRLVKFMGKVNQQAAVIADNDTLTEREKVRQI 863
>gi|294657864|ref|XP_460162.2| DEHA2E19690p [Debaryomyces hansenii CBS767]
gi|218511801|sp|Q6BNQ8.2|SPB1_DEBHA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|199433005|emb|CAG88435.2| DEHA2E19690p [Debaryomyces hansenii CBS767]
Length = 831
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 217/403 (53%), Gaps = 66/403 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSQLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLNTG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ Y +P K+D +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGYKSPKKMDPRLL 213
Query: 123 DPKYAFKEL--GAEDGKLNALK-KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP+ F+EL G ++ + +K+V + + GY L+ +P+ +FI++E P
Sbjct: 214 DPREVFEELPTGPDNNEAKIFNPEKKVRRRQ--GYEEGDYTLFHEMPLLEFIKNEDPINT 271
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L ++ + Q + +++ L+KSK+C
Sbjct: 272 LGTLNKLSEPP---------QDDHEWKILKKSKLC------------------------- 297
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
T E+ EC KD++VLGRKD ++LLK+ K D KEE +E
Sbjct: 298 ------------TPELLECIKDLKVLGRKDFKHLLKFRKQARDLLGLDAKEETQEI---- 341
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
E E + ED+ E KE++EL ++++++ ++ KK+ ++ + K ++ + ML
Sbjct: 342 EVEPLTEDQQIE---------KELQELTEKQKQKARKAKKQSNEIKQKEIQRSQMNMLTD 392
Query: 360 GDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
++G + E +F L T QL+ ++ K ++ + +E
Sbjct: 393 MNIGIEAAQIGAESLFNLKTAIKTGQLEKLSKGKKKMIFNDEE 435
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
K + Q DI R +R +K WK VLHD
Sbjct: 83 KALPNCITFQ---SDITTEDCRSQLRGHMKTWKADTVLHD 119
>gi|408391037|gb|EKJ70421.1| hypothetical protein FPSE_09415 [Fusarium pseudograminearum CS3096]
Length = 840
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 218/460 (47%), Gaps = 84/460 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++ CR + R LK D V HDG+PNVG W DA+ Q L L +LKLA+ L+
Sbjct: 92 DITSEDCRATLKRLLKHALCDTVCHDGAPNVGTAWTQDAFDQNALVLQSLKLATEFLRPD 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY SLLW+FKQLF +V +TKP +SR S+EIFVVC+ Y AP K+D +F
Sbjct: 152 GTFVTKVFRSKDYNSLLWVFKQLFNKVEATKPSSSRNVSSEIFVVCRGYKAPKKMDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP Y F EL A + +V+K K GY + + +K +P S+FI+ P +L
Sbjct: 212 DPTYVFAELAGPTPNNEAKVYNPEVKKRKRDGYDEENFLQFKEMPASEFIQTTDPIAVLG 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
K F Q V L A
Sbjct: 272 SYN-------------------KLSFQQPRNGDVALAA---------------------- 290
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGGEGEE 300
+ K P TT EI+ C D+RVLGRKD + LLKW KV E +K E
Sbjct: 291 ---LDKLPETTEEIRNSCSDLRVLGRKDFKLLLKWRLKVREIFGFETKKALNTA----ET 343
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
EE + MDEE +K +E+E++KD+E + +R+K++ ++ + + +M L M
Sbjct: 344 EEVAEVESMDEE----LKIQQELEDMKDKENSKRRREKRRENERKQREIVRMQLNMTAPM 399
Query: 361 DLGPTEN---DDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVEKS 417
D+G E + +F L ++ TD + + K IVP + S
Sbjct: 400 DIGMEEAGPIGEGAIFSLKKVDKTDAMRRLNRGKM------------IVPSQAPQKQFDS 447
Query: 418 ELDDSGLYYKNPDDSDLEFESSSEDENDVEKKLVEEEFDT 457
L SG ++DE+D E+ +E E D+
Sbjct: 448 GLGSSG---------------ETDDESDPEEDRLERELDS 472
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KS+V +DLCAAPG W+QVA + M S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSRVLLDLCAAPGSWLQVAAEVMPQGSLIVGCDLSPIK 81
>gi|380489859|emb|CCF36420.1| Spb1 domain-containing protein [Colletotrichum higginsianum]
Length = 851
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 220/441 (49%), Gaps = 73/441 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATIRSHLKTWKADCVLHDGAPNVGTAWNQDSFNQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCKGYKAPKRIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP+ F EL +D N K +V+K K GY +K + S+FI P +
Sbjct: 212 DPRAVFAEL--KDATPNNEAKVYNPEVKKRKREGYEEGDYTQFKVVSASEFIHSVDPIAI 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L ++ F Q P G + +A
Sbjct: 270 LGQTNQL-------------------SFDQ----------PPNGDVALA----------- 289
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---WKVLHDEKTEKEKEEEKEGG 296
++ K P TT EI+ C D++VLGRK+ + LLKW + + T+K +E+K
Sbjct: 290 ----ALDKLPETTDEIRRNCADLKVLGRKEFKQLLKWRLKVREIFGFPTKKTVQEKKSLQ 345
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEEL--------KDEERRELKRKKKKVSKERTKL 348
+ EE + MDEE ++ +E+E L K E R+E ++K++ + + + +
Sbjct: 346 DQVGEEVAEVESMDEE----LRIQQELEALKNKDDSKKKKERRKENEKKQRDIVRMQLNM 401
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE--EHIDIV 406
M++ M G LGP + MF L ++ I K + +S++ E IV
Sbjct: 402 VAPMDIGMEQAGPLGP-----DAMFALKTADKAGGINKIARGKMAILKESEKKAEEAGIV 456
Query: 407 PKKIKYNVEKSELDD--SGLY 425
+ +VE+ L+ G+Y
Sbjct: 457 YSDSESDVEEDRLERELDGMY 477
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV VDLCAAPG W QVA + ++I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVVDLCAAPGSWCQVAAETCPVGALIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRSHLKTWKADCVLHD 117
>gi|254573574|ref|XP_002493896.1| AdoMet-dependent methyltransferase involved in rRNA processing and
60S ribosomal subunit maturation [Komagataella pastoris
GS115]
gi|238033695|emb|CAY71717.1| AdoMet-dependent methyltransferase involved in rRNA processing and
60S ribosomal subunit maturation [Komagataella pastoris
GS115]
gi|328354283|emb|CCA40680.1| hypothetical protein PP7435_Chr4-0516 [Komagataella pastoris CBS
7435]
Length = 828
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 211/398 (53%), Gaps = 72/398 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 95 DITTEDCRSKLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLGVG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY +L+WIF+QLF +V +TKP ASR SAEIFVVC+ + AP ++D +
Sbjct: 155 GTFVTKIFRSKDYNNLMWIFQQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKRIDPRLL 214
Query: 123 DPKYAFKEL--GAEDGKLNALK-KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPK F+E+ GA + + K+V K + GY + + +K LP+ +++ E V
Sbjct: 215 DPKEVFQEVQSGAANNEAKVFNPHKKVRKRE--GYEEEDYLQFKTLPLMDWVKQEVDVVN 272
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
+ L LN+ +D W QV K
Sbjct: 273 I-----------------LGTLNQ---------FTID--KEDPDWKQVKKME-------- 296
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK----VLHDEKTEKEKEEEKEG 295
TT E ECCKD++VLG+KD ++LLKW K +L +K E
Sbjct: 297 ----------QTTKEFLECCKDLKVLGKKDFKHLLKWRKKARLLLELDKVE--------- 337
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
E+E+ +V+ E +EE ++ TKE++EL ER++ KR+K+K ++++ + +M +
Sbjct: 338 ---EKEDALVDVEPLDEEAQI---TKELDELVQNERQKQKREKRKKNEQKQDIIRRMQMN 391
Query: 356 MLLKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASK 391
ML +G + D +F L T +LD + + K
Sbjct: 392 MLTDMQIGVDAVKADSASLFNLKIAERTGKLDDLASGK 429
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 18/105 (17%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESV 245
KGYR+R++FKL+Q+N K+ FL+KS+V +DLCAAPG W QVA Q ++ II D +
Sbjct: 24 KGYRARSSFKLLQINEKYGHFLEKSRVVIDLCAAPGSWCQVASQVCPVNALIIGVDIVQI 83
Query: 246 LKHPS-----TTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P+ + + ++C R +R +K WK VLHD
Sbjct: 84 KPLPNCLTFQSDITTEDC--------RSKLRGHMKTWKADTVLHD 120
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 398 SDEEHIDIVPKKIKYNVEKSEL----DDSGLYYKNPDDSDLEFESSSEDENDV------E 447
S E +IVP K ++N ++ ++ +D+ L N + DL + + V +
Sbjct: 602 SSESEFEIVPPKSQWNEDEMDISDEEEDTNLTKANQKNVDLATVEAMTLAHQVALGRMTK 661
Query: 448 KKLVEE---EFDTDEEDGLGKLLRYWEKSYN------AASLVNEYRKKRVEINVRPIRKV 498
K L+EE ++ + +GL EK ++ + ++K E+N RPI+KV
Sbjct: 662 KDLIEEGINKYSFRQTNGLPAWFIDDEKEHSKIVKPITKEASDAIKEKMRELNARPIKKV 721
Query: 499 VEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIRA 540
+EAK RKK R RR +KM+KK + + + S+ +KA I A
Sbjct: 722 MEAKGRKKMRALRRFEKMRKKSDLINDDSAKSENDKAEQINA 763
>gi|255715916|ref|XP_002554239.1| KLTH0F00704p [Lachancea thermotolerans]
gi|238935622|emb|CAR23802.1| KLTH0F00704p [Lachancea thermotolerans CBS 6340]
Length = 830
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 198/396 (50%), Gaps = 72/396 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ W DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F QLF +V +TKP ASR SAEIFVVC+ + AP KLD++
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFSQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKKLDSRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D + F+EL DG N K K+V K + GY +LY + P+ +F++ E P
Sbjct: 214 DAREVFEEL--PDGPQNNEAKIFNPEKKVRKRQ--GYEEGDYLLYHHKPIMEFVKCEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + + F + + +++ L+K K
Sbjct: 270 DMLGNLNK----------FTVNSEDHEWKILKKLK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + +LKW K E G E
Sbjct: 295 ------------QTTPEFMMCIEDLKVLGKKDFKMILKWRKAAR----------ELLGIE 332
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EEE V + EEE + E++ L++++R KR+K+K ++ + K +M + ML
Sbjct: 333 KEEEPVVETTHLTEEE----QIQSEVQALQEKQRLSQKREKRKKNEMKQKELTRMQMNML 388
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASK 391
D+G E E +F L T LD + K
Sbjct: 389 TPMDIGVESAELGRESLFNLKSAEKTGILDKLAKGK 424
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF F++KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFMEKSKVVIDLCAAPGSWCQVASNLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARK R R++K+KKK + + D S+ +KA I
Sbjct: 717 LNARPIKKVAEAKARKAMRAVARLEKIKKKAGLINDDGDKSEKDKADEI 765
>gi|126138018|ref|XP_001385532.1| AdoMet-dependent rRNA methyltransferase SPB1 (2'-O-ribose RNA
methyltransferase) (S-adenosyl-L-methionine-dependent
methyltransferase) [Scheffersomyces stipitis CBS 6054]
gi|126092810|gb|ABN67503.1| AdoMet-dependent rRNA methyltransferase SPB1 (2'-O-ribose RNA
methyltransferase) (S-adenosyl-L-methionine-dependent
methyltransferase) [Scheffersomyces stipitis CBS 6054]
Length = 831
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 202/398 (50%), Gaps = 58/398 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLAAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFDKVEATKPPASRTVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKEL--GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK F+EL G E+ + + ++ + + GY +LY +P+ +FI E P LL
Sbjct: 214 DPKEVFEELAAGPENSEAKIFRPEKKTRHRT-GYEEGDYLLYHEIPILEFIRSEDPITLL 272
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
++ + + + +++ L+K + C
Sbjct: 273 SSNNKLVEPSKE---------DHEWKILKKLRHC-------------------------- 297
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
T E+ EC KD++VLGRK+ + +LK+ K D ++KE+ + E
Sbjct: 298 -----------TPELLECIKDLKVLGRKEFKLILKFRKEARDLLGLEDKEDLNKSDLVEV 346
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
E E ++D+E +EL K+ + + E SK++ ++ +MN+ +
Sbjct: 347 EPLTEEQQIDKELEELSSKQKQKAKRAKKNANE--------SKQKEIVRNQMNMLTDMNI 398
Query: 361 DLGPTENDDEEMFKLSQIRTTDQLD-LITASKPEVFAD 397
+ + E +F L T QLD L K VF D
Sbjct: 399 GIEAAQIGSESLFNLKTAEKTGQLDKLAKGKKRMVFND 436
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNCITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++K+ ++N RPI+KV+EA+ RKK R RR++K+KKK + + E S+ +KA I
Sbjct: 714 KEKQKQLNARPIKKVLEAQGRKKMRALRRLEKLKKKSDLINEDSGKSERDKAEEI 768
>gi|348675775|gb|EGZ15593.1| hypothetical protein PHYSODRAFT_561340 [Phytophthora sojae]
Length = 883
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 233/442 (52%), Gaps = 76/442 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I +E+++W+ DVVL DG+PNVG + DAY Q L L ALKLA ++ G
Sbjct: 89 DITTTRCRQIIKQEMQSWQADVVLCDGAPNVGAEYSKDAYVQNELALVALKLAVDVMGRG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV+KVFRS+DY +LLW+FKQLF++V +TKP +SR ESAEIFVVC+ ++AP +D K F
Sbjct: 149 GTFVSKVFRSQDYNALLWVFKQLFKKVSATKPLSSRNESAEIFVVCEQFLAPHSIDPKLF 208
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKAL-GYPSDVNVLYKN-LPVSKFIEHETPTVLL 180
DPKY F ++ A++ + K ++ + GY + + N V++FI+ P LL
Sbjct: 209 DPKYVFDQVDAQEKTITIFHPKFGDRKRHREGYDEALGMTLTNECSVTQFIDAHDPIRLL 268
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
T K +FL + V D
Sbjct: 269 TDTT-------------------KIKFLPEDDVYRD------------------------ 285
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTE----KEKEEEKEGG 296
H T+ EI C D++VLG+ D +NLLKW + K E ++ E++ EG
Sbjct: 286 -------HKDTSDEIVTCLSDLKVLGKADFKNLLKWRTRMLKYKKELLKAEKPEDDDEGE 338
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+ +EE K E E+ E+EK+ + +E+ +L+ + + KR+KKK + + KL+ + L M
Sbjct: 339 KPKEESKEPERELTEKEKDAL-VREELSQLRATVQAKKKREKKKERERKQKLRIRAALGM 397
Query: 357 LLKGDLGPTENDDEEMFKLSQIRTT-DQLDLITASKPEVFADSDEEHIDIVPKKIKYNVE 415
+G + TE E F L ++ + D++D + V ADS ++ +++++
Sbjct: 398 DAEG-IDVTEA--ESAFSLKDLKMSKDKVDDLD----NVGADSSDD------EELQFETS 444
Query: 416 KSELDDSGLYYKNPDDSDLEFE 437
E D+GL +DSD E++
Sbjct: 445 DEEDQDAGL-----EDSDAEYD 461
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 45/51 (88%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+AFKLIQLN+K++FL +KVC+DLCAAPGGW QVA + M ASSII
Sbjct: 19 QGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPASSII 69
>gi|443898330|dbj|GAC75665.1| putative SAM-dependent rRNA methyltransferase SPB1 [Pseudozyma
antarctica T-34]
Length = 925
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 221/467 (47%), Gaps = 84/467 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI + KCR + + LK WK D+V+HDG+PNVG WV DAY Q LTL +L+LA L
Sbjct: 93 EDINSYKCRDQLRQILKDWKADIVIHDGAPNVGTAWVQDAYAQSELTLQSLRLAVEFLNA 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY +LLW+F QLF++V +TKP +SR SAEIFVVCQ Y PA++D KF
Sbjct: 153 GGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQGYKNPARIDPKF 212
Query: 122 FDPKYAFKEL---------------------GAEDGKLNALKKKQVEKSKALGYPSDVNV 160
DP++ FKEL A + N K++ K++ GY
Sbjct: 213 LDPRHVFKELDPATLAQEDQEAGVPLSLKGTSAGNAHANVFAPKKIRKNRE-GYADGDYT 271
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
L+ +L FI+ + +L E+ +FK +SK +DL
Sbjct: 272 LFHSLDAMDFIKGQDVIGMLGSYNEI--------SFK----------SDESKTLLDL--- 310
Query: 221 PGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVL 280
P TT E+++ C D++VLG+KD RNL+ W K +
Sbjct: 311 ----------------------------PDTTQEMRDNCSDLKVLGKKDFRNLMNWRKEV 342
Query: 281 H-----DEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELK 335
D K+K+ ++ E EE +D++D+E L + + + EL
Sbjct: 343 RLALGLDMPKSKQKDLAEQIETVEVEEMDEDDQIDDELARLNEEAARKARKERRRKNEL- 401
Query: 336 RKKKKVSKERTKLQEKMNLKM-LLKGDLGPTENDDEEMF---KLSQIRTTDQLDLITASK 391
++KK+ K + ++ M++ M ++ LG D E+ K+S+ Q DL
Sbjct: 402 -RQKKILKMQLQMTTPMDIGMDVMDDQLGSGNGDIFEIGSGEKVSKKALMQQADLSDDES 460
Query: 392 PEVFADSDEEHIDIVPKKIKYNVEKSELDDSGLYYKNPDDSDLEFES 438
+ + D + D + + + E L D + + D D +F +
Sbjct: 461 DTIVSSHDTDDDDPQARAARLDAEMDALYDE--FKQKQSDRDAKFRA 505
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL+K++ C+DLCAAPGGW+QVA + M A+S+I D +K
Sbjct: 24 QGYRSRAAFKLVQLNKKYNFLEKARCCIDLCAAPGGWLQVASKYMPANSLIVGVDLVPIK 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ E + R +R +LK WK V+HD
Sbjct: 84 PIPRTITFAEDINSYKC--RDQLRQILKDWKADIVIHD 119
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R + ++ RPI+K+ EAKARKK R RR++K +KK ET+ E D+S+ EK+ I
Sbjct: 789 RDRERALDARPIKKIAEAKARKKMRTLRRLEKAQKKAETINENEDISEKEKSSTI 843
>gi|256270950|gb|EEU06076.1| Spb1p [Saccharomyces cerevisiae JAY291]
gi|349576697|dbj|GAA21867.1| K7_Spb1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300725|gb|EIW11815.1| Spb1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 841
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 208/403 (51%), Gaps = 71/403 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP +LD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG+ N K K+V K + GY N+LY + F+ E P
Sbjct: 214 DPKEVFEEL--PDGQQNMESKIYNPEKKVRKRQ--GYEEGDNLLYHETSILDFVRTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + + + +++ L+K K
Sbjct: 270 SMLGEMNK----------FTIDENDHEWKILKKLK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E + C +D++VLG+KD + +L+W K+ + + K++ K
Sbjct: 295 ------------QTTDEFRSCIEDLKVLGKKDFKMILRWRKIAREILGIEVKDDAK---- 338
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E +VV + EEE + K+++ L++++R +KR++++ ++ + K ++M + M+
Sbjct: 339 --TEIEVV--PLTEEE----QIEKDLQGLQEKQRLNIKRERRRKNEMKQKELQRMQMNMI 390
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQL-DLITASKPEVFAD 397
D+G E +F L T L DL K +F D
Sbjct: 391 TPTDIGIEAASLGKESLFNLKTAEKTGILNDLAKGKKRMIFTD 433
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARK+ R R++K+KKK + + D ++ +KA I
Sbjct: 728 MNARPIKKVAEAKARKRMRAVARLEKIKKKAGLINDDSDKTEKDKAEEI 776
>gi|6319796|ref|NP_009877.1| Spb1p [Saccharomyces cerevisiae S288c]
gi|6226708|sp|P25582.2|SPB1_YEAST RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase; AltName: Full=Suppressor of PAB1
protein 1
gi|1907120|emb|CAA42391.1| putative methylase [Saccharomyces cerevisiae]
gi|151943780|gb|EDN62080.1| AdoMet-dependent rRNA methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|285810648|tpg|DAA07432.1| TPA: Spb1p [Saccharomyces cerevisiae S288c]
Length = 841
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/403 (33%), Positives = 208/403 (51%), Gaps = 71/403 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP +LD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG+ N K K+V K + GY N+LY + F+ E P
Sbjct: 214 DPKEVFEEL--PDGQQNMESKIYNPEKKVRKRQ--GYEEGDNLLYHETSILDFVRTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + + + +++ L+K K
Sbjct: 270 SMLGEMNK----------FTIDENDHEWKILKKLK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E + C +D++VLG+KD + +L+W K+ + + K++ K
Sbjct: 295 ------------QTTDEFRSCIEDLKVLGKKDFKMILRWRKIAREILGIEVKDDAK---- 338
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
E +VV + EEE + K+++ L++++R +KR++++ ++ + K ++M + M+
Sbjct: 339 --TEIEVV--PLTEEE----QIEKDLQGLQEKQRLNVKRERRRKNEMKQKELQRMQMNMI 390
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQL-DLITASKPEVFAD 397
D+G E +F L T L DL K +F D
Sbjct: 391 TPTDIGIEAASLGKESLFNLKTAEKTGILNDLAKGKKRMIFTD 433
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARK+ R R++K+KKK + + D ++ +KA I
Sbjct: 728 MNARPIKKVAEAKARKRMRAVARLEKIKKKAGLINDDSDKTEKDKAEEI 776
>gi|339244263|ref|XP_003378057.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
gi|316973066|gb|EFV56698.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
Length = 633
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 208/407 (51%), Gaps = 78/407 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ C I RELKTW D VLHDGSPNVG NW +DA+ Q LTL AL+LAS IL+ G
Sbjct: 91 DITTESCLSQIKRELKTWTADCVLHDGSPNVGKNWNHDAFQQAQLTLHALRLASAILRPG 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLF-------QRVHSTKPQASRKESAEIFVVCQHYIAPA 115
GWFVTK+FRSKD+ +L+ + K+LF ++VH TKPQASR+ESAEI+ VCQ + PA
Sbjct: 151 GWFVTKLFRSKDHPTLVNVMKKLFNKVKLAGKKVHVTKPQASRQESAEIYAVCQGF-KPA 209
Query: 116 KLDTKFFDPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHE 174
T K FKEL E K L + + +K KA GY + LY + +FI
Sbjct: 210 D-STVSLSFKSVFKELDLEPQKTKINLFRPEKQKRKAEGYAEGCDTLYNRVSAGEFI--- 265
Query: 175 TPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
D GG Q+
Sbjct: 266 --------------------------------------TSSDYLEILGGANQLL------ 281
Query: 235 SSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLH-DEKTEKEKEEEK 293
DD + HP+T+ EI++ C+D++VLGR+++R L+ W + L D K E E + +
Sbjct: 282 -----LDDPKIADHPATSDEIKQLCEDVKVLGRRELRQLISWRRKLRSDFKAESETLKRQ 336
Query: 294 EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E +EMD E +E K E+EE E + K+K+KK KE+ + ++K+
Sbjct: 337 SDANLE------NNEMDSEAEEEAKIDAELEEAMKSETKVSKKKRKKEFKEKRRQKKKLE 390
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
M++K D+ + +D +F + Q + ASKP+ ++DS+E
Sbjct: 391 YNMVIKDDVADIQ-EDRRLFSI-------QNAIEKASKPQ-YSDSEE 428
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+ LN+KF+FL+KS VDLCAAPGGW+QVA Q M S +I D +K
Sbjct: 22 GYRSRAAFKLVHLNKKFQFLEKSTCLVDLCAAPGGWLQVASQYMPVSRLIIGVDLVSIKA 81
Query: 249 PSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ +Q L + ++ LK W VLHD
Sbjct: 82 LHNVITLQNDITTESCLSQ--IKRELKTWTADCVLHD 116
>gi|164656501|ref|XP_001729378.1| hypothetical protein MGL_3413 [Malassezia globosa CBS 7966]
gi|159103269|gb|EDP42164.1| hypothetical protein MGL_3413 [Malassezia globosa CBS 7966]
Length = 902
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 204/423 (48%), Gaps = 81/423 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI + +CR + +K WK DVVLHDG+PNVG WV DAY Q LTL +L+LA L
Sbjct: 92 EDINSYRCREQLQEHMKDWKADVVLHDGAPNVGTAWVQDAYAQNELTLQSLRLAVEFLVP 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY +L+W+F+QLF V +TKP +SR SAEIFVVCQ + +++D KF
Sbjct: 152 GGTFVTKVFRSKDYNNLMWVFQQLFHHVEATKPPSSRNVSAEIFVVCQRFKNLSRIDPKF 211
Query: 122 FDPKYAFKELGAEDGKLNALKKKQV-------EKS--KALGYPSDVNVLYKNLPVSKFIE 172
DP+Y FKEL L + + EKS K GY LYK + +I
Sbjct: 212 LDPRYVFKELDPSGKDLLGTSSQNLLENVLNPEKSRRKREGYEEGNYTLYKTIGADAYIR 271
Query: 173 HETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+L G +R F D+
Sbjct: 272 GADAVAML--------GTYNRITFD-----------------TDV--------------- 291
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEE 292
D++ L+HP+T +I+ C+D++VLGR+D +L+KW K + + ++
Sbjct: 292 ---------DKTYLQHPATNDDIKANCEDLKVLGRRDFSSLMKWRKAVRQSMNLDARPDK 342
Query: 293 KEGGEGEEEEKVV--EDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQE 350
E E + + ED MDE E+ L +E R ++++++ ++ R K +
Sbjct: 343 TESHNVTVEMEPLNEEDAMDE----------ELARLNEEASRRARKERRRRNEARAKSLQ 392
Query: 351 KMNLKMLLKGDLGPTEND----DEEMFKLSQI-------RTTDQLDLITASKPEVFADSD 399
K+ L M L D G D E+MF L + R + +DL+ A + + ++D
Sbjct: 393 KLQLNMTLPADAGEDWQDRALQGEDMFSLDSVNRRPALERGANSVDLLDADEAQSSDNND 452
Query: 400 EEH 402
+ H
Sbjct: 453 DVH 455
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL+ + C+DLCAAPGGW+QVA ++M +S+I D +K
Sbjct: 23 QGYRSRAAFKLVQLNKKYNFLENAHCCIDLCAAPGGWLQVASKHMPPNSLILGVDLVAIK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ E R R+ ++ +K WK VLHD
Sbjct: 83 PIPRCITFAEDINSYRC--REQLQEHMKDWKADVVLHD 118
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R ++ ++ RPI+KV EAKARKK R A R+++ +KK E + E D+S+ EKA NI
Sbjct: 784 VEALRARQRALDARPIKKVAEAKARKKHRAAMRLERAQKKAEAINENADLSEREKAENI 842
>gi|384501460|gb|EIE91951.1| hypothetical protein RO3G_16662 [Rhizopus delemar RA 99-880]
Length = 692
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 199/368 (54%), Gaps = 67/368 (18%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
+KTWK DVVLHDG+PNVG W +DA+ Q L L +LKLA+ L +GG FVTKVFRSKDY
Sbjct: 1 MKTWKADVVLHDGAPNVGRAWAHDAFSQSELVLVSLKLATEFLSKGGTFVTKVFRSKDYN 60
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDG 136
L+W+F+QLF++V +TKP +SR SAEIFVVC+ +IAP K+D + DPK F ++GAE+
Sbjct: 61 KLIWVFQQLFRKVEATKPPSSRNVSAEIFVVCRDFIAPKKIDPRMLDPKAVFSDVGAEEP 120
Query: 137 -KLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAA 195
KL + + + +K GY L+K L V +FI + P V L
Sbjct: 121 KKLADVFRPEKKKRHRDGYEDGDYTLHKTLDVMEFIRADDPIVTL--------------- 165
Query: 196 FKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDES--VLKHPSTTV 253
G + Q DES +LK TT
Sbjct: 166 --------------------------GSYNQ----------FTFSSDESRELLKRDITTE 189
Query: 254 EIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEE 313
+I+ C+D++VLGR + + LLKW + DE +K+EEK V+E+E +E+
Sbjct: 190 DIKINCEDLKVLGRGEFKALLKWRTTIRDEFKMDKKKEEK--------MTVIEEEPMDED 241
Query: 314 KELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTEN--DDEE 371
+ L E+ L EE + KR+K+K ++++ KL ++M L M++ D+ +N ++E
Sbjct: 242 EML---EAELSNLTKEEAAKRKREKRKANEKKMKLIQRMQLNMIVPTDIALDDNGLGEDE 298
Query: 372 MFKLSQIR 379
+F + +I+
Sbjct: 299 IFNIKKIK 306
>gi|255732365|ref|XP_002551106.1| hypothetical protein CTRG_05404 [Candida tropicalis MYA-3404]
gi|240131392|gb|EER30952.1| hypothetical protein CTRG_05404 [Candida tropicalis MYA-3404]
Length = 632
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 190/353 (53%), Gaps = 68/353 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLAAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKAL----GYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F+ELGAE + N K EK + GY LY +P+ +FI+ E P
Sbjct: 214 DPKEVFEELGAEK-QNNEAKVFNPEKFASTRQRQGYEEGDYTLYHTMPIMEFIKEEDPID 272
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
KL LN KF+ K++ W + K +
Sbjct: 273 ------------------KLGTLN-KFDIPDKNE--------DHEWKIITKSKIF----- 300
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD--------EKTEKEKE 290
T E+ EC KD++VLG+K+ ++L+++ + D +KT + E
Sbjct: 301 -------------TPELAECAKDLKVLGKKEFKHLIRFRQKARDLLGLNDKVDKTPIDVE 347
Query: 291 EEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSK 343
EE +EEK+ D E +ELM+ ++ ++ + ++ RE+K + K+ SK
Sbjct: 348 EEL-----NDEEKI-----DRELQELMQKMEKQKQKRVKKLREIKAQSKQASK 390
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPVNSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNVITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
>gi|402219812|gb|EJT99884.1| FtsJ-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 881
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 149/290 (51%), Gaps = 58/290 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR + LK W+ DVVLHDG+PNVG WV DAY Q L L +LKLA L +G
Sbjct: 93 DITTPRCRTLLRESLKDWQADVVLHDGAPNVGTAWVQDAYTQSELVLMSLKLAVEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +LLW+F QLF RV +TKP +SR SAEIFVVC+ ++APAK+D KF
Sbjct: 153 GTFVTKVFRSADYNNLLWVFNQLFGRVEATKPPSSRNVSAEIFVVCRDFLAPAKIDPKFL 212
Query: 123 DPKYAFKELG----AEDGKLNALKKKQV-----EKSKALGYPSDVNVLYKNLPVSKFIEH 173
+PK+ FKEL E+ +N + V ++ + GY L+ + F+
Sbjct: 213 NPKHVFKELSMSKPTENAAMNVNAHENVFQPSKKRRQRDGYAEGDYTLFHSATAEDFVRG 272
Query: 174 ETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+ P LL G +R F
Sbjct: 273 DDPITLL--------GTNNRITF------------------------------------- 287
Query: 234 ASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE 283
I +++S LK P TT ++ C D++VLG+ D + LLKW + +E
Sbjct: 288 ----ISAEEKSWLKLPCTTEDVSANCADLKVLGKGDFKALLKWRATIREE 333
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ +K C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYNFLESAKCCIDLCAAPGGWLQVASKYMPVNSVIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ R R +R LK W+ VLHD
Sbjct: 83 AIPRVITHAADITTPRC--RTLLRESLKDWQADVVLHD 118
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 458 DEEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARKKKRQAR 511
+++DGL E+ Y +L V R K+ ++ RPI+KV EAKARKK R R
Sbjct: 730 NDKDGLPSWFLDEEQKYYRTNLPITKDAVAAIRAKQRALDARPIKKVAEAKARKKIRAVR 789
Query: 512 RMDKMKKKLETLMEAPDVSDAEKARNI 538
R++ KK + + + ++S+ EKA I
Sbjct: 790 RLEAAMKKAQGVSDTTEMSEREKAAQI 816
>gi|68491995|ref|XP_710224.1| potential rRNA methyltransferase [Candida albicans SC5314]
gi|73621935|sp|Q59KF3.1|SPB1_CANAL RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|46431386|gb|EAK90959.1| potential rRNA methyltransferase [Candida albicans SC5314]
Length = 845
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 212/416 (50%), Gaps = 59/416 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGA--EDGKLNALKKKQVEKSKA----LGYPSDVNVLYKNLPVSKFIEHETP 176
DPK F+ELG E + N K EK + GY L+ +P+ FI+ + P
Sbjct: 214 DPKEVFEELGGGNESKQNNEAKIFNPEKFSSQRQRQGYQEGDYTLFHTMPIMDFIKQDDP 273
Query: 177 TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
L + + +++ L K K+C
Sbjct: 274 INQLGSLNKFDLPAPKDDDNDDDDHDHEWKILSKLKLC---------------------- 311
Query: 237 IIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGG 296
T E+ EC KD++VLGRK+ + +LK+ K D + E+E+E
Sbjct: 312 ---------------TPELLECIKDLKVLGRKEFKMILKFRKQARDILGIDKDEKEEE-- 354
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS--KERTKLQEKMNL 354
EE K+ + + EE+ K +E+++L ++++++ KR KK + K++ ++ +MN+
Sbjct: 355 --EENPKIEVEPLTEEQ----KIDQELQDLINKQKQKAKRLKKNANELKQKEIIRNQMNM 408
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLD-LITASKPEVFAD-----SDEEHID 404
+ + + + +F L T QLD L K +F D +E HID
Sbjct: 409 LTDMNIGIEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMIFNDEELAKDNEIHID 464
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNVITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 40/55 (72%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++K+ ++N RPI+KV+EA++RKK R +R++K+KKK + + E S+ +KA I
Sbjct: 728 KEKQKQLNARPIKKVLEAQSRKKLRALKRLEKIKKKSDLINEDSGKSERDKADEI 782
>gi|71020429|ref|XP_760445.1| hypothetical protein UM04298.1 [Ustilago maydis 521]
gi|73621943|sp|Q4P6G5.1|SPB1_USTMA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|46100114|gb|EAK85347.1| hypothetical protein UM04298.1 [Ustilago maydis 521]
Length = 921
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 199/404 (49%), Gaps = 86/404 (21%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI + KCR + + LK WK D+V+HDG+PNVG WV DAY Q LTL +L+LA L
Sbjct: 93 EDINSYKCRDQLRQILKDWKADIVIHDGAPNVGTAWVQDAYAQSELTLQSLRLAVEFLTA 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY +LLW+F QLF++V +TKP +SR SAEIFVVCQ Y PA++D KF
Sbjct: 153 GGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQGYKNPARIDPKF 212
Query: 122 FDPKYAFKEL---------------------GAEDGKLNALKKKQVEKSKALGYPSDVNV 160
DP++ FKEL A + N + K++ +++ GY
Sbjct: 213 LDPRHVFKELDPASLADQDQEAGVPLSLKGTSAGNAHANVFEPKKIRRNRE-GYADGDYT 271
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
L+ +L FI+ + D+
Sbjct: 272 LFHSLDAMDFIKGQ-----------------------------------------DVIGM 290
Query: 221 PGGWMQVAKQNMMASSIIHFDDES--VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK 278
G + Q++ ++ DES +L P T E++E C D++VLG+KD RNL+ W K
Sbjct: 291 LGSYNQISFES----------DESKKLLSLPDTNDEMRENCSDLKVLGKKDFRNLMNWRK 340
Query: 279 VLH-----DEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRE 333
+ D K ++ ++ E EE +D++D+E L + + + E
Sbjct: 341 EVRLALGIDLPKSKHQDLAEQTQTVEVEEMDEDDQIDDELARLNEEAARKARKERRRKNE 400
Query: 334 LKRKKKKVSKERTKLQEKMNLKM-LLKGDLGPTENDDEEMFKLS 376
L ++KK+ K + ++ M++ M ++ LG D MF++S
Sbjct: 401 L--RQKKILKMQLQMTTPMDIGMDVMDDQLGAGNGD---MFEIS 439
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+KF FL+K++ C+DLCAAPGGW+QVA + M A+S+I D +K
Sbjct: 24 QGYRSRAAFKLVQLNKKFNFLEKARCCIDLCAAPGGWLQVASKFMPANSLIVGVDLVPIK 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ E + R +R +LK WK V+HD
Sbjct: 84 PIPRTITFAEDINSYKC--RDQLRQILKDWKADIVIHD 119
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+ R+++ ++ RPI+KV EAKARKK R RR++K +KK ET+ E D+S+ EK+ I
Sbjct: 781 IQALRERQRALDARPIKKVAEAKARKKMRTLRRLEKAQKKAETINENEDISEKEKSNTI 839
>gi|328856745|gb|EGG05865.1| hypothetical protein MELLADRAFT_48684 [Melampsora larici-populina
98AG31]
Length = 884
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 201/396 (50%), Gaps = 71/396 (17%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI TD CR + ELK WK DVVLHDG+PNVG WV DA+ Q L L + KLA+ +L
Sbjct: 92 EDIRTDSCRRWLRSELKDWKADVVLHDGAPNVGTAWVQDAFSQAELVLHSFKLATEMLAP 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY SLL++F QLF++V STKP +SR SAEIFVVCQ ++AP K+D +
Sbjct: 152 GGTFVTKVFRSKDYNSLLYVFNQLFKKVESTKPPSSRNVSAEIFVVCQDFLAPKKIDPRL 211
Query: 122 FDPKYAFKEL--------GAEDGKLNALK-------KKQVEKSKALGYPSDVNVLYKNLP 166
DP + FK+L G +G N L K + +K GY +L+K +
Sbjct: 212 LDPAHVFKDLDLVPIAADGDTEGHSNKLTPNAQNVFKPEKKKRARDGYEDGDYILHKTVA 271
Query: 167 VSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQ 226
++ I+ P LL A + G
Sbjct: 272 ATELIKANDPIKLLGVANTITFGKTD---------------------------------- 297
Query: 227 VAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTE 286
+D+ +LK T+ I +D++VLG+ + + +LKW + +
Sbjct: 298 --------------EDKMILKMKCTSKAILTDLQDLKVLGKGEFKKILKWRLAVREILGL 343
Query: 287 KEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERT 346
K K+ E ++ V +DE+E + +E++ +++E + KR++++++++RT
Sbjct: 344 TIK---KDPAEDLPQDAVEIQPLDEDE----EMEQELQRIQEESGLQKKRERRRLNEKRT 396
Query: 347 KLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTD 382
+ ++M L+M D+G E D+E+F L +I D
Sbjct: 397 RDLQRMQLQMTTPMDIG-LERADDEVFGLEEIDQND 431
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN++++FL+ ++ C+DLCAAPGGW+QVA + M A+S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKRYQFLESARCCIDLCAAPGGWLQVAAKWMPANSLILGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V E DIR R+ +R+ LK WK VLHD
Sbjct: 83 PIPKVVTATE---DIRTDSCRRWLRSELKDWKADVVLHD 118
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R K ++ RPI+KV EAK RKK R RR++KM+ K + + D+++ EK+ I
Sbjct: 765 RDKMRALDARPIKKVAEAKGRKKLRTLRRIEKMQNKANLVNASSDLTEKEKSGEI 819
>gi|300124014|emb|CBK25285.2| unnamed protein product [Blastocystis hominis]
Length = 840
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 149/288 (51%), Gaps = 55/288 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT CR I REL DVVLHDG+PNVG W DA+ Q L L +L+LA + +
Sbjct: 88 EDITTLSCRDVIKRELHGKHADVVLHDGAPNVGGGWSKDAFDQNSLVLHSLRLAVEFMTK 147
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FVTKVFRS DY +L++IF QLF++V +TKP ASR ESAEIFVVCQ+Y AP+ +D KF
Sbjct: 148 GATFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTESAEIFVVCQNYKAPSYIDPKF 207
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNV-LYKNLPVSKFIEHETPTVLL 180
+P YAFK++GA ++N K K GY D+ + L + + V F+ P +L
Sbjct: 208 LNPDYAFKQVGAPKQEVNLFASKNPRKRFREGYDEDLGLGLKRVISVKDFMTRSDPIRVL 267
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
A E + F
Sbjct: 268 SEAHE----------------------------------------------------LRF 275
Query: 241 DDESV--LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTE 286
D++S L+ P TT E++ CC D+RVL + D + LLKW + EK E
Sbjct: 276 DEDSAAFLESPLTTEEVRACCSDLRVLNKNDFKMLLKWRLQMLKEKKE 323
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLNR+F FL K+ V +DLCAAPGGW QVA + M S I D +K
Sbjct: 19 QGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQMPIESTIIGVDLLPIK 78
Query: 248 HPSTTVEIQECCKDIRVLGRKDV 270
QE DI L +DV
Sbjct: 79 PIHNVKTFQE---DITTLSCRDV 98
>gi|310792520|gb|EFQ28047.1| Spb1 domain-containing protein [Glomerella graminicola M1.001]
Length = 852
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 196/367 (53%), Gaps = 56/367 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I LKTWK D VLHDG+PNVG W D+++Q L L ++KLA+ L EG
Sbjct: 92 DITTDKCRATIRSHLKTWKADCVLHDGAPNVGTAWNQDSFNQAELVLQSMKLATEFLVEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+F QLF +V +TKP +SR SAEIFVVC+ Y AP ++D +F
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCKGYKAPKRIDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP+ F EL +D N K +V+K K GY +K + S+FI P +
Sbjct: 212 DPRAVFAEL--KDPTPNNEAKVYNPEVKKRKREGYEEGDYTQFKVVSASEFIHSVDPIAI 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L ++ F Q P G + +A
Sbjct: 270 LGQTNQL-------------------SFDQ----------PPNGDVALA----------- 289
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---WKVLHDEKTEKEKEEEKEGG 296
++ K P TT +I+ C D++VLGRK+ + LLKW + + T+K +++K
Sbjct: 290 ----ALDKLPETTDDIRRNCADLKVLGRKEFKQLLKWRLKVREIFGFPTKKTTQQKKSLQ 345
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKM 356
+ EE + MDEE ++ +E+E LK++E + K++++K ++++ K +M L M
Sbjct: 346 DQVGEEVAEVESMDEE----LRIQQELEALKNKEDSKKKKERRKENEKKQKDIVRMQLNM 401
Query: 357 LLKGDLG 363
+ D+G
Sbjct: 402 VAPMDIG 408
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV VDLCAAPG W QVA + ++I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVVDLCAAPGSWCQVAAETCPVGALIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R+ LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRSHLKTWKADCVLHD 117
>gi|50550277|ref|XP_502611.1| YALI0D09251p [Yarrowia lipolytica]
gi|73621944|sp|Q6C9Q1.1|SPB1_YARLI RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49648479|emb|CAG80799.1| YALI0D09251p [Yarrowia lipolytica CLIB122]
Length = 850
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 212/408 (51%), Gaps = 32/408 (7%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTD CR + + +KTWK D V+HDG+PNVGM W DA+ Q L L +LKLA L +G
Sbjct: 94 DITTDHCRQQLRQYMKTWKADTVMHDGAPNVGMAWAQDAFTQSELVLQSLKLAVEFLNKG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +L+W+F+Q F++V +TKP +SR SAEIFVVC + AP K+D +
Sbjct: 154 GTFVTKVFRSKDYNNLMWVFQQFFEKVEATKPPSSRNVSAEIFVVCLKFKAPKKIDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
D KY F+E+ + A + +V++ K GY + +K L + FI TP L
Sbjct: 214 DAKYVFEEVSQGNNNNEAKVFNPEVKRRKREGYEEGEYLQHKRLSILDFITDSTPIDNLG 273
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
E+ RS + ++ K G +Q + + +
Sbjct: 274 ETNEMTWTPRS--------IKEGEVDEEEEKEKDKEARDERGNVQYVLDDKV------YS 319
Query: 242 DESVLKH----PSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
DE LK P TT E+ EC KD++VLGRK+ R +LK W++ + + +K E G E
Sbjct: 320 DEDALKMVSKLPQTTPELLECLKDLKVLGRKEFRAILK-WRLSARDLLQIDKPE--AGVE 376
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EEEE + +D+E EL + K ++ + R E+K+++ ++M + M
Sbjct: 377 VEEEELDEDQLIDKELSELGEREKARKKRERRRRNEMKQRE----------IQRMQMNMT 426
Query: 358 LKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDI 405
+LG E +F L Q T +L + K +++ +EH+ +
Sbjct: 427 TPTELGIEAAKMESLFNLKQAERTGKLSELQKGKRSHVSETGDEHVTL 474
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N+K+ +FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINQKYGKFLEKSKVVIDLCAAPGSWCQVASQLCPVNSLIIGCDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
K + Q DI R+ +R +K WK V+HD
Sbjct: 83 KPLPNVITFQS---DITTDHCRQQLRQYMKTWKADTVMHD 119
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 32/161 (19%)
Query: 410 IKYNVEKSELDDSGLYYKNPDDSDLEF---ESSSEDENDVE------------------- 447
++Y+ + E DD + + DDSD+E+ ES S+DE +++
Sbjct: 625 LEYSDSEDEEDDIVMETQKQDDSDIEYVHGESDSDDEPNIDLVTDQAMTMAHQLATGQTN 684
Query: 448 -KKLVEEEFDT---DEEDGLGKLLRYWEKSYNAAS------LVNEYRKKRVEINVRPIRK 497
KL ++ ++ + DGL + + E +N + V ++K +N RPI+K
Sbjct: 685 KHKLQDDGYNRYSFRDLDGLPQWFQDDENKHNKLNKPITKEAVEALKQKMKTLNARPIKK 744
Query: 498 VVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V+EAK RKK R RR+++MKKK E + E S+ EKA +I
Sbjct: 745 VLEAKGRKKMRALRRLEQMKKKSELINEDGARSEKEKADDI 785
>gi|300121815|emb|CBK22389.2| unnamed protein product [Blastocystis hominis]
Length = 840
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 148/288 (51%), Gaps = 55/288 (19%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT CR I REL DVVLHDG+PNVG W DA+ Q L L +L+LA + +
Sbjct: 88 EDITTLSCRDVIKRELHGKHADVVLHDGAPNVGGGWSKDAFDQNSLVLHSLRLAVEFMTK 147
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FVTKVFRS DY +L++IF QLF++V +TKP ASR ESAEIFVVCQ+Y AP+ +D KF
Sbjct: 148 GATFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTESAEIFVVCQNYKAPSYIDPKF 207
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNV-LYKNLPVSKFIEHETPTVLL 180
+P YAFK +GA ++N K K GY D+ + L + + V F+ P +L
Sbjct: 208 LNPDYAFKHVGAPKQEVNLFASKNPRKRFREGYDEDLGLGLKRVISVKDFMTRSDPIRVL 267
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
A E + F
Sbjct: 268 SEAHE----------------------------------------------------LRF 275
Query: 241 DDESV--LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTE 286
D++S L+ P TT E++ CC D+RVL + D + LLKW + EK E
Sbjct: 276 DEDSAAFLESPLTTEEVRACCSDLRVLNKNDFKMLLKWRLQMLKEKKE 323
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLNR+F FL K+ V +DLCAAPGGW QVA + M S I D +K
Sbjct: 19 QGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQMPIESTIIGVDLLPIK 78
Query: 248 HPSTTVEIQECCKDIRVLGRKDV 270
QE DI L +DV
Sbjct: 79 PIHNVKTFQE---DITTLSCRDV 98
>gi|336369156|gb|EGN97498.1| hypothetical protein SERLA73DRAFT_110750 [Serpula lacrymans var.
lacrymans S7.3]
Length = 871
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 199/397 (50%), Gaps = 81/397 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I E+K WK DVVLHDG+PNVG W+ DAY Q L L +LKLA L +G
Sbjct: 93 DITTPQCRNLIRSEVKDWKADVVLHDGAPNVGTAWIQDAYSQSELVLMSLKLAVEFLVKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 153 GTFVTKVFRSVDYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFL 212
Query: 123 DPKYAFKEL----------GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIE 172
DPK+ FK+L A + + N + ++ ++ K GY L+K + S+F++
Sbjct: 213 DPKHVFKDLSASAPVDMGTSANNAQANVFQPEK-KRRKRDGYDDGDYTLFKKMTASEFVK 271
Query: 173 HETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
P +L G ++ AF+ + + W
Sbjct: 272 GTNPIGVL--------GTINKIAFETDEEKQ--------------------W-------- 295
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKT----EKE 288
LK TT +I+ C D++VLG+ D + L++W L +E K+
Sbjct: 296 -------------LKLDITTGDIKANCDDLKVLGKGDFKALIRWRIALREETGMDLKTKD 342
Query: 289 KEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKL 348
E+ E E EE V D+ EE E+E L E K+ +++ ++ + K
Sbjct: 343 TEDITEAAETTEEVDV--DQQIEE---------ELERLNAEAATRTKQDRRRANEAKRKT 391
Query: 349 QEKMNLKMLLKGDLGPTEND------DEEMFKLSQIR 379
++M L+M D+G ++D E++F L +++
Sbjct: 392 IQRMQLQMTAPLDIGLEQHDLSLGMGQEDVFDLDEVQ 428
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M A+S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWLQVASKYMPANSVIIGVDLVAIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R +R+ +K WK VLHD
Sbjct: 83 PIPRVVTF---ASDITTPQCRNLIRSEVKDWKADVVLHD 118
>gi|260941558|ref|XP_002614945.1| hypothetical protein CLUG_04960 [Clavispora lusitaniae ATCC 42720]
gi|238851368|gb|EEQ40832.1| hypothetical protein CLUG_04960 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 152/278 (54%), Gaps = 49/278 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + LKTWK D VLHDG+PNVG+ WV DA+ Q L L ALKLA L +G
Sbjct: 94 DITTEDCRSKLRGHLKTWKADTVLHDGAPNVGLGWVQDAFTQSQLVLKALKLACENLTQG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY +L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP K+D +
Sbjct: 154 GTFVTKVFRSKDYNNLMWVFQQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKKMDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKS--KALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK F+EL E+ N K EK K GY +LYK +P++ F+ E P L
Sbjct: 214 DPKEVFEELPTENTN-NEAKVFNPEKHTRKRQGYEEGDYLLYKEMPLADFVRDEEPINTL 272
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
++ + + +++++ L+K + C
Sbjct: 273 GSLNKLTEPPKD---------DKEWKMLRKLRHC-------------------------- 297
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK 278
T E +EC KD+RVLG+KD + +LK+ K
Sbjct: 298 -----------TPEFRECIKDLRVLGKKDFKLILKFRK 324
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASNLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
K + Q DI R +R LK WK VLHD
Sbjct: 83 KPLPNCITFQS---DITTEDCRSKLRGHLKTWKADTVLHD 119
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K+ E+N RPI+KV+EA+ RKK R RR++K+KKK + + E S+ +KA I
Sbjct: 708 REKQKELNARPIKKVLEAQGRKKMRALRRLEKIKKKSDMINEDGAKSERDKAEEI 762
>gi|68491984|ref|XP_710229.1| potential rRNA methyltransferase [Candida albicans SC5314]
gi|46431392|gb|EAK90964.1| potential rRNA methyltransferase [Candida albicans SC5314]
Length = 853
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 211/418 (50%), Gaps = 62/418 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGA--EDGKLNALKKKQVEKSKA----LGYPSDVNVLYKNLPVSKFIEHETP 176
DPK F+ELG E + N K EK + GY L+ +P+ FI+ + P
Sbjct: 214 DPKEVFEELGGGNESKQNNEAKIFNPEKFSSQRQRQGYQEGDYTLFHTMPIMDFIKQDDP 273
Query: 177 TVLLQHAT--EVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
L ++ + +++ L K K+C
Sbjct: 274 INQLGSLNKFDLPAPKDDDNDDDDHDHDHEWKILSKLKLC-------------------- 313
Query: 235 SSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
T E+ EC KD++VLGRK+ + +LK+ K D +K+
Sbjct: 314 -----------------TPELLECIKDLKVLGRKEFKMILKFRKQARDILG-----IDKD 351
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS--KERTKLQEKM 352
E EE K+ + + EE+ K +E+++L ++++++ KR KK + K++ ++ +M
Sbjct: 352 EEEEEENPKIEVEPLTEEQ----KIDQELQDLINKQKQKAKRLKKNANELKQKEIIRNQM 407
Query: 353 NLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLD-LITASKPEVFAD-----SDEEHID 404
N+ + + + + +F L T QLD L K +F D +E HID
Sbjct: 408 NMLTDMNIGIEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMIFNDEELAKDNEIHID 465
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNVITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 119
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++K+ ++N RPI+KV+EA+ RKK R +R++K+KKK + + E S+ +KA I
Sbjct: 736 KEKQKQLNARPIKKVLEAQGRKKLRALKRLEKIKKKSDLINEDSGKSERDKADEI 790
>gi|353240472|emb|CCA72340.1| probable SPB1-required for ribosome synthesis, putative methylase
[Piriformospora indica DSM 11827]
Length = 1111
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 193/393 (49%), Gaps = 75/393 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR + ELK WK DVVLHDG+PNVG W+ DAY Q L L +L+LA L +G
Sbjct: 93 DITTSNCRSLLRGELKDWKADVVLHDGAPNVGTAWIQDAYSQAELVLMSLRLAVEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F+QLF +V +TKP ASR SAEIFVVC+ + AP +D KF
Sbjct: 153 GTFVTKVFRSTDYNNLIWVFQQLFAKVEATKPPASRNVSAEIFVVCREFHAPKYIDPKFL 212
Query: 123 DPKYAFKELGAED--GKLNALKKKQV---------EKSKALGYPSDVNVLYKNLPVSKFI 171
DPK+ FKEL E G V ++ K GY LYK + F+
Sbjct: 213 DPKHVFKELAPESTGGIDKGTSANNVHANVFMPDKKRRKRDGYDEGDYTLYKTISAKDFV 272
Query: 172 EHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
+ T++G R I ++K E G W
Sbjct: 273 YGDA-------LTQLGTANR-------ITFDKKDE-------------EEGAW------- 298
Query: 232 MMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEE 291
LK TT E+ C+D++VLG+ D + L+KW + + K EE
Sbjct: 299 --------------LKSEITTKEVLANCEDLKVLGKGDFKALMKWRAAIGLDVKTKPAEE 344
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
E E EEE +++M E E+E L E + KR K++ ++++TK ++
Sbjct: 345 LTETVEVVEEEVDEDEQMQE----------ELERLSKEAAAKAKRDKRRANEKKTKTIQR 394
Query: 352 MNLKMLLKGDLGPTENDD------EEMFKLSQI 378
M L+M+ D+G DD E+MF LS +
Sbjct: 395 MQLRMVAPMDIGQELVDDSLQYGQEDMFDLSTV 427
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 9/100 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +SII D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYNFLESARCCIDLCAAPGGWLQVASKYMPPNSIIVGVDLVPIK 82
Query: 248 HPS--TTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
TT + R L +R LK WK VLHD
Sbjct: 83 PIPRVTTFAADITTSNCRSL----LRGELKDWKADVVLHD 118
>gi|256079102|ref|XP_002575829.1| ribosomal RNA methyltransferase [Schistosoma mansoni]
gi|360044011|emb|CCD81557.1| putative ribosomal RNA methyltransferase [Schistosoma mansoni]
Length = 885
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 202/382 (52%), Gaps = 64/382 (16%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITTDKC+ + EL K DVVLHDG+PNVG W D Y Q L+L + +A+ L+
Sbjct: 90 VADITTDKCKQILRSELNDLKADVVLHDGAPNVGAAWSIDEYTQAVLSLNSFAIATEFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRS+DY L W+ Q F+ V + KP+ASR ESAEIF+V Q+YIAPA++D K
Sbjct: 150 RGGWFVTKVFRSRDYEPLKWVLSQFFRTVRAIKPEASRLESAEIFLVGQNYIAPARIDPK 209
Query: 121 FFDPKYAFKELGAEDGKLNALKK--KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
F D ++ F E+ A + + K+ K KA GY + + LY LP+SKF+E P
Sbjct: 210 FLDARHVFGEVDAPKDRAALISSFLKESRKKKAEGY-DEGDTLYHELPLSKFLESSDPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L A +KV D+ ++A + S I
Sbjct: 269 ALAKA---------------------------NKVIFDVP-------EIACHPLTTSLI- 293
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEEKEGGE 297
+E DI+VLG+ D++NLLKW K+L K E KE +
Sbjct: 294 -----------------KEDFNDIQVLGKGDIKNLLKWRMKILSVLKA-----ESKESKD 331
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
EE + + + E+E++L T E++ L DEE + K+K KKV KE+ KL E+ LKM
Sbjct: 332 SIEESNLPKRDTGEDEEDLEVET-EVQRLWDEEEKLKKKKMKKVRKEKRKLAERYVLKMS 390
Query: 358 LKGDLGPTENDDEEMFKLSQIR 379
+ D E +D+E+F L+ I+
Sbjct: 391 HESDY--IEQNDDELFSLAAIK 410
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
G+RSRAAFKLIQLNR+F+FL SKV +DLCAAPGGW+QVA + M M S II D +
Sbjct: 23 GFRSRAAFKLIQLNRRFKFLNSSKVLIDLCAAPGGWLQVAAKEMPMTSHIIGVDLVPIHP 82
Query: 248 HPSTTVEIQECCKD-IRVLGRKDVRNLLKWWKVLHD 282
P + + D + + R ++ N LK VLHD
Sbjct: 83 IPKVKTFVADITTDKCKQILRSEL-NDLKADVVLHD 117
>gi|388855633|emb|CCF50856.1| probable SPB1-required for ribosome synthesis, putative methylase
[Ustilago hordei]
Length = 928
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 150/298 (50%), Gaps = 71/298 (23%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI + KCR + + LK WK D+V+HDG+PNVG W+ DAY Q LTL +L+LA L
Sbjct: 92 EDINSYKCRDQLRQILKDWKADIVIHDGAPNVGTAWIQDAYAQSELTLQSLRLAVEFLNA 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY +LLW+F QLF++V +TKP +SR SAEIFVVCQ Y PA++D KF
Sbjct: 152 GGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQGYKNPARIDPKF 211
Query: 122 FDPKYAFKEL---------------------GAEDGKLNALKKKQVEKSKALGYPSDVNV 160
DP + FKEL A + N + K+V K + GY
Sbjct: 212 LDPHHVFKELDPAALAPEDQEAGVPLSLKGTSAGNAHANVFEPKKVRKHRE-GYADGDYT 270
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
L+ +L F++ + +L E+ ++S + KL+ L
Sbjct: 271 LFHSLDAMDFVKGQDVVGMLGSYNEI--SFKSDESRKLLHL------------------- 309
Query: 221 PGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK 278
P TT E++E C D++VLG+KD RNL+ W K
Sbjct: 310 ----------------------------PDTTDEMRENCSDLKVLGKKDFRNLMNWRK 339
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL+K++ C+DLCAAPGGW+QVA ++M A+S+I D +K
Sbjct: 23 QGYRSRAAFKLVQLNKKYNFLEKARCCIDLCAAPGGWLQVAAKHMPANSLIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ E + R +R +LK WK V+HD
Sbjct: 83 PIPRTITFAEDINSYKC--RDQLRQILKDWKADIVIHD 118
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 459 EEDGLGKLLRYWEKSYNAASL------VNEYRKKRVEINVRPIRKVVEAKARKKKRQARR 512
++DGL E+ Y A++ V R+++ ++ RPI+KV EAKARKK R RR
Sbjct: 761 DKDGLPTWFLDDEQKYYKANIPITKEAVQALRERQRALDARPIKKVAEAKARKKMRTLRR 820
Query: 513 MDKMKKKLETLMEAPDVSDAEKARNI 538
++K +KK ET+ E D+S+ EK+ I
Sbjct: 821 LEKAQKKAETINENEDISEKEKSSTI 846
>gi|213402435|ref|XP_002171990.1| AdoMet-dependent rRNA methyltransferase spb1 [Schizosaccharomyces
japonicus yFS275]
gi|212000037|gb|EEB05697.1| AdoMet-dependent rRNA methyltransferase spb1 [Schizosaccharomyces
japonicus yFS275]
Length = 795
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 198/380 (52%), Gaps = 64/380 (16%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDIT+D+CR + LKTWK DVV+HDG+PNVG W+ DAY Q L L A+KLA L
Sbjct: 91 VEDITSDRCRSQLRGYLKTWKADVVVHDGAPNVGAAWLQDAYGQAELVLMAMKLACEFLG 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GG FVTKVFRSKDY +L+W+FKQLF +V +TKP +SR SAEIFVVC+ Y AP KLD +
Sbjct: 151 PGGTFVTKVFRSKDYNNLIWVFKQLFNKVEATKPPSSRNVSAEIFVVCRGYKAPHKLDPR 210
Query: 121 FFDPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHET 175
F DPK F+++ AE + KKK+ + GY + L+K +PV FI +
Sbjct: 211 FTDPKSVFEDVPEPTPNAEAKVFHPEKKKRSRE----GYAENDYTLHKVVPVVDFIRADD 266
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
P +L + E+G A K+ +++
Sbjct: 267 PINILGTSAEIGFPEDDEEAQKIRKMS--------------------------------- 293
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
+E V+ + C D++VLG+KD R+LL+W K + G
Sbjct: 294 ----ITNEDVISY----------CSDLQVLGKKDFRDLLRW--------RLKVRALYGLG 331
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
+ + E +V + E E E + +E+E L + ER +LKR++++ ++ + K +M +
Sbjct: 332 KKNKPEGEVAQVEEMPEMDEEERLDQELESLNEVERAKLKRERRRNNERKKKEITRMQMG 391
Query: 356 MLLKGDLGPTENDDEEMFKL 375
M D+G + EE+F L
Sbjct: 392 MEAPMDIGLEQIVGEEVFGL 411
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL+K++V +DLCAAPGGW+QVA + S+I D + +K
Sbjct: 23 QGYRSRAAFKLVQLNKKYNFLEKARVVIDLCAAPGGWLQVASKTCKPGSLIVGVDLAPIK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ E R R +R LK WK V+HD
Sbjct: 83 PIPNCITFVEDITSDRC--RSQLRGYLKTWKADVVVHD 118
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R+K +N RPI+KV+EA+ RKK R ++M ++ KK E + + D+++ EKA+ I
Sbjct: 674 VAALREKMKALNARPIKKVLEAQGRKKLRAMKKMQRVAKKAEGITSS-DMTEGEKAKEI 731
>gi|393244661|gb|EJD52173.1| FtsJ-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 879
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 193/397 (48%), Gaps = 71/397 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR + ELK WK DVVLHDG+PNVG W+ DAY Q L L +LKLA L++
Sbjct: 93 DITTTQCRNQLRAELKDWKADVVLHDGAPNVGTAWIQDAYSQSELVLMSLKLAVEFLRKD 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFRS DY SL+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 153 GTFITKVFRSTDYNSLIWVFSQLFGKVEATKPPSSRNVSAEIFVVCREFLAPKTIDPKFL 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQ-------VEKSKALGYPSDVNVLYKNLPVSKFIEHET 175
DPK+ FKELGA GK + Q ++ + GY L+K ++F+
Sbjct: 213 DPKHVFKELGAAAGKGTSAGNVQENVFQPEKKRRQREGYADGDYTLFKQCNAAEFVRAPD 272
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
P +L ++
Sbjct: 273 PIAVLGTVNKI------------------------------------------------- 283
Query: 236 SIIHFDDES-VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
+ + D+E L+ TT EI+ CC D++VLG+ D + LLKW L ++ K ++ E
Sbjct: 284 -VFNTDEEKEWLQSELTTDEIKLCCDDLKVLGKGDFKALLKWRITLREDIGLDVKTKDTE 342
Query: 295 GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNL 354
E DE + E EL E L E KR++++ +++RTK ++M L
Sbjct: 343 ELTETVEVTEEVDEDQQIEDEL-------ERLNAEAAARAKRERRRANEKRTKTIQRMQL 395
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASK 391
M D+G +E+ S + D DL TA K
Sbjct: 396 HMTAPLDIG------QELQDQSLVGQDDMFDLDTAEK 426
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+R+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGFRARSAFKLIQLNKKYGFLEHARCCIDLCAAPGGWLQVASKYMPVNSLIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R +R LK WK VLHD
Sbjct: 83 PIPRVVTF---ASDITTTQCRNQLRAELKDWKADVVLHD 118
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R K+ ++ RPI+K+ EAK RKK R ARR++K K E + + ++++ EKA I
Sbjct: 755 VQALRAKQRALDARPIKKIAEAKGRKKMRAARRIEKAMKTAEGVNASTELTEKEKAAQI 813
>gi|238882966|gb|EEQ46604.1| AdoMet-dependent rRNA methyltransferase SPB1 [Candida albicans
WO-1]
Length = 737
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 213/417 (51%), Gaps = 63/417 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 96 DITTEDCRSRLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 156 GTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 215
Query: 123 DPKYAFKELGA--EDGKLNALKKKQVEKSKA----LGYPSDVNVLYKNLPVSKFIEHETP 176
DPK F+ELG E + N K EK + GY L+ +P+ FI+ + P
Sbjct: 216 DPKEVFEELGGGNESKQNNEAKIFNPEKFSSQRQRQGYQEGDYTLFHTMPIMDFIKQDDP 275
Query: 177 TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
L + + + +++ L K K+C
Sbjct: 276 INQLGSLNKF--DLPAPKDDDNDDHDHEWKILSKLKLC---------------------- 311
Query: 237 IIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD-EKTEKEKEEEKEG 295
T E+ EC KD++VLG+K+ + +LK+ K D +K++EEEKE
Sbjct: 312 ---------------TPELLECIKDLKVLGKKEFKMILKFRKQARDILGIDKDEEEEKEE 356
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVS--KERTKLQEKMN 353
E E + E++ K +E+++L ++++++ KR KK + K++ ++ +MN
Sbjct: 357 NPEIEVEPLTEEQ---------KIDQELQDLINKQKQKAKRLKKNANELKQKEIIRNQMN 407
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLD-LITASKPEVFAD-----SDEEHID 404
+ + + + + +F L T QLD L K +F D +E HID
Sbjct: 408 MLTDMNIGIEAAQIGADSLFNLKTAEKTGQLDKLAKGKKKMIFNDEELAKDNEIHID 464
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 25 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 84
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 85 KPLPNVITFQSDITTEDC-------RSRLRGHMKTWKADTVLHD 121
>gi|343425309|emb|CBQ68845.1| probable SPB1-required for ribosome synthesis, putative methylase
[Sporisorium reilianum SRZ2]
Length = 915
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/277 (40%), Positives = 156/277 (56%), Gaps = 29/277 (10%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI + KCR + + LK WK D+V+HDG+PNVG WV DAY Q LTL +L+LA L
Sbjct: 93 EDINSYKCRDQLRQILKDWKADIVIHDGAPNVGTAWVQDAYAQSELTLQSLRLAVEFLNA 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRSKDY +LLW+F QLF++V +TKP +SR SAEIFVVCQ Y PA++D KF
Sbjct: 153 GGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQGYKNPARIDPKF 212
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
DP++ FKEL D A + +Q +L S N + N+ K I
Sbjct: 213 LDPRHVFKEL---DPAALAAEDQQAGVPLSLKGTSAGNA-HANVFEPKKIRRNR------ 262
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+GY + + L +F++ D+ G + Q++ ++ + ++
Sbjct: 263 ------EGY-ADGDYTLFHSLDAMDFIKGQ----DVIGMLGSYNQISFKSDESKKLLDLA 311
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK 278
D TT E++E C D++VLG+KD RNL+ W K
Sbjct: 312 D--------TTDEMRENCSDLKVLGKKDFRNLMNWRK 340
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QLN+K+ FL+K++ C+DLCAAPGGW+QVA + M A+S+I D +K
Sbjct: 24 QGYRSRAAFKLVQLNKKYNFLEKARCCIDLCAAPGGWLQVASKFMPANSLIVGVDLVPIK 83
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ E + R +R +LK WK V+HD
Sbjct: 84 PIPRTITFAEDINSYKC--RDQLRQILKDWKADIVIHD 119
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R ++ ++ RPI+K+ EAKARKK R RR++K ++K ET+ E D+++ EK+ I
Sbjct: 775 VQALRDRQRALDARPIKKIAEAKARKKMRALRRLEKAQQKAETINENEDITEKEKSNTI 833
>gi|443918328|gb|ELU38835.1| rRNA METHYL-TRANSFERASE [Rhizoctonia solani AG-1 IA]
Length = 860
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 186/389 (47%), Gaps = 78/389 (20%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT CR + ELK WK DVVLHDG+PNVG WV DAY Q L L +LKLA L
Sbjct: 89 QDITTSACRAQLRNELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLSP 148
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVCQ Y+AP +D KF
Sbjct: 149 GGTFVTKVFRSVDYNNLVWVFNQLFGKVEATKPPSSRNVSAEIFVVCQGYLAPQHIDPKF 208
Query: 122 FDPKYAFKE------------LGAEDGKLNALKKKQVEKSKAL--GYPSDVNVLYKNLPV 167
DPK+ FK+ + A+ G Q EK + GY L+ +
Sbjct: 209 LDPKHVFKDVTAVPPIPSTSRIAAQPGSKAHNNVFQPEKKRRARDGYADGDYTLFHAIGA 268
Query: 168 SKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
S+ + P +L G ++ FK +
Sbjct: 269 SELVHSHDPVTIL--------GSSNQITFKTDE--------------------------- 293
Query: 228 AKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE---- 283
++ LKH TT EI C+D++VLG+ D + LLKW + +E
Sbjct: 294 --------------EKEWLKHELTTPEILANCEDLKVLGKGDFKRLLKWRIAIREEIGLE 339
Query: 284 ---KTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKK 340
K ++ E E E +EE+ +EDE + + ++ L E KR +++
Sbjct: 340 TKNKPVEDATETVEISEEVDEEQQIEDE--------VLSHSSLQRLTTESAARAKRDRRR 391
Query: 341 VSKERTKLQEKMNLKMLLKGDLGPTENDD 369
+++RT+ +M L+M D+G DD
Sbjct: 392 ANEKRTRTVMRMQLQMTAPLDIGMDFKDD 420
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S+I D ++
Sbjct: 20 QGYRARSAFKLIQLNKKYAFLESARCCIDLCAAPGGWLQVASKTMPVNSLIVGVDLVPIR 79
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V +DI R +RN LK WK VLHD
Sbjct: 80 PIPRVVTF---AQDITTSACRAQLRNELKDWKADVVLHD 115
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R K+ ++ RPI+KV EAKARKK R +R++K KK E + + D+++ EKA I
Sbjct: 739 RAKQRALDARPIKKVAEAKARKKLRAQQRLEKALKKAEGVNDTDDMTEKEKAAQI 793
>gi|50285125|ref|XP_444991.1| hypothetical protein [Candida glabrata CBS 138]
gi|73621936|sp|Q6FX63.1|SPB1_CANGA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49524294|emb|CAG57891.1| unnamed protein product [Candida glabrata]
Length = 837
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 237/482 (49%), Gaps = 90/482 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ W DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSRLRGYMKTWKADTVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K + GY ++LY V F++ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMEAKIYNPEKKVRKRQ--GYEEGDHLLYHECSVLDFVKSEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + Q + +++ L++ K
Sbjct: 270 TVLGEMNK----------FTVEQDDPEWKILKRLK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + LLKW K D G +
Sbjct: 295 ------------QTTNEFMACIEDLKVLGKKDFKMLLKWRKASRD----------ILGLD 332
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+E++ +E E EE+++ KE+ +L+++++++ KR+K++ ++E+ K +M + ML
Sbjct: 333 KDEDKGDIEIEPLNEEEQI---EKELRDLQEKQKQKQKREKRRKNEEKQKELTRMQMNML 389
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE------EHID--IVP 407
D+G + +F L T LD + K V DE HID IV
Sbjct: 390 TPTDIGIEAANIGRDSLFNLKTAEKTGILDKLAKGKKRVIFTEDEIAQDNDLHIDENIV- 448
Query: 408 KKIKYNVEKSELDD-----SGLY--YKN-PDDSDLEFESSSEDENDVEKKLVEEEFDTDE 459
I+ + +E+DD + +Y YKN + D F + DVE + E D
Sbjct: 449 --IRDRHDMNEVDDLEGELNAMYQDYKNRKAERDANFRAKQARGGDVEDEWTGFEGTKDS 506
Query: 460 ED 461
ED
Sbjct: 507 ED 508
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSRLRGYMKTWKADTVLHD 119
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EA+ARKK R +R++K+KKK + + D S+ +KA I
Sbjct: 723 LNARPIKKVAEARARKKMRAVKRLEKIKKKAGLINDDSDKSEKDKAEEI 771
>gi|358060513|dbj|GAA93918.1| hypothetical protein E5Q_00564 [Mixia osmundae IAM 14324]
Length = 893
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 148/285 (51%), Gaps = 44/285 (15%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITTD CR AI E+K WK DVVLHDG+PNVG W+ DA+ Q L L +LKLA+ L
Sbjct: 92 EDITTDACRRAIRAEVKDWKADVVLHDGAPNVGTAWIQDAFTQAELVLASLKLATEFLAP 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRS DY SL+++F QLF+RV +TKP +SR SAEIFVVCQ ++AP K+D +F
Sbjct: 152 GGTFVTKVFRSSDYNSLMFVFNQLFKRVEATKPPSSRNVSAEIFVVCQGFLAPRKIDPRF 211
Query: 122 FDPKYAFKEL----------GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFI 171
D K F +L ED + K +++ K P+ +NV +
Sbjct: 212 LDAKSVFSDLDMMAATSAKSAGEDTEAEGGKPRKINKL----TPNALNVFHPEKKRRNRE 267
Query: 172 EHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
+ L H T + +R L+ K F ++
Sbjct: 268 GYADGDYTLHHTTPANEYITTRDPIDLLARTNKISFESTEEL------------------ 309
Query: 232 MMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+LK+ TT +I+ C+D++VLG+++ + LLKW
Sbjct: 310 ------------ELLKNAETTEDIRVSCEDLKVLGKREFKQLLKW 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQ+N+K++FL+ ++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQINKKYQFLESARCCIDLCAAPGGWLQVASKAMPPNSVIVGIDLVAIK 82
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ V I E DI R+ +R +K WK VLHD
Sbjct: 83 PIARCVTIAE---DITTDACRRAIRAEVKDWKADVVLHD 118
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+K+ EAKARKK R RR++K +KK +T+ E D+++ EKA +I
Sbjct: 772 LNARPIKKIAEAKARKKMRTLRRLEKAQKKADTVNETDDITEKEKAASI 820
>gi|393218409|gb|EJD03897.1| FtsJ-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 870
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 196/398 (49%), Gaps = 73/398 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I ELK WK DVVLHDG+PNVG WV DAY Q L L +L+LA L +G
Sbjct: 93 DITTPQCRNLIRGELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLRLAVEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V TKP +SR SAEIFVVC+ + AP +D KF
Sbjct: 153 GTFVTKVFRSADYNNLIWVFNQLFGKVEVTKPPSSRNVSAEIFVVCRDFYAPKHIDPKFL 212
Query: 123 DPKYAFKEL---------GAE--DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFI 171
DPKYAFKEL GA + N ++ + + GY L+K++ ++FI
Sbjct: 213 DPKYAFKELTSSALSTDKGATSINAHANVFMPEKKRRHRD-GYAEGDYTLHKSMTAAEFI 271
Query: 172 EHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
+ P L G +R F+ + +K +D+
Sbjct: 272 KCPDPVSFL--------GSVNRIVFQSEE--------EKQWAALDI-------------- 301
Query: 232 MMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEE 291
TT +I+ +D++VLG+ D + L+KW L E
Sbjct: 302 -------------------TTPDIKANLEDLKVLGKGDFKALIKWRSALRTELGLDNVSV 342
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
E E E ++VE E+D+E+ +E+E E KR+++K ++ +T+ ++
Sbjct: 343 PTE--ELTETVEIVE-EVDQEQ----AIEEELERFNAEASARAKRERRKANEAKTRTIQR 395
Query: 352 MNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITA 389
M L+M D+G ++D L Q D DL TA
Sbjct: 396 MQLQMTAPLDIGLEQSDGN--LGLGQ---DDMFDLETA 428
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ +K C+DLCAAPGGW+QVA + M +SII D ++
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLESAKCCIDLCAAPGGWLQVASKYMPVNSIIVGVDLVPIR 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ DI R +R LK WK VLHD
Sbjct: 83 ---PIPRVSTFAADITTPQCRNLIRGELKDWKADVVLHD 118
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
R ++ ++ RPI+KV EAKARKK + +++ K KK E + E+ D+S+ EKA+ I+
Sbjct: 750 RARQRALDARPIKKVAEAKARKKHKALQKLQKAMKKAEGVNESTDMSEREKAQQIQ 805
>gi|169844171|ref|XP_001828807.1| RNA methyltransferase [Coprinopsis cinerea okayama7#130]
gi|116510178|gb|EAU93073.1| RNA methyltransferase [Coprinopsis cinerea okayama7#130]
Length = 882
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 214/420 (50%), Gaps = 83/420 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR + E+K WK DVVLHDG+PNVG WV DAY Q L L +LKLA L +G
Sbjct: 93 DITTTQCRNYLRGEMKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLAKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY SL+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 153 GTFVTKVFRSVDYNSLIWVFSQLFSKVEATKPPSSRNVSAEIFVVCRDFLAPKFIDPKFL 212
Query: 123 DPKYAFKELGA----------EDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIE 172
DPK+ FK+L + D + N ++ + + GY LY ++PV+KFI
Sbjct: 213 DPKHVFKDLSSLISADKGPTVNDTQSNVFHPEKKRRHRD-GYNDGDYTLYHSIPVTKFIH 271
Query: 173 HETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
P +L G ++ F + + E+L+ + + K ++
Sbjct: 272 SPEPIAIL--------GTYNKITF---DTDEEKEWLK---------------LDITKPDV 305
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD----EKTEKE 288
++ DD VL G+ D ++LLKW L + E T K+
Sbjct: 306 K----LNCDDLKVL-------------------GKGDFKSLLKWRLALREELGLEVTTKQ 342
Query: 289 KEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKL 348
E+ E V+ ++ EE E + ++E+E L E LKR+++K ++ RT+
Sbjct: 343 TEDATE---------VI--DVTEEVDEEQQLSEELERLNAEAAARLKRERRKANEIRTRT 391
Query: 349 QEKMNLKMLLKGDLGPTEND------DEEMFKL--SQIRTTDQLDLITASKPEVFADSDE 400
++M L+M D+G ++D E++F L +Q ++ + IT + ++ D DE
Sbjct: 392 IQRMQLQMTAPLDIGLEQHDAALNLGQEDIFDLEHTQKSLRNRQEFITDADGDILVDDDE 451
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ +DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYGFLESARCTIDLCAAPGGWLQVASKYMPPNSLIIGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ DI R +R +K WK VLHD
Sbjct: 83 PIPRVITF---ASDITTTQCRNYLRGEMKDWKADVVLHD 118
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R+K+ ++ RPI+K+ EAKARKK + +R+++ KK E ++ D+++ EKA+ I
Sbjct: 759 VAALREKQRALDARPIKKIAEAKARKKLKAQQRLERAMKKAEGVISTTDMTEREKAQQI 817
>gi|389742249|gb|EIM83436.1| FtsJ-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 876
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 191/389 (49%), Gaps = 71/389 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR + ELK WK DVVLHDG+PNVG WV DAY Q L L +LKLA L +G
Sbjct: 93 DITTSHCRNLLRGELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ + AP +D KF
Sbjct: 153 GTFVTKVFRSVDYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFHAPKHIDPKFL 212
Query: 123 DPKYAFKEL------GAEDGKLNALKKK--QVEKS--KALGYPSDVNVLYKNLPVSKFIE 172
DPK+ FK+L G + N ++ Q EKS K GY +L+ + VS+F+
Sbjct: 213 DPKHVFKDLSATTATGDKGSSANNVQANVFQPEKSRRKREGYADGDYILFNKVGVSEFVN 272
Query: 173 HETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
P +L ++ + Q + E+ D+ A
Sbjct: 273 SAEPIAVLGSVNQM-----------VFQTEEEKEWAAMDITTTDVKA------------- 308
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEE 292
+ DD ++VLG+ D + LLKW L +E K +
Sbjct: 309 ------NLDD-------------------LKVLGKGDFKTLLKWRTALREELGLDVKTKS 343
Query: 293 KEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKM 352
E + E V E +EE+++ KE+E L E KR+++K ++ +T+ ++M
Sbjct: 344 TE----DATEVVEITEDIDEEEQIQ---KELERLNAEASARTKRERRKANEVKTRTIQRM 396
Query: 353 NLKMLLKGDLGPTEND-----DEEMFKLS 376
L M D+G + D DE+MF L
Sbjct: 397 QLSMTAPLDIGLEQQDQALIADEDMFDLG 425
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ S+ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLESSRCCIDLCAAPGGWLQVASKYMPVNSLIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ DI R +R LK WK VLHD
Sbjct: 83 ---PIPRVSTFAADITTSHCRNLLRGELKDWKADVVLHD 118
>gi|392597296|gb|EIW86618.1| FtsJ-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 852
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 186/376 (49%), Gaps = 65/376 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR + ELK WK DVVLHDG+PNVG WV DAY Q L L +LKLA L +G
Sbjct: 93 DITTTQCRNQLRGELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLVKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 153 GTFVTKVFRSADYNNLVWVFGQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHVDPKFL 212
Query: 123 DPKYAFKELGA-----EDGKLNALKKKQV---EKSKAL--GYPSDVNVLYKNLPVSKFIE 172
DPK+ FK+L A G ++ + V EK + GY L+K + FI
Sbjct: 213 DPKHVFKDLSATVVEGAPGVASSHTQANVFMPEKRRRHRDGYDDGDYTLFKKVGAGDFIR 272
Query: 173 HETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
P +L ++ G GW+ +
Sbjct: 273 SPDPINVLGSVNQIIFGTEEEK----------------------------GWLTMR---- 300
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEE 292
TT +I+ C D++VLG+ D + LLKW L +E K
Sbjct: 301 -----------------VTTPDIKANCDDLKVLGKGDFKALLKWRMSLREELGLDLKTTH 343
Query: 293 KEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKM 352
E E E +E D +E+ ++A E+E L E LKR++++ ++ +TK ++M
Sbjct: 344 AE----EFTEHAEVEEEDVDEEVQIQA--ELERLNQESAARLKRERRRANEIKTKTIQRM 397
Query: 353 NLKMLLKGDLGPTEND 368
L+M D+G ++D
Sbjct: 398 QLQMTAPLDIGLEQHD 413
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLNRK+ FL+ ++ C+DLCAAPGGW+QVA + M A+SII D ++
Sbjct: 23 QGYRARSAFKLIQLNRKYSFLESARCCIDLCAAPGGWLQVASKYMPANSIIVGVDLVPIR 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R +R LK WK VLHD
Sbjct: 83 PIPRVVTF---ASDITTTQCRNQLRGELKDWKADVVLHD 118
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R ++ ++ RPI+K+ EAK RKK + A+R++K KK E + D+S+ EKAR I
Sbjct: 728 VVALRARQRALDARPIKKIAEAKGRKKFKAAQRLEKAMKKAEGVNATSDLSEREKARQI 786
>gi|403214643|emb|CCK69143.1| hypothetical protein KNAG_0C00300 [Kazachstania naganishii CBS
8797]
Length = 841
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 150/285 (52%), Gaps = 56/285 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTD CR + +KTWK D VLHDG+PNVG+ W DA+ Q LTL ALKLA L
Sbjct: 94 DITTDDCRSKLRGYMKTWKADTVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVDNLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSKDYNKLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K + GY N+LY P+ FI+ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMESKIYNPEKKVRKRQ--GYEEGDNLLYHTAPILDFIKDEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + F + + + +++ ++K K
Sbjct: 270 TMLGKLNK----------FTIDEDDHEWQIVKKMK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
T E+ C +D++VLG+KD + +L+W K D
Sbjct: 295 ------------QTNKELLACIEDLKVLGKKDFKMILRWRKNARD 327
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASKLCPINSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
K + Q DI R +R +K WK VLHD
Sbjct: 83 KSMPNVITFQS---DITTDDCRSKLRGYMKTWKADTVLHD 119
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+K+ EAKARKK R R++K+KKK + + D S+ +KA I
Sbjct: 729 LNARPIKKIAEAKARKKMRAVSRLEKIKKKAGLINDDSDKSEKDKAEEI 777
>gi|444314813|ref|XP_004178064.1| hypothetical protein TBLA_0A07550 [Tetrapisispora blattae CBS 6284]
gi|387511103|emb|CCH58545.1| hypothetical protein TBLA_0A07550 [Tetrapisispora blattae CBS 6284]
Length = 867
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 207/405 (51%), Gaps = 69/405 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ W DA+ Q LTL ALKLA L
Sbjct: 94 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFRSKDY L+W+F+Q F++V +TKP ASR SAEIFVVC+ + AP ++D +
Sbjct: 154 GTFITKVFRSKDYNKLIWLFQQFFEKVEATKPPASRNVSAEIFVVCKGFKAPKRIDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N + K+V K + GY N+LY + +F++ E P
Sbjct: 214 DPKEVFEEL--PDGPQNMESRIYNPEKKVRKRQ--GYEEGDNLLYHETDILEFVKTEDPI 269
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L G ++ F + N +++ L+K K
Sbjct: 270 SML--------GVMNKFTFD--KNNTEWQILKKMK------------------------- 294
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGE 297
TT E C +D++VLG+KD + +LKW K +E + ++ E
Sbjct: 295 ------------QTTKEFLSCIEDLKVLGKKDFKMILKW------RKYARELLDIQDESE 336
Query: 298 GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+EE VE +EE+ E KE++ L++++R + KR+K+K ++ + K +M + ML
Sbjct: 337 VVKEEITVEPMTEEEQIE-----KELQNLQEKQRLKNKREKRKKNELKQKELTRMQMNML 391
Query: 358 LKGDLG--PTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDE 400
D+G + +F L+ T LD I K + D+
Sbjct: 392 TPKDIGIDAASIGKDSLFNLNTAEKTGILDKIAKGKKRMVFTEDQ 436
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPINSLIIGVDIVPM 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 119
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R R++K+KKK + + D S+ +K+ I
Sbjct: 753 LNARPIKKVSEAKARKKMRAVARLEKIKKKAGLINDDNDKSERDKSEEI 801
>gi|328772897|gb|EGF82934.1| hypothetical protein BATDEDRAFT_831, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 834
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 151/277 (54%), Gaps = 34/277 (12%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT KCR I ELK WKVDV LHDG+PNVG++W+ DA+ Q LTL ALKLA+ L
Sbjct: 90 VEDITTSKCRQTIRSELKDWKVDVFLHDGAPNVGISWLQDAFGQSELTLSALKLATEFLM 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G FVTKVFRSKDY LLW+F+QLF++V +TKP +SR SAEIFVVC+ Y++P K+D +
Sbjct: 150 PNGTFVTKVFRSKDYNKLLWVFQQLFRKVEATKPASSRNVSAEIFVVCREYLSPKKIDPR 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIE-HETPTVL 179
DPK+ FKEL +KK E+ A+ N L+ +F + ++
Sbjct: 210 LLDPKWVFKELDETKNVDEDDEKKIKERQGAV-----FNTLFNPEKRRRFRDGYDDEDYT 264
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L + V S ++ + + F K +V
Sbjct: 265 LHTSNSVSSFIHSLDFLSIMARSHELTFDSKDEVS------------------------- 299
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+S+ TT I+E KD++VLG+K+ + L+KW
Sbjct: 300 ---KSIFDSALTTDGIKEYLKDLKVLGKKEFKYLIKW 333
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+R+R+AFKLIQLN+K+ FL+K+KV VDLCAAPGGW+QVA++ M S+I D + +K
Sbjct: 22 QGFRARSAFKLIQLNKKYSFLEKAKVVVDLCAAPGGWLQVAQKYMPKPSLIIGLDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKV---LHD 282
S + E + R+ +R+ LK WKV LHD
Sbjct: 82 PISGVITHVEDITTSKC--RQTIRSELKDWKVDVFLHD 117
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETL 523
++ RPIRKV EAK RK+ R RR++KM KK E L
Sbjct: 725 LDARPIRKVAEAKFRKQMRTQRRIEKMSKKAEGL 758
>gi|301123027|ref|XP_002909240.1| rRNA methyltransferase, putative [Phytophthora infestans T30-4]
gi|262100002|gb|EEY58054.1| rRNA methyltransferase, putative [Phytophthora infestans T30-4]
Length = 881
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 149/276 (53%), Gaps = 52/276 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I +E+++W+ DVVL DG+PNVG + DAY Q L L ALKLA ++ G
Sbjct: 89 DITTVRCRQIIKQEMQSWQADVVLCDGAPNVGTEYSKDAYVQNELALIALKLAVDVMGRG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV+KVFRS+DY +LLW+FKQLF++V +TKP +SR ESAEIFVVC+ ++AP +D K F
Sbjct: 149 GTFVSKVFRSQDYNALLWVFKQLFKKVSATKPLSSRNESAEIFVVCEQFLAPHSIDPKLF 208
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKAL-GYPSDVNVLYKN-LPVSKFIEHETPTVLL 180
DPKY F ++ +++ + K ++ + GY + V N V++FI+ P LL
Sbjct: 209 DPKYVFDQVDSQEKTITIFHPKFGDRKRHREGYDEALGVTLTNECSVTQFIDAHDPIRLL 268
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
T V +FL + V D
Sbjct: 269 TDTTRV-------------------KFLPEDDVYRD------------------------ 285
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
H T++EI C D++VLG+ D ++LLKW
Sbjct: 286 -------HKDTSIEIVTCLSDLKVLGKSDFKSLLKW 314
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 45/51 (88%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+AFKLIQLN+K++FL +KVC+DLCAAPGGW QVA + M ASSII
Sbjct: 19 QGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPASSII 69
>gi|403412291|emb|CCL98991.1| predicted protein [Fibroporia radiculosa]
Length = 888
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 203/401 (50%), Gaps = 74/401 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I ELK WK DVVLHDG+PNVG WV DAY Q L L ++KLA+ L +G
Sbjct: 93 DITTPQCRNLIRAELKDWKADVVLHDGAPNVGTAWVQDAYGQSELVLMSMKLAAEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KFF
Sbjct: 153 GTFVTKVFRSVDYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFF 212
Query: 123 DPKYAFKEL--GAEDGKLNALKKK----QVEKSKAL--GYPSDVNVLYKNLPVSKFIEHE 174
DPK+ FK+L A +L++ + Q EK + GY +L+K ++FI +
Sbjct: 213 DPKHVFKDLSVSASTSELSSKNHQVTVFQPEKKRRHRDGYDDGDYILFKKTGAAEFIRSQ 272
Query: 175 TPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
P +L ++ FE ++ W+++ ++
Sbjct: 273 DPIAVLGSVNKI-----------------TFETEEEKD-----------WLKL---DITT 301
Query: 235 SSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE-----KTEKEK 289
S I E C D++VLG+ D + LLKW L +E KT +
Sbjct: 302 SDIT------------------ENCGDLKVLGKGDFKALLKWRTSLREEVGLEVKTMPSE 343
Query: 290 E--EEKEGGEGEEEEKVVEDEMDEEEKELMKAT----KEIEELKDEERRELKRKKKKVSK 343
E E E E +EE +++E K + +++E L E KR +++ ++
Sbjct: 344 ELTETVEITEELDEEAAIQNEACGTNKYSLSLADGILRQLERLNSEAVARAKRDRRRANE 403
Query: 344 ERTKLQEKMNLKMLLKGDLGPTEND------DEEMFKLSQI 378
+T+ ++M L+M D+G ND E++F+L +
Sbjct: 404 IKTRTIQRMQLQMTAPLDIGMEHNDAALKYGQEDVFELGGV 444
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 17/104 (16%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S I+ D S+
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWLQVASKYMPVNSVIVGVDLVSIK 82
Query: 247 KHP-----STTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P ++ + +C R +R LK WK VLHD
Sbjct: 83 PIPHVITFASDITTPQC--------RNLIRAELKDWKADVVLHD 118
>gi|449302456|gb|EMC98465.1| hypothetical protein BAUCODRAFT_87111 [Baudoinia compniacensis UAMH
10762]
Length = 833
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 187/382 (48%), Gaps = 71/382 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I LKTWK D V+HDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 92 DITTDKCRATIRGHLKTWKADTVIHDGAPNVGTAWVQDAFSQNELVLSSLKLATEFLAPQ 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKD L WIFKQLF +V TKP +SR SAE F VC+ + AP LD +F
Sbjct: 152 GTFVTKVFRSKDSAKLEWIFKQLFAKVEQTKPPSSRNVSAETFYVCRGFKAPKHLDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPK+AF E+ E+ +N + + +K K GY + S+F++ + P +
Sbjct: 212 DPKHAFAEV--EEAAVNNEARVFNPEKKKRKREGYEEGDWTQFSEAAASEFVQTQDPIQM 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L LNR F Q+ + L A
Sbjct: 270 LG------------------SLNR-LHFRQEGNGDIALAA-------------------- 290
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
+ K P TT EI+ CC D++VLGRK+ + LL+W + ++K+
Sbjct: 291 -----LDKLPETTEEIRLCCADLKVLGRKEFKMLLRWRLKARERFGFRQKKSSNPAAPSA 345
Query: 300 E------------------EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKV 341
E EE + + MDEE M+ +EI+++KD++ + ++++++
Sbjct: 346 ETTAAGAADDTAAENGIVGEEVAMVEPMDEE----MRLQEEIQQMKDQQSKVKRKERRRE 401
Query: 342 SKERTKLQEKMNLKMLLKGDLG 363
++ + K +M + M ++G
Sbjct: 402 NERKQKEITRMQMNMTTPSEIG 423
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FLQ+SK +DLCAAPG W+QVA + M S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYSFLQQSKCLIDLCAAPGSWLQVAAETMPVKSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ Q + R +R LK WK V+HD
Sbjct: 82 PIPRTITFQGDITTDKC--RATIRGHLKTWKADTVIHD 117
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEA 526
+N RPI+KV EAKARK R ARR++K+++K E L E
Sbjct: 715 LNARPIKKVREAKARKTLRAARRLEKLRRKSEGLAEG 751
>gi|384500180|gb|EIE90671.1| hypothetical protein RO3G_15382 [Rhizopus delemar RA 99-880]
Length = 826
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 194/367 (52%), Gaps = 67/367 (18%)
Query: 24 VVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFK 83
VVLHDG+PNVG W +DA+ Q L L +LKLA+ L +GG FVTKVFRSKDY L+W+F+
Sbjct: 81 VVLHDGAPNVGRAWAHDAFSQSELVLVSLKLATEFLSKGGTFVTKVFRSKDYNKLIWVFQ 140
Query: 84 QLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDG-KLNALK 142
QLF++V +TKP +SR SAEIFVVC+ +IAP K+D + DPK F ++GAE+ KL +
Sbjct: 141 QLFRKVEATKPPSSRNVSAEIFVVCRDFIAPKKIDPRMLDPKAVFSDVGAEEPKKLADVF 200
Query: 143 KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLN 202
+ + +K GY L+K L V +FI + P V L
Sbjct: 201 RPEKKKRHRDGYEDGDYTLHKTLDVMEFIRADDPIVTL---------------------- 238
Query: 203 RKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDES--VLKHPSTTVEIQECCK 260
G + Q DES +LK TT +I+ C+
Sbjct: 239 -------------------GSYNQ----------FTFTSDESRELLKRDITTEDIKINCE 269
Query: 261 DIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKAT 320
D++VLGR + + LLKW + DE +K+EEK V+E+E +E++ L
Sbjct: 270 DLKVLGRGEFKALLKWRTTIRDELKMDKKKEEKIA--------VIEEEPMDEDEML---E 318
Query: 321 KEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTEN--DDEEMFKLSQI 378
E+ L EE + KR+K+K ++++ KL ++M L M++ D+ + ++E+F + +I
Sbjct: 319 AELSNLTKEEAAKRKREKRKANEKKMKLIQRMQLNMIVPTDIALDDGGLGEDEVFNIKKI 378
Query: 379 RTTDQLD 385
+ L+
Sbjct: 379 KKDSSLE 385
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 33/36 (91%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGG 223
+GYR+R+AFKLIQLN+K+ FL+KS+ +DLCAAPGG
Sbjct: 24 QGYRARSAFKLIQLNKKYNFLEKSRALIDLCAAPGG 59
>gi|170574558|ref|XP_001892866.1| rRNA methyltransferase [Brugia malayi]
gi|158601360|gb|EDP38288.1| rRNA methyltransferase, putative [Brugia malayi]
Length = 789
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 149/447 (33%), Positives = 227/447 (50%), Gaps = 91/447 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+K R + +EL W+ D VLHDG+PNVG NWV DA+ Q CLTL AL+LA+ IL +
Sbjct: 92 DITTEKTRQMVRKELHGWEADCVLHDGAPNVGRNWVQDAFQQNCLTLSALRLATQILTKN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS DY L+ +F++LF++VH KP ASR ESAEIFVVC+ Y+ P KLD
Sbjct: 152 GIFVTKIFRSSDYCHLISVFEKLFKQVHVWKPAASRLESAEIFVVCEKYLKPEKLDPDLL 211
Query: 123 DPKYAFKELGAE----DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F E + + +L + +++K A GY ++ L+K + + FI
Sbjct: 212 DPKKVFAESTQQSVISNPQLMLQPRAKLKKVPATGYENESVSLHKTINATDFIHSNNYLE 271
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
LL +A+K I
Sbjct: 272 LLA------------SAYK----------------------------------------I 279
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DDE L + STT E++ C +DI+V G +++R +LKW + + + E EG
Sbjct: 280 ALDDERWLNNESTTDEVKCCLEDIKVCGPRELRLILKWRRNIITKINE----------EG 329
Query: 299 EEEEKVVEDE---MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
E E +D+ ++ E++ + + +++ K EE+ LK+KK+K+ K++ L+++ LK
Sbjct: 330 NETENPTKDDVMAVNPEDERMAEIEQQLSMAKAEEKAALKKKKRKLLKDKANLEKRKKLK 389
Query: 356 MLLKGDLGPTENDDEEMFKLSQI------RTTDQLDLITASKPEVFADSDEEHIDIVPKK 409
ML++GD D++E+F L ++ R D ++ SK E +D+DE
Sbjct: 390 MLVEGDTYEIP-DEQELFSLKKLAIAKNKRCADS--ELSNSKNENESDNDEGC------- 439
Query: 410 IKYNVEKSELDDSGLYYKNPDDSDLEF 436
S+ D+ Y+N DD EF
Sbjct: 440 ------SSDDDNDDYGYENIDDDAEEF 460
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFLQKS+ VDLCAAPGGW+QVA QNM SSI D +K
Sbjct: 23 GYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVAIQNMPVSSICIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ V +Q DI R+ VR L W+ VLHD
Sbjct: 83 INKCVTLQ---GDITTEKTRQMVRKELHGWEADCVLHD 117
>gi|403355179|gb|EJY77159.1| Putative rRNA methyltransferase 3 [Oxytricha trifallax]
Length = 860
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDIT+ +C I +ELK +K DVVL+DG+PNVG +W DAY+Q L L ALKLA+ +L+
Sbjct: 91 EDITSARCLQLIKKELKHFKADVVLNDGAPNVGADWAKDAYNQAELCLFALKLATEVLRR 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFRSKDY SLL++F QLF +V +TKPQASR +SAEIFVVCQ + AP +D KF
Sbjct: 151 GGTFITKVFRSKDYNSLLYVFNQLFNKVEATKPQASRTQSAEIFVVCQGFKAPDVIDPKF 210
Query: 122 FDPKYAF---KELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPKYA ++ ++++LKK +K+ GY ++ LY+ +F+E P V
Sbjct: 211 LDPKYALEEVEDEEDAANQISSLKKLLEKKNNRGGYEENLGSLYQETNFIEFLESTDPYV 270
Query: 179 LL 180
L
Sbjct: 271 FL 272
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+RSRAAFKLIQLN+K++FL SK VDLCAAPGGW+QVA + M +SI
Sbjct: 23 GFRSRAAFKLIQLNKKYDFLSTSKCLVDLCAAPGGWLQVAAKYMPVASI 71
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 491 NVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
N RP +KV EAKARKK+R A+ MDK+K K + + E D+ + K R I+
Sbjct: 742 NERPSKKVTEAKARKKRRLAKAMDKIKIKAQVIAEQ-DIHEGSKMRQIQ 789
>gi|430812227|emb|CCJ30380.1| unnamed protein product [Pneumocystis jirovecii]
gi|430814238|emb|CCJ28497.1| unnamed protein product [Pneumocystis jirovecii]
Length = 332
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 153/286 (53%), Gaps = 50/286 (17%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR + LKTWK D +LHDG+PNVG++W++DAY Q L L +LK+ + L
Sbjct: 90 VEDITTEKCRGKLRHYLKTWKADTILHDGAPNVGVSWLHDAYSQTELVLMSLKIVAEFLT 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+TK+FRSKDY +LLW+ QLF +V +TKP ASR SAEIFV+CQ Y AP K+D K
Sbjct: 150 YNGTFITKLFRSKDYNNLLWVLNQLFGKVEATKPLASRDVSAEIFVICQEYKAPDKIDPK 209
Query: 121 FFDPKYAFKEL--GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
FFDPK+ F++L ++D + + + + GY + +K + +F+ P
Sbjct: 210 FFDPKFVFEDLPNPSQDHQSRVFNPSKKRRQRD-GYEDGNYIQHKTISAEEFLTSNNPIE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L A + R +K I+
Sbjct: 269 VLSIANAISLDDRDLKNYKGIK-------------------------------------- 290
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEK 284
FD TT EI CC+D+RVLG+KD R LLK W++L EK
Sbjct: 291 DFD--------ITTKEIIACCQDLRVLGKKDFRGLLK-WRILVREK 327
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSR++FKLIQLN+K+ FL+K+KV +DLCAAPGGW+QVA + ++ S+I D +K
Sbjct: 22 QGYRSRSSFKLIQLNKKYHFLEKTKVLIDLCAAPGGWLQVASKYCISGSLICGVDLVPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ E + G+ +R+ LK WK +LHD
Sbjct: 82 PIPNVITFVEDITTEKCRGK--LRHYLKTWKADTILHD 117
>gi|66357152|ref|XP_625754.1| Spb1p-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
gi|46226949|gb|EAK87915.1| Spb1p-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
Length = 1011
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 161/296 (54%), Gaps = 32/296 (10%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++CR I EL VDVVLHDG+PNVG +W DAY Q L L + +LA IL+
Sbjct: 92 DITTERCRKLIFDELNGIPVDVVLHDGAPNVGTSWDKDAYIQNELVLHSAELACEILRPN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY S+LW+ QLF V +TKPQ+SR SAEIF+VC Y AP K+D++FF
Sbjct: 152 GIFVTKVFRSTDYNSVLWVLSQLFNTVKATKPQSSRNVSAEIFLVCLGYKAPKKIDSRFF 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALG--YPSDVNVLYKNL--PVSKFIEHETPTV 178
DPKY F+ E+ +N L LG P D +N +K I +T
Sbjct: 212 DPKYVFQSNKEENEGVNLL---------PLGDDQPMDDESGSENTEDNDNKLINRKTKKS 262
Query: 179 LLQHATEV--GKGYRSRAA------FKLIQLNRKFEFLQKSKVCVDLCAAPGGWM---QV 227
+ +E+ G G R+R F++I ++F + L + + +V
Sbjct: 263 MKSSLSELIKGIGKRNRDGYEKGDDFRMISA---YDFFHAENPPLLLLKSNTINLNPKKV 319
Query: 228 AKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHD 282
+ N + I VL HP T EI+ C+D++VLG+K++ LLKW + VL D
Sbjct: 320 DESNTLERDFIDL----VLNHPKTNHEIKLLCEDLKVLGKKELMQLLKWRFLVLKD 371
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKLIQL +KF + +V VDLCAAPGGW+QVAK+NM SS II D ++
Sbjct: 22 QGYRARSAFKLIQLAQKFNIFKNCQVLVDLCAAPGGWLQVAKRNMGVSSKIIGVDLVAIK 81
Query: 247 KHPSTTV 253
P T
Sbjct: 82 GIPGVTT 88
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+ +YR K EI RPIRK EA ARKK+R + M+K +KK +++ ++ ++++A K++ I
Sbjct: 875 LMAQYRAKLREIKNRPIRKESEALARKKRRYEKVMEKARKKAQSIADSEEMNEASKSKTI 934
Query: 539 RA 540
+
Sbjct: 935 NS 936
>gi|440798353|gb|ELR19421.1| ribosomal RNA large subunit methyltransferase J, putative
[Acanthamoeba castellanii str. Neff]
Length = 777
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 123/185 (66%), Gaps = 5/185 (2%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT +CR AI + L+ W DVV+ DG+PN+G W+ DAY Q L L ALKLA+ L+
Sbjct: 26 EDITTPRCRAAIKKHLQHWNADVVICDGAPNMGKAWIQDAYTQVDLVLKALKLATDFLRP 85
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRS DY +LLW+F Q F++V +TKPQASR SAEI+VVC HY+AP K+D +
Sbjct: 86 GGTFVTKVFRSADYNALLWVFHQFFKKVEATKPQASRNTSAEIYVVCTHYLAPDKIDPRL 145
Query: 122 FDPKYAFKELGAEDGK--LNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
D K+ FKEL K + A KK+V +++ GY L+K V +FIE + P L
Sbjct: 146 LDSKHVFKELDMPLKKPDIFAPVKKKVRANQS-GYEEGNYTLFKTCSVVEFIEAKDP--L 202
Query: 180 LQHAT 184
QHA+
Sbjct: 203 DQHAS 207
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEEEKEGGEGEEEE 302
+H ST I+ CC+D++VL +KD +NLLKW +LH E+ E EK++ EG E E
Sbjct: 204 QHASTE--IKACCQDLKVLNKKDFKNLLKWRLRARSLLHPEEAE-EKKKLAEGLEDVEVA 260
Query: 303 KVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDL 362
+ +EM+E+ KE+E+ E R+ KR+KKK + + KL+++ L M GD
Sbjct: 261 PITREEMEEQ------LDKELEDKMSEIDRKKKREKKKERERKAKLRQRAALGMETPGD- 313
Query: 363 GPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEE 401
G + + ++F + + D DL+ P+ +S E+
Sbjct: 314 GGVQEQEVDLFSAASVLRKDAADLLLDQAPDDVLESPED 352
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V E + K E+N RPI+KV EAKARK R ++++KMK+K + A +S+ EK ++IR
Sbjct: 643 VEEMKAKFRELNERPIKKVAEAKARKHLRMQKKVEKMKQKAAKIATADGMSEREKIKSIR 702
>gi|149236601|ref|XP_001524178.1| AdoMet-dependent rRNA methyltransferase SPB1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452554|gb|EDK46810.1| AdoMet-dependent rRNA methyltransferase SPB1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 799
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 156/288 (54%), Gaps = 60/288 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY +L+W+F+QLF++V +TKP +SR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKVFRSRDYNNLMWVFQQLFEKVEATKPPSSRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKKKQV-----EKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP+ F+EL + K NA ++++ ++ + GY L+ +P+ +FI+ E P
Sbjct: 214 DPREVFEELNND--KKNANNEEKIFNPEKKRRQRQGYEEGDYTLFHTMPIMQFIKEEDPI 271
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L LN KFE
Sbjct: 272 N------------------QLGDLN-KFE------------------------------- 281
Query: 238 IHFDDES---VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
I DD V K + T E++EC KD++VLGRK+ + +L++ K D
Sbjct: 282 IDEDDHEWKIVKKLKTYTEELKECFKDLKVLGRKEFKMILRFRKQARD 329
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
K + Q DI R +R +K WK VLHD
Sbjct: 83 KPLPNCITFQS---DITTEDCRSKLRGHMKTWKADTVLHD 119
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++K+ ++N RPI+KV+EAK RKK R RR++KMKKK + + E S+ +KA I
Sbjct: 714 KEKQKQLNARPIKKVLEAKGRKKMRALRRLEKMKKKSDLINEDSSKSEYDKAAEI 768
>gi|326481598|gb|EGE05608.1| rRNA methyltransferase Spb1 [Trichophyton equinum CBS 127.97]
Length = 791
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 124/218 (56%), Gaps = 9/218 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + KTWK D VLHDG+PNVG WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVC + AP +D KF
Sbjct: 152 GSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNVSAEIFVVCLGFKAPKHIDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK+ F EL E N KKK+ K GY + +K LP ++FI P
Sbjct: 212 DPKHVFAELQDPNPNNEAKVFNPEKKKR----KRDGYEENDWTQHKELPATEFINTTDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCV 215
+L ++ L L R E + ++C+
Sbjct: 268 SILGSYNKLTFTQSPGGDLALATLQRLPETTNEIRMCL 305
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D S +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPSQSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R K WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHFKTWKADTVLHD 117
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV EAK+RKK +QA++++K++KK L E +S+ +KA++I
Sbjct: 675 REKMRAINARPIKKVREAKSRKKFKQAQKLEKLRKKSSLLAEDEGISERDKAQSI 729
>gi|395334612|gb|EJF66988.1| hypothetical protein DICSQDRAFT_131257 [Dichomitus squalens
LYAD-421 SS1]
Length = 893
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 153/282 (54%), Gaps = 42/282 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR I ELK WK DVVLHDG+PNVG WV DAY Q L L +LKLA+ L +G
Sbjct: 93 DITTTNCRNLIRNELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLKLAAEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KFF
Sbjct: 153 GTFVTKVFRSVDYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ FK+L A P++ + KN + F P +H
Sbjct: 213 DPKHVFKDLTAS-------------------APAEEQAVAKNAQANVF----QPEKKRRH 249
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
GY + + L + + +F++ C D A G + ++ D+
Sbjct: 250 RD----GY-ADGDYTLYKDSGAADFVR----CQDPIAFLGTYNKIT---------FKTDE 291
Query: 243 ESVL-KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDE 283
E K TT+++ C+D++VLG+ D + LLKW L +E
Sbjct: 292 EKEWQKLDITTLDVLANCEDLKVLGKGDFKTLLKWRIALREE 333
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWLQVASKYMPLNSVIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R +RN LK WK VLHD
Sbjct: 83 PIPRVVTF---AADITTTNCRNLIRNELKDWKADVVLHD 118
>gi|325189292|emb|CCA23812.1| rRNA methyltransferase putative [Albugo laibachii Nc14]
Length = 874
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 147/280 (52%), Gaps = 58/280 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT KCR I +E++ W+ DVVL DG+PNVG + DAY Q L+L ALKLA+ ++ G
Sbjct: 89 DITTAKCRQIIRQEMQNWQADVVLCDGAPNVGAEYSKDAYVQNELSLVALKLAADVMGRG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
FV+KVFRS+DY +LLW+F+QLF++V +TKP +SR ESAEIFVVC+H++AP +D K F
Sbjct: 149 ATFVSKVFRSQDYNALLWVFRQLFKKVSATKPLSSRNESAEIFVVCEHFLAPHSIDPKLF 208
Query: 123 DPKYAFKELG--AEDGKLNALKKK-QVEKSKALGYPSDVNVLYKN-LPVSKFIEHETPTV 178
DPK F++L A++ + K V+K GY + + N V FI+ P
Sbjct: 209 DPKCVFEQLSDPAQNKTVTIFHPKFGVQKRHRDGYNETLGITLTNEKTVKDFIDASDPI- 267
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
Q + S+ I
Sbjct: 268 ---------------------------------------------------QFLTDSTAI 276
Query: 239 HFDDESVL--KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
F + L +H STT EI C D+RVLG+ D ++LLKW
Sbjct: 277 RFGEGDTLYREHTSTTPEIITCLHDLRVLGKADFKHLLKW 316
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+AFKLIQLN+K++FL +KVC+DLCAAPGGW QVA + M SSII
Sbjct: 19 QGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMPTSSII 69
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+++ R++ +EI +P++KV EA+ RKK++Q ++ K+K + PD+S EK + I
Sbjct: 751 LMDQMRQRFLEIASKPVKKVAEARQRKKRQQLKKAQLAKRKSSEIANQPDLSTREKLKAI 810
>gi|392576542|gb|EIW69673.1| hypothetical protein TREMEDRAFT_71706 [Tremella mesenterica DSM
1558]
Length = 948
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 193/385 (50%), Gaps = 47/385 (12%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITT +CR + + WK D+VLHDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 91 VSDITTPQCRNLLRSHMHDWKADLVLHDGAPNVGSAWVQDAFTQNELVLQSLKLATEFLV 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLLW+F QLF V +TKP +SR SAEIFVVCQ +IAP +D K
Sbjct: 151 KGGNFVTKVFRSQDYNSLLWVFGQLFDSVEATKPPSSRNVSAEIFVVCQGFIAPKHIDPK 210
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVS-KFIEHETPTV- 178
F DPK+ FK++ A + + + + P+ N + N+ + K H
Sbjct: 211 FLDPKHVFKDVAALPTSITQSTGEGSTTAASSSKPAVNNQAHANVFMPEKNRRHRDGYAE 270
Query: 179 ---LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
L H T VG + L+ + EF+ + + GW
Sbjct: 271 GDYTLFHKTTVGDFVKGADPVALLGSMNQIEFVTEEE---------KGW----------- 310
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
LK TT ++ D++VLG+ D + L+KW + + K + +
Sbjct: 311 ----------LKSRHTTPDVLANFADLKVLGKGDFKLLMKWRTAIRLQTGLDVKADATK- 359
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
+ E+V MDEEE + + E+E L++ + + KR+KK+ ++++ K K L
Sbjct: 360 ---DLTEEVNIQPMDEEE----QISAELERLRESKLSQTKREKKRANEKKAKELLKHQLH 412
Query: 356 MLLKGDL---GPTENDDEEMFKLSQ 377
M + DL PT E++F L +
Sbjct: 413 MTVPTDLDFDDPTLG-GEQVFDLGE 436
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 15/103 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKLI LNRK++ L KSK +DLCAAPGGW+QVA++ M S II D +
Sbjct: 23 QGYRARSAFKLIHLNRKYDLLAKSKCTIDLCAAPGGWLQVAEKYMPKGSLIIGVDLHPIR 82
Query: 247 KHPSTTVEIQEC----CKDIRVLGRKDVRNLLKWWK---VLHD 282
P T + + C+++ +R+ + WK VLHD
Sbjct: 83 ALPHVTTFVSDITTPQCRNL-------LRSHMHDWKADLVLHD 118
>gi|398390652|ref|XP_003848786.1| hypothetical protein MYCGRDRAFT_87701 [Zymoseptoria tritici IPO323]
gi|339468662|gb|EGP83762.1| hypothetical protein MYCGRDRAFT_87701 [Zymoseptoria tritici IPO323]
Length = 805
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 185/373 (49%), Gaps = 62/373 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDK R I LKTWK D V+HDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 92 DITTDKTRAIIRGHLKTWKADCVIHDGAPNVGTAWVQDAFSQNELVLCSLKLATEFLAPN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKD L WIFKQLF +V TKP +SR SAE F VC+ Y AP LD +F
Sbjct: 152 GTFVTKVFRSKDSAKLEWIFKQLFAKVEQTKPPSSRNVSAETFYVCRGYKAPKHLDPRFL 211
Query: 123 DPKYAFKELGAEDGKLNALK--KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP++AF E+ E N K +++K K GY +K S+FI+ P +L
Sbjct: 212 DPQHAFSEI-EESAPNNEAKVFNPEIKKRKRDGYEEGDWTQFKECSASEFIQTNDPIAVL 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
K F Q+ A G Q A
Sbjct: 271 GSMN-------------------KLHFRQE---------ANGDIAQAA------------ 290
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW---------WKVLHDEKTEKEKEE 291
+ K P TT E++ CC+D++VLGRK+ + LL+W +V +++ E
Sbjct: 291 ----LDKLPETTDEVRICCEDLKVLGRKEFKTLLRWRLKARDIFGMRVKKTNAEKEKAEA 346
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQ-E 350
EK + EE V + MD+E ++ +EI LKD + + LKRK ++ ER + +
Sbjct: 347 EKAAEDAAGEEVAVVESMDDE----LRLQEEIAALKDTQNK-LKRKDRRKDNERKQKEIV 401
Query: 351 KMNLKMLLKGDLG 363
+M + M ++G
Sbjct: 402 RMQMGMTTPSEIG 414
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FLQ +K +DLCAAPG W+QVA + M S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYSFLQNAKCLIDLCAAPGSWLQVAAEIMPQKSLIVGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK V+HD
Sbjct: 82 PIPKAITFQGDITTDKT--RAIIRGHLKTWKADCVIHD 117
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 473 SYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDA 532
S AA+ + E K +N RPI+KV EAKARK R ARR++K+KKK E L E D S+
Sbjct: 680 SGEAAAAIKE---KLRALNARPIKKVREAKARKTLRTARRLEKLKKKSEGLAEDGDASER 736
Query: 533 EKARNIR 539
+KA NI+
Sbjct: 737 DKASNIQ 743
>gi|409083437|gb|EKM83794.1| hypothetical protein AGABI1DRAFT_117268 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 863
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 196/388 (50%), Gaps = 70/388 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR I ELK WK DVVLHDG+PNVG W+ DAY Q L L +LKLA L +G
Sbjct: 93 DITTPHCRNLIQGELKDWKADVVLHDGAPNVGTAWIQDAYSQSELVLMSLKLAVQFLAKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 153 GTFVTKVFRSVDYNNLIWVFSQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKLIDPKFL 212
Query: 123 DPKYAFKELGAEDGKL-------NALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHET 175
DP++ FKEL + K+ N ++ + + GY L+K + + FI+ E
Sbjct: 213 DPRHVFKELASSADKIVGNDVQANVFHPEKKRRQRD-GYNDGDYTLFKTISATDFIQGED 271
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
P L G ++ F+ Q +K + +D+
Sbjct: 272 PIAAL--------GTFNKITFETEQ--------EKEWLDLDI------------------ 297
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
TT +++ C D++VLG+ D + LL+W L +E K +
Sbjct: 298 ---------------TTEDVKANCDDLKVLGKGDFKMLLRWRLKLREEYGLDVKTK---- 338
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
+ +E V E+DEE E K ++E+ L E KR +++ ++ RTK ++M L+
Sbjct: 339 ---DTKEMVETVEVDEEMDEEQKISEELARLNTEVAARAKRARRRANEVRTKTIQRMQLQ 395
Query: 356 MLLKGDLGPTEND------DEEMFKLSQ 377
M D+G ++D E++F L +
Sbjct: 396 MTAPLDIGLEQHDASLSIGQEDVFDLGE 423
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL++++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYNFLEQARCCIDLCAAPGGWLQVASKYMPTNSVIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R ++ LK WK VLHD
Sbjct: 83 PIPHVVTF---AADITTPHCRNLIQGELKDWKADVVLHD 118
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R K+ ++ RPI+KV EAKARKK R A++++K KK + + +A D+++ EKA+ I
Sbjct: 738 VAALRAKQRALDARPIKKVAEAKARKKMRAAQQLEKAMKKADGVNDASDMTEREKAKQI 796
>gi|302698005|ref|XP_003038681.1| hypothetical protein SCHCODRAFT_64580 [Schizophyllum commune H4-8]
gi|300112378|gb|EFJ03779.1| hypothetical protein SCHCODRAFT_64580 [Schizophyllum commune H4-8]
Length = 869
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 180/366 (49%), Gaps = 46/366 (12%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR + ELK WK DVVLHDG+PNVG W+ DAY Q L L +LKLA L +G
Sbjct: 94 DITTTHCRNLLRGELKDWKADVVLHDGAPNVGTAWIQDAYTQSELVLMSLKLAVEFLVKG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ + AP +D KF
Sbjct: 154 GTFVTKVFRSTDYNNLIWVFSQLFGKVEATKPPSSRNVSAEIFVVCRDFHAPKHIDPKFL 213
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ FK+L A P+D N + + E
Sbjct: 214 DPKHVFKDLAAS-------------------IPADDKGSNSNNVQANVFQPE-------- 246
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
K R R + L ++ DL P + N + + ++
Sbjct: 247 -----KKRRKRDGYADGDYT-----LFRTATASDLIRGPDPIAILGSVNQI--TFTTDEE 294
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEE 302
+ LK T EI+ C D++VLG+ D + +LKW L ++ K +E +E
Sbjct: 295 KEWLKLEITKPEIKANCDDLKVLGKGDFKAVLKWRTTLREDLGLDNKSKE-------AQE 347
Query: 303 KVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDL 362
E+ EE E + +E+E L E KR++++ ++ +TK ++M L+M D+
Sbjct: 348 LTETVEVTEEVDEDTQIQQELERLNAEAAARTKRQRRRANEVKTKTIQRMQLQMTAPLDI 407
Query: 363 GPTEND 368
G + D
Sbjct: 408 GMEQAD 413
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA ++M +S+I + V
Sbjct: 23 QGYRARSAFKLIQLNKKYNFLETARCCIDLCAAPGGWLQVASKHMPNNSVIVAGVDLVPI 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
P V DI R +R LK WK VLHD
Sbjct: 83 KPIPRVVT--FAADITTTHCRNLLRGELKDWKADVVLHD 119
>gi|312082095|ref|XP_003143302.1| hypothetical protein LOAG_07721 [Loa loa]
gi|307761535|gb|EFO20769.1| hypothetical protein LOAG_07721 [Loa loa]
Length = 602
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 202/391 (51%), Gaps = 71/391 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +K R + +EL+ W+ D VLHDG+PN+G NWV DA+ Q CLTL ALKLA+ IL +
Sbjct: 92 DITAEKTRQMVRKELRGWEADCVLHDGAPNIGRNWVQDAFQQNCLTLSALKLATQILAKN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY L+ +F++LF++VH KP ASR ESAEIFVVC+ Y+ P KL
Sbjct: 152 GIFVTKVFRSSDYHHLISVFEKLFRQVHVWKPAASRLESAEIFVVCEKYLKPDKLSPDLL 211
Query: 123 DPKYAFKELGAE----DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F E + + +L + +++K A+GY ++ L+K + + FI+
Sbjct: 212 DPKKVFAESTQQSVTSNPQLMLQSRIKLKKVPAVGYENESISLHKIINATDFIQSSDYLE 271
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
LL +A+K I
Sbjct: 272 LLA------------SAYK----------------------------------------I 279
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
DDE L + TT E++ C +D++V G +++R +LKW + + + E+ +E +
Sbjct: 280 ALDDERWLNNEETTDEVKCCLEDVKVCGPRELRLILKWRRNIIKKINEEMARDEADNPTK 339
Query: 299 EEEEKVVEDE-MDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKML 357
+ EDE M E E++L+ T + EE ++R+ K K K S E+ K LKML
Sbjct: 340 DVMVVNPEDERMAEIEQQLL--TAKAEEKAALKKRKRKLLKDKASNEKRK-----KLKML 392
Query: 358 LKGDLGPTENDDEEMFKLSQI------RTTD 382
++GD D++E+F L ++ R+TD
Sbjct: 393 VEGDTYEIP-DEQELFSLKKLARAKGQRSTD 422
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFLQKS+ VDLCAAPGGW+QVA QNM SS+ D +K
Sbjct: 23 GYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVATQNMPVSSLCIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ V +Q DI R+ VR L+ W+ VLHD
Sbjct: 83 INRCVTLQ---GDITAEKTRQMVRKELRGWEADCVLHD 117
>gi|390604798|gb|EIN14189.1| hypothetical protein PUNSTDRAFT_129823 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 873
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 181/381 (47%), Gaps = 76/381 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I ELK WK DVVLHDG+PNVG WV DAY Q L L +LKLA L +G
Sbjct: 93 DITTPQCRNLIRSELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSLKLAVEFLMKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 153 GTFVTKVFRSADYNNLIWVFSQLFGKVEATKPPSSRNVSAEIFVVCKDFLAPKHIDPKFL 212
Query: 123 DPKYAFKELGAE----DGKLNALKKKQV-------EKSKALGYPSDVNVLYKNLPVSKFI 171
DP++ FKEL A K N+ Q ++ K GY +LYK + FI
Sbjct: 213 DPRHVFKELSASTTIAGDKGNSANNVQANVFQPEKKRRKREGYADGDYILYKVAGAADFI 272
Query: 172 EHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
+ P LL ++ + + + E+L D+ A
Sbjct: 273 RTDDPISLLGSVNKI-----------TFEKDEEKEWLTLDVTTPDVKA------------ 309
Query: 232 MMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKT----EK 287
+ DD VL G+ D + LLKW L E ++
Sbjct: 310 -------NCDDLKVL-------------------GKGDFKTLLKWRVALRQEIGLDVKQR 343
Query: 288 EKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTK 347
EE E E EE V+DE +E E+E L KR+++K ++ + +
Sbjct: 344 VTEEITEVAEIEE----VDDEQQIQE--------ELERLNAASAARTKRERRKANETKQR 391
Query: 348 LQEKMNLKMLLKGDLGPTEND 368
++M L+M D+G + D
Sbjct: 392 TIQRMQLQMTAPLDIGLEQAD 412
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYGFLESARCCIDLCAAPGGWLQVASKYMPVNSLIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R +R+ LK WK VLHD
Sbjct: 83 PIPRVVTF---ASDITTPQCRNLIRSELKDWKADVVLHD 118
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+ R K ++ RPI+KV EAK RKK R A+R++K KK + + EA D+++ EKA+ I
Sbjct: 750 IRALRAKMRALDARPIKKVAEAKGRKKLRAAQRLEKAMKKAQGVTEASDMTEREKAQQI 808
>gi|342887818|gb|EGU87247.1| hypothetical protein FOXB_02229 [Fusarium oxysporum Fo5176]
Length = 819
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 192/395 (48%), Gaps = 75/395 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ +CR + + LKTWK D VLHDG+PNVG WV D+++Q L L +LKLA+ L+ G
Sbjct: 92 DITSSECRNTLRQHLKTWKADAVLHDGAPNVGTAWVQDSFNQVELALQSLKLATEFLRAG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV+KVFRSK+Y S LW+ QLF +V +T P ASR+ KLD +
Sbjct: 152 GVFVSKVFRSKEYNSFLWVLNQLFTKVDATSPPASRQ----------------KLDPRLL 195
Query: 123 DPKYAFKELGAEDGKLNALKK---KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DPKY F E +D N K +V+K K GY +K + S+FI+ P +
Sbjct: 196 DPKYVFAEF--QDPTPNNEAKVYNPEVKKRKRDGYEEGDFTQFKEMAASEFIQTTDPIAV 253
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L G +R +FK P G + +A
Sbjct: 254 L--------GSYNRLSFK---------------------QPPNGDVALA----------- 273
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGE 299
++ K P TT EI+ CC D+RVLGRKD + LLKW + D K + E
Sbjct: 274 ----ALDKLPETTDEIRNCCSDLRVLGRKDFKILLKWRLKMRDIFQLKTPQ---AATVEE 326
Query: 300 EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLK 359
EE + MDEE +K +E++ +KD E + KR+K+K ++ + + +M L M
Sbjct: 327 SEEVAEVESMDEE----LKIQEELQNMKDRENTKRKREKRKENERKQREVVRMQLNMSTP 382
Query: 360 GDLGPTEN---DDEEMFKLSQIRTTDQLDLITASK 391
D+G E+ + MF L ++ TD + + K
Sbjct: 383 FDIGLEESGPIGEGAMFSLKKVDKTDAMRRLNRGK 417
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 17/104 (16%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KG R+RAAFKLIQLN+KF FL++SKV +DLCAAPG W+QV ++ +I+ D +K
Sbjct: 22 KGLRARAAFKLIQLNKKFGFLEQSKVVIDLCAAPGSWLQVCRETCPTGAILIGCDLDYIK 81
Query: 248 HPSTTVEIQ------ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q EC R +R LK WK VLHD
Sbjct: 82 PIPGVLSFQSDITSSEC--------RNTLRQHLKTWKADAVLHD 117
>gi|392571269|gb|EIW64441.1| FtsJ-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 997
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 189/378 (50%), Gaps = 67/378 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR + ELK WK DVVLHDG+PNVG WV DAY Q L L ++KLA+ L +G
Sbjct: 93 DITTQQCRNQLRNELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSMKLAAEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KFF
Sbjct: 153 GTFVTKVFRSADYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFF 212
Query: 123 DPKYAFKELG----AEDGKLNALKKKQV-------EKSKALGYPSDVNVLYKNLPVSKFI 171
DP++ FKEL A++ L A K QV ++ + GY LYK ++F+
Sbjct: 213 DPRHVFKELSMSVPADEQSLAAQKSAQVNVFQPEKKRRQRSGYEEGDYTLYKEAGAAEFL 272
Query: 172 EHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
L G ++ F + + E+L D+ A
Sbjct: 273 RGPDAVTFL--------GTYNKITF---TTDEEKEWLNLDITTPDVKA------------ 309
Query: 232 MMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEE 291
+ DD VL G+ D + LLKW + +E + K +
Sbjct: 310 -------NCDDLKVL-------------------GKGDFKALLKWRTAIREEIGLENKSK 343
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEK 351
+ EE E+ EE E + +E+E L E KR++++ ++ +T+ ++
Sbjct: 344 DT-------EELTEIVEVTEEVDEEEQIQQELERLNAEASARTKRERRRANEVKTRTIQR 396
Query: 352 MNLKMLLKGDLGPTENDD 369
M L+M+ D+G +NDD
Sbjct: 397 MQLRMVAPMDIGMEQNDD 414
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 17/104 (16%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S I+ D +
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWLQVASKYMPTNSVIVGVDLVPIR 82
Query: 247 KHP-----STTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P ++ + Q+C R +RN LK WK VLHD
Sbjct: 83 AIPRVVTFASDITTQQC--------RNQLRNELKDWKADVVLHD 118
>gi|448538470|ref|XP_003871503.1| Spb1 AdoMet-dependent methyltransferase [Candida orthopsilosis Co
90-125]
gi|380355860|emb|CCG25379.1| Spb1 AdoMet-dependent methyltransferase [Candida orthopsilosis]
Length = 808
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 205/402 (50%), Gaps = 65/402 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLIVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF +V +TKP +SR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFDKVEATKPPSSRNVSAEIFVVCRGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSK--ALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F+EL + N K EK + GY L+ +P+ +FI+ + P
Sbjct: 214 DPREVFEELNDKKSVNNEEKVFNPEKKRRQRQGYEEGDYTLFHTMPIMQFIKEDDPI--- 270
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+L QLN+ D+ W V K
Sbjct: 271 ---------------NQLGQLNK-----------FDIDDNDHEWKIVKK----------- 293
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
LK S + E++EC KD+++LG+K+ +++L++ K D G +
Sbjct: 294 -----LK--SYSEELRECFKDLKILGKKEFKHILRFRKQARDLL-------------GVD 333
Query: 301 EEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKG 360
+E+ + EE E K +E+ ++ ++++++ KR KK ++ + K + ++M+
Sbjct: 334 KEEEKPEIEVEELTEEQKIDQELNQMLEKQKQKTKRAKKTANELKQKEIIRNQMQMVTDM 393
Query: 361 DLG--PTENDDEEMFKLSQIRTTDQLDLITASKPE-VFADSD 399
++G + + +F L + QL + A K VF++ D
Sbjct: 394 NIGIDAAQIGADSLFNLKTAEKSGQLSKLAAGKKAMVFSEED 435
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASQLCPVNSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNCITFQSDITTEDC-------RSKLRGHMKTWKADTVLHD 119
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++N RPI+KV+EAK RKK R RR++K+KKK + + E S+ +KA I
Sbjct: 695 QLNARPIKKVLEAKGRKKMRALRRLEKLKKKSDLINEDSSKSEYDKAAEI 744
>gi|426202111|gb|EKV52034.1| AdoMet-dependent rRNA methyltransferase SPB1 [Agaricus bisporus
var. bisporus H97]
Length = 902
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 194/381 (50%), Gaps = 56/381 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR I ELK WK DVVLHDG+PNVG W+ DAY Q L L +LKLA L +G
Sbjct: 132 DITTPHCRNLIQGELKDWKADVVLHDGAPNVGTAWIQDAYSQSELVLMSLKLAVQFLAKG 191
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KF
Sbjct: 192 GTFVTKVFRSVDYNNLIWVFSQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKLIDPKFL 251
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DP++ FKEL + K+ +G NV + P K + +
Sbjct: 252 DPRHVFKELASSADKI-------------VGNDVQANVFH---PEKKRRQRD-------- 287
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
GY + L + +F+Q D AA G + ++ + + D
Sbjct: 288 ------GYND-GDYTLFKTISATDFIQGE----DPIAALGTFNKITFETEQEKEWLDLD- 335
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEE 302
TT +++ C D++VLG+ D + LL+W L +E K + + +E
Sbjct: 336 -------ITTEDVKANCDDLKVLGKGDFKMLLRWRLKLREEYGLDVKTK-------DTKE 381
Query: 303 KVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDL 362
V E+DEE E K ++E+ L E KR +++ ++ RTK ++M L+M D+
Sbjct: 382 MVETVEVDEEMDEEQKISEELARLNTEVAARAKRARRRANEVRTKTIQRMQLQMTAPLDI 441
Query: 363 GPTEND------DEEMFKLSQ 377
G ++D E++F L +
Sbjct: 442 GLEQHDAALSIGQEDVFDLGE 462
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 13/102 (12%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL++++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 62 QGYRARSAFKLIQLNKKYNFLEQARCCIDLCAAPGGWLQVASKYMPTNSVIVGVDLVPIK 121
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNL----LKWWK---VLHD 282
V DI RNL LK WK VLHD
Sbjct: 122 PIPHVVTF---AADITT---PHCRNLIQGELKDWKADVVLHD 157
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R K+ ++ RPI+KV EAKARKK R A++++K KK + + +A D+++ EKA+ I
Sbjct: 777 VAALRAKQRALDARPIKKVAEAKARKKMRAAQQLEKAMKKADGVNDASDMTEREKAKQI 835
>gi|323509097|dbj|BAJ77441.1| cgd4_1580 [Cryptosporidium parvum]
Length = 491
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 162/299 (54%), Gaps = 32/299 (10%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++CR I EL VDVVLHDG+PNVG +W DAY Q L L + +LA IL+
Sbjct: 27 DITTERCRKLIFDELNGIPVDVVLHDGAPNVGTSWDKDAYIQNELVLHSAELACEILRPN 86
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY S+LW+ QLF V +TKPQ+SR SAEIF+VC Y AP K+D++FF
Sbjct: 87 GIFVTKVFRSTDYNSVLWVLSQLFNTVKATKPQSSRNVSAEIFLVCLGYKAPKKIDSRFF 146
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALG--YPSDVNVLYKNL--PVSKFIEHETPTV 178
DPKY F+ E+ +N L LG P D +N +K I +T
Sbjct: 147 DPKYVFQSNKEENEGVNLL---------PLGDDQPMDDESGSENTEDNDNKLINRKTKKS 197
Query: 179 LLQHATEV--GKGYRSRAA------FKLIQLNRKFEFLQKSKVCVDLCAAPGGWM---QV 227
+ +E+ G G R+R F++I ++F + L + + +V
Sbjct: 198 MKSSLSELIKGIGKRNRDGYEKGDDFRMIS---AYDFFHAENPPLLLLKSNTINLNPKKV 254
Query: 228 AKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKT 285
+ N + I VL HP T EI+ C+D++VLG+K++ LLKW + VL D K
Sbjct: 255 DESNTLERDFIDL----VLNHPKTNHEIKLLCEDLKVLGKKELMQLLKWRFLVLKDIKA 309
>gi|354542880|emb|CCE39598.1| hypothetical protein CPAR2_600110 [Candida parapsilosis]
Length = 813
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 152/282 (53%), Gaps = 49/282 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG+ WV DA+ Q LTL ALKLA L G
Sbjct: 94 DITTEDCRSKLRGHMKTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLIVG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+DY +L+W+F+QLF +V +TKP +SR SAEIFVVC+ + AP KLD +
Sbjct: 154 GTFVTKIFRSRDYNNLMWVFQQLFDKVEATKPPSSRNVSAEIFVVCRGFKAPKKLDPRLL 213
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSK--ALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DP+ F+EL + N K EK + GY L+ +P+ +FI+ + P
Sbjct: 214 DPREVFEELNGKKSVNNEEKVFNPEKKRRQRQGYEEGDYTLFHTMPIMQFIKEDDPIN-- 271
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
+L QLN+ D+ W + K
Sbjct: 272 ----------------QLGQLNK-----------FDIDDNDHEWKIIKK----------- 293
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
LK S + E++EC KD+++LG+K+ +++L++ K D
Sbjct: 294 -----LK--SYSEELRECFKDLKILGKKEFKHILRFRKQARD 328
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV +DLCAAPG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAPGSWCQVASQLCPVNSLIIGVDIVPI 82
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 83 KPLPNCITFQSDITTEDC-------RSKLRGHMKTWKADTVLHD 119
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 454 EFDTDEEDGLGKLLRYWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRM 513
E+ D+E+ KL++ K ASL ++K ++N RPI+KV+EAK RKK R RR+
Sbjct: 670 EWFLDDENKHSKLIKPISKE---ASLA--IKEKLKQLNARPIKKVLEAKGRKKMRALRRL 724
Query: 514 DKMKKKLETLMEAPDVSDAEKARNI 538
+K+KKK + + E S+ +KA I
Sbjct: 725 EKLKKKSDLINEDSSKSEYDKAAEI 749
>gi|340509133|gb|EGR34695.1| hypothetical protein IMG5_003560 [Ichthyophthirius multifiliis]
Length = 778
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 163/311 (52%), Gaps = 63/311 (20%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
++DITT +C + +EL K DVVL+DG+PN+G NW DA+ Q LTL ALKLA L
Sbjct: 91 VQDITTPQCYQLLKKELNGIKADVVLNDGAPNIGSNWQKDAFSQTELTLCALKLACNFLT 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRSKDY +L+W+ K+ F+ + + KP+ASR +SAEIF+VC +IAP +D K
Sbjct: 151 KGGIFVTKVFRSKDYNALVWVCKKFFKTIEANKPKASRFQSAEIFLVCSDFIAPDFIDDK 210
Query: 121 FFDPKYAFKELGAEDG--------KLNALKKKQVEKSKALGYPSDV-NVLYKNLPVSKFI 171
F+ KY FK+ ED ++N++ K ++ K +GY DV +++ +P ++F+
Sbjct: 211 LFEIKYIFKD--TEDDYYTNQVQHEVNSIDKIMQKRRKRVGYADDVKQTVFQAIPFAEFV 268
Query: 172 EHETP-TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
P V L H I N Q K +++ P W
Sbjct: 269 NVNNPFAVFLTHNA--------------ISFNT-----QVDKNLLNVAQGPEDW------ 303
Query: 231 NMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWW-KVLHDEKTEKEK 289
+E C+DI VLG++D+ L+KW K+ H +K ++++
Sbjct: 304 -------------------------KELCEDILVLGKRDIAKLIKWRNKIQHSQKKQRQQ 338
Query: 290 EEEKEGGEGEE 300
+ G + EE
Sbjct: 339 LKATSGKQNEE 349
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
GYRSRA FKLIQ+N+K+ FL+K+ +DLCAAPGGW+QV +
Sbjct: 24 GYRSRACFKLIQINKKYSFLEKANAVIDLCAAPGGWLQVVQ 64
>gi|298709155|emb|CBJ31099.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1004
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 151/283 (53%), Gaps = 58/283 (20%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITTD+CR A+ RE++TWK DVVL DG+PNVG + DAY Q + L AL++A+ LK
Sbjct: 88 VHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAYKKDAYEQNEIALHALRVATQHLK 147
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKV+RS+DY SL+W+ +Q F+ + KP +SR +SAEIFVV ++Y AP +D++
Sbjct: 148 KGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASSRSQSAEIFVVGRNYKAPDFIDSR 207
Query: 121 FFDPKYAFKE----LGAEDGKLNALKKK--QVEKSKALGYPSDVNV-LYKNLPVSKFIEH 173
+PK+AF++ G + G L+ KK Q K GY D+ + L + VS F+
Sbjct: 208 MLEPKHAFRQDYDVEGGQKG-LSIFHKKYDQHNKRHRQGYADDLGMSLSRVAKVSDFVNA 266
Query: 174 ETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
E P +L T V EF +V D
Sbjct: 267 EDPVRVLTD-THV------------------LEFGADCQVFKD----------------- 290
Query: 234 ASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
H +TT EIQ C D+RVLG+ D R+L+KW
Sbjct: 291 --------------HRATTAEIQHLCSDLRVLGKGDFRHLIKW 319
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 44/51 (86%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+R+R+AFKLI++N+K++FL +KVC+DLCAAPGGW QVA ++M SII
Sbjct: 20 QGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRGSII 70
>gi|405118494|gb|AFR93268.1| RNA methyltransferase [Cryptococcus neoformans var. grubii H99]
Length = 908
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 203/385 (52%), Gaps = 42/385 (10%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITT CR + + + WK D+VLHDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 91 VSDITTAHCRQTLRQHMHDWKADLVLHDGAPNVGSAWVQDAFTQNELVLQSLKLATEFLA 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLLW+F QLF+ V +TKP +SR SAEIFVVC+ +IAP +D K
Sbjct: 151 KGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPPSSRNVSAEIFVVCRDFIAPKHIDPK 210
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIE--HETPTV 178
F DPK+ FK+ + +L E + A P+ + ++ H V
Sbjct: 211 FLDPKHVFKD-------IASLPTSITEPTDASIVPTSSSTASAAAAAARLAANSHAHSNV 263
Query: 179 LLQHATEVGKGYRSRAA---FKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
+A E + +R A + L EF++ + L NM
Sbjct: 264 ---YAPEKKRRHREGYAEGDYTLYHTASAEEFVRGQDPVLLLG------------NMNKI 308
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
+++ LK TT ++ +D++VLG+ D + L+KW + E K ++ +
Sbjct: 309 EFRTETEKAWLKSRHTTPDVIANFEDLKVLGKGDFKALMKWRLAIRLEIGLDVKADKTQ- 367
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
+ E+VV + MDEEE + T+E+++L+ + + K+++K+ ++++ + K+ L
Sbjct: 368 ---DATEEVVVEPMDEEE----QITEELQKLQQAKLAKTKKERKRANEKKARDLLKLQLN 420
Query: 356 MLLKGDLGPTEND-----DEEMFKL 375
M + DL +ND +EE+F L
Sbjct: 421 MTVPDDL--DQNDLALQGEEEIFDL 443
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKL+ LNRK++ L KS+ C+DLCAAPGGW+QVA++ M S II D ++
Sbjct: 23 QGYRARSAFKLVHLNRKYDLLSKSRCCIDLCAAPGGWLQVAEKYMPKGSLIIGVDLNAIK 82
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P T + + R+ +R + WK VLHD
Sbjct: 83 PLPHVTTFVSDITT---AHCRQTLRQHMHDWKADLVLHD 118
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V+ R ++ ++ RPI+KV EAK RKK + RM+K KKK + +ME+ ++ D EKAR +R
Sbjct: 785 VDALRARQRALDARPIKKVAEAKGRKKMKAVARMEKAKKKADGVMESEEMGDGEKARQVR 844
>gi|308812406|ref|XP_003083510.1| Putative SAM-dependent rRNA methyltransferase SPB1 (ISS)
[Ostreococcus tauri]
gi|116055391|emb|CAL58059.1| Putative SAM-dependent rRNA methyltransferase SPB1 (ISS)
[Ostreococcus tauri]
Length = 948
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 221/437 (50%), Gaps = 63/437 (14%)
Query: 1 MEDITTDKCRIAITREL-KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
+EDITT CR A+ R K + DVV+HDG+PNVG N+ ++Y Q LTL +L+LA+ L
Sbjct: 89 VEDITTQSCRAALRRATPKGTQYDVVIHDGAPNVGGNFAKESYTQAALTLDSLRLATEFL 148
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+GGWFVTKVFRS +Y +LL+ +QLF++V STKP ASR SAEI+VVC Y+AP K+D
Sbjct: 149 GQGGWFVTKVFRSVEYHALLYACRQLFKKVESTKPVASRGTSAEIYVVCSGYLAPTKIDP 208
Query: 120 KFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+ D K+ F E E ++ K + +++++ GY V+ LYK +FI + P +
Sbjct: 209 RLLDAKHLFAEYEDEAKAVDVTKDGKRKRNRS-GYEDGVSTLYKECTAEEFIVQDKPGEM 267
Query: 180 LQ-HATEVGKG------------YRSRAAFKLIQLNRKFEFLQKS-----KVCVDLCAAP 221
L + T + G Y R + +++ F +S ++C+
Sbjct: 268 LGLYHTFILDGEVRARLRPQFFLYPCRETRQPVRITAHSLFEGRSEPLLKRICLSRKGLE 327
Query: 222 G----GWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWW 277
GWM + HP+TT EI+ D+ VLG+ D + LLKW
Sbjct: 328 PPEEVGWMNLD------------------SHPATTDEIRSLVSDLGVLGKADFKLLLKWR 369
Query: 278 KVLHDEKTEKEKEEEK--------EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKD- 328
+ E ++K + EE+ + + DEE +L+ E+ ELK
Sbjct: 370 TQIRKETGLEKKLRRRGEDEESDSSDESSGGEEEAGDSDDDEENDQLL---NEMGELKAS 426
Query: 329 -EERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLI 387
E +R ++K+K K + +L+ L + D+ ++F L++I+T LD++
Sbjct: 427 MEAQRRREKKRKAKIKAKERLRVARGLASTAR-----RSRDEMDLFSLARIKTKKDLDVV 481
Query: 388 T-ASKPEVFA--DSDEE 401
+ A P + A DSDEE
Sbjct: 482 SKAPTPGIDAARDSDEE 498
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 46/51 (90%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+RSRAAFKL+QLNRK++FL K++ C+DLCAAPGGW+QVA++ M +S+I
Sbjct: 21 QGFRSRAAFKLVQLNRKYDFLSKARACMDLCAAPGGWLQVAQKYMPMNSLI 71
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A+ + E + + +N RPI+KV EAK RKKKR ++ + + + +++ D+ D KA+
Sbjct: 803 AADMAEAKAQLAAVNTRPIKKVAEAKWRKKKRAEAKISQARVRAAAIVDQEDLPDVSKAK 862
Query: 537 NI 538
I
Sbjct: 863 EI 864
>gi|344300277|gb|EGW30617.1| hypothetical protein SPAPADRAFT_157880 [Spathaspora passalidarum
NRRL Y-27907]
Length = 807
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 151/280 (53%), Gaps = 54/280 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + LKT+KVD V+HDG+PNVG+ WV DA+ Q LTL AL+LA L
Sbjct: 94 DITTEDCRSKLRGYLKTFKVDTVMHDGAPNVGLGWVQDAFTQSQLTLQALRLAVEHLAPN 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TK+FRS+DY +LLW+F+QLF++V +TKP ASR SAEIFVVC+ + AP KLD +
Sbjct: 154 GNFITKIFRSRDYNNLLWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLL 213
Query: 123 DPKYAFKEL----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
DPK F+E+ + K+ +KK ++ GY LY +P+ +FI+ E P
Sbjct: 214 DPKEVFEEIDRVETNNEAKVFNPEKKTRHRT---GYEEGDYTLYHTMPILEFIKDEDP-- 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+ QL R L K +V D W V+K
Sbjct: 269 -------------------INQLGR----LNKLEVPTD----DHEWKVVSKLR------- 294
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK 278
S T E+ EC KD++ LGRK+ + +LK+ K
Sbjct: 295 -----------SCTPELLECLKDLKTLGRKEFKLILKFRK 323
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N KF FL+KSKV VDLC APG W QVA Q +S+I D +
Sbjct: 23 KGYRARSSFKIIQINEKFGHFLEKSKVVVDLCCAPGSWCQVASQLCPVNSLIVGVDIVPI 82
Query: 247 KHPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
K + Q DI R +R LK +K V+HD
Sbjct: 83 KPMPNVITFQS---DITTEDCRSKLRGYLKTFKVDTVMHD 119
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 458 DEEDGLGKLLRYWEKSYNAASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMK 517
D+E+ KL++ K AA + E +K ++N RPI+KV+EA+ RKK R RR++K+K
Sbjct: 669 DDENKHSKLIKPITKE--AAMAIKEKQK---QLNARPIKKVLEAQGRKKMRALRRLEKLK 723
Query: 518 KKLETLMEAPDVSDAEKARNI 538
KK + + E S+ +KA I
Sbjct: 724 KKSDLINEDSGKSERDKAEEI 744
>gi|453087445|gb|EMF15486.1| FtsJ-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 801
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 140/279 (50%), Gaps = 53/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I LKTWK D V+HDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 92 DITTDKCRATIRGHLKTWKADTVIHDGAPNVGTAWVQDAFSQNELVLSSLKLATEFLAPN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKD L WIFKQLF +V TKP +SR SAE F VCQ Y AP LD KF
Sbjct: 152 GNFVTKVFRSKDSAKLEWIFKQLFSKVEQTKPPSSRNVSAETFYVCQGYKAPKHLDPKFL 211
Query: 123 DPKYAFKEL-----GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DP YAF ++ AE N KKK+ K GY + +F++ + P
Sbjct: 212 DPHYAFMDVKEKSESAEAKVFNPEKKKR----KREGYEEGDWTQFHEAAAYEFVQSQDPI 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L LNR F + + V A +MM+
Sbjct: 268 EMLG------------------TLNR-IHFRRDGEDSVAQAAL----------DMMS--- 295
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
TT ++++ C+D++VLGR D + LL+W
Sbjct: 296 ------------ETTKDVRKNCEDLKVLGRADFKLLLRW 322
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYRSRAAFKLIQLN+K+ FLQKSK +DLCAAPGGW+QVA + M S+I D S +K
Sbjct: 22 KGYRSRAAFKLIQLNKKYGFLQKSKCLIDLCAAPGGWLQVAAEIMPQKSLIVGVDLSPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
T+ Q + R +R LK WK V+HD
Sbjct: 82 AIPKTITFQSDITTDKC--RATIRGHLKTWKADTVIHD 117
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 476 AASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKA 535
AA+ + E K +N RPI+KV EAKARK R ARR++K+KKK E L E + ++ +KA
Sbjct: 679 AAAAIKE---KMRAVNARPIKKVREAKARKTLRAARRLEKLKKKSEGLAEDGEGTERDKA 735
Query: 536 RNI 538
I
Sbjct: 736 NQI 738
>gi|409051734|gb|EKM61210.1| hypothetical protein PHACADRAFT_156427 [Phanerochaete carnosa
HHB-10118-sp]
Length = 864
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 118/194 (60%), Gaps = 11/194 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I ELK WK DVVLHDG+PNVG WV DAY Q L L ++KLA L +G
Sbjct: 93 DITTPQCRNLIRGELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSMKLAVEFLMKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KFF
Sbjct: 153 GTFVTKVFRSADYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFF 212
Query: 123 DPKYAFKEL----------GAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIE 172
DPK+ FK+L A + + N + ++ ++ K GY L+K + FI
Sbjct: 213 DPKHVFKDLSASASVEGEKAASNAQANVFQPEK-KRRKRDGYDDGDYTLFKKASAADFIR 271
Query: 173 HETPTVLLQHATEV 186
E L ++
Sbjct: 272 CEDSISFLGSVNKI 285
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +++I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLENARCCIDLCAAPGGWLQVASKYMPVNTVIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
V C R +R LK WK VLHD
Sbjct: 83 PIPRVVTF--ACDITTPQCRNLIRGELKDWKADVVLHD 118
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 251 TTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMD 310
TT +++E CKD++VLG+ D + L+KW L +E + + + EE E+
Sbjct: 301 TTEDVEENCKDLKVLGKGDFKTLMKWRTALREEIGLEVRTKPT-------EELTEMVEVT 353
Query: 311 EEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTEND-- 368
EE E + +E+E L E KR++++ ++ +T+ ++M L+M D+G ND
Sbjct: 354 EEVDEETQIQEELERLNTEAVARAKRERRRANEVKTRTIQRMQLQMTAPMDIGMEHNDLS 413
Query: 369 ---DEEMFKL 375
E++F L
Sbjct: 414 LRGQEDIFDL 423
>gi|449551052|gb|EMD42016.1| hypothetical protein CERSUDRAFT_147510 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 120/195 (61%), Gaps = 10/195 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR I ELK WK DVVLHDG+PNVG WV DAY Q L L ++KLA L +G
Sbjct: 93 DITTTQCRNLIRGELKDWKADVVLHDGAPNVGTAWVQDAYSQSELVLMSMKLAVEFLIKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY +L+W+F QLF +V +TKP +SR SAEIFVVC+ ++AP +D KFF
Sbjct: 153 GTFVTKVFRSVDYNNLIWVFNQLFGKVEATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFF 212
Query: 123 DPKYAFKELGAE--DGKLNALKKK------QVEKSKAL--GYPSDVNVLYKNLPVSKFIE 172
DPK+ FK++ A +G+++ KK Q EK + GY +L+K +F+
Sbjct: 213 DPKHVFKDMSASAPEGEMSISAKKVQANVFQPEKKRRHRDGYEEGDYILFKKATAGEFVR 272
Query: 173 HETPTVLLQHATEVG 187
L ++
Sbjct: 273 GHDAVAFLGSVNKIA 287
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQLN+K+ FL+ ++ C+DLCAAPGGW+QVA + M +S+I D +K
Sbjct: 23 QGYRARSAFKLIQLNKKYSFLENARCCIDLCAAPGGWLQVATKYMPLNSVIVGVDLVPIK 82
Query: 248 HPSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
V DI R +R LK WK VLHD
Sbjct: 83 PIPRVVTF---ASDITTTQCRNLIRGELKDWKADVVLHD 118
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 251 TTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMD 310
TT ++ C+D++VLG+ D + L+KW L +E + + + E EE V +++D
Sbjct: 302 TTPDVVTNCEDLKVLGKGDFKTLMKWRTALREELG---IDVKTKETEELTEEVEVTEDVD 358
Query: 311 EEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTEND-- 368
EE + KE+E L E KR++++ ++ +T+ ++M L+M D+G ++D
Sbjct: 359 PEE----EIQKELERLNAEAAARTKRERRRANEVKTRTIQRMQLQMTAPMDIGMEQHDAS 414
Query: 369 ---DEEMFKL 375
++MF+L
Sbjct: 415 LGGQDDMFEL 424
>gi|159115593|ref|XP_001708019.1| FtsJ cell division protein, putative [Giardia lamblia ATCC 50803]
gi|157436128|gb|EDO80345.1| FtsJ cell division protein, putative [Giardia lamblia ATCC 50803]
Length = 1084
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 190/389 (48%), Gaps = 67/389 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR A+T +LK W VD V+HDG+PN+G W DA+ Q L L A KLA+ L+
Sbjct: 93 DITTAACRNALTEKLKGWAVDTVIHDGAPNMGTAWGVDAFGQNTLVLAACKLATEFLRMH 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TK+FRS D+ +LL++ +QLF++V TKP+ASR S+E F VC Y P ++D +FF
Sbjct: 153 GTFITKIFRSADHDALLYVLRQLFEKVEITKPRASRDNSSECFAVCLRYKNPKEIDGRFF 212
Query: 123 DPKYAFKELGA------EDGKLNALKKKQVEKSKAL---------------GYPSD-VNV 160
DP + FK ++ NA + + S +L GY +
Sbjct: 213 DPNHVFKNYTGIQQQSDKESMYNAALRSSSKTSSSLKQLAEDLSHTARHRTGYSDERGGG 272
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
LY +PV F+ H +P LL Y + K ++ N KF+ L
Sbjct: 273 LYMQIPVLDFLMHPSPITLLAK-------YSVISFDKDVKGNPKFQHL------------ 313
Query: 221 PGGWMQVAKQNMMASSIIHFD-------------DESVLKHPSTTVEIQECCKDIRVLGR 267
+ + + + I F+ V+ H +TT EI+ CC+D+R +
Sbjct: 314 ---YGDIKRGEQVKDPSIKFNHRVVDTWDEYTRLQHEVMAHVATTDEIKYCCQDVRNMNN 370
Query: 268 KDVRNLLKWWK--VLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMD-------EEEKELMK 318
KD R LLKW + + H + E K E+ E + D E++ L +
Sbjct: 371 KDFRKLLKWREKVIAHICEITVPVEIPKSAPTLEQLEALPAYSSDEFLQLTPEQQAHLQE 430
Query: 319 ATKEIEELKDEERRELKRKKKKVSKERTK 347
+ E+L+ +ERREL+R ++K++K++ +
Sbjct: 431 QYLQREKLR-KERRELQRAERKMAKDQAR 458
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAA+KLIQL+ ++ FL +K +DLCAAPG W QVA M S+I D +K
Sbjct: 24 GYRSRAAYKLIQLDAQYGFLSSTKCLIDLCAAPGSWSQVAAMKMPVGSLIVSVDLDPIKP 83
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ V C DI R + LK W V+HD
Sbjct: 84 INGVVSF---CSDITTAACRNALTEKLKGWAVDTVIHD 118
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 482 EYRKKRVE-INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEK 534
+ ++ RVE +N RPI+KV EA ARK+ R R+ ++ K +TL D+S+ EK
Sbjct: 940 QLQRARVEALNARPIKKVREALARKRMRAYSRLKQLTTKADTLAARTDISEREK 993
>gi|308159656|gb|EFO62181.1| FtsJ cell division protein, putative [Giardia lamblia P15]
Length = 1084
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 186/389 (47%), Gaps = 67/389 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR A+T +LK W VD V+HDG+PN+G W DA+ Q L L A KLA+ L+
Sbjct: 93 DITTAACRNALTEKLKGWAVDTVIHDGAPNMGTAWGVDAFGQNTLVLAACKLATEFLRMH 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TK+FRS D+ +LL++ +QLF++V TKP+ASR S+E F VC Y P ++D + F
Sbjct: 153 GTFITKIFRSADHDALLYVLRQLFEKVEITKPRASRDNSSECFAVCLRYKNPKEIDGRLF 212
Query: 123 DPKYAFKELGA----------------EDGKLNALKKKQVE-----KSKALGYPSD-VNV 160
DP + FK K N+ K+ E GY +
Sbjct: 213 DPNHVFKNYTGIQQQFDKESMYNTALRSSNKTNSSLKQLAEDLSHTTRHRTGYSEERGGG 272
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
LY +PV F+ H +P LL Y + K ++ N KF+ L
Sbjct: 273 LYMQIPVLDFLMHPSPIALLAK-------YSVISFDKGVKGNPKFQHL------------ 313
Query: 221 PGGWMQVAKQNMMASSIIHFD-------------DESVLKHPSTTVEIQECCKDIRVLGR 267
+ + K M I F+ V+ H +TT EI+ CC+DIR +
Sbjct: 314 ---YGDIKKGEQMKDPNIKFNHRVVDNWDEYTRLQHEVMAHVATTDEIKYCCQDIRNMNN 370
Query: 268 KDVRNLLKWWK--VLHDEKTEKEKEEEKEGGEGEEEEKV---VEDEM----DEEEKELMK 318
KD R LLKW + + H + E K E+ E + DE E++ L +
Sbjct: 371 KDFRKLLKWREKVIAHICEITVPVEMPKSAPTLEQLEALPAYTSDEFLQLTPEQQAHLQE 430
Query: 319 ATKEIEELKDEERRELKRKKKKVSKERTK 347
+ E+L+ +ERR+L+R ++K++K + +
Sbjct: 431 QYLQREKLR-KERRDLQRAERKMAKAQAR 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAA+KLIQL+ ++ FL +K +DLCAAPG W QVA M S+I D +K
Sbjct: 24 GYRSRAAYKLIQLDAQYGFLSSTKCLIDLCAAPGSWSQVAAMKMPVGSLIVSVDLDPIKP 83
Query: 249 PSTTVEIQECCKDIRVLG-RKDVRNLLKWWK---VLHD 282
+ V C DI R + LK W V+HD
Sbjct: 84 INGVVSF---CSDITTAACRNALTEKLKGWAVDTVIHD 118
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 482 EYRKKRVE-INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEK 534
+ +K RVE +N RPI+KV EA ARK+ R R+ ++ K +TL D+S+ EK
Sbjct: 940 QLQKARVEALNARPIKKVREALARKRMRAYSRLKQLTTKADTLAARTDISEREK 993
>gi|50304545|ref|XP_452227.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|73621940|sp|Q6CV12.1|SPB1_KLULA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49641360|emb|CAH01078.1| KLLA0C00737p [Kluyveromyces lactis]
Length = 833
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 9/183 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+ CR + +KTWK D VLHDG+PNVG++W DA+ Q LTL ALKLA L G
Sbjct: 95 DITTEDCRSKLRGYMKTWKADTVLHDGAPNVGLSWAQDAFTQSHLTLQALKLAVENLVVG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY L+W+F+QLF++V +TKP ASR SAEIFVVC+++ AP KLD +
Sbjct: 155 GTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKNFKAPKKLDPRLL 214
Query: 123 DPKYAFKELGAEDGKLNALKK-----KQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
DPK F+EL DG N K K+V K GY +LY + F++ E P
Sbjct: 215 DPKEVFEEL--PDGPQNMEAKVFNPEKKVRKRG--GYEEGDYLLYHETGLMDFMKSEDPI 270
Query: 178 VLL 180
+L
Sbjct: 271 TML 273
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 16/104 (15%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FK+IQ+N K+ FL+KSKV +DLCAAPG W QVA +S+I D +
Sbjct: 24 KGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASNLCPVNSLIIGVDIVPM 83
Query: 247 KHPSTTVEIQ-----ECCKDIRVLGRKDVRNLLKWWK---VLHD 282
K + Q E C R +R +K WK VLHD
Sbjct: 84 KTMPNVITFQSDITTEDC-------RSKLRGYMKTWKADTVLHD 120
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+N RPI+KV EAKARKK R R++K+KKK + + D S+ +KA I
Sbjct: 721 LNARPIKKVAEAKARKKHRAVARLEKLKKKAGLINDDSDKSEKDKAEEI 769
>gi|291228520|ref|XP_002734226.1| PREDICTED: Putative rRNA methyltransferase 3-like [Saccoglossus
kowalevskii]
Length = 261
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 97/122 (79%), Gaps = 1/122 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+KCR + ELK WK D+VL+DG+PNVG NW++DA+ Q LTL ALKLAS L +G
Sbjct: 92 DITTEKCRSLLRNELKDWKADIVLNDGAPNVGKNWLHDAFTQASLTLKALKLASDFLTQG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRSKDY L+W+FKQLF++VH+TKP ASR ESAEIFVVCQ YIAP K+ F
Sbjct: 152 GWFVTKVFRSKDYQPLMWVFKQLFKKVHATKPPASRSESAEIFVVCQGYIAPDKIGM-FI 210
Query: 123 DP 124
P
Sbjct: 211 TP 212
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR+R+AFKL+QLNRKF+FLQKS+V +DLCAAPGGW+QVA +M SS+I D ++
Sbjct: 23 GYRARSAFKLLQLNRKFQFLQKSRVLIDLCAAPGGWLQVASNHMPVSSLIVGVDLVPIRP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
T+ +Q DI R +RN LK WK VL+D
Sbjct: 83 IPNTITVQA---DITTEKCRSLLRNELKDWKADIVLND 117
>gi|156089279|ref|XP_001612046.1| ribosomal RNA large subunit methyltransferase J family protein
[Babesia bovis]
gi|154799300|gb|EDO08478.1| ribosomal RNA large subunit methyltransferase J family protein
[Babesia bovis]
Length = 959
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/481 (30%), Positives = 220/481 (45%), Gaps = 95/481 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI T +CR I ++L+ +VDVVLHDG+PNVG NW DA++Q L + A KLAS +L++G
Sbjct: 92 DIRTQRCRNLINQQLRGAEVDVVLHDGAPNVGANWNLDAFNQNVLVIEAAKLASNVLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS DY SL+W + F RV TKP +SR SAEIF VC + LD K F
Sbjct: 152 GIFVTKIFRSADYNSLIWTLGKCFDRVKVTKPSSSRNVSAEIFAVCIGFRTLKSLDPKIF 211
Query: 123 DPKYAFKELGA-------EDGKLNALKK--KQVEKSKALGYPSDVNVLYKNLPVSKFIEH 173
+ + F G E K ++L + +QV+K GY + ++ + +F+
Sbjct: 212 NCENVFISQGGAPADEPEESTKPSSLSELLRQVKKVNKEGYEEGDD--FREYSIIEFLTS 269
Query: 174 ETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
P +L + + R K ++ + E LQK
Sbjct: 270 SNPAEMLVSSNR----FVFRLGSKASGIDNEAELLQK----------------------- 302
Query: 234 ASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK 293
V H TT EI+ C D++V GR D++ LLKW + LH E K E+
Sbjct: 303 -----------VESHSLTTEEIRLLCSDLKVAGRSDLQRLLKWRQKLHKEFFPVSKPEK- 350
Query: 294 EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
+ V + D E +E ++I L D R++L+R ER + +E M
Sbjct: 351 -----HVVDTVTPVDADAEPEEEALNREQIAAL-DRVRKDLRR------TERKQRREMMK 398
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYN 413
K L G + + D E+F+LS +R D +++ D D E +
Sbjct: 399 HKKALAGSASISIDADPELFRLSTLRGHDIDEIL---------DEDNE-----------S 438
Query: 414 VEKSELDDSGLY--------YKNPDDSDLEFESSSEDENDVEKKLVEEEFDTDEEDGLGK 465
S+ D LY Y + D +L+FE+ ED+ ++ + E D + + + K
Sbjct: 439 DSSSKAGDDFLYAGNDNASDYSDTDSMELQFETDDEDD-----RVAQMEVDLEVQHEMSK 493
Query: 466 L 466
L
Sbjct: 494 L 494
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFK+IQL +KF + V VDLCAAPGGW+QVA +++ SSII D ++
Sbjct: 22 QGYRARSAFKIIQLAKKFNIFENCNVLVDLCAAPGGWLQVASKHLPVSSIIIGVDLVPIR 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWW-------KVLHD 282
V IQ DIR + RNL+ VLHD
Sbjct: 82 PIKGVVTIQ---ADIRT---QRCRNLINQQLRGAEVDVVLHD 117
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+ YR K E+ RPIRKV+EA+ R+K R R++ + ++E L + D A+ A+ +
Sbjct: 703 LMKRYRAKLYELKNRPIRKVLEARGRRKMRVQRKLKSVLPRVEALQNS-DTGSAKTAKKL 761
>gi|385305187|gb|EIF49177.1| et-dependent methyltransferase involved in rrna processing and 60s
ribosomal subunit maturation [Dekkera bruxellensis
AWRI1499]
Length = 305
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 97/129 (75%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTD CR + LKTWKVD VLHDG+PNVG+NW+ DAY Q LTL AL+LA L G
Sbjct: 94 DITTDDCRSKLRGYLKTWKVDTVLHDGAPNVGLNWIQDAYGQSRLTLEALRLAVEHLTPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY +L+W+FKQLF V +TKP ASR SAEIFVVC+ + AP KLD KF
Sbjct: 154 GTFVTKVFRSRDYNNLIWVFKQLFDHVEATKPPASRNVSAEIFVVCKRFKAPKKLDPKFL 213
Query: 123 DPKYAFKEL 131
DPK F+EL
Sbjct: 214 DPKAVFEEL 222
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 188 KGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
KGYR+R++FKL+Q+N K+ FL+KSKV VDLCAAPG W QVA + +S+I D +
Sbjct: 23 KGYRARSSFKLLQINEKYGHFLEKSKVVVDLCAAPGSWCQVASELCPVNSLIVGVDIVQM 82
Query: 247 KHPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
K + Q DI R +R LK WK VLHD
Sbjct: 83 KPLPKCITFQS---DITTDDCRSKLRGYLKTWKVDTVLHD 119
>gi|403223589|dbj|BAM41719.1| FtsJ cell division protein [Theileria orientalis strain Shintoku]
Length = 813
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 188/359 (52%), Gaps = 65/359 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI T KCR I +LK +VDVVLHDGSPN+G NW DA++Q L L A KLAS ILK+G
Sbjct: 92 DIRTPKCRSLIVSQLKGGEVDVVLHDGSPNMGSNWNLDAFNQNVLVLSAAKLASTILKKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS DY SL+W+ F+R+ TKPQ+SR SAEIF +C + + LD + F
Sbjct: 152 GIFVTKIFRSSDYNSLIWMLGNCFERIKVTKPQSSRNVSAEIFAICIGFKSLKGLDPRLF 211
Query: 123 DPKYAF------KELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETP 176
+ Y F K + LN L K+Q ++++ GY + Y + V +F+ TP
Sbjct: 212 NVDYVFHSDRDSKTPEITNKSLNQLFKEQKKRNRE-GYDESI---YSEITVLEFMRSNTP 267
Query: 177 TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
LL N K F +AP +
Sbjct: 268 ANLLFS-------------------NNKITF-----------SAP------------KHT 285
Query: 237 IIHFDDESVLKH----PSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHD----EKTEK 287
DD+ ++K P TT E++ C D++V G+ D+++LLKW +K+L +K++
Sbjct: 286 DSREDDQKLVKQIEEDPLTTEEVKLLCSDLKVAGKSDLQSLLKWRFKLLKALPIVDKSKA 345
Query: 288 EKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERT 346
EK E + E+ E +E+E D++ K+ +K E+ + + +ER+ LKR +K SKE T
Sbjct: 346 EKSEVEPKNIAEDAELNIEEE-DKKIKDRIKL--ELRKAQRKERKLLKRTRKG-SKEAT 400
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSR+AFK+IQL++KF Q VDLCAAPGGW+QVA +++ SS I
Sbjct: 23 GYRSRSAFKIIQLSKKFNIFQNCNTLVDLCAAPGGWLQVASKHLPVSSTI 72
>gi|58263807|ref|XP_569180.1| RNA methyltransferase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108256|ref|XP_777079.1| hypothetical protein CNBB3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819491|sp|P0CS79.1|SPB1_CRYNB RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|338819492|sp|P0CS78.1|SPB1_CRYNJ RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|50259764|gb|EAL22432.1| hypothetical protein CNBB3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223830|gb|AAW41873.1| RNA methyltransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 908
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 200/417 (47%), Gaps = 102/417 (24%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITT CR + + + WK D+VLHDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 91 VADITTPHCRQTLRQHMHDWKADLVLHDGAPNVGSAWVQDAFTQNELVLQSLKLATEFLA 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLLW+F QLF+ V +TKP +SR SAEIFVVC+ +IAP +D K
Sbjct: 151 KGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPPSSRNVSAEIFVVCRDFIAPKHIDPK 210
Query: 121 FFDPKYAFKELGA-----------------------------------EDGKLNALKKKQ 145
F DPK+ FK++ + + A +KK+
Sbjct: 211 FLDPKHVFKDIASLPTSITEPTDTSIAPTSSSTASAAAAAARLAANSHAHSNVYAPEKKR 270
Query: 146 VEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKF 205
+ GY L+ +F+ + P +LL + K
Sbjct: 271 RHRE---GYAEGDYTLHHTASAEEFVRGQDPVLLLGNMN-------------------KI 308
Query: 206 EFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVL 265
EF +++ GW++ ++ I +F+D VL
Sbjct: 309 EFRNETE---------KGWLK--SRHTTPDIIANFEDLKVL------------------- 338
Query: 266 GRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEE 325
G+ D + L+KW + E K ++ + + E+VV + MDEEE + T+E+++
Sbjct: 339 GKGDFKALMKWRLAIRLEIGLDVKADKTQ----DATEEVVVEPMDEEE----QITEELQK 390
Query: 326 LKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTEND-----DEEMFKLSQ 377
L+ + + KR++K+ ++++ + K+ L M + DL +ND +EE+F L +
Sbjct: 391 LQQAKLAKTKRERKRANEKKARELLKLQLNMTVPDDL--DQNDLALQGEEEIFDLEE 445
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKL+ LNRK++ L K++ C+DLCAAPGGW+QVA++ M S II D ++
Sbjct: 23 QGYRARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEKYMPKGSLIIGVDLNAIK 82
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P T + + R+ +R + WK VLHD
Sbjct: 83 PLPHVTTFVADITTP---HCRQTLRQHMHDWKADLVLHD 118
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V+ R ++ ++ RPI+KV EAK RKK + RM+K KKK + +ME+ ++ D EKAR +R
Sbjct: 785 VDALRARQRALDARPIKKVAEAKGRKKMKAVARMEKAKKKADGVMESEEMGDGEKARQVR 844
>gi|168007294|ref|XP_001756343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692382|gb|EDQ78739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 844
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 142/278 (51%), Gaps = 53/278 (19%)
Query: 2 EDITTDKCRIAITRELKTWK---VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT +CR AI + LK K V VVLHDGSPNVG W ++ Q L L +LKLA+ +
Sbjct: 91 EDITTPQCRAAIKKVLKEKKHDMVQVVLHDGSPNVGGAWSSESSAQTALVLDSLKLATDV 150
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L GG FVTK+FRS+DY +LL+ FKQLF++V TKP ASR SAEI+V+CQ Y APAK+D
Sbjct: 151 LCPGGTFVTKIFRSQDYNALLFAFKQLFEKVEVTKPIASRATSAEIYVICQKYRAPAKID 210
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ FKE E K+ + K +K GY VL K + S F+ E P
Sbjct: 211 PRLLDAKHLFKET-IEAPKVIDVMKASKQKRHREGYEEGTTVLRKEVKASDFVWSEKPLD 269
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T + S
Sbjct: 270 MLGSITSM-------------------------------------------------SFK 280
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
D + + +H TT EI+ C+D+RVLG+ + + LLKW
Sbjct: 281 DPDCKVIKEHDLTTDEIKILCEDLRVLGKTEFKQLLKW 318
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRA+FKL+QL+RKF+FL ++ +DLCAAPGGWMQV +NM S+I D ++
Sbjct: 22 QGFRSRASFKLVQLDRKFQFLSSARSVLDLCAAPGGWMQVCSKNMPVGSLIIGIDLVPIR 81
Query: 248 HPSTTVEIQE 257
V +QE
Sbjct: 82 PIRGCVTLQE 91
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EIN RP++KV EAKARKK+R +++++ ++K + + D+S+ K +++
Sbjct: 707 EINARPVKKVAEAKARKKRRVLKKLEQARQKATAIADQEDISNKSKQKSM 756
>gi|294891100|ref|XP_002773420.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239878573|gb|EER05236.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 419
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 191/378 (50%), Gaps = 75/378 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT KCR + +EL DVVL+DG+PNVG +W DAY+Q L L A+ LA+ +L++G
Sbjct: 92 DITTQKCRQFLLKELNGTPCDVVLNDGAPNVGASWAKDAYNQAELCLYAVHLAADMLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY SLLW+F+QLF++V +TKP ASR SAEIFV C+ + APA++D + F
Sbjct: 152 GTFVTKVFRSSDYNSLLWVFQQLFEKVEATKPTASRNVSAEIFVTCKGFKAPARVDPRLF 211
Query: 123 DPKYAF---------KELGAEDGKLNALKKKQVEKSKAL-------------GYPSDVNV 160
DPK+ F +G ED + KK + AL GY D +
Sbjct: 212 DPKWVFMMEGDEQEKAAVGEEDEEEITGKKAGSSGAAALNDYLKSAMKRRRGGY-EDESE 270
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
L+ V++FI P +L +++SK+
Sbjct: 271 LFSTATVAEFIASPAPAEVL---------------------------IKRSKL------- 296
Query: 221 PGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVL 280
+ A+ D E++ K P TT EI + D++VLG+ ++ LLKW +
Sbjct: 297 -----------VFATE----DCEAIRKSPYTTPEILDYMSDLKVLGKGELMALLKWRMRI 341
Query: 281 HDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKK 340
++ + K ++ GE E+EE+ ED + + E+ L RRE K + KK
Sbjct: 342 RRDREKASKVNQENDGEEEDEEEEEEDTL-ANARPGKSVDDELAALLSSRRREEKAELKK 400
Query: 341 VSKERTKLQEKMNLKMLL 358
+ERTK QE M KM L
Sbjct: 401 -QRERTKKQE-MRKKMSL 416
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR R+AFKLIQL +K+ FL+ ++ CVDLC APGGW QVA ++M A+S + D +K
Sbjct: 22 QGYRGRSAFKLIQLEKKYGFLKNARSCVDLCGAPGGWSQVAAKHMPANSKVICVDLMPIK 81
Query: 248 HPSTTVEIQ 256
V +Q
Sbjct: 82 PIKGVVTMQ 90
>gi|194383894|dbj|BAG59305.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 181/370 (48%), Gaps = 71/370 (19%)
Query: 33 VGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHST 92
G VY C + AS + GG F+TKVFRS+DY LLWIF+QLF+RV +T
Sbjct: 3 AGSCQVYACIQPYCGSGPGSNQASP--QCGGSFITKVFRSRDYQPLLWIFQQLFRRVQAT 60
Query: 93 KPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKLNALKKKQVEKSKAL 152
KPQASR+ESAEIFVVCQ ++AP K+D+KFFDPK+AFKE+ + + L K+ K KA
Sbjct: 61 KPQASRRESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELVTKK--KPKAE 118
Query: 153 GYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSK 212
GY LY V+ F+ P L A+E
Sbjct: 119 GYAEGDLTLYHRTSVTDFLRAANPVDFLSKASE--------------------------- 151
Query: 213 VCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRN 272
I DDE + +HP+TT +I+ CC+DIRVLGRK++R+
Sbjct: 152 -------------------------IMVDDEELAQHPATTEDIRVCCQDIRVLGRKELRS 186
Query: 273 LLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKA------------- 319
LL W L +K KE+ K G + E + ++ K
Sbjct: 187 LLNWRTKLRRYVAKKLKEQAKALDIGLSSGEEDEGDEEDSTAGTTKQPSKEEEEEEEEEQ 246
Query: 320 -TKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQI 378
+ + E+K +E ELKRKKKK+ +E+ K +E++ LKM L G + + + MF LS I
Sbjct: 247 LNQTLAEMKAQEVAELKRKKKKLLREQRKQRERVELKMDLPG-VSIADEGETGMFSLSTI 305
Query: 379 RTTDQLDLIT 388
R L+ +T
Sbjct: 306 RGHQLLEEVT 315
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 603 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 662
Query: 540 A 540
+
Sbjct: 663 S 663
>gi|401424577|ref|XP_003876774.1| putative FtsJ cell division protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493017|emb|CBZ28302.1| putative FtsJ cell division protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 925
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 171/363 (47%), Gaps = 78/363 (21%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L + K+A +LK G
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKAG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS D+ +LLW+FKQLF++V +TKPQASR ESAEIFVVC + AP +D FF
Sbjct: 153 GWFVTKVFRSPDFHNLLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFKAPKSIDPAFF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKA-LGYPSDVNVLYKNLPVSKFIEHETPTVLLQ 181
+P+ F E+G E ++A KS GY V + S F+ + P V L+
Sbjct: 213 NPQKVFAEVGQEK-IVSASGMLVTPKSNVPTGYDEFATVSHHVASFSDFLNADDPKVFLK 271
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
E + F
Sbjct: 272 THHE----------------------------------------------------LRFS 279
Query: 242 DES---VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKT-----------EK 287
D++ LK S+ E+ C D++ +G D+R +L+W + L EK E
Sbjct: 280 DDADKEYLKSKSSKKELVYLCGDLQQVGEADLRRMLRWREQLLREKAHRIQAAAAGTEED 339
Query: 288 EKEEEKEGGEGE---------EEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKK 338
+ + GG G +E++ + D E + + +E+ E++ ++ +ELKR++
Sbjct: 340 DDVDSMAGGNGSDDEDDDDDGKEKRDYHFDFDSPEG-VTQIARELLEIRKKKAKELKRRQ 398
Query: 339 KKV 341
KKV
Sbjct: 399 KKV 401
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+GYR+R+A+KLIQLNRK++FL KS+V VDLCAAPGGW QVA Q+M + S I+ D
Sbjct: 23 QGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQHMAIGSKIVGVD 77
>gi|401885967|gb|EJT50044.1| RNA methyltransferase [Trichosporon asahii var. asahii CBS 2479]
Length = 850
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT KCR + + + WK D+VLHDG+PNVG WV DA+ Q L L +L+LA+ L +G
Sbjct: 27 DITTPKCRNELRQHMHDWKADLVLHDGAPNVGAAWVQDAFSQNELVLQSLRLATEFLVKG 86
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY SL+W+F QLF+ V +TKP +SR SAEIFVVC+ +IAP +D KF
Sbjct: 87 GNFVTKVFRSQDYNSLMWVFNQLFRHVEATKPPSSRNVSAEIFVVCRDFIAPKHIDPKFL 146
Query: 123 DPKYAFKEL 131
DPK+ FK+L
Sbjct: 147 DPKHVFKDL 155
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R ++ ++ RPI+K+ EAK RKK + A R+++ KKK +ME D++D EKAR +
Sbjct: 726 VQALRDRQRALDARPIKKIAEAKGRKKMKAAARLERAKKKAAGVMETEDLNDGEKARQV 784
>gi|307110257|gb|EFN58493.1| hypothetical protein CHLNCDRAFT_19573, partial [Chlorella
variabilis]
Length = 358
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 137/276 (49%), Gaps = 57/276 (20%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITT KCR AI +E +DVVLHDG+PNVG W +AY Q L L AL++A+ +L
Sbjct: 68 VGDITTQKCRQAIKKETGGSLIDVVLHDGAPNVGGAWATEAYSQAWLVLEALRMATDVLA 127
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G FVTKVFRSKDY+ LL+ F+QLF +V +TKP ASR SAEIFVVC+ Y APAK+D +
Sbjct: 128 PKGTFVTKVFRSKDYSPLLYAFQQLFTKVEATKPVASRSTSAEIFVVCRGYKAPAKIDPR 187
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLL 180
DPK+ F+ + + + GY ++ +K L FI + P LL
Sbjct: 188 LLDPKHLFQVGAGG----RPGDGRGPSRCRLEGYAEGLSTTHKALTAGAFIAGDNPIELL 243
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
T + S AAF
Sbjct: 244 GQYTTI-----SLAAF-------------------------------------------- 254
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
V H +T E++ CKD++VLGR + + LL+W
Sbjct: 255 ----VRSHSATDAEVRTLCKDLQVLGRSEFKQLLRW 286
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
GYRSRA+FKLIQLNR + FL ++ +DLCAAPGGW QVA +NM S++ D +K
Sbjct: 1 GYRSRASFKLIQLNRTYYFLSGARSLLDLCAAPGGWCQVAVKNMPVGSLVIGVDLVAIK 59
>gi|406697378|gb|EKD00640.1| RNA methyltransferase [Trichosporon asahii var. asahii CBS 8904]
Length = 930
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 96/129 (74%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT KCR + + + WK D+VLHDG+PNVG WV DA+ Q L L +L+LA+ L +G
Sbjct: 93 DITTPKCRNELRQHMHDWKADLVLHDGAPNVGAAWVQDAFSQNELVLQSLRLATEFLVKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY SL+W+F QLF+ V +TKP +SR SAEIFVVC+ +IAP +D KF
Sbjct: 153 GNFVTKVFRSQDYNSLMWVFNQLFRHVEATKPPSSRNVSAEIFVVCRDFIAPKHIDPKFL 212
Query: 123 DPKYAFKEL 131
DPK+ FK+L
Sbjct: 213 DPKHVFKDL 221
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLI LNRK++ L +K C+DLCAAPGGW+QVA++ M S+I D +K
Sbjct: 23 QGYRARSAFKLIHLNRKYDLLSNAKCCIDLCAAPGGWLQVAEKYMPKGSLIIGVDLMPIK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R ++R + WK VLHD
Sbjct: 83 PLPHVIAFQADITTPKC--RNELRQHMHDWKADLVLHD 118
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R ++ ++ RPI+K+ EAK RKK + A R+++ KKK +ME D++D EKAR +
Sbjct: 806 VQALRDRQRALDARPIKKIAEAKGRKKMKAAARLERAKKKAAGVMETEDLNDGEKARQV 864
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 246 LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVV 305
LK TT +I +D++VLG+ D + L+KW + E K + E+
Sbjct: 322 LKSRHTTPDIVSNFEDLKVLGKGDFKALMKWRLAIRLEIGLDVK--------ASKTEEAT 373
Query: 306 EDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPT 365
ED EE E + ++E++ L +E+R + KR+KK+ ++ +TK +K+ L M DL
Sbjct: 374 EDVEVEEMDEEQQISEELKRLHEEKRAKQKREKKRKNEIKTKTIQKLQLGMTAPTDLDMD 433
Query: 366 END--DEEMFKLSQ 377
+ + EEMF L +
Sbjct: 434 DRELAGEEMFDLGE 447
>gi|321251839|ref|XP_003192196.1| RNA methyltransferase [Cryptococcus gattii WM276]
gi|317458664|gb|ADV20409.1| RNA methyltransferase, putative [Cryptococcus gattii WM276]
Length = 907
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 97/133 (72%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITT CR + + + WK D+VLHDG+PNVG WV DA+ Q L L +LKLA+ L
Sbjct: 91 VSDITTPHCRQTLRQHMHDWKADLVLHDGAPNVGSAWVQDAFTQNELVLQSLKLATEFLA 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLLW+F QLF+ V +TKP +SR SAEIFVVC+ +IAP +D K
Sbjct: 151 KGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPPSSRNVSAEIFVVCRDFIAPKHIDPK 210
Query: 121 FFDPKYAFKELGA 133
F DPK+ FK++ +
Sbjct: 211 FLDPKHVFKDIAS 223
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKL+ LNRK++ L K++ C+DLCAAPGGW+QVA++ M S II D ++
Sbjct: 23 QGYRARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEKYMPKGSLIIGVDLNAIK 82
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
P T + + R+ +R + WK VLHD
Sbjct: 83 PLPHVTTFVSDITTP---HCRQTLRQHMHDWKADLVLHD 118
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
+ R ++ ++ RPI+KV EAK RK+ + RM+K KKK + +ME+ ++ DAEKAR +R
Sbjct: 784 ADALRARQRALDARPIKKVAEAKGRKRMKAVARMEKAKKKADGVMESEEMGDAEKARQVR 843
>gi|294925458|ref|XP_002778927.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239887773|gb|EER10722.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 418
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 152/296 (51%), Gaps = 72/296 (24%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT KCR + +EL DVVL+DG+PNVG +W DAY+Q L L A+ LA+ +L++G
Sbjct: 92 DITTQKCRQFLLKELNGTPCDVVLNDGAPNVGASWAKDAYNQAELCLYAVHLAADMLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY SLLW+F+QLF++V +TKP ASR SAEIFV C+ + APA++D + F
Sbjct: 152 GTFVTKVFRSSDYNSLLWVFQQLFEKVEATKPTASRNVSAEIFVTCKGFKAPARVDPRLF 211
Query: 123 DPKYAF---------KELGAEDGKLNALKKKQVEKSKAL-------------GYPSDVNV 160
DPK+ F +G ED + KK + AL GY D +
Sbjct: 212 DPKWVFMMEGDEQEKAAVGEEDEEEITGKKAGSSGAAALNDYLKSAMKRRRGGY-EDESE 270
Query: 161 LYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAA 220
L+ V++FI P +L +++SK+
Sbjct: 271 LFSTATVAEFIASPAPAEVL---------------------------IKRSKL------- 296
Query: 221 PGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ A+ D E++ K P TT EI + D++VLG+ ++ LLKW
Sbjct: 297 -----------VFATE----DCEAIRKSPYTTPEILDYMSDLKVLGKGELMALLKW 337
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYR+R+AFKLIQL +K+ FL+ ++ CVDLC APGGW QVA ++M A+S + D +K
Sbjct: 22 QGYRARSAFKLIQLEKKYGFLKNARSCVDLCGAPGGWSQVAVKHMPANSKVICVDLMPIK 81
Query: 248 HPSTTVEIQ 256
V +Q
Sbjct: 82 PIKGVVTMQ 90
>gi|154283311|ref|XP_001542451.1| hypothetical protein HCAG_02622 [Ajellomyces capsulatus NAm1]
gi|150410631|gb|EDN06019.1| hypothetical protein HCAG_02622 [Ajellomyces capsulatus NAm1]
Length = 620
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 93/132 (70%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITTDKCR I + LK+WK D VLHDG+PNVG+ WV DA+ Q L L +LKLA+ L G
Sbjct: 92 DITTDKCRATIRQHLKSWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKDY LLW+FKQLF V +TKP +SR SAEIFVVCQ + AP + K
Sbjct: 152 GTFVTKVFRSKDYNPLLWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFKAPKHIVPKVL 211
Query: 123 DPKYAFKELGAE 134
DPK+ + G +
Sbjct: 212 DPKHGSQITGGK 223
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
KGYR+RAAFKLIQLN+K+ FL+KSKV +DLCAAPG W QVA + M + S+I D + +K
Sbjct: 22 KGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMPSQSLIIGVDLAPIK 81
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWK---VLHD 282
+ Q + R +R LK WK VLHD
Sbjct: 82 PIPKVITFQSDITTDKC--RATIRQHLKSWKADTVLHD 117
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K IN RPI+KV+EAK RKK + A+R++K++KK L E +S+ +KA+ I
Sbjct: 503 REKMRAINARPIKKVLEAKGRKKFKAAQRLEKLRKKSALLAEDEAMSEKDKAQTI 557
>gi|84997481|ref|XP_953462.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304458|emb|CAI76837.1| hypothetical protein, conserved [Theileria annulata]
Length = 920
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 202/425 (47%), Gaps = 47/425 (11%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI T KC IT L VDVVLHDGSPN+G NW DA++Q L L A K+A +L++G
Sbjct: 92 DIRTPKCLSLITNHLNGMNVDVVLHDGSPNMGCNWNLDAFNQNVLVLTACKMACSLLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY SL+W+ F +V TKPQ+SR SAEIF VC + +D + F
Sbjct: 152 GIFVTKVFRSSDYNSLVWMLSNCFDKVKVTKPQSSRNVSAEIFAVCIGFKTLKLIDQRLF 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKAL--GYPSDVNVLYKNLP-VSKFIEHETPTV- 178
+P Y F+ +++ ++ +S L P ++ K L SK H + T+
Sbjct: 212 NPDYVFQNSDV------PIEQNELSQSNKLLSNTPKSLSNTPKTLTHTSKTPNHVSKTLN 265
Query: 179 -LLQHATEVGK-GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
LL+ ++ + GY + I + +FL+ + V L N + +
Sbjct: 266 QLLKEQKKINREGYEG-PIYSEISV---IDFLKSKEPAVILVTYNKLLFTTTNSNTIGTK 321
Query: 237 IIHFDDESVL----KHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEK-- 289
DE +L ++P TT EI+ C D++V G+ D+++LLKW +K+++ K K
Sbjct: 322 ST---DEEILEMVKENPLTTEEIKLLCSDLKVAGKSDLQSLLKWRFKLINTIPNLKTKSN 378
Query: 290 --EEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRK-KKKVSKERT 346
+ K G +G E + M ++ D E+ +K K K+ E+
Sbjct: 379 PSDSTKPGIDGSEPTISDTTVSTTTDPTAMDT---VDSTIDSTVIEMDKKIKNKIESEKR 435
Query: 347 KLQEKMNLKMLLKGDLGPTEND-----DEEMFKLSQIRTTDQLDLITASKPEVFAD-SDE 400
+L+ K KML K +G N D ++F L+ S PE D S+
Sbjct: 436 RLERKQR-KMLKKLKIGKNSNSSLITPDPDLFSLNSSN--------LQSYPEALPDGSES 486
Query: 401 EHIDI 405
E DI
Sbjct: 487 EETDI 491
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSR+AFK+IQL++KF Q V VDLCAAPGGW+QVA + SS I
Sbjct: 23 GYRSRSAFKIIQLSKKFNIFQNCNVLVDLCAAPGGWLQVASNQLPVSSTI 72
>gi|398017708|ref|XP_003862041.1| FtsJ cell division protein, putative [Leishmania donovani]
gi|322500269|emb|CBZ35347.1| FtsJ cell division protein, putative [Leishmania donovani]
Length = 925
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 145/306 (47%), Gaps = 68/306 (22%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L + K+A +LK
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKAN 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS D+ +LLW+FKQLF++V +TKPQASR ESAEIFVVC + AP +D FF
Sbjct: 153 GWFVTKVFRSPDFHNLLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFKAPKSIDPAFF 212
Query: 123 DPKYAFKELGAE-----DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
+P+ F E+G E G L A K + GY V + S F+ + P
Sbjct: 213 NPQKVFAEVGQEKIVSASGMLVAPK-----SNVPTGYDEFATVSHHVASFSDFLNADDPK 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
V L+ E
Sbjct: 268 VFLKTHHE---------------------------------------------------- 275
Query: 238 IHFDDES---VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEK---EKEE 291
+ F D++ LK S+ E+ C D++ +G D+R +L+W + L EKT + +
Sbjct: 276 LRFSDDADKEYLKSKSSKKELVYLCGDLQQVGEADLRRMLRWREQLLREKTHRIQVDAAG 335
Query: 292 EKEGGE 297
+EGG+
Sbjct: 336 TEEGGD 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+GYR+R+A+KLIQLNRK++FL KS+V VDLCAAPGGW QVA Q+M + S I+ D
Sbjct: 23 QGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQHMAIGSKIVGVD 77
>gi|146091082|ref|XP_001466438.1| putative FtsJ cell division protein [Leishmania infantum JPCM5]
gi|134070800|emb|CAM69158.1| putative FtsJ cell division protein [Leishmania infantum JPCM5]
Length = 925
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 145/306 (47%), Gaps = 68/306 (22%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L + K+A +LK
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKAN 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS D+ +LLW+FKQLF++V +TKPQASR ESAEIFVVC + AP +D FF
Sbjct: 153 GWFVTKVFRSPDFHNLLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFKAPKSIDPAFF 212
Query: 123 DPKYAFKELGAE-----DGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
+P+ F E+G E G L A K + GY V + S F+ + P
Sbjct: 213 NPQKVFAEVGQEKIVSASGMLVAPK-----SNVPTGYDEFATVSHHVASFSDFLNADDPK 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
V L+ E
Sbjct: 268 VFLKTHHE---------------------------------------------------- 275
Query: 238 IHFDDES---VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEK---EKEE 291
+ F D++ LK S+ E+ C D++ +G D+R +L+W + L EKT + +
Sbjct: 276 LRFSDDADKEYLKSKSSKKELVYLCGDLQQVGEADLRRMLRWREQLLREKTHRIQVDAAG 335
Query: 292 EKEGGE 297
+EGG+
Sbjct: 336 TEEGGD 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+GYR+R+A+KLIQLNRK++FL KS+V VDLCAAPGGW QVA Q+M + S I+ D
Sbjct: 23 QGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQHMAIGSKIVGVD 77
>gi|145354875|ref|XP_001421700.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581938|gb|ABO99993.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 376
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 119/191 (62%), Gaps = 2/191 (1%)
Query: 1 MEDITTDKCRIAITREL-KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
+EDITT CR A+ R + K DVV+HDG+PNVG N+ ++Y Q LTL +L+LA+ L
Sbjct: 169 VEDITTQSCRAALKRVTPQGLKYDVVIHDGAPNVGGNFAKESYTQAALTLDSLRLATEFL 228
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
GGWFVTKVFRS +Y +LL+ F+QLF++V STKP ASR SAEI+VVC Y+AP K+D
Sbjct: 229 GPGGWFVTKVFRSVEYHALLYAFQQLFKKVESTKPVASRGTSAEIYVVCSGYLAPTKIDP 288
Query: 120 KFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+ D ++ F + AE L+ K K GY V+ LYK +FI +E P +
Sbjct: 289 RLLDARHLFADTEAEIQPLDVTKDNGKRKRNRSGYEDGVSTLYKECTAEEFIVNEKPGEM 348
Query: 180 L-QHATEVGKG 189
L H T + G
Sbjct: 349 LGSHHTFILDG 359
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 68/101 (67%), Gaps = 10/101 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESV- 245
+G+RSRAAFKL+QLNRK++FL K++ C+DLCAAPGGW+QVA++ M M+S+I+ D +
Sbjct: 101 QGFRSRAAFKLVQLNRKYDFLSKARACMDLCAAPGGWLQVAQKYMPMSSTIVGVDLAPIR 160
Query: 246 -LKHPSTTVE---IQECCKDIRVLGRKDVRNLLKWWKVLHD 282
++ +T VE Q C R ++ LK+ V+HD
Sbjct: 161 PIRGVTTLVEDITTQSC----RAALKRVTPQGLKYDVVIHD 197
>gi|422295206|gb|EKU22505.1| et-dependent rrna methyltransferase spb1, partial [Nannochloropsis
gaditana CCMP526]
Length = 533
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 141/281 (50%), Gaps = 55/281 (19%)
Query: 1 MEDITTDKCRIAITRELKTW-KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
+ DITT +CR A+ RE++ VDVVL DG+PNVG + DA+ Q + L AL+ A+ L
Sbjct: 91 VHDITTPECRAAVKREMRAHPHVDVVLCDGAPNVGATYDKDAFVQNEIALAALRAATCHL 150
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
GG F+TKV+RS+DY +L+W+F QLF V + KP +SR++SAEIFV+C Y AP +D
Sbjct: 151 GPGGTFLTKVYRSQDYNALMWVFNQLFASVQAIKPSSSRQQSAEIFVLCLRYKAPHSIDP 210
Query: 120 KFFDPKYAFKEL--GAEDGKLNALKKKQV-EKSKALGYPSDVNV-LYKNLPVSKFIEHET 175
K DP Y F E+ G+ D ++ + +K GY + V L++ V+ F+ E
Sbjct: 211 KLLDPAYVFAEMEGGSGDKAISIFSAQYARQKRHRSGYDGEAGVLLHRKASVTAFLASED 270
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
P L +EV +PG
Sbjct: 271 PVQFLSEQSEV-------------------------------VFSPGC------------ 287
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
L+HP TT E++ C D++VLG+ D + LLKW
Sbjct: 288 -------TPFLEHPLTTEEVKSCLADLKVLGKSDFKALLKW 321
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 46/51 (90%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKLIQ+NRK++FL K+KVC+DLCAAPGGW QVA ++M + SII
Sbjct: 23 QGYRSRAAFKLIQINRKYDFLSKAKVCLDLCAAPGGWCQVAAKHMPSDSII 73
>gi|389601830|ref|XP_001565969.2| putative FtsJ cell division protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505203|emb|CAM45493.2| putative FtsJ cell division protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 927
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 139/275 (50%), Gaps = 51/275 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI DK R I LK VD V+HDG+PNVG W D + Q L L + K+A +LK
Sbjct: 93 DIVDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKAS 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS D+ +LLW+FKQLF +V +TKPQASR ESAEIFVVC + AP +D FF
Sbjct: 153 GWFVTKVFRSPDFHNLLWVFKQLFDKVEATKPQASRMESAEIFVVCAGFKAPKNIDPAFF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYP-SDVNVLYKNLPVSKFIEHETPTVLLQ 181
+P+ F E+G E K V S L P SDV + Y + H
Sbjct: 213 NPQKVFAEVGEE---------KIVSASGLLVTPKSDVPIGYDEFAT---VSHRV------ 254
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+F +FL+ P G++++ + + +
Sbjct: 255 ------------ASFS--------DFLRADD--------PKGFLKIHHELRFSDDV---- 282
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
D++ LK S+ E+ C D++ +G D+R +L+W
Sbjct: 283 DKAYLKSKSSKKELVYLCGDLQQVGEADLRRMLRW 317
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+GYR+R+A+KLIQLNRK++FL KS+V VDLCAAPGGW QVA Q+M + S I+ D
Sbjct: 23 QGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQHMPIGSKIVGVD 77
>gi|71029650|ref|XP_764468.1| rRNA methyltransferase [Theileria parva strain Muguga]
gi|68351422|gb|EAN32185.1| rRNA methyltransferase, putative [Theileria parva]
Length = 924
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 158/321 (49%), Gaps = 45/321 (14%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI T KC IT +L VDVVLHDGSPN+G NW DA++Q L L A KLA +L++G
Sbjct: 92 DIRTPKCHSLITNQLNGLSVDVVLHDGSPNMGCNWNLDAFNQNVLVLTAAKLACSLLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS DY SL+W+ F+RV TKPQ+SR SAEIF VC + + +D + F
Sbjct: 152 GIFVTKVFRSSDYNSLVWMLGNCFERVKVTKPQSSRNVSAEIFAVCIGFKSLKLIDPRLF 211
Query: 123 DPKYAFKE----LGAEDGK-----------LNALKKKQVEKSKALGYPSDVNVLYKNLPV 167
+ + F+ L ED K LN L K+Q +K+ GY +Y + V
Sbjct: 212 NADFVFQSSNTPLSIEDDKSAKTKNQAPKTLNQLLKEQ-KKTNREGYDG---AIYSEISV 267
Query: 168 SKFIEHETP-TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQ 226
F++ + P T+L+ H K F + +
Sbjct: 268 IDFLKSKEPATILVTH--------------------NKLLFTTTHNCINSNHNSVNSSIN 307
Query: 227 VAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKT 285
+ ++ +ES P TT EI+ C D++V G+ D+++LLKW +K+++ +
Sbjct: 308 STTGTIGDDDVLSMVEES----PLTTEEIKLLCSDLKVAGKSDLQSLLKWRFKLINSIPS 363
Query: 286 EKEKEEEKEGGEGEEEEKVVE 306
K E+ E+E V E
Sbjct: 364 LNRKSSEQSESLKPEDESVAE 384
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSR+AFK+IQL +KF Q V VDLCAAPGGW+QVA + SS I
Sbjct: 23 GYRSRSAFKIIQLAKKFNIFQNCNVLVDLCAAPGGWLQVASNQLPVSSTI 72
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETL 523
LV +Y++K +E+ RPI+KV+EAK RK +R +R+ + K+E +
Sbjct: 794 LVKKYKQKLLELKNRPIKKVLEAKHRKAQRAKKRLRSILPKIEAI 838
>gi|384250298|gb|EIE23778.1| FtsJ-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 361
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 138/274 (50%), Gaps = 55/274 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT K R AI +E ++ VLHDG+PNVG W +AY Q L L AL+LA+ +L
Sbjct: 91 DITTQKARQAIKKEASGDLIECVLHDGAPNVGGAWSSEAYSQSALVLEALRLATDVLGPK 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRSKDY +LL+ FKQLF +V +TKP ASR SAEIFVVC Y APAK+D +
Sbjct: 151 GTFVTKIFRSKDYNALLYAFKQLFDKVEATKPAASRNTSAEIFVVCLGYKAPAKIDPRLL 210
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ FK A G L++K +K GY ++ +K + + F+ E P +L
Sbjct: 211 DPKHLFK---ATLGPDALLRQKVKQKRFREGYEDGLSSTHKAMSAAAFVASEEPVEML-- 265
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
G+ R AA ++
Sbjct: 266 ----GRYSRCEAAAAFVR------------------------------------------ 279
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
H TT EI+ C D++VLGR + + LLKW
Sbjct: 280 ----GHKETTAEIRALCSDLQVLGRSEFKQLLKW 309
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 43/51 (84%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+RSRAAFKLIQLNR+F FL + + +DLCAAPGGW+QVA++ + SS+I
Sbjct: 21 QGFRSRAAFKLIQLNRQFHFLDRCRSVLDLCAAPGGWLQVAQKALPVSSLI 71
>gi|389593507|ref|XP_003722007.1| putative FtsJ cell division protein [Leishmania major strain
Friedlin]
gi|321438509|emb|CBZ12268.1| putative FtsJ cell division protein [Leishmania major strain
Friedlin]
Length = 924
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 143/288 (49%), Gaps = 55/288 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L + K+A +LK
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKAN 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS D+ +LLW+FKQLF++V +TKPQASR ESAEIFVVC + AP +D FF
Sbjct: 153 GWFVTKVFRSPDFHNLLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFKAPKNIDPAFF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
+P+ F E+G E K V S L P N+P +E + H
Sbjct: 213 NPQKVFAEVGQE---------KIVSASGMLVTPK------SNVPTG----YEEFATVSHH 253
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
A+F +FL P G+++ + + F D
Sbjct: 254 V----------ASFS--------DFLNADD--------PKGFLKTHHE-------LRFSD 280
Query: 243 ES---VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEK 287
++ L S+ E+ C D++ +G D+R +L+W + L EK +
Sbjct: 281 DADKEYLTSKSSKKELVYLCGDLQQVGEADLRRMLRWREQLLREKIHR 328
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+GYR+R+A+KLIQLNRK++FL KS+V VDLCAAPGGW QVA Q+M + S I+ D
Sbjct: 23 QGYRARSAYKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAQHMAIGSKIVGVD 77
>gi|424513744|emb|CCO66366.1| predicted protein [Bathycoccus prasinos]
Length = 1031
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 223/442 (50%), Gaps = 66/442 (14%)
Query: 1 MEDITTDKCRIAITRELK-TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
+EDITT CR AI R K D VLHDG+PNVG N+ +AY Q LTL ALKLA+ L
Sbjct: 89 VEDITTPSCRAAIKRVTPDGLKYDCVLHDGAPNVGGNYAKEAYSQAALTLDALKLATEFL 148
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
GWFVTKVFRS++Y +LL+ F+QLF++V STKP ASR SAEIFVVC+ Y+AP K+D
Sbjct: 149 TLDGWFVTKVFRSQEYHALLYAFQQLFKKVESTKPVASRDSSAEIFVVCKGYLAPTKIDP 208
Query: 120 KFFDPKYAFKELGAEDGKL---------NALKKKQVEKSKALGYPSDVNVLYKNLPVSKF 170
+ +Y F + EDG + LK ++ +++++ GY ++ LYK F
Sbjct: 209 RLLKAEYLFANV--EDGGQGNKGGQQNRDVLKVEKAKRNRS-GYEDGLHSLYKETYAENF 265
Query: 171 IEHETPTVLL-QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
I +E P +L + + G + + ++ F + +D C
Sbjct: 266 ITNEKPAEMLGMYHCFILDGGKGKKGTNVVPPKDGF-------MDLDACE---------- 308
Query: 230 QNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWW-----KVLHDEK 284
T EI+ +D+ VL + D + LLKW ++ ++K
Sbjct: 309 --------------------ETNEEIRTLFRDLGVLNKSDFKMLLKWRLQVRKRLGMEDK 348
Query: 285 TEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKE 344
K + + E+E + + E+E E + E+EEL+ + + ++KK +
Sbjct: 349 KVKPRTTTNANEDEEDENNENKAAVPEDENERL--LSEMEELQGN--MDAEARRKKKKQA 404
Query: 345 RTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT-ASKPEV----FADSD 399
+ K ++++ ++ LKGD G +E++F L +++T + +D + + P V + DSD
Sbjct: 405 KMKQKDRIRAQLGLKGD-GEAIVAEEDLFSLVRLKTKEDVDTVANQAAPSVPADYYEDSD 463
Query: 400 EEHIDIVPKKIKYNVEKSELDD 421
E ++ +Y+ E S+ ++
Sbjct: 464 SELNAARRRQNQYDSEDSDAEN 485
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVL 246
+G+R+R+AFKL+QLNRK++FL +K C+DLCAAPGGW+QVA++ M M S+I+ D S+
Sbjct: 21 QGFRARSAFKLVQLNRKYDFLSSAKACLDLCAAPGGWLQVAQKYMPMQSTIVGIDLASIK 80
Query: 247 KHPSTTVEIQE-CCKDIRVLGRKDVRNLLKWWKVLHD 282
T +++ R ++ + LK+ VLHD
Sbjct: 81 PIRGCTTLVEDITTPSCRAAIKRVTPDGLKYDCVLHD 117
>gi|145551003|ref|XP_001461179.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429012|emb|CAK93806.1| unnamed protein product [Paramecium tetraurelia]
Length = 902
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 120/186 (64%), Gaps = 6/186 (3%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT +C + +E+ K DV LHDG+PNVG +W DAY+Q L L AL+LAS LK+
Sbjct: 90 QDITTPQCVQLLKKEI-PQKADVFLHDGAPNVGASWAKDAYNQNDLVLSALRLASQFLKK 148
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRS DY SL+W+F + F +V +TKP ASR SAEIFVVC Y+AP +D K
Sbjct: 149 GGVFVTKVFRSTDYNSLMWVFNKFFSKVEATKPLASRFVSAEIFVVCLDYLAPEYIDEKL 208
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSK--ALGYPSDVN-VLYKNLPVSKFIEHETP-T 177
FD K+ FK+ D ++K+ V +++ GY DV+ +Y+ + +F+ E P
Sbjct: 209 FDSKHVFKDTET-DMLQQQIQKEIVSRTQRHRSGYADDVHQTVYQMIDFEEFLHAENPYP 267
Query: 178 VLLQHA 183
+ +++A
Sbjct: 268 IFIEYA 273
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 40/51 (78%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL QLNRK+ FL ++ VDLCAAPGGWMQV Q M SSII
Sbjct: 21 QGYRSRAAFKLFQLNRKYNFLNNARTVVDLCAAPGGWMQVCAQIMPTSSII 71
>gi|145550654|ref|XP_001461005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428837|emb|CAK93608.1| unnamed protein product [Paramecium tetraurelia]
Length = 954
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 120/186 (64%), Gaps = 6/186 (3%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DITT +C + +E+ K DV LHDG+PNVG +W DAY+Q L L AL+LAS LK+
Sbjct: 142 QDITTPQCVQLLKKEI-PQKADVFLHDGAPNVGASWAKDAYNQNDLVLSALRLASQFLKK 200
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FVTKVFRS DY SL+W+F + F +V +TKP ASR SAEIFVVC Y+AP +D K
Sbjct: 201 GGVFVTKVFRSTDYNSLMWVFNKFFSKVEATKPLASRFVSAEIFVVCLDYLAPEYIDEKL 260
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSK--ALGYPSDVN-VLYKNLPVSKFIEHETP-T 177
FD K+ FK+ D ++K+ V +++ GY DV+ +Y+ + +F+ E P
Sbjct: 261 FDSKHVFKDTET-DMLQQQIQKEIVSRTQRHRSGYADDVHQTVYQMINFEEFLHAENPYP 319
Query: 178 VLLQHA 183
+ +++A
Sbjct: 320 IFIEYA 325
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL QLNRK+ FL ++ VDLCAAPGGWMQV Q M SS I
Sbjct: 73 QGYRSRAAFKLFQLNRKYNFLNNARTVVDLCAAPGGWMQVCAQIMPTSSTI 123
>gi|429329913|gb|AFZ81672.1| hypothetical protein BEWA_010890 [Babesia equi]
Length = 762
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 142/279 (50%), Gaps = 51/279 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI T KCR I LK +VD+VLHDG+PN+G NW DA++Q L L A KLAS ILK+G
Sbjct: 92 DIRTAKCRSMIMNHLKGAEVDLVLHDGAPNMGCNWNMDAFNQNVLVLDAAKLASSILKKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS DY SL+W+ F +V TKPQ+SR SAEIF VC + + LD + F
Sbjct: 152 GIFVTKIFRSADYNSLIWMLSNCFDKVKVTKPQSSRNVSAEIFAVCIGFKSLKGLDPRLF 211
Query: 123 DPKYAF---KELGAEDGKLNALKKKQVEKSKAL--GYPSDVNVLYKNLPVSKFIEHETPT 177
+ Y F ++ AED +L + EKSKA GY + + + +F+ + P
Sbjct: 212 NCDYVFLSERQTHAEDNAKKSLNQLIKEKSKARKEGYEAGD---FCEHTILEFLRSDNPA 268
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
LL A SR F +SK D S I
Sbjct: 269 NLLVSA--------SRLVF-------------RSKDSED------------------SDI 289
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ + P TT EI+ C DI+V G+ D++++LKW
Sbjct: 290 LDI----IQNDPITTDEIKLLCSDIQVAGKADLQSILKW 324
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSR+AFK+IQL +KF F + V VDLCAAPGGW+QVA + + SS I D +K
Sbjct: 23 GYRSRSAFKIIQLAKKFNFFENCNVVVDLCAAPGGWLQVASKQLPVSSTIIGVDLVQIKP 82
Query: 249 PSTTVEIQECCKDIRVL-GRKDVRNLLKWWK---VLHD 282
+ Q DIR R + N LK + VLHD
Sbjct: 83 IKGVLTFQA---DIRTAKCRSMIMNHLKGAEVDLVLHD 117
>gi|401396511|ref|XP_003879839.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
gi|325114247|emb|CBZ49804.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
Length = 988
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 152/279 (54%), Gaps = 22/279 (7%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C + + +K +VD+VLHDGSPN+G +W DA++Q L L A +LA +L G
Sbjct: 97 DITTAACAAKLRKLVKFGEVDLVLHDGSPNMGTDWSVDAFNQNVLVLSAARLACQLLAAG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
FV+KVFRS DY +LL++ + LF RV +TKPQASR SAEIFVVC+ + PA LD + F
Sbjct: 157 ATFVSKVFRSGDYAALLYVLQTLFDRVDATKPQASRAVSAEIFVVCRGFKKPAVLDERLF 216
Query: 123 DPKYAFKELGAEDGKL---NALKKKQVEKSKALGYPSDVNVLY--KNLPVSKFIEHETPT 177
DPKY F + E G+ ALK ++ ++ + + + K +F E
Sbjct: 217 DPKYVFLQAEDETGEQPSKKALKDEEGGEAAEGESDEEEGIFFGTKGGKKGQFAE----- 271
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
L++ + + A + I ++ F +SK L ++ A++
Sbjct: 272 -LVRRRAKRHRNGDILAGLRRISVDEFF----RSKDPTTLL------VEQAREIFFQDGA 320
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ +E+V H TT EI++C D++VLG+ ++ +LKW
Sbjct: 321 LPL-EEAVRAHRLTTQEIRDCLTDVQVLGKAELAAILKW 358
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQV-AKQNMMASSIIHFD 241
+GYR+R+AFKL+QL+++F QK+ VDLCAAPGGW+QV AK +AS+I+ D
Sbjct: 26 QGYRARSAFKLLQLSQRFNLFQKNCSRVVDLCAAPGGWLQVAAKHCPVASTIVGVD 81
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+ EYR+K ++I+ RPIRKV EA+ARKK R+ RR+ K+K + + E+ + ++A KAR I
Sbjct: 851 LMREYRQKLLDISRRPIRKVQEARARKKLREKRRLQKVKSQAAAVAESTEFTEAAKARAI 910
>gi|209883044|ref|XP_002142954.1| rRNA (uridine-2'-O-)-methyltransferase 3 [Cryptosporidium muris
RN66]
gi|209558560|gb|EEA08605.1| rRNA (uridine-2'-O-)-methyltransferase 3, putative [Cryptosporidium
muris RN66]
Length = 920
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 92/126 (73%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT++C+ I L+ VDVVLHDG+PNVG +W DAY Q L + + KLA IL+ G
Sbjct: 92 DITTEQCKKLILNNLEGLSVDVVLHDGAPNVGTSWNRDAYIQNELVVHSTKLACDILRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TK+FRS DY SL+W+ QLF+ V +TKPQ+SR SAEIF+VC Y AP K+D+KFF
Sbjct: 152 GIFITKIFRSSDYNSLIWVLNQLFKTVRATKPQSSRNVSAEIFLVCLDYKAPHKIDSKFF 211
Query: 123 DPKYAF 128
DPK+ F
Sbjct: 212 DPKFIF 217
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYR+R+AFKLIQL +K++ + +V VDLCAAPGGW+QVAK++M SS II D S+
Sbjct: 22 QGYRARSAFKLIQLAQKYDIFKNCQVLVDLCAAPGGWLQVAKRHMGVSSKIIGVDLVSIK 81
Query: 247 KHPSTTV 253
P T
Sbjct: 82 SIPGVTT 88
>gi|302843764|ref|XP_002953423.1| hypothetical protein VOLCADRAFT_63770 [Volvox carteri f.
nagariensis]
gi|300261182|gb|EFJ45396.1| hypothetical protein VOLCADRAFT_63770 [Volvox carteri f.
nagariensis]
Length = 440
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
++DITT +CR AI RE K+DVVLHDG+PNVG W +AY+Q L L +LKLA L
Sbjct: 90 VQDITTQQCRSAIKREAGNAKMDVVLHDGAPNVGGAWASEAYNQSTLVLDSLKLAVDTLA 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G FVTK+FRSKDY +LL+ F QLF++V +TKP ASR SAEIFVVC + APAK+D +
Sbjct: 150 PKGTFVTKIFRSKDYNALLYAFNQLFEKVEATKPAASRNASAEIFVVCIGFKAPAKIDPR 209
Query: 121 FFDPKYAFKELGAED---GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D K F+E+ G L++K ++ GY ++ ++ F+ ++P
Sbjct: 210 LLDHKVLFQEVTEPKKVMGPEALLRQKIKQRRFREGYEEGISTSHRFTSALAFLVSDSPV 269
Query: 178 VLLQHAT-EVGKGYRSRAA 195
+L T E+ RS AA
Sbjct: 270 EMLGSFTEELAAKIRSHAA 288
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKLIQLNRK+ FL K + +DLCAAPGGW+QVA + M S+I D + +K
Sbjct: 22 QGYRSRAAFKLIQLNRKYNFLGKCRALLDLCAAPGGWLQVAAKTMPVGSLILGVDLAPIK 81
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 245 VLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLH---------DEKTEKEKEEEKEG 295
+ H +TT EI+ CKD++VLGR + + LL+W L +E+ K + +
Sbjct: 283 IRSHAATTAEIKSLCKDLQVLGRSEFKQLLRWRLALRKDLKEDLGTEEEAAKAGHRKAKA 342
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKK 340
+G++ + E ++ +E + A ++ LKD+ RE KR+K+K
Sbjct: 343 ADGKQPQPADGAEAPQDPEEALLA--DMAALKDKMAREAKREKRK 385
>gi|340052440|emb|CCC46720.1| putative FtsJ cell division protein [Trypanosoma vivax Y486]
Length = 914
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 155/307 (50%), Gaps = 54/307 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I L+ VD V+HDG+PNVG W D + Q L L A K+AS +L+ G
Sbjct: 93 DITDDKTRKIIVTYLRREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKMASTLLRPG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF +V +TKP ASR ESAEIFVVC Y AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLVWVMKQLFDKVEATKPLASRMESAEIFVVCAGYKAPKQLDPAMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYP-SDVNVLYKNLPVSKFIEHETPTVLLQ 181
+ + F ++ E K + S AL P S+V + Y+ I+H T
Sbjct: 213 NAQKVFSDVEEE---------KILTPSGALALPKSNVPLGYEEFAT---IQHHVATF--- 257
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+FL C+ P +++ + S +
Sbjct: 258 -----------------------SDFLN--------CSDPKSFLRSHHELRFTSP----E 282
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK---EGGEG 298
D+++L+ + E+ C D++ +G DVR +++W + + EK ++ +++E+ GEG
Sbjct: 283 DKALLRSKYSKKELVYLCGDLQQVGNADVRRMIRWREQILREKAQQLRKQEQGRLADGEG 342
Query: 299 EEEEKVV 305
+ +V
Sbjct: 343 FDGNSLV 349
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKLIQLNRK++FL K +V VDLCAAPG W QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLIQLNRKYDFLAKCRVLVDLCAAPGSWCQVAAKHMPVGSKIVGVD 77
>gi|343472393|emb|CCD15434.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 904
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 179/358 (50%), Gaps = 72/358 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +K R I LK VD V+HDG+PNVG W D + Q L L A K+AS +L+ G
Sbjct: 93 DITDEKTRKIIMTYLKREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKMASKLLRLG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF++V +TKP ASR ESAEIFVVC Y AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVMKQLFEKVEATKPLASRMESAEIFVVCAGYKAPKQLDPSMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
+ + F + VE+ K L + V N+PV + E T +QH
Sbjct: 213 NAQKVFSD---------------VEEEKILTPSGTLVVPKSNVPVG-YDEFAT----IQH 252
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
AAF +F+Q S P +++ + + ++
Sbjct: 253 HV---------AAFS--------DFMQSSD--------PKTFLRSHHELRFTTP----EE 283
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEK-----EEEKEGGE 297
+++LK + E+ C D++ +G D++ L++W + L E+ K E + GGE
Sbjct: 284 KALLKSKHSKKELVYLCGDLQQVGDADLKRLIRWREQLLREQARALKQRAALEAAENGGE 343
Query: 298 --------------GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKV 341
E +E + ++D E + K +E+ EL+ ++ RE+K+K+KK+
Sbjct: 344 ISADGVDDGDADDSDENDEGI---DLDSAEG-VAKMARELLELRKKQSREMKKKQKKI 397
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKL+QLNRK++FL K +V VDLCAAPG W QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLVQLNRKYDFLAKCRVLVDLCAAPGSWCQVAAKHMPVGSKIVGVD 77
>gi|342180038|emb|CCC89514.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 929
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 179/358 (50%), Gaps = 72/358 (20%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +K R I LK VD V+HDG+PNVG W D + Q L L A K+AS +L+ G
Sbjct: 93 DITDEKTRKIIMTYLKREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKMASKLLRLG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF++V +TKP ASR ESAEIFVVC Y AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVMKQLFEKVEATKPLASRMESAEIFVVCAGYKAPKQLDPSMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
+ + F + VE+ K L + V N+PV + E T +QH
Sbjct: 213 NAQKVFSD---------------VEEEKILTPSGTLVVPKSNVPVG-YDEFAT----IQH 252
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
AAF +F+Q S P +++ + + ++
Sbjct: 253 HV---------AAFS--------DFMQSSD--------PKTFLRSHHELRFTTP----EE 283
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEK-----EEEKEGGE 297
+++LK + E+ C D++ +G D++ L++W + L E+ K E + GGE
Sbjct: 284 KALLKSKHSKKELVYLCGDLQQVGDADLKRLIRWREQLLREQARALKQRAALEAAENGGE 343
Query: 298 --------------GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKV 341
E +E + ++D E + K +E+ EL+ ++ RE+K+K+KK+
Sbjct: 344 ISADGVGDGDADDSDENDEGI---DLDSAEG-VAKMARELLELRKKQSREMKKKQKKI 397
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKL+QLNRK++FL K +V VDLCAAPG W QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLVQLNRKYDFLAKCRVLVDLCAAPGSWCQVAAKHMPVGSKIVGVD 77
>gi|407393473|gb|EKF26619.1| FtsJ cell division protein, putative [Trypanosoma cruzi
marinkellei]
Length = 911
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 176/356 (49%), Gaps = 70/356 (19%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L A K+A+ +LK
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPS 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF++V +TKP ASR ESAEIFVVC + AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVLKQLFEKVEATKPLASRMESAEIFVVCAGFKAPKQLDPSMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYP-SDVNVLYKNLPVSKFIEHETPTVLLQ 181
+ + F ++G E K + S AL P S+V Y + H
Sbjct: 213 NAQKVFSDVGEE---------KILTPSGALVVPKSNVPTGYSEFAT---VSHHV------ 254
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+F EFL C+ P +++ + +++ +
Sbjct: 255 ------------ASFS--------EFLH--------CSDPKSFLRSHHELRFSAA----E 282
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG------ 295
D+ LK + E+ C D++ +G D+R +L+W + L E+ KE ++E
Sbjct: 283 DKVYLKSKHSKKELVYLCGDLQQVGDADLRRMLRWREQLLREQAAMAKEADEEEDADDEE 342
Query: 296 ----------GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKV 341
G G ++E+ + ++D E + K +E+ EL+ + + LK+K++K+
Sbjct: 343 MGDDDDGDSVGNGSDDEEGI--DLDSAEG-VAKIARELLELRKRQSKLLKKKQRKI 395
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKLIQLNRK++FL KS+V VDLCAAPGGW QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAKHMPVGSKIVGVD 77
>gi|357474413|ref|XP_003607491.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
gi|355508546|gb|AES89688.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
Length = 868
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 162/349 (46%), Gaps = 60/349 (17%)
Query: 2 EDITTDKCRI---AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT +C+ I E DV+LHDGSPNVG W +A Q L + A+KLA+
Sbjct: 91 EDITRPECKSRVRKIMNENGYRAFDVILHDGSPNVGGAWAQEATSQNSLVIDAIKLATQF 150
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY S++W K+LF++V KP ASR ESAEI+++ Y+APAK+D
Sbjct: 151 LAPKGTFVTKVFRSQDYNSVVWCMKKLFEKVEVEKPPASRSESAEIYILGIKYLAPAKID 210
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ K+ + +K GY L K + F+ + P
Sbjct: 211 PRILDIKHLFEASAQPIAKMVDVLGNNKQKRHRDGYEDGNTTLRKVSSAANFVWTDAPLE 270
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T + S
Sbjct: 271 ILGSVTSI-------------------------------------------------SFT 281
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
D + H TT E++ C+D+RVLG++D ++LLKW + + +K E E
Sbjct: 282 DPADIPIKDHDLTTEEVKSLCEDLRVLGKQDFKHLLKWRINIRKALSPAKKTEPATTAEV 341
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTK 347
E E VV DE+++ L E+EEL + R+ KR+KK +SK R K
Sbjct: 342 ENEHDVV----DEDDRLL----NEMEELTNAMDRKKKREKKILSKRRAK 382
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GY SRA++KL+Q+N KF FL+ S+ +DLCAAPGGWMQVA Q + ++ D + +K
Sbjct: 23 GYCSRASWKLVQINSKFHFLESSRSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLTPIKP 82
Query: 249 PSTTVEIQE 257
+ IQE
Sbjct: 83 IRGAIAIQE 91
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 490 INVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
I+ RP +KV EAKARKK+ R+++K++KK + + PD+SD K++ I
Sbjct: 720 IDTRPAKKVAEAKARKKRVAMRKIEKVRKKANAISDQPDISDRSKSKQI 768
>gi|156402431|ref|XP_001639594.1| predicted protein [Nematostella vectensis]
gi|156226723|gb|EDO47531.1| predicted protein [Nematostella vectensis]
Length = 529
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 83/103 (80%)
Query: 10 RIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKV 69
++ + +ELKTW+ D VL+DG+PNVG WV DA+ Q LTL ALKLA LKEGGWF+TKV
Sbjct: 17 KVLLKKELKTWQADCVLNDGAPNVGTAWVQDAFTQAELTLSALKLACENLKEGGWFITKV 76
Query: 70 FRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI 112
FRSKDY LLW+F+QLF+ VHSTKPQASR ESAEIFVVCQ +
Sbjct: 77 FRSKDYQPLLWVFQQLFKSVHSTKPQASRNESAEIFVVCQSLL 119
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V EYR + +IN RPI+K+ EAK RKK+++ +R+++ +KK E + +APDV+ EK + I+
Sbjct: 404 VEEYRARLKDINARPIKKIAEAKGRKKRKELKRVERARKKAEAVCDAPDVTAQEKMKQIQ 463
>gi|407866848|gb|EKG08418.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 910
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 137/275 (49%), Gaps = 51/275 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L A K+A+ +LK
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPS 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF +V +TKP ASR ESAEIFVVC + AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVLKQLFDKVEATKPLASRMESAEIFVVCAGFKAPKQLDPSMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYP-SDVNVLYKNLPVSKFIEHETPTVLLQ 181
+ + F ++G E K + S AL P S+V Y + H
Sbjct: 213 NAQKVFSDVGEE---------KILTPSGALVVPKSNVPTGYSEFAT---VSHHV------ 254
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A F EFL C+ P G+++ + +++ +
Sbjct: 255 ------------APFS--------EFLH--------CSDPKGFLRSHHELRFSAA----E 282
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
D+ LK + E+ C D++ +G D+R +L+W
Sbjct: 283 DKVYLKSKHSKKELVYLCGDLQQVGDADLRRMLRW 317
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKLIQLNRK++FL K +V VDLCAAPGGW QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLIQLNRKYDFLAKGRVLVDLCAAPGGWCQVAAKHMPVGSKIVGVD 77
>gi|440290047|gb|ELP83501.1| AdoMet-dependent rRNA methyltransferase spb1, putative [Entamoeba
invadens IP1]
Length = 788
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 116/184 (63%), Gaps = 4/184 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C + + +K + DVVLHDGSPN+G +W+ DAY Q L + ALK A L++G
Sbjct: 92 DITTPMCFAEMKKLMKGSQADVVLHDGSPNMGKSWIQDAYTQSELCIAALKFAVNFLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF++KVFRS+DY S+L++F++ F+ V +TKP ASR SAE+++VC+ ++AP+K D
Sbjct: 152 GWFISKVFRSQDYYSILYVFEKFFKTVTATKPPASRNTSAEVYLVCKDFLAPSKFDPNLL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ F + E+ + L + +SK GY + +++Y F++ E P L
Sbjct: 212 DPKFVFSK--EEETVIPDLFSSK--RSKPQGYDTSKSLIYNEGNAKDFLKCEEPKNWLAT 267
Query: 183 ATEV 186
T++
Sbjct: 268 HTKM 271
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKLIQ+N++++FL + V +DLCAAPGGW QVA++ M + I D E++L
Sbjct: 23 GYRARSAFKLIQMNKRYDFLGSAHVLIDLCAAPGGWCQVAQKEMPVDQRIFGVDLEAILP 82
Query: 248 HP 249
P
Sbjct: 83 IP 84
>gi|399218629|emb|CCF75516.1| unnamed protein product [Babesia microti strain RI]
Length = 1059
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 120/209 (57%), Gaps = 32/209 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + + K DV+LHDGSPN+G NW DA++Q L L A LA +L++G
Sbjct: 92 DITSQYAKHTLLKRMNGAKADVILHDGSPNMGSNWNLDAFNQNQLVLSATNLACNLLRKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G +VTKVFRS DY+SL+W+F++LF V +TKPQ+SR SAEIFV+C Y +P LD K F
Sbjct: 152 GTYVTKVFRSADYSSLIWVFQELFHIVKATKPQSSRIVSAEIFVICMRYKSPQFLDPKLF 211
Query: 123 DPKYAFKELGAE-DGKL--NALKKKQV-------EKSKALGY------------------ 154
D K+ FK G D KL ++ K K + E++K GY
Sbjct: 212 DFKHVFKNRGLNPDQKLTEDSDKSKSLSHLLKLKERNKRQGYSDGDDYREVSIIDYLKSD 271
Query: 155 -PSDVNVLYKNLPVSKFIEHETPTVLLQH 182
PSD+ V Y + +FIE ET ++ H
Sbjct: 272 NPSDILVNYNRI---RFIESETSDIIRNH 297
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+A+KLIQ+++++ + +DLCAAPGGW+QVA M +S+I
Sbjct: 22 QGYRARSAYKLIQISKRYNIFRDCNTLIDLCAAPGGWLQVASDTMPINSLI 72
>gi|242088869|ref|XP_002440267.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
gi|241945552|gb|EES18697.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
Length = 819
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 216/482 (44%), Gaps = 100/482 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + AL+LA+
Sbjct: 89 EDITTTKCRAAVRRLMDSNGVSAFDVVLHDGSPNVGGAWAQEATSQSALVIDALRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY ++++ KQ F++V +TKP ASR SAEI+++CQ Y APAK+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQFFEKVEATKPSASRSTSAEIYIICQKYKAPAKIQ 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F + + + + ++ K GY L K S F+ +
Sbjct: 209 PELLDIKHLFSVVPEQTKSRDVMDGRK--KRHRDGYEEGNTTLRKVGLASDFVWSDAQAP 266
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L EFL G + ++ N + I
Sbjct: 267 L--------------------------EFL-------------GSYNAISFDNPESLPIK 287
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
+ H TT +I+ C+D+ +L + +++LKW L + + K +
Sbjct: 288 N--------HELTTDDIKNFCEDLLLLDKNSFKHILKWRIRLRKSLSASSQVTPKV-NDA 338
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
E KV +D++ +E+EEL R KR+KK++SK R K + + M +
Sbjct: 339 VENTKVTDDDV---------LLQEMEELTSVIDRNKKREKKRLSKRRAKDKARKATGMQI 389
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPEV--------------FADSDEEHID 404
D + D ++F +S I+ QL+ + +++ V DSDEE ID
Sbjct: 390 --DATGDDYGDPDLFSISVIKGGKQLEAVESAELNVEDEIGDSENEDTQALEDSDEE-ID 446
Query: 405 IVPKKIKYNVEKSELDDSGLYYK-------------------NPDDSDLEFESSSEDEND 445
++ +Y+ + E+ D Y + NP D+D + ED+ D
Sbjct: 447 SDEEQQRYDAQLEEMLDEA-YERFVTKKGGEIKQERKRAKRINP-DADADLLEGGEDDGD 504
Query: 446 VE 447
VE
Sbjct: 505 VE 506
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ +F FL ++ +DLCAAPGGW+QVA + + +
Sbjct: 20 QGYRSRAAFKLLQLDARFRFLPTARSVLDLCAAPGGWVQVAVNHAPVGAFV 70
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R + EI+ RP +KV EAKARKK+ +++DK ++K + + + D+++ K + I
Sbjct: 681 VAAMRAQFKEIDARPSKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINERSKRKMI 739
>gi|21740261|emb|CAD39141.1| hypothetical protein [Homo sapiens]
Length = 691
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 170/340 (50%), Gaps = 79/340 (23%)
Query: 68 KVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYA 127
KVFRS+DY LLWIF+QLF+RV +TKPQASR ESAEIFVVCQ ++AP K+D+KFFDPK+A
Sbjct: 1 KVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFA 60
Query: 128 FKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVG 187
FKE+ + + L K+ K KA GY LY V+ F+ P L A+E+
Sbjct: 61 FKEVEVQAKTVTELVTKK--KPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEI- 117
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
DDE + +
Sbjct: 118 ---------------------------------------------------MVDDEELAQ 126
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE------------- 294
HP+TT +I+ CC+DIRVLGRK++R+LL W L +K KE+ K
Sbjct: 127 HPATTEDIRVCCQDIRVLGRKELRSLLNWRTKLRRYVAKKLKEQAKALDISLSSGEEDEG 186
Query: 295 ------GGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKL 348
G ++ K +EEE+E + + + E+K +E ELKRKKKK+ +E+ K
Sbjct: 187 DEEDSTAGTTKQPSK-----EEEEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQ 241
Query: 349 QEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLIT 388
+E++ LKM L G + + + MF L IR L+ +T
Sbjct: 242 RERVELKMDLPG-VSIADEGETGMFSLCTIRGHQLLEEVT 280
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNIR 539
V YRK+ EIN RPI+KV EAKARKK+R +R+++ +KK E ++ D+S+ EK +R
Sbjct: 568 VEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLR 627
Query: 540 A 540
+
Sbjct: 628 S 628
>gi|302758118|ref|XP_002962482.1| hypothetical protein SELMODRAFT_141188 [Selaginella moellendorffii]
gi|302758956|ref|XP_002962901.1| hypothetical protein SELMODRAFT_78506 [Selaginella moellendorffii]
gi|300169343|gb|EFJ35945.1| hypothetical protein SELMODRAFT_141188 [Selaginella moellendorffii]
gi|300169762|gb|EFJ36364.1| hypothetical protein SELMODRAFT_78506 [Selaginella moellendorffii]
Length = 830
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 143/296 (48%), Gaps = 53/296 (17%)
Query: 3 DITTDKCRIAITREL---KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DITT KC I + L VDVVLHDGSPNVG W +A Q L L +LKLA+ L
Sbjct: 91 DITTPKCASDIGKILDQNGLRMVDVVLHDGSPNVGGAWAKEAMTQSSLVLDSLKLATKFL 150
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
G FVTKVFRS+DY +L + F+QLF +V TKP ASR SAEI+VV Y+AP K+D
Sbjct: 151 APKGTFVTKVFRSQDYNALKYAFEQLFAKVEVTKPIASRSTSAEIYVVGLKYLAPVKIDP 210
Query: 120 KFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+ DP++ F+E+ ++ L+ + ++ + GY K+ + F+ E P L
Sbjct: 211 RNLDPRFLFEEIPQPPKVIDVLRSSKQKRHRE-GYDDANTTFRKDCTAADFVWSEKPLEL 269
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L T + FE D ++P
Sbjct: 270 LGSITSIS-----------------FE---------DPKSSP------------------ 285
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
+ H TT EI+ C+D+RVLG+K+ + LLKW + ++ EE EG
Sbjct: 286 -----IKDHAETTDEIKALCEDLRVLGKKEFKQLLKWCLHVRKALSKTSASEETEG 336
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 10/102 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QL+RK+ FL + +DLCAAPGGWMQVA + M S++ D ++
Sbjct: 21 QGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQVAVEKMPVRSVVIGVDLVPIR 80
Query: 248 HPSTTVEIQ------ECCKDI-RVLGRKDVRNLLKWWKVLHD 282
+ +Q +C DI ++L + +R + VLHD
Sbjct: 81 PVRGALSLQGDITTPKCASDIGKILDQNGLRMVD---VVLHD 119
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
V R + I+ RP++KV EAKARKK+R ++M++ + + + + PD+S+ K R
Sbjct: 675 VQAMRAQFRAIDARPVKKVAEAKARKKRRVMKKMEQARSRAAAIADQPDISNKSKNR 731
>gi|118369700|ref|XP_001018053.1| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|89299820|gb|EAR97808.1| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 947
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 150/290 (51%), Gaps = 59/290 (20%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
++DIT + RELK K DVVL+DG+PNVG NW DA++Q LTL ALKLA L+
Sbjct: 90 VQDITAPVTYQLLKRELKGGKADVVLNDGAPNVGANWQKDAFNQIELTLAALKLAVNFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GG FVTKVFRSKDY +L+W+ + F+++ + KP+ASR SAEIF+VC +I P +D K
Sbjct: 150 RGGTFVTKVFRSKDYNALIWVCNKFFRKIEANKPKASRFTSAEIFIVCTDFIDPDFIDDK 209
Query: 121 FFDPKYAFKELGAE------DGKLNALKKKQVEKSKALGYPSDV-NVLYKNLPVSKFIEH 173
FD KY FK+ + + ++N++ K ++ K +GY DV +++ + +F+
Sbjct: 210 LFDAKYIFKDTEDDYYTQQVEHEVNSIDKIMAKRRKRVGYGDDVKQTVFQPITFEEFVNI 269
Query: 174 ETP-TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+ P V L H + +F QL + + + P W
Sbjct: 270 DNPFAVFLTHNS---------ISFPKDQLEK----------YIPMTDPPKDW-------- 302
Query: 233 MASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWW-KVLH 281
EI C+DI V+G++++ L+KW K+LH
Sbjct: 303 ---------------------EI--ICEDILVIGKREIAQLIKWRNKILH 329
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 35/40 (87%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRA FKLIQ+N+K+ FL+K+ +DLCAAPGGW+QVA
Sbjct: 23 GYRSRACFKLIQINKKYGFLEKANAVIDLCAAPGGWLQVA 62
>gi|237840609|ref|XP_002369602.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
gi|211967266|gb|EEB02462.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
Length = 981
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +C + + +K +VD+VLHDGSPN+G +W DA+ Q L L A KLA +L G
Sbjct: 98 DITTPQCAAKLRKLVKFGEVDLVLHDGSPNMGTDWSVDAFSQNVLVLCAAKLACQLLAAG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
FV+KVFRS DY +LL++ + LF+RV +TKPQASR SAEIFVVC+ + P LD + F
Sbjct: 158 ATFVSKVFRSADYAALLYVLQTLFERVDATKPQASRAVSAEIFVVCRGFRKPPVLDERLF 217
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKS 149
DPK+ F + G++DG A +K V +S
Sbjct: 218 DPKHVFLQ-GSDDGDAPAAAQKAVRRS 243
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQV-AKQNMMASSIIHFD 241
+GYR+R+AFKL+QL+++F +KS VDLCAAPGGW+QV AK +A++I+ D
Sbjct: 27 QGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAAKHCPVATTIVGVD 82
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+ EYR+K ++I+ RPIRKV EA+ARKK R+ RR+ K+K ++ + E+ + ++A KAR I
Sbjct: 843 LMREYRQKLLDISRRPIRKVREARARKKMREQRRLQKVKSQVAAVAESTEFTEASKARAI 902
>gi|221503392|gb|EEE29090.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii VEG]
Length = 981
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +C + + +K +VD+VLHDGSPN+G +W DA+ Q L L A KLA +L G
Sbjct: 98 DITTPQCAAKLRKLVKFGEVDLVLHDGSPNMGTDWSVDAFSQNVLVLCAAKLACQLLAAG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
FV+KVFRS DY +LL++ + LF+RV +TKPQASR SAEIFVVC+ + P LD + F
Sbjct: 158 ATFVSKVFRSADYAALLYVLQTLFERVDATKPQASRAVSAEIFVVCRGFRKPPVLDERLF 217
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKS 149
DPK+ F + G++DG A +K V +S
Sbjct: 218 DPKHVFLQ-GSDDGDAPAAAQKAVRRS 243
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQV-AKQNMMASSIIHFD 241
+GYR+R+AFKL+QL+++F +KS VDLCAAPGGW+QV AK +A++I+ D
Sbjct: 27 QGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAAKHCPVATTIVGVD 82
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+ EYR+K ++I+ RPIRKV EA+ARKK R+ RR+ K+K ++ + E+ + ++A KAR I
Sbjct: 843 LMREYRQKLLDISRRPIRKVREARARKKMREQRRLQKVKSQVAAVAESTEFTEASKARAI 902
>gi|95007320|emb|CAJ20540.1| methyltransferase, putative [Toxoplasma gondii RH]
gi|221482814|gb|EEE21145.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii GT1]
Length = 981
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +C + + +K +VD+VLHDGSPN+G +W DA+ Q L L A KLA +L G
Sbjct: 98 DITTPQCAAKLRKLVKFGEVDLVLHDGSPNMGTDWSVDAFSQNVLVLCAAKLACQLLAAG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
FV+KVFRS DY +LL++ + LF+RV +TKPQASR SAEIFVVC+ + P LD + F
Sbjct: 158 ATFVSKVFRSADYAALLYVLQTLFERVDATKPQASRAVSAEIFVVCRGFRKPPVLDERLF 217
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKS 149
DPK+ F + G++DG A +K V +S
Sbjct: 218 DPKHVFLQ-GSDDGDAPAAAQKAVRRS 243
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQV-AKQNMMASSIIHFD 241
+GYR+R+AFKL+QL+++F +KS VDLCAAPGGW+QV AK +A++I+ D
Sbjct: 27 QGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAAKHCPVATTIVGVD 82
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+ EYR+K ++I+ RPIRKV EA+ARKK R+ RR+ K+K ++ + E+ + ++A KAR I
Sbjct: 843 LMREYRQKLLDISRRPIRKVREARARKKMREQRRLQKVKSQVAAVAESTEFTEASKARAI 902
>gi|255543715|ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223547931|gb|EEF49423.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
Length = 828
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 63/392 (16%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +C+ + + + V D+VLHDGSPN+G W +A Q L + A++LA+
Sbjct: 89 QDITKPECKARVKKIMGEHGVKAFDLVLHDGSPNIGGAWAQEAMSQNALVIDAVRLATQF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY S+++ QLF++V KP ASR SAEIFV+ Y APAK+D
Sbjct: 149 LAPKGTFVTKVFRSQDYNSVIYCLNQLFEKVEVDKPAASRSASAEIFVLGLKYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ K+ + + +K GY +++ K + F+ +TP
Sbjct: 209 PRLLDVKHLFQGSVEPQRKVIDVLRGSKQKRHRDGYEDGESIIRKVSSAADFVWSDTPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T + FE D + P
Sbjct: 269 ILGSVTSIA-----------------FE---------DPASLP----------------- 285
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEG 298
+ H TT E++ C D+RVLG++D ++LLKW +H K ++
Sbjct: 286 ------LRDHALTTEEVKALCDDLRVLGKQDFKHLLKWR--MHIRKALSPSQKATSTTST 337
Query: 299 EEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLL 358
+ EEK VEDE D+ E+ + T +E K + + KR K+ +K++ + + + + L
Sbjct: 338 DGEEKNVEDEDDKLLNEMEELTYAVERKKKQAK---KRDAKRRAKDKARKTKGVQIDALE 394
Query: 359 KGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
G + D E+F LS I+ L + ++
Sbjct: 395 DGYV------DHELFSLSSIKGKKDLVAVNSA 420
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRA++KL+QL+ KF+FL S+ +DLCAAPGGWMQVA Q + S++
Sbjct: 21 GYRSRASWKLVQLDSKFQFLHSSRAVLDLCAAPGGWMQVAVQRVPVGSLV 70
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EIN RP +KV EAKARKK+ +R++K++KK T+ + ++SD K + I
Sbjct: 692 EINARPAKKVAEAKARKKRIAMKRLEKVRKKANTISDQAEISDRSKRKMI 741
>gi|71400687|ref|XP_803129.1| FtsJ cell division protein [Trypanosoma cruzi strain CL Brener]
gi|70865797|gb|EAN81683.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 651
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 137/275 (49%), Gaps = 51/275 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I K VD V+HDG+PNVG W D + Q L L A K+A+ +LK
Sbjct: 93 DITDDKTRKMIVTYFKKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPS 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF +V +TKP ASR ESAEIFVVC + AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVLKQLFDKVEATKPLASRMESAEIFVVCAGFKAPKQLDPSMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYP-SDVNVLYKNLPVSKFIEHETPTVLLQ 181
+ + F ++G E K + S AL P S+V Y + H
Sbjct: 213 NAQKVFSDVGEE---------KILTPSGALVVPKSNVPTGYSEFAT---VSHHV------ 254
Query: 182 HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
A+F EFL C+ P G+++ + +++ +
Sbjct: 255 ------------ASFS--------EFLH--------CSDPKGFLRSHHELRFSAA----E 282
Query: 242 DESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
D+ LK + E+ C D++ +G D+R +L+W
Sbjct: 283 DKVYLKSKHSKKELVYLCGDLQQVGDADLRRMLRW 317
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKLIQLNRK++FL KS+V VDLCAAPGGW QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAKHMPVGSKIVGVD 77
>gi|67480103|ref|XP_655413.1| ribosomal RNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56472547|gb|EAL50027.1| ribosomal RNA methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449703792|gb|EMD44172.1| ribosomal RNA methyltransferase [Entamoeba histolytica KU27]
Length = 829
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C + + +K DVVLHDGSPN+G +W+ DAY Q L + ALK A LK+G
Sbjct: 92 DITTGMCFAEMKKLMKGEHADVVLHDGSPNMGKSWIQDAYTQSELCIAALKFAVTFLKKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF++KVFRS+DY ++L++F++ F+ V +TKP ASR SAE+++VC+ ++AP+K D
Sbjct: 152 GWFISKVFRSQDYYAILFVFEKFFKSVIATKPPASRNTSAEVYLVCKDFLAPSKYDPNLL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ F A++ + ++ K GY + ++Y +F++ E P L
Sbjct: 212 DPKFVF----AKEEETQVPDLFSTKRPKPQGYDTSKALVYNVGNAKEFLQAEDPKAWLAT 267
Query: 183 ATEV 186
T +
Sbjct: 268 HTAI 271
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKL+Q+N++++FL + + +DLCAAPGGW QVA + M + S I D E +L
Sbjct: 23 GYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMPVESKIFGVDLEPILP 82
Query: 248 HPSTTVEIQE-----CCKDIRVLGRKDVRNLLKWWKVLHD 282
P T + + C +++ L + + ++ VLHD
Sbjct: 83 IPRCTTYVGDITTGMCFAEMKKLMKGEHADV-----VLHD 117
>gi|159477739|ref|XP_001696966.1| hypothetical protein CHLREDRAFT_105410 [Chlamydomonas reinhardtii]
gi|158274878|gb|EDP00658.1| predicted protein [Chlamydomonas reinhardtii]
Length = 328
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
++DITT +CR AI RE K+DVVLHDG+PNVG W +AY+Q L L +L+LA L
Sbjct: 89 VQDITTQQCRTAIKREAGGAKMDVVLHDGAPNVGGAWASEAYNQSSLVLDSLRLAVETLA 148
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G FVTK+FRSKDY +LL+ F QLF +V +TKP ASR SAEIFVVC + APAK+D +
Sbjct: 149 PKGTFVTKIFRSKDYNALLYAFNQLFDKVEATKPAASRNTSAEIFVVCLGFKAPAKIDPR 208
Query: 121 FFDPKYAF-KELGAEDGKLNALKKKQVEKSKAL-GYPSDVNVLYKNLPVSKFIEHETPTV 178
D K F K +G E AL ++++++ + GY + + F+ + P
Sbjct: 209 LLDSKILFQKVMGPE-----ALLRQKIKQRRFREGYDEGFSTSQRITSALAFLVSDGPVE 263
Query: 179 LLQHAT-EVGKGYRSRAA 195
+L + T E+ RS AA
Sbjct: 264 MLGNFTEELAAKIRSHAA 281
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRAAFKLIQLNRK+ FL K + +DLCAAPGGW+QVA + M S+I D + +K
Sbjct: 21 QGFRSRAAFKLIQLNRKYNFLGKCRTLLDLCAAPGGWLQVAAKTMPVGSLILGVDLAPIK 80
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLH-DEKTEKEKEEE 292
H +TT EI+ CKD++VLGR + + LL+W L D K + EEE
Sbjct: 279 HAATTAEIRTLCKDLQVLGRSEFKQLLRWRLALRKDLKADLATEEE 324
>gi|407041022|gb|EKE40480.1| ribosomal RNA large subunit methyltransferase J protein [Entamoeba
nuttalli P19]
Length = 829
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C + + +K DVVLHDGSPN+G +W+ DAY Q L + ALK A LK+G
Sbjct: 92 DITTGMCFAEMKKLMKGEHADVVLHDGSPNMGKSWIQDAYTQSELCIAALKFAVTFLKKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF++KVFRS+DY ++L++F++ F+ V +TKP ASR SAE+++VC+ ++AP+K D
Sbjct: 152 GWFISKVFRSQDYYAILFVFEKFFKSVIATKPPASRNTSAEVYLVCKDFLAPSKYDPNLL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ F A++ + ++ K GY + ++Y +F++ E P L
Sbjct: 212 DPKFVF----AKEEETQVPDLFSTKRPKPQGYDTSKALVYNVGNAKEFLQAEDPKAWLAT 267
Query: 183 ATEV 186
T +
Sbjct: 268 HTAI 271
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKL+Q+N++++FL + + +DLCAAPGGW QVA + M + S I D E +L
Sbjct: 23 GYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMPVESKIFGVDLEPILP 82
Query: 248 HPSTTVEIQE-----CCKDIRVLGRKDVRNLLKWWKVLHD 282
P T + + C +++ L + + ++ VLHD
Sbjct: 83 IPRCTTYVGDITTGMCFAEMKKLMKGEHADV-----VLHD 117
>gi|452825505|gb|EME32501.1| FtsJ-like methyltransferase family protein [Galdieria sulphuraria]
Length = 735
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 159/326 (48%), Gaps = 54/326 (16%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + C AI + L+ + DV+L DGSP++G W+ DAY Q LTL AL+L+ +L
Sbjct: 91 DITKESCIGAIRKALEGTRPDVILCDGSPSMGTAWLQDAYTQSELTLAALRLSVSLLSPN 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV KVFRS +YTSLL++ QLF +V STKPQASR ESAEI+V+C + K+D K
Sbjct: 151 GSFVAKVFRSSEYTSLLYVMNQLFGKVFSTKPQASRAESAEIYVICTKFKDMKKIDQKLL 210
Query: 123 DPKYAFKELG--AEDGKLNALKKKQVEKSKALGYPSDVNV-LYKNLPVSKFIEHETPTVL 179
DP+ FKE ++ K N L +K LGY + L++ V FI+ P +
Sbjct: 211 DPRTVFKEQDEQSKTKKSNRLIFPHQKKRNRLGYDEENGTNLFRKCSVLDFIKSSQPIHI 270
Query: 180 LQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
L + + G +A + + S I
Sbjct: 271 LNNTHVLEFGEEGQAQY------------------------------------IKSLAI- 293
Query: 240 FDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVL---HDEKTEKEKEEEKEGG 296
T+ ++ E CKD++VLG KD R LL W K + D+ + +E +E
Sbjct: 294 -----------TSADVLENCKDLQVLGPKDQRRLLHWRKAVLKELDKNKKSPEESNEEEN 342
Query: 297 EGEEEEKVVEDEMDEEEKELMKATKE 322
+E+ V + D E+K++ K K+
Sbjct: 343 LPRDEDSTVSSDFDIEKKQISKQEKD 368
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA-KQNMMASSIIHFDDESVL 246
+GYRSRAAFKLIQLNRK++ L ++ VDLCAAPGGW+QVA K+ +A + D +
Sbjct: 21 QGYRSRAAFKLIQLNRKYDLLGSARAVVDLCAAPGGWLQVARKETPIACVCVGVDIVPIR 80
Query: 247 KHPSTTVEIQECCKD 261
P TT + K+
Sbjct: 81 PIPGTTCLTHDITKE 95
>gi|402579651|gb|EJW73603.1| hypothetical protein WUBG_15490, partial [Wuchereria bancrofti]
Length = 220
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D VLHDG+PNVG NWV DA+ Q CLTL AL+LA+ IL + G FVTK+FRS DY L+
Sbjct: 26 KADCVLHDGAPNVGRNWVQDAFQQNCLTLSALRLATQILTKNGIFVTKIFRSSDYCHLIS 85
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKLNA 140
+F++LF++VH KP ASR ESAEIFVVC+ Y PAKL+ DPK F E + LN
Sbjct: 86 VFEKLFKQVHVWKPAASRLESAEIFVVCEKYQKPAKLNPDLLDPKKVFAESTQQSVTLNP 145
Query: 141 ----LKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVG 187
+ +++K A GY ++ L+K + + FI LL A ++
Sbjct: 146 QLMLQPRAKLKKVPATGYENESVSLHKTINATDFIHSNNYLELLASAYKIA 196
>gi|167388553|ref|XP_001738607.1| ribosomal RNA methyltransferase [Entamoeba dispar SAW760]
gi|165898080|gb|EDR25052.1| ribosomal RNA methyltransferase, putative [Entamoeba dispar SAW760]
Length = 829
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C + + +K DVVLHDGSPN+G +W+ DAY Q L + ALK A LK+G
Sbjct: 92 DITTGMCFAEMKKLMKGEHADVVLHDGSPNMGKSWIQDAYTQSELCIAALKFAVTFLKKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWF++KVFRS+DY ++L++F++ F+ V +TKP ASR SAE+++VC+ ++AP+K D
Sbjct: 152 GWFISKVFRSQDYYAILFVFEKFFKSVIATKPPASRNTSAEVYLVCKDFLAPSKYDPNLL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DPK+ F A++ + ++ K GY + ++Y +F++ E P L
Sbjct: 212 DPKFVF----AKEEETQVPDLFSTKRPKPQGYDTSKALVYNIGNAKEFLQAEDPKAWLAT 267
Query: 183 ATEV 186
T +
Sbjct: 268 HTAI 271
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 11/100 (11%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKL+Q+N++++FL + + +DLCAAPGGW QVA + M + S I D E +L
Sbjct: 23 GYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMPVESKIFGVDLEPILP 82
Query: 248 HPSTTVEIQE-----CCKDIRVLGRKDVRNLLKWWKVLHD 282
P T + + C +++ L + + ++ VLHD
Sbjct: 83 IPRCTTYVGDITTGMCFAEMKKLMKGEHADV-----VLHD 117
>gi|226466768|emb|CAX69519.1| hypothetical protein [Schistosoma japonicum]
Length = 260
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 89/131 (67%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITTDKC+ + EL K DVVLHDG+PNVG W D Y Q L+L + +A+ L+
Sbjct: 90 IADITTDKCKQILRNELNESKADVVLHDGAPNVGAAWSIDEYSQAVLSLNSFAIATEFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GGWFVTKVFRS+DY W+ Q F+ V + KP+ASR ESAEIF+V Q Y+AP ++D K
Sbjct: 150 RGGWFVTKVFRSRDYEPFKWVLSQFFRTVRAIKPEASRLESAEIFIVGQFYLAPERIDPK 209
Query: 121 FFDPKYAFKEL 131
F D ++ F E+
Sbjct: 210 FLDARHVFGEI 220
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
G+RSRAAFKLIQLNR+F+FL SKV +DLCAAPGGW+QVA + M +AS II D +
Sbjct: 23 GFRSRAAFKLIQLNRRFKFLNSSKVLIDLCAAPGGWLQVAAKEMPIASQIIGVDLVPIHP 82
Query: 248 HPSTTVEIQECCKD 261
P I + D
Sbjct: 83 IPKVKTFIADITTD 96
>gi|84043710|ref|XP_951645.1| cell division protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348588|gb|AAQ15913.1| FtsJ cell division protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62359748|gb|AAX80179.1| FtsJ cell division protein, putative [Trypanosoma brucei]
Length = 905
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 143/288 (49%), Gaps = 49/288 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +K + I LK VD V+HDG+PNVG W D + Q L L A KLAS +L+ G
Sbjct: 93 DITEEKTKKIIMTYLKREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKLASKLLRPG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF +V +TKP ASR ESAEIFV C Y AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVMKQLFDKVEATKPLASRMESAEIFVTCAGYKAPKQLDPAMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
+P+ F + VE+ K L + V N+P +E + QH
Sbjct: 213 NPQKVFSD---------------VEEEKILTPSGALVVPRSNVPAG----YEEFATVQQH 253
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
A+F EF+ S P +++ + + ++
Sbjct: 254 V----------ASFS--------EFMSSSD--------PKAFLRSHHELRFTTP----EE 283
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKE 290
++ LK + E+ C D++ +G D+R L++W + L E+ + K+
Sbjct: 284 KAFLKSKHSKKELVYLCGDLQQVGDADLRRLVRWREQLLREQARELKQ 331
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKL+QLNRK++FL K +V VDLCAAPG W QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLVQLNRKYDFLSKCRVLVDLCAAPGSWCQVAAKHMPVGSKIVGVD 77
>gi|261326555|emb|CBH09516.1| FtsJ cell division protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 905
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 143/288 (49%), Gaps = 49/288 (17%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +K + I LK VD V+HDG+PNVG W D + Q L L A KLAS +L+ G
Sbjct: 93 DITEEKTKKIIMTYLKREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKLASKLLRPG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
GWFVTKVFRS+D+ L+W+ KQLF +V +TKP ASR ESAEIFV C Y AP +LD F
Sbjct: 153 GWFVTKVFRSQDFHKLMWVMKQLFDKVEATKPLASRMESAEIFVTCAGYKAPKQLDPAMF 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
+P+ F + VE+ K L + V N+P +E + QH
Sbjct: 213 NPQKVFSD---------------VEEEKILTPSGALVVPRSNVPAG----YEEFATVQQH 253
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
A+F EF+ S P +++ + + ++
Sbjct: 254 V----------ASFS--------EFMSSSD--------PKAFLRSHHELRFTTP----EE 283
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKE 290
++ LK + E+ C D++ +G D+R L++W + L E+ + K+
Sbjct: 284 KAFLKSKHSKKELVYLCGDLQQVGDADLRRLVRWREQLLREQARELKQ 331
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKL+QLNRK++FL K +V VDLCAAPG W QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLVQLNRKYDFLSKCRVLVDLCAAPGSWCQVAAKHMPVGSKIVGVD 77
>gi|102139739|gb|ABF69946.1| FtsJ-like methyltransferase family protein [Musa acuminata]
Length = 847
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 187/397 (47%), Gaps = 66/397 (16%)
Query: 1 MEDITTDKCRIAITRELKT---WKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASG 57
+EDITT +CR AI R + + DVVLHDGSPNVG W +A Q L + +++LA+
Sbjct: 88 VEDITTPRCRAAIKRLMDSNGCSAFDVVLHDGSPNVGGAWAQEATSQSSLVVDSVRLATN 147
Query: 58 ILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
L G FVTKVFRS+DY+++++ KQLF++V TKP ASR SAEI+V+ Y APAK+
Sbjct: 148 FLAPKGTFVTKVFRSQDYSAIIYCLKQLFEKVEVTKPVASRSTSAEIYVIGLRYKAPAKI 207
Query: 118 DTKFFDPKYAFKELGA-EDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETP 176
D + D K+ F+ GA E K+ + + +K GY L+K VS F+ E P
Sbjct: 208 DPRLLDMKHLFQ--GAIEHPKVVDVLRGSKQKRNREGYEEGNTTLWKVGLVSDFVWSEAP 265
Query: 177 TVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
EFL + +
Sbjct: 266 ----------------------------LEFLG------------------------SVN 273
Query: 237 IIHFDDESVLK---HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEK 293
+ FDD + L H TT E++ C+D+ VL + ++LLKW + +K K
Sbjct: 274 ALSFDDPACLPIRDHEFTTDEVKSLCEDLYVLDKSSFKHLLKWRMHIKKALASADKAVPK 333
Query: 294 EGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMN 353
E+ KV + E D + + E+EEL R+ K+ KK +SK R K EK
Sbjct: 334 ---VDEDAPKVDDAEDDTKGNDDDSLLNEMEELAHLLDRKKKKAKKLLSKRRAK--EKAR 388
Query: 354 LKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
M ++ D D ++F LS I+ +L I ++
Sbjct: 389 RAMGMQIDATEDSYFDRDLFSLSAIKGKKELSAIDSA 425
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ K+ FL ++ +DLCAAPGGW+QVA ++ S +
Sbjct: 20 QGYRSRAAFKLLQLDAKYRFLPSARSILDLCAAPGGWLQVAVRHAPVGSFV 70
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A++ ++R EI+ RP +KV EAKARKK+ R+++K+++K T+ + D+S+ K +
Sbjct: 695 AAMKAQFR----EIDARPAKKVAEAKARKKRAAMRKLEKVRQKANTIADQTDISERSKGK 750
Query: 537 NI 538
I
Sbjct: 751 MI 752
>gi|302758756|ref|XP_002962801.1| hypothetical protein SELMODRAFT_404107 [Selaginella moellendorffii]
gi|300169662|gb|EFJ36264.1| hypothetical protein SELMODRAFT_404107 [Selaginella moellendorffii]
Length = 814
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 142/300 (47%), Gaps = 58/300 (19%)
Query: 3 DITTDKCRIAITREL---KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DITT KC I + L VDVVLHDGSPNVG W +A Q L L +LKLA+ L
Sbjct: 91 DITTPKCASDIGKILDQNGLRMVDVVLHDGSPNVGGAWAKEAMTQSSLVLDSLKLATKFL 150
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
G FVTKVFRS+DY +L + F+QLF +V TKP ASR SAEI+VV Y+AP K+D
Sbjct: 151 APKGTFVTKVFRSQDYNALKYAFEQLFAKVEVTKPIASRSTSAEIYVVGLKYLAPVKIDP 210
Query: 120 KFFDPKYAFKELGAED----GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHET 175
+ DP++ F+E+ G +N K ++ SK Y K+ + F+ E
Sbjct: 211 RNLDPRFLFEEIPQPPKVGFGIVN--KVLALKPSKLCRYDDANTTFRKDCTAADFVWSEK 268
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
P LL T + FE D ++P
Sbjct: 269 PLELLGSITSIS-----------------FE---------DPKSSP-------------- 288
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
+ H TT EI+ C+D+RVLG+K+ + LLKW + ++ EE EG
Sbjct: 289 ---------IKDHAETTDEIKALCEDLRVLGKKEFKQLLKWCLHVRKALSKTSASEETEG 339
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 10/102 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QL+RK+ FL + +DLCAAPGGWMQVA + M S+I D ++
Sbjct: 21 QGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQVAVEKMPVRSVIIGVDLVPIR 80
Query: 248 HPSTTVEIQ------ECCKDI-RVLGRKDVRNLLKWWKVLHD 282
+ +Q +C DI ++L + +R + VLHD
Sbjct: 81 PVRGALSLQGDITTPKCASDIGKILDQNGLRMVD---VVLHD 119
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 486 KRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
KR RP++KV EAKARKK+R ++M++ + K + + PD+S+ K R
Sbjct: 665 KRHSPRKRPVKKVAEAKARKKRRVMKKMEQARSKAAAIADQPDISNKSKNR 715
>gi|225428430|ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis
vinifera]
Length = 842
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 71/395 (17%)
Query: 2 EDITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT C+ + + + + D+VLHDGSPN+G W +A Q L + AL+LA+
Sbjct: 89 EDITKPACKARVKKLMSEYGCAAFDIVLHDGSPNIGGAWTQEATAQNALVIDALRLATQF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY S+L+ KQLF++V KP ASR SAEIFV+ Y APAK+D
Sbjct: 149 LAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVEVDKPAASRSTSAEIFVLGLKYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ E K+ + + +K GY L K + FI +TP
Sbjct: 209 PRLLDVKHLFQGT-IEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSSATNFIWSDTPLE 267
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 268 ILGSVTSIS--------------------------------------------------- 276
Query: 239 HFDDESVLK---HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
FDD + L H TT E++ C D+RVLG++D ++LLKW +H K ++
Sbjct: 277 -FDDPASLPIKDHALTTEEVKTLCDDLRVLGKQDFKHLLKWR--MHVRKALSPVQKATST 333
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
++ EKVV DE+E+ L + + ++ +++R K K+ +K++ + M +
Sbjct: 334 AAEDDHEKVV----DEDERMLNEMEELTYAMERKKKRTKKLLAKRQAKDKARKVTGMQVD 389
Query: 356 MLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
L +G D E+F LS I+ L + ++
Sbjct: 390 ALEEG------YTDHELFSLSSIKAKKDLLAVNST 418
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAA+KL+QL+ K+ FL+ S+ +DLCAAPGGWMQ A + + S I D + +
Sbjct: 21 GYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAAVERVPVGSFILGVDLNPIAP 80
Query: 249 PSTTVEIQE 257
+ I+E
Sbjct: 81 VRGAISIEE 89
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EI+ RP +KV EAKARKK+ R+++K++KK T+ + D+SD K R I
Sbjct: 697 EIDARPAKKVAEAKARKKRAAMRKLEKVRKKANTISDQTDISDRSKGRLI 746
>gi|449016958|dbj|BAM80360.1| probable rRNA methyltransferase pmt2 [Cyanidioschyzon merolae
strain 10D]
Length = 848
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 122/218 (55%), Gaps = 38/218 (17%)
Query: 1 MEDITTDKCRIAITRELKTWK---------------VDVVLHDGSPNVGMNWVYDAYHQC 45
+ DIT++KC I L ++ VDVVL D SPN+G W+ DAY+Q
Sbjct: 91 VADITSEKCVRLIRNALTSFGEVLDPSGRVATGDLGVDVVLSDASPNMGTAWLQDAYNQV 150
Query: 46 CLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIF 105
LTL AL++AS +L+ GGWFV+K+FRS D + L + ++LFQRV+ TKP ASR++SAEI+
Sbjct: 151 ELTLHALRIASTLLQRGGWFVSKLFRSADSEAFLLVARRLFQRVYVTKPPASRQQSAEIY 210
Query: 106 VVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKL-------NALKKKQVE----------- 147
VVC+ Y+APA+L+ FDP+ F+E + + +A +++Q++
Sbjct: 211 VVCKSYLAPARLEANLFDPRQVFRESTSHANAVADVASPDDARQRQQLQSKDRKFRRQLL 270
Query: 148 KSKALGYPSDVNVL-----YKNLPVSKFIEHETPTVLL 180
+ P DV + Y+ + F+E P ++L
Sbjct: 271 SGRRSAVPDDVEAINGTTKYRTCSLRTFLESSFPGIVL 308
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQK-SKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
GYRSRAAFKL+QLNR+ FL + S+ VDLCAAPGGWMQV +Q+M +A+ I D
Sbjct: 23 GYRSRAAFKLLQLNRRHGFLGRASRGVVDLCAAPGGWMQVCRQHMPVAAPCIGVD 77
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 42/218 (19%)
Query: 253 VEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEE 312
EI+ CKD+ V G KD R L K+W+ EK +K+ G E V E+ M +
Sbjct: 332 AEIRALCKDLGVCGPKDFRRLFKFWETSRRVLFCAEK-SQKQAGSTVPESGVSEEPMVDR 390
Query: 313 EKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEE- 371
A+ + E KR + K ++ER + E+ + L N DE+
Sbjct: 391 S----AASSTMASTTGRE----KRLEAKAARERARKLERQRQR---GAHLDANANVDEDT 439
Query: 372 ----MFKLSQIRTTDQLDLITASKPEVFADSDEEHIDIVPKKIKYNVEKSELDDSGLYYK 427
+F L + R Q EE VE S L+ S L +
Sbjct: 440 GFSNLFSLREARAAMQTGYF------------EE------------VETSALESSALDSE 475
Query: 428 NPDDSDLEFESSSEDENDVEKKLVEEEFDTDEEDGLGK 465
D +D ES S+ + V+++ + ++DG G+
Sbjct: 476 Q-DGADASEESGSDAAGAHSESFVDDQTMSSDDDGHGQ 512
>gi|390370413|ref|XP_003731817.1| PREDICTED: putative rRNA methyltransferase 3-like, partial
[Strongylocentrotus purpuratus]
Length = 144
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 99/143 (69%), Gaps = 4/143 (2%)
Query: 47 LTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFV 106
LTL ALKLA L +GGWF+TKVFRSKDY LLW+F Q+F++VH TKPQASR ESAEIFV
Sbjct: 2 LTLHALKLAVEFLNKGGWFITKVFRSKDYQPLLWVFHQMFRKVHVTKPQASRNESAEIFV 61
Query: 107 VCQHYIAPAKLDTKFFDPKYAFKELGAEDG---KLNALK-KKQVEKSKALGYPSDVNVLY 162
VCQ +I+P K+D KFFDPKY FKE+ E+ K L+ +V+K+KA GY LY
Sbjct: 62 VCQGFISPDKIDPKFFDPKYIFKEVVGEETTKQKATILRDPSKVKKAKAEGYAEGDYTLY 121
Query: 163 KNLPVSKFIEHETPTVLLQHATE 185
+ VSK++ E LL + +E
Sbjct: 122 HPVQVSKYMASEDALELLNNCSE 144
>gi|323456843|gb|EGB12709.1| hypothetical protein AURANDRAFT_52052 [Aureococcus anophagefferens]
Length = 947
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 133/264 (50%), Gaps = 61/264 (23%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI---LKEGGWFVTKVFRSKDYTSL 78
VDVVL DG+PNVG + DA+ Q + L ALK G+ L+ GG FVTKV+R +DY +L
Sbjct: 129 VDVVLCDGAPNVGAAYNKDAFVQNEIALLALKC--GVECGLRRGGSFVTKVYRGQDYNAL 186
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGA--EDG 136
W F +LF+RV +TKP +SR +SAEIFVVC Y+AP K+D K DPK+ F ELG +D
Sbjct: 187 TWAFGRLFERVRATKPASSRAQSAEIFVVCSGYLAPQKVDPKLLDPKHVFGELGGGLDDA 246
Query: 137 KLNALKKKQVEKSK--ALGYP-SDVNVL-YKNLPVSKFIEHETPTVLLQHATEVGKGYRS 192
K + Q K K GY +D +L + +F+ H P +L
Sbjct: 247 KPLGVLHPQAGKKKRQRQGYADNDSGLLVMPTMTALQFLRHADPAQILA----------- 295
Query: 193 RAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTT 252
++S + D AP ++V +H +TT
Sbjct: 296 ----------------ERSAIVFD--GAP---------------------DAVCQHKATT 316
Query: 253 VEIQECCKDIRVLGRKDVRNLLKW 276
E++ C +D++VL + D R LLKW
Sbjct: 317 AEVRACGEDLKVLSKGDFRVLLKW 340
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 188 KGYRSRAAFKLIQLNRKFEFL-QKSKVCVDLCAAPGGWMQV 227
+GYRSRAAFKL +N++F+ + K++V +DLCAAPGGW QV
Sbjct: 24 QGYRSRAAFKLAHINKEFDIIGAKTRVVLDLCAAPGGWAQV 64
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 478 SLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARN 537
+L+ E +++ + +PI KV EA+ARKK R R+ K+K E + PD+S K +
Sbjct: 811 ALLAEMKQRFQNLAAKPIAKVAEARARKKTRADARLKAAKRKAEAVANDPDMSAGRKLKE 870
Query: 538 I 538
+
Sbjct: 871 V 871
>gi|297744408|emb|CBI37670.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 71/395 (17%)
Query: 2 EDITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT C+ + + + + D+VLHDGSPN+G W +A Q L + AL+LA+
Sbjct: 89 EDITKPACKARVKKLMSEYGCAAFDIVLHDGSPNIGGAWTQEATAQNALVIDALRLATQF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY S+L+ KQLF++V KP ASR SAEIFV+ Y APAK+D
Sbjct: 149 LAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVEVDKPAASRSTSAEIFVLGLKYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ E K+ + + +K GY L K + FI +TP
Sbjct: 209 PRLLDVKHLFQGT-IEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSSATNFIWSDTPLE 267
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 268 ILGSVTSIS--------------------------------------------------- 276
Query: 239 HFDDESVLK---HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
FDD + L H TT E++ C D+RVLG++D ++LLKW +H K ++
Sbjct: 277 -FDDPASLPIKDHALTTEEVKTLCDDLRVLGKQDFKHLLKWR--MHVRKALSPVQKATST 333
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLK 355
++ EKVV DE+E+ L + + ++ +++R K K+ +K++ + M +
Sbjct: 334 AAEDDHEKVV----DEDERMLNEMEELTYAMERKKKRTKKLLAKRQAKDKARKVTGMQVD 389
Query: 356 MLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITAS 390
L +G D E+F LS I+ L + ++
Sbjct: 390 ALEEG------YTDHELFSLSSIKAKKDLLAVNST 418
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAA+KL+QL+ K+ FL+ S+ +DLCAAPGGWMQ A + + S I D + +
Sbjct: 21 GYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAAVERVPVGSFILGVDLNPIAP 80
Query: 249 PSTTVEIQE 257
+ I+E
Sbjct: 81 VRGAISIEE 89
>gi|115465501|ref|NP_001056350.1| Os05g0567400 [Oryza sativa Japonica Group]
gi|113579901|dbj|BAF18264.1| Os05g0567400 [Oryza sativa Japonica Group]
Length = 819
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 135/281 (48%), Gaps = 57/281 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + A++LA+
Sbjct: 89 EDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY ++++ KQLF++V TKP ASR SAEI+++C Y APAK+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEVTKPTASRSTSAEIYIICLRYKAPAKIQ 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F + + K+ K +K GY L K S FI E T
Sbjct: 209 PELLDIKHLF-SVDPDPKKVRDPLKPDRQKRNRDGYEEGNTTLRKVGLASDFIWSEGQTP 267
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L EFL G + + I
Sbjct: 268 L--------------------------EFL-------------GSF-----------NAI 277
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
FDD + L H TT EI+ C+D+ VL + +++LKW
Sbjct: 278 SFDDPASLPIKNHELTTDEIKALCEDLYVLDKNSFKHILKW 318
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ +F FL ++ +DLCAAPGGW+QVA + + +
Sbjct: 20 QGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVAVNHAPVGAFV 70
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R + EI+ RP +KV EAKARKK+ +++DK ++K + + + D+++ K + I
Sbjct: 684 VAAMRAQFKEIDARPAKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINEQSKRKMI 742
>gi|326515274|dbj|BAK03550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 164/357 (45%), Gaps = 78/357 (21%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT +CR A+ R + + V DVVLHDGSPNVG W +A Q L + A++LA+
Sbjct: 90 EDITTTRCRSAVRRLMDSRGVAVFDVVLHDGSPNVGGAWAQEATAQSALVIDAVRLATAF 149
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY+++++ KQLF +V TKP+ASR SAEI+++C Y APAK+
Sbjct: 150 LAPKGAFITKVFRSQDYSAIMFCLKQLFDKVEVTKPRASRGTSAEIYIICLKYKAPAKIQ 209
Query: 119 TKFFDPKYAFKELGAEDGKLNAL-KKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
+ D K+ F + + L K +K GY + V VL K S FI E
Sbjct: 210 PELLDIKHLFSVDPEKSTPTDVLDTNKNAKKRTRGGYAAGVTVLEKVGLASDFIWSEA-- 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+ EFL G + +
Sbjct: 268 ------------------------QKPREFL-------------GSFTK----------- 279
Query: 238 IHFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKE 294
I FDD + L H TT E++ C+D++VL + +++LKW L + + K
Sbjct: 280 ISFDDPASLPIKNHELTTDEVKCLCEDLQVLDKNSFKHILKWRTRLRNALPSSSQVTPKA 339
Query: 295 GGE-------------------GEEEEKVVEDEMDEEEKELMKATKEIEELKDEERR 332
G G +EE ++ +DE + + TK+ EE+K E +R
Sbjct: 340 DGTATNTKVKGDVQLLQEMEEMGSDEEHQLDGMLDEAYERYV--TKKGEEVKQEHKR 394
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL QL+ +F FL ++ +DLCAAPGGW+QVA A + + D ++
Sbjct: 21 QGYRSRAAFKLQQLDDRFRFLPAARAVLDLCAAPGGWVQVAVARAPAGAFVVGVDLVPIR 80
Query: 248 -----HPST-TVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
H T + C +R L D R + + VLHD
Sbjct: 81 PVRGAHSLTEDITTTRCRSAVRRL--MDSRGVAVFDVVLHD 119
>gi|51854285|gb|AAU10666.1| unknown protein [Oryza sativa Japonica Group]
Length = 749
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 135/281 (48%), Gaps = 57/281 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + A++LA+
Sbjct: 89 EDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY ++++ KQLF++V TKP ASR SAEI+++C Y APAK+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEVTKPTASRSTSAEIYIICLRYKAPAKIQ 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F + + K+ K +K GY L K S FI E T
Sbjct: 209 PELLDIKHLFS-VDPDPKKVRDPLKPDRQKRNRDGYEEGNTTLRKVGLASDFIWSEGQTP 267
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L EFL G + + I
Sbjct: 268 L--------------------------EFL-------------GSF-----------NAI 277
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
FDD + L H TT EI+ C+D+ VL + +++LKW
Sbjct: 278 SFDDPASLPIKNHELTTDEIKALCEDLYVLDKNSFKHILKW 318
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ +F FL ++ +DLCAAPGGW+QVA + + +
Sbjct: 20 QGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVAVNHAPVGAFV 70
>gi|357132494|ref|XP_003567865.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Brachypodium distachyon]
Length = 847
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 141/286 (49%), Gaps = 67/286 (23%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR +I + + + V DVVLHDGSPNVG W +A Q L + +++LA+
Sbjct: 89 EDITTTKCRSSIRKLMDSKGVGAFDVVLHDGSPNVGGAWAQEATTQSALVIDSVRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY ++++ KQLF++V +TKP ASR SAEI+++CQ Y APAK+
Sbjct: 149 LAPKGTFVTKVFRSQDYNAIMFCLKQLFEKVEATKPTASRSTSAEIYIICQKYKAPAKIQ 208
Query: 119 TKFFDPKYAF---KELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFI--EH 173
+ D K+ F +E N KKK+ E+S GY VL K S FI E
Sbjct: 209 PELLDIKHLFSVDEEKSVPRDITNPGKKKR-ERS---GYGEGETVLGKAGLASDFIWSEA 264
Query: 174 ETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+TP EFL G +
Sbjct: 265 QTP----------------------------IEFL-------------GSF--------- 274
Query: 234 ASSIIHFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
I F+D + L H TT EI+ C+D+ VL + +++LKW
Sbjct: 275 --GAISFEDPASLPIKNHELTTEEIKHLCEDLYVLDKNSFKHILKW 318
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL+QL+ ++ FL ++ +DLCAAPGGW+QVA + + + D ++
Sbjct: 20 QGYRSRAAFKLLQLDARYRFLPTARAVLDLCAAPGGWVQVAVNHAPVGAFVVGVDLVPIR 79
Query: 248 -----HPST-TVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
H T + +C IR L D + + + VLHD
Sbjct: 80 PIRGAHSLTEDITTTKCRSSIRKL--MDSKGVGAFDVVLHD 118
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 477 ASLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKAR 536
A++ ++R EI+ RP +KV EAKARKK+ ++++K ++K + + + D+++ KA+
Sbjct: 701 AAMKAQFR----EIDARPSKKVAEAKARKKRVAMKKLEKARQKADIVADQSDINEKSKAK 756
Query: 537 NI 538
I
Sbjct: 757 MI 758
>gi|343171936|gb|AEL98672.1| FtsJ-like methyltransferase family protein, partial [Silene
latifolia]
Length = 775
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 203/431 (47%), Gaps = 78/431 (18%)
Query: 2 EDITTDKCRIAITREL--KTWKV-DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT KCR + + L +K DVVLHDGSPNVG W +A Q L + +LKLA+
Sbjct: 87 EDITQPKCRATVKKLLSDNGFKAFDVVLHDGSPNVGGAWAQEATSQNSLVIDSLKLATDF 146
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY ++++ ++ F +V KP ASR SAEI+V+ Y APAK+D
Sbjct: 147 LAPRGHFVTKVFRSQDYNAVVYCLRKFFDKVEVYKPIASRLSSAEIYVIGLKYKAPAKID 206
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D KY F E AE K+ + +K GY + ++ K P S F+ ++P
Sbjct: 207 PRMLDIKYLF-EGAAEPQKVIDVLDGNKQKRHRDGYEDGLTLVRKIHPASDFVWSDSPVE 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 266 MLGTTTSIS--------------------------------------------------- 274
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
F+D + L +H TT E+ C D+ VLG++D ++LLKW ++ K +
Sbjct: 275 -FNDAASLPLKEHALTTEEVITLCDDLSVLGKQDFKHLLKWR--INIRKAINSTTKTTTT 331
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEI-EELKDEERRELKRKKKKVSKERTKLQEKMNL 354
E +E V++E +E+++L+ +E+ ++ +++RE K + K+++K++ + M +
Sbjct: 332 VEAVKENDGVDEEEKDEDEKLLDEMEELTHAVERKQKREKKIQAKRLAKDKARKATGMQI 391
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPE-----VFADSDEEHIDIVPKK 409
+ G D E+F L I+ D DL T +P+ DSD+ D+ +
Sbjct: 392 DAMQDG------YGDNELFSLGSIKGKD--DLATVDEPDDVDLSELPDSDD---DVNNNE 440
Query: 410 IKYNVEKSELD 420
+ + E S+LD
Sbjct: 441 VVEHGESSDLD 451
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRA+FK+IQ++ KF L S+ +DLCAAPGGWMQVA Q +++ D +
Sbjct: 18 QGYRSRASFKIIQIDAKFGLLNSSRSILDLCAAPGGWMQVAVQRAPVGALVVGIDLVSIS 77
Query: 248 HPSTTVEIQE 257
V +QE
Sbjct: 78 PIRGAVSVQE 87
>gi|303390043|ref|XP_003073253.1| 23S rRNA methyl-transferase [Encephalitozoon intestinalis ATCC
50506]
gi|303302398|gb|ADM11893.1| 23S rRNA methyl-transferase [Encephalitozoon intestinalis ATCC
50506]
Length = 550
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 19/177 (10%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+D+CR+ + L T K DVVLHDG+PNVG +W DA++Q L L + +L + LK+G
Sbjct: 92 DITSDECRLRLREILGTHKADVVLHDGAPNVGTSWENDAFNQNLLVLHSARLTAEFLKKG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+DY SLL I QLF+ V ++KP +SR +SAEIF+VC +I ++D
Sbjct: 152 GVFVTKVFRSQDYFSLLNILSQLFETVETSKPLSSRSQSAEIFLVCLGFIGEEEVDYSIL 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
DP F E+ K G D N +K L +++F++ E P +L
Sbjct: 212 DPSAVFTEM------------------KETGGYEDFN-FHKKLKLTEFLKEENPEIL 249
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESV 245
KGYR+R+AFKL+Q+NRK+ FL+K+ V +DLCAAPG W QVA Q M + I+ D E +
Sbjct: 22 KGYRARSAFKLLQINRKYAFLEKAHVLIDLCAAPGSWCQVAAQEMPLRRKIVAVDLEPI 80
>gi|343171934|gb|AEL98671.1| FtsJ-like methyltransferase family protein, partial [Silene
latifolia]
Length = 775
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 203/431 (47%), Gaps = 78/431 (18%)
Query: 2 EDITTDKCRIAITREL--KTWKV-DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT KCR + + L +K D+VLHDGSPNVG W +A Q L + +LKLA+
Sbjct: 87 EDITQPKCRATVKKLLSDNGFKAFDLVLHDGSPNVGGAWAQEATSQNSLVIDSLKLATDF 146
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY ++++ ++ F +V KP ASR SAEI+V+ Y APAK+D
Sbjct: 147 LAPRGHFVTKVFRSQDYNAVVYCLRKFFDKVEVYKPIASRLSSAEIYVIGLKYKAPAKID 206
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D KY F E AE K+ + +K GY + ++ K P S F+ ++P
Sbjct: 207 PRMLDIKYLF-EGAAEPQKVIDVLDGNKQKRHRDGYEDGLTLVRKIRPASDFVWSDSPVE 265
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 266 MLGTTTSIS--------------------------------------------------- 274
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
F+D + L +H TT E+ C D+ VLG++D ++LLKW ++ K +
Sbjct: 275 -FNDAASLPLKEHALTTEEVITLCDDLSVLGKQDFKHLLKWR--INIRKAINSTTKTTTT 331
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEI-EELKDEERRELKRKKKKVSKERTKLQEKMNL 354
E +E V++E +E+++L+ +E+ ++ +++RE K + K+++K++ + M +
Sbjct: 332 VEAVKENDGVDEEEKDEDEKLLDEMEELTHAVERKQKREKKIQAKRLAKDKARKTTGMQI 391
Query: 355 KMLLKGDLGPTENDDEEMFKLSQIRTTDQLDLITASKPE-----VFADSDEEHIDIVPKK 409
+ G D E+F L I+ D DL T +P+ DSD+ D+ +
Sbjct: 392 DAMQDG------YGDNELFSLGSIKGKD--DLATVDEPDDVDLSELPDSDD---DVNNNE 440
Query: 410 IKYNVEKSELD 420
+ + E S+LD
Sbjct: 441 VVEHGESSDLD 451
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRA+FK+IQ++ KF L S+ +DLCAAPGGWMQVA Q +++ D +
Sbjct: 18 QGYRSRASFKIIQIDAKFGLLNSSRSILDLCAAPGGWMQVAVQRAPVGALVVGIDLVSIS 77
Query: 248 HPSTTVEIQE 257
V +QE
Sbjct: 78 PIRGAVSVQE 87
>gi|392512772|emb|CAD25667.2| rRNA METHYL-TRANSFERASE [Encephalitozoon cuniculi GB-M1]
Length = 550
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 19/179 (10%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTD+CR+ + L T K DVVLHDG+PNVG +W DA++Q L L + +LA+ L+
Sbjct: 90 VEDITTDECRLKLREILGTHKADVVLHDGAPNVGTSWENDAFNQNLLVLHSARLAAEFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLL + QLF V ++KP +SR +SAEIF+VC +I +D
Sbjct: 150 KGGVFVTKVFRSQDYFSLLNVLSQLFGSVETSKPLSSRSQSAEIFLVCLGFIGEEDVDYS 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+ F+E+ K G D N +K L +++F+ + P VL
Sbjct: 210 ILEASAVFEEM------------------KGAGGYDDFN-FHKTLKLTEFLREDDPVVL 249
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVL 246
KGYR+R+AFKL+Q+NRK+ FL+ + V +DLCAAPG W QVA Q M + I+ D E +
Sbjct: 22 KGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQVAAQEMPLRRKIVAIDLEPIK 81
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
+++ D L +++ K VLHD
Sbjct: 82 FIGDVDTIVEDITTDECRLKLREILGTHKADVVLHD 117
>gi|195567038|ref|XP_002107082.1| GD17262 [Drosophila simulans]
gi|194204479|gb|EDX18055.1| GD17262 [Drosophila simulans]
Length = 204
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 78/93 (83%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITT+KCR ++T+EL++WK DVVLHDG+PNVG NW+YDAY Q CLTL ALKL++ L+
Sbjct: 90 VEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLTLNALKLSTQFLR 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTK 93
GGWFVTKVFRSKDY +LLW+ KQLF++ K
Sbjct: 150 NGGWFVTKVFRSKDYNALLWVLKQLFKKFQVQK 182
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 66/98 (67%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G RSRAAFKLIQLNRKF FLQ+S+VC+DLCAAPGGWMQVAKQNM SSI+ D ++
Sbjct: 23 GLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVSSIVIGVDLFPIRP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ + + E DI R+ + L+ WK VLHD
Sbjct: 83 IAGCIGLVE---DITTEKCRQSLTKELQSWKADVVLHD 117
>gi|219117612|ref|XP_002179598.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408651|gb|EEC48584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 209
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 92/128 (71%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITTDKC+ I L+ VDVVLHDG+PN+G ++ DAY Q + L AL+ A+ L
Sbjct: 80 IGDITTDKCKSDIKHALQGRPVDVVLHDGAPNIGADYGKDAYEQNEIALHALRCATQHLV 139
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG F+TKV+RS+DY S W+ +QLFQ V + KP+ASR +SAEIF+VC+ Y AP+KLD +
Sbjct: 140 KGGTFITKVYRSRDYASFQWLLQQLFQGVQAFKPKASRAQSAEIFLVCEKYKAPSKLDPR 199
Query: 121 FFDPKYAF 128
DPK+ F
Sbjct: 200 LLDPKHVF 207
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 22/121 (18%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCV-DLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
+G RSRAAFKL Q+NRK+ L+K++ V DLCAAPGGW QVA + ++SV
Sbjct: 8 QGLRSRAAFKLTQINRKYPVLEKAQNAVLDLCAAPGGWTQVAARTC---------NKSV- 57
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVE 306
P V+I L + N ++ D T+K K + K +G + V+
Sbjct: 58 --PIIAVDI---------LPIRSFANAQNITTLIGDITTDKCKSDIKHALQGRPVDVVLH 106
Query: 307 D 307
D
Sbjct: 107 D 107
>gi|19074557|ref|NP_586063.1| rRNA METHYL-TRANSFERASE [Encephalitozoon cuniculi GB-M1]
Length = 573
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 19/179 (10%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTD+CR+ + L T K DVVLHDG+PNVG +W DA++Q L L + +LA+ L+
Sbjct: 113 VEDITTDECRLKLREILGTHKADVVLHDGAPNVGTSWENDAFNQNLLVLHSARLAAEFLR 172
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLL + QLF V ++KP +SR +SAEIF+VC +I +D
Sbjct: 173 KGGVFVTKVFRSQDYFSLLNVLSQLFGSVETSKPLSSRSQSAEIFLVCLGFIGEEDVDYS 232
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+ F+E+ K G D N +K L +++F+ + P VL
Sbjct: 233 ILEASAVFEEM------------------KGAGGYDDFN-FHKTLKLTEFLREDDPVVL 272
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVL 246
KGYR+R+AFKL+Q+NRK+ FL+ + V +DLCAAPG W QVA Q M + I+ D E +
Sbjct: 45 KGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQVAAQEMPLRRKIVAIDLEPIK 104
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
+++ D L +++ K VLHD
Sbjct: 105 FIGDVDTIVEDITTDECRLKLREILGTHKADVVLHD 140
>gi|397640151|gb|EJK73961.1| hypothetical protein THAOC_04392, partial [Thalassiosira oceanica]
Length = 391
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 154/323 (47%), Gaps = 50/323 (15%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+K + AI EL+ DVVL DG+PNVG ++ DAY Q L L LK A+ LK
Sbjct: 95 DITTEKTKAAIRAELQGAGCDVVLCDGAPNVGASYDKDAYEQNELALHCLKCATEHLKRH 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK++RS DY++ LW+ KQ F+ + KP ASR +SAEIF+VCQ Y+AP K+D + F
Sbjct: 155 GTFVTKLYRSADYSAYLWVAKQFFRECQAVKPAASRSQSAEIFLVCQGYVAPDKIDQRMF 214
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
DP+ F++ DG K KA + +N+ +K
Sbjct: 215 DPRCVFEQ---TDGAATGGGDKAQTGEKA----AKMNIFHK------------------- 248
Query: 183 ATEVGKGYRSRAAFKLIQLN---RKF----EFLQKSK-----VCVDLCAAPGGWMQVAKQ 230
E GK RSR + + L+ RK +FL+ + C+ QV K
Sbjct: 249 --EYGKRVRSRNGYDMTGLDASMRKIGSVRDFLEGGSEYDPIQMLSDCSGLAFKCQVCKD 306
Query: 231 NMMASSIIHFDDESV-----LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWW-KVLHDEK 284
D L+H T+ E++ C D++VL + D + LL W KV D K
Sbjct: 307 VPRPKEGEEPVDPGCSCRWYLEHRLTSPEVKTCLSDLKVLNKADFKALLTWREKVRADIK 366
Query: 285 TEKEKEEEKEGGEGEEEEKVVED 307
+ E +G ++ V D
Sbjct: 367 ARRAAASE----DGADDAGVASD 385
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 19/108 (17%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+GYRSRAAFKL Q+NRKF L ++ +DLCAAPGGW QV + S+
Sbjct: 23 QGYRSRAAFKLTQINRKFRVLNGARTVLDLCAAPGGWTQVCAR-------------SLPN 69
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
PSTT+ + V + +RN++ + EKT+ E +G
Sbjct: 70 DPSTTIVA------VDVHPIRPMRNVMTLVGDITTEKTKAAIRAELQG 111
>gi|449462216|ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Cucumis sativus]
Length = 854
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 150/331 (45%), Gaps = 67/331 (20%)
Query: 2 EDITTDKCRI---AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +C+ I E D++LHDGSPNVG W +A Q L + +++LA+ +
Sbjct: 89 QDITKPECKARLKKIMSEKGCAAFDLILHDGSPNVGGAWAQEAMAQNSLVIDSVRLATQL 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY+S+L+ KQLF++V KP ASR SAEI+V+ Y APAK+D
Sbjct: 149 LAPKGTFVTKVFRSQDYSSVLYCMKQLFEKVEVDKPAASRSASAEIYVLGIRYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D KY F+ K+ + + +K GY L K S FI ++P
Sbjct: 209 PRLLDVKYLFQGSIEPQQKVVDVLRGTKQKRHRDGYEDGATTLRKVSSASNFIWSDSPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T C I
Sbjct: 269 VLGTVT-----------------------------C-----------------------I 276
Query: 239 HFDDESVLK---HPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEG 295
FDD L H TT E++ C D+RVLG++D ++LLKW LH K ++
Sbjct: 277 AFDDPDSLPIKDHDLTTEEVKALCDDLRVLGKQDFKHLLKWR--LHIRKALSPDQKPTST 334
Query: 296 GEGEEEEKVVEDEMDEEEKELMKATKEIEEL 326
+ E +V +DE D K E+EEL
Sbjct: 335 SVKDAENEVKQDEDD-------KLLNEMEEL 358
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYRSRA++KL QL+ K+ FL+ S +DLCAAPGGWMQVA + + S++
Sbjct: 21 GYRSRASWKLAQLDSKYNFLRSSHAVLDLCAAPGGWMQVAVERVPVGSLV 70
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R + EI+ RP +KV EAKARKK+ ++++K++KK + + D+SD K + I
Sbjct: 695 VAAIRAQFKEIDARPAKKVAEAKARKKRIAMKKLEKVRKKANVISDQADISDRSKRKMI 753
>gi|17381234|gb|AAL36036.1| AT4g25730/F14M19_10 [Arabidopsis thaliana]
Length = 821
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 165/356 (46%), Gaps = 75/356 (21%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +C+ I + ++ V ++VLHDGSPNVG W +A Q L + +++LA+
Sbjct: 89 QDITRTECKSKIKQVMEQHGVSAFNLVLHDGSPNVGGAWAQEAMSQNALVIDSVRLATEF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G VTKVFRS+DY S+L+ +LF++V KP ASR SAE ++V Y+APAK+D
Sbjct: 149 LARNGNLVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLVGLKYLAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D ++ FKE K+ + +K GY ++L + + FI E P
Sbjct: 209 PRLLDYRHLFKESAEPTRKVVDVLGGSKQKRNRDGYEDGESILRRVASAADFIWSENPLD 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 269 VLGTTTSIS--------------------------------------------------- 277
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEE 291
FDD++ L +H TT EI+ C D+ VLG+ D +++LKW K L EK E K E
Sbjct: 278 -FDDQASLPLKEHDLTTEEIKILCDDLPVLGKNDFKHILKWRMQIRKALTPEKKEVAKPE 336
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTK 347
G EDE +E++K L E+EEL + R+ K+ KK ++K R K
Sbjct: 337 PDVGK---------EDEENEDDKLL----NELEELTNTVDRKKKQAKKILAKRRAK 379
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+RSRA++KL+QL+ K+ L + +DLCAAPGGWMQVA + + S++
Sbjct: 20 RGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPVGSLV 70
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
VN + + EIN RP +KV EAKARKK+ +R++K++KK T+ + D+SD K + I
Sbjct: 684 VNAMKAQFKEINARPAKKVAEAKARKKRAAQKRLEKVRKKANTISDTADISDRSKDKMI 742
>gi|22328933|ref|NP_194303.2| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
gi|332659706|gb|AEE85106.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
Length = 821
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 165/356 (46%), Gaps = 75/356 (21%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +C+ I + ++ V ++VLHDGSPNVG W +A Q L + +++LA+
Sbjct: 89 QDITRTECKSKIKQVMEQHGVSAFNLVLHDGSPNVGGAWAQEAMSQNALVIDSVRLATEF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G VTKVFRS+DY S+L+ +LF++V KP ASR SAE ++V Y+APAK+D
Sbjct: 149 LARNGNLVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLVGLKYLAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D ++ FKE K+ + +K GY ++L + + FI E P
Sbjct: 209 PRLLDYRHLFKESAEPTRKVVDVLGGSKQKRNRDGYEDGESILRRVASAADFIWSENPLD 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 269 VLGTTTSIS--------------------------------------------------- 277
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEE 291
FDD++ L +H TT EI+ C D+ VLG+ D +++LKW K L EK E K E
Sbjct: 278 -FDDQASLPLKEHDLTTEEIKILCDDLPVLGKNDFKHILKWRMQIRKALTPEKKEVAKPE 336
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTK 347
G EDE +E++K L E+EEL + R+ K+ KK ++K R K
Sbjct: 337 PDVGK---------EDEENEDDKLL----NELEELTNTVDRKKKQAKKILAKRRAK 379
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+RSRA++KL+QL+ K+ L + +DLCAAPGGWMQVA + + S++
Sbjct: 20 RGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPVGSLV 70
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
VN + + EIN RP +KV EAKARKK+ +R++K++KK T+ + D+SD K + I
Sbjct: 684 VNAMKAQFKEINARPAKKVAEAKARKKRAAQKRLEKVRKKANTISDTADISDRSKDKMI 742
>gi|297799420|ref|XP_002867594.1| AT4g25730/F14M19_10 [Arabidopsis lyrata subsp. lyrata]
gi|297313430|gb|EFH43853.1| AT4g25730/F14M19_10 [Arabidopsis lyrata subsp. lyrata]
Length = 821
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 183/395 (46%), Gaps = 81/395 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +C+ I + ++ V ++VLHDGSPNVG W +A Q L + +++LA+
Sbjct: 89 QDITRSECKSKIKQVMEQHGVSAFNLVLHDGSPNVGGAWAQEAMSQNALVIDSVRLATEF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G +TKVFRS+DY ++L+ +LF++V KP ASR SAE ++V Y+APAK+D
Sbjct: 149 LARNGNLITKVFRSRDYNAVLYCLGRLFEKVEVFKPPASRSASAETYLVGLKYLAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D ++ FKE K+ + +K GY ++L + + FI E P
Sbjct: 209 PRLLDYRHLFKEAAEPTRKVVDVLGGSKQKRNRDGYEDGESILRRVASAADFIWSENPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 269 VLGTVTSIS--------------------------------------------------- 277
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEE 291
FDD++ L +H TT EI+ C D+ VLG+ D +++LKW K L EK E K E
Sbjct: 278 -FDDQASLPLKEHDLTTEEIKILCDDLPVLGKNDFKHILKWRMQIRKALTPEKKEVAKPE 336
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERT--KLQ 349
G EDE +E++K L E+EEL + R+ K+ KK ++K R K +
Sbjct: 337 PDVGK---------EDEENEDDKLL----NELEELTNTVDRKKKQAKKILAKRRAKDKTR 383
Query: 350 EKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQL 384
+ N +M + D G +N E+F L+ I+ L
Sbjct: 384 KATNPQMDVLED-GYVDN---ELFSLAAIKGKKDL 414
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+RSRA++KL+QL+ K+ L S +DLCAAPGGWMQVA + + S++
Sbjct: 20 RGFRSRASYKLLQLDAKYSLLHSSHAVLDLCAAPGGWMQVAVEKVPVGSLV 70
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
VN + + EIN RP +KV EAKARKK+ +R++K++KK T+ + D+SD K + I
Sbjct: 684 VNAMKAQFKEINARPAKKVAEAKARKKRAAQKRLEKVRKKANTISDTADISDRSKDKMI 742
>gi|449329526|gb|AGE95797.1| rRNA methyl-transferase [Encephalitozoon cuniculi]
Length = 573
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 19/179 (10%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDITTD+CR+ + L T K DVVLHDG+PNVG +W DA++Q L L + +LA+ L+
Sbjct: 113 VEDITTDECRLKLREILGTHKADVVLHDGAPNVGTSWENDAFNQNLLVLHSARLAAEFLR 172
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SLL + QLF V ++KP +SR +SAEIF+VC +I +D
Sbjct: 173 KGGVFVTKVFRSQDYFSLLNVLSQLFGSVETSKPLSSRSQSAEIFLVCLGFIGEEDVDYS 232
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+ F+E+ A GY D +K L +++F+ + P VL
Sbjct: 233 ILEASAVFEEMKG-----------------AGGY--DGFNFHKTLKLTEFLREDDPVVL 272
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVL 246
KGYR+R+AFKL+Q+NRK+ FL+ + V +DLCAAPG W QVA Q M + I+ D E +
Sbjct: 45 KGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQVAAQEMPLRRKIVAIDLEPIK 104
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
+++ D L +++ K VLHD
Sbjct: 105 FIGDVDTIVEDITTDECRLKLREILGTHKADVVLHD 140
>gi|356538763|ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Glycine max]
Length = 829
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 130/278 (46%), Gaps = 52/278 (18%)
Query: 2 EDITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT +C+ I + + DV+LHDGSPNVG W +A Q L + A+KLA+
Sbjct: 89 EDITRPECKSRIKKLMNDHGCRAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTK+FRS+DY+S+++ KQLF++V KP ASR ESAEI+V+ Y APAK+D
Sbjct: 149 LAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ K+ + + +K GY L K + FI +P
Sbjct: 209 PRLLDVKHLFQGSVEPQPKVVDVLRDSKQKRHRDGYEDGDTTLRKLSSAANFIWSNSPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T + D +P
Sbjct: 269 ILGSVTSI--------------------------TFTDPADSP----------------- 285
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ H TT E++ C D+RVLG++D ++LLKW
Sbjct: 286 ------IKDHDLTTEEVKSLCDDLRVLGKQDFKHLLKW 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRA++KL+QLN KF FL+ ++ +DLCAAPGGWMQVA ++M + ++ D S +
Sbjct: 21 GYRSRASWKLVQLNNKFHFLESARAVLDLCAAPGGWMQVAVKSMPVNHLVIGVDLSPIAP 80
Query: 249 PSTTVEIQE 257
+ IQE
Sbjct: 81 VRGAIAIQE 89
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EI+ RP +KV EAKARKK+ R+++K++KK + + ++SD+ K + I
Sbjct: 700 EIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDSSKRKQI 749
>gi|224103395|ref|XP_002313039.1| predicted protein [Populus trichocarpa]
gi|222849447|gb|EEE86994.1| predicted protein [Populus trichocarpa]
Length = 840
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 133/281 (47%), Gaps = 58/281 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +CR I + + V D+VLHDGSPN+G W +A Q L + +++LA+
Sbjct: 89 QDITKPECRAKIKKIMGEHGVRAFDLVLHDGSPNIGGAWSQEAMAQNSLVIDSVRLATQF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY+S+++ QLF++V KP ASR SAEIFV+ Y APAK+D
Sbjct: 149 LAPKGTFVTKVFRSQDYSSVIYCLNQLFEKVEVDKPAASRSASAEIFVLGLRYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ K+ + + +K GY +++ K + FI ++P
Sbjct: 209 PRLLDIKHLFQGSDEPQRKVVDVLRGTKQKRHRDGYEDGESIVRKVSSAADFIWSDSPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 269 ILGSVTSIA--------------------------------------------------- 277
Query: 239 HFDDESVLK---HPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
FDDE L H TT E++ C D+RVLG++D ++LLKW
Sbjct: 278 -FDDEVSLPLRDHDLTTEEVKHLCDDLRVLGKQDFKHLLKW 317
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 10/101 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRA++KLIQL+ KF+FLQ S+ +DLCAAPGGWMQVA Q + S++ D +
Sbjct: 21 GYRSRASWKLIQLDTKFKFLQSSRAVLDLCAAPGGWMQVAVQRVPVRSLVLGIDLVKIAP 80
Query: 249 PSTTVEIQ------ECCKDI-RVLGRKDVRNLLKWWKVLHD 282
V I+ EC I +++G VR + VLHD
Sbjct: 81 LRGAVSIEQDITKPECRAKIKKIMGEHGVR---AFDLVLHD 118
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EIN RP +KV EAKARKK+ AR+++K++KK + + ++SD K R I
Sbjct: 704 EINARPAKKVAEAKARKKRVAARKLEKVRKKANDISKQTEISDHSKGRLI 753
>gi|156101269|ref|XP_001616328.1| FtsJ-like methyltransferase [Plasmodium vivax Sal-1]
gi|148805202|gb|EDL46601.1| FtsJ-like methyltransferase, putative [Plasmodium vivax]
Length = 1006
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 156/285 (54%), Gaps = 25/285 (8%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C I +K K DV+L+DG+PNVG + YD+++Q L L ++K+A+ LK+
Sbjct: 93 DITTGACIKQIKNIIKNEKADVILNDGAPNVGTTYSYDSFNQNVLVLNSIKIANLFLKKR 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFR+++Y SL+W+ ++LF +V KP++SR+ S+EI+++ ++++ AK+D K F
Sbjct: 153 GIFITKVFRNEEYVSLIWVMEKLFGQVKHIKPRSSREISSEIYLIGLNFLS-AKVDKKLF 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHET------- 175
D Y F E +D +KA+ + + ++ N ++ + +
Sbjct: 212 DYTYVFSEQFKQDS------------NKAVTNDASEDDIFSNSSDNEKEDKKKSKKKKGL 259
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
T+L + + +GY +++ + F+ S VDL +
Sbjct: 260 STILKEKKKKNRQGYDLGDDYRVTDI---CNFIH-SDNYVDLLIKTNKFTFDKDYLTSED 315
Query: 236 SIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV 279
++ ++ K+PSTT EI + CKD++VLG+ D+ +L+KW +KV
Sbjct: 316 PLVKSTYTAIYKNPSTTQEILQLCKDLKVLGKSDLFHLIKWRYKV 360
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQ+ +K+ + + + +DLCAAPGGW+QVA +NM SS I
Sbjct: 23 GYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQVAYKNMKRSSTI 72
>gi|401827093|ref|XP_003887639.1| rRNA methylase [Encephalitozoon hellem ATCC 50504]
gi|392998645|gb|AFM98658.1| rRNA methylase [Encephalitozoon hellem ATCC 50504]
Length = 551
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 19/179 (10%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDIT+++CR+ + L K DVVLHDG+PNVG +W DA++Q L L + KLAS LK
Sbjct: 90 VEDITSNECRLKLREILGAHKADVVLHDGAPNVGTSWENDAFNQNLLVLHSTKLASEFLK 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+GG FVTKVFRS+DY SL I QLF+ V ++KP +SR +SAEIF+VC ++ +D
Sbjct: 150 KGGVFVTKVFRSQDYFSLHSILAQLFETVETSKPLSSRSQSAEIFLVCLGFVGEENVDYS 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+P F E+ A GY D N +K L S+F++ + P VL
Sbjct: 210 VLEPSAVFTEM-----------------KDAGGY-DDFN-FHKKLNFSEFLKEDDPAVL 249
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESV 245
KGYR+R+AFKL+Q+NRK+ FL + V +DLCAAPG W QVA Q M + I+ D E +
Sbjct: 22 KGYRARSAFKLLQMNRKYGFLGNAHVLIDLCAAPGSWSQVAAQEMPLRRKIVAVDLEPI 80
>gi|413948516|gb|AFW81165.1| hypothetical protein ZEAMMB73_695440 [Zea mays]
Length = 810
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 134/281 (47%), Gaps = 58/281 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + AL+LA+
Sbjct: 89 EDITTTKCRAAVRRLMDSNGVSAFDVVLHDGSPNVGGAWAQEATSQSALVIDALRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY ++++ KQLF++V +TKP ASR SAEI+++C Y APAK+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEATKPTASRSTSAEIYIICLKYKAPAKIQ 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F + + + + ++ K GY L K S FI +
Sbjct: 209 PELLDIKHLFSVVPEQTKSRDVMDGRK--KRHRDGYEEGNTTLRKVGLASDFIWSDAQAP 266
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L EFL G + + I
Sbjct: 267 L--------------------------EFL-------------GSY-----------NAI 276
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
FD+ L H TT +I+ C+D+ +L + +++LKW
Sbjct: 277 SFDNPESLPIKNHELTTDDIKNFCEDLLLLDKNSFKHILKW 317
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ +F FL + +DLCAAPGGW+QVA + + +
Sbjct: 20 QGYRSRAAFKLLQLDARFRFLLTAHSVLDLCAAPGGWVQVAVNHAPVGAFV 70
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R + EI+ RP +KV EAKARKK+ +++DK ++K + + + D+++ K + I
Sbjct: 672 VAAMRAQFKEIDARPSKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINELSKRKMI 730
>gi|221057686|ref|XP_002261351.1| methyltransferase [Plasmodium knowlesi strain H]
gi|194247356|emb|CAQ40756.1| methyltransferase, putative [Plasmodium knowlesi strain H]
Length = 1009
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 148/278 (53%), Gaps = 11/278 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C I +K K DV+L+DG+PNVG + YD+++Q L L ++K+A+ LK+
Sbjct: 93 DITTSACVKQIKNIIKNEKADVILNDGAPNVGTTYSYDSFNQNVLVLNSIKIANLFLKKK 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFR+++Y SL+W+ ++LF +V KP++SR+ S+EI++V ++++ K+D K F
Sbjct: 153 GIFITKVFRNEEYVSLIWVMEKLFGQVKHIKPRSSREISSEIYLVGLNFLS-TKVDKKLF 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQH 182
D Y F E +D N + + SD + + T+L +
Sbjct: 212 DYNYVFSEQFKQDS--NKIVTNDASDNDLFTDSSDNEKENQKKNKK---KKGLSTILKEK 266
Query: 183 ATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
+ +GY +++ + F+ S VDL + ++
Sbjct: 267 KKKNRQGYEVGDDYRVTDI---CNFIH-SDNYVDLLIKTNKFTFDRDYLTSEDPLVRNTY 322
Query: 243 ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKV 279
++ K+PSTT EI + CKD++VLG+ D+ L+KW +KV
Sbjct: 323 TAIYKNPSTTQEILQLCKDLKVLGKSDLFQLIKWRYKV 360
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKLIQ+ +K+ + + + +DLCAAPGGW+QVA +NM +S+II D + K
Sbjct: 23 GYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQVAYKNMKRSSTIIGVDLVPIRK 82
Query: 248 HPSTTVEIQECCKDIRVLGRKDVRNLLK 275
+ + ++ C K ++N++K
Sbjct: 83 IDNNVITLK--CDITTSACVKQIKNIIK 108
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 478 SLVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKL 520
S++N+Y+ +I PI+KV+EAK R KKR+ +M K++ K+
Sbjct: 869 SILNQYKSSINKITKMPIKKVIEAKMRNKKREIAKMKKLEAKI 911
>gi|396081764|gb|AFN83379.1| 23S rRNA methyl-transferase [Encephalitozoon romaleae SJ-2008]
Length = 551
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 103/179 (57%), Gaps = 19/179 (10%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+EDIT+D+CR+ + L K DVVLHDG+PNVG +W DA++Q L L + KLAS LK
Sbjct: 90 VEDITSDECRLKLREILGAQKADVVLHDGAPNVGTSWENDAFNQNLLALHSTKLASEFLK 149
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GG F+TKVFRS+DY SL I QLF+ V ++KP +SR +SAEIF+VC +I +D
Sbjct: 150 RGGVFITKVFRSQDYFSLHNILSQLFETVETSKPLSSRSQSAEIFLVCLGFIGEENVDYS 209
Query: 121 FFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVL 179
+P F E +K G D N K L ++F++ + P VL
Sbjct: 210 LLEPSAVFTE------------------TKDAGGYDDFN-FCKKLKFTEFLKEDDPDVL 249
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVL 246
KGYR+R+AFKL+Q+NRK+ FL+ + V +DLCAAPG W QVA Q M + I+ D E +
Sbjct: 22 KGYRARSAFKLLQMNRKYAFLKNAHVLIDLCAAPGSWSQVAAQEMPLRRKIVAVDLEPIK 81
Query: 247 KHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHD 282
+++ D L +++ K VLHD
Sbjct: 82 FIGDVDTIVEDITSDECRLKLREILGAQKADVVLHD 117
>gi|413946564|gb|AFW79213.1| hypothetical protein ZEAMMB73_519366 [Zea mays]
gi|413946565|gb|AFW79214.1| hypothetical protein ZEAMMB73_519366 [Zea mays]
Length = 813
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 134/281 (47%), Gaps = 58/281 (20%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + AL+LA+
Sbjct: 89 EDITATKCRAAVRRLMDSNGVSAFDVVLHDGSPNVGGAWAQEATSQSALVIDALRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY ++++ KQLF++V +TKP ASR SAEI+++C Y APAK+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEATKPTASRSTSAEIYIICLKYKAPAKIQ 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F + + + L ++ K GY L K S FI +T
Sbjct: 209 PELLDIKHLFSVVPEQTKSRDVLDGRK--KRHRDGYEEGNTTLRKVGLASDFIWSDTQAP 266
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
L EFL G + + I
Sbjct: 267 L--------------------------EFL-------------GSY-----------NAI 276
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
FD+ L H TT +I+ C+D+ +L + +++LKW
Sbjct: 277 SFDNPESLPIKNHELTTDDIKNFCEDLLLLDKHSFKHILKW 317
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ +F FL ++ +DLCAAPGGW+QVA + + +
Sbjct: 20 QGYRSRAAFKLLQLDARFHFLPTARSVLDLCAAPGGWVQVAVNHAPVGAFV 70
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R + EI+ RP +KV EAKARKK+ +++DK ++K + + + D+++ K + I
Sbjct: 678 VAAMRAQFKEIDARPSKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINELSKRKMI 736
>gi|440491658|gb|ELQ74280.1| Putative SAM-dependent rRNA methyltransferase SPB1
[Trachipleistophora hominis]
Length = 553
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 82/109 (75%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D VLHDG+PNVG+ W DA+ Q L L A+K+++ ILK+ G F+TKVFRSKDY S+LW+
Sbjct: 107 TDCVLHDGAPNVGVCWEQDAFEQNELVLHAIKISTKILKKDGIFLTKVFRSKDYFSILWV 166
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKE 130
QLF+ V STKP +SR++SAEIFV C+ Y PAK+D KFFD + FKE
Sbjct: 167 LNQLFESVVSTKPISSREQSAEIFVFCRGYKKPAKIDDKFFDANHVFKE 215
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+GYR+R+A+KLIQLN+KF FLQ VDLC APGGW+QVA Q+ + I
Sbjct: 22 QGYRARSAYKLIQLNKKFNFLQSCSSVVDLCCAPGGWLQVAVQHNIPDII 71
>gi|356544480|ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
[Glycine max]
Length = 834
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 129/278 (46%), Gaps = 52/278 (18%)
Query: 2 EDITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT +C+ I + + DV+LHDGSPNVG W +A Q L + A+KLA+
Sbjct: 89 EDITRPECKSRIKKLMNDHGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVKLATQF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTK+FRS+DY+S+++ KQLF++V KP ASR ESAEI+V+ Y APAK+D
Sbjct: 149 LAPKGKFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLGYKAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D K+ F+ K+ + + +K GY L K + FI +P
Sbjct: 209 PRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRHRDGYEDGNTTLRKVSSAANFIWSNSPLE 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T + +
Sbjct: 269 ILGSVTSI-------------------------------------------------TFT 279
Query: 239 HFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
D + H T+ E++ C D+RVLG++D ++LLKW
Sbjct: 280 DPADSLIKDHDLTSEEVKSLCDDLRVLGKQDFKHLLKW 317
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRA++KL+QLN KF FL+ ++ +DLCAAPGGWMQV Q + ++ D + +
Sbjct: 21 GYRSRASWKLVQLNSKFGFLESARAVLDLCAAPGGWMQVVVQRVPVDHLVIGVDLAPIAP 80
Query: 249 PSTTVEIQE 257
+ IQE
Sbjct: 81 VRGAIAIQE 89
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EI+ RP +KV EAKARKK+ R+++K++KK + + ++SD K + I
Sbjct: 702 EIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDRSKRKQI 751
>gi|223997678|ref|XP_002288512.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975620|gb|EED93948.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 208
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 89/128 (69%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DITT+KC+ AI E++ DVVL DG+PNVG ++ DAY Q L L ALK A L+
Sbjct: 80 IGDITTEKCKAAIRSEMQGAGADVVLCDGAPNVGASYDRDAYMQNELALHALKCACEHLR 139
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+ G FVTK++RS DY++ LW+ KQ F V + KP ASR +SAEIF+VC+ YIAP K+D +
Sbjct: 140 KKGTFVTKLYRSSDYSAYLWVAKQFFHTVQAVKPSASRSQSAEIFLVCEGYIAPDKIDPR 199
Query: 121 FFDPKYAF 128
FDPK F
Sbjct: 200 MFDPKCVF 207
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 181 QHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHF 240
H+ +G+RSRAAFKL Q+NRKF L+ ++ +DLCAAPGGW QV +++ +S
Sbjct: 1 HHSVAKEQGFRSRAAFKLTQINRKFNILKNAQTIIDLCAAPGGWTQVCARSLPNNS---- 56
Query: 241 DDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEKEEEKEGGEGEE 300
STT+ + IR L K+V L+ D TEK K + +G
Sbjct: 57 ---------STTILAVD-ILPIRNLNSKNVITLIG------DITTEKCKAAIRSEMQGAG 100
Query: 301 EEKVVED 307
+ V+ D
Sbjct: 101 ADVVLCD 107
>gi|68074303|ref|XP_679066.1| methyltransferase [Plasmodium berghei strain ANKA]
gi|56499717|emb|CAH95392.1| methyltransferase, putative [Plasmodium berghei]
Length = 978
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 151/279 (54%), Gaps = 14/279 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ +C I ++ K DV+L+DG+PNVG + YD+++Q L L ++KLA L +G
Sbjct: 93 DITSAECIKKIKDIIQYEKADVILNDGAPNVGTTYSYDSFNQNILVLSSIKLAYKFLTKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFR+++Y SL+W+ ++LF V KP++SR+ S+EI+++ +++ K+D K+F
Sbjct: 153 GIFITKVFRNEEYVSLIWVLEKLFGEVKHIKPRSSREISSEIYLIGLNFLG-NKIDKKYF 211
Query: 123 DPKYAF-KELGAEDGKLNALKKK----QVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
D Y F + ++ KL+ + K + ++ G +D N K + T
Sbjct: 212 DFTYIFSNQFRKDENKLSNIHSKNETEEDSENDISGNDTDNNTSKHKTKKKKGLN----T 267
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L + + +GY ++ ++ +F+ S VDL ++ +
Sbjct: 268 ILKEKKKKNRQGYEEGDDYRTADIS---DFIN-SDNYVDLLIKSNKFIFDKNYEKSLDLL 323
Query: 238 IHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
I E++ + ST EI CKD++VLG+ D+ NL+KW
Sbjct: 324 IKNTYEAIYTNKSTNNEIFNLCKDLKVLGKSDLFNLIKW 362
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM-ASSIIHFDDESVLK 247
GYR+R+AFKLIQ+ RK+ + + + +DLCAAPGGW+QVA +NM S+II D + K
Sbjct: 23 GYRARSAFKLIQIARKYNIFKNANILIDLCAAPGGWLQVAYKNMNKNSTIIGVDLVPIRK 82
Query: 248 HPSTTVEIQ------ECCKDIR 263
+ + I+ EC K I+
Sbjct: 83 IDNNVITIKSDITSAECIKKIK 104
>gi|123476534|ref|XP_001321439.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121904265|gb|EAY09216.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 738
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 131/282 (46%), Gaps = 73/282 (25%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI K + + ++ K DVVL+DG+PNVG WV D+ +Q L L ++K ++ L++G
Sbjct: 93 DILLPKTHQRVRKLIQGQKADVVLNDGAPNVGAAWVTDSSNQLELCLASVKFSTLFLRKG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRS+ Y SLLW+ Q F++V TKP+ASR SAE+FVV Y AP +D +
Sbjct: 153 GSFVTKVFRSEHYNSLLWVLSQFFEKVVPTKPKASRDSSAELFVVALGYKAPDVVDQRLL 212
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDV-----NVLYKNLPVSKFIEHETPT 177
DP Y F + L+ L K PS V ++ Y + VS+++ E P
Sbjct: 213 DPTYVFSD-------LDELIAKH-------AVPSGVETKMTSIDYSTISVSEYLRAEKPL 258
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
+L A + +
Sbjct: 259 DILTTANK---------------------------------------------------L 267
Query: 238 IHFDD---ESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ DD ++ L HP TT EI+ D++++G D + LLKW
Sbjct: 268 VFGDDPVSQAALNHPQTTNEIKTLLSDLKLVGFSDRKVLLKW 309
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
GYRSRAAFKLIQLN++F FL + VC+DLCAAPGGW QVA + M + + II D
Sbjct: 24 GYRSRAAFKLIQLNQQFNFLNDAHVCLDLCAAPGGWSQVAAKYMPVGAQIIAID 77
>gi|2695746|emb|CAA11034.1| Pmt2 [Schizosaccharomyces pombe]
Length = 663
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 155/317 (48%), Gaps = 63/317 (19%)
Query: 51 ALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQH 110
++KLA L GG FVTKVFRS+DY +LLW+FKQLF +V +TKP +SR SAEIFVVC+
Sbjct: 2 SMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIFVVCRG 61
Query: 111 YIAPAKLDTKFFDPKYAFKELGAEDGKLNA-LKKKQVEKSKALGYPSDVNVLYKNLPVSK 169
Y AP KLD +F DP+ F+E+ ++A + + K GY D L+K + S+
Sbjct: 62 YKAPKKLDPRFTDPRTVFEEVQEPVTNVDAKVFHPEKRKRSREGYADDDYTLHKTVLASE 121
Query: 170 FIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
F+ P +L + E+
Sbjct: 122 FVTANDPIQILGTSAEI------------------------------------------- 138
Query: 230 QNMMASSIIHFDDESVLKHPSTTVEIQE---CCKDIRVLGRKDVRNLLKWWKVLHDEKTE 286
+ DDE + + V +E CC D++VLG+K+ R++L+W + DE
Sbjct: 139 -------VFPKDDEECQRLYNLDVTTEEILLCCSDLQVLGKKEFRDILRWRLKIRDEMG- 190
Query: 287 KEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERT 346
G + E+E+K V E E E + +E+++L + ER +LKR+++K ++ +
Sbjct: 191 -------IGKKVEDEQKTVV-EEIPEMDEEERLDQELQDLSEAERVKLKRERRKANQRKQ 242
Query: 347 KLQEKMNLKMLLKGDLG 363
+ +M + ML D+G
Sbjct: 243 REIVRMQMGMLAPMDIG 259
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 484 RKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
R+K +N RPI+KV+EA+ RKK R +R+ ++ KK E + E+ D++++EKA+ I
Sbjct: 547 REKMKALNARPIKKVLEAQGRKKMRTIKRLQRVAKKAEGISESGDMTESEKAKEI 601
>gi|387592418|gb|EIJ87442.1| FtsJ cell division protein [Nematocida parisii ERTm3]
gi|387596902|gb|EIJ94522.1| FtsJ cell division protein [Nematocida parisii ERTm1]
Length = 570
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 84/126 (66%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT C+ I + +VD+VLHDG+PNVG +W D+Y Q L A KLA ILK+
Sbjct: 97 DITDKICKAEILAAVGETEVDLVLHDGAPNVGASWERDSYVQNELVCHAAKLACKILKKN 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKD+ SL+W+ QLF +TKP++SR ESAE F+VC+ Y P LD KFF
Sbjct: 157 GTFVTKVFRSKDFNSLVWMCNQLFTECLTTKPRSSRDESAEAFLVCRGYKKPDTLDEKFF 216
Query: 123 DPKYAF 128
DP + F
Sbjct: 217 DPLFIF 222
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQLN+ F L VDLCAAPGGW+QV + ++ S I
Sbjct: 28 GYRARSAFKLIQLNQSFNLLSNIHSAVDLCAAPGGWLQVLSKTVLPPSKI 77
>gi|378754417|gb|EHY64450.1| FtsJ cell division protein [Nematocida sp. 1 ERTm2]
Length = 568
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 110/204 (53%), Gaps = 8/204 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT C I + ++D+VLHDG+PNVG +W D+Y Q L A KLA IL++
Sbjct: 97 DITDKHCVSDIMSAVGETEIDLVLHDGAPNVGASWERDSYVQNELVCHAAKLACKILRKN 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTKVFRSKD+ SL+W+ QLF +TKP++SR ESAE F+VC+ Y P LD +FF
Sbjct: 157 GTFVTKVFRSKDFNSLVWMCSQLFTECITTKPRSSRDESAEAFLVCRGYKKPESLDERFF 216
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYK-NLPVSKFIEHETPTVLLQ 181
DP + F E N L S LG D+ K N+ K + E +LL
Sbjct: 217 DPLFLFAEKDEVVAAENNL-------SSILGDRIDLTHCTKVNIDCMKDMIDEETAILLS 269
Query: 182 HATEVGKGYRSRAAFKLIQLNRKF 205
VG+ R R L ++ + +
Sbjct: 270 DLQVVGEADRRRLVRTLKKIQKAY 293
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQLN+ F L VDLCAAPGGW+QV + + S I
Sbjct: 28 GYRARSAFKLIQLNQSFNLLSNIHTAVDLCAAPGGWLQVLSKTVRPPSKI 77
>gi|297809739|ref|XP_002872753.1| hypothetical protein ARALYDRAFT_911801 [Arabidopsis lyrata subsp.
lyrata]
gi|297318590|gb|EFH49012.1| hypothetical protein ARALYDRAFT_911801 [Arabidopsis lyrata subsp.
lyrata]
Length = 804
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 172/375 (45%), Gaps = 80/375 (21%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+VLHDGSPNVG W +A Q L + +LKLA+ L G F+TK+FRS+DY S+++
Sbjct: 115 DLVLHDGSPNVGGAWSQEAMSQNALVIDSLKLATEFLAPHGNFITKIFRSRDYDSVVYCL 174
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKLNALK 142
+LF+ V KP ASR SAE +++ +Y AP K++ D + FK + K+ +
Sbjct: 175 GELFENVEVFKPMASRSTSAETYLLGLNYKAPDKINPNLLDYRQLFKVVAEPTKKVKDVL 234
Query: 143 KKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLN 202
+K GY ++L K + FI E P +L T
Sbjct: 235 GGSKQKRNRDGYEDGESILRKVASAADFIWSENPLEILGTVT------------------ 276
Query: 203 RKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL---KHPSTTVEIQECC 259
C I FDD++ L +H TT E++ C
Sbjct: 277 -----------C-----------------------ISFDDQASLPLKEHNLTTEEVKTLC 302
Query: 260 KDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKE 315
D+ VLG+ D +++LKW K L EK E K+E G EDE +E++K
Sbjct: 303 DDLPVLGKNDFKHILKWRMQIRKALSPEKKEGTKKELDVGK---------EDEENEDDKL 353
Query: 316 LMKATKEIEELKDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTEND--DEEMF 373
L E+EEL + R+ KR KK ++K R K M K + +G E+ D E+F
Sbjct: 354 L----NELEELTNTADRKNKRAKKLLAKRRAK---DMTRKA-IGPQIGALEDGYVDHELF 405
Query: 374 KLSQIRTTDQLDLIT 388
LS ++ + DL+T
Sbjct: 406 SLSVMKG--KKDLMT 418
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G RSRA++KL+QL+ KF FL S+ +DLCAAPGGWMQVA Q + S++
Sbjct: 21 GLRSRASYKLLQLDAKFNFLHSSRTVLDLCAAPGGWMQVAVQKVPVGSLV 70
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
VN + + EIN RP +KV EAKARKK+ +R++K++KK T+ + D+S+ K + I
Sbjct: 684 VNAMKAQFKEINARPAKKVAEAKARKKRAAMKRLEKVRKKANTISDTADISNRSKDKMI 742
>gi|303283660|ref|XP_003061121.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457472|gb|EEH54771.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 197
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 88/119 (73%), Gaps = 1/119 (0%)
Query: 1 MEDITTDKCRIAITRELK-TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
++DITT CR + R K DVV+HDG+PNVG N+ ++Y Q LTL +L+LA+ L
Sbjct: 78 VDDITTQSCRAQLKRVTPDGVKYDVVMHDGAPNVGGNFAAESYTQAALTLDSLRLATEFL 137
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+EGGWFVTKVFRS +Y +LL+ +QLF++V STKP ASR SAEI+VVC Y+AP+K+D
Sbjct: 138 REGGWFVTKVFRSTEYHALLYSMQQLFKKVESTKPVASRGTSAEIYVVCIGYLAPSKID 196
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+RSRAAFKL+QLNRK++F ++ C+DLCAAPGGW+QVA + M M+S+I+ D
Sbjct: 10 QGFRSRAAFKLVQLNRKYDFFSGARACMDLCAAPGGWLQVAVKYMPMSSTIVGVD 64
>gi|255079048|ref|XP_002503104.1| predicted protein [Micromonas sp. RCC299]
gi|226518370|gb|ACO64362.1| predicted protein [Micromonas sp. RCC299]
Length = 200
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
Query: 1 MEDITTDKCRIAITREL-KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
++DITT CR + R + K D+V++DG+PNVG N+ ++Y Q LTL +L+LAS L
Sbjct: 81 VDDITTQSCRAQLRRVTPEGTKYDIVMNDGAPNVGGNFAAESYTQAALTLDSLRLASEFL 140
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+EGGWFVTKVFRS +Y +LL+ +QLF++V STKP ASR SAEI+VVC Y+APAK+D
Sbjct: 141 REGGWFVTKVFRSTEYHALLYSMQQLFKKVESTKPVASRGTSAEIYVVCIGYLAPAKID 199
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 48/60 (80%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRA+FKL+QLNRK++F ++ C+DLCAAPGGW+QVA++ M SS+I D + +K
Sbjct: 13 QGFRSRASFKLVQLNRKYDFFSGARACMDLCAAPGGWLQVAQKYMPMSSLIVGVDLAPIK 72
>gi|389584507|dbj|GAB67239.1| FtsJ-like methyltransferase [Plasmodium cynomolgi strain B]
Length = 1010
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 62/330 (18%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C I +K K DV+L+DG+PNVG + YD+++Q L L ++K+A+ LK+
Sbjct: 93 DITTSACIKQIKNIIKNEKADVILNDGAPNVGTTYSYDSFNQNVLVLNSIKIANLFLKKR 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F TKVFR+++Y SL+W+ ++LF +V KP++SR+ S+EI+++ ++++ K+D K F
Sbjct: 153 GIFTTKVFRNEEYVSLIWVMEKLFGQVKHVKPRSSREISSEIYLIGLNFLS-TKVDKKLF 211
Query: 123 DPKYAFKE---------LGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEH 173
D Y F E + D + + +K GY D+ Y+ + FI
Sbjct: 212 DYTYVFSEQFKQESNKVVTNNDSDNDIFTDSKKKKKNRQGY--DLGDDYRVTDICNFIHS 269
Query: 174 ETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+ L LI+ N KF F + D
Sbjct: 270 DNYVDL------------------LIKTN-KFTFDKDYLTSED----------------- 293
Query: 234 ASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW-WKVLHDEKTEKEKEEE 292
++ ++ K+ STT EI + CKD++VLG+ D+ +L+KW +KV K
Sbjct: 294 --PLVRSTYTAIYKNTSTTQEILQLCKDLKVLGKSDLFHLIKWRYKV--------RKGIV 343
Query: 293 KEGGEGEEEEKVVEDEMDEEEKELMKATKE 322
GGE + + V +++EE+ +++ KE
Sbjct: 344 SVGGEAQSSQTV---DVEEEDSQVVAPVKE 370
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQ+ +K+ + + + +DLCAAPGGW+QVA +NM SS I
Sbjct: 23 GYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQVAYKNMKRSSTI 72
>gi|402468079|gb|EJW03280.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Edhazardia aedis
USNM 41457]
Length = 516
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
Query: 3 DIT-TDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT D C I R + D+VLHDG+PNVG +W DAY Q L L A+ LA +L++
Sbjct: 90 DITHIDICLKEI-RNILDGPCDLVLHDGAPNVGTDWTIDAYQQNELVLSAMNLACKLLRK 148
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV+KVFRSKDY+SLLW+F QLF V TKP ASR ESAEI++V +++ P K+D
Sbjct: 149 NGTFVSKVFRSKDYSSLLWLFNQLFDDVSVTKPLASRNESAEIYIVAKNFKRPDKIDPDM 208
Query: 122 FDPKYAFKE 130
FDP F+E
Sbjct: 209 FDPNKIFEE 217
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKL+QLN+K+ LQ + V VDLCAAPGGW+QV + + I+ D +
Sbjct: 22 GYRARSAFKLVQLNKKYGLLQCNNV-VDLCAAPGGWLQVLNNELPVMRQIVGIDLCPIKP 80
Query: 248 HPSTTVEIQECCKDIRV-LGRKDVRNLLKWWK--VLHD 282
P + + C + + K++RN+L VLHD
Sbjct: 81 IPGVSTLV---CDITHIDICLKEIRNILDGPCDLVLHD 115
>gi|293333905|ref|NP_001168052.1| hypothetical protein [Zea mays]
gi|223945719|gb|ACN26943.1| unknown [Zea mays]
gi|413946566|gb|AFW79215.1| hypothetical protein ZEAMMB73_519366 [Zea mays]
Length = 298
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 87/130 (66%), Gaps = 3/130 (2%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + AL+LA+
Sbjct: 89 EDITATKCRAAVRRLMDSNGVSAFDVVLHDGSPNVGGAWAQEATSQSALVIDALRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G F+TKVFRS+DY ++++ KQLF++V +TKP ASR SAEI+++C Y APAK+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEATKPTASRSTSAEIYIICLKYKAPAKIQ 208
Query: 119 TKFFDPKYAF 128
+ D K+ F
Sbjct: 209 PELLDIKHLF 218
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYRSRAAFKL+QL+ +F FL ++ +DLCAAPGGW+QVA + + +
Sbjct: 20 QGYRSRAAFKLLQLDARFHFLPTARSVLDLCAAPGGWVQVAVNHAPVGAFV 70
>gi|429964490|gb|ELA46488.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vavraia culicis
'floridensis']
Length = 314
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 81/108 (75%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D VLHDG+PNVG+ W DA+ Q L L A+K+++ ILK+ G F+TKVFRSKDY S+LW+
Sbjct: 108 DCVLHDGAPNVGVCWEKDAFEQNELVLHAIKISTKILKKDGVFLTKVFRSKDYFSILWVL 167
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKE 130
QLF+ V STKP +SR+ SAEIFV C+ Y P+K+D KFFD + FKE
Sbjct: 168 NQLFESVVSTKPISSREVSAEIFVFCRGYKKPSKIDDKFFDANHVFKE 215
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
+GYR+R+A+KLIQLN+KF FL VDLC APGGW+QVA Q+
Sbjct: 22 QGYRARSAYKLIQLNKKFNFLSTCTSVVDLCCAPGGWLQVAVQH 65
>gi|124513798|ref|XP_001350255.1| methyltransferase, putative [Plasmodium falciparum 3D7]
gi|23615672|emb|CAD52664.1| methyltransferase, putative [Plasmodium falciparum 3D7]
Length = 1019
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT C I +K K DV+L+DG+PNVG + YD+++Q L L ++K+A LK+
Sbjct: 93 DITTSDCIKKIKNIIKMDKADVILNDGAPNVGTTYSYDSFNQNVLVLNSIKIAYIFLKKN 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+TKVFR+++Y SL+W+ ++LF V KP++SR+ S+EI++V +++ K+D K F
Sbjct: 153 GIFITKVFRNEEYISLIWVLEKLFGDVKHIKPRSSREISSEIYLVGLNFLGK-KVDKKLF 211
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYK---------NLPVSKFIEH 173
D Y F ++ K N+ K +E + ++ N + K +
Sbjct: 212 DYTYIF----SDQFKKNSNKSSLLETKQESYLDNNENYFSDEESNDEEKVGEKIDKKKKK 267
Query: 174 ETPTVLLQ------HATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
T+L + +VG YR+ I KS VDL +
Sbjct: 268 GLSTILKEKKKKNRQGYDVGDDYRATDICTFI----------KSDNYVDLLIKNNKFTFD 317
Query: 228 AKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDVRNLLKW 276
+ +I E + K+ TT EI C D++VLG+ D+ NL+KW
Sbjct: 318 KNYKNNSDPMIKTIYECIYKNECTTKEIFFLCNDLKVLGKSDLYNLIKW 366
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+R+AFKLIQ+ +KF + + + +DLCAAPGGW+QVA +NM S I
Sbjct: 23 GYRARSAFKLIQIAQKFNVFKNANILIDLCAAPGGWLQVAYKNMSKQSTI 72
>gi|71396836|ref|XP_802426.1| FtsJ cell division protein [Trypanosoma cruzi strain CL Brener]
gi|70862921|gb|EAN80980.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 211
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 79/116 (68%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT DK R I LK VD V+HDG+PNVG W D + Q L L A K+A+ +LK
Sbjct: 93 DITDDKTRKMIVTYLKKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPS 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
GWFVTKVFRS+D+ L+W+ KQLF +V +TKP ASR ESAEIFVVC + A +LD
Sbjct: 153 GWFVTKVFRSQDFHKLMWVLKQLFDKVEATKPLASRMESAEIFVVCAGFKAQKQLD 208
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFD 241
+G+R+R+AFKLIQLNRK++FL KS+V VDLCAAPGGW QVA ++M + S I+ D
Sbjct: 23 QGFRARSAFKLIQLNRKYDFLAKSRVLVDLCAAPGGWCQVAAKHMPVGSKIVGVD 77
>gi|4539291|emb|CAB39594.1| putative protein [Arabidopsis thaliana]
gi|7269423|emb|CAB81383.1| putative protein [Arabidopsis thaliana]
Length = 821
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 160/356 (44%), Gaps = 75/356 (21%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
+DIT +C+ I + ++ V ++VLHDGSPNVG W +A Q L + +++LA+
Sbjct: 89 QDITRTECKSKIKQVMEQHGVSAFNLVLHDGSPNVGGAWAQEAMSQNALVIDSVRLATEF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G VTK+ + + L ++ QLF++V KP ASR SAE ++V Y+APAK+D
Sbjct: 149 LARNGNLVTKMCVPEPFFLLAFLLVQLFEKVEVFKPPASRSASAETYLVGLKYLAPAKID 208
Query: 119 TKFFDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPTV 178
+ D ++ FKE K+ + +K GY ++L + + FI E P
Sbjct: 209 PRLLDYRHLFKESAEPTRKVVDVLGGSKQKRNRDGYEDGESILRRVASAADFIWSENPLD 268
Query: 179 LLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+L T +
Sbjct: 269 VLGTTTSIS--------------------------------------------------- 277
Query: 239 HFDDESVL---KHPSTTVEIQECCKDIRVLGRKDVRNLLKW----WKVLHDEKTEKEKEE 291
FDD++ L +H TT EI+ C D+ VLG+ D +++LKW K L EK E K E
Sbjct: 278 -FDDQASLPLKEHDLTTEEIKILCDDLPVLGKNDFKHILKWRMQIRKALTPEKKEVAKPE 336
Query: 292 EKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEELKDEERRELKRKKKKVSKERTK 347
G EDE +E++K L E+EEL + R+ K+ KK ++K R K
Sbjct: 337 PDVGK---------EDEENEDDKLL----NELEELTNTVDRKKKQAKKILAKRRAK 379
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+RSRA++KL+QL+ K+ L + +DLCAAPGGWMQVA + + S++
Sbjct: 20 RGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPVGSLV 70
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
VN + + EIN RP +KV EAKARKK+ +R++K++KK T+ + D+SD K + I
Sbjct: 684 VNAMKAQFKEINARPAKKVAEAKARKKRAAQKRLEKVRKKANTISDTADISDRSKDKMI 742
>gi|357473309|ref|XP_003606939.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
gi|355507994|gb|AES89136.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
Length = 780
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Query: 2 EDITTDKCRI---AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDIT +CR I E DV+LHDGSPNVG W +A Q L + A+KLA+
Sbjct: 91 EDITRPECRSRVRKIMNENGYSAFDVILHDGSPNVGGAWAQEATTQNSLVIDAVKLATQF 150
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
L G FVTKVFRS+DY S++W K+LF++V KP ASR ESAEI+++ Y+APA++D
Sbjct: 151 LAPKGTFVTKVFRSQDYNSVVWCLKKLFEKVEVEKPPASRSESAEIYLLGIKYLAPARID 210
Query: 119 TKFFDPKYAF 128
+ D K+ F
Sbjct: 211 PRILDIKHLF 220
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR RA++KLIQLN KF FL+ S ++LCAAPGGW QVA Q + ++ D + +K
Sbjct: 23 GYRCRASWKLIQLNSKFHFLESSCAVLNLCAAPGGWTQVAVQRVPVDHLVIGVDLAPMKP 82
Query: 249 PSTTVEIQE 257
+ IQE
Sbjct: 83 IRGVISIQE 91
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 479 LVNEYRKKRVEINVRPIRK----VVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEK 534
++E RK RV V+PI K V EAKARKK+ R+++K++KK + + D+SD K
Sbjct: 631 FLDEERKHRVP--VKPITKEQVAVAEAKARKKRVAMRKIEKIRKKANAISDQSDISDRSK 688
Query: 535 ARNI 538
++ I
Sbjct: 689 SKQI 692
>gi|302758758|ref|XP_002962802.1| hypothetical protein SELMODRAFT_438129 [Selaginella moellendorffii]
gi|300169663|gb|EFJ36265.1| hypothetical protein SELMODRAFT_438129 [Selaginella moellendorffii]
Length = 639
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 3 DITTDKCRIAITREL---KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DITT KC I + L VDVVLHDGSPNVG W +A Q L L +LKLA+ L
Sbjct: 28 DITTPKCASDIGKILDQNGLRMVDVVLHDGSPNVGGAWAKEAMTQSSLVLDSLKLATKFL 87
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
G FVTKVFRS+DY +L + F+QLF +V ASR SAEI+VV Y+AP K+D
Sbjct: 88 APKGTFVTKVFRSQDYNALKYAFEQLFAKVEV----ASRSTSAEIYVVGLKYLAPVKIDP 143
Query: 120 KFFDPKYAFKELGAED--GKLNALKKKQVEKSKALGYPSDVNVLYKNLPVSKFIEHETPT 177
+ DP++ F+E+ G + K ++ SK Y K+ + F+ E P
Sbjct: 144 RNLDPRFLFEEIPQPPKVGFVIVNKVLALKPSKLCRYDDANTTFRKDCTAADFVWSEKPL 203
Query: 178 VLLQHATEV 186
LL T +
Sbjct: 204 ELLGSITSI 212
>gi|83286571|ref|XP_730220.1| cell division protein FtsJ [Plasmodium yoelii yoelii 17XNL]
gi|23489880|gb|EAA21785.1| FtsJ cell division protein, putative [Plasmodium yoelii yoelii]
Length = 874
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 132/249 (53%), Gaps = 11/249 (4%)
Query: 30 SPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRV 89
+PNVG + YD+++Q L L ++KLA L +GG F+TKVFR+++Y SL+W+ ++LF V
Sbjct: 3 APNVGTTYSYDSFNQNILVLSSIKLAYKFLTKGGIFITKVFRNEEYVSLIWVLEKLFGEV 62
Query: 90 HSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAF-KELGAEDGKL-NALKKKQVE 147
KP++SR+ S+EI+++ +++ K+D K+FD Y F + ++ KL N K + E
Sbjct: 63 KHIKPRSSREISSEIYLIGLNFLG-NKIDKKYFDFTYIFSNKFRKDENKLSNIHSKNETE 121
Query: 148 KSKALGYPSDVNVLYKNLPVSKFIEHETPTVLLQHATEVGKGYRSRAAFKLIQLNRKFEF 207
+ +D + K + T+L + + +GY ++ + +F
Sbjct: 122 DLENDDSENDSDTNNFKNKKKKGL----STILKEKKKKNRQGYEKGDDYRTADXS---DF 174
Query: 208 LQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGR 267
+ VDL ++ ++ +I E++ + ST EI CKD++VLG+
Sbjct: 175 INNDNY-VDLLIKSNKFIFDKNYKNSSNLLIKNTYEAIYTNKSTNNEIFNLCKDLKVLGK 233
Query: 268 KDVRNLLKW 276
D+ NL+KW
Sbjct: 234 SDLFNLIKW 242
>gi|70944493|ref|XP_742172.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521000|emb|CAH79645.1| hypothetical protein PC000405.03.0 [Plasmodium chabaudi chabaudi]
Length = 284
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT+ +C I +K K DV+L+DG+PNVG + YD+++Q L L ++KLA L
Sbjct: 92 SDITSVECIRKIKDIIKYEKADVILNDGAPNVGTTYSYDSFNQNILVLSSIKLAYKFLTR 151
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+TKVFR+++Y SL+W+ ++LF V KP++SR+ S+EI+++ +++ K+D K+
Sbjct: 152 GGIFITKVFRNEEYVSLIWVLEKLFTEVKHIKPRSSREISSEIYLIGLNFLGN-KIDKKY 210
Query: 122 FDPKYAF 128
FD Y F
Sbjct: 211 FDYTYIF 217
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM-ASSIIHFDDESVLK 247
GYR+R+AFKLIQ+ +K+ + + + +DLCAAPGGW+QVA +NM +S+II D + K
Sbjct: 23 GYRARSAFKLIQIAKKYNIFKNANILIDLCAAPGGWLQVAYKNMSKSSTIIGVDLMPIRK 82
Query: 248 HPSTTVEIQ------ECCKDIR 263
+ + I+ EC + I+
Sbjct: 83 IDNNVITIKSDITSVECIRKIK 104
>gi|429961997|gb|ELA41541.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vittaforma
corneae ATCC 50505]
Length = 503
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 81/126 (64%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT CR + R L+ +VD+ +HDG+P+ G + D + Q L L ALKLA+ LKEG
Sbjct: 89 DITTADCRRTLIRYLEGHQVDIFVHDGAPSFGSSKDRDIFIQNDLVLHALKLATEFLKEG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FRS+++ + + ++LF +V TKP +SR ESAEIF VC+ + P +D F
Sbjct: 149 GAFVTKIFRSENFFKITKVLEELFVQVDITKPMSSRSESAEIFAVCRRFRNPEAIDPSIF 208
Query: 123 DPKYAF 128
+ + F
Sbjct: 209 NSEVLF 214
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS-SIIHFDDESVL 246
KGYR+R+AFKL++LNRK+ FL + + VDLCAAPGGWMQ+ Q M + II D + +
Sbjct: 18 KGYRARSAFKLLELNRKYNFLSNTNIAVDLCAAPGGWMQILAQEMPSPRKIIGIDLDPIK 77
Query: 247 KHPSTTV 253
S T+
Sbjct: 78 PLGSDTI 84
>gi|399949976|gb|AFP65632.1| SAM-dependent methyltransferase [Chroomonas mesostigmatica
CCMP1168]
Length = 309
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Query: 3 DITTDKCRIAITRE--LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
DIT+ C AI K K+DVVLHDG+P +G +W DA++Q L L A KLA+ LK
Sbjct: 88 DITSFGCLFAIFNIEIFKKKKIDVVLHDGAPRMGTSWTRDAFNQNDLALNAFKLATCCLK 147
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
+ GWFVTK+F S + L+ + F+++ KP ASRK S+E +++C+++I P K+D
Sbjct: 148 KKGWFVTKIFCSGNIHGFLFALRFFFKKIFVCKPIASRKTSSETYLICKNFIVPFKIDKA 207
Query: 121 FFDPKYAF 128
D KY F
Sbjct: 208 ILDKKYLF 215
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 37/41 (90%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
+RSRAAFKLI+LN+KF+FL ++ +DLCAAPGGW+QVA++
Sbjct: 20 FRSRAAFKLIELNKKFKFLNHAESVLDLCAAPGGWLQVARK 60
>gi|269861051|ref|XP_002650241.1| 23S rRNA methylase [Enterocytozoon bieneusi H348]
gi|220066331|gb|EED43817.1| 23S rRNA methylase [Enterocytozoon bieneusi H348]
Length = 556
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT +CR + L K D+V+HDG+PN G + D + Q L L ALKLA+ LK
Sbjct: 89 DITTQECRRELICLLDNNKADIVVHDGAPNFGNDPSKDIFIQNDLVLSALKLATEFLKTN 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+ RS+++ +L + + LF+ V TKP +SR SAE + VC+ Y P ++ + F
Sbjct: 149 GIFVTKIHRSENFVKILNLLRSLFKHVTITKPLSSRTTSAETYAVCRLYKNPDTIEPRLF 208
Query: 123 DPKYAF 128
D Y F
Sbjct: 209 DANYLF 214
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYRSRAAFKL++LN+K+ FL+ ++ +DLCAAPGGW+Q+ Q M
Sbjct: 19 RGYRSRAAFKLLELNKKYNFLKDCRIAIDLCAAPGGWLQILMQEM 63
>gi|402587925|gb|EJW81859.1| hypothetical protein WUBG_07234 [Wuchereria bancrofti]
Length = 186
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+K R + +EL W+ D VLHDG+PNVG NWV DA+ Q CLTL AL+LA+ IL +
Sbjct: 92 DITTEKTRQMVRKELHGWEADCVLHDGAPNVGRNWVQDAFQQNCLTLSALRLATQILTKN 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHS 91
G FVTK+FRS DY L+ +F++LF++V++
Sbjct: 152 GIFVTKIFRSSDYCHLISVFEKLFKQVNN 180
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAAFKL+QLN++FEFLQKS+ VDLCAAPGGW+QVA QNM SS+ D +K
Sbjct: 23 GYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVAIQNMPVSSLCIGVDLVPIKP 82
Query: 249 PSTTVEIQECCKDIRV-LGRKDVRNLLKWWK---VLHD 282
+ V +Q DI R+ VR L W+ VLHD
Sbjct: 83 INKCVTLQ---GDITTEKTRQMVRKELHGWEADCVLHD 117
>gi|160331225|ref|XP_001712320.1| sbp1 [Hemiselmis andersenii]
gi|159765767|gb|ABW97995.1| sbp1 [Hemiselmis andersenii]
Length = 317
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 4/129 (3%)
Query: 3 DITTDKCRIAITRELKTWK---VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DIT+ C I + LK WK +DVVLHDG+P G +WV DA +Q L+L A KLA +
Sbjct: 88 DITSRGCLEPILK-LKNWKNKRLDVVLHDGAPRTGTSWVRDALNQNSLSLNAFKLAVNCI 146
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
++GGWFV+K+F S ++ LL++ + F+++ KP+ASR SAE +++C+ + P KLD
Sbjct: 147 EKGGWFVSKIFCSGNFHGLLFVLRFFFKKIKIFKPRASRLTSAETYLICKDFFLPTKLDQ 206
Query: 120 KFFDPKYAF 128
K+ F
Sbjct: 207 NLLKGKFIF 215
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+RSRAAFKLI+LN+KF FL KS+ +DLCAAPGGW+QV ++ + S+I
Sbjct: 20 FRSRAAFKLIELNQKFRFLDKSRGVLDLCAAPGGWLQVVQKVVSPGSLI 68
>gi|358341787|dbj|GAA49378.1| AdoMet-dependent rRNA methyltransferase SPB1 [Clonorchis sinensis]
Length = 119
Score = 102 bits (253), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 48 TLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
T+ A LA+ +L+ GGWF+TKVFRS+DY W+ F+ V + KP+ASR ESAEIF+V
Sbjct: 15 TVKAFALATDVLRPGGWFITKVFRSRDYEPFKWVLSHFFRTVRAVKPEASRMESAEIFLV 74
Query: 108 CQHYIAPAKLDTKFFDPKYAFKEL 131
QHY AP ++D +F DP++ F E+
Sbjct: 75 GQHYRAPDRIDHRFLDPRHVFGEV 98
>gi|330038977|ref|XP_003239752.1| SAM-dependent methyltransferase [Cryptomonas paramecium]
gi|327206677|gb|AEA38854.1| SAM-dependent methyltransferase [Cryptomonas paramecium]
Length = 297
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 3 DITTDKCRIAITRELKTWKV--DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
DIT+ C ++ + +K + + +++LHDGSP + W+ D Y Q L L A K +L
Sbjct: 89 DITSYYCFNSVLKIIKNFGLTFNIILHDGSPRAEIKWLSDVYKQNKLVLYAFKFTHKMLC 148
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
GWFVTK+F+SK + LL+ K F ++ KP ASRKES EI+++C+ +I +D K
Sbjct: 149 PNGWFVTKIFKSKYFNGLLFFLKSYFGKIFILKPIASRKESVEIYIICKKFI----IDKK 204
Query: 121 FFDPKYAFKELGAEDGKLNALKKK 144
F+ + K N LK K
Sbjct: 205 NFNLNIKSNRMSNYSEKFNCLKIK 228
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 34/41 (82%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
+RSRAAFKLI+++ KF F +K+ +DLC+APG WMQV+++
Sbjct: 21 FRSRAAFKLIEIDNKFHFFKKAVGVLDLCSAPGSWMQVSRK 61
>gi|222632590|gb|EEE64722.1| hypothetical protein OsJ_19578 [Oryza sativa Japonica Group]
Length = 719
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + A++LA+
Sbjct: 35 EDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLATMF 94
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQL 85
L G F+TKVFRS+DY ++++ KQ+
Sbjct: 95 LAPKGAFITKVFRSQDYNAIMYCLKQV 121
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 489 EINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
EI+ RP +KV EAKARKK+ +++DK ++K + + + D+++ K + I
Sbjct: 587 EIDARPAKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINEQSKRKMI 636
>gi|162605884|ref|XP_001713457.1| SAM-dependent methyltransferase [Guillardia theta]
gi|13794389|gb|AAK39766.1|AF083031_123 SAM-dependent methyltransferase [Guillardia theta]
Length = 288
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K ++L+DGSP +G W DAY+Q L L L++ LK GWF+TK+FRS+++ +L+
Sbjct: 104 KFCIILNDGSPKMGTFWNRDAYNQNILVLYCLRIIRLFLKNNGWFITKIFRSENFNKILF 163
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ K +F++V KP++SR SAEI+++C+ +
Sbjct: 164 VVKNMFEKVFIKKPKSSRPNSAEIYLICKKF 194
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 191 RSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
RSRAAFKL+ LN KF F +KS+ +DLC+APGGW+Q+ +
Sbjct: 17 RSRAAFKLLHLNDKFNFFKKSRSILDLCSAPGGWLQMCR 55
>gi|218197285|gb|EEC79712.1| hypothetical protein OsI_21019 [Oryza sativa Indica Group]
Length = 868
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 2 EDITTDKCRIAITRELKTWKV---DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGI 58
EDITT KCR A+ R + + V DVVLHDGSPNVG W +A Q L + A++LA+
Sbjct: 89 EDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLATMF 148
Query: 59 LKEGGWFVTKVFRSKDYTSLLWIFKQL 85
L G F+TKVFRS+DY ++++ KQ+
Sbjct: 149 LAPKGAFITKVFRSQDYNAIMYCLKQV 175
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 35/41 (85%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+GYRSRAAFKL+QL+ +F FL ++ +DLCAAPGGW+QVA
Sbjct: 20 QGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA 60
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 480 VNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
V R + EI+ RP +KV EAKARKK+ +++DK ++K + + + D+++ K + I
Sbjct: 597 VAAMRAQFKEIDARPAKKVAEAKARKKRVAMKKLDKARQKADAIADQNDINEQSKRKMI 655
>gi|298400955|gb|ADI81797.1| cell division protein [Heliconius cydno cordula]
gi|298400957|gb|ADI81798.1| cell division protein [Heliconius cydno cordula]
gi|298400961|gb|ADI81800.1| cell division protein [Heliconius cydno cordula]
gi|298400969|gb|ADI81804.1| cell division protein [Heliconius cydno cordula]
gi|298400971|gb|ADI81805.1| cell division protein [Heliconius cydno cordula]
Length = 273
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 92 DITKNSTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 152 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 17 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 55
>gi|298400883|gb|ADI81761.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + ILKEG
Sbjct: 92 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHILKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 152 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 17 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 55
>gi|258617564|gb|ACV83779.1| cell division-like protein [Heliconius melpomene]
Length = 292
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 95 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 155 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 214
Query: 123 DP 124
+P
Sbjct: 215 NP 216
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 58
>gi|298400869|gb|ADI81754.1| cell division protein [Heliconius melpomene melpomene]
gi|298400871|gb|ADI81755.1| cell division protein [Heliconius melpomene melpomene]
gi|298400873|gb|ADI81756.1| cell division protein [Heliconius melpomene melpomene]
gi|298400877|gb|ADI81758.1| cell division protein [Heliconius melpomene melpomene]
gi|298400879|gb|ADI81759.1| cell division protein [Heliconius melpomene melpomene]
gi|298400881|gb|ADI81760.1| cell division protein [Heliconius melpomene melpomene]
gi|298400885|gb|ADI81762.1| cell division protein [Heliconius melpomene melpomene]
gi|298400887|gb|ADI81763.1| cell division protein [Heliconius melpomene melpomene]
gi|298400889|gb|ADI81764.1| cell division protein [Heliconius melpomene melpomene]
gi|298400893|gb|ADI81766.1| cell division protein [Heliconius melpomene melpomene]
gi|298400897|gb|ADI81768.1| cell division protein [Heliconius melpomene melpomene]
gi|298400899|gb|ADI81769.1| cell division protein [Heliconius melpomene melpomene]
gi|298400901|gb|ADI81770.1| cell division protein [Heliconius melpomene melpomene]
gi|298400903|gb|ADI81771.1| cell division protein [Heliconius melpomene melpomene]
gi|298400905|gb|ADI81772.1| cell division protein [Heliconius melpomene melpomene]
gi|298400907|gb|ADI81773.1| cell division protein [Heliconius melpomene melpomene]
gi|298400909|gb|ADI81774.1| cell division protein [Heliconius heurippa]
gi|298400911|gb|ADI81775.1| cell division protein [Heliconius heurippa]
gi|298400913|gb|ADI81776.1| cell division protein [Heliconius heurippa]
gi|298400915|gb|ADI81777.1| cell division protein [Heliconius heurippa]
gi|298400917|gb|ADI81778.1| cell division protein [Heliconius heurippa]
gi|298400919|gb|ADI81779.1| cell division protein [Heliconius heurippa]
gi|298400921|gb|ADI81780.1| cell division protein [Heliconius heurippa]
gi|298400923|gb|ADI81781.1| cell division protein [Heliconius heurippa]
gi|298400925|gb|ADI81782.1| cell division protein [Heliconius heurippa]
gi|298400927|gb|ADI81783.1| cell division protein [Heliconius heurippa]
gi|298400929|gb|ADI81784.1| cell division protein [Heliconius heurippa]
gi|298400931|gb|ADI81785.1| cell division protein [Heliconius heurippa]
gi|298400933|gb|ADI81786.1| cell division protein [Heliconius heurippa]
gi|298400935|gb|ADI81787.1| cell division protein [Heliconius heurippa]
gi|298400937|gb|ADI81788.1| cell division protein [Heliconius heurippa]
gi|298400939|gb|ADI81789.1| cell division protein [Heliconius heurippa]
gi|298400941|gb|ADI81790.1| cell division protein [Heliconius heurippa]
gi|298400943|gb|ADI81791.1| cell division protein [Heliconius heurippa]
gi|298400945|gb|ADI81792.1| cell division protein [Heliconius heurippa]
gi|298400947|gb|ADI81793.1| cell division protein [Heliconius heurippa]
gi|298400949|gb|ADI81794.1| cell division protein [Heliconius cydno cordula]
gi|298400951|gb|ADI81795.1| cell division protein [Heliconius cydno cordula]
gi|298400953|gb|ADI81796.1| cell division protein [Heliconius cydno cordula]
gi|298400959|gb|ADI81799.1| cell division protein [Heliconius cydno cordula]
gi|298400963|gb|ADI81801.1| cell division protein [Heliconius cydno cordula]
gi|298400965|gb|ADI81802.1| cell division protein [Heliconius cydno cordula]
gi|298400967|gb|ADI81803.1| cell division protein [Heliconius cydno cordula]
gi|298400973|gb|ADI81806.1| cell division protein [Heliconius cydno cordula]
gi|298400975|gb|ADI81807.1| cell division protein [Heliconius cydno cordula]
gi|298400977|gb|ADI81808.1| cell division protein [Heliconius cydno cordula]
gi|298400979|gb|ADI81809.1| cell division protein [Heliconius cydno cordula]
gi|298400981|gb|ADI81810.1| cell division protein [Heliconius cydno cordula]
gi|298400983|gb|ADI81811.1| cell division protein [Heliconius cydno cordula]
gi|298400985|gb|ADI81812.1| cell division protein [Heliconius cydno cordula]
gi|298400987|gb|ADI81813.1| cell division protein [Heliconius cydno cordula]
Length = 273
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 92 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 152 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 17 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 55
>gi|298400891|gb|ADI81765.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 92 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 152 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 17 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 55
>gi|290974158|ref|XP_002669813.1| predicted protein [Naegleria gruberi]
gi|284083365|gb|EFC37069.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT++K I K K +V+ DG+P+V GM+ + D Y Q L L AL + S +L+E
Sbjct: 87 DITSEKTAEEIVHHFKGKKAQLVVCDGAPDVTGMHDI-DEYIQLQLILAALNITSHVLEE 145
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FV+K+FR KD T L F+RV+ KP++SR S E FVVC+ + P +
Sbjct: 146 GGSFVSKIFRGKDITLLYSQCSIFFERVYCAKPKSSRNSSLESFVVCKGFKLPKNYIPRM 205
Query: 122 FDPKYAFK 129
DP F+
Sbjct: 206 VDPLLDFQ 213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV +Q
Sbjct: 20 GWRARSAFKLLQVDEEFNIFENVKRAVDLCAAPGSWSQVLQQ 61
>gi|262094407|gb|ACY09333.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 83 DITKISTXHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDXTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYXAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|298400875|gb|ADI81757.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 92 DITKISTAHEIIQEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 152 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 17 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 55
>gi|298400895|gb|ADI81767.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 92 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 152 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 17 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 55
>gi|262094425|gb|ACY09342.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 83 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDVTLLYSQLKLFFDHVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|328867319|gb|EGG15702.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 254
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + IT + + D+V+ DG+P+V D Y Q L L AL + + IL+ G
Sbjct: 94 DITKLETALEITNQFDGKQADLVVSDGAPDVTGLHDIDFYGQSQLILAALNITTHILRPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+F+ D T + + F+ V KP++SR S E FV+CQHY P
Sbjct: 154 GCFVAKMFKGNDMTLMYNQLRVFFRSVQFVKPKSSRNSSLEAFVLCQHYYPPTDFKPTMI 213
Query: 123 DPKY-AFKEL 131
DP ++KEL
Sbjct: 214 DPVIDSYKEL 223
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQ 226
GYR+R+AFKL+Q++ + + K VDLCAAPG W Q
Sbjct: 20 GYRARSAFKLLQIDDDYNIFEGVKRVVDLCAAPGSWSQ 57
>gi|345097071|gb|AEN68037.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHXIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|262094385|gb|ACY09322.1| cell division protein [Heliconius melpomene rosina]
gi|262094435|gb|ACY09347.1| cell division protein [Heliconius melpomene rosina]
Length = 253
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 83 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDVTLLYSQLKLFFDXVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|345097009|gb|AEN68006.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKXFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|262094409|gb|ACY09334.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 83 DITKISTAHEIXKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|262094381|gb|ACY09320.1| cell division protein [Heliconius melpomene rosina]
gi|262094383|gb|ACY09321.1| cell division protein [Heliconius melpomene rosina]
gi|262094387|gb|ACY09323.1| cell division protein [Heliconius melpomene rosina]
gi|262094389|gb|ACY09324.1| cell division protein [Heliconius melpomene rosina]
gi|262094391|gb|ACY09325.1| cell division protein [Heliconius melpomene rosina]
gi|262094393|gb|ACY09326.1| cell division protein [Heliconius melpomene rosina]
gi|262094395|gb|ACY09327.1| cell division protein [Heliconius melpomene rosina]
gi|262094397|gb|ACY09328.1| cell division protein [Heliconius melpomene rosina]
gi|262094399|gb|ACY09329.1| cell division protein [Heliconius melpomene melpomene]
gi|262094403|gb|ACY09331.1| cell division protein [Heliconius melpomene melpomene]
gi|262094405|gb|ACY09332.1| cell division protein [Heliconius melpomene melpomene]
gi|262094411|gb|ACY09335.1| cell division protein [Heliconius melpomene melpomene]
gi|262094415|gb|ACY09337.1| cell division protein [Heliconius melpomene melpomene]
gi|262094417|gb|ACY09338.1| cell division protein [Heliconius melpomene melpomene]
gi|262094419|gb|ACY09339.1| cell division protein [Heliconius melpomene melpomene]
gi|262094421|gb|ACY09340.1| cell division protein [Heliconius melpomene melpomene]
gi|262094423|gb|ACY09341.1| cell division protein [Heliconius melpomene melpomene]
gi|262094427|gb|ACY09343.1| cell division protein [Heliconius melpomene rosina]
gi|262094429|gb|ACY09344.1| cell division protein [Heliconius melpomene rosina]
gi|262094431|gb|ACY09345.1| cell division protein [Heliconius melpomene rosina]
gi|262094433|gb|ACY09346.1| cell division protein [Heliconius melpomene rosina]
Length = 253
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 83 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|345097003|gb|AEN68003.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|345097019|gb|AEN68011.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|345097041|gb|AEN68022.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|345096993|gb|AEN67998.1| cell division protein [Heliconius numata arcuella]
gi|345096997|gb|AEN68000.1| cell division protein [Heliconius numata aurora]
gi|345096999|gb|AEN68001.1| cell division protein [Heliconius numata aurora]
gi|345097001|gb|AEN68002.1| cell division protein [Heliconius numata aurora]
gi|345097007|gb|AEN68005.1| cell division protein [Heliconius numata aurora]
gi|345097021|gb|AEN68012.1| cell division protein [Heliconius numata aurora]
gi|345097027|gb|AEN68015.1| cell division protein [Heliconius numata aurora]
gi|345097031|gb|AEN68017.1| cell division protein [Heliconius numata aurora]
gi|345097033|gb|AEN68018.1| cell division protein [Heliconius numata aurora]
gi|345097037|gb|AEN68020.1| cell division protein [Heliconius numata silvana]
gi|345097039|gb|AEN68021.1| cell division protein [Heliconius numata silvana]
gi|345097043|gb|AEN68023.1| cell division protein [Heliconius numata silvana]
gi|345097045|gb|AEN68024.1| cell division protein [Heliconius numata silvana]
gi|345097047|gb|AEN68025.1| cell division protein [Heliconius numata silvana]
gi|345097051|gb|AEN68027.1| cell division protein [Heliconius numata silvana]
gi|345097057|gb|AEN68030.1| cell division protein [Heliconius numata silvana]
gi|345097059|gb|AEN68031.1| cell division protein [Heliconius numata silvana]
gi|345097069|gb|AEN68036.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|345097011|gb|AEN68007.1| cell division protein [Heliconius numata aurora]
Length = 245
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 79 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 138
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 139 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 198
Query: 123 DP 124
+P
Sbjct: 199 NP 200
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 4 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 42
>gi|345097065|gb|AEN68034.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYXIFEGVLRAVDLCAAPGSWSQV 44
>gi|345097049|gb|AEN68026.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|345097029|gb|AEN68016.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|262094401|gb|ACY09330.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + LKEG
Sbjct: 83 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHXLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYXAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|66504555|ref|XP_392223.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Apis mellifera]
Length = 370
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 64/133 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + ILK+G
Sbjct: 101 DITNIDTAKQIISHFDNEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILKQG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L K F V+ TKP +SR S E FVVC+ Y P
Sbjct: 161 GTFVAKIFRAKDVTLLYAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHMM 220
Query: 123 DPKYAFKELGAED 135
+P K D
Sbjct: 221 NPLLTHKPCDFND 233
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ + L VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVLSRRL 63
>gi|350427390|ref|XP_003494742.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Bombus
impatiens]
Length = 369
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + IL++G
Sbjct: 101 DITNINTAKQIISHFDNEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRKG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L K F V+ TKP +SR S E FVVC+ Y P +
Sbjct: 161 GTFVAKIFRAKDVTLLYAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYEPHML 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ + L VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQV 58
>gi|345097005|gb|AEN68004.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|412989217|emb|CCO15808.1| cell division protein [Bathycoccus prasinos]
Length = 306
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT C I E + K D+++ DG+P+V D + Q L L LK+ + +LKEG
Sbjct: 108 DITNVDCMRQIISEFEGEKADLIVGDGAPDVTGLHDLDEFMQAQLILAGLKVCAHVLKEG 167
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G +V K+FR KD L K F +V KP++SR S E FVVC++Y P
Sbjct: 168 GTYVAKIFRGKDIGLLYNQLKCFFPKVTCAKPKSSRNSSIEAFVVCENYSPP 219
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 189 GYRSRAAFKLIQLNRKFE-FLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKLIQ++ F F + K VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLIQIDESFHLFKENVKNVVDLCAAPGSWSQVLSRKLYLPTL 69
>gi|340710517|ref|XP_003393834.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Bombus terrestris]
Length = 369
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + IL++G
Sbjct: 101 DITNINTAKQIISHFDNEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L K F V+ TKP +SR S E FVVC+ Y P +
Sbjct: 161 GTFVAKIFRAKDVTLLYAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYEPHML 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ + L VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVLSRRL 63
>gi|348523419|ref|XP_003449221.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Oreochromis niloticus]
Length = 313
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR KD T L K F V TKP++SR S E FVVCQ+Y P
Sbjct: 153 GGTFVAKIFRGKDVTLLYSQLKLFFNGVTCTKPRSSRNSSIEAFVVCQNYSPP 205
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS------IIHFDD 242
G+R+R+AFKL+QL+++F VDLCAAPG W QV + + I+ D
Sbjct: 20 GWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVLSRKLRGGESGEEVKIVAVDL 79
Query: 243 ESVLKHPSTT 252
+++ P T
Sbjct: 80 QAMAPLPGVT 89
>gi|340710519|ref|XP_003393835.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
2 [Bombus terrestris]
Length = 365
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + IL++G
Sbjct: 97 DITNINTAKQIISHFDNEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L K F V+ TKP +SR S E FVVC+ Y P +
Sbjct: 157 GTFVAKIFRAKDVTLLYAQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYEPHML 216
Query: 123 DP 124
+P
Sbjct: 217 NP 218
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ + L VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVLSRRL 63
>gi|348523421|ref|XP_003449222.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
2 [Oreochromis niloticus]
Length = 309
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 90 DITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 148
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR KD T L K F V TKP++SR S E FVVCQ+Y P
Sbjct: 149 GGTFVAKIFRGKDVTLLYSQLKLFFNGVTCTKPRSSRNSSIEAFVVCQNYSPP 201
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS--SIIHFDDESVL 246
G+R+R+AFKL+QL+++F VDLCAAPG W QV + + I+ D +++
Sbjct: 20 GWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVLSRKLSGEEVKIVAVDLQAMA 79
Query: 247 KHPSTT 252
P T
Sbjct: 80 PLPGVT 85
>gi|262094413|gb|ACY09336.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + LKEG
Sbjct: 83 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHXLKEG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 143 GVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 202
Query: 123 DP 124
+P
Sbjct: 203 NP 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 8 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 46
>gi|67522589|ref|XP_659355.1| hypothetical protein AN1751.2 [Aspergillus nidulans FGSC A4]
gi|40744881|gb|EAA64037.1| hypothetical protein AN1751.2 [Aspergillus nidulans FGSC A4]
Length = 420
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 175 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRDRDVDLLYSQ 234
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+ +F+RV KP++SR S E F+VC+ +I PA DT
Sbjct: 235 LRTVFERVSVAKPRSSRASSLEAFIVCEGFIPPAIHDT 272
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|357604421|gb|EHJ64181.1| cell division-like protein [Danaus plexippus]
Length = 292
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 95 DITKISTANEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T + K F+ V +KP++SR S E FV+CQ+Y P
Sbjct: 155 GVFVAKIFRGKDVTLVYSQLKLFFEFVTVSKPRSSRNSSIEAFVICQNYSPPPGYVPTMI 214
Query: 123 DP 124
+P
Sbjct: 215 NP 216
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQINEEHNIFNGVLRAVDLCAAPGSWSQV 58
>gi|322796151|gb|EFZ18727.1| hypothetical protein SINV_05439 [Solenopsis invicta]
Length = 359
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D + Q L L AL +A+ IL+ G
Sbjct: 101 DITNTNTAKEIIAHFDNTRADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNIATHILRPG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L + F V+ TKP +SR S E FVVC+ Y P
Sbjct: 161 GTFVAKIFRAKDVTFLYAQLRIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPESYTPNML 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQIDSECHIFDGVSKAVDLCAAPGSWSQV 58
>gi|345097015|gb|AEN68009.1| cell division protein [Heliconius numata aurora]
gi|345097017|gb|AEN68010.1| cell division protein [Heliconius numata aurora]
gi|345097035|gb|AEN68019.1| cell division protein [Heliconius numata silvana]
gi|345097055|gb|AEN68029.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLXADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|432950609|ref|XP_004084525.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Oryzias
latipes]
Length = 310
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKVSTAQEIIRHFEGQAADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
GG FV K+FR KD T L K F RV KP++SR S E FVVCQ Y PA
Sbjct: 153 GGTFVAKIFRGKDVTLLYSQLKIFFSRVTCAKPRSSRNSSIESFVVCQRYSPPA 206
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QL+++F VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLDQEFNLFTGVSRAVDLCAAPGSWSQVLSRKL 63
>gi|383853658|ref|XP_003702339.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Megachile rotundata]
Length = 369
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 62/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D+V+ DG+P+V D Y Q L L AL + + IL++G
Sbjct: 101 DITNTKTAEQIIAHFDNEHADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD + L K F V+ TKP +SR S E FVVC+ Y P
Sbjct: 161 GTFVAKIFRAKDVSLLYSQLKIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHML 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ + L VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDNECHILDGVSKAVDLCAAPGSWSQVLSRRL 63
>gi|270009490|gb|EFA05938.1| hypothetical protein TcasGA2_TC008754 [Tribolium castaneum]
Length = 460
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K AI + D+V+ DG+P+V D Y Q L LGAL + +LK G
Sbjct: 138 DITEYKTAEAIISHFEGDHADLVVCDGAPDVTGLHCIDIYIQAQLLLGALHITCNVLKPG 197
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD L LF+ V + KP +SR S E FVVC+ + P D
Sbjct: 198 GTFVAKIFRAKDCDLLTQQLLMLFEDVITVKPTSSRNSSIEAFVVCRKFKPPKGFDPMLI 257
Query: 123 DP 124
P
Sbjct: 258 TP 259
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q++ KF L+ VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLLQIDEKFNILEGVTKAVDLCAAPGSWSQVLSRRL 63
>gi|259487095|tpe|CBF85494.1| TPA: tRNA methyltransferase, putative (AFU_orthologue;
AFUA_6G08910) [Aspergillus nidulans FGSC A4]
Length = 420
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 175 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRDRDVDLLYSQ 234
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+ +F+RV KP++SR S E F+VC+ +I PA DT
Sbjct: 235 LRTVFERVSVAKPRSSRASSLEAFIVCEGFIPPAIHDT 272
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|402589089|gb|EJW83021.1| cell division protein [Wuchereria bancrofti]
Length = 348
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I L+ K D+V+ DG+P+V D Y Q L L AL +A+ +LKE
Sbjct: 97 DITEACTAKKIISYLEGSKADLVICDGAPDVTGLHALDEYMQSQLVLAALNIATFVLKEA 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR++D T L K F+ V+ KP++SR+ S E FVVC + P +
Sbjct: 157 GTFVAKIFRARDITLLYAQLKIFFKEVYCAKPRSSRQSSCEAFVVCNGFSLPKRYTPTMK 216
Query: 123 DP 124
+P
Sbjct: 217 NP 218
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ +F + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLMQIDDEFNIFEGVHRVVDLCAAPGSWSQV 58
>gi|402466053|gb|EJW01631.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Edhazardia aedis
USNM 41457]
Length = 264
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDITT++C+ I +K K+D++L DG+P+V D YHQ L AL + + I K
Sbjct: 88 EDITTEECKEKIFEIVKD-KIDLILFDGAPDVTGIIDIDEYHQTVLLKEALAITAKIAKV 146
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K FRS+D ++ FK F+ V KP+ SR S E F++CQ + + +D +F
Sbjct: 147 GATFVGKCFRSEDTGYIIKHFKNFFKTVKLLKPKTSRNSSHECFLLCQDFFV-SNVDPRF 205
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGYPSDVNVLYKN---LPVSKFIEHETPTV 178
D ++ + + G SD++ LY N +PV K ++ V
Sbjct: 206 MD--------------VDCEPEPNIIIDCGFGPNSDLSTLYYNTSEIPVFKPLDPPYEAV 251
Query: 179 LLQHATE 185
+ Q E
Sbjct: 252 IKQRRAE 258
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KLIQ++++++ VDLC+APG W QV Q +
Sbjct: 20 GYRARSAYKLIQIDQEYDLFNGVNSVVDLCSAPGSWSQVCAQKI 63
>gi|345097061|gb|AEN68032.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKE
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKES 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|393908901|gb|EFO23015.2| hypothetical protein LOAG_05470 [Loa loa]
Length = 351
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL +A+ +LKE
Sbjct: 97 DITETSTAEKIISYFEGLKADLVVCDGAPDVTGLHALDEYMQSQLVLAALNIATFVLKET 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR++D T L K F+ V+ KP++SR+ S E FVVC+ + P
Sbjct: 157 GTFVAKVFRARDITLLYAQLKIFFKEVYCAKPRSSRQSSCEAFVVCKEFNLP 208
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ +F + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLMQIDDEFNIFENVHRVVDLCAAPGSWSQV 58
>gi|312076873|ref|XP_003141055.1| hypothetical protein LOAG_05470 [Loa loa]
Length = 335
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL +A+ +LKE
Sbjct: 81 DITETSTAEKIISYFEGLKADLVVCDGAPDVTGLHALDEYMQSQLVLAALNIATFVLKET 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR++D T L K F+ V+ KP++SR+ S E FVVC+ + P
Sbjct: 141 GTFVAKVFRARDITLLYAQLKIFFKEVYCAKPRSSRQSSCEAFVVCKEFNLP 192
>gi|345096995|gb|AEN67999.1| cell division protein [Heliconius numata arcuella]
gi|345097025|gb|AEN68014.1| cell division protein [Heliconius numata aurora]
gi|345097063|gb|AEN68033.1| cell division protein [Heliconius numata silvana]
gi|345097067|gb|AEN68035.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + K D+V+ DG+P+V D Y Q L L AL + + +LKE
Sbjct: 81 DITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEX 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|332025843|gb|EGI65999.1| Putative ribosomal RNA methyltransferase 1 [Acromyrmex echinatior]
Length = 397
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D + Q L L AL +A+ IL+ G
Sbjct: 101 DITNSSTAEQIIAYFDNSRADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNIATYILRPG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD + L + F V+ TKP +SR S E FVVC+ Y P +
Sbjct: 161 GTFVAKIFRAKDVSLLYAQLRIFFPYVYCTKPSSSRNSSIEAFVVCKDYSQPEGYEPNML 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
+G+R+R+AFKL+Q++ + VDLCAAPG W QV
Sbjct: 19 EGWRARSAFKLLQIDSECHIFDGVSKAVDLCAAPGSWSQV 58
>gi|255932265|ref|XP_002557689.1| Pc12g08590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582308|emb|CAP80486.1| Pc12g08590 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 435
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 184 VDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLAMGVLRPGGKFVAKIFRGRDVDLLYAQ 243
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP---------AKLDTKFFDPKYAFKELG 132
+ +F+RV KP++SR S E FVVC+ +I P A L F A +
Sbjct: 244 LRTVFERVSVAKPRSSRASSLEAFVVCEGFIPPVSDSGVVGMAALKNPLFGGAAAPVAV- 302
Query: 133 AEDGKLNALKKKQVEK 148
+EDG + +++++K
Sbjct: 303 SEDGNVGVEVREEIDK 318
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDERFDLFEHENPDNVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|380026219|ref|XP_003696852.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase 1-like [Apis florea]
Length = 369
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 61/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + IL++G
Sbjct: 101 DITNIDTAKQIISHFDNEQADLVVCDGAPDVTGLHDMDIYIQSQLLLAALNITTHILRQG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L K F V+ T P +SR S E FVVC+ Y P
Sbjct: 161 GTFVAKIFRAKDVTLLYAQLKIFFPYVYCTXPSSSRNSSIEAFVVCKDYSPPEGYKPHMM 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ + L VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVLSRRL 63
>gi|307208282|gb|EFN85714.1| Putative ribosomal RNA methyltransferase 1 [Harpegnathos saltator]
Length = 361
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D + Q L L AL + + IL+ G
Sbjct: 102 DITNTNTAKEIIAHFDNTQADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNITTHILRPG 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD T L + F V+ KP +SR S E FVVC++Y P +
Sbjct: 162 GTFVAKIFRAKDVTFLYAQLRIFFSYVYCAKPSSSRNSSIEAFVVCKNYSPPEGYEPHML 221
Query: 123 DP 124
+P
Sbjct: 222 NP 223
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++++ +DLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQIDQECRIFNGVSKTIDLCAAPGSWSQV 58
>gi|425778250|gb|EKV16390.1| TRNA methyltransferase, putative [Penicillium digitatum Pd1]
gi|425780470|gb|EKV18476.1| TRNA methyltransferase, putative [Penicillium digitatum PHI26]
Length = 431
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 184 VDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLAMGVLRPGGKFVAKIFRGRDVDILYAQ 243
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP---------AKLDTKFFDPKYAFKELG 132
+ +F+RV KP++SR S E FVVC+ +I P A L F A +
Sbjct: 244 LRTVFERVSVAKPRSSRASSLEAFVVCEGFIPPVSDSGVVGMAALKNPLFGGAVAPAAV- 302
Query: 133 AEDGKLNALKKKQVEK 148
+EDG + ++++++
Sbjct: 303 SEDGNVGVEVREEIDQ 318
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDERFDLFEHENPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|302510170|ref|XP_003017045.1| hypothetical protein ARB_05339 [Arthroderma benhamiae CBS 112371]
gi|291180615|gb|EFE36400.1| hypothetical protein ARB_05339 [Arthroderma benhamiae CBS 112371]
Length = 309
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVD+VL DG+P+V D Y Q L AL LA GIL+ GG FV K+FR +D L
Sbjct: 143 KVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMGILRPGGTFVAKIFRGRDVDVLYA 202
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K +F RV KP++SR S E FVVC+ Y
Sbjct: 203 QLKSVFGRVVVAKPRSSRASSLEAFVVCRDY 233
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKS-----KVCVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLI L+ +F+ S + VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGSWSQVLSRVLI 69
>gi|428176350|gb|EKX45235.1| hypothetical protein GUITHDRAFT_157875 [Guillardia theta CCMP2712]
Length = 294
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + K D+V+ DG+P+V D Y Q L L AL + + +L+ G
Sbjct: 92 DITSSVVADKIVQLFDGQKADIVVSDGAPDVTGLHDIDEYVQSQLLLSALNITTVLLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAK----LD 118
G FV K+FR KD T L K F V KP++SR S E F+VC+ Y PA LD
Sbjct: 152 GSFVAKIFRGKDVTLLYSQLKIFFPFVTCAKPKSSRNSSIESFIVCKGYCPPAGYIPCLD 211
Query: 119 TKFFDPKYA 127
D KY
Sbjct: 212 KPLLDFKYG 220
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QL+ +F+ L+ VDLCAAPG W QV + +
Sbjct: 20 GFRARSAFKLLQLDEEFKLLEGVNRVVDLCAAPGSWSQVISRQL 63
>gi|380811280|gb|AFE77515.1| putative ribosomal RNA methyltransferase 1 isoform b [Macaca
mulatta]
gi|383417199|gb|AFH31813.1| putative ribosomal RNA methyltransferase 1 isoform b [Macaca
mulatta]
Length = 327
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
Query: 118 DTKFFDPKYAFKEL 131
D Y F +L
Sbjct: 210 SKPLLDHSYDFNQL 223
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|326475211|gb|EGD99220.1| tRNA methyltransferase [Trichophyton tonsurans CBS 112818]
Length = 309
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVD+VL DG+P+V D Y Q L AL LA GIL+ GG FV K+FR +D L
Sbjct: 143 KVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMGILRPGGTFVAKIFRGRDVDVLYA 202
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K +F RV KP++SR S E FVVC+ Y
Sbjct: 203 QLKSVFGRVVVAKPRSSRASSLEAFVVCRDY 233
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKS-----KVCVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLI L+ +F+ S + VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGSWSQVLSRVLI 69
>gi|119193911|ref|XP_001247559.1| hypothetical protein CIMG_01330 [Coccidioides immitis RS]
gi|392863200|gb|EAS36076.2| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Coccidioides immitis
RS]
Length = 380
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VDVVL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 188 VDVVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 247
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F++V KP++SR S E FVVC+ +I P
Sbjct: 248 LKTVFEKVSVAKPRSSRASSLEAFVVCEGFIPP 280
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|403297460|ref|XP_003939580.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Saimiri
boliviensis boliviensis]
Length = 327
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFMPDL 209
Query: 118 DTKFFDPKYAFKEL 131
D Y F +L
Sbjct: 210 SKPLLDHSYDFNQL 223
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFHLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|315040654|ref|XP_003169704.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Arthroderma gypseum
CBS 118893]
gi|311345666|gb|EFR04869.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Arthroderma gypseum
CBS 118893]
Length = 316
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVD+VL DG+P+V D Y Q L AL LA GIL+ GG FV K+FR +D L
Sbjct: 150 KVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMGILRPGGTFVAKIFRGRDVDVLYA 209
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K +F RV KP++SR S E FVVC+ Y
Sbjct: 210 QLKSVFGRVVVAKPRSSRASSLEAFVVCRDY 240
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKS-----KVCVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLI L+ +F+ S + VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIHLDEEFDLFAHSNPDSVRRVVDLCAAPGSWSQVLSRVLI 69
>gi|324513843|gb|ADY45670.1| Ribosomal RNA methyltransferase [Ascaris suum]
Length = 370
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +I + K D+V+ DG+P+V D Y Q L L AL + + +LKE
Sbjct: 98 DITESSTAESIISHFEGSKADLVVCDGAPDVTGLHSLDEYMQSQLILAALNITTFVLKES 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----KLD 118
G F+ K+FR+K+ + L K F+ V+ KP++SR+ S E FVVC+ + P ++
Sbjct: 158 GTFIAKIFRAKNVSLLYAQLKFFFEEVYCAKPRSSRQSSCEAFVVCKRFHLPTGYVPTVE 217
Query: 119 TKFFDPKY 126
F P Y
Sbjct: 218 NPMFAPDY 225
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLMQIDDEFNIFEGVTRAVDLCAAPGSWSQVLSKRL 63
>gi|291222138|ref|XP_002731075.1| PREDICTED: FtsJ homolog 1-like [Saccoglossus kowalevskii]
Length = 361
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + + D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 94 DITKVSTAMEIIGHFEGEQADLVVCDGAPDVTGLHDLDEYIQAQLLLAALNITTHVLKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F +V KP++SR S E FVVC++Y P
Sbjct: 154 GTFVAKIFRGKDVTLLYSQLKIFFPKVTIAKPRSSRNSSIEAFVVCENYSPPVGYKPNMS 213
Query: 123 DP 124
+P
Sbjct: 214 NP 215
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q+N +F + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQINEEFNIFKDVSKVVDLCAAPGSWSQVLSRRL 63
>gi|114051497|ref|NP_001040360.1| cell division protein [Bombyx mori]
gi|95102628|gb|ABF51252.1| cell division protein [Bombyx mori]
Length = 298
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + AI E + K D+V+ DG+P+V D Y Q L L AL + + +LK
Sbjct: 95 DITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNE 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD + L KQ F+ V +KP++SR S E FV+C+ Y P
Sbjct: 155 GTFVAKIFRGKDVSLLYSQLKQFFKLVTVSKPRSSRNSSIEAFVICEKYNPPEDYVPNMV 214
Query: 123 DP 124
+P
Sbjct: 215 NP 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q+N ++ VDLCAAPG W QV +N+ +++
Sbjct: 20 GWRARSAFKLLQINEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQNAV 68
>gi|121699614|ref|XP_001268080.1| tRNA methyltransferase, putative [Aspergillus clavatus NRRL 1]
gi|119396222|gb|EAW06654.1| tRNA methyltransferase, putative [Aspergillus clavatus NRRL 1]
Length = 428
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 177 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQ 236
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+ +F++V KP++SR S E FVVC+ +I PA D
Sbjct: 237 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPAIHD 273
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|226288116|gb|EEH43629.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Paracoccidioides
brasiliensis Pb18]
Length = 397
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 189 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 248
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+RV KP++SR S E FVVC+ +I P
Sbjct: 249 LKTVFERVSVAKPRSSRASSLEAFVVCEGFIPP 281
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|225679098|gb|EEH17382.1| 2'-O-ribose methyltransferase [Paracoccidioides brasiliensis Pb03]
Length = 397
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 189 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 248
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+RV KP++SR S E FVVC+ +I P
Sbjct: 249 LKTVFERVSVAKPRSSRASSLEAFVVCEGFIPP 281
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|47214710|emb|CAG01063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKVTTAQEIIRHFEGQPADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR KD T L K F V KP++SR S E FVVCQ+Y P
Sbjct: 153 GGTFVAKIFRGKDVTLLYSQLKIFFTGVTCAKPRSSRNSSIEAFVVCQNYSPP 205
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA------SSIIHFDD 242
G+R+R+AFKL+QL+++F+ VDLCAAPG W QV + + + I+ D
Sbjct: 20 GWRARSAFKLLQLDQEFDLFTGVTRVVDLCAAPGSWSQVLSRKLRQDERAEEAKIVAVDL 79
Query: 243 ESVLKHPSTT 252
+++ P T
Sbjct: 80 QAMAPLPGVT 89
>gi|452823766|gb|EME30774.1| FtsJ-like methyltransferase family protein [Galdieria sulphuraria]
Length = 299
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I +E + VDVVL DG+P+V D Y Q L L AL +A+ +L++G
Sbjct: 93 DITSRPTVETILKEFENGMVDVVLSDGAPDVTGLHDLDEYIQSELILSALNVATFLLRQG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G FV KVFR KD + F+ V KP++SR S E F VC+ Y P+
Sbjct: 153 GTFVAKVFRGKDTCGVFSRLSVFFENVTLAKPRSSRNSSIEAFFVCRGYSRPS 205
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+QL+++F + ++ VDLCAAPG W QV + +
Sbjct: 20 GYRARSAYKLLQLDQEFNLFKDAENVVDLCAAPGSWSQVVSKRL 63
>gi|405971894|gb|EKC36697.1| Putative ribosomal RNA methyltransferase 1 [Crassostrea gigas]
Length = 348
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + +L+ G
Sbjct: 95 DITKKSTAQEIISHFEGEKADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLRTG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----KLD 118
G FV K+FR KD T L + F V KP++SR S E FVVCQ+Y PA +
Sbjct: 155 GTFVAKIFRGKDVTLLYSQLRIFFPLVAIFKPRSSRNSSIEAFVVCQNYSPPAGYIPNMS 214
Query: 119 TKFFDPKY 126
D KY
Sbjct: 215 NPLLDHKY 222
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q+N F + K VDLCAAPG W QV + + +
Sbjct: 20 GWRARSAFKLLQINEDFNLFEGVKKVVDLCAAPGSWSQVLARKLRGGDV 68
>gi|193785818|dbj|BAG51253.1| unnamed protein product [Homo sapiens]
Length = 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
Query: 118 DTKFFDPKYAFKEL 131
D Y F +L
Sbjct: 210 SKPLLDHSYDFNQL 223
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV + + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSRKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|29029589|ref|NP_803183.1| putative ribosomal RNA methyltransferase 1 isoform b [Homo sapiens]
gi|29029591|ref|NP_803188.1| putative ribosomal RNA methyltransferase 1 isoform b [Homo sapiens]
gi|397471351|ref|XP_003807259.1| PREDICTED: putative ribosomal RNA methyltransferase 1 isoform 2
[Pan paniscus]
gi|3511153|gb|AAC33734.1| cell division protein [Homo sapiens]
gi|119571169|gb|EAW50784.1| FtsJ homolog 1 (E. coli), isoform CRA_b [Homo sapiens]
gi|410222316|gb|JAA08377.1| FtsJ homolog 1 [Pan troglodytes]
gi|410252888|gb|JAA14411.1| FtsJ homolog 1 [Pan troglodytes]
gi|410290772|gb|JAA23986.1| FtsJ homolog 1 [Pan troglodytes]
gi|410350183|gb|JAA41695.1| FtsJ homolog 1 [Pan troglodytes]
Length = 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPEGFIPDL 209
Query: 118 DTKFFDPKYAFKEL 131
D Y F +L
Sbjct: 210 SKPLLDHSYDFNQL 223
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|307183163|gb|EFN70073.1| Putative ribosomal RNA methyltransferase 1 [Camponotus floridanus]
Length = 381
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D + Q L L AL + + IL+ G
Sbjct: 101 DITNTNTAQQIIAHFDNTQADLVVCDGAPDVTGLHDMDIFIQSQLLLAALNITTHILRPG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD + L + F V+ TKP +SR S E FVVC+ Y P
Sbjct: 161 GTFVAKIFRAKDVSFLYAQLRIFFPYVYCTKPSSSRNSSIEAFVVCKDYSPPEGYKPHML 220
Query: 123 DP 124
+P
Sbjct: 221 NP 222
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQIDTECHIFDGVSKAVDLCAAPGSWSQV 58
>gi|302659743|ref|XP_003021559.1| hypothetical protein TRV_04406 [Trichophyton verrucosum HKI 0517]
gi|291185462|gb|EFE40941.1| hypothetical protein TRV_04406 [Trichophyton verrucosum HKI 0517]
Length = 309
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVD+VL DG+P+V D Y Q L AL LA GI++ GG FV K+FR +D L
Sbjct: 143 KVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMGIIRPGGTFVAKIFRGRDVDVLYA 202
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K +F RV KP++SR S E FVVC+ Y
Sbjct: 203 QLKSVFGRVVVAKPRSSRASSLEAFVVCRDY 233
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKS-----KVCVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLI L+ +F+ S + VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGSWSQVLSRVLI 69
>gi|189239587|ref|XP_975693.2| PREDICTED: similar to Putative ribosomal RNA methyltransferase 1
(rRNA (uridine-2-O-)-methyltransferase) [Tribolium
castaneum]
Length = 360
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K AI + D+V+ DG+P+V D Y Q L LGAL + +LK G
Sbjct: 91 DITEYKTAEAIISHFEGDHADLVVCDGAPDVTGLHCIDIYIQAQLLLGALHITCNVLKPG 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD L LF+ V + KP +SR S E FVVC+ + P D
Sbjct: 151 GTFVAKIFRAKDCDLLTQQLLMLFEDVITVKPTSSRNSSIEAFVVCRKFKPPKGFDPMLI 210
Query: 123 DP 124
P
Sbjct: 211 TP 212
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
+G+R+R+AFKL+Q++ KF L+ VDLCAAPG W QV Q
Sbjct: 19 QGWRARSAFKLLQIDEKFNILEGVTKAVDLCAAPGSWSQVLSQT 62
>gi|196016828|ref|XP_002118264.1| hypothetical protein TRIADDRAFT_62287 [Trichoplax adhaerens]
gi|190579165|gb|EDV19267.1| hypothetical protein TRIADDRAFT_62287 [Trichoplax adhaerens]
Length = 313
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + K D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 99 DITSVSTANRIIDYFEGEKADLVVCDGAPDVTGQHDLDEYFQAQLLLAALNITNHVLKSG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+ K+FR KD + L + F V +KP++SR S E FVVC++Y P
Sbjct: 159 GTFIAKIFRGKDVSLLYSQLRVFFPNVTISKPRSSRNSSIEAFVVCRNYSQPEGFTPTMT 218
Query: 123 DP 124
+P
Sbjct: 219 NP 220
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ +F + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQIDEEFTIFKGVTRAVDLCAAPGSWSQV 58
>gi|224809482|ref|NP_001007385.2| FtsJ homolog 1 [Danio rerio]
Length = 323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKISTAEEIIRHFEGESADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR KD T L K F V KP +SR S E FVVCQ+Y P
Sbjct: 153 GGNFVAKIFRGKDVTLLYSQLKIFFSFVTCAKPPSSRNSSIEAFVVCQNYSPP 205
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS------IIHFDD 242
G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV + + I+ D
Sbjct: 20 GWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQVLSRKLRGKDKSEEVKIVAVDL 79
Query: 243 ESVLKHPSTTVEIQ 256
+++ P T +IQ
Sbjct: 80 QAMAPLPGVT-QIQ 92
>gi|119470072|ref|XP_001258008.1| tRNA methyltransferase, putative [Neosartorya fischeri NRRL 181]
gi|119406160|gb|EAW16111.1| tRNA methyltransferase, putative [Neosartorya fischeri NRRL 181]
Length = 426
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 178 VDLVISDGAPDVTGLHDLDIYVQSQLLYSALNLAVGVLRPGGKFVAKIFRGRDVDLIYAQ 237
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+ +F++V KP++SR S E FVVC+ +I PA D
Sbjct: 238 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPAIHD 274
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|295658670|ref|XP_002789895.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226282856|gb|EEH38422.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 395
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 187 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 246
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+RV KP++SR S E FVVC+ +I P
Sbjct: 247 LKTVFERVSVAKPRSSRASSLEAFVVCEGFIPP 279
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|261403094|ref|YP_003247318.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
vulcanius M7]
gi|261370087|gb|ACX72836.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
vulcanius M7]
Length = 248
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 5 TTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGW 64
T +K R I E K KVDVV+ D SPN+ W D L AL++A+ +LKE G
Sbjct: 102 TLNKIRELIPNEEK--KVDVVISDASPNISGYWDVDHARSIDLVTTALQIATEMLKERGN 159
Query: 65 FVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
FV KVF + + K+ F++V+ TKPQASRKESAE++V+ + Y
Sbjct: 160 FVAKVFYGDMIDDYVKLVKKYFEKVYITKPQASRKESAEVYVIAKRYTG 208
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
YRSRA+FKL+QLN KF ++ K+ +DL APGGWMQVA++
Sbjct: 26 YRSRASFKLMQLNEKFNVIKPRKIILDLGCAPGGWMQVARE 66
>gi|198428770|ref|XP_002127655.1| PREDICTED: similar to FtsJ homolog 1 [Ciona intestinalis]
Length = 322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +I + D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 97 DITNVSTAQSIISHFEGESADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKLG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L + F++V KP++SR S E FVVC++Y P
Sbjct: 157 GTFVAKIFRGKDVTLLYAQLRLFFKKVTCAKPRSSRNSSIEAFVVCENYSPPPSYIPNMS 216
Query: 123 DP 124
+P
Sbjct: 217 NP 218
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQVAKQNMMASSI 237
+G+R+R+AFKL+ L+ +F K VDLCAAPG W QV + + + +
Sbjct: 19 QGWRARSAFKLLHLDEEFNLFHNGVKKVVDLCAAPGSWSQVLSRKLRGTEV 69
>gi|346467183|gb|AEO33436.1| hypothetical protein [Amblyomma maculatum]
Length = 360
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 35 DITEVSTAQKIISHFEGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHVLKNG 94
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G ++ K+FR KD T L K F+ V KP++SR S E FVVC+HY P
Sbjct: 95 GTYIAKIFRGKDVTLLYAQLKLFFEHVTVAKPRSSRNSSIESFVVCRHYSPP 146
>gi|70991863|ref|XP_750780.1| tRNA methyltransferase [Aspergillus fumigatus Af293]
gi|66848413|gb|EAL88742.1| tRNA methyltransferase, putative [Aspergillus fumigatus Af293]
gi|159124342|gb|EDP49460.1| tRNA methyltransferase, putative [Aspergillus fumigatus A1163]
Length = 426
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 178 VDLVISDGAPDVTGLHDLDIYVQSQLLYSALNLAVGVLRPGGKFVAKIFRGRDVDLIYAQ 237
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+ +F++V KP++SR S E FVVC+ +I PA D
Sbjct: 238 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPAIHD 274
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|55250314|gb|AAH85449.1| FtsJ homolog 1 (E. coli) [Danio rerio]
gi|182890610|gb|AAI64849.1| Ftsj1 protein [Danio rerio]
Length = 323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKISTAEEIIRHFEGESADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR KD T L K F V KP +SR S E FVVCQ+Y P
Sbjct: 153 GGNFVAKIFRGKDVTLLYSQLKIFFSFVTCAKPPSSRNSSIEAFVVCQNYSPP 205
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLDEEFKLFRGVSRAVDLCAAPGSWSQVLSRKL 63
>gi|157423575|gb|AAI53565.1| FtsJ homolog 1 (E. coli) [Danio rerio]
Length = 323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKISTAEEIIRHFEGESADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR KD T L K F V KP +SR S E FVVCQ+Y P
Sbjct: 153 GGNFVAKIFRGKDVTLLYSQLKIFFSFVTCAKPPSSRNSSIEAFVVCQNYSPP 205
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQVLSRKL 63
>gi|327302420|ref|XP_003235902.1| tRNA methyltransferase [Trichophyton rubrum CBS 118892]
gi|326461244|gb|EGD86697.1| tRNA methyltransferase [Trichophyton rubrum CBS 118892]
Length = 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVD+VL DG+P+V D Y Q L AL LA GIL+ GG FV K+FR +D L
Sbjct: 175 KVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMGILRPGGTFVAKIFRGRDVDVLYA 234
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K +F RV KP++SR S E FVVC+ Y
Sbjct: 235 QLKSVFGRVVVAKPRSSRASSLEAFVVCRDY 265
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 178 VLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKS-----KVCVDLCAAPGGWMQVAKQNM 232
+LL+ V + +R+R+AFKLI L+ +F+ S + VDLCAAPG W QV + +
Sbjct: 42 LLLETGCWVEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGSWSQVLSRVL 101
Query: 233 M 233
+
Sbjct: 102 I 102
>gi|390335448|ref|XP_798087.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Strongylocentrotus purpuratus]
Length = 449
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + K D+V+ DG+P+V D Y Q L L AL + + +LK
Sbjct: 80 DITKESTANEIVSHFEGEKADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKPQ 139
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----KLD 118
G FV K+FR KD T L K F +V KP++SR S E FVVCQ Y P +
Sbjct: 140 GTFVAKIFRGKDVTLLYSQLKIFFPQVTIAKPRSSRNSSIEAFVVCQRYAPPVGYVPNMS 199
Query: 119 TKFFDPKY 126
D KY
Sbjct: 200 NPLLDQKY 207
>gi|345097013|gb|AEN68008.1| cell division protein [Heliconius numata aurora]
Length = 247
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + D+V+ DG+P+V D Y Q L L AL + + +LKE
Sbjct: 81 DITKISTAHEIIKEFEGLXADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEX 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|303311695|ref|XP_003065859.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105521|gb|EER23714.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320039764|gb|EFW21698.1| FtsJ-like methyltransferase [Coccidioides posadasii str. Silveira]
Length = 380
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 188 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 247
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F++V KP++SR S E FVVC+ +I P
Sbjct: 248 LKTVFEKVSVAKPRSSRASSLEAFVVCEGFIPP 280
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|345097053|gb|AEN68028.1| cell division protein [Heliconius numata silvana]
Length = 247
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + D+V+ DG+P+V D Y Q L L AL + + +LKE
Sbjct: 81 DITKISTAHEIIKEFEGLXADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEX 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 GVFVAKIFRGKDVTLLYSQLKLFFDFVTVSKPRSSRNSSIEAFVICQNYKAPPGYVPTMV 200
Query: 123 DP 124
+P
Sbjct: 201 NP 202
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|212529056|ref|XP_002144685.1| tRNA methyltransferase, putative [Talaromyces marneffei ATCC 18224]
gi|210074083|gb|EEA28170.1| tRNA methyltransferase, putative [Talaromyces marneffei ATCC 18224]
Length = 429
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 191 VDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLLYAQ 250
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+ +F++V KP++SR S E FVVC+ ++ P D+
Sbjct: 251 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFMPPEGFDS 288
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHADPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|346469259|gb|AEO34474.1| hypothetical protein [Amblyomma maculatum]
Length = 420
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 95 DITEVSTAQKIISHFEGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHVLKNG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G ++ K+FR KD T L K F+ V KP++SR S E FVVC+HY P
Sbjct: 155 GTYIAKIFRGKDVTLLYAQLKLFFEHVTVAKPRSSRNSSIESFVVCRHYSPP 206
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
+G+R+R+AFKL+Q+N +F+ VDLCAAPG W QV + + ++
Sbjct: 19 EGWRARSAFKLLQINEEFDIFAGVTKAVDLCAAPGSWSQVLSRKLRGNA 67
>gi|350631402|gb|EHA19773.1| Hypothetical protein ASPNIDRAFT_52998 [Aspergillus niger ATCC 1015]
Length = 432
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 177 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQ 236
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ +F++V KP++SR S E FVVC+ +I P+
Sbjct: 237 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 270
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|440804458|gb|ELR25335.1| ribosomal RNA large subunit methyltransferase J, putative
[Acanthamoeba castellanii str. Neff]
Length = 261
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ DG+P+V D Y Q L L AL + + +LK GG F+ K+FR KD T L
Sbjct: 118 DLVVCDGAPDVTGMHDMDEYVQAQLILAALNITTHVLKPGGTFIAKIFRGKDVTLLYEQL 177
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F V KP++SR S E FV+CQHY P +P
Sbjct: 178 KVFFPSVTIAKPKSSRNSSIESFVLCQHYTPPQGYVPTIINP 219
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q++ F + VDLCAAPG W QV + ++ SS+
Sbjct: 20 GWRARSAFKLLQIDEDFNIFKDVVRAVDLCAAPGSWSQVLSRKLLGSSV 68
>gi|224146194|ref|XP_002325916.1| predicted protein [Populus trichocarpa]
gi|222862791|gb|EEF00298.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + +LKEG
Sbjct: 101 DITNARTAEVVIRHFDGSKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P D K
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFDPK 218
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKLIQ++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLIQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|289192039|ref|YP_003457980.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
sp. FS406-22]
gi|288938489|gb|ADC69244.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
sp. FS406-22]
Length = 246
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 8/112 (7%)
Query: 5 TTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGW 64
+ +K R I E K KVDVV+ D SPN+ W D L AL++A+ +LKE G
Sbjct: 102 SLNKIRELIPNEEK--KVDVVISDASPNISGYWDIDHARSIDLVTTALQIATEMLKERGN 159
Query: 65 FVTKVFRSK---DYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
FV KVF DY +L+ K+ F++V+ TKPQASRKESAE++V+ + Y
Sbjct: 160 FVAKVFYGDMIDDYVNLV---KKYFEKVYITKPQASRKESAEVYVIAKRYTG 208
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
YRSRA+FKL+QLN KF ++ K+ +DL APGGWMQVA++
Sbjct: 26 YRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVARE 66
>gi|157117994|ref|XP_001658956.1| ribosomal RNA methyltransferase [Aedes aegypti]
gi|108875892|gb|EAT40117.1| AAEL008120-PA [Aedes aegypti]
Length = 306
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 3 DITTDKCRIAITRELKTW-KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT AI + K +V+ DG+P+V D Y Q L L AL + + +L E
Sbjct: 96 DITKLSTANAIIEQFGNGQKAQLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTE 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG F+ K+FR KD T L + F++V KP +SR S E FVVCQ Y P + +
Sbjct: 156 GGTFIAKIFRGKDTTLLYSQLRIFFEKVSIAKPASSRNSSIEAFVVCQSYKPPEGYNPQM 215
Query: 122 FDP 124
+P
Sbjct: 216 INP 218
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKLI ++ F + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLIHIDEVFNIFEGVTRAVDLCAAPGSWSQVLSKKL 63
>gi|410907644|ref|XP_003967301.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Takifugu rubripes]
Length = 317
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL + + +LK
Sbjct: 94 DITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDV-DEYIQAQLLLAALNITTHVLKP 152
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR KD T L K F V KP++SR S E FVVCQ+Y P
Sbjct: 153 RGTFVAKIFRGKDVTLLYSQLKIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPTGFMPNM 212
Query: 122 FDP 124
+P
Sbjct: 213 SNP 215
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+QL+++F VDLCAAPG W QV + +
Sbjct: 19 EGWRARSAFKLLQLDQEFNLFTGVNRAVDLCAAPGSWSQVLSRKL 63
>gi|358369371|dbj|GAA85986.1| tRNA methyltransferase [Aspergillus kawachii IFO 4308]
Length = 432
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 177 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQ 236
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ +F++V KP++SR S E FVVC+ +I P+
Sbjct: 237 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 270
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|195392525|ref|XP_002054908.1| GJ22540 [Drosophila virilis]
gi|194152994|gb|EDW68428.1| GJ22540 [Drosophila virilis]
Length = 316
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDIT ++ AI + K +V+ DG+P+V +DAY Q L L AL +++ IL+E
Sbjct: 96 EDITKEETAEAIIKFFDGKKAQLVVSDGAPDVTGMHDWDAYMQAQLLLSALSISTYILEE 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-----APAK 116
GG F+ KV+R+ + + + ++ F+ V KP ASR S E FVVC+ + P
Sbjct: 156 GGSFMGKVYRAANTSDVYLQLQRFFKDVCIFKPSASRNSSIEAFVVCRQFTMPEGHVPCN 215
Query: 117 LDTKFFD-PKYAFKEL-GAEDGKLNALK--KKQVEKSKALGYPSD 157
L ++FD P+ A + + G D K+ L Q E L Y D
Sbjct: 216 LSLEWFDKPEEALRNITGIRDYKVVHLPFVAHQCEYDADLSYELD 260
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F L+ VDLCAAPGGW QV + +
Sbjct: 19 QGWRARSAFKLLQADETFNLLEGVTRAVDLCAAPGGWSQVLSKRL 63
>gi|134079334|emb|CAK96963.1| unnamed protein product [Aspergillus niger]
Length = 365
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 177 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQ 236
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ +F++V KP++SR S E FVVC+ +I P+
Sbjct: 237 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 270
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|256809981|ref|YP_003127350.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
fervens AG86]
gi|256793181|gb|ACV23850.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
fervens AG86]
Length = 246
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVDVV+ D SPN+ W D L AL++A+ +LKE G FV KVF +
Sbjct: 116 KVDVVISDASPNISGYWDVDHARSIDLVTTALQIATEMLKERGNFVAKVFYGNMIDDYVK 175
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
+ K+ F++V+ TKPQASRKESAE++V+ + Y
Sbjct: 176 LVKKYFEKVYITKPQASRKESAEVYVIAKRYTG 208
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
YRSRA+FKL+QLN KF ++ ++ +DL APGGWMQVA++
Sbjct: 26 YRSRASFKLMQLNEKFNVIKPGRIVLDLGCAPGGWMQVARE 66
>gi|317032331|ref|XP_001394644.2| transfer RNA methyltransferase [Aspergillus niger CBS 513.88]
Length = 396
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D L
Sbjct: 141 VDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQ 200
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ +F++V KP++SR S E FVVC+ +I P+
Sbjct: 201 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 234
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|432110134|gb|ELK33911.1| Putative ribosomal RNA methyltransferase 1 [Myotis davidii]
Length = 321
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 92 DITQLSTAKEIIRHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 151 GGCFVAKIFRGRDVTLLYSQLRVFFSNVLCAKPRSSRNSSIEAFAVCQGYDPP 203
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QLN +F+ Q VDLCAAPG W QV Q +
Sbjct: 19 NGWRARSAFKLLQLNEEFQLFQGVTRAVDLCAAPGSWSQVLSQKI 63
>gi|258575121|ref|XP_002541742.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Uncinocarpus reesii
1704]
gi|237902008|gb|EEP76409.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Uncinocarpus reesii
1704]
Length = 245
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 52 PVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYA 111
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+RV KP++SR S E FVVC+ ++ P
Sbjct: 112 QLKTVFERVSVAKPRSSRASSLEAFVVCEGFMPP 145
>gi|123449199|ref|XP_001313321.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121895200|gb|EAY00392.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 250
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K + L K D VL DG+P+ + +D Y Q + +L +A+ +L+EG
Sbjct: 90 DITDVKTAENVISLLDGNKADAVLADGAPDTIIRIEFDEYVQHNIVKASLTIATMVLREG 149
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV+K+FR+K LL IF F ++ KP+A R S E F+VCQ + P
Sbjct: 150 GTFVSKIFRTKSLPKLLAIFGCFFSKITMCKPRACRLSSVESFIVCQGFKLPDGYTPTLC 209
Query: 123 D--------PKYAFKELGAEDG----KLNALKKKQVEK 148
P+ F+ G DG + L Q+E+
Sbjct: 210 TDDLPTGPVPEVPFRMCGDVDGLDSERTYPLSNDQIEQ 247
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 184 TEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM---ASSIIHF 240
T V +G+R+R+A+KLIQ+ + FL+ S VDLC+APG W QV + M A II
Sbjct: 14 TAVEEGWRARSAYKLIQVESEMHFLKDSTRVVDLCSAPGSWSQVCAKLMPETDARKIISI 73
Query: 241 D 241
D
Sbjct: 74 D 74
>gi|15669566|ref|NP_248379.1| cell division protein FtsJ [Methanocaldococcus jannaschii DSM 2661]
gi|3023819|sp|Q58771.1|RLME_METJA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|1592021|gb|AAB99383.1| cell division protein FtsJ [Methanocaldococcus jannaschii DSM 2661]
Length = 245
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSK---DYTS 77
KVDVV+ D SPN+ W D L AL++A+ +LKE G FV KVF DY +
Sbjct: 116 KVDVVISDASPNISGYWDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVN 175
Query: 78 LLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L+ K+ F++V+ TKPQASRKESAE++V+ + Y
Sbjct: 176 LV---KKYFEKVYITKPQASRKESAEVYVIAKRY 206
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
YRSRA+FKL+QLN KF ++ K+ +DL APGGWMQVA++
Sbjct: 26 YRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVARE 66
>gi|62857467|ref|NP_001016817.1| FtsJ RNA methyltransferase homolog 1 [Xenopus (Silurana)
tropicalis]
gi|89273969|emb|CAJ81745.1| FtsJ homolog 1 (E. coli) [Xenopus (Silurana) tropicalis]
Length = 335
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I R + D+V+ DG+P+V D Y Q L L AL + + +L++G
Sbjct: 95 DITKVSTAHEIIRHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLRDG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD T L + F+ V KP++SR S E FVVCQ Y P
Sbjct: 155 GTFVAKIFRGKDVTLLYSQLQIFFREVTCAKPRSSRNSSIEAFVVCQGYRPP 206
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
G+R+R+AFKL+QL+ ++ Q + VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAFKLLQLDEEYRLFQGVQRAVDLCAAPGSWSQVLSRKLRGS 66
>gi|355757329|gb|EHH60854.1| Putative ribosomal RNA methyltransferase 1 [Macaca fascicularis]
Length = 329
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|17554650|ref|NP_497843.1| Protein R74.7 [Caenorhabditis elegans]
gi|9910861|sp|Q22031.3|RRMJ1_CAEEL RecName: Full=Putative ribosomal RNA methyltransferase R74.7;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|5824584|emb|CAA85279.2| Protein R74.7 [Caenorhabditis elegans]
Length = 337
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + K D+V+ DG+P+V D + Q L L A + S +LKEG
Sbjct: 92 DITSVDTANQVIKHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+FRS++ + L K+ F++V+ KP++SR+ S E FV+C Y P
Sbjct: 152 GNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLCLDYSPP 203
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+R+R+AFKL+Q++ +F+ L+ + VDLCAAPG W QV + +
Sbjct: 21 WRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRL 63
>gi|444323463|ref|XP_004182372.1| hypothetical protein TBLA_0I01940 [Tetrapisispora blattae CBS 6284]
gi|387515419|emb|CCH62853.1| hypothetical protein TBLA_0I01940 [Tetrapisispora blattae CBS 6284]
Length = 300
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K D V DG+P+V D Y Q L + AL+L + ILKEG
Sbjct: 102 DITHPRTLNKILELFNNSKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKEG 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D L LF++V KP++SR S E F+VC YI P
Sbjct: 162 GIFVAKIFRGRDINLLYTQLGYLFEQVICAKPRSSRGTSLEAFIVCIGYIPP 213
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMM 233
GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + M
Sbjct: 20 GYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQVLSKTMF 66
>gi|386781808|ref|NP_001247931.1| putative ribosomal RNA methyltransferase 1 [Macaca mulatta]
gi|355704770|gb|EHH30695.1| Putative ribosomal RNA methyltransferase 1 [Macaca mulatta]
gi|380811278|gb|AFE77514.1| putative ribosomal RNA methyltransferase 1 isoform a [Macaca
mulatta]
gi|383417197|gb|AFH31812.1| putative ribosomal RNA methyltransferase 1 isoform a [Macaca
mulatta]
gi|384946194|gb|AFI36702.1| putative ribosomal RNA methyltransferase 1 isoform a [Macaca
mulatta]
Length = 329
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|402910070|ref|XP_003917714.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Papio
anubis]
Length = 329
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|321474858|gb|EFX85822.1| hypothetical protein DAPPUDRAFT_309098 [Daphnia pulex]
Length = 302
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D Y Q L L AL + + +LK+GG FV K+FR +D T L
Sbjct: 112 KADLVVCDGAPDVTGLHDIDEYVQAQLLLAALNITTHVLKDGGIFVAKIFRGRDITLLYS 171
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F +V KP +SR S E FVVCQ+Y P+ +P
Sbjct: 172 QLRIFFPKVTVAKPMSSRNSSIEAFVVCQNYSPPSGYIPNMSNP 215
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM------MASSIIHFDD 242
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + + +++ I+ D
Sbjct: 20 GWRARSAFKLLQIDEEFRIFEGVKNAVDLCAAPGSWSQVLTRKLHNKDENVSAKIVAVDL 79
Query: 243 ESVLKHPSTTVEIQ 256
+++ P ++IQ
Sbjct: 80 QAMAPLPG-VIQIQ 92
>gi|357123662|ref|XP_003563527.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Brachypodium distachyon]
Length = 318
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L AL + + +LK G
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD TSLL+ K F RV KP++SR S E F VC++Y P
Sbjct: 161 GKFVAKIFRGKD-TSLLYCQLKLFFSRVTFAKPKSSRNSSIEAFAVCENYSPP 212
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++++F K VDLCAAPG W QV +N+
Sbjct: 20 GWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLSRNL 63
>gi|384488193|gb|EIE80373.1| hypothetical protein RO3G_05078 [Rhizopus delemar RA 99-880]
Length = 290
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D+V+ DG+P+V D Y Q L L AL + + +L+ GG FV K+FR KD T L
Sbjct: 117 ADIVICDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGKDITLLYSQ 176
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F V +KP++SR S E F+VCQ+Y P
Sbjct: 177 LKIFFPTVTCSKPRSSRNSSIEAFIVCQNYQPP 209
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QL+ +F FLQ K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLDEEFNFLQGIKRAVDLCAAPGSWSQVLSKRL 63
>gi|378733724|gb|EHY60183.1| cell division protein methyltransferase FtsJ [Exophiala
dermatitidis NIH/UT8656]
Length = 384
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 19 TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSL 78
T++VD+V+ DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ +
Sbjct: 170 TYRVDLVISDGAPDVTGLHDLDIYVQSQLLYSALALAMKVLRPGGKFVAKIFRGRNVDLI 229
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K +F RVH KP++SR S E FVVC+ Y
Sbjct: 230 FAQLKLVFDRVHIAKPRSSRASSIEAFVVCEGY 262
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFSYADPSKCTRVVDLCAAPGSWSQVLSRILI 69
>gi|30679168|ref|NP_851026.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|26983822|gb|AAN86163.1| putative cell division protein [Arabidopsis thaliana]
gi|332002931|gb|AED90314.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 309
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + ILKEG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + +
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 218
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQL 63
>gi|255581073|ref|XP_002531352.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223529050|gb|EEF31036.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
Length = 316
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + IL+EG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILREG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + K
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 218
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|426395794|ref|XP_004064145.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Gorilla
gorilla gorilla]
Length = 329
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDES 244
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQA 78
Query: 245 VLKHPSTTVEIQ 256
+ P V+IQ
Sbjct: 79 MAPLPG-VVQIQ 89
>gi|297806107|ref|XP_002870937.1| hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp.
lyrata]
gi|297316774|gb|EFH47196.1| hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + ILKEG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + +
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 218
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQL 63
>gi|7110661|ref|NP_036412.1| putative ribosomal RNA methyltransferase 1 isoform a [Homo sapiens]
gi|397471349|ref|XP_003807258.1| PREDICTED: putative ribosomal RNA methyltransferase 1 isoform 1
[Pan paniscus]
gi|12643879|sp|Q9UET6.2|RRMJ1_HUMAN RecName: Full=Putative ribosomal RNA methyltransferase 1; AltName:
Full=Protein ftsJ homolog 1; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase
gi|3334739|emb|CAA06749.1| JM23 [Homo sapiens]
gi|23270836|gb|AAH23584.1| FtsJ homolog 1 (E. coli) [Homo sapiens]
gi|119571167|gb|EAW50782.1| FtsJ homolog 1 (E. coli), isoform CRA_a [Homo sapiens]
gi|119571168|gb|EAW50783.1| FtsJ homolog 1 (E. coli), isoform CRA_a [Homo sapiens]
gi|189054765|dbj|BAG37587.1| unnamed protein product [Homo sapiens]
gi|307686265|dbj|BAJ21063.1| FtsJ homolog 1 [synthetic construct]
gi|312151394|gb|ADQ32209.1| FtsJ homolog 1 (E. coli) [synthetic construct]
gi|410222314|gb|JAA08376.1| FtsJ homolog 1 [Pan troglodytes]
gi|410222318|gb|JAA08378.1| FtsJ homolog 1 [Pan troglodytes]
gi|410252886|gb|JAA14410.1| FtsJ homolog 1 [Pan troglodytes]
gi|410252890|gb|JAA14412.1| FtsJ homolog 1 [Pan troglodytes]
gi|410290770|gb|JAA23985.1| FtsJ homolog 1 [Pan troglodytes]
gi|410290774|gb|JAA23987.1| FtsJ homolog 1 [Pan troglodytes]
gi|410350185|gb|JAA41696.1| FtsJ homolog 1 [Pan troglodytes]
Length = 329
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDES 244
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQA 78
Query: 245 VLKHPSTTVEIQ 256
+ P V+IQ
Sbjct: 79 MAPLPG-VVQIQ 89
>gi|261205268|ref|XP_002627371.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis SLH14081]
gi|239592430|gb|EEQ75011.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis SLH14081]
Length = 405
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 194 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 253
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F++V KP++SR S E FVVC+ +I P
Sbjct: 254 LKTVFEKVSVAKPRSSRASSLEAFVVCEGFIPP 286
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|442758559|gb|JAA71438.1| Putative sam-dependent methyltransferase/cell division protein ftsj
[Ixodes ricinus]
Length = 310
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + ILK+G
Sbjct: 95 DITEISTARKIINHFEGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHILKDG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G +V K+FR KD T L K F+ V KP++SR S E FVVCQ Y P
Sbjct: 155 GTYVAKIFRGKDTTLLYAQLKLFFKHVVVAKPRSSRNSSIESFVVCQVYSPP 206
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+AFKL+Q+N +F+ K VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLLQINEEFDIFSGVKKAVDLCAAPGSWSQVLSRKLRGNA 67
>gi|239611411|gb|EEQ88398.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis ER-3]
Length = 405
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 194 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 253
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F++V KP++SR S E FVVC+ +I P
Sbjct: 254 LKTVFEKVSVAKPRSSRASSLEAFVVCEGFIPP 286
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|410988503|ref|XP_004000523.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Felis catus]
Length = 329
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
GG FV K+FR +D T + + F V KP++SR S E F VCQ Y PA
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPPAGF 205
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|449439914|ref|XP_004137730.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Cucumis
sativus]
gi|449483463|ref|XP_004156599.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Cucumis
sativus]
Length = 316
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + IL+EG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQFQLILAGLTIVTHILREG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD + L K F V KP++SR S E F VC++Y P ++K
Sbjct: 161 GKFIAKIFRGKDTSLLYSQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNSK 218
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|154274554|ref|XP_001538128.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces capsulatus
NAm1]
gi|150414568|gb|EDN09930.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces capsulatus
NAm1]
Length = 372
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+D T + + + VD+VL DG+P+V D Y Q L AL LA G+L+
Sbjct: 159 DDYTHNDTPTTTSTSHRLHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRP 218
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D + K +F+ V KP++SR S E FVVC+ +I P
Sbjct: 219 GGKFVAKIFRGRDVDLIYAQLKTVFETVSVAKPRSSRASSLEAFVVCEGFIPP 271
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSNPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|242764601|ref|XP_002340808.1| tRNA methyltransferase, putative [Talaromyces stipitatus ATCC
10500]
gi|218724004|gb|EED23421.1| tRNA methyltransferase, putative [Talaromyces stipitatus ATCC
10500]
Length = 425
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL L G+L+ GG FV K+FR +D L
Sbjct: 192 VDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLTIGVLRPGGKFVAKIFRGRDVDLLYAQ 251
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+ +F++V KP++SR S E FVVC+ ++ P D+
Sbjct: 252 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFMPPEDFDS 289
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHADPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|395854524|ref|XP_003799738.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Otolemur
garnettii]
Length = 296
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 13 ITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK GG FV K+FR
Sbjct: 68 IIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKPGGCFVAKIFR 126
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+D T L + F V KP++SR S E F VCQ Y P
Sbjct: 127 GRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQSYDPP 169
>gi|422294710|gb|EKU22010.1| cell division protein [Nannochloropsis gaditana CCMP526]
Length = 281
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + +VD+V+ DG+P+V D + Q L GAL + + +L G
Sbjct: 97 DITSQATADTIIGHFEGQRVDLVVCDGAPDVTGLHDMDEFLQAQLIFGALAITTHVLASG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR +D T L + F+ + KP +SR S+E FVVC+ + P
Sbjct: 157 GKFVAKVFRGRDLTLLAAQLRLFFESITVAKPASSRVNSSECFVVCEGFQGP 208
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+R+R+AFKL+QL+ +F + + VDLCAAPG W QV + DD+ +
Sbjct: 17 GFRARSAFKLLQLDEEFGLFRNVQKAVDLCAAPGSWSQVLATRLYPDGAFT-DDKGGERE 75
Query: 249 PSTTVEIQE 257
V++QE
Sbjct: 76 RVIAVDLQE 84
>gi|116784269|gb|ABK23279.1| unknown [Picea sitchensis]
Length = 344
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + K D+V+ DG+P+V D + Q L L AL + + +L+ G
Sbjct: 101 DITSARTAEVVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P +
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKMFFSTVTFAKPKSSRNSSIEAFAVCENYNPP-----EG 214
Query: 122 FDPKYAFKEL 131
FDP +K L
Sbjct: 215 FDPNNLYKLL 224
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|225561193|gb|EEH09474.1| 2'-O-ribose methyltransferase [Ajellomyces capsulatus G186AR]
Length = 381
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 188 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 247
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+ V KP++SR S E FVVC+ +I P
Sbjct: 248 LKTVFETVSVAKPRSSRASSLEAFVVCEGFIPP 280
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSNPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|356555232|ref|XP_003545938.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Glycine
max]
Length = 316
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + +LKEG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLLLAGLTIVTHVLKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + K
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 218
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNLFDGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|21593533|gb|AAM65500.1| cell division-like protein [Arabidopsis thaliana]
Length = 308
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + I R K D+V+ DG+P+V D + Q L L L + + ILKEG
Sbjct: 101 DITNARTEVVI-RHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEG 159
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + +
Sbjct: 160 GKFIAKIFRGKD-TSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 217
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQL 63
>gi|90075218|dbj|BAE87289.1| unnamed protein product [Macaca fascicularis]
Length = 299
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|159475208|ref|XP_001695715.1| tRNA-2'-O-ribose methyltransferase [Chlamydomonas reinhardtii]
gi|158275726|gb|EDP01502.1| tRNA-2'-O-ribose methyltransferase [Chlamydomonas reinhardtii]
Length = 323
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++ + D+V+ DG+P+V D Y Q L L AL + +L+ G
Sbjct: 98 DITSEATAKQVISHFHGQPADLVVCDGAPDVTGLHDLDEYVQAQLLLAALSIVCAVLRPG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
G FV K+FR KD L K LF V+ KP++SR S E FVVC+ + P L
Sbjct: 158 GTFVAKIFRGKDVALLYSQLKMLFPEVYVAKPKSSRNSSIEAFVVCRRFDPPPGL 212
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+A+KL+Q++ F+ + VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAYKLLQIDEAFDIFSGVEHAVDLCAAPGSWSQVLSRKLFLPAL 68
>gi|395831828|ref|XP_003788990.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Otolemur garnettii]
Length = 308
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 92 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y PA
Sbjct: 151 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQSYDPPAGFTPDL 210
Query: 122 FDP 124
P
Sbjct: 211 TRP 213
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 20 GWRARSAFKLLQLDEQFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGCGH 70
>gi|291407431|ref|XP_002719910.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 331
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 202
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM---MASSIIHFDDESV 245
G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV Q + + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDEEFQLFKGVTRAVDLCAAPGSWSQVLSQKIGGQGSGQVVAVDLQAM 79
Query: 246 LKHPSTT 252
P T
Sbjct: 80 APLPGVT 86
>gi|168042748|ref|XP_001773849.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674836|gb|EDQ61339.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ K + K D+V+ DG+P+V D + Q L L AL + + +L+ G
Sbjct: 97 DITSAKTAELVIGHFDGGKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRPG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G FV K+FR KD + L K F V KP++SR S E FVVC+ Y P + D K
Sbjct: 157 GNFVAKIFRGKDISLLYTQLKIFFPVVTCAKPKSSRNSSIEAFVVCEGYNPPEQFDYK 214
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q++ +F L+ +K VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLLQIDEEFGILEGAKRVVDLCAAPGSWSQVLSRKLYQPAV 68
>gi|240277959|gb|EER41466.1| 2'-O-ribose methyltransferase [Ajellomyces capsulatus H143]
gi|325096021|gb|EGC49331.1| 2-O-ribose methyltransferase [Ajellomyces capsulatus H88]
Length = 379
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 186 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 245
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+ V KP++SR S E FVVC+ +I P
Sbjct: 246 LKTVFETVSVAKPRSSRASSLEAFVVCEGFIPP 278
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFAHSNPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|291413158|ref|XP_002722848.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 333
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFQGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 202
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ---NMMASSIIHFDDES 244
G+R+R+AFKL+QL+ +F+ Q VDLCAAPGGW QV Q ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGGWSQVLSQKTGGQEGGQVLAVDLQA 78
Query: 245 VLKHPSTT 252
+ P T
Sbjct: 79 MAPLPGVT 86
>gi|242066866|ref|XP_002454722.1| hypothetical protein SORBIDRAFT_04g036220 [Sorghum bicolor]
gi|241934553|gb|EES07698.1| hypothetical protein SORBIDRAFT_04g036220 [Sorghum bicolor]
Length = 317
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L AL + + +LK G
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD TSLL+ K F +V KP++SR S E F VC++Y P
Sbjct: 161 GKFVAKIFRGKD-TSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++++F K VDLCAAPG W QV +N+
Sbjct: 20 GWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLSRNL 63
>gi|268575120|ref|XP_002642539.1| Hypothetical protein CBG20162 [Caenorhabditis briggsae]
Length = 331
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + K D+V+ DG+P+V D + Q L L A + S +LK G
Sbjct: 92 DITSVETANQVIEHFSGEKADIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKNG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+FRS++ + L K+ F++V+ KP++SR+ S E FV+C Y P
Sbjct: 152 GNFLAKIFRSRNSSLLYAQMKRYFKQVYLAKPRSSRQSSCEAFVLCLDYSPP 203
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+R+R+AFKL+Q++ +F+ L+ VDLCAAPG W QV + +
Sbjct: 21 WRARSAFKLMQIDDEFQILKGVTRAVDLCAAPGSWSQVLSKRL 63
>gi|392343081|ref|XP_001062916.3| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Rattus
norvegicus]
gi|392355517|ref|XP_343772.5| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Rattus
norvegicus]
Length = 326
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 202
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDES 244
KG+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV Q + S ++ D ++
Sbjct: 19 KGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVGGQSSGQVVAVDLQA 78
Query: 245 VLKHPSTTVEIQ 256
+ P ++IQ
Sbjct: 79 MAPLPG-VIQIQ 89
>gi|241997876|ref|XP_002433581.1| cell division protein FtsJ, putative [Ixodes scapularis]
gi|215495340|gb|EEC04981.1| cell division protein FtsJ, putative [Ixodes scapularis]
Length = 274
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + ILK+G
Sbjct: 59 DITEISTARKIINHFEGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHILKDG 118
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G +V K+FR KD T L K F+ V KP++SR S E FVVCQ Y P
Sbjct: 119 GTYVAKIFRGKDTTLLYAQLKLFFKHVVVAKPRSSRNSSIESFVVCQVYSPP 170
>gi|226500760|ref|NP_001152207.1| ribosomal RNA methyltransferase 1 [Zea mays]
gi|195653845|gb|ACG46390.1| ribosomal RNA methyltransferase 1 [Zea mays]
gi|224035109|gb|ACN36630.1| unknown [Zea mays]
gi|413939353|gb|AFW73904.1| Ribosomal RNA methyltransferase 1 [Zea mays]
Length = 318
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L AL + + +LK G
Sbjct: 101 DITNARTADVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD TSLL+ K F +V KP++SR S E F VC++Y P
Sbjct: 161 GKFVAKIFRGKD-TSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++++F K VDLCAAPG W QV +N+
Sbjct: 20 GWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVLSRNL 63
>gi|115469828|ref|NP_001058513.1| Os06g0704900 [Oryza sativa Japonica Group]
gi|53792764|dbj|BAD53799.1| putative FtsJ homolog 1 isoform b [Oryza sativa Japonica Group]
gi|113596553|dbj|BAF20427.1| Os06g0704900 [Oryza sativa Japonica Group]
gi|215736929|dbj|BAG95858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198852|gb|EEC81279.1| hypothetical protein OsI_24387 [Oryza sativa Indica Group]
gi|222636192|gb|EEE66324.1| hypothetical protein OsJ_22564 [Oryza sativa Japonica Group]
Length = 317
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L AL + + +LK G
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD TSLL+ K F +V KP++SR S E F VC++Y P
Sbjct: 161 GKFVAKIFRGKD-TSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++++F K VDLCAAPG W QV +N+
Sbjct: 20 GWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLSRNL 63
>gi|326513676|dbj|BAJ87857.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L AL + + +LK G
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD TSLL+ K F +V KP++SR S E F VC++Y P
Sbjct: 161 GKFVAKIFRGKD-TSLLYCQLKLFFSQVTFAKPKSSRNSSIEAFAVCENYSPP 212
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++++F + VDLCAAPG W QV +N+
Sbjct: 20 GWRARSAFKLMQIDQEFNIFHGVERAVDLCAAPGSWSQVLSRNL 63
>gi|300123162|emb|CBK24435.2| unnamed protein product [Blastocystis hominis]
Length = 288
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ K I + K +V+ DG+P+V D Y Q L L AL + + +L +G
Sbjct: 93 DITSKKTADEIINHFEGKKAQLVICDGAPDVTGLHDMDVYVQSQLLLSALSITAQVLCDG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+ K+FR +D T L + F V KP++SR S E FVVC+ + P D F
Sbjct: 153 GTFIAKIFRGRDVTLLFAQLRVFFSEVACCKPKSSRNSSMEAFVVCRDFSIPEGFDVNQF 212
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+AFKL+Q+N ++ + VDLCAAPG W QV + +
Sbjct: 20 GYRARSAFKLLQINEEYHIFDQVSRAVDLCAAPGSWSQVLSREL 63
>gi|206598233|gb|ACI16035.1| ribosomal RNA methyltransferase [Bodo saltans]
Length = 321
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT+K + L K ++V+ DG+P+V D Y Q L L AL + + +L G
Sbjct: 91 DITTEKTANEVIGRLGDVKAELVICDGAPDVTGLHELDEYVQHQLLLAALNITTFVLAPG 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FVTK+FR + L+ + F+ V KP++SR S E F+VCQ++ P
Sbjct: 151 GTFVTKMFRGPNTPFLVAKSEMFFENVMIMKPKSSRNASMEAFMVCQNFRPPIGFVASMV 210
Query: 123 DPKYAF 128
DP A
Sbjct: 211 DPVCAL 216
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
GYR+R+A+KL+Q++ + + VDLCAAPG W QV
Sbjct: 20 GYRARSAYKLLQIDEELDVFTNVTKAVDLCAAPGSWSQV 58
>gi|22028410|gb|AAH34880.1| FtsJ homolog 1 (E. coli) [Mus musculus]
Length = 322
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKL 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDL 209
Query: 118 DTKFFDPKYAFKEL 131
+ Y F +L
Sbjct: 210 TRPLLNHSYDFNQL 223
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM---MASSIIHFDDES 244
G+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV Q + + ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVGGQGSGQVVAVDLQA 78
Query: 245 VLKHPSTTVEIQ 256
+ P ++IQ
Sbjct: 79 MAPLPG-VIQIQ 89
>gi|20090152|ref|NP_616227.1| 23S RNA methyltransferase J [Methanosarcina acetivorans C2A]
gi|74532956|sp|Q8TR92.1|RLME_METAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|19915136|gb|AAM04707.1| 23S RNA methyltransferase J [Methanosarcina acetivorans C2A]
Length = 272
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI D I R + DVVL D +PN+ NW YD LT AL+ A ILK
Sbjct: 84 DINADSTIKKIIRAVGEKGADVVLCDAAPNLSGNWSYDHARSIELTTSALECAKKILKPK 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAKLDTKF 121
G FV KVF+ + L + F V + PQASR +SAEI+V+ + ++ AP + KF
Sbjct: 144 GNFVVKVFQGDMFNDYLEKVRDNFVHVKAYSPQASRSQSAEIYVIGKKFLTAPLRRGDKF 203
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRA+FKL Q+N K +++ VDL AAPGGW+QVAKQ
Sbjct: 17 GYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQ 58
>gi|354485981|ref|XP_003505160.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Cricetulus griseus]
Length = 329
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKL 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYGQLRVFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 202
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+ +F+ Q K VDLCAAPG W QV Q + S ++ D +++
Sbjct: 20 GWRARSAFKLLQLDEEFQLFQGVKRAVDLCAAPGSWSQVLSQKIGGQSSGQVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P ++IQ
Sbjct: 80 APLPG-VIQIQ 89
>gi|344250012|gb|EGW06116.1| Putative ribosomal RNA methyltransferase 1 [Cricetulus griseus]
Length = 330
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKL 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYGQLRVFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 202
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+ +F+ Q K VDLCAAPG W QV Q + S ++ D +++
Sbjct: 20 GWRARSAFKLLQLDEEFQLFQGVKRAVDLCAAPGSWSQVLSQKIGGQSSGQVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P ++IQ
Sbjct: 80 APLPG-VIQIQ 89
>gi|301111504|ref|XP_002904831.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262095161|gb|EEY53213.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 256
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + I K VV+ DG+P+V D + Q L AL + + +L+EG
Sbjct: 99 DITSKRTAEQIISHFHGAKAQVVVSDGAPDVTGVHDIDEFVQAELLAAALNITTHVLEEG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP---AKLDT 119
G FV K+FR + Y L F+ V +KP +SR +S E FVVCQ + P + T
Sbjct: 159 GAFVAKIFRCEQYDLLATQLSVFFESVSCSKPMSSRAQSNEAFVVCQGFRLPENYTPVMT 218
Query: 120 KFFDPKYAFKE 130
+ P+Y +E
Sbjct: 219 SYLLPRYGLEE 229
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM-ASSIIHFDDESV 245
G+R+R+AFKL+QL+ +F+FL+ + VDLCAAPG W QV + + AS++ D + V
Sbjct: 20 GFRARSAFKLLQLDEQFDFLRNVQRAVDLCAAPGSWSQVLSRKLYDASNVQSVDSDDV 77
>gi|57111745|ref|XP_538022.1| PREDICTED: putative ribosomal RNA methyltransferase 1 isoform 1
[Canis lupus familiaris]
Length = 329
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSNVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|301764809|ref|XP_002917816.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Ailuropoda melanoleuca]
Length = 329
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|213403496|ref|XP_002172520.1| tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000567|gb|EEB06227.1| tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 280
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I D+V+ DG+P+V D Y Q + L A+ LA+ +L+ G
Sbjct: 95 DITHPDTLPIILSHFGDEPADLVVSDGAPDVTGLHDLDEYIQAQILLAAMNLAACVLRPG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D + L + LF+ V KP++SR S E FVVCQ + P
Sbjct: 155 GTFVAKIFRGRDVSLLYSQLRLLFKHVTCAKPRSSRASSLEAFVVCQDFCPP 206
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK----QNMMAS---SIIHF 240
+G+R+R+AFKL+QLN +F+ + + VDLCAAPG W QV QN+ AS +I+
Sbjct: 19 QGWRARSAFKLLQLNEQFDLFKGVRRVVDLCAAPGSWSQVLSRELVQNVPASERPTIVSV 78
Query: 241 D 241
D
Sbjct: 79 D 79
>gi|148702026|gb|EDL33973.1| Ftsj homolog 1 (E. coli), isoform CRA_b [Mus musculus]
Length = 344
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 113 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKL 171
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 172 GGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDL 231
Query: 118 DTKFFDPKYAFKEL 131
+ Y F +L
Sbjct: 232 TRPLLNHSYDFNQL 245
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM---MASSIIHFDDES 244
G+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV Q + + ++ D ++
Sbjct: 41 NGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVGGQGSGQVVAVDLQA 100
Query: 245 VLKHPSTTVEIQ 256
+ P ++IQ
Sbjct: 101 MAPLPG-VIQIQ 111
>gi|50311753|ref|XP_455905.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645041|emb|CAG98613.1| KLLA0F18414p [Kluyveromyces lactis]
Length = 301
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K IT + K D + DG+P+V D Y Q L L AL+L++ +L++G
Sbjct: 95 DITHPKTLQTITELFEGKKADFICSDGAPDVTGLHDLDEYVQQQLILSALQLSTCLLRKG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR +D L LF++V KP++SR S E F+VC Y PA + K
Sbjct: 155 GNFVAKIFRGRDIDMLYSQLGYLFEKVICAKPRSSRGTSLESFIVCLGYNPPANWEPKL 213
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
+GYR+R+AFKL+QL+ F FLQ++ VDLCAAPG W QV + + S
Sbjct: 19 QGYRARSAFKLLQLDDDFHFLQQAVRVVDLCAAPGSWSQVLSRRLFPQS 67
>gi|357446585|ref|XP_003593568.1| rRNA methyltransferase-like protein [Medicago truncatula]
gi|355482616|gb|AES63819.1| rRNA methyltransferase-like protein [Medicago truncatula]
Length = 316
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K ++V+ DG+P+V D + Q L L L + + +LKEG
Sbjct: 101 DITNARTAEVVIRHFDGCKANLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + K
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 218
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|355689322|gb|AER98795.1| FtsJ-like protein 1 [Mustela putorius furo]
Length = 329
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|348685725|gb|EGZ25540.1| putative ribosomal RNA methyltransferase [Phytophthora sojae]
Length = 256
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + I K V++ DG+P+V D + Q L AL + + +L+EG
Sbjct: 99 DITSKRTAEQIIGHFHGAKAQVLVSDGAPDVTGVHDIDEFVQAELLAAALNITTHVLEEG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAK---LDT 119
G FV K+FR + Y L F+ V +KP +SR +S E FVVCQ + P K + T
Sbjct: 159 GSFVAKIFRCEQYDLLATQLSVFFESVSCSKPMSSRAQSNEAFVVCQGFRLPEKYTPVMT 218
Query: 120 KFFDPKYAFKELGAEDGKL 138
+ P+Y +E A D L
Sbjct: 219 SYLLPRYGLEEGEAHDPLL 237
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+R+R+AFKL+QL+ +F+FL+ + VDLCAAPG W QV + + +S + D ++
Sbjct: 20 GFRARSAFKLLQLDEQFDFLRHVQRAVDLCAAPGSWSQVLSRKLYDASNVQSADSGDVR- 78
Query: 249 PSTTVEIQE 257
+V++QE
Sbjct: 79 -VVSVDLQE 86
>gi|156368067|ref|XP_001627518.1| predicted protein [Nematostella vectensis]
gi|156214430|gb|EDO35418.1| predicted protein [Nematostella vectensis]
Length = 316
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 59/122 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 97 DITKTSTANQIISHFEGEHADLVICDGAPDVTGLHDIDEYIQGQLLLAALNITTHVLKPG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD + L K F V KP++SR S E FVVCQ Y P
Sbjct: 157 GNFVAKIFRGKDVSLLYAQLKVFFPTVTICKPRSSRNSSIESFVVCQGYAPPQGYKPTMS 216
Query: 123 DP 124
+P
Sbjct: 217 NP 218
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+AFKL+QLN F+ VDLCAAPG W QV + ++
Sbjct: 20 GWRARSAFKLLQLNEDFDLFSGVSKVVDLCAAPGSWSQVLSRKLI 64
>gi|260793442|ref|XP_002591721.1| hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae]
gi|229276930|gb|EEN47732.1| hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae]
Length = 303
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 60/122 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + +LK+G
Sbjct: 96 DITKVSTAQEIIGHFSGEQADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD T L K F V KP++SR S E FVVC+ Y P
Sbjct: 156 GGFVAKIFRGKDITLLYSQLKIFFPDVTVAKPRSSRNSSIESFVVCRGYSPPEGYTPNMM 215
Query: 123 DP 124
+P
Sbjct: 216 NP 217
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLMQIDEEFNVLSGVQKVVDLCAAPGSWSQVLSKRL 63
>gi|45201131|ref|NP_986701.1| AGR036Wp [Ashbya gossypii ATCC 10895]
gi|44985914|gb|AAS54525.1| AGR036Wp [Ashbya gossypii ATCC 10895]
gi|374109952|gb|AEY98857.1| FAGR036Wp [Ashbya gossypii FDAG1]
Length = 306
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 56/112 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K K D V DG+P+V D Y Q L L ALKL +L G
Sbjct: 94 DITHPRTLTKIIELFKGEKADFVCSDGAPDVTGLHDLDEYVQQQLILSALKLTVSLLAPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D L LF +V KP++SR S E F+VCQ Y P
Sbjct: 154 GCFVAKIFRGRDIDMLYSQLGLLFDKVTCAKPRSSRGTSLESFIVCQGYTPP 205
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QLN +F FL + VDLCAAPG W QV + +
Sbjct: 19 QGFRARSAFKLLQLNDEFHFLDGVQRVVDLCAAPGSWSQVLSRELF 64
>gi|341889636|gb|EGT45571.1| hypothetical protein CAEBREN_14422 [Caenorhabditis brenneri]
Length = 350
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + K D+V+ DG+P+V D + Q L L A + S +LK G
Sbjct: 92 DITSVDTANQVIEHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKIG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+FRS++ + L K+ F++V+ KP++SR+ S E FV+C Y P
Sbjct: 152 GNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLCLDYSPP 203
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+R+R+AFKL+Q++ +F+ L+ + VDLCAAPG W QV + +
Sbjct: 21 WRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRL 63
>gi|46877062|ref|NP_598752.2| Ftsj homolog [Mus musculus]
gi|26331300|dbj|BAC29380.1| unnamed protein product [Mus musculus]
Length = 324
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKL 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 202
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM---MASSIIHFDDES 244
G+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV Q + + ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVGGQGSGQVVAVDLQA 78
Query: 245 VLKHPSTTVEIQ 256
+ P ++IQ
Sbjct: 79 MAPLPG-VIQIQ 89
>gi|374636480|ref|ZP_09708048.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanotorris formicicus
Mc-S-70]
gi|373558869|gb|EHP85190.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanotorris formicicus
Mc-S-70]
Length = 247
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T ++ I L K VV+ D SPN+ W D LT ALK+A+ +LKEG
Sbjct: 98 DMTKEETIQKIREILYPAKPTVVISDASPNISGVWDVDHARSIELTTIALKIATKLLKEG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
G F KVF+ + + + ++ F++V+ TKP+ASRKESAE++VV + Y
Sbjct: 158 GNFAVKVFQGDMFMDYVSLVEKYFEKVYPTKPRASRKESAEVYVVGKGYTG 208
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLKH 248
YRSRA FKL QLN KF F+++ + VDL APGGW+Q A++ + ++ D +SV
Sbjct: 28 YRSRATFKLFQLNEKFRFMKEGDIVVDLGCAPGGWLQAAREIVGEKGFVVGVDLQSVKPL 87
Query: 249 PSTTVE 254
P V+
Sbjct: 88 PYDNVK 93
>gi|281353664|gb|EFB29248.1| hypothetical protein PANDA_006186 [Ailuropoda melanoleuca]
Length = 320
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|302819760|ref|XP_002991549.1| hypothetical protein SELMODRAFT_133851 [Selaginella moellendorffii]
gi|300140582|gb|EFJ07303.1| hypothetical protein SELMODRAFT_133851 [Selaginella moellendorffii]
Length = 302
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + K D+V+ DG+P+V D + Q L L AL + + +L+ G
Sbjct: 103 DITSARTAELVIQHFHGCKADLVVCDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPG 162
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
FV KVFR KD + L K F V TKP++SR S E FVVC+ Y P
Sbjct: 163 AKFVAKVFRGKDISLLYAQLKMFFTTVTCTKPKSSRNSSIEAFVVCEDYQPP 214
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+AFKL+Q++ +F LQ K VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAFKLLQIDEEFGILQGVKRVVDLCAAPGSWSQVLSRQLYVPS 67
>gi|444518695|gb|ELV12328.1| Putative ribosomal RNA methyltransferase 1 [Tupaia chinensis]
Length = 339
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q ++ D +++
Sbjct: 20 GWRARSAFKLLQLDEEFQLFQGVARAVDLCAAPGSWSQVLSQKFGGQGPGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P ++IQ
Sbjct: 80 APLPG-VIQIQ 89
>gi|195450026|ref|XP_002072331.1| GK22383 [Drosophila willistoni]
gi|194168416|gb|EDW83317.1| GK22383 [Drosophila willistoni]
Length = 305
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K +V+ DG+P+V DAY Q L L AL +A+ IL+EG
Sbjct: 97 DITKESTAKEIIEYFGGQKAQLVISDGAPDVTGQHDRDAYMQGQLLLAALSIATYILEEG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KV+R+ D +S+ F++ F+ V KP ASR S E FVV + + P
Sbjct: 157 GSFVGKVYRAGDISSVYAQFQRFFKDVCLFKPSASRNSSIEAFVVARQFNLP 208
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q F L VDLCAAPG W QV ++M
Sbjct: 19 QGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVLSKHM 63
>gi|363749941|ref|XP_003645188.1| hypothetical protein Ecym_2660 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888821|gb|AET38371.1| Hypothetical protein Ecym_2660 [Eremothecium cymbalariae
DBVPG#7215]
Length = 302
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K K D V DG+P+V D Y Q L L AL+L + +L++G
Sbjct: 95 DITHPRTLGKIMELFKGEKADFVCSDGAPDVTGLHDLDEYVQQQLILSALQLTTCLLRKG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D L LF +V KP++SR S E F+VCQ Y P
Sbjct: 155 GCFVAKIFRGRDIDMLYSQLGYLFNKVICAKPRSSRGTSLESFIVCQDYNPP 206
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F FL VDLCAAPG W QV + +
Sbjct: 19 QGFRARSAFKLLQLDDEFHFLDNVDRVVDLCAAPGSWSQVLSRRLF 64
>gi|291413885|ref|XP_002723197.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 333
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFQGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG F+ K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFMAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQAYDPP 202
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ---NMMASSIIHFDDES 244
G+R+R+AFKL+QL+ +F+ Q VDLCAAPGGW QV Q ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGGWSQVLSQKTGGQEGGQVLAVDLQA 78
Query: 245 VLKHPSTT 252
+ P T
Sbjct: 79 MAPLPGVT 86
>gi|224286965|gb|ACN41184.1| unknown [Picea sitchensis]
Length = 309
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + K D+V+ DG+P+V D + Q L L AL + + +L+ G
Sbjct: 101 DITSARTAEVVIKHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G F+ K+FR KD TSLL+ K F V KP++ R S E F VC++Y P +
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKMFFSTVTFAKPKSGRNSSIEAFAVCENYNPP-----EG 214
Query: 122 FDPKYAFKEL 131
FDP +K L
Sbjct: 215 FDPNNLYKLL 224
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|255712339|ref|XP_002552452.1| KLTH0C05214p [Lachancea thermotolerans]
gi|238933831|emb|CAR22014.1| KLTH0C05214p [Lachancea thermotolerans CBS 6340]
Length = 303
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 60/113 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I + K D V DG+P+V D Y Q L L AL+L + +L+EG
Sbjct: 96 DITHPKTLNKIMDLFEGEKADFVCSDGAPDVTGLHDLDEYVQQQLILSALQLTTCLLREG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G FV K+FR +D L LF+RV KP++SR S E F+VC Y P+
Sbjct: 156 GVFVAKIFRGRDIDMLYSQLSFLFERVVCAKPRSSRGTSLESFIVCLGYRPPS 208
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 7/56 (12%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDES 244
GYR+R+AFKL+QL+ +F FL VDLCAAPG W QV + + FDD++
Sbjct: 20 GYRARSAFKLLQLDEQFHFLDNVTRVVDLCAAPGSWSQVLSRRL-------FDDDT 68
>gi|365982615|ref|XP_003668141.1| hypothetical protein NDAI_0A07440 [Naumovozyma dairenensis CBS 421]
gi|343766907|emb|CCD22898.1| hypothetical protein NDAI_0A07440 [Naumovozyma dairenensis CBS 421]
Length = 309
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I K D V DG+P+V D Y Q L + AL+L + ILKEG
Sbjct: 99 DITHPKTLKRILEIFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKEG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----KLD 118
G FV K+FR +D L LF+ V KP++SR S E F+VC Y P+ +LD
Sbjct: 159 GTFVAKIFRGRDIDMLYSQLGYLFENVVCAKPKSSRGTSLEAFIVCLGYKPPSNWKPRLD 218
Query: 119 TKF 121
F
Sbjct: 219 VDF 221
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+AFKL+QLN +F FL + + VDLCAAPG W QV + + + +
Sbjct: 19 QGYRARSAFKLLQLNDQFHFLDDTNLKRVVDLCAAPGSWSQVLSKKLFNDTTL 71
>gi|296080818|ref|NP_001171684.1| FtsJ RNA methyltransferase homolog 1 [Sus scrofa]
gi|197281892|gb|ACH57153.1| FtsJ-like protein 1 [Sus scrofa]
Length = 329
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLTTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
GG FV K+FR +D T + + F V KP++SR S E F VC+ Y PA
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCKGYDPPAGF 205
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|384248902|gb|EIE22385.1| FtsJ-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 298
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + K D+V+ DG+P+V D + Q L L AL + + +L+ G
Sbjct: 99 DITSTLTANQVISHFHGEKADLVVSDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR K+ L K LF V KP++SR S E FVVC++Y P
Sbjct: 159 GSFVAKVFRGKEAALLYSQLKILFPDVTIAKPKSSRNSSIEAFVVCRNYTPP 210
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q++ F L+ + VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLLQIDEAFSILEGVRHVVDLCAAPGSWSQVLSRRLYLPAL 68
>gi|427779071|gb|JAA54987.1| Putative sam-dependent methyltransferase/cell division protein ftsj
[Rhipicephalus pulchellus]
Length = 611
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 95 DITEVTTAQKIIGHFQGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHVLKTG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G ++ K+FR KD T L K F+ V KP++SR S E FVVC+ Y P
Sbjct: 155 GTYIAKIFRGKDVTLLYAQLKLFFEHVTVAKPRSSRNSSIESFVVCRRYSPP 206
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 285 DITEVTTAQKIIGHFQGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHVLKTG 344
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G ++ K+FR KD T L K F+ V KP++SR S E FVVC+ Y P
Sbjct: 345 GTYIAKIFRGKDVTLLYAQLKLFFEHVTVAKPRSSRNSSIESFVVCRRYSPP 396
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 157 DVNVLYKNLPVSKFIEH--------------ETPTVLLQHATEVGKGYRSRAAFKLIQLN 202
DV +LY L + F EH E+ V +++ +G+R+R+AFKL+Q+N
Sbjct: 166 DVTLLYAQLKL--FFEHVTVAKPRSSRNSSIESFVVCRRYSPPXEEGWRARSAFKLLQIN 223
Query: 203 RKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
+F+ VDLCAAPG W QV + + ++
Sbjct: 224 EEFDIFTGVTKAVDLCAAPGSWSQVLSRKLRGNA 257
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+AFKL+Q+N +F+ VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLLQINEEFDIFTGVTKAVDLCAAPGSWSQVLSRKLRGNA 67
>gi|156836549|ref|XP_001642330.1| hypothetical protein Kpol_251p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156112834|gb|EDO14472.1| hypothetical protein Kpol_251p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 313
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 57/112 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I K D V DG+P+V D Y Q L + AL+L + ILK G
Sbjct: 100 DITHPKTLAKILELFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKTG 159
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+FR +D L LF+RV KP++SR S E F+VC Y P
Sbjct: 160 GTFIAKIFRGRDIDLLYSQLGFLFKRVICAKPRSSRGTSLEAFIVCMDYSPP 211
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMA 234
+GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + +
Sbjct: 19 QGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLFT 67
>gi|55726462|emb|CAH90000.1| hypothetical protein [Pongo abelii]
Length = 319
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + K D+V+ G+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCGGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|386002741|ref|YP_005921040.1| ribosomal RNA large subunit methyltransferase E [Methanosaeta
harundinacea 6Ac]
gi|357210797|gb|AET65417.1| Ribosomal RNA large subunit methyltransferase E [Methanosaeta
harundinacea 6Ac]
Length = 258
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 1 MEDITTDKCRIA------ITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKL 54
++ +TT K I + E K DVV+ D +PN+ NW D L+ AL++
Sbjct: 75 IDGVTTIKADITAPETLELIVEALGGKADVVICDAAPNLSGNWTLDHARSIDLSRSALRV 134
Query: 55 ASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
A +LK GG F+ KVF+ + L + F+R S P ASRKESAE++VV Q + P
Sbjct: 135 AESVLKPGGNFLVKVFQGDTFLDYLSEVRVRFRRAQSHSPAASRKESAEMYVVGQGFFIP 194
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYR+R+AFKL Q+N++F +++ +DL AAPGGW+QVAK+
Sbjct: 17 GYRARSAFKLQQINQRFRLIRRGDAVLDLGAAPGGWLQVAKE 58
>gi|347971002|ref|XP_318425.5| AGAP003974-PA [Anopheles gambiae str. PEST]
gi|333469586|gb|EAA13594.5| AGAP003974-PA [Anopheles gambiae str. PEST]
Length = 307
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L L AL + + +L GG FV K+FR KD TSLL+
Sbjct: 116 KAQLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTPGGTFVAKIFRGKD-TSLLY 174
Query: 81 I-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F+RV KP +SR S E FVVCQ Y P + +P
Sbjct: 175 SQLRIFFERVTIAKPPSSRNSSIEAFVVCQDYRPPEGYVPQLINP 219
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
G+R+R+AFKLI ++ F+ VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAFKLIHIDEVFQIFDGVTRAVDLCAAPGSWSQVLSKRLYES 66
>gi|255083873|ref|XP_002508511.1| predicted protein [Micromonas sp. RCC299]
gi|226523788|gb|ACO69769.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D + Q L L L + + IL +GG +V K+FR KD L
Sbjct: 119 KADLVISDGAPDVTGLHDMDEFMQAQLILAGLTVCTHILADGGTYVAKIFRGKDCALLYS 178
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F++V KP++SR S E FVVCQ Y P
Sbjct: 179 QLKLFFKQVTCAKPKSSRNSSIEAFVVCQEYSPP 212
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ F+ L+ K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDDSFDILKNVKNVVDLCAAPGSWSQVLSRRI 63
>gi|344228963|gb|EGV60849.1| hypothetical protein CANTEDRAFT_109917 [Candida tenuis ATCC 10573]
Length = 299
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 57/109 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I E D V DG+P+V D Y Q L L AL+L + ILK G
Sbjct: 94 DITHPKTLQRILDEFHGELADFVCSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF++V KP++SR S E F+VC +Y
Sbjct: 154 GTFVAKIFRGRDIDLLYSQLSYLFEKVICAKPRSSRGSSLEAFIVCLNY 202
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QLN +FE + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLNEQFELFKGISKVVDLCAAPGSWSQVLSREL 63
>gi|431893580|gb|ELK03443.1| Putative ribosomal RNA methyltransferase 1 [Pteropus alecto]
Length = 332
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VCQ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|190345428|gb|EDK37311.2| hypothetical protein PGUG_01409 [Meyerozyma guilliermondii ATCC
6260]
Length = 293
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + +LKEG
Sbjct: 94 DITHPKTLQRILDIFGGEPADFVCSDGAPDVTGLHDLDEYIQAQLVLCALQLTTCVLKEG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF+RV KP+ASR S E F+VC Y
Sbjct: 154 GTFVAKIFRGRDIDLLYSQLGHLFERVVCAKPRASRGTSLEAFIVCIGY 202
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+AFKL+QL+ +F K VDLCAAPG W QV + + +S
Sbjct: 20 GWRARSAFKLLQLDEEFGLFSGVKRVVDLCAAPGSWSQVLSREIYKNS 67
>gi|222423600|dbj|BAH19769.1| AT5G01230 [Arabidopsis thaliana]
Length = 309
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ D +P+V D + Q L L L + + ILKEG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDDAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + +
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPR 218
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQL 63
>gi|302779940|ref|XP_002971745.1| hypothetical protein SELMODRAFT_95614 [Selaginella moellendorffii]
gi|300160877|gb|EFJ27494.1| hypothetical protein SELMODRAFT_95614 [Selaginella moellendorffii]
Length = 297
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + + D+V+ DG+P+V D + Q L L AL + + +L+ G
Sbjct: 98 DITSARTAELVIQHFHGCQADLVVCDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
FV KVFR KD + L K F V TKP++SR S E FVVC+ Y P
Sbjct: 158 AKFVAKVFRGKDISLLYAQLKMFFTTVTCTKPKSSRNSSIEAFVVCEDYQPP 209
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+AFKL+Q++ +F LQ K VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAFKLLQIDEEFGILQGVKRVVDLCAAPGSWSQVLSRQLYVPS 67
>gi|225440636|ref|XP_002278921.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Vitis
vinifera]
gi|297740237|emb|CBI30419.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + +LK+G
Sbjct: 101 DITNARTAELVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKKG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G F+ K+FR KD TSLL+ K F V KP++SR S E F VC++Y P + K
Sbjct: 161 GKFIAKIFRGKD-TSLLYCQLKLFFPIVTFAKPKSSRNSSIEAFAVCENYSPPEGFNEK 218
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLF 64
>gi|320581605|gb|EFW95825.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ogataea parapolymorpha
DL-1]
Length = 299
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 58/109 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K D V DG+P+V D Y Q L L AL+LA+ +LKEG
Sbjct: 93 DITDPRTLDKILHIFGGEKADFVCSDGAPDVTGLHDLDEYIQAQLVLCALRLATCLLKEG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF++V KP+ASR S E F+VC Y
Sbjct: 153 GTFVAKIFRGRDIDLLYSQLGFLFEKVVCAKPRASRGTSLESFIVCIGY 201
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+A+KL+QLN +F VDLCAAPG W QV + +
Sbjct: 20 GWRARSAYKLLQLNEQFGLFNNIHRVVDLCAAPGSWSQVLSREIF 64
>gi|365762119|gb|EHN03729.1| Trm7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842223|gb|EJT44474.1| TRM7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 310
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I + K D V DG+P+V D Y Q L + AL+L + ILK+G
Sbjct: 99 DITHPKTLARILKLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR +D L LF ++ KP++SR S E F+VC Y P+ K
Sbjct: 159 GIFVAKIFRGRDIDMLYSQLGHLFDKIVCAKPRSSRGTSLEAFIVCLGYNPPSNWTPKL 217
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMM 233
+GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + +
Sbjct: 19 QGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLF 66
>gi|325180137|emb|CCA14539.1| ribosomal RNA methyltransferase putative [Albugo laibachii Nc14]
Length = 264
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT++K I R + K +V+ DG+P+V GM+ V D + Q L AL +++ +L+E
Sbjct: 107 DITSEKTVAEIARHFRGRKAQIVVCDGAPDVTGMHDV-DEFLQAELLHAALNVSAHVLEE 165
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
GG FV K+F K Y L F F V +KP++SR +S E F++ Q + P
Sbjct: 166 GGTFVAKIFHCKQYELLASQFALFFANVSRSKPESSRVQSNEAFIIGQQFRLPNTYKAS- 224
Query: 122 FDPKYAFKELGAEDGKLNALKKKQVEKSKALGY 154
P GA++G + + + GY
Sbjct: 225 ISPYSLAGSKGAKEGNFDPILVPYMASGDLSGY 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV + + +
Sbjct: 23 FRARSAFKLLQLDDQFDLFNDVQRAVDLCAAPGSWSQVLSRKLYS 67
>gi|448103650|ref|XP_004200088.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
gi|359381510|emb|CCE81969.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
Length = 332
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + +LK G
Sbjct: 126 DITHPKTLQKILEIFGGEPADFVCSDGAPDVTGLHDLDEYIQSQLILAALQLTTCVLKPG 185
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF+RV KP+ASR S E F+VC Y
Sbjct: 186 GTFVAKIFRGRDIDLLYSQLSYLFERVICAKPRASRGTSLEAFIVCIGY 234
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV
Sbjct: 52 GWRARSAFKLLQLDEEFDLFKDVKRAVDLCAAPGSWSQV 90
>gi|225712472|gb|ACO12082.1| ribosomal RNA methyltransferase 1 [Lepeophtheirus salmonis]
Length = 297
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
++V+ DG+P+V D Y Q L L AL + + ILK GG FV K+FR KD +++
Sbjct: 110 ELVVCDGAPDVTGLHDIDEYIQGHLLLAALNITTHILKPGGSFVAKIFRGKDVSTIYSQL 169
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F V+ KP +SR S E FVVCQ+Y P +P
Sbjct: 170 RLFFDSVYVAKPPSSRNSSKESFVVCQNYNPPPGFVPCMINP 211
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQVAKQNMMASSII 238
G+R+R+AFKLIQ+N +F + + VDLCAAPG W QV + + S+I
Sbjct: 20 GWRARSAFKLIQINDEFNLINSDVQNVVDLCAAPGSWSQVLAKKITGKSVI 70
>gi|195036840|ref|XP_001989876.1| GH18555 [Drosophila grimshawi]
gi|193894072|gb|EDV92938.1| GH18555 [Drosophila grimshawi]
Length = 356
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + AI K +V+ DG+P+V + +DAY Q L L AL +A+ IL+EG
Sbjct: 97 DITKESTADAIIEFFGGKKAQLVVSDGAPDVTGSHDWDAYMQAQLLLSALSIATYILEEG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA-----KL 117
G F+ KV+R+ + + + ++ F+ V KP ASR S E FVV + + PA L
Sbjct: 157 GSFMGKVYRAANTSKVYLQLQRFFKDVCVFKPSASRNSSIEAFVVARQFSLPAGHVPCNL 216
Query: 118 DTKFFD-PKYAFKELGAEDG 136
T++++ P+ A K + G
Sbjct: 217 ITEWYNIPEEALKNTTGKQG 236
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F L+ + VDLCAAPGGW QV + M
Sbjct: 19 QGWRARSAFKLLQADETFNLLEGVERAVDLCAAPGGWSQVLSRRM 63
>gi|195110569|ref|XP_001999852.1| GI24754 [Drosophila mojavensis]
gi|193916446|gb|EDW15313.1| GI24754 [Drosophila mojavensis]
Length = 382
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + K ++V+ DG+P+V +DAY Q L L L +A+ IL+EG
Sbjct: 97 DITKESTAEEIIKFFDGKKAELVVTDGAPDVTGLHDWDAYMQAELLLSGLSIATYILEEG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-----APAKL 117
G F+ KV+R+ + + + ++ F+ V KP ASR S E FVVC+ + P L
Sbjct: 157 GTFMGKVYRAANTSRVYLQLQRFFKDVCLFKPSASRSSSIEAFVVCRQFTMPEGHVPCNL 216
Query: 118 DTKFFD-PKYAFKELGA 133
++FD P+ A K +
Sbjct: 217 TLEWFDKPEEALKNISG 233
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F L+ VDLCAAPGGW QV + M
Sbjct: 19 QGWRARSAFKLLQADETFNLLEGLTRAVDLCAAPGGWSQVLSKRM 63
>gi|150400217|ref|YP_001323984.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus vannielii
SB]
gi|189040315|sp|A6USA0.1|RLME_METVS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150012920|gb|ABR55372.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus vannielii
SB]
Length = 259
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 56/91 (61%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K DV++ D SPN+ W D LT AL A+ +LK+GG FV KVF+ + +
Sbjct: 113 KPDVIICDASPNISGVWDVDHTRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFYKYVE 172
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + F + +TKP+ASR+ESAE++V+ +HY
Sbjct: 173 LVSEYFDKAFTTKPRASREESAEVYVIAKHY 203
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
K YRSRA +KL QLN KF +++ V VDL APGGW+Q A+
Sbjct: 24 KNYRSRATYKLFQLNEKFNIIKEKNVVVDLGCAPGGWLQAAR 65
>gi|145347186|ref|XP_001418056.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578284|gb|ABO96349.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 3 DITT-DKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT+ DK R + D+++ DG+P+V D + Q L L L +A+ ILK
Sbjct: 100 DITSMDKVR-EVLSHFDGKHADLIVGDGAPDVTGLHDLDEFMQAQLILAGLTVATHILKP 158
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG F+ K+FR KD + L K F V KP++SR S E F+VCQ Y P
Sbjct: 159 GGTFIAKIFRGKDISLLYSQLKIFFPEVTCAKPKSSRNSSIEAFIVCQGYSPP 211
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q++ F+ + + VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLLQIDESFDIFRDVRHVVDLCAAPGSWSQVLSRKLYLPAL 68
>gi|351706512|gb|EHB09431.1| Putative ribosomal RNA methyltransferase 1 [Heterocephalus glaber]
Length = 372
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 146 DITQLSTAKEIIQHFEGCHADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 204
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T L + F V +KP++SR S E F VC+ Y P
Sbjct: 205 GGCFVAKIFRGRDVTLLYSQLRVFFSSVLCSKPRSSRNSSIEAFAVCRGYDPP 257
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA---SSIIHFDDESV 245
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + S ++ D +++
Sbjct: 75 GWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIRGQGPSHVVAVDLQAM 134
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 135 APLPG-VVQIQ 144
>gi|308467426|ref|XP_003095961.1| hypothetical protein CRE_06935 [Caenorhabditis remanei]
gi|308244230|gb|EFO88182.1| hypothetical protein CRE_06935 [Caenorhabditis remanei]
Length = 331
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + K D+V+ DG+P+V D + Q L L A + S +L+ G
Sbjct: 92 DITSVDTANQVIEHFSGDKSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLRPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+FRS++ + L K+ F++V+ KP++SR+ S E FV+C Y P
Sbjct: 152 GNFLAKIFRSRNSSLLYAQMKRYFKKVYLAKPRSSRQSSCEAFVLCLDYSPP 203
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKL+Q++ +F+ L+ + VDLCAAPG W QV + +
Sbjct: 21 WRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLF 64
>gi|146180987|ref|XP_001021884.2| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|146144344|gb|EAS01639.2| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 329
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + K K ++V+ DG+P+V D Y Q L + AL + + LK+G
Sbjct: 164 DITKKETVDEILHKFKGNKANLVIDDGAPDVTGFHDIDQYLQSQLMVAALNICNETLKKG 223
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+F+ D L FK F+ V+ KP++SR S E F+VC Y P +
Sbjct: 224 GHFVAKIFKGTDIKFLYSQFKLFFKSVYVVKPKSSRASSVENFLVCLQYDPPQSFENSTT 283
Query: 123 DPKYAFK 129
Y F+
Sbjct: 284 KSLYTFQ 290
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+R+R+A+KL+Q++ F + ++ +DLCAAPG W QV + +
Sbjct: 86 FRARSAYKLLQIDEVFGIFENAERVIDLCAAPGSWSQVVSKKL 128
>gi|401626878|gb|EJS44796.1| trm7p [Saccharomyces arboricola H-6]
Length = 310
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I + K D V DG+P+V D Y Q L + AL+L + +LK+G
Sbjct: 99 DITHPKTLARILKLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACVLKKG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR +D L LF R+ KP++SR S E F+VC Y P+ K
Sbjct: 159 GIFVAKIFRGRDIDMLYSQVGYLFDRIVCAKPRSSRGTSLEAFIVCLGYNPPSSWTPKL 217
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMASS 236
+GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + + + S
Sbjct: 19 QGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLFSDS 69
>gi|340384394|ref|XP_003390697.1| PREDICTED: hypothetical protein LOC100636976 [Amphimedon
queenslandica]
Length = 738
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + IT + D+V+ DG+P+V D Y Q L L AL + + +L G
Sbjct: 525 DITKETTAKEITSHFEGSCADLVVCDGAPDVTGLHDLDEYIQSHLLLAALNITTHVLSIG 584
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G FV+K+FR KD L F V+ KP++SR S E FVVC +Y P
Sbjct: 585 GTFVSKIFRGKDVNLLFHQLSLFFSSVYCVKPRSSRNSSIESFVVCVNYNPPT 637
>gi|345484992|ref|XP_003425169.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
2 [Nasonia vitripennis]
Length = 322
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I D+V+ DG+P+V D Y Q L L ALK+ + ILK
Sbjct: 102 DITNVTTAEQIIAHFGNEHADLVVCDGAPDVTGLHDMDIYIQSQLLLAALKITTQILKPK 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD + L K F V KP++SR S E FVVC+ + P +
Sbjct: 162 GTFVAKIFRAKDASLLYSQLKIFFTSVTCAKPRSSRNSSFEAFVVCKDFCPPEGFEPSSL 221
Query: 123 DP 124
+P
Sbjct: 222 NP 223
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDDEFNIFNGVTKAVDLCAAPGSWSQVLSRRL 63
>gi|333911590|ref|YP_004485323.1| ribosomal RNA large subunit methyltransferase E [Methanotorris
igneus Kol 5]
gi|333752179|gb|AEF97258.1| Ribosomal RNA large subunit methyltransferase E [Methanotorris
igneus Kol 5]
Length = 245
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T ++ I L K VV+ D SPN+ W D LT ALK+A+ +LKE
Sbjct: 96 DMTKEETIQKIREILYPAKPTVVISDASPNISGVWDVDHARSIELTTIALKIATQLLKER 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
G FV KVF+ + + + ++ F++V+ TKP+ASRKES+E++VV + Y
Sbjct: 156 GNFVVKVFQGDMFMDYVSLVEKYFEKVYPTKPRASRKESSEVYVVAKRYTG 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVLKH 248
YRSRA FKL QLN KF F+++ + VDL APGGW+Q A++ + ++ D +SV
Sbjct: 26 YRSRATFKLFQLNEKFRFMKEGDIVVDLGCAPGGWLQAAREIVGDRGFVVGVDLQSVKPL 85
Query: 249 PSTTVE 254
P V+
Sbjct: 86 PYDNVK 91
>gi|328848748|gb|EGF97947.1| hypothetical protein MELLADRAFT_84132 [Melampsora larici-populina
98AG31]
Length = 294
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
M DIT + AI K D+V+ DG+P+V D + Q L L AL + +L+
Sbjct: 98 MGDITQIETAQAIMSYFNGQKTDLVVCDGAPDVTGLHDLDEFVQAQLLLAALNITLSLLR 157
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
EGG FV K+F+ +D LL F+ V + KP++SR S E FV+C++Y P
Sbjct: 158 EGGSFVAKIFKGRDVGLLLSQLDCFFEEVSTFKPKSSRDSSIESFVICRNYKPP 211
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFL----QKSKVCVDLCAAPGGWMQV 227
GYR+R+A+KLI L++ + Q K VDLCAAPG W QV
Sbjct: 20 GYRARSAYKLIHLDQHYHLFNNPNQPIKTVVDLCAAPGSWSQV 62
>gi|426257095|ref|XP_004022170.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Ovis aries]
Length = 329
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VC+ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCKGYDPP 202
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|19115658|ref|NP_594746.1| tRNA 2'-O-ribose methyltransferase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|9910977|sp|O36015.1|YEK3_SCHPO RecName: Full=Putative ribosomal RNA methyltransferase C4F10.03c;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2656003|emb|CAB11724.1| tRNA 2'-O-ribose methyltransferase (predicted) [Schizosaccharomyces
pombe]
Length = 285
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I D+V+ DG+P+V D Y Q + L A LA +LK G
Sbjct: 99 DITHPNTLSIILSHFGNEPADLVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR +D + L + +F++V KP++SR S E FVVC+ + P+
Sbjct: 159 GKFVAKIFRGRDVSLLYSQLRLMFRKVSCAKPRSSRASSIESFVVCEDFNPPSNFQPDLT 218
Query: 123 DP 124
P
Sbjct: 219 KP 220
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QLN +F + +K VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVLSRELL 64
>gi|303275988|ref|XP_003057288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461640|gb|EEH58933.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 343
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+++ DG+P+V D + Q L L L + + IL+ GG ++ KVFR KD L
Sbjct: 120 DLIVSDGAPDVTGLHDMDEFMQAQLILAGLAVCAHILRPGGTYIAKVFRGKDVALLYAQL 179
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
K F +V KP++SR S E FVVCQ + P D K
Sbjct: 180 KMFFTQVTCAKPKSSRNSSVEAFVVCQDFRPPEGFDPK 217
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ F+ + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDDSFDVFKDVKHVVDLCAAPGSWSQVISRRL 63
>gi|68059132|ref|XP_671546.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487824|emb|CAI03817.1| hypothetical protein PB301372.00.0 [Plasmodium berghei]
Length = 325
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 25 VLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL-WIF 82
V+ DG+P++ GMN + D + Q L L +LK+ +LK GG F++K+FR +YTSLL +
Sbjct: 123 VVSDGAPDITGMNDI-DEFIQSQLILSSLKVCCSVLKIGGNFISKIFRG-EYTSLLIFHL 180
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
+ F++++ KPQ+SR +S E F+VC ++ P T F
Sbjct: 181 NKFFEKIYVCKPQSSRNKSLESFLVCLNFHLPKSSITSLF 220
>gi|410670198|ref|YP_006922569.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanolobus
psychrophilus R15]
gi|409169326|gb|AFV23201.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanolobus
psychrophilus R15]
Length = 258
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+D+ I + VDVV+ D +PN+ NW D LT AL+ A ILK G
Sbjct: 84 DITSDRTIEKIVEMVGLRGVDVVICDAAPNLSGNWSLDHARSIDLTTSALECAKKILKPG 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV KVF+ + L + F + S P ASR +SAEI+V+ + ++ + F
Sbjct: 144 GHFVVKVFQGDMFKDFLNKMDKNFTFMRSYTPDASRSQSAEIYVIGKKFLTSPVRKGEEF 203
Query: 123 DPKYAFKELGAE-DGKL 138
D + KELGA DG +
Sbjct: 204 DVE--IKELGASGDGAV 218
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRA++KL Q+N K + ++ VDL AAPGGW++VAK ++ II D
Sbjct: 17 GFRSRASYKLFQINEKHQLIKSGDTVVDLGAAPGGWLEVAK-DLSGGRIIGVD 68
>gi|124506721|ref|XP_001351958.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
gi|23504986|emb|CAD51769.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
Length = 507
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 24 VVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
V+ DG+P++ GMN + D + Q L L +LK+ +LK GG F++K+FR + L+
Sbjct: 211 TVVSDGAPDITGMNDI-DEFIQSQLILSSLKVCCSVLKVGGNFISKIFRGEHTGLLILHL 269
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ FQRV+ KPQ+SR +S E F+VC ++ P
Sbjct: 270 NKFFQRVYICKPQSSRNKSLESFLVCLNFSLP 301
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 22/64 (34%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSK-------------------VC---VDLCAAPGGWMQ 226
GYR+R++FKLIQ+N KF L+ K C VDLCAAPG W Q
Sbjct: 20 GYRARSSFKLIQINEKFGILKLFKPDIYNCNNEKDLINIYNEHYCYNIVDLCAAPGSWSQ 79
Query: 227 VAKQ 230
V K
Sbjct: 80 VLKN 83
>gi|301096605|ref|XP_002897399.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262107090|gb|EEY65142.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 302
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + + K VV+ DG+P+V D Y Q L L L ++ IL++G
Sbjct: 89 DITHKATADEIVAQFRGQKAQVVVSDGAPDVLGLHDLDEYLQAQLVLAGLNISLQILEDG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR K+ + L ++ F +V KP+ SR S E FVVCQ + P
Sbjct: 149 GTFVAKLFRGKEVSLLYAQLRRFFSKVTCAKPKTSRNSSFEAFVVCQDFHLP 200
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+AFKL+QL+ KF L + VDLCAAPGGW QV + + S I
Sbjct: 19 QGYRARSAFKLLQLDDKFGLLSGATRVVDLCAAPGGWSQVIAERVPKDSTI 69
>gi|398364565|ref|NP_009617.3| Trm7p [Saccharomyces cerevisiae S288c]
gi|586500|sp|P38238.1|TRM7_YEAST RecName: Full=tRNA
(cytidine(32)/guanosine(34)-2'-O)-methyltransferase;
AltName: Full=tRNA (uridine-2'-O-)-methyltransferase
TRM7
gi|536303|emb|CAA85004.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946453|gb|EDN64675.1| 2'-O-ribose tRNA anticodon loop methyltransferase [Saccharomyces
cerevisiae YJM789]
gi|190408775|gb|EDV12040.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Saccharomyces
cerevisiae RM11-1a]
gi|207347732|gb|EDZ73814.1| YBR061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271915|gb|EEU06940.1| Trm7p [Saccharomyces cerevisiae JAY291]
gi|285810396|tpg|DAA07181.1| TPA: Trm7p [Saccharomyces cerevisiae S288c]
gi|290878080|emb|CBK39139.1| Trm7p [Saccharomyces cerevisiae EC1118]
gi|323310224|gb|EGA63416.1| Trm7p [Saccharomyces cerevisiae FostersO]
gi|323334541|gb|EGA75915.1| Trm7p [Saccharomyces cerevisiae AWRI796]
gi|323338635|gb|EGA79851.1| Trm7p [Saccharomyces cerevisiae Vin13]
gi|323349695|gb|EGA83910.1| Trm7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356040|gb|EGA87845.1| Trm7p [Saccharomyces cerevisiae VL3]
gi|349576439|dbj|GAA21610.1| K7_Trm7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300898|gb|EIW11987.1| Trm7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 310
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I + K D V DG+P+V D Y Q L + AL+L + ILK+G
Sbjct: 99 DITHPKTLARILKLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR +D L LF ++ KP++SR S E F+VC Y P+ K
Sbjct: 159 GTFVAKIFRGRDIDMLYSQLGYLFDKIVCAKPRSSRGTSLEAFIVCLGYNPPSNWTPKL 217
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMM 233
+GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + +
Sbjct: 19 QGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLF 66
>gi|440912770|gb|ELR62311.1| Putative ribosomal RNA methyltransferase 1 [Bos grunniens mutus]
Length = 320
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VC+ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCKGYDPP 202
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 20 GWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|345097023|gb|AEN68013.1| cell division protein [Heliconius numata aurora]
Length = 246
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +E + D+V+ DG+P+V D Y Q L L AL + + +LKEG
Sbjct: 81 DITKISTAHEIIKEFEGLXADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKEG 140
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
FV K+FR KD L K F V +KP++SR S E FV+CQ+Y AP
Sbjct: 141 -VFVAKIFRGKDVXLLYSQLKLFFDFVTVSKPRSSRNSSIEXFVICQNYKAPPGYVPTMV 199
Query: 123 DP 124
+P
Sbjct: 200 NP 201
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q+N ++ + VDLCAAPG W QV
Sbjct: 6 GWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQV 44
>gi|167526100|ref|XP_001747384.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774219|gb|EDQ87851.1| predicted protein [Monosiga brevicollis MX1]
Length = 302
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 60/122 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + D+V+ DG+P+V D Y Q L L AL +++ +LK G
Sbjct: 93 DITKEATAQEIVQHFDGGYADLVVSDGAPDVTGLHDIDEYVQSQLILAALNISTHVLKRG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+ K+FR +D L + F V +KP++SR S E FVVC Y P
Sbjct: 153 GTFIAKIFRGRDVQLLYAQLETFFDVVTCSKPRSSRNSSIEAFVVCVGYNPPEGYTPHMS 212
Query: 123 DP 124
+P
Sbjct: 213 NP 214
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+AFKL+QL+ +F+ + + VDLCAAPG W QV Q +
Sbjct: 20 GYRARSAFKLLQLDEEFDIFRNVERVVDLCAAPGSWSQVLSQKL 63
>gi|50424141|ref|XP_460657.1| DEHA2F06842p [Debaryomyces hansenii CBS767]
gi|49656326|emb|CAG88989.1| DEHA2F06842p [Debaryomyces hansenii CBS767]
Length = 301
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + ILK G
Sbjct: 94 DITHPKTLQKILEIFGGEPADFVCSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF+RV KP++SR S E F+VC Y
Sbjct: 154 GAFVAKIFRGRDIDLLYSQLSYLFERVICAKPRSSRGTSLEAFIVCLGY 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+AFKL+QLN +F+ + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLNEQFQLFKGVKRVVDLCAAPGSWSQVLSRELF 64
>gi|323306102|gb|EGA59836.1| Trm7p [Saccharomyces cerevisiae FostersB]
Length = 233
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 59/113 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I + K D V DG+P+V D Y Q L + AL+L + ILK+G
Sbjct: 99 DITHPKTLARILKLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G FV K+FR +D L LF ++ KP++SR S E F+VC Y P+
Sbjct: 159 GTFVAKIFRGRDIDMLYSQLGYLFDKIVCAKPRSSRGTSLEAFIVCLGYNPPS 211
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMASS 236
+GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + + S
Sbjct: 19 QGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLFDES 69
>gi|156547729|ref|XP_001605414.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Nasonia vitripennis]
Length = 311
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I D+V+ DG+P+V D Y Q L L ALK+ + ILK
Sbjct: 91 DITNVTTAEQIIAHFGNEHADLVVCDGAPDVTGLHDMDIYIQSQLLLAALKITTQILKPK 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR+KD + L K F V KP++SR S E FVVC+ + P +
Sbjct: 151 GTFVAKIFRAKDASLLYSQLKIFFTSVTCAKPRSSRNSSFEAFVVCKDFCPPEGFEPSSL 210
Query: 123 DP 124
+P
Sbjct: 211 NP 212
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ---NMMASSIIHFD 241
G+R+R+AFKL+Q++ +F VDLCAAPG W QV Q +++A II D
Sbjct: 20 GWRARSAFKLLQIDDEFNIFNGVTKAVDLCAAPGSWSQVLSQTSTDVVAPKIIAVD 75
>gi|118150968|ref|NP_001071402.1| putative ribosomal RNA methyltransferase 1 [Bos taurus]
gi|117306288|gb|AAI26604.1| FtsJ homolog 1 (E. coli) [Bos taurus]
gi|296470729|tpg|DAA12844.1| TPA: FtsJ homolog 1 [Bos taurus]
Length = 307
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VC+ Y P
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCKGYDPP 202
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|297460745|ref|XP_002701220.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Bos
taurus]
Length = 291
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 13 ITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK GG FV K+FR
Sbjct: 63 IIQHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKPGGCFVAKIFR 121
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+D T + + F V KP++SR S E F VC+ Y P
Sbjct: 122 GRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCKGYDPP 164
>gi|50556146|ref|XP_505481.1| YALI0F16049p [Yarrowia lipolytica]
gi|49651351|emb|CAG78290.1| YALI0F16049p [Yarrowia lipolytica CLIB122]
Length = 312
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I E D V DG+P+V D Y Q L L AL+L + +L+ G
Sbjct: 124 DITHPQTLKMILDEFGGEPADFVCSDGAPDVTGLHDLDEYTQAQLILSALQLTTQLLRPG 183
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D + + LF++V KP++SR S E F+VCQ Y
Sbjct: 184 GNFVAKIFRGRDIDLMYFQLGLLFEQVTCAKPRSSRGSSLESFIVCQGY 232
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+AFKL+QL+++F + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLDQQFHLFDGVQRVVDLCAAPGSWSQVLSRELF 64
>gi|50289623|ref|XP_447243.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526552|emb|CAG60176.1| unnamed protein product [Candida glabrata]
Length = 309
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K D V DG+P+V D Y Q L + AL+L + +LK G
Sbjct: 102 DITHPRTLERIYELFGNQKADFVCSDGAPDVTGLHDLDEYIQHQLIMSALQLTTCVLKRG 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----KLD 118
G FV K+FR +D L LF+++ KP++SR S E F+VC Y PA KLD
Sbjct: 162 GTFVAKIFRGRDIDMLYSQLGYLFEKIVCAKPRSSRGTSLEAFIVCIGYNPPAGWEPKLD 221
Query: 119 -----TKFF 122
T+FF
Sbjct: 222 VNSSVTEFF 230
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMA 234
GYR+R+A+KL+QLN +F FL ++ VDLCAAPG W QV + + A
Sbjct: 20 GYRARSAYKLLQLNEEFHFLDDPELKRVVDLCAAPGSWSQVLSRKLFA 67
>gi|320162925|gb|EFW39824.1| cell division protein [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 61/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + D+V+ DG+P+V D Y Q L L AL + + +L+
Sbjct: 107 DITKESTAQQIVAHFEGELADLVVCDGAPDVTGLHDIDEYIQAQLILAALNITTHVLRPD 166
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR KD + L K F+ V +KP++SR S E FVVC+ Y P
Sbjct: 167 GVFVAKIFRGKDVSLLYSQLKLFFRNVTCSKPRSSRNSSIEAFVVCRGYSPPVGFVPTMA 226
Query: 123 DP 124
+P
Sbjct: 227 NP 228
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQLDEEFQLFLNVRRAVDLCAAPGSWSQV 58
>gi|68072251|ref|XP_678039.1| ribosomal RNA methyltransferase [Plasmodium berghei strain ANKA]
gi|56498377|emb|CAH98756.1| ribosomal RNA methyltransferase, putative [Plasmodium berghei]
Length = 487
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 25 VLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL-WIF 82
V+ DG+P++ GMN + D + Q L L +LK+ +LK GG F++K+FR +YTSLL +
Sbjct: 227 VVSDGAPDITGMNDI-DEFIQSQLILSSLKVCCSVLKIGGNFISKIFRG-EYTSLLIFHL 284
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
+ F++++ KPQ+SR +S E F+VC ++ P T F
Sbjct: 285 NKFFEKIYVCKPQSSRNKSLESFLVCLNFHLPKSSITSLF 324
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 22/65 (33%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-------------------KSKVC---VDLCAAPGGWM 225
GYR+R+++KLIQ+N KFE + + C VDLCAAPG W
Sbjct: 19 NGYRARSSYKLIQINDKFEIFKLFNPNKYNNSDISEIIKKYNDEYCYNIVDLCAAPGSWS 78
Query: 226 QVAKQ 230
QV K
Sbjct: 79 QVLKN 83
>gi|344301534|gb|EGW31846.1| hypothetical protein SPAPADRAFT_140790 [Spathaspora passalidarum
NRRL Y-27907]
Length = 295
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 1 MEDITTDKCRIAITRELKTW-------KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALK 53
++ +TT + I L+T + D V DG+P+V D Y Q L L AL+
Sbjct: 81 IDGVTTIQADITHPNTLQTILDIFAGEQADFVCSDGAPDVTGLHDLDEYIQAQLILSALQ 140
Query: 54 LASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L + +LK GG FV K+FR +D L LF+RV KP+ASR S E F+VC Y
Sbjct: 141 LTTCLLKPGGTFVAKIFRGRDIDLLYSQLSYLFERVICAKPRASRGTSLEAFIVCLGY 198
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QLN++F VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLNQEFNLFDGITRVVDLCAAPGSWSQVLSREL 63
>gi|260944280|ref|XP_002616438.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850087|gb|EEQ39551.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 301
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + ILK G
Sbjct: 94 DITHPKTLQKILDLFGGEPADFVCSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF+RV KP++SR S E F+VC Y
Sbjct: 154 GTFVAKIFRGRDIDLLYSQLGYLFERVICAKPRSSRGTSLEAFIVCLGY 202
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q+N +F + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQINEQFNIFDGVRRVVDLCAAPGSWSQVLSREL 63
>gi|397572922|gb|EJK48467.1| hypothetical protein THAOC_32733 [Thalassiosira oceanica]
Length = 327
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ +I + + + ++V+ DG+P+V +D Y Q L L A+ +A+ ++ EG
Sbjct: 117 DITSIDTAKSIIQHFEGERAELVVCDGAPDVTNRHSFDEYIQSQLLLAAINIATHVICEG 176
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D + + LF +V KP ASR S E FVVCQ +
Sbjct: 177 GTFVAKIFRGRDVGLIYTQLELLFGQVTCAKPTASRNASIESFVVCQRF 225
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 22/67 (32%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSK----------------------VCVDLCAAPGGWM 225
GYR+R+A+KL+Q++ +F L S VDLCAAPGGW
Sbjct: 19 SGYRARSAYKLLQIDSRFHLLGPSTDDNDDGTSRTDGSDGWRPPRVHRAVDLCAAPGGWS 78
Query: 226 QVAKQNM 232
QV Q M
Sbjct: 79 QVLAQCM 85
>gi|367013286|ref|XP_003681143.1| hypothetical protein TDEL_0D03480 [Torulaspora delbrueckii]
gi|359748803|emb|CCE91932.1| hypothetical protein TDEL_0D03480 [Torulaspora delbrueckii]
Length = 299
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + D+V+ DG+P+V D Y Q L + AL+LA +LK
Sbjct: 96 DITHPRTLQRILQLFGDEPADLVISDGAPDVTGLHDLDEYVQQQLVMSALQLACCVLKPK 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+ KVFR +D L LF V KP++SR S E FVVCQ Y PA K
Sbjct: 156 GSFIAKVFRGRDIDLLYSQLACLFTHVTCAKPRSSRSTSLEAFVVCQGYQPPADWTPK-L 214
Query: 123 DPKYAFKEL 131
DP + ++
Sbjct: 215 DPSQSVQQF 223
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMASS 236
GYR+R+A+KL+QLN F FL + VDLCAAPG W QV + + S
Sbjct: 20 GYRARSAYKLLQLNDNFHFLDDPSLKRVVDLCAAPGSWSQVLSRKLFEGS 69
>gi|254572155|ref|XP_002493187.1| 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of
nucleotides [Komagataella pastoris GS115]
gi|238032985|emb|CAY71008.1| 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of
nucleotides [Komagataella pastoris GS115]
gi|328352798|emb|CCA39196.1| ribosomal RNA large subunit methyltransferase E [Komagataella
pastoris CBS 7435]
Length = 311
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + ILK G
Sbjct: 97 DITHPKTLEKILEIFGGEPADFVCSDGAPDVTGLHDLDEYIQSQLILSALQLTTCILKPG 156
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR KD L LF+ V KP++SR S E F+VCQ Y
Sbjct: 157 GSFVAKIFRGKDIDLLYSQMGFLFEHVTCAKPRSSRGTSLESFIVCQGY 205
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QLN +F + + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLNEQFNLFKDVRRVVDLCAAPGSWSQVLSREL 63
>gi|242009665|ref|XP_002425603.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
gi|212509496|gb|EEB12865.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
Length = 334
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I +V+ DG+P+V D + Q L L A + S IL +G
Sbjct: 98 DITKLSTAKQIIEHFSGSPAQLVVCDGAPDVTGLHDIDEFVQSQLLLAAFNITSHILMKG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD T + K F+ V KP++SR S E FVVCQ+Y P
Sbjct: 158 GTFVAKIFRGKDITLIYSQLKIFFKFVTVAKPRSSRNSSIEAFVVCQNYQPP 209
>gi|448099854|ref|XP_004199235.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
gi|359380657|emb|CCE82898.1| Piso0_002654 [Millerozyma farinosa CBS 7064]
Length = 298
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + +LK G
Sbjct: 94 DITHPKTLQKILEIFGGEPADFVCSDGAPDVTGLHDLDEYIQSQLILAALQLTTCVLKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF++V KP+ASR S E F+VC Y
Sbjct: 154 GTFVAKIFRGRDIDLLYSQLSYLFEKVICAKPRASRGTSLEAFIVCIGY 202
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQLDEEFDLFKDVKRAVDLCAAPGSWSQV 58
>gi|331214017|ref|XP_003319690.1| ribosomal RNA large subunit methyltransferase E [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309298680|gb|EFP75271.1| ribosomal RNA large subunit methyltransferase E [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 299
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + +I + K D+V+ DG+P+V D + Q L L AL + +LK G
Sbjct: 100 DITKLETATSILSHFEGQKADLVVCDGAPDVTGLHDLDEFVQSQLLLAALNITLSVLKPG 159
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D + F V KP++SR S E FVVC++Y P
Sbjct: 160 GTFVAKIFRGRDVNMIYDQLLNFFGEVDCAKPRSSRSSSIEAFVVCRNYAPP 211
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFL----QKSKVCVDLCAAPGGWMQV 227
GYR+R+A+KLI L+ + Q +DLCAAPG W QV
Sbjct: 20 GYRARSAYKLIHLDELYGLFNHPSQAVDRVIDLCAAPGSWSQV 62
>gi|395521570|ref|XP_003764891.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Sarcophilus harrisii]
Length = 327
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 59/122 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL +A +LK G
Sbjct: 92 DITKASTAREIIGHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR +D T L + F V KP++SR S E F VC+ + P +
Sbjct: 152 GNFVAKIFRGRDVTLLYSQLRLFFPDVVCAKPRSSRNSSIEAFAVCRGFALPQGYEPSML 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS----IIHFDDES 244
G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV + + S I+ D ++
Sbjct: 20 GWRARSAFKLLQLDEEFQLFSGVRRAVDLCAAPGSWSQVLSRKLGESGQPACIVAVDLQA 79
Query: 245 VLKHPSTTVEIQ 256
+ P V+IQ
Sbjct: 80 MAPLPG-VVQIQ 90
>gi|254582987|ref|XP_002499225.1| ZYRO0E06952p [Zygosaccharomyces rouxii]
gi|238942799|emb|CAR30970.1| ZYRO0E06952p [Zygosaccharomyces rouxii]
Length = 291
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 56/112 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I + D V DG+P+V D Y Q L + AL+L ILK G
Sbjct: 96 DITHPRTLHQILELFGNHRADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTVCILKRG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D + LF +V KP++SR S E FVVCQ Y P
Sbjct: 156 GTFVAKIFRGRDIDLIYAQLGYLFDQVTCAKPRSSRGSSLEAFVVCQGYNPP 207
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMM 233
+GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + +
Sbjct: 19 QGYRARSAFKLLQLNEEFHFLDDPNLKRVVDLCAAPGSWSQVLSRKLF 66
>gi|170042115|ref|XP_001848783.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Culex
quinquefasciatus]
gi|167865651|gb|EDS29034.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Culex
quinquefasciatus]
Length = 306
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
+ +V+ DG+P+V D Y Q L L AL + + +L GG F+ K+FR D T L
Sbjct: 115 RAQLVICDGAPDVTGLHDIDEYIQSQLLLAALNITTHVLTIGGTFIAKIFRGHDTTLLYS 174
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F++V KP +SR S E FVVCQ Y P + +P
Sbjct: 175 QLRIFFEKVSIAKPASSRNSSIEAFVVCQQYKPPEGYVPQMINP 218
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS--------SIIHF 240
G+R+R+AFKLI L+ F + VDLCAAPG W QV + + S II
Sbjct: 20 GWRARSAFKLIHLDENFNIFEGVTRAVDLCAAPGSWSQVLSKKLYESRDKDKDDVKIIAV 79
Query: 241 DDESVLKHPSTT 252
D +++ P T
Sbjct: 80 DLQAMAPLPGVT 91
>gi|313237227|emb|CBY12443.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + I K D+V+ DG+P+V D Y Q L L A +++ +L G
Sbjct: 91 DITSQETSDEIITHFDGGKADLVVCDGAPDVTGLHDLDEYIQSQLILAAFNISTFVLSPG 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV+K+FR +D + F+ F+ V+ KP++SR S E FVV + P
Sbjct: 151 GTFVSKIFRGRDCDLIFHQFQMFFKNVYLAKPRSSRASSVEAFVVAIDFCPP 202
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q++ +F+ + VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLLQIDERFDLFKNVTKVVDLCAAPGSWSQVLSKKL 63
>gi|146419553|ref|XP_001485738.1| hypothetical protein PGUG_01409 [Meyerozyma guilliermondii ATCC
6260]
Length = 293
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + +LKEG
Sbjct: 94 DITHPKTLQRILDIFGGEPADFVCSDGAPDVTGLHDLDEYIQAQLVLCALQLTTCVLKEG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF+RV KP+A R S E F+VC Y
Sbjct: 154 GTFVAKIFRGRDIDLLYSQLGHLFERVVCAKPRALRGTSLEAFIVCIGY 202
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QL+ +F K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQLDEEFGLFSGVKRVVDLCAAPGSWSQVLSREI 63
>gi|348684386|gb|EGZ24201.1| hypothetical protein PHYSODRAFT_325341 [Phytophthora sojae]
Length = 301
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + + K VV+ DG+P+V D Y Q L L L ++ IL++G
Sbjct: 89 DITHKATADEIVAQFQGQKAQVVVSDGAPDVLGLHDLDEYLQAQLVLAGLNISLQILEDG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR K+ + L ++ F +V KP+ SR S E FVVCQ + P
Sbjct: 149 GTFVAKLFRGKEVSLLYAQLRRFFSKVTCAKPKTSRNSSFESFVVCQDFHLP 200
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+AFKL+QL+ KF L+ + VDLCAAPGGW QV + + S I
Sbjct: 19 QGYRARSAFKLLQLDDKFGLLRGATRVVDLCAAPGGWSQVIAERVPKDSTI 69
>gi|443732827|gb|ELU17391.1| hypothetical protein CAPTEDRAFT_159848 [Capitella teleta]
Length = 315
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL + + +LK+G
Sbjct: 94 DITKVSTAEDIISHFEGDHADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD + L + F V KP++SR S E FVVC+ Y P
Sbjct: 154 GTFVAKIFRGKDVSLLYSQLRIFFPSVTIAKPRSSRNSSIEAFVVCEKYSPP 205
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F+ Q K VDLCAAPG W QV Q +
Sbjct: 20 GWRARSAFKLLQIDEEFKIFQNVKKVVDLCAAPGSWSQVLSQKL 63
>gi|366996813|ref|XP_003678169.1| hypothetical protein NCAS_0I01590 [Naumovozyma castellii CBS 4309]
gi|342304040|emb|CCC71827.1| hypothetical protein NCAS_0I01590 [Naumovozyma castellii CBS 4309]
Length = 309
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I K D V DG+P+V D Y Q L + AL+L + ILK+G
Sbjct: 99 DITHPKTLKRILDLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G FV K+FR +D L LF +V KP++SR S E F+VC Y P+
Sbjct: 159 GIFVAKIFRGRDIDMLYSQLGYLFDKVVCAKPKSSRGTSLEAFIVCIGYNPPS 211
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QLN F FL + VDLCAAPG W QV Q +
Sbjct: 19 QGFRARSAFKLLQLNDDFHFLDDPNLKRVVDLCAAPGSWSQVLSQKLF 66
>gi|91773171|ref|YP_565863.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcoides
burtonii DSM 6242]
gi|121689250|sp|Q12WR3.1|RLME_METBU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91712186|gb|ABE52113.1| ribosomal RNA large subunit methyltransferase [Methanococcoides
burtonii DSM 6242]
Length = 267
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+D+ I + DVV+ D +PN+ NW D LT AL+ A ILK
Sbjct: 84 DITSDETIKKIIELVGEGGADVVICDAAPNLSGNWSLDHARSIDLTTSALECAKKILKPK 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAKLDTKF 121
G F+ KVF+ + + ++ F + P+ASR ESAEI+V+ + + AP K+D KF
Sbjct: 144 GHFIVKVFQGDMFKEYMDKVRESFTYTRAFSPKASRPESAEIYVIGKKLLTAPLKIDDKF 203
Query: 122 FDPKYAFKELGA 133
K++GA
Sbjct: 204 ---DVTIKKIGA 212
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAA+KL Q+N K E +++ VDL AAPGGW++VAK+ + I+ D
Sbjct: 17 GYRSRAAYKLFQINEKHEVIKEDDTIVDLGAAPGGWLEVAKK-ISGGKIVGVD 68
>gi|313242586|emb|CBY34717.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + I K D+V+ DG+P+V D Y Q L L A +++ +L G
Sbjct: 91 DITSQETSDEIIAHFDGGKADLVVCDGAPDVTGLHDLDEYIQSQLILAAFNISTFVLSPG 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV+K+FR +D + F+ F+ V+ KP++SR S E FVV + P
Sbjct: 151 GTFVSKIFRGRDCDLIFHQFQMFFKNVYLAKPRSSRASSVEAFVVAIDFCPP 202
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q++ +F+ + VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLLQIDERFDLFKNVTKVVDLCAAPGSWSQVLSKKL 63
>gi|358333999|dbj|GAA52447.1| tRNA methyltransferase [Clonorchis sinensis]
Length = 278
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT K I + +V+ DG+P+V D Y Q L L AL + S IL+ G
Sbjct: 102 DITTRKTANEIIERFEGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAALTICSRILQHG 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQ-RVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV KVFR +D L + LF +V KP++SR S E FVVCQ + P L +
Sbjct: 162 GTFVAKVFRGRDAGLLGSQLRCLFDGQVTFAKPKSSRNSSLEAFVVCQGFSGPRMLSSS- 220
Query: 122 FDPKYAFKE 130
DP ++ E
Sbjct: 221 VDPDHSSTE 229
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNM 232
G+R+R+A+KL+Q++ +F L+ S VDLCAAPG W QV + +
Sbjct: 20 GWRARSAYKLMQIDDEFGILKSSDSDPLERVVDLCAAPGSWSQVLAKRL 68
>gi|296109210|ref|YP_003616159.1| ribosomal RNA methyltransferase RrmJ/FtsJ [methanocaldococcus
infernus ME]
gi|295434024|gb|ADG13195.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanocaldococcus
infernus ME]
Length = 245
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 13 ITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRS 72
I RE K DVV+ D SPN+ +W D L AL++A+ +L++ G FV KVF
Sbjct: 109 ILRERGREKFDVVISDASPNISGHWAVDHARSVELVKTALQIATEMLRKDGHFVAKVFYG 168
Query: 73 KDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L + K+ F +V+ TKP+ASRKES+EI+++ + +
Sbjct: 169 DMVDELKNLAKKYFDKVYLTKPRASRKESSEIYLIAKRF 207
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
YRSRA FKL+Q+N KF FL+ + +DL APGGWM+ AK+ + +I
Sbjct: 26 YRSRAYFKLLQINEKFHFLKPKQAVLDLGCAPGGWMEAAKEIVGDQGLI 74
>gi|296419711|ref|XP_002839439.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635592|emb|CAZ83630.1| unnamed protein product [Tuber melanosporum]
Length = 227
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + R L D+V+ DG+P+V D Y Q L L AL LA+ +LK G
Sbjct: 13 DITHPSTLPLLLRHLGNKPADLVISDGAPDVTGLHDLDEYIQSQLLLAALNLATCVLKPG 72
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
G FV K+FR +D + + LF RV KP++SR S E FVVC+ Y PA
Sbjct: 73 GGFVAKIFRGRDVAIVFAQLRCLFDRVTCAKPRSSRGSSIEAFVVCEGYSPPAGF 127
>gi|449663261|ref|XP_002156663.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Hydra
magnipapillata]
Length = 299
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 56/112 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L A + S +LK+G
Sbjct: 95 DITKVSTANEIISHFEGEPADLVVCDGAPDVTGLHDIDEYIQGQLLLAAFNITSHVLKKG 154
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR KD L K F V KP++SR S E F+VC +Y P
Sbjct: 155 GNFVAKIFRGKDVNLLYSQMKLFFTDVTVCKPRSSRNSSIEAFIVCLNYFPP 206
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM-------ASSIIHFD 241
G+R+R+AFKL+Q+N +F+ VDLCAAPG W QV + ++ A I+ D
Sbjct: 20 GWRARSAFKLLQINEEFDLFTNVNRVVDLCAAPGSWSQVLSRKLIEERDQKNAVKIVAVD 79
Query: 242 DESVLKHPSTTVEIQ 256
+++ P ++IQ
Sbjct: 80 LQAMAPLPG-VIQIQ 93
>gi|356546653|ref|XP_003541738.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Glycine
max]
Length = 260
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + +LKEG
Sbjct: 42 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEG 101
Query: 63 GWFVTKVFRSKDYTSLLW--IF--KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
G F+ K+FR KD TSLL+ IF K F V K ++SR S E F VC++Y P +
Sbjct: 102 GKFIAKIFRGKD-TSLLYCQIFELKLFFPIVTFAKQKSSRNSSIEAFAVCENYSPPEGFN 160
Query: 119 TK 120
K
Sbjct: 161 PK 162
>gi|341889633|gb|EGT45568.1| hypothetical protein CAEBREN_09527 [Caenorhabditis brenneri]
Length = 225
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D + Q L L A + S +LK GG F+ K+FRS++ + L
Sbjct: 96 KSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKIGGNFLAKIFRSRNSSLLYA 155
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K+ F++V+ KP++SR+ S E FV+C Y P
Sbjct: 156 QMKKYFKKVYLAKPRSSRQSSCEAFVLCLDYSPP 189
>gi|410077187|ref|XP_003956175.1| hypothetical protein KAFR_0C00450 [Kazachstania africana CBS 2517]
gi|372462759|emb|CCF57040.1| hypothetical protein KAFR_0C00450 [Kazachstania africana CBS 2517]
Length = 316
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I K D V DG+P+V D Y Q L + AL+L + ILK+
Sbjct: 99 DITHPETLSKILHLFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKKN 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR +D L LF++V KP++SR S E F+VC Y P+ + K
Sbjct: 159 GTFVAKIFRGRDIDMLYSQLGYLFEKVICAKPKSSRGTSLEAFIVCLGYNPPSNWEPKL 217
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 188 KGYRSRAAFKLIQLNRKFEFL---QKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDES 244
+GYR+R+AFKL+QLN +F FL K VDLCAAPG W QV + M S + D +
Sbjct: 19 QGYRARSAFKLLQLNDEFHFLDDETNLKRVVDLCAAPGSWSQVLSRKMFTESKGNLDGKK 78
Query: 245 VLK---HPSTTVE 254
++ P + +E
Sbjct: 79 IVAVDLQPMSPIE 91
>gi|403342831|gb|EJY70740.1| Ribosomal RNA methyltransferase [Oxytricha trifallax]
Length = 262
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DITT + + K K D+V+ DG+P+V D Y Q L AL + +L+EG
Sbjct: 108 DITTQQTLEKVLAVFKGNKADLVVSDGAPDVTGFHEIDQYLQAQLLQAALTITQHMLREG 167
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
G FV K F+S D + L + KQ+F+ V+ KPQ+SR SAE FV+ ++ + L
Sbjct: 168 GTFVAKFFKSNDLSYLYVMMKQIFKNVYVVKPQSSRASSAEAFVIGLGFVENSSL 222
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDE 243
GYR+R+A+KL+Q++ +F+ Q VDLCAAPG W QV + +S DDE
Sbjct: 29 GYRARSAYKLLQIDDEFKIFQDVVRAVDLCAAPGSWSQVLANKLYSS-----DDE 78
>gi|302846344|ref|XP_002954709.1| hypothetical protein VOLCADRAFT_102215 [Volvox carteri f.
nagariensis]
gi|300260128|gb|EFJ44350.1| hypothetical protein VOLCADRAFT_102215 [Volvox carteri f.
nagariensis]
Length = 297
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++ + D+V+ DG+P+V D Y Q L L AL + +L+ G
Sbjct: 98 DITSEVTAKQVISHFDGQPADLVVCDGAPDVTGLHDLDEYVQAQLLLAALSIVCAVLRPG 157
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
G FV K+FR KD L K LF V+ KP++SR S E FVV + + P L
Sbjct: 158 GTFVAKIFRGKDVALLYSQLKLLFPEVYVAKPKSSRNSSIEAFVVGRRFDPPEAL 212
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+R+R+A+KL+Q++ F+ VDLCAAPG W QV + + ++ S
Sbjct: 20 GWRARSAYKLLQIDEAFDIFSGVAHAVDLCAAPGSWSQVLSRKLYLPAV-----RSGSPS 74
Query: 249 PSTTVEI 255
P T V +
Sbjct: 75 PPTIVAV 81
>gi|221054440|ref|XP_002258359.1| ribosomal rna methyltransferase [Plasmodium knowlesi strain H]
gi|193808428|emb|CAQ39131.1| ribosomal rna methyltransferase, putative [Plasmodium knowlesi
strain H]
Length = 534
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 24 VVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
V+ DG+P++ GMN + D + Q L L +LK+ +LK GG F++K+FR + L+
Sbjct: 225 AVVSDGAPDITGMNDI-DEFIQSQLILSSLKVCCSVLKIGGNFISKIFRGEHTGLLILHL 283
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F+RV+ KPQ+SR +S E F+VC ++ P
Sbjct: 284 NKFFERVYVCKPQSSRNKSLESFLVCLNFSLP 315
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 22/64 (34%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQ--KSKVC--------------------VDLCAAPGGWMQ 226
GYR+R++FKLIQ+N KF + K C VDLCAAPG W Q
Sbjct: 20 GYRARSSFKLIQINEKFGIFKLFDPKNCGERDVEKIRNIYNENFCYNIVDLCAAPGSWSQ 79
Query: 227 VAKQ 230
V K
Sbjct: 80 VLKN 83
>gi|290560982|gb|ADD37893.1| ribosomal RNA methyltransferase 1 [Lepeophtheirus salmonis]
Length = 297
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
++V+ DG+P+ D Y Q L L AL + + ILK GG FV K+FR KD +++
Sbjct: 110 ELVVCDGAPDATGLHDIDEYIQGHLLLAALNITTHILKPGGSFVAKIFRGKDVSTIYSQL 169
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F V KP +SR S E FVVCQ+Y P +P
Sbjct: 170 RLFFDSVFVAKPPSSRNSSKESFVVCQNYNPPPGFVPCMINP 211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQVAKQNMMASSII 238
G+R+R+AFKLIQ+N +F + + VDLCAAPG W QV + + S+I
Sbjct: 20 GWRARSAFKLIQINDEFNLINSDVQNVVDLCAAPGSWSQVLAKKITGKSVI 70
>gi|334328090|ref|XP_003341034.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Monodelphis domestica]
Length = 323
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + D+V+ DG+P+V D Y Q L L AL +A +LK G
Sbjct: 92 DITKASTAQEIIGHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPG 151
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR +D T L + F V KP++SR S E F VC+ + P
Sbjct: 152 GSFVAKIFRGRDVTLLYSQLRIFFPDVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSML 211
Query: 123 DP 124
+P
Sbjct: 212 NP 213
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM----MASSIIHFDDE 243
+G+R+R+AFKL+QL+ +F+ + VDLCAAPG W QV + + + I+ D +
Sbjct: 19 EGWRARSAFKLLQLDEEFQLFSGVRRAVDLCAAPGSWSQVLSRKLGEDESPACIVAVDLQ 78
Query: 244 SVLKHPSTTVEIQ 256
++ P V+IQ
Sbjct: 79 AMAPLPG-VVQIQ 90
>gi|406859183|gb|EKD12252.1| FtsJ-like methyltransferase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 500
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ L
Sbjct: 174 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLAMCVLRPGGKFVAKIFRGRNVDLLFAQ 233
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F+ V +KP++SR S E F+VC ++ P
Sbjct: 234 LKLFFEEVIVSKPRSSRASSVEAFIVCLNFSPP 266
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFADVTRVVDLCAAPGSWSQVLSRILI 64
>gi|389582926|dbj|GAB65662.1| ribosomal RNA methyltransferase [Plasmodium cynomolgi strain B]
Length = 537
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 24 VVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
V+ DG+P++ GMN + D + Q L L +LK+ +LK GG F++K+FR + L+
Sbjct: 230 AVVSDGAPDITGMNDI-DEFIQSQLILSSLKVCCSVLKIGGNFISKIFRGEHTGLLILHL 288
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F+RV+ KPQ+SR +S E F+VC ++ P
Sbjct: 289 NKFFERVYVCKPQSSRNKSLESFLVCLNFSLP 320
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 22/65 (33%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-------------------KSKVC---VDLCAAPGGWM 225
GYR+R++FKLIQ+N KF + C VDLCAAPG W
Sbjct: 19 NGYRARSSFKLIQINEKFGIFKLFDPEKYEKKDKDKIGDIYNENFCYNIVDLCAAPGSWS 78
Query: 226 QVAKQ 230
QV K
Sbjct: 79 QVLKN 83
>gi|66814044|ref|XP_641201.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74855831|sp|Q54VA8.1|RRMJ1_DICDI RecName: Full=rRNA methyltransferase 1 homolog; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 1
gi|60469225|gb|EAL67220.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 270
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I D+++ DG+P+V D Y Q L L AL + + LK G
Sbjct: 94 DITKYETSKQIISHFDGSLADLIISDGAPDVTGLHDIDFYGQSQLILSALNITTHTLKIG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+F+ D + + K F+ V KP +SR+ S E F++C++Y P + K
Sbjct: 154 GTFVAKMFKGDDMSLMYSQMKLFFEHVSFVKPSSSRESSLENFILCRNYQPPLNYNPKII 213
Query: 123 DP 124
DP
Sbjct: 214 DP 215
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
G+R+R+AFKLIQ++ +++ + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLIQIDEEYQIFEGVKRVVDLCAAPGSWSQVLSRRIYG 65
>gi|156097180|ref|XP_001614623.1| ribosomal RNA methyltransferase [Plasmodium vivax Sal-1]
gi|148803497|gb|EDL44896.1| ribosomal RNA methyltransferase, putative [Plasmodium vivax]
Length = 526
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 24 VVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
V+ DG+P++ GMN + D + Q L L +LK+ +LK GG F++K+FR + L+
Sbjct: 210 AVVSDGAPDITGMNDI-DEFIQSQLILSSLKVCCSVLKIGGNFISKIFRGEHTGLLILHL 268
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F+RV+ KPQ+SR +S E F+VC ++ P
Sbjct: 269 NKFFERVYVCKPQSSRNKSLESFLVCLNFSLP 300
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 22/64 (34%)
Query: 189 GYRSRAAFKLIQLNRKFEFL-----------QKSKV--------C---VDLCAAPGGWMQ 226
GYR+R++FKLIQ+N KF +K K+ C VDLCAAPG W Q
Sbjct: 20 GYRARSSFKLIQINEKFGIFKLFDPQRCGEKEKDKIGSIYNENFCYNVVDLCAAPGSWSQ 79
Query: 227 VAKQ 230
V K
Sbjct: 80 VLKN 83
>gi|150950985|ref|XP_001387267.2| tRNA methyltransferase [Scheffersomyces stipitis CBS 6054]
gi|149388260|gb|EAZ63244.2| tRNA methyltransferase [Scheffersomyces stipitis CBS 6054]
Length = 301
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + ILK G
Sbjct: 94 DITHPKTLHKILDIFGGEPADFVCSDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D L LF++V KP++SR S E F+VC Y
Sbjct: 154 GTFVAKIFRGRDIDLLYSQLSYLFEKVICAKPRSSRGTSLEAFIVCIGY 202
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 11/77 (14%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV------AKQNMMASSIIHFD 241
+G+R+R+AFKL+QL+ +F+ L K VDLCAAPG W QV KQN + I+ D
Sbjct: 19 QGWRARSAFKLLQLHDEFQILHGLKRVVDLCAAPGSWSQVLSRELYQKQNQPDAKIVAVD 78
Query: 242 DESVLKHPSTTVEIQEC 258
P T ++ C
Sbjct: 79 -----LQPMTPIDGVTC 90
>gi|298711156|emb|CBJ32381.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 405
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ K AI + ++V+ DG+P+V D Y Q L L AL + + +L G
Sbjct: 200 DITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPG 259
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR +D + L + LF+RV KP++SR S E FVVC+ Y P +
Sbjct: 260 GTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASML 319
Query: 123 DP 124
P
Sbjct: 320 TP 321
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
G+R+R+AFKL+QL+ +F + VDLCAAPG W QV ++
Sbjct: 20 GFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLG 65
>gi|452848344|gb|EME50276.1| hypothetical protein DOTSEDRAFT_165386 [Dothistroma septosporum
NZE10]
Length = 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 64/117 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 170 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGRFVAKIFRGKDVDLLYAQ 229
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKL 138
K +F+RV KP++SR S E F+VC ++ PA +P ++L A+ +L
Sbjct: 230 LKVVFERVTVAKPRSSRASSVEAFIVCTNFRPPAGFRASLDNPLGTTRQLEADKERL 286
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRILI 64
>gi|281208196|gb|EFA82374.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 274
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ DG+P+V D Y Q L L A + + +L GG FV K+F+ D T +
Sbjct: 114 DLVVSDGAPDVTGLHDIDFYGQAQLILSAFNITTHVLCRGGTFVAKMFKGNDMTLMYNQM 173
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F++CQ+Y P DP
Sbjct: 174 KLFFEKVSFVKPKSSRDSSLENFILCQNYQPPTDFTPTMIDP 215
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+R+R+AFKL+Q++ K VDLCAAPG W QV
Sbjct: 20 GWRARSAFKLLQIDDDHNIFGGVKRVVDLCAAPGSWSQV 58
>gi|300708035|ref|XP_002996206.1| hypothetical protein NCER_100740 [Nosema ceranae BRL01]
gi|239605486|gb|EEQ82535.1| hypothetical protein NCER_100740 [Nosema ceranae BRL01]
Length = 171
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
KGYR+R+AFKL+QLN+K+ FL+ +K+ +DLCAAPGGW+QVA Q M
Sbjct: 22 KGYRARSAFKLLQLNKKYGFLKDAKILIDLCAAPGGWLQVAAQEM 66
Score = 50.8 bits (120), Expect = 0.002, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 3 DITTDKCR---IAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DIT+D+CR + + + + DV+LHDG+PNVG +W DA++Q L +L+L+S
Sbjct: 92 DITSDECRKRLYGMLSDTEFRQADVILHDGAPNVGTSWENDAFNQNLLVFYSLQLSSPFF 151
Query: 60 KEGGWFVTKVF 70
+ K F
Sbjct: 152 ARRRYICNKDF 162
>gi|194899566|ref|XP_001979330.1| GG14838 [Drosophila erecta]
gi|190651033|gb|EDV48288.1| GG14838 [Drosophila erecta]
Length = 321
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DI+ + AI K +V+ DG+P+ GM+ +D+Y Q L L AL +++ IL+E
Sbjct: 97 DISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH-DFDSYVQGELLLSALSISTFILEE 155
Query: 62 GGWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV+K++RS D TS L+I K+ F+ V KP ASR S E FVV + + P
Sbjct: 156 GGSFVSKIYRS-DRTSRLYIQLKRFFKDVCVFKPSASRNSSIEAFVVARKFCLP 208
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q F+ L+ VDLCAAPG W QV + M
Sbjct: 19 QGWRARSAFKLLQAEETFQLLEGLTRAVDLCAAPGSWSQVLAKRM 63
>gi|298674755|ref|YP_003726505.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanohalobium
evestigatum Z-7303]
gi|298287743|gb|ADI73709.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanohalobium
evestigatum Z-7303]
Length = 255
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T+D+ I + ++ VDVV+ D +PN+ NW D L AL+ A +LK
Sbjct: 83 DMTSDRTVRKILKTIEDEGVDVVISDAAPNLSGNWNLDHARSIDLVESALEFAKQVLKPS 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF+ + L K F V + +P+ASR +SAEI+V+ ++ P K
Sbjct: 143 GNFVVKVFQGDMFNDFLEKVKNNFAYVKAHEPKASRSQSAEIYVIGMDFLNTPVK 197
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 35/42 (83%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+KL+Q+N +F ++K+ VDL AAPGGW+QVA++
Sbjct: 16 GYRSRAAYKLLQINNRFNVIEKNDTIVDLGAAPGGWLQVARK 57
>gi|134046035|ref|YP_001097521.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C5]
gi|189040313|sp|A4FYM2.1|RLME_METM5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|132663660|gb|ABO35306.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanococcus maripaludis
C5]
Length = 258
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%)
Query: 14 TRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSK 73
R+L K DV++ D SPN+ W D LT AL A+ +LK+GG FV KVF+
Sbjct: 106 ARDLLPEKPDVIICDASPNISGVWDVDHARSLELTTMALMTATKMLKKGGNFVVKVFQGD 165
Query: 74 DYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + + + F + +TKP+ASR ESAE++V+ + +
Sbjct: 166 LFEKYVQLVSEYFDKAFTTKPRASRDESAEVYVIGKRF 203
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
+ YRSRA +KL QLN KF +++ V VDL APGGW+Q A+
Sbjct: 24 RNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAAR 65
>gi|159904677|ref|YP_001548339.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C6]
gi|226703310|sp|A9A6B9.1|RLME_METM6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|159886170|gb|ABX01107.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C6]
Length = 258
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%)
Query: 14 TRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSK 73
R+L K DV++ D SPN+ W D LT AL A+ +LK GG FV KVF+
Sbjct: 106 ARDLLPEKPDVIICDASPNISGVWDVDHARSLELTTMALMTATKMLKRGGNFVVKVFQGD 165
Query: 74 DYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + + + F + +TKP+ASR ESAE++V+ + +
Sbjct: 166 LFEKYVQLVSEYFDKAFTTKPRASRDESAEVYVIGKRF 203
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
+ YRSRA +KL QLN KF +++ V VDL APGGW+Q A+
Sbjct: 24 RNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAAR 65
>gi|123977189|ref|XP_001330767.1| cell division protein [Trichomonas vaginalis G3]
gi|121912578|gb|EAY17398.1| cell division protein, putative [Trichomonas vaginalis G3]
Length = 244
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + K D+V+ DG+P+V D Y Q L A +A +L+EG
Sbjct: 90 DITSKETAQQVIDAMNGKKADLVISDGAPDVTGLHDLDEYMQSQLVFSAFNIACFMLREG 149
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+F +D L F+ V + KP+ASR S E FVVCQ + P
Sbjct: 150 GTFMAKIFTGRDIQDLYSSLSPFFETVTAMKPRASRVASLESFVVCQGFRLP 201
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM---ASSIIHFDDESV 245
G+R+R+AFKLIQ+ F VDLCAAPG W QV Q + S+I+ D + +
Sbjct: 19 GWRARSAFKLIQVADHFRLFDNVTRVVDLCAAPGSWSQVCAQKLSKVPNSAIVAVDLQPM 78
Query: 246 LKHPST 251
P
Sbjct: 79 APIPGV 84
>gi|440909767|gb|ELR59644.1| hypothetical protein M91_11689, partial [Bos grunniens mutus]
Length = 272
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 113 DITQLSTAKEIVQHFEDCPADLVVCDGAPDVTGLHDV-DEYMQSQLLLAALNIATHVLKP 171
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV K+FR +D T + + F V KP++SR S E F VC+ Y P
Sbjct: 172 GGCFVAKIFRGRDVTLVYSQLRVFFSSVLCAKPRSSRNTSIEAFAVCKGYDPP 224
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM---MASSIIHFDDES 244
G+R+ +AFKL+QL+ +F Q VDLCAAPGGW QV Q + + ++ D ++
Sbjct: 41 NGWRAHSAFKLLQLDEEFHLFQGVMRAVDLCAAPGGWTQVLSQKIGGQGSGHVVAVDLQA 100
Query: 245 VLKHPSTTVEIQ 256
+ P V+IQ
Sbjct: 101 MAPLPG-VVQIQ 111
>gi|21228390|ref|NP_634312.1| methyltransferase [Methanosarcina mazei Go1]
gi|74523704|sp|Q8PUP4.1|RLME_METMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|20906862|gb|AAM31984.1| methyltransferase [Methanosarcina mazei Go1]
Length = 268
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DI + I + + DVVL D +PN+ NW YD L AL+ A ILK
Sbjct: 84 DINAESTIKKIIKIVGEKGADVVLCDAAPNLSGNWSYDHARSIELATSALECAKKILKPK 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAKLDTKF 121
G F KVF+ + L + F RV + PQASR +SAEI+++ + ++ AP + KF
Sbjct: 144 GNFAVKVFQGDMFNDYLDEVRNNFVRVKAYSPQASRSQSAEIYIIGKKFLTAPLRKGDKF 203
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRA+FKL Q+N K +++ VDL AAPGGW+QVAKQ
Sbjct: 17 GYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQ 58
>gi|123446753|ref|XP_001312124.1| cell division protein [Trichomonas vaginalis G3]
gi|121893960|gb|EAX99194.1| cell division protein, putative [Trichomonas vaginalis G3]
Length = 244
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + + + K D+V+ DG+P+V D Y Q L A +A +L+EG
Sbjct: 90 DITSKETAQQVIDAMNGKKADLVISDGAPDVTGLHDLDEYMQSQLVFSAFNIACFMLREG 149
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G F+ K+F +D L F+ V + KP+ASR S E FVVCQ + P
Sbjct: 150 GTFMAKIFTGRDIQDLYSSLSPFFETVTAMKPRASRVASLESFVVCQGFKLP 201
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM---ASSIIHFDDESV 245
G+R+R+AFKLIQ+ F VDLCAAPG W QV Q + S+I+ D + +
Sbjct: 19 GWRARSAFKLIQVADHFRLFDNVTRVVDLCAAPGSWSQVCAQRLSKVPNSAIVAVDLQPM 78
Query: 246 LKHPST 251
P
Sbjct: 79 APIPGV 84
>gi|406604199|emb|CCH44285.1| putative ribosomal RNA methyltransferase [Wickerhamomyces ciferrii]
Length = 304
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L L AL+L + +L+ G
Sbjct: 99 DITHPKTLSKILEIFGGEPADFVCSDGAPDVTGLHDLDEYIQAQLILAALQLTTCLLRPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D + LF++V KP++SR S E F+VC Y
Sbjct: 159 GTFVAKIFRGRDIDLMYSQLGYLFEKVICAKPRSSRGTSLEAFIVCLGY 207
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDE 243
G+R+R+AFKL+QLN +F+ + + VDLCAAPG W QV + + + +DE
Sbjct: 20 GWRARSAFKLLQLNDQFQLFKGVRRVVDLCAAPGSWSQVLSRELFEKNQYTANDE 74
>gi|403217673|emb|CCK72166.1| hypothetical protein KNAG_0J00840 [Kazachstania naganishii CBS
8797]
Length = 311
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 57/119 (47%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I K D V DG+P+V D Y Q L + AL+L + +LK
Sbjct: 96 DITHPKTLSRILELFGNEKADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCVLKPH 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
G FV K+FR +D L LF+ V KP++SR S E F+VC Y PA K
Sbjct: 156 GNFVAKIFRGRDIDMLYSQLGYLFKSVVCAKPRSSRGTSLEAFIVCLDYQPPANWSPKL 214
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
GYR+R+AFKL+QLN +F FL + VDLCAAPG W QV + M
Sbjct: 20 GYRARSAFKLLQLNEEFHFLDDLERVVDLCAAPGSWSQVLSRKMF 64
>gi|67608071|ref|XP_666854.1| cell division protein [Cryptosporidium hominis TU502]
gi|54657922|gb|EAL36626.1| cell division protein [Cryptosporidium hominis]
Length = 275
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 3 DITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DIT+ R+ ++R L+ + K D+VL DGSP+V D Y Q L + +L + S I+
Sbjct: 110 DITS---RLTVSRILEYFQGKKADLVLCDGSPDVTGLHDIDEYIQNQLLISSLSITSKIM 166
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
++GG FV K+FR ++ + + F+ V KP++SR S E F+VC+++
Sbjct: 167 RKGGTFVAKIFRGENISRIYQQMFCYFELVDCCKPESSRNSSLEAFIVCRYF 218
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+A+KLIQ++ K+ K VDLCAAPG W QV ++ +S
Sbjct: 20 GFRARSAYKLIQIDEKYNIFDKVTRAVDLCAAPGSWSQVLSTKLLNNS 67
>gi|73670706|ref|YP_306721.1| 23S RNA methyltransferase J [Methanosarcina barkeri str. Fusaro]
gi|121722047|sp|Q466Q1.1|RLME_METBF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|72397868|gb|AAZ72141.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanosarcina barkeri
str. Fusaro]
Length = 263
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
+I D I + + DVVL D +PN+ NW YD L AL+ A ILK
Sbjct: 84 NINADSTIQKIIKTVGAKGADVVLCDAAPNLSGNWSYDHARSIELATSALECAKKILKPK 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAKLDTKF 121
G FV KVF+ + + + F R + P+ASR +SAEI+V+ + ++ AP + KF
Sbjct: 144 GNFVVKVFQGDMFNDYMQKVRDNFVRTMAYSPKASRSQSAEIYVIGKKFLTAPLRKGDKF 203
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRA+FKL Q+N + + + VDL AAPGGW+QVAK+
Sbjct: 17 GYRSRASFKLKQINERHHIINRGDSVVDLGAAPGGWLQVAKE 58
>gi|330926680|ref|XP_003301563.1| hypothetical protein PTT_13095 [Pyrenophora teres f. teres 0-1]
gi|311323564|gb|EFQ90356.1| hypothetical protein PTT_13095 [Pyrenophora teres f. teres 0-1]
Length = 386
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 59/113 (52%)
Query: 19 TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSL 78
T VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 165 TSPVDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLL 224
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+RV KP++SR S E FVVC+ + P P A +L
Sbjct: 225 FAQLKIVFERVRVAKPRSSRASSIEAFVVCEGFCPPKGFTASLDKPLGAGTQL 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
G+R+R+A+KL+QL+ +F VDLCAAPG W QV + ++ I
Sbjct: 20 GWRARSAYKLLQLDEEFNLFDGVTRVVDLCAAPGSWSQVLSRVLIKGEIF 69
>gi|195498417|ref|XP_002096514.1| GE25011 [Drosophila yakuba]
gi|194182615|gb|EDW96226.1| GE25011 [Drosophila yakuba]
Length = 318
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DI+ + AI K +V+ DG+P+ GM+ +D+Y Q L L AL +++ IL+E
Sbjct: 97 DISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH-DFDSYVQGELLLSALSISTFILEE 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV+K++R+ + L K+ F+ V KP ASR S E FVV Q + P
Sbjct: 156 GGSFVSKIYRADKTSRLYTQLKRFFKDVCVFKPSASRNSSIEAFVVAQKFCLP 208
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q F+ L VDLCAAPG W QV + M
Sbjct: 19 QGWRARSAFKLLQAEETFQLLDGLTRAVDLCAAPGSWSQVLAKRM 63
>gi|189201217|ref|XP_001936945.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984044|gb|EDU49532.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 306
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 58/110 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 86 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQ 145
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+RV KP++SR S E FVVC+ + P P A +L
Sbjct: 146 LKIVFERVRVAKPRSSRASSIEAFVVCEGFCPPKGFTASLDKPLGAGTQL 195
>gi|45358169|ref|NP_987726.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis S2]
gi|74555203|sp|Q6LZL8.1|RLME_METMP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|44920926|emb|CAF30162.1| 23 S ribosomal RNA methyltransferase related [Methanococcus
maripaludis S2]
Length = 258
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K DV++ D SPN+ W D LT AL A+ +LK+GG FV KVF+ + +
Sbjct: 113 KPDVIICDASPNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQ 172
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + F + +TKP+ASR ESAE++V+ + +
Sbjct: 173 LVSEYFDKAFTTKPRASRDESAEVYVIGKRF 203
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
+ YRSRA +KL QLN KF +++ V VDL APGGW+Q A+
Sbjct: 24 RNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAAR 65
>gi|340623858|ref|YP_004742311.1| ribosomal RNA large subunit methyltransferase E [Methanococcus
maripaludis X1]
gi|339904126|gb|AEK19568.1| ribosomal RNA large subunit methyltransferase E [Methanococcus
maripaludis X1]
Length = 258
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K DV++ D SPN+ W D LT AL A+ +LK+GG FV KVF+ + +
Sbjct: 113 KPDVIICDASPNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQ 172
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + F + +TKP+ASR ESAE++V+ + +
Sbjct: 173 LVSEYFDKAFTTKPRASRDESAEVYVIGKRF 203
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+ YRSRA +KL QLN KF +++ V VDL APGGW+Q A+ + + I+ D ++V
Sbjct: 24 RNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGDNGFIVGIDLQTVK 83
Query: 247 KHPSTTV 253
P V
Sbjct: 84 PLPHDNV 90
>gi|145477769|ref|XP_001424907.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391974|emb|CAK57509.1| unnamed protein product [Paramecium tetraurelia]
Length = 276
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I ++ + D+++ DG+P+V D Y Q L + AL + L+E
Sbjct: 113 DITKKTTVDEILKKFNYQRADIIVCDGAPDVTGFHDIDYYIQSQLIVAALNICLMTLREN 172
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+F+ D L FK F +V+ KP++SR S E F++C Y K+ T+ F
Sbjct: 173 GIFVAKIFKGSDIKLLYSQFKLFFNQVYFMKPKSSRASSVEYFIICLQY--TPKIQTQNF 230
Query: 123 DPKYAFKELGAEDGKLNALKKKQVEKSKALGY 154
KE+ + + + +Q EK ++ Y
Sbjct: 231 HLYTFLKEIEQAEKQKQEVIDQQTEKEQSKYY 262
>gi|451851185|gb|EMD64486.1| hypothetical protein COCSADRAFT_37069 [Cochliobolus sativus ND90Pr]
Length = 393
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 58/110 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 170 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQ 229
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+RV KP++SR S E FVVC+ + P P A +L
Sbjct: 230 LKIVFERVRVAKPRSSRASSIEAFVVCEGFCPPKGFTASLDKPLGAGTQL 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+A+KL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 20 GWRARSAYKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|401406446|ref|XP_003882672.1| KLLA0F18414p, related [Neospora caninum Liverpool]
gi|325117088|emb|CBZ52640.1| KLLA0F18414p, related [Neospora caninum Liverpool]
Length = 393
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT + AI D+V+ DG+P+V GM+ + D + Q L ALK+A +LK
Sbjct: 203 DITHESTVKAILDFFAQQPADLVICDGAPDVTGMHDI-DEFIQAQLLFAALKVACKVLKP 261
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
GG FV K FR + + K LF V KP ASR S E F+VC+ +
Sbjct: 262 GGVFVCKTFRGEQIPLVYLQLKTLFDAVRCCKPAASRNSSIEAFLVCRGF 311
>gi|219110463|ref|XP_002176983.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411518|gb|EEC51446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 315
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + + ++V+ DG+P+V G++ V D Y Q L L A+ + + +L E
Sbjct: 127 DITAQSTAQDIIKHFQGNRAELVVCDGAPDVTGLHDV-DEYLQGQLLLSAMMITTHVLCE 185
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR ++ L + LF+RV KP +SR S E FVVCQ +
Sbjct: 186 RGTFVAKIFRGRNVGFLYAQLRLLFERVSIAKPTSSRNSSMESFVVCQRF 235
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 15/55 (27%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ---------------KSKVCVDLCAAPGGWMQV 227
KGYR+R+AFKL+Q++ +F+ + + VDLCAAPG W QV
Sbjct: 19 KGYRARSAFKLLQVDAEFDIFGARGAPASLGNTIEPLRVQRAVDLCAAPGSWSQV 73
>gi|150403543|ref|YP_001330837.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C7]
gi|189040314|sp|A6VJR0.1|RLME_METM7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150034573|gb|ABR66686.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C7]
Length = 258
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K DV++ D SPN+ W D LT AL A+ +LK+GG FV KVF+ + +
Sbjct: 113 KPDVIICDASPNISGVWDVDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQ 172
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + F + +TKP+ASR ESAE++V+ + +
Sbjct: 173 LVSEYFDKAFTTKPRASRDESAEVYVIGKRF 203
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+ YRSRA +KL QLN KF +++ V VDL APGGW+Q A+ + I+ D ++V
Sbjct: 24 RNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGEKGFIVGIDLQTVK 83
Query: 247 KHPSTTV 253
P V
Sbjct: 84 PLPYENV 90
>gi|367006785|ref|XP_003688123.1| hypothetical protein TPHA_0M01140 [Tetrapisispora phaffii CBS 4417]
gi|357526430|emb|CCE65689.1| hypothetical protein TPHA_0M01140 [Tetrapisispora phaffii CBS 4417]
Length = 313
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I K V DG+P+V D Y Q L + AL+L + IL++G
Sbjct: 99 DITHPKTFNKILELFGNEKAQFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILEKG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKLD 118
G F+ K+FR +D L LF+++ KP++SR S E F+VC Y P KLD
Sbjct: 159 GVFIAKIFRGRDIDLLYSQLGFLFKKIICAKPRSSRGTSLEAFIVCLDYCPPKDWVPKLD 218
Query: 119 -----TKFFD 123
T+FF+
Sbjct: 219 LNKSVTEFFE 228
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV--CVDLCAAPGGWMQVAKQNMMA 234
+GYR+R+AFKL+QLN ++ FL + VDLCAAPG W QV + +
Sbjct: 19 QGYRARSAFKLLQLNEQYHFLDDPNLKRVVDLCAAPGSWSQVLSRKLFV 67
>gi|169618599|ref|XP_001802713.1| hypothetical protein SNOG_12491 [Phaeosphaeria nodorum SN15]
gi|160703646|gb|EAT80304.2| hypothetical protein SNOG_12491 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 58/110 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 163 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQ 222
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+RV KP++SR S E FVVC+ + P P A ++
Sbjct: 223 LKIVFERVRVAKPRSSRASSIEAFVVCEGFCPPPGFTASLDQPLGAGTQI 272
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+A+KL+QL+ +F VDLCAAPG W QV + ++
Sbjct: 20 GWRARSAYKLLQLDEEFNLFDGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|68472105|ref|XP_719848.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|68472340|ref|XP_719731.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|46441562|gb|EAL00858.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|46441688|gb|EAL00983.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|238881121|gb|EEQ44759.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida albicans WO-1]
Length = 293
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D V DG+P+V D Y Q L L AL+L + +LK GG FV K+FR +D L
Sbjct: 108 ADFVCSDGAPDVTGLHDLDEYIQSQLILSALQLTTCLLKPGGSFVAKIFRGRDIDLLYSQ 167
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
LF +V KP++SR S E F+VC Y
Sbjct: 168 LSYLFDKVICAKPRSSRGTSLEAFIVCLGY 197
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFDDESV-- 245
G+R+R+AFKL+QLN +F + VDLCAAPG W QV Q + S+I+ D + +
Sbjct: 20 GWRARSAFKLLQLNEEFNLFKDITRVVDLCAAPGSWSQVLSQKLGPDSTIVAVDLQPMTP 79
Query: 246 ----------LKHPSTTVEIQEC 258
+ HP T I++C
Sbjct: 80 IDGVTTIQADITHPKTLQRIRDC 102
>gi|261326415|emb|CBH09375.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 432
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
A TR + K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR
Sbjct: 211 APTRPVAGRKADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRRGGTFVTKMFR 270
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ L+ + F++V KP++SR S E F+VCQ+Y PA F P
Sbjct: 271 GPNTPFLVAKAEVFFRQVTIAKPKSSRNASMEAFMVCQNYDPPASYQPSFERP 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNMMAS 235
+GYR+R+A+KL+QL+ +F L++ ++ VDLCAAPG W QV ++ S
Sbjct: 19 EGYRARSAYKLLQLHEEFGILRREEIRTGVVDLCAAPGSWSQVLSNHLCGS 69
>gi|451996152|gb|EMD88619.1| hypothetical protein COCHEDRAFT_1068480, partial [Cochliobolus
heterostrophus C5]
Length = 387
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 58/110 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 170 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQ 229
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+RV KP++SR S E FVVC+ + P P A +L
Sbjct: 230 LKIVFERVRVAKPRSSRASSIEAFVVCEGFCPPKGFTASLDKPLGAGTQL 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+A+KL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 20 GWRARSAYKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|84043514|ref|XP_951547.1| ribosomal RNA methyltransferase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|33348376|gb|AAQ15702.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358698|gb|AAX79154.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei]
Length = 432
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
A TR + K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR
Sbjct: 211 ASTRPVAGRKADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRRGGTFVTKMFR 270
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ L+ + F++V KP++SR S E F+VCQ+Y PA F P
Sbjct: 271 GPNTPFLVAKAEVFFRQVTIAKPKSSRNASMEAFMVCQNYDPPASYQPSFERP 323
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNMMAS 235
+GYR+R+A+KL+QL+ +F L++ ++ VDLCAAPG W QV ++ S
Sbjct: 19 EGYRARSAYKLLQLHEEFGILRREEIRTGVVDLCAAPGSWSQVLSNHLCGS 69
>gi|330805936|ref|XP_003290932.1| ribosomal RNA methyltransferase [Dictyostelium purpureum]
gi|325078930|gb|EGC32556.1| ribosomal RNA methyltransferase [Dictyostelium purpureum]
Length = 253
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + I D+++ DG+P+V D Y Q L L AL + LK G
Sbjct: 94 DITKYETAKQIISHFDGSLADLIISDGAPDVTGLHDIDFYGQSQLILSALNIVVHTLKPG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+F+ D + + K F+ V KP++SR S E FV+C++Y P + K
Sbjct: 154 GTFVAKMFKGDDMSLMFSQMKLFFEHVSFVKPKSSRDSSLENFVLCKNYQPPENYNPKII 213
Query: 123 D 123
D
Sbjct: 214 D 214
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
G+R+R+AFKLIQ++ ++ + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLIQIDEEYSIFEDVKRVVDLCAAPGSWSQVLSRRIYG 65
>gi|241953819|ref|XP_002419631.1| 2'-O-ribose tRNA anticodon loop methyltransferase, putative; tRNA
(uridine-2'-O-)-methyltransferase, putative [Candida
dubliniensis CD36]
gi|223642971|emb|CAX43227.1| 2'-O-ribose tRNA anticodon loop methyltransferase, putative
[Candida dubliniensis CD36]
Length = 293
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D V DG+P+V D Y Q L L AL+L + +LK GG FV K+FR +D L
Sbjct: 108 ADFVCSDGAPDVTGLHDLDEYIQSQLILSALQLTTCLLKPGGSFVAKIFRGRDIDLLYSQ 167
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
LF +V KP++SR S E F+VC Y
Sbjct: 168 LSYLFDKVICAKPRSSRGTSLEAFIVCLGY 197
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD------ 242
G+R+R+AFKL+QLN +F+ + VDLCAAPG W QV Q + +S I D
Sbjct: 20 GWRARSAFKLLQLNEEFDLFEGITRVVDLCAAPGSWSQVLSQKLGPNSTIVAVDLQPMTP 79
Query: 243 -------ESVLKHPSTTVEIQEC 258
++ + HP T I++C
Sbjct: 80 IDGVTTIQADITHPKTLQRIRDC 102
>gi|255732766|ref|XP_002551306.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida tropicalis
MYA-3404]
gi|240131047|gb|EER30608.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida tropicalis
MYA-3404]
Length = 293
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D V DG+P+V D Y Q L L AL+L + +LK GG FV K+FR +D L
Sbjct: 108 ADFVCSDGAPDVTGLHDLDEYIQAQLVLSALQLTTCLLKPGGKFVAKIFRGRDIDLLYSQ 167
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
LF +V KP++SR S E F+VC Y
Sbjct: 168 LSYLFDKVICAKPRSSRGTSLEAFIVCLGY 197
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD------ 242
G+R+R+AFKL+QLN +F + VDLCAAPG W QV Q + +S I D
Sbjct: 20 GWRARSAFKLLQLNEEFNLFEDLTRVVDLCAAPGSWSQVLSQKLGPNSTIVAVDLQPMTP 79
Query: 243 -------ESVLKHPSTTVEIQEC 258
++ + HP T I +C
Sbjct: 80 IDGVTTIQADITHPRTLQRILDC 102
>gi|435850786|ref|YP_007312372.1| 23S rRNA methylase [Methanomethylovorans hollandica DSM 15978]
gi|433661416|gb|AGB48842.1| 23S rRNA methylase [Methanomethylovorans hollandica DSM 15978]
Length = 256
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+D I + VDVV+ D +PN+ NW YD L+ AL A ILK G
Sbjct: 84 DITSDATIKKIFELVGEGGVDVVICDAAPNLSGNWSYDHARSIDLSRSALGCAIKILKPG 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF+ + L + F S P ASR +SAEI+++ + ++ P K
Sbjct: 144 GHFVVKVFQGDMFKGFLEEARTDFVHTKSFSPVASRSQSAEIYIIAKKFLNVPVK 198
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAAFKL+Q+N KF +++ VDL AAPGGW +VAK+ + +I D
Sbjct: 17 GYRSRAAFKLLQINEKFSVIKEGDTVVDLGAAPGGWSEVAKK-LSGGRVIGVD 68
>gi|398399034|ref|XP_003852974.1| hypothetical protein MYCGRDRAFT_109098 [Zymoseptoria tritici
IPO323]
gi|339472856|gb|EGP87950.1| hypothetical protein MYCGRDRAFT_109098 [Zymoseptoria tritici
IPO323]
Length = 569
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 359 VDLVLSDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDILYAQ 418
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+ V +KP++SR S E F+VC ++ P DP A + +
Sbjct: 419 LKTVFEGVTVSKPRSSRASSVEAFIVCTNFRPPKGFTASLQDPMGATQPM 468
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++ +I
Sbjct: 216 QGWRARSAFKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRILIKGEMI 266
>gi|24648639|ref|NP_650947.1| CG7009 [Drosophila melanogaster]
gi|9910868|sp|Q9VDD9.1|RMJ1B_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG7009;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300710|gb|AAF55857.1| CG7009 [Drosophila melanogaster]
Length = 320
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DI+ + AI K +V+ DG+P+ GM+ +D+Y Q L L AL +++ IL+E
Sbjct: 97 DISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH-DFDSYVQGELLLSALSISTFILEE 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV+K++R+ + L K+ F+ V KP ASR S E FVV + + P
Sbjct: 156 GGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSIEAFVVAREFCLP 208
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F+ L+ VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRL 63
>gi|238501666|ref|XP_002382067.1| tRNA methyltransferase, putative [Aspergillus flavus NRRL3357]
gi|83766939|dbj|BAE57079.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692304|gb|EED48651.1| tRNA methyltransferase, putative [Aspergillus flavus NRRL3357]
gi|391863966|gb|EIT73265.1| SAM-dependent methyltransferase/cell division protein FtsJ
[Aspergillus oryzae 3.042]
Length = 427
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 174 VDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVLRPGGKFVAKIFRGRDVDLIYAQ 233
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ +F++V KP++SR S E FVVC+ +I P+
Sbjct: 234 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 267
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|15029842|gb|AAH11144.1| Ftsj1 protein [Mus musculus]
Length = 308
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I + + + +G+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAKEIIQHFEGCPALFAVCEGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKL 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T L + F V KP++SR S E F VCQ Y P L
Sbjct: 150 GGCFVAKIFRGRDVTLLYSQLRIFFPSVLCAKPKSSRNSSIEAFAVCQGYDPPEGFIPDL 209
Query: 118 DTKFFDPKYAFKEL 131
+ Y F +L
Sbjct: 210 TRPLLNHSYDFNQL 223
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ---NMMASSIIHFDDES 244
G+R+R+AFKL+QL+ +F L+ K V +CAAP + V Q + ++ D ++
Sbjct: 19 NGWRARSAFKLLQLDEEFSLLESVKRAVAVCAAPFFFFFVRLQKAGGHGSGQVVAVDLQA 78
Query: 245 VLKHPSTTVEIQ 256
+ P ++IQ
Sbjct: 79 MAPQPG-VIQIQ 89
>gi|317142766|ref|XP_001819081.2| transfer RNA methyltransferase [Aspergillus oryzae RIB40]
Length = 393
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 140 VDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVLRPGGKFVAKIFRGRDVDLIYAQ 199
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ +F++V KP++SR S E FVVC+ +I P+
Sbjct: 200 LRTVFEKVSVAKPRSSRASSLEAFVVCEGFIPPS 233
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQ-----KSKVCVDLCAAPGGWMQVAKQNMM 233
+ +R+R+AFKLIQ++ +F+ + K VDLCAAPG W QV + ++
Sbjct: 19 QNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|336122117|ref|YP_004576892.1| ribosomal RNA large subunit methyltransferase E
[Methanothermococcus okinawensis IH1]
gi|334856638|gb|AEH07114.1| Ribosomal RNA large subunit methyltransferase E
[Methanothermococcus okinawensis IH1]
Length = 288
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D V+ D SPN+ W D LT AL A+ +LK+ G FV KVF+ + +
Sbjct: 113 KADAVICDASPNISGVWERDHTRSLELTTIALITATKLLKKDGNFVVKVFQGSLFNDYVA 172
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
+ K F++V +TKP+ASR SAE++VV + ++
Sbjct: 173 LLKNYFKKVQTTKPKASRDVSAEVYVVGKKFLG 205
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
YRSRA++KL+QLN KF ++++ V VDL APGGW+Q A+
Sbjct: 26 YRSRASYKLLQLNEKFNIIKENDVVVDLGCAPGGWLQAAR 65
>gi|237832339|ref|XP_002365467.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii ME49]
gi|211963131|gb|EEA98326.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii ME49]
Length = 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT + AI D+V+ DG+P+V GM+ + D + Q L AL++A +LK
Sbjct: 204 DITHESTVKAILDFFAQQPADLVVCDGAPDVTGMHDI-DEFIQAQLLFAALRVACKVLKP 262
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY-IAPAKLDT 119
GG FV K FR + + K LF V KP ASR S E F+VC+ + P LD
Sbjct: 263 GGVFVCKAFRGEQIPLVYVQLKTLFAEVRCCKPAASRNSSIEAFLVCKGFEPLPVGLDA 321
>gi|403357673|gb|EJY78465.1| Putative ribosomal RNA methyltransferase 1 [Oxytricha trifallax]
Length = 319
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT +K I + +V+ DG+P++ + +D + Q L L AL +A +L G
Sbjct: 96 DITREKTVQEIQEVFEGEPSQLVVSDGAPDILGDHDFDQFVQHQLVLAALNIAIRLLSPG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
G FV KVFR KD L K +F V+ +KP+ SR S E FVV ++++
Sbjct: 156 GTFVAKVFRGKDINLLHRQIKMVFSDVYCSKPKCSRNSSIEGFVVAKNFLG 206
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+Q++ +F + VDLCAAPG W QV + +
Sbjct: 20 GYRARSAYKLLQIDEEFNIFEGVDRVVDLCAAPGSWSQVISKRL 63
>gi|115400479|ref|XP_001215828.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Aspergillus terreus
NIH2624]
gi|114191494|gb|EAU33194.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Aspergillus terreus
NIH2624]
Length = 474
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
VD+V+ DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 73 PVDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVLRPGGKFVAKIFRGRDVDIIYA 132
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+ +F++V KP++SR S E FVVC+ +I PA D
Sbjct: 133 QLRTVFEKVSVAKPRSSRASSLESFVVCEGFIPPAIHD 170
>gi|226469920|emb|CAX70241.1| FtsJ homolog 1 [Schistosoma japonicum]
Length = 345
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + +V+ DG+P+V D Y Q L L AL + S +L+ G
Sbjct: 102 DITSQDTAQQIIKHFSGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELG 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQ-RVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR +D L + LF +V KP+ASR S E FVVC+ ++ P
Sbjct: 162 GTFVAKVFRGRDSGLLGSQLRCLFSGQVSFAKPKASRNSSLESFVVCRGFMGP 214
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMMAS 235
G+R+R+A+KL+Q++ ++ L ++ VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGSWSQVLSKRLWES 71
>gi|21430814|gb|AAM51085.1| SD16956p [Drosophila melanogaster]
Length = 324
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DI+ + AI K +V+ DG+P+ GM+ +D+Y Q L L AL +++ IL+E
Sbjct: 97 DISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH-DFDSYVQGELLLSALSISTFILEE 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV+K++R+ + L K+ F+ V KP ASR S E FVV + + P
Sbjct: 156 GGSFVSKIYRADRTSRLYTQLKRFFKDVCVFKPSASRNSSIEAFVVAREFCLP 208
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F+ L+ VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRL 63
>gi|297618952|ref|YP_003707057.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus voltae A3]
gi|297377929|gb|ADI36084.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus voltae A3]
Length = 298
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASG--ILKEGGWFVTKVFRSKDYTSLLW 80
DV++ D SPNV W D H C L L + L + +LK GG FV KVF+ +
Sbjct: 115 DVIICDASPNVSGVW--DVDHTCSLILTTMALMTSTRVLKRGGNFVVKVFQGDLFNKYTD 172
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ F +V +TKP+ASR ESAE++V+ + +
Sbjct: 173 LVGTYFDKVITTKPKASRGESAEVYVIGRRF 203
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
YRSRA +KL QLN KF F+++ V +DL APGGW+Q A++
Sbjct: 26 YRSRATYKLFQLNEKFNFIKEDNVVIDLGCAPGGWLQSARE 66
>gi|239790974|dbj|BAH72013.1| ACYPI009233 [Acyrthosiphon pisum]
Length = 307
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L L AL + + +LK GG F+ K+FR KD + L+
Sbjct: 115 VDLVVFDGAPDVTGLHDLDEYVQAQLLLAALNITTYLLKPGGTFIGKIFRGKDSSLLISQ 174
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F V KP +SR S E FVVC+ + P
Sbjct: 175 LEIFFGDVVVAKPCSSRNSSIESFVVCRDFRLP 207
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKLIQ+N +F+ L K VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLIQINSQFKVLDGVKRVVDLCAAPGSWSQVLSKAL 63
>gi|145484697|ref|XP_001428358.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395443|emb|CAK60960.1| unnamed protein product [Paramecium tetraurelia]
Length = 282
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I ++ + D+++ DG+P+V D Y Q L + AL + L+E
Sbjct: 118 DITKKTTVDEILKKFNYQRADIIVCDGAPDVTGFHDIDYYIQSQLIVAALNICLMTLREN 177
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+F+ D L FK F +V+ KP++SR S E F++C Y
Sbjct: 178 GIFVAKIFKGSDIKLLYSQFKLFFNQVYFMKPKSSRASSVEYFIICLQY 226
>gi|195355564|ref|XP_002044261.1| GM15097 [Drosophila sechellia]
gi|194129562|gb|EDW51605.1| GM15097 [Drosophila sechellia]
Length = 321
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DI+ + AI K +V+ DG+P+ GM+ +D+Y Q L L AL +++ IL+E
Sbjct: 97 DISKESTAEAIIEFFGGEKAQIVVSDGAPDSTGMH-DFDSYVQGELLLSALSISTFILEE 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV+K++R+ + L K+ F+ V KP ASR S E FVV + + P
Sbjct: 156 GGSFVSKIYRADRTSRLYTQLKRFFKDVCVFKPSASRNSSIEAFVVARKFCLP 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F+ L+ VDLCAAPG W QV + M
Sbjct: 19 QGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRM 63
>gi|448521064|ref|XP_003868416.1| Trm7 protein [Candida orthopsilosis Co 90-125]
gi|380352756|emb|CCG25512.1| Trm7 protein [Candida orthopsilosis]
Length = 299
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D V DG+P+V D Y Q L A +L + ILK GG FV K+FR +D + +
Sbjct: 115 ADFVCSDGAPDVTGLHDLDEYVQHQLVWAAFQLTTCILKPGGSFVAKIFRGRDIDLMYYQ 174
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ F +V+ KP++SR S E F+VC Y
Sbjct: 175 LSKFFTKVYCAKPRSSRGTSLEAFIVCLGY 204
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 15/88 (17%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
GYR+R+A+KL+QL+++F L VDLCAAPG W QV + ++ I+ D + +
Sbjct: 20 GYRARSAYKLLQLDQQFNLLSNITRVVDLCAAPGSWSQVLSHKLGSNPDARIVAVDLQPM 79
Query: 246 ------------LKHPSTTVEIQECCKD 261
+ HP T +I +C KD
Sbjct: 80 TPIDHVTTLQADITHPKTLQQILDCFKD 107
>gi|66358984|ref|XP_626670.1| ybr061c-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
gi|46228392|gb|EAK89291.1| ybr061c-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
Length = 296
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 3 DITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DIT+ ++ ++R L+ + K D+VL DGSP+V D Y Q L + +L + S I+
Sbjct: 131 DITS---QLTVSRILEYFQGKKADLVLCDGSPDVTGLHDIDEYIQNQLLVSSLSITSKIM 187
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
++GG FV K+FR ++ + + F+ V KP++SR S E F+VC+++
Sbjct: 188 RKGGTFVAKIFRGENISRIYQQMFCYFELVDCCKPESSRNSSLEAFIVCRYF 239
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+A+KLIQ++ K+ K VDLCAAPG W QV ++ +S
Sbjct: 41 GFRARSAYKLIQIDEKYNIFDKVTRAVDLCAAPGSWSQVLSTKLLNNS 88
>gi|224011377|ref|XP_002295463.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583494|gb|ACI64180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 221
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ + I + + ++V+ DG+P+V +D+Y Q L L A+ +++ +L
Sbjct: 111 DITSLETAQKIIQHFHGRRAELVVCDGAPDVTNLHSFDSYTQSQLLLSAINISTHVLSPN 170
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR +D + + LF+ V KP ASR S E FVVC+ +
Sbjct: 171 GIFVAKIFRGRDVGLIYTQLQLLFENVVCAKPTASRNASIESFVVCRGF 219
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
GYR+R+AFKLIQ++ +F+ L V DLCAAPGGW QV
Sbjct: 20 GYRARSAFKLIQIDNEFDLLVHRAV--DLCAAPGGWSQV 56
>gi|453089645|gb|EMF17685.1| uridine-2'-O--methyltransferase TRM7 [Mycosphaerella populorum
SO2202]
Length = 377
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR+KD L
Sbjct: 166 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGRFVAKIFRAKDVDVLYAQ 225
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K +F+ V+ KP++SR S E F+VC ++ P DP
Sbjct: 226 LKTVFESVNVAKPRSSRASSVEAFIVCTNFRPPPGFRASLDDP 268
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFSGVSRVVDLCAAPGSWSQVLSRILI 64
>gi|390479762|ref|XP_002762910.2| PREDICTED: putative ribosomal RNA methyltransferase 1 [Callithrix
jacchus]
Length = 220
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 29 GSPN-------VGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
G PN G++ V D Y Q L L AL +A+ +LK GG FV K+FR +D T L
Sbjct: 2 GPPNAVPLAIVTGLHDV-DEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQ 60
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F V KP++SR S E F VCQ Y P
Sbjct: 61 LRVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 93
>gi|307109488|gb|EFN57726.1| hypothetical protein CHLNCDRAFT_142970 [Chlorella variabilis]
Length = 325
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++ + D+V+ DG+P+V D + Q L L AL + + +L G
Sbjct: 100 DITSEATARQVISHFHGHHADLVVCDGAPDVTGLHDMDEFVQGQLILAALAIVAHVLVPG 159
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
G V KVFR +D L K F V KP++SR S E FVVC+ Y P +
Sbjct: 160 GTLVAKVFRGRDIALLYSQLKIFFPDVTVAKPKSSRNSSIEAFVVCRRYAPPPGFE 215
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSI 237
G+R+R+AFKL+Q++ F + VDLCAAPG W QV + + ++
Sbjct: 20 GWRARSAFKLLQIDDAFHIFAGVRHVVDLCAAPGSWSQVLSRRLYLPAV 68
>gi|327348578|gb|EGE77435.1| tRNA (Uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis ATCC 18188]
Length = 396
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA G+L+ GG FV K+FR +D +
Sbjct: 200 VDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYAQ 259
Query: 82 FKQLFQRVHSTKPQASRKESAEIFV 106
K +F++V KP++SR S E FV
Sbjct: 260 LKTVFEKVSVAKPRSSRASSLEAFV 284
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKV-----CVDLCAAPGGWMQVAKQNMM 233
+R+R+AFKLIQ++ +F+ S VDLCAAPG W QV + ++
Sbjct: 21 WRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAPGSWSQVLSRVLI 69
>gi|396475411|ref|XP_003839780.1| similar to tRNA (uridine-2'-O-)-methyltransferase TRM7
[Leptosphaeria maculans JN3]
gi|312216350|emb|CBX96301.1| similar to tRNA (uridine-2'-O-)-methyltransferase TRM7
[Leptosphaeria maculans JN3]
Length = 388
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 168 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQ 227
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F RV KP++SR S E FVVC+ + P
Sbjct: 228 LKTVFDRVRVAKPRSSRASSIEAFVVCEGFCPP 260
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+A+KL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 20 GWRARSAYKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|150401023|ref|YP_001324789.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus aeolicus
Nankai-3]
gi|189040311|sp|A6UUK5.1|RLME_META3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150013726|gb|ABR56177.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus aeolicus
Nankai-3]
Length = 269
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%)
Query: 16 ELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
+L K DVV+ D SPN+ W D L+L AL + +L++ G FV KVF+ +
Sbjct: 108 DLMPSKADVVICDASPNISGVWEVDHSRSIELSLMALIATTHLLRKNGNFVVKVFQGSLF 167
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
+ + + F++V +TKP+ASR SAE++V+ + ++
Sbjct: 168 DQYVQLLTKYFKKVQTTKPKASRSVSAEVYVIGKKFLG 205
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
YRSRA++KL+QLN KFE + + VDL APGGW+Q +
Sbjct: 26 YRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQAS 64
>gi|328711007|ref|XP_003244421.1| PREDICTED: putative ribosomal RNA methyltransferase C4F10.03c-like
[Acyrthosiphon pisum]
Length = 307
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L L AL + + +LK GG F+ K+FR KD + L+
Sbjct: 115 VDLVVFDGAPDVTGLHDLDEYVQAQLLLAALNITTYLLKPGGTFIGKIFRGKDSSLLISQ 174
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F V KP +SR S E FVVC+ + P
Sbjct: 175 LEIFFGDVVVAKPCSSRNSSIESFVVCRDFWLP 207
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKLIQ+N +F+ L K VDLCAAPG W QV + +
Sbjct: 19 QGWRARSAFKLIQINSQFKVLDGVKRVVDLCAAPGSWSQVLSKAL 63
>gi|156102665|ref|XP_001617025.1| ribosomal RNA large subunit methyltransferase J [Plasmodium vivax
Sal-1]
gi|148805899|gb|EDL47298.1| ribosomal RNA large subunit methyltransferase J, putative
[Plasmodium vivax]
Length = 266
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 17 LKTWKVDVVLHDGS-PNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
L+ KVD++L D + P VG N + D + C LTLG + GG +V K++
Sbjct: 149 LQGKKVDIILSDAAVPCVG-NKIDDHMNSCELTLGITNFMEQYINMGGTYVVKMYLGSQT 207
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+L K +FQ V++TKP+ASR+ES EI++VC++++ K+
Sbjct: 208 DNLKTYLKTIFQFVNTTKPKASRRESREIYLVCRNFLGRKKI 249
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAA+KLI+L+ K+ FL+K+K +D+ PG W QV
Sbjct: 58 YRSRAAYKLIELDNKYMFLKKNKTILDIGCYPGSWCQV 95
>gi|449015651|dbj|BAM79053.1| probable tRNA methyltransferase Trm7 [Cyanidioschyzon merolae
strain 10D]
Length = 249
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + L + D+VL DG+P+V D Y QC L AL+ +L EG
Sbjct: 94 DITQEDTLERVRCALGGRRADLVLSDGAPDVTGLHDLDEYVQCELVQAALRFCVAMLAEG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+FR + L + F+ ++ KP++SR S E F+VC+ +
Sbjct: 154 GKFVAKIFRGYESALLYARIRPYFRELYIAKPRSSRNSSLESFIVCRGF 202
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+QL+ +F + DLCAAPG W QV Q +
Sbjct: 18 EGFRARSAFKLLQLDDEFGIFTGVRTVADLCAAPGSWSQVVSQKL 62
>gi|407044201|gb|EKE42437.1| ribosomal RNA large subunit methyltransferase J protein [Entamoeba
nuttalli P19]
Length = 231
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + K D+++ DG+P+V D +Q L A + + +LK+G
Sbjct: 85 DITKGSTAKEVMSHFTNGKADLIICDGAPDVTGIHDIDEANQWILMQAAFSIMAVVLKQG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+F +Y L + FK +F+ V KP++SR S E FVVC+ +
Sbjct: 145 GSFVAKIFVENEYPHLYFQFKSVFESVTIYKPESSRSSSYEHFVVCKGF 193
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+AFKLI + R F VDLCAAPG W QV + +
Sbjct: 16 GYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTI 59
>gi|194764569|ref|XP_001964401.1| GF23069 [Drosophila ananassae]
gi|190614673|gb|EDV30197.1| GF23069 [Drosophila ananassae]
Length = 405
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDI+ + AI + K +V+ DG+P+ +D+Y Q L + A+ +A+ IL+E
Sbjct: 96 EDISKESTAEAIINFFEGEKAQIVVCDGAPDSTGMHDFDSYVQIELVITAISIATYILEE 155
Query: 62 GGWFVTKVFR----SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG FV+K++R SK YT + K+ F+ V KP ASR S E FV+ + + P
Sbjct: 156 GGSFVSKIYRCDKTSKAYTQM----KRFFKDVCVFKPSASRNSSIEAFVIGRQFCLP 208
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q + F L VDLCAAPG W QV ++M
Sbjct: 19 QGWRARSAFKLLQADETFHLLDGLHRAVDLCAAPGSWSQVLAKHM 63
>gi|407919560|gb|EKG12790.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Macrophomina phaseolina
MS6]
Length = 382
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR KD L
Sbjct: 163 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLYAQ 222
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K +F RV KP++SR S E FVVC+ + P +P
Sbjct: 223 LKTVFDRVRVAKPRSSRASSIEAFVVCEGFRPPEGFKASLDNP 265
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRILI 64
>gi|116754447|ref|YP_843565.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosaeta thermophila
PT]
gi|121694084|sp|A0B8A1.1|RLME_METTP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116665898|gb|ABK14925.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanosaeta thermophila
PT]
Length = 255
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT ++ I L + DVV+ D +PN+ W D L+ AL++A +L+ G
Sbjct: 84 DITKEETLEQIAAALGG-QADVVISDAAPNLSGIWDVDHARSIDLSRAALRIAKRLLRPG 142
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G F+ KVF+ + L K+ F VH+ P ASRKESAEI+V+ + ++ + +
Sbjct: 143 GSFLVKVFQGDMFNDYLEEVKREFSSVHAYTPPASRKESAEIYVIGKKLLSAPVRSGEIY 202
Query: 123 D 123
D
Sbjct: 203 D 203
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV 245
GYR+R+A+KL Q+N KF +++ VDL AAPGGW+QVA++ + ++ D E +
Sbjct: 17 GYRARSAYKLKQINDKFHIIRRGSRVVDLGAAPGGWLQVARE-LSGGIVVGVDLERI 72
>gi|356549337|ref|XP_003543050.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Glycine
max]
Length = 313
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + + R K D+V+ DG+P+V D + Q L L L + + +LKEG
Sbjct: 101 DITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILPGLTIVTHVLKEG 160
Query: 63 GWFVTKVFRSKDYTSLLWI-FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
G + FR KD TSLL+ K F V KP++SR S E F VC++Y P + K
Sbjct: 161 GKLI---FRGKD-TSLLYCQLKLFFPVVTFAKPKSSRNSSIEAFAVCENYSPPEGFNPK 215
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q++ +F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQIDEEFNLFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|389586034|dbj|GAB68763.1| ribosomal RNA large subunit methyltransferase J, partial
[Plasmodium cynomolgi strain B]
Length = 266
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 17 LKTWKVDVVLHDGS-PNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
L+ KVD++L D + P VG N + D + C LTLG + GG +V K++
Sbjct: 149 LQGKKVDIILSDAAVPCVG-NKIDDHLNSCELTLGITNFMEQYINMGGTYVVKMYLGSQT 207
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+L K +FQ V++TKP+ASR+ES E+++VC++++ K+
Sbjct: 208 DNLKTYLKTIFQFVNTTKPKASRRESREVYLVCRNFLGRKKI 249
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAA+KLI+L+ K+ FL+K+K +D+ PG W QV
Sbjct: 58 YRSRAAYKLIELDNKYMFLKKNKTILDIGCYPGSWCQV 95
>gi|167378804|ref|XP_001734938.1| ribosomal RNA methyltransferase [Entamoeba dispar SAW760]
gi|165903298|gb|EDR28886.1| ribosomal RNA methyltransferase, putative [Entamoeba dispar SAW760]
Length = 231
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + K D+++ DG+P+V D +Q L A + + +LK+G
Sbjct: 85 DITKGSTAKEVMSHFTDGKADLIICDGAPDVTGIHDIDEANQWILMQAAFSIMAVVLKQG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+F +Y L + FK +F+ V KP++SR S E FVVC+ +
Sbjct: 145 GSFVAKIFVENEYPHLYFQFKSVFESVTIYKPESSRSSSYEHFVVCKGF 193
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+AFKLI + R F VDLCAAPG W QV + +
Sbjct: 16 GYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTI 59
>gi|221060839|ref|XP_002261989.1| ribosomal RNA methyltransferase [Plasmodium knowlesi strain H]
gi|193811139|emb|CAQ41867.1| ribosomal RNA methyltransferase, putative [Plasmodium knowlesi
strain H]
Length = 266
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 17 LKTWKVDVVLHDGS-PNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
L+ KVD++L D + P VG N + D + C LTLG + GG +V K++
Sbjct: 149 LQGKKVDIILSDAAVPCVG-NKIDDHLNSCELTLGITNFMEQYINMGGTYVVKMYLGSQT 207
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+L K +FQ V++TKP+ASR+ES E+++VC++++ K+
Sbjct: 208 DNLKTYLKTIFQFVNTTKPKASRRESREVYLVCRNFLGRKKI 249
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAA+KLI+L+ K+ FL+K+K+ +D+ PG W QV
Sbjct: 58 YRSRAAYKLIELDNKYMFLKKNKIILDIGCYPGSWCQV 95
>gi|391336629|ref|XP_003742681.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Metaseiulus occidentalis]
Length = 313
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I ++ + K D+V+ DG+P+V D Y Q L + AL + + +LK
Sbjct: 96 DITKLATAQQIVQQFEGEKADLVVCDGAPDVTGFHDMDEYIQGQLLIAALNITTHVLKPH 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKLD 118
G V K+FR +D L + F+RV KP +SR S E F VC Y P ++
Sbjct: 156 GNMVAKIFRGRDVALLTSKLELFFKRVVIAKPSSSRNSSIEAFAVCLDYCPPDDYVPHMN 215
Query: 119 TKFFDPKYAFKELGAE 134
D + F E E
Sbjct: 216 NPLLDGHWDFLETMPE 231
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+Q+N F + K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLQINEHFNIFEGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|358060101|dbj|GAA94160.1| hypothetical protein E5Q_00808 [Mixia osmundae IAM 14324]
Length = 312
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 57/113 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I K K +V+ DG+P+V D + Q L L AL + L+
Sbjct: 113 DITKLATAQRIIEYFKGEKAQLVVCDGAPDVTGLHDLDEFMQSRLLLAALNITLHTLEPR 172
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G F+ K+FR KD T L + LF +V KP++SR S E FVVCQ + PA
Sbjct: 173 GTFIAKIFRGKDVTLLFDQLECLFGKVDCAKPRSSRDSSIEAFVVCQDFRPPA 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
GYR+R+A+KL+ L+ +F+ + C+DLCAAPG W QV ++
Sbjct: 40 GYRARSAYKLLHLDEEFDLFRGVTRCIDLCAAPGSWSQVLSDALI 84
>gi|67473519|ref|XP_652522.1| ribosomal RNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56469380|gb|EAL47134.1| ribosomal RNA methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704737|gb|EMD44923.1| ribosomal RNA methyltransferase [Entamoeba histolytica KU27]
Length = 231
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + K D+++ DG+P+V D +Q L A + + +LK+G
Sbjct: 85 DITKGSTAKEVMSHFTDGKADLIICDGAPDVTGIHDIDEANQWILMQAAFSIMAVVLKQG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+F +Y L + FK +F+ V KP++SR S E FVVC+ +
Sbjct: 145 GSFVAKIFVENEYPHLYFQFKSVFESVTIYKPESSRSSSYEHFVVCKGF 193
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+AFKLI + R F VDLCAAPG W QV + +
Sbjct: 16 GYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTI 59
>gi|76154918|gb|AAX26315.2| SJCHGC03585 protein [Schistosoma japonicum]
Length = 218
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + +V+ DG+P+V D Y Q L L AL + S +L+ G
Sbjct: 102 DITSQDTAQQIIKHFSGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELG 161
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQ-RVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR +D L + LF +V KP+ASR S E FVVC+ ++ P
Sbjct: 162 GTFVAKVFRGRDSGLLGSQLRCLFSGQVSFAKPKASRNSSLESFVVCRGFMGP 214
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSK-----VCVDLCAAPGGWMQVAKQNM 232
G+R+R+A+KL+Q++ ++ L ++ VDLCAAPG W QV + +
Sbjct: 20 GWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGSWSQVLSKRL 68
>gi|354545501|emb|CCE42229.1| hypothetical protein CPAR2_807780 [Candida parapsilosis]
Length = 303
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D V DG+P+V D Y Q L A +L + ILK GG FV K+FR KD +
Sbjct: 120 DFVCSDGAPDVTGMHDLDEYVQHQLVWAAFQLTTCILKPGGSFVAKIFRGKDIDLMYKQL 179
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ F +V+ KP++SR S E F+VC Y
Sbjct: 180 SKFFTKVYCAKPRSSRGTSLEAFIVCLGY 208
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
GYR+R+A+KL+QL+++F L VDLCAAPG W QV + ++ I+ D + +
Sbjct: 20 GYRARSAYKLLQLDQQFHLLNNITRVVDLCAAPGSWSQVLSHKLGSNPDARIVAVDLQPM 79
Query: 246 ------------LKHPSTTVEIQEC 258
+ HP T +I +C
Sbjct: 80 TPIDHVTTLQADITHPKTLQQIMDC 104
>gi|328771243|gb|EGF81283.1| hypothetical protein BATDEDRAFT_10491 [Batrachochytrium
dendrobatidis JAM81]
Length = 283
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT IT K D+V+ DG+P+V D Y Q L L A + S +L+ G
Sbjct: 94 DITKKSTAELITSHFDGEKADLVICDGAPDVTGLHDMDEYIQAQLLLAAFNITSHVLRNG 153
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G F+ K+FR KD + L + F V KP+ S F+VC++Y PA
Sbjct: 154 GTFIAKIFRGKDISLLFAQMRLFFPLVDVAKPRKS-------FIVCRNYSPPA 199
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA------SSIIHFD 241
+G+R+R+AFKL+Q++ ++ + K VDLCAAPG W QV + + + S I+ D
Sbjct: 19 QGWRARSAFKLLQIDEEYNIFEDVKNVVDLCAAPGSWSQVLSRRLASTDSTKQSKIVAVD 78
Query: 242 DESVLKHPSTTVEIQ 256
+++ P ++IQ
Sbjct: 79 LQAMAPLPG-VIQIQ 92
>gi|340052350|emb|CCC46628.1| putative ribosomal RNA methyltransferase [Trypanosoma vivax Y486]
Length = 398
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
+ L K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR +
Sbjct: 182 QPLSERKADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRHGGTFVTKIFRGPN 241
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAF 128
L+ + F+ V KP++SR S E F+VCQ Y PA F P F
Sbjct: 242 TPFLVAKAEVFFRHVAVAKPRSSRNASMEAFMVCQDYQPPASYRPSFKSPLTDF 295
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNMMASSIIHFDDESV 245
GYR+R+A+KL+QL+ +F L++ ++ VDLCAAPG W QV ++ + D++
Sbjct: 20 GYRARSAYKLLQLHEEFGILRRDRILTGVVDLCAAPGSWSQVLSAHLQGGASDECGDKAS 79
Query: 246 LKHPSTTVEIQE 257
+ V++QE
Sbjct: 80 QRPRIVAVDLQE 91
>gi|348669518|gb|EGZ09341.1| hypothetical protein PHYSODRAFT_339689 [Phytophthora sojae]
Length = 252
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
L+ K DVVL D +P+ N++ D+ HQ L ALK+A L+ GG F TK+ R
Sbjct: 145 LRGRKADVVLSDMAPSFSGNFLTDSQHQLRLCHNALKMAELYLRPGGNFATKILRCDGSE 204
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V + KPQ+SR ES E+F+V + +
Sbjct: 205 EFRADLKEAFDVVKAMKPQSSRPESTEMFLVAKGF 239
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
G RSRAAFKL +LN +F+ L++ + +DL AAPGGW Q+A
Sbjct: 50 GLRSRAAFKLRELNDRFQLLRRGDMVLDLGAAPGGWTQIA 89
>gi|221134032|ref|ZP_03560337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Glaciecola sp. HTCC2999]
Length = 206
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T + AI +EL +VD V+ D +PN+ N D Y L AL +A +LK G
Sbjct: 96 DFTDEAVYNAILKELGDDRVDTVVSDMAPNLSGNNTTDQYSSIYLVELALDMARNVLKPG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F KVF+ Y + +Q F +V KP ASR S E++VV + +
Sbjct: 156 GGFCAKVFQGVGYEEYVKEVRQSFSKVIIRKPAASRPRSREVYVVGKGF 204
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ------NMMASSIIHFD 241
GYRSRA++KLI++N K + ++ + +DL +APGGW QV ++AS I+ D
Sbjct: 27 GYRSRASYKLIEINEKDQLVRPGNIVMDLGSAPGGWSQVLAPMVGDAGRVIASDILPMD 85
>gi|449303578|gb|EMC99585.1| hypothetical protein BAUCODRAFT_144985 [Baudoinia compniacensis
UAMH 10762]
Length = 375
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FRSKD L
Sbjct: 164 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGRFVAKIFRSKDVDLLYAQ 223
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K +F+ V KP++SR S E FVVC ++ P
Sbjct: 224 LKVVFETVAVAKPRSSRASSVEAFVVCTNFRPP 256
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFEDVSRVVDLCAAPGSWSQVLSRVLI 64
>gi|360043701|emb|CCD81247.1| putative ribosomal RNA methyltransferase [Schistosoma mansoni]
Length = 343
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + +V+ DG+P+V D Y Q L L A+ + S +L+ G
Sbjct: 101 DITSQDTAQQIIKHFDGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAAVTICSRVLELG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQ-RVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR +D L + LF V KP+ASR S E FV+C+ ++ P
Sbjct: 161 GTFVAKVFRGRDSGLLGSQLRCLFSGEVSFAKPRASRNSSLESFVICRGFMGP 213
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV----CVDLCAAPGGWMQVAKQNMMAS 235
G+R+R+A+KL+Q++ ++ VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAYKLLQIDDEYGIFSTENTPLERVVDLCAAPGSWSQVLSKRLWES 70
>gi|195157878|ref|XP_002019821.1| GL12002 [Drosophila persimilis]
gi|194116412|gb|EDW38455.1| GL12002 [Drosophila persimilis]
Length = 316
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT + AI + K +V+ DG+P+ GM+ +D Y Q L L AL +++ IL+
Sbjct: 97 DITKESTAQAIIEYFEGQKAQLVVSDGAPDSTGMH-DFDVYMQGELLLSALSISTFILET 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG V K++R+ + + L ++ F+ V KP ASR S E FVV + + P
Sbjct: 156 GGSLVAKIYRADNTSRLYLQLQRFFKDVCVFKPSASRNSSIEAFVVARQFCLP 208
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q F L VDLCAAPG W QV ++M
Sbjct: 19 QGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVLSKHM 63
>gi|70937915|ref|XP_739701.1| ribosomal RNA methyltransferase [Plasmodium chabaudi chabaudi]
gi|56516893|emb|CAH75037.1| ribosomal RNA methyltransferase, putative [Plasmodium chabaudi
chabaudi]
Length = 245
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 33 VGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL-WIFKQLFQRVHS 91
GMN + D + Q L L +LK+ +LK GG F++K+FR +YT LL + + F++++
Sbjct: 4 TGMNDI-DEFIQSQLILSSLKVCCSVLKVGGNFISKIFRG-EYTGLLIFHLNKFFEKIYV 61
Query: 92 TKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
KPQ+SR +S E F+VC ++ P T F
Sbjct: 62 CKPQSSRNKSLESFLVCLNFGLPKSAITSLF 92
>gi|440638152|gb|ELR08071.1| ribosomal RNA large subunit methyltransferase E [Geomyces
destructans 20631-21]
Length = 372
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + L + K D+VL DG+P+V D Y Q L AL LA +L+ G
Sbjct: 148 DITHPATVPLLLENLGSAKADLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLRPG 207
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR +D L K F+ V KP++SR S E FVVC ++ P
Sbjct: 208 GKFVAKIFRGRDVDLLYAQLKLFFETVVVAKPRSSRASSVEAFVVCLNFQPPEGYHASLS 267
Query: 123 DP 124
+P
Sbjct: 268 EP 269
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFQDVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|124512936|ref|XP_001349824.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
gi|23615241|emb|CAD52231.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
Length = 288
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 21 KVDVVLHDGS-PNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K+D++L D + P +G N + D + C LTL + GG ++ K++ +L
Sbjct: 175 KIDIILSDAAVPCIG-NKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLK 233
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
K +FQ VH+TKP+ASR ES EI++VC++++ K+
Sbjct: 234 TYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGRKKI 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAA+KLI+L+ K+ FL+K+K+ +D+ PG W QV
Sbjct: 71 YRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQV 108
>gi|407864530|gb|EKG07971.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 432
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR + L+
Sbjct: 216 KADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRCGGTFVTKIFRGPNTPFLVA 275
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----------KLDTKFFDPKY---- 126
+ F+ V KP++SR S E F+VCQ Y PA T+ F P
Sbjct: 276 KSEVFFRHVIIAKPRSSRNASMEAFMVCQDYQPPAGYRPSFDRPLTTTTRCFTPAAPLPP 335
Query: 127 AFKELGAEDGKLNALKKKQVEKSKAL 152
AF L +E ++ KK VE +
Sbjct: 336 AFMHLQSEGQQITQKGKKGVEDQACM 361
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+QL +F L + + VDLCAAPG W Q+ +++
Sbjct: 62 GYRARSAYKLLQLQEEFNILNRDDIQTGVVDLCAAPGSWSQLLSRHL 108
>gi|198455401|ref|XP_001359976.2| GA20027 [Drosophila pseudoobscura pseudoobscura]
gi|198133228|gb|EAL29128.2| GA20027 [Drosophila pseudoobscura pseudoobscura]
Length = 316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPN-VGMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT + AI + K +V+ DG+P+ GM+ +D Y Q L L AL +++ IL+
Sbjct: 97 DITKESTAEAIIEYFEGQKAQLVVSDGAPDSTGMH-DFDVYMQGELLLSALSISTFILET 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
GG V K++R+ + + L ++ F+ V KP ASR S E FVV + + P
Sbjct: 156 GGSLVAKIYRADNTSRLYLQLQRFFKDVCVFKPSASRNSSIEAFVVARQFCLP 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+G+R+R+AFKL+Q F L VDLCAAPG W QV ++M
Sbjct: 19 QGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVLSKHM 63
>gi|149243225|pdb|2PLW|A Chain A, Crystal Structure Of A Ribosomal Rna Methyltransferase,
Putative, From Plasmodium Falciparum (Pf13_0052)
Length = 201
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 21 KVDVVLHDGS-PNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K+D++L D + P +G N + D + C LTL + GG ++ K++ +L
Sbjct: 106 KIDIILSDAAVPCIG-NKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLK 164
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAK 116
K +FQ VH+TKP+ASR ES EI++VC++++ K
Sbjct: 165 TYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGRKK 201
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAA+KLI+L+ K+ FL+K+K+ +D+ PG W QV
Sbjct: 2 YRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQV 39
>gi|408406026|ref|YP_006864010.1| ribosomal RNA large subunit, methyltransferase E [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408366622|gb|AFU60352.1| ribosomal RNA large subunit, methyltransferase E [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 198
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 51/99 (51%)
Query: 13 ITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRS 72
I L K DVVL D +PNV W D Q L+ AL A IL+ GG V KVF
Sbjct: 98 IAGILDGGKADVVLSDLAPNVSGVWDVDHARQISLSTIALGFARQILRAGGSAVFKVFEG 157
Query: 73 KDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F RV +KP ASR+ES+E+++VC +
Sbjct: 158 DMLNEFRAELKKSFGRVFLSKPSASRQESSELYIVCLDF 196
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA-KQNMMASSIIHFDDESVL 246
+GYR+R+A+KL+QLN + L+K VDL APGGW+QVA K+ A ++ D + V
Sbjct: 18 QGYRARSAYKLLQLNSSYRILKKGSKVVDLGCAPGGWLQVATKEVGQAGKVVGIDLKPVE 77
Query: 247 KHPSTTV 253
TV
Sbjct: 78 PVLGATV 84
>gi|171682198|ref|XP_001906042.1| hypothetical protein [Podospora anserina S mat+]
gi|170941058|emb|CAP66708.1| unnamed protein product [Podospora anserina S mat+]
Length = 385
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 175 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQ 234
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++VH KP++SR S E F+VC ++ P +P
Sbjct: 235 LKVFFEKVHVAKPRSSRASSVEAFIVCINFQPPEGFKASLEEP 277
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|340779414|ref|ZP_08699357.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter aceti NBRC 14818]
Length = 218
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%)
Query: 16 ELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
E+ K D+VL D +PN + D L GAL A +L EGG F+ KVF+
Sbjct: 107 EMLGGKADLVLSDMAPNTTGHAPTDHMRIIGLAEGALDFAFDVLAEGGGFIAKVFQGGSE 166
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+L K+LF V KP ASRK+S+E++VV +
Sbjct: 167 KQMLEPMKKLFASVRHVKPPASRKDSSELYVVATGF 202
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+G+RSRAAFKLI+++ +F ++ + VDL AAPGGW QVA + AS +I D
Sbjct: 27 QGWRSRAAFKLIEIDDRFHLIKPGQRVVDLGAAPGGWTQVAVKR-GASHVIGVD 79
>gi|198477577|ref|XP_002136545.1| GA23223 [Drosophila pseudoobscura pseudoobscura]
gi|198142832|gb|EDY71545.1| GA23223 [Drosophila pseudoobscura pseudoobscura]
Length = 232
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT + AI + K +V+ DG+P+ +D Y Q L L AL +++ IL+ G
Sbjct: 13 DITKESTAEAIIEYFEGQKAQLVVSDGAPDSTGMHDFDVYMQGELLLSALSISTFILETG 72
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G V K++R+ + + L ++ F+ V KP ASR S E FVV + + P
Sbjct: 73 GSLVAKIYRADNTSRLYLQLQRFFKDVCVFKPSASRNSSIEAFVVARQFCLP 124
>gi|209876181|ref|XP_002139533.1| tRNA (uridine-2'-O-)-methyltransferase protein [Cryptosporidium
muris RN66]
gi|209555139|gb|EEA05184.1| tRNA (uridine-2'-O-)-methyltransferase protein, putative
[Cryptosporidium muris RN66]
Length = 264
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I K D+VL DG+P+V D + Q L L AL + + +L +G
Sbjct: 93 DITSQNTVDIILDYFGGEKADLVLCDGAPDVTGFHDIDEFIQNQLLLSALSITTKLLCDG 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQL---FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
G FV K+FR ++ + +I++Q+ F+ V KP +SR S E F+VC+++ + AKL
Sbjct: 153 GSFVAKIFRGEN---IAFIYQQMFYYFEYVDCCKPASSRNSSLEAFIVCRNFNS-AKLTR 208
Query: 120 KFFDPKYAFKELGAEDGKLN 139
++ + D +N
Sbjct: 209 DLISDPFSVPFIACGDLSIN 228
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+Q+++ + + VDLCAAPG W QV Q +
Sbjct: 20 GYRARSAYKLLQVDQYYPIFKGVNRAVDLCAAPGSWSQVLSQKL 63
>gi|124487850|gb|ABN12008.1| Ftsj homolog 1-like protein [Maconellicoccus hirsutus]
Length = 206
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+++V+ DG+P+V D + Q L L A+ + + +LK GG F+ K+FR D L
Sbjct: 56 IELVVFDGAPDVTGIHDLDEFVQGQLLLAAVNITTFLLKPGGSFIGKIFRGSDNALLKSQ 115
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
F+ V TKP++SR S E FVVC+ + P + +P
Sbjct: 116 LLLFFKDVIITKPRSSRNSSMESFVVCRGFALPENYEPNLLNP 158
>gi|320593423|gb|EFX05832.1| trm7-like tRNA methyltransferase [Grosmannia clavigera kw1407]
Length = 385
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ L
Sbjct: 177 VDLVLSDGAPDVTGLHDLDMYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDLLFAQ 236
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
K F+RV KP++SR S E F+VC + PA
Sbjct: 237 LKLFFRRVVVAKPRSSRASSVEAFIVCLDFCPPAGF 272
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFSGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|161899253|ref|XP_001712853.1| Sbp1 [Bigelowiella natans]
gi|75756346|gb|ABA27241.1| Sbp1 [Bigelowiella natans]
Length = 286
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D +L+DGSPNVG + D+ Q L + K+A +L++GG V+K F SK+ +++
Sbjct: 144 DCLLNDGSPNVGTENIIDSEMQNGLAFFSFKIAIKVLRDGGSLVSKFFISKNLNIFIYLL 203
Query: 83 KQLFQRVHSTKPQASRKESAEIFVV 107
+ LF+ V KP ASR S+E++++
Sbjct: 204 RILFKYVIILKPNASRVHSSEVYIL 228
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
+RSR+AFKLIQ+ +KF L+ + +DLC PGGW+Q+ +
Sbjct: 56 FRSRSAFKLIQIEKKFNLLRFTNRIIDLCCFPGGWLQIIQ 95
>gi|71668248|ref|XP_821060.1| ribosomal RNA methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70886427|gb|EAN99209.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 390
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR + L+
Sbjct: 174 KADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRCGGTFVTKIFRGPNTPFLVA 233
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA----------KLDTKFFDP----KY 126
+ F+ V KP++SR S E F+VCQ Y PA T+ F P
Sbjct: 234 KSEVFFRHVIIAKPRSSRNASMEAFMVCQDYQPPAGYRPSFDRPLTTTTRCFTPVAPLPP 293
Query: 127 AFKELGAEDGKLNALKKKQVEKSKAL 152
AF L +E ++ +KK VE +
Sbjct: 294 AFMHLQSEGRQITQKEKKGVEDQACM 319
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+QL+ +F L + ++ V LCAAPG W Q+ +++
Sbjct: 20 GYRARSAYKLLQLHEEFNILNRDEIQTGVVVLCAAPGSWSQLLARHL 66
>gi|294901600|ref|XP_002777432.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
gi|239885068|gb|EER09248.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++K + D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 99 DITSEKTVKEVLDCFGGQLSDLVVCDGAPDVTGMHDMDEYVQFQLLLAALNITTLLLKPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV KVFR ++ L F+ V KP++SR S E F+VC+++ P + +
Sbjct: 159 GSFVAKVFRGENVDLLYAKMYVFFECVWVAKPRSSRNSSVESFIVCKNFRLPKGYTPRLY 218
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+Q++ +F L + VDLCAAPG W QV + +
Sbjct: 20 GYRARSAYKLLQVDEQFHILTDDLERVVDLCAAPGSWSQVLSKKL 64
>gi|294948998|ref|XP_002786001.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
gi|239900109|gb|EER17797.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++K + D+V+ DG+P+V D Y Q L L AL + + +LK G
Sbjct: 99 DITSEKTVKEVLDCFGGQLSDLVVCDGAPDVTGMHDMDEYVQFQLLLAALNITTLLLKPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV KVFR ++ L F+ V KP++SR S E F+VC+++ P + +
Sbjct: 159 GSFVAKVFRGENVDLLYAKMYVFFECVWVAKPRSSRNSSVESFIVCKNFRLPKGYTPRLY 218
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+Q++ +F L + VDLCAAPG W QV + +
Sbjct: 20 GYRARSAYKLLQVDEQFHILTDDLERVVDLCAAPGSWSQVLSKKL 64
>gi|46134619|ref|XP_389476.1| hypothetical protein FG09300.1 [Gibberella zeae PH-1]
Length = 373
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 169 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 228
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 229 LKIFFEKVIVAKPRSSRASSVEAFIVCINFQPPAGFRASLEEP 271
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFADVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|194227880|ref|XP_001493665.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like [Equus
caballus]
Length = 301
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 91 DITQLSTAQEIIRHFEGCPADLVVCDGAPDVTGLHDV-DEYMQAQLLLAALNIATHVLKP 149
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKES 101
GG FV K+FR +D T + + F V KP++SR S
Sbjct: 150 GGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPRSSRNSS 189
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
G+R+R+AFKL+QL+ +F+ Q VDLCAAPG W QV Q + H
Sbjct: 19 NGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|408390785|gb|EKJ70172.1| hypothetical protein FPSE_09698 [Fusarium pseudograminearum CS3096]
Length = 373
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 169 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 228
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 229 LKIFFEKVIVAKPRSSRASSVEAFIVCINFQPPAGFRASLEEP 271
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFADVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|346430313|emb|CCC55571.1| 23S rRNA methyltransferase, partial [uncultured archaeon]
Length = 163
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 7 DKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFV 66
D+ + I R + DV+L D SPN+ W D Q L+ AL+LA +LK+GG V
Sbjct: 47 DQGLVEILRVHAPFGYDVLLSDLSPNISGAWELDHARQIALSRRALELAGQLLKDGGNSV 106
Query: 67 TKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
KVF+ ++ L + F H KP+ASR +S+E+++V
Sbjct: 107 FKVFQGNEFNRFLSEVRSTFLETHVVKPKASRSQSSELYLV 147
>gi|282164555|ref|YP_003356940.1| ribosomal RNA large subunit methyltransferase J [Methanocella
paludicola SANAE]
gi|282156869|dbj|BAI61957.1| ribosomal RNA large subunit methyltransferase J [Methanocella
paludicola SANAE]
Length = 254
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 18 KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTS 77
K KV+ V+ D +PN+ NW D L+ AL +A+ IL GG F+ KVF+ Y
Sbjct: 97 KVEKVNAVICDAAPNLSGNWALDHARSIDLSKTALDVAAKILAPGGNFLVKVFQGDLYQG 156
Query: 78 LLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI 112
+ + F RV++ K ASR++SAEI+V+ + ++
Sbjct: 157 FVDEVGRRFSRVYTYKSPASRQQSAEIYVIGKGFL 191
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV--- 245
GYRSRAAFKL +N KF ++K VDL AAPGGW+QVAK+ + ++I D + +
Sbjct: 17 GYRSRAAFKLKFINEKFGLIKKGDAVVDLGAAPGGWLQVAKE-ISEGTVIGVDLQRIEPV 75
Query: 246 ---------LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLHDEKTEKEK 289
+ P T +I E + + + NL W + H + K
Sbjct: 76 EGAVTIKGDMTSPETQAKIFEKVEKVNAVICDAAPNLSGNWALDHARSIDLSK 128
>gi|195438774|ref|XP_002067307.1| GK16249 [Drosophila willistoni]
gi|194163392|gb|EDW78293.1| GK16249 [Drosophila willistoni]
Length = 306
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ D T L
Sbjct: 119 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVSALSIATFVLEPGGSFVAKIFKGNDTTLLDS 178
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F+ KP +SR S E FVVC+ + P + +P
Sbjct: 179 QMRTFFKHFEYYKPLSSRPSSIEHFVVCRDFFLPPGYIPQVINP 222
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+ ++ F+ K VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLMHIDDAFKIFSGVKRVVDLCAAPGSWSQVLSRKL 63
>gi|301109152|ref|XP_002903657.1| ribosomal RNA large subunit methyltransferase J, putative
[Phytophthora infestans T30-4]
gi|262097381|gb|EEY55433.1| ribosomal RNA large subunit methyltransferase J, putative
[Phytophthora infestans T30-4]
Length = 243
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D R + L+ K DVVL D +P+ N++ D+ HQ L ALK+A L+ G
Sbjct: 128 DFRQAAVRKQLAEALRGRKADVVLSDMAPSFSGNFLTDSQHQLRLCHNALKMAELYLRPG 187
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F TKV R K F V KPQ+SR ES E+F+V + +
Sbjct: 188 GNFATKVLRCDGSEEFRADLKASFDVVKGMKPQSSRPESTEMFLVAKGF 236
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 13/66 (19%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ-------------NMMAS 235
G RSRAAFKL +LN +F+ L++ + +DL AAPGGW QVA + ++A
Sbjct: 52 GLRSRAAFKLRELNDRFQLLRRGDMVLDLGAAPGGWTQVAVEATTPKSQKTVGPPRVVAV 111
Query: 236 SIIHFD 241
++HFD
Sbjct: 112 DLLHFD 117
>gi|284163460|ref|YP_003401739.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Haloterrigena turkmenica
DSM 5511]
gi|284013115|gb|ADB59066.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Haloterrigena turkmenica
DSM 5511]
Length = 261
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T +K R +T + VDVV+ D +PN+ + D L A + A +L+ G
Sbjct: 90 DMTEEKTRDRVT-DAAGGSVDVVVSDMAPNMSGEYSLDQARSLYLARQAFETALELLESG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D L FQ V +T P+ASR+ES+EI+++ + + AP +
Sbjct: 149 GNFVVKVFEGPDVDDLRADIDDEFQYVRATAPKASREESSEIYLIGKGRLTAPVR 203
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFD 241
+GYRSRAA+KL QL+ + VDL AAPGGW+QVA + + ++I D
Sbjct: 14 QGYRSRAAYKLKQLDDLENVISGHDTVVDLGAAPGGWLQVAAEKVGPQGTVIGVD 68
>gi|154314078|ref|XP_001556364.1| hypothetical protein BC1G_04982 [Botryotinia fuckeliana B05.10]
gi|347831309|emb|CCD47006.1| similar to tRNA (uridine-2'-O-)-methyltransferase TRM7 [Botryotinia
fuckeliana]
Length = 385
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ L
Sbjct: 154 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDLLFAQ 213
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F+RV KP++SR S E F+VC ++ P DP
Sbjct: 214 LKIFFERVVVAKPRSSRASSVEAFIVCLNFQPPEGFKASMEDP 256
>gi|149241908|ref|XP_001526378.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450501|gb|EDK44757.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 334
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 52/109 (47%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K I D V DG+P+V D Y Q L AL+L + ILK G
Sbjct: 130 DITHPKTLQQILDCFDNELADFVCSDGAPDVTGLHDLDEYVQHQLVWAALQLTTCILKPG 189
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F K+FR KD + F + F RV KP++SR S E F+V Y
Sbjct: 190 GSFAAKIFRGKDIDVMYKQFSKFFDRVVCAKPRSSRGTSLEAFIVGLGY 238
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKS-KVCVDLCAAPGGWMQVAKQNMMASS 236
G+R+R+A+KL+QL+++F L + K VDLCAAPG W QV + + +S+
Sbjct: 20 GWRARSAYKLLQLDQEFNLLNSNVKRVVDLCAAPGSWSQVLSKRLHSST 68
>gi|407392062|gb|EKF26258.1| ribosomal RNA methyltransferase, putative, partial [Trypanosoma
cruzi marinkellei]
Length = 448
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR + L+
Sbjct: 231 KADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRRGGTFVTKMFRGPNTPFLVA 290
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKL-N 139
+ F+ V KP++SR S E F+VCQ Y PA F P L
Sbjct: 291 KSEVFFRHVIIAKPRSSRNVSMEAFMVCQDYQPPAGYSPSFDRPLTTTTRCFTPAAPLPP 350
Query: 140 ALKKKQVEKSKAL 152
AL ++Q E +A+
Sbjct: 351 ALMQQQNEDPQAI 363
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL+QL+ +F L + + VDLCAAPG W Q+ +++
Sbjct: 76 EGYRARSAYKLLQLHEEFNILHRDGIQTGVVDLCAAPGSWSQLLARHL 123
>gi|330506929|ref|YP_004383357.1| ribosomal RNA large subunit methyltransferase J [Methanosaeta
concilii GP6]
gi|328927737|gb|AEB67539.1| ribosomal RNA large subunit methyltransferase J [Methanosaeta
concilii GP6]
Length = 256
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYR+R+A+KL+Q+N KF ++K VDL AAPGGW+QVA Q + I+ D E +
Sbjct: 17 GYRARSAYKLLQINEKFHVIKKGDSVVDLGAAPGGWLQVA-QKLSGGKIVGVDLEGITPI 75
Query: 249 PSTT 252
P
Sbjct: 76 PGVV 79
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
DVV+ D +PN+ W D L AL++A +L+ G FV KVF+ + L
Sbjct: 103 DVVICDAAPNLSGAWDRDHAISIDLARSALEMAKKLLRPRGNFVVKVFQGDMFIDFLNDV 162
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
++ F VH+ P ASRKESAE +VV + + AP +
Sbjct: 163 RREFAVVHAHSPAASRKESAETYVVGKKLLSAPVR 197
>gi|256075992|ref|XP_002574299.1| ribosomal RNA methyltransferase [Schistosoma mansoni]
Length = 300
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+ I + +V+ DG+P+V D Y Q L L A+ + S +L+ G
Sbjct: 101 DITSQDTAQQIIKHFDGKLAQLVVCDGAPDVTGLHDLDEYVQSHLILAAVTICSRVLELG 160
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQ-RVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVFR +D L + LF V KP+ASR S E FV+C+ ++ P
Sbjct: 161 GTFVAKVFRGRDSGLLGSQLRCLFSGEVSFAKPRASRNSSLESFVICRGFMGP 213
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV----CVDLCAAPGGWMQVAKQNMMAS 235
G+R+R+A+KL+Q++ ++ VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAYKLLQIDDEYGIFSTENTLLERVVDLCAAPGSWSQVLSKRLWES 70
>gi|448388520|ref|ZP_21565295.1| 23S rRNA methyltransferase J [Haloterrigena salina JCM 13891]
gi|445670275|gb|ELZ22878.1| 23S rRNA methyltransferase J [Haloterrigena salina JCM 13891]
Length = 260
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T +K R +T + VDVV+ D +PN+ + D L A + A +L+ G
Sbjct: 90 DMTEEKTRDRVT-DAAGGSVDVVVSDMAPNMSGEYSLDQARSLYLARQAFETALELLESG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D L FQ V +T P+ASR+ES+EI+++ + + AP +
Sbjct: 149 GNFVVKVFEGPDVDDLRADIDDEFQYVRATAPKASREESSEIYLIGKGRLTAPVR 203
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFD 241
+GYRSRAA+KL QL+ + VDL AAPGGW+QVA + + ++I D
Sbjct: 14 QGYRSRAAYKLKQLDDLENVISGHDTVVDLGAAPGGWLQVAAEKVGPQGTVIGVD 68
>gi|221480608|gb|EEE19062.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii GT1]
Length = 342
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCC-LTLGALKLASGILKEGGWFVTKVF 70
A+ EL K DVVL D +P+ + D + C L L A L +LK GG FVTK+F
Sbjct: 220 ALLEELGESKADVVLSDMAPSC-IGVKQDDHLNCAELCLFASDLMEQVLKLGGTFVTKMF 278
Query: 71 RSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+ + + F++V S KP+A R+ES E++ VCQH++ +L
Sbjct: 279 MGSETNNFKVYLRTRFKKVSSAKPRACRQESREMYFVCQHFVGRDRL 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 191 RSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
RSRAAFKL QL+ F F +K++V VDL A PGGW QVA + A
Sbjct: 141 RSRAAFKLEQLDDDFLFFRKNQVVVDLGAYPGGWSQVALDRIRAGG 186
>gi|58040688|ref|YP_192652.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans 621H]
gi|81351345|sp|Q5FNQ1.1|RLME_GLUOX RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|58003102|gb|AAW61996.1| Ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans 621H]
Length = 268
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D+V+ D +PN + D L GAL A +L EGG F+ KVF+ +L +
Sbjct: 167 ADLVMSDMAPNTTGHAATDHMRIMGLAEGALDFAFQVLAEGGSFIAKVFQGGSEKDMLAL 226
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K F V KP ASRKES+E++V+ +
Sbjct: 227 MKTAFSSVKHVKPPASRKESSELYVIATGF 256
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKLI+++ +F+ + + +DL AAPGGW QVA
Sbjct: 81 QGWRSRAAFKLIEIDDRFKLIGEGTRIIDLGAAPGGWTQVA 121
>gi|440295993|gb|ELP88839.1| ribosomal RNA methyltransferase, putative [Entamoeba invadens IP1]
Length = 231
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT K + K D+V+ DG+P+V D +Q L A + + +LK G
Sbjct: 85 DITKGKTAKEVMSHFVDGKADLVICDGAPDVTGVHDIDEANQWILMQAAFSIMAVVLKSG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV K+F ++ L + FK +F+ V KP +SR S E FVVC+ +
Sbjct: 145 GSFVAKIFVEGEHPHLYFQFKSVFESVTIYKPDSSRSASFEHFVVCKGF 193
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+AFKLI + R F VDLCAAPG W QV ++
Sbjct: 16 GYRARSAFKLIDVERDFHIFSNVHKVVDLCAAPGSWSQVLSSSI 59
>gi|432115993|gb|ELK37132.1| Putative ribosomal RNA methyltransferase 1 [Myotis davidii]
Length = 315
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
DIT I R + D+V+ DG+P+V G++ V D Y Q L L AL +A+ +LK
Sbjct: 92 DITQLSTAEDIFRHFEGCPADLVVCDGAPDVTGLHEV-DEYLQAQLLLAALNIAAHVLKP 150
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKL 117
GG FV K+FR +D T + F V KP +SRK S E F VCQ Y P L
Sbjct: 151 GGCFVAKIFRGRDMTLIYSQLHVFFSSVLCAKPSSSRKASREAFAVCQGYDPPEGFLPDL 210
Query: 118 DTKFFDPKYAFKELGAEDGKLNAL 141
DP Y + L DG ++
Sbjct: 211 TKPLPDPSYN-RGLNQSDGPTRSI 233
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+QLN +F + VDLCAAPG W QV Q +
Sbjct: 19 NGWRARSAFKLLQLNEEFRLFEGVTRAVDLCAAPGSWSQVLSQKI 63
>gi|358398922|gb|EHK48273.1| hypothetical protein TRIATDRAFT_81759 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D + D +A T+ VD+VL DG+P+V D Y Q L AL LA +LK G
Sbjct: 162 DPSYDPAAVAGTQAQH--PVDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPG 219
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFF 122
G FV K+FR ++ L K F++V KP++SR S E F+VC ++ PA
Sbjct: 220 GKFVAKIFRGRNVDILYAQLKIFFEKVIVAKPRSSRASSVEAFIVCLNFRPPAGFQASLE 279
Query: 123 DP 124
+P
Sbjct: 280 EP 281
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFSNVSRVVDLCAAPGSWSQVLSRVLI 64
>gi|340378876|ref|XP_003387953.1| PREDICTED: hypothetical protein LOC100633473 [Amphimedon
queenslandica]
Length = 394
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 46/62 (74%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
+V++YRKK EIN RPI+K+ EAKARKK+R AR++ K ++K + + PDV+D +K R I
Sbjct: 271 MVDKYRKKLKEINARPIKKIAEAKARKKQRAARKLTKAREKARVICDTPDVTDQKKVRQI 330
Query: 539 RA 540
+
Sbjct: 331 KG 332
>gi|358387388|gb|EHK24983.1| hypothetical protein TRIVIDRAFT_30659 [Trichoderma virens Gv29-8]
Length = 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 177 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDILYAQ 236
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 237 LKIFFEKVIVAKPRSSRASSVEAFIVCLNFRPPAGFHASLEEP 279
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFSNVSRVVDLCAAPGSWSQVLSRVLI 64
>gi|209963501|ref|YP_002296416.1| ribosomal RNA large subunit methyltransferase J [Rhodospirillum
centenum SW]
gi|209956967|gb|ACI97603.1| ribosomal RNA large subunit methyltransferase J,RrmJ
[Rhodospirillum centenum SW]
Length = 227
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 34/41 (82%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+GYRSRAAFKL+QL+ KF FL++ + VDL AAPGGW QVA
Sbjct: 32 RGYRSRAAFKLLQLDEKFHFLRRGQRIVDLGAAPGGWTQVA 72
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
+EL + D+VL D + N + D L A A+ +L GG FV K+F+
Sbjct: 117 KELLGGQADIVLSDMAANTTGHPATDHLRIIGLAEAAYDFAADVLAPGGAFVCKLFQGGA 176
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
LL + K+ F V KP ASR +S+E +VV + + D +
Sbjct: 177 TKGLLDLLKRDFATVRHAKPPASRADSSETYVVATGFRGSSSADDR 222
>gi|406998713|gb|EKE16608.1| hypothetical protein ACD_10C00894G0002 [uncultured bacterium]
Length = 208
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%)
Query: 16 ELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
+L K+DV+L D +P+ D + L AL +A +LK GG FV KVF +Y
Sbjct: 103 KLAAGKLDVILSDMAPDTTGVHYADTENSALLVHLALDIAEKLLKPGGSFVAKVFEGAEY 162
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+LL K++F S P+AS S E+F+V Q + PA
Sbjct: 163 QALLQRTKKMFGFAKSFNPKASLNRSRELFLVAQEFKGPA 202
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFDDESVLKH 248
+RSRAA+KL +++ K++ ++ +DL AAPG W Q A + + + II D +
Sbjct: 23 FRSRAAYKLEEIDEKYKLIRPGSKILDLGAAPGSWSQYAMRKVAGKAKIIAIDLLEIYPI 82
Query: 249 PSTTVEIQECCKDIR 263
T+ +Q +DI+
Sbjct: 83 EGVTI-LQGDIRDIK 96
>gi|383320393|ref|YP_005381234.1| 23S rRNA Um2552-methyltransferase [Methanocella conradii HZ254]
gi|379321763|gb|AFD00716.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanocella conradii
HZ254]
Length = 261
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 18 KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTS 77
K KV+VV+ D +PN+ NW D L AL +AS +L GG F+ KVF+ Y
Sbjct: 106 KVEKVNVVICDAAPNLTGNWALDHARSIDLAKTALDVASRLLVPGGNFLVKVFQGDLYQG 165
Query: 78 LLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI 112
+ ++ F RV++ K ASR +SAEI+V+ + ++
Sbjct: 166 FVEEAEKRFSRVYTYKSPASRAQSAEIYVIGKGFL 200
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV--- 245
GYRSRAAFKL +N KF ++ V VDL AAPGGW+QVAK+ + ++I D + +
Sbjct: 26 GYRSRAAFKLKFINEKFGIIKAGDVVVDLGAAPGGWLQVAKE-LSGGTVIGVDLQKIEPI 84
Query: 246 ---------LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLH 281
+ P T +I E + + V+ NL W + H
Sbjct: 85 EGVITIKGDMTSPETQQKIFEKVEKVNVVICDAAPNLTGNWALDH 129
>gi|156060649|ref|XP_001596247.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154699871|gb|EDN99609.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 367
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ L
Sbjct: 139 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDLLFAQ 198
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F+RV KP++SR S E F+VC ++ P DP
Sbjct: 199 LKIFFERVVVAKPRSSRASSVEAFIVCLNFQPPEGFKASMEDP 241
>gi|148702027|gb|EDL33974.1| Ftsj homolog 1 (E. coli), isoform CRA_c [Mus musculus]
Length = 310
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + + D+V+ DG+P+ +C AL +A+ +LK G
Sbjct: 91 DITQLSTAKEIIQHFEGCPADLVVCDGAPD----------GKC----AALNIATHVLKLG 136
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 137 GCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQGYDPP 188
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM---MASSIIHFDDESV 245
G+R+R+AFKL+QL+ +F+ + K VDLCAAPG W QV Q + + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVGGQGSGQVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P ++IQ
Sbjct: 80 APLPG-VIQIQ 89
>gi|195060807|ref|XP_001995863.1| GH14141 [Drosophila grimshawi]
gi|193891655|gb|EDV90521.1| GH14141 [Drosophila grimshawi]
Length = 311
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 3 DITTDKCRIAITRELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGIL 59
DIT + AI + K +V+ DG+P+V D Y Q L + AL LA+ +L
Sbjct: 98 DITQESTAEAIIAHFGSGDDQKAQLVVCDGAPDVTGFHEMDEYMQNQLIVSALSLATCVL 157
Query: 60 KEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+ GG FV K+F + L + F+ H KP +SR S E FVVC + PA
Sbjct: 158 EPGGKFVAKIFNVTENDLLETQMRTFFKHFHIYKPPSSRPSSYEAFVVCSDFRLPAGYIP 217
Query: 120 KFFDP 124
+ +P
Sbjct: 218 QIINP 222
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+AFKL+ ++ +F + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLHIHEQFSIFDGVQRAVDLCAAPGSWSQVLSRKLF 64
>gi|294891102|ref|XP_002773421.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239878574|gb|EER05237.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 532
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L+N+YR K EIN RP+RKV EA ARKKKR ++++K++K +L E+ D+ D+ KAR +
Sbjct: 391 LMNQYRAKMREINARPVRKVAEAAARKKKRLTQQLEKLRKTATSLQESSDLGDSGKARAM 450
Query: 539 R 539
R
Sbjct: 451 R 451
>gi|347737999|ref|ZP_08869646.1| Ribosomal RNA large subunit methyltransferase E [Azospirillum
amazonense Y2]
gi|346919062|gb|EGY00760.1| Ribosomal RNA large subunit methyltransferase E [Azospirillum
amazonense Y2]
Length = 246
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
+GYRSRAAFKL+QL+ K+ L+ VDL AAPGGW QVA + + + ++ D
Sbjct: 54 RGYRSRAAFKLLQLDEKYHLLKPGTRVVDLGAAPGGWTQVAVEKVRGAKVVGLD 107
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 58 ILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+L GG FV K+F+ SLL + K+ F V KP ASR +S+E +VV +
Sbjct: 177 VLAPGGAFVAKLFQGGAERSLLDLLKRDFAVVRHAKPPASRADSSETYVVATGF 230
>gi|294495192|ref|YP_003541685.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanohalophilus mahii
DSM 5219]
gi|292666191|gb|ADE36040.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanohalophilus mahii
DSM 5219]
Length = 264
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT ++ I + D V+ D +PN+ NW D L AL+ A+ ILK
Sbjct: 84 DITREETVSQIKEAVGEDGADAVICDAAPNLSGNWNLDHARSIALAESALECATRILKPQ 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF+ + L + F V + P+ASR ESAEI+VV + ++ AP +
Sbjct: 144 GNFVVKVFQGDMFKEYLDKVRGEFTYVRAHSPEASRSESAEIYVVGKKFLTAPIR 198
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 34/42 (80%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+KL Q+N+KF +++ VDL AAPGGW++VA++
Sbjct: 17 GYRSRAAYKLQQINKKFNVIREDSDVVDLGAAPGGWLEVARE 58
>gi|440469811|gb|ELQ38908.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Magnaporthe oryzae
Y34]
gi|440476883|gb|ELQ58052.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Magnaporthe oryzae
P131]
Length = 385
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 152 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 211
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 212 LKVFFEKVIVAKPRSSRASSVEAFIVCLNFQPPAGFKASLDEP 254
>gi|389641715|ref|XP_003718490.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Magnaporthe oryzae
70-15]
gi|351641043|gb|EHA48906.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Magnaporthe oryzae
70-15]
Length = 403
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 170 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 229
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 230 LKVFFEKVIVAKPRSSRASSVEAFIVCLNFQPPAGFKASLDEP 272
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFANVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|258542575|ref|YP_003188008.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01]
gi|384042496|ref|YP_005481240.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-12]
gi|384051013|ref|YP_005478076.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-03]
gi|384054121|ref|YP_005487215.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-07]
gi|384057355|ref|YP_005490022.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-22]
gi|384059996|ref|YP_005499124.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-26]
gi|384063288|ref|YP_005483930.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-32]
gi|384119298|ref|YP_005501922.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|421850363|ref|ZP_16283324.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus NBRC 101655]
gi|421854034|ref|ZP_16286672.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
gi|256633653|dbj|BAH99628.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01]
gi|256636712|dbj|BAI02681.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-03]
gi|256639765|dbj|BAI05727.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-07]
gi|256642821|dbj|BAI08776.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-22]
gi|256645876|dbj|BAI11824.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-26]
gi|256648929|dbj|BAI14870.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-32]
gi|256651916|dbj|BAI17850.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654973|dbj|BAI20900.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-12]
gi|371458800|dbj|GAB28527.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus NBRC 101655]
gi|371477696|dbj|GAB31875.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus subsp. pasteurianus LMG 1262 =
NBRC 106471]
Length = 263
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ D +PN + D L AL A IL EGG FV KVF+ ++L
Sbjct: 163 KADLVVSDMAPNTTGHAPTDHVRIIGLAEEALHFAFDILAEGGGFVAKVFQGGSEKAMLN 222
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
KQ F +V KP ASRK+S+E++VV + P +++T+
Sbjct: 223 TMKQAFTQVRHAKPPASRKDSSELYVVATGF-RPDRINTQ 261
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
+G+RSRAAFKLI+L+ +F ++ VDL AAPGGW QV
Sbjct: 78 QGWRSRAAFKLIELDDRFHLIRPGMRIVDLGAAPGGWTQV 117
>gi|345560214|gb|EGX43339.1| hypothetical protein AOL_s00215g75 [Arthrobotrys oligospora ATCC
24927]
Length = 326
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L L AL LA+ +L+ G FV K+FR +D L
Sbjct: 134 VDLVVSDGAPDVTGLHDLDEYIQAQLLLAALNLATCVLRPSGNFVAKIFRGRDVAELYCK 193
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F+RV KP++SR S E FVVC++Y P +P
Sbjct: 194 LRIFFERVTVAKPRSSRGSSIEAFVVCENYTPPEGFQPSLENP 236
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
+GYR+R+A+KL+QL+ +F + VDLCAAPG W QV ++++A
Sbjct: 19 QGYRARSAYKLLQLDAQFNLFKDVTRVVDLCAAPGSWSQVLSRSLVA 65
>gi|399218110|emb|CCF74997.1| unnamed protein product [Babesia microti strain RI]
Length = 352
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 20 WKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSL 78
K D+VL DG+P+V G++ V D + Q L +L +A+ +L+ GG +++K+FR++ Y +
Sbjct: 190 MKADIVLCDGAPDVSGLHEV-DGFIQSELIRFSLHMATQVLRLGGTYISKMFRTEKYPFI 248
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ LF +V KP ASR S E F+V Q +
Sbjct: 249 ISRIGFLFDKVQVMKPSASRNSSVEAFIVAQGF 281
>gi|390949340|ref|YP_006413099.1| 23S rRNA methylase [Thiocystis violascens DSM 198]
gi|390425909|gb|AFL72974.1| 23S rRNA methylase [Thiocystis violascens DSM 198]
Length = 212
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
ED + R AI E +D+VL D +PN+ V D L AL LA LK
Sbjct: 100 EDSVLSQLREAIGAE----PLDLVLSDMAPNITGTVVTDQSRVVYLLELALDLARECLKP 155
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
GG V K F+ + + + L ++ F RV S KPQ+SR +S EI++V + ++A
Sbjct: 156 GGSLVVKAFQGEGFDAYLLELRRSFHRVASRKPQSSRAQSREIYLVAKGFMA 207
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+KL+++ K L +DL AAPG W Q+A +
Sbjct: 28 GYRSRAAYKLLEIQEKDRILTPGTRVLDLGAAPGSWSQIASR 69
>gi|221504430|gb|EEE30103.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii VEG]
Length = 342
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCC-LTLGALKLASGILKEGGWFVTKVF 70
A+ EL K DVVL D +P + D + C L L A L +LK GG FVTK+F
Sbjct: 220 ALLEELGESKADVVLSDMAPAC-IGVKQDDHLNCAELCLFASDLMEQVLKLGGTFVTKMF 278
Query: 71 RSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+ + + F++V S KP+A R+ES E++ VCQH++ +L
Sbjct: 279 MGSETNNFKVYLRTRFKKVSSAKPRACRQESREMYFVCQHFVGRDRL 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 191 RSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
RSRAAFKL QL+ F F +K++V VDL A PGGW QVA + A
Sbjct: 141 RSRAAFKLEQLDDDFLFFRKNQVVVDLGAYPGGWSQVALDRIRAGG 186
>gi|49473815|ref|YP_031857.1| cell division protein ftsJ [Bartonella quintana str. Toulouse]
gi|81647276|sp|Q6G0S9.1|RLME_BARQU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49239318|emb|CAF25648.1| Cell division protein ftsJ [Bartonella quintana str. Toulouse]
Length = 241
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFDDES 244
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA++ + +S S++ D
Sbjct: 55 GYRSRAAYKLIEMNERYKFLKKGQKIIDLGAAPGGWCQVAQRIVGSSDEKPSVVGIDYLP 114
Query: 245 VLKHPSTTV 253
V+ P +
Sbjct: 115 VVPLPGVIM 123
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DYLRTTYLCEVAADFALSVLKSGGHFLVKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
KQ F+ VH KP ASR ES E++++ + A
Sbjct: 203 TTLKQNFKTVHHVKPPASRTESVELYLLALEFKA 236
>gi|147919157|ref|YP_687110.1| 23S rRNA methyltransferase J [Methanocella arvoryzae MRE50]
gi|121685265|sp|Q0W1F9.1|RLME_UNCMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|110622506|emb|CAJ37784.1| 23S rRNA methyltransferase J [Methanocella arvoryzae MRE50]
Length = 256
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD V+ D +PN+ NW D L AL +A+ +LK+GG FV KVF+ Y + +
Sbjct: 102 VDTVICDAAPNLSGNWALDHARSIDLATVALDVATKLLKKGGNFVVKVFQGDLYENYVKE 161
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
+ F + K QASR++SAEI+V+ + ++ +
Sbjct: 162 VGKRFSYATTYKSQASRQQSAEIYVIGKGFLTTS 195
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV--- 245
GYRSRA+FKL +N+K ++K VDL AAPGGW+QVAK+ +I D + +
Sbjct: 17 GYRSRASFKLQFINKKHHIIKKGDTVVDLGAAPGGWLQVAKELNGGGKVIGVDLQRIEPI 76
Query: 246 ---------LKHPSTTVEIQECCKDIRVLGRKDVRNLLKWWKVLH 281
+ P T I E ++ + NL W + H
Sbjct: 77 EGVETIKGDMTSPETQARIFEIVDEVDTVICDAAPNLSGNWALDH 121
>gi|403530064|ref|YP_006664593.1| cell division protein ftsJ [Bartonella quintana RM-11]
gi|403232136|gb|AFR25879.1| cell division protein ftsJ [Bartonella quintana RM-11]
Length = 241
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFDDES 244
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA++ + +S S++ D
Sbjct: 55 GYRSRAAYKLIEMNERYKFLKKGQKIIDLGAAPGGWCQVAQRIVGSSDEKPSVVGIDYLP 114
Query: 245 VLKHPSTTV 253
V+ P +
Sbjct: 115 VVPLPGVIM 123
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P +G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTIGHRQT-DYLRTIYLCEVAADFALSVLKSGGHFLVKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
KQ F+ VH KP ASR ES E++++ + A
Sbjct: 203 TTLKQNFKTVHHVKPPASRTESVELYLLALEFKA 236
>gi|82596865|ref|XP_726438.1| cell division protein FtsJ [Plasmodium yoelii yoelii 17XNL]
gi|23481849|gb|EAA18003.1| FtsJ cell division protein [Plasmodium yoelii yoelii]
Length = 125
Score = 65.5 bits (158), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM-MASSIIHFDDESVLK 247
GYR+R+AFKLIQ+ +K+ + + + +DLCAAPGGW+QVA +NM S+II D + K
Sbjct: 23 GYRARSAFKLIQIAKKYNIFKNANILIDLCAAPGGWLQVAYKNMNKNSTIIGVDLVPIRK 82
Query: 248 HPSTTVEIQ------ECCKDIR 263
+ + I+ EC + I+
Sbjct: 83 IDNNVITIKSDITSSECIRKIK 104
>gi|340516592|gb|EGR46840.1| Hypothetical protein TRIREDRAFT_65615 [Trichoderma reesei QM6a]
Length = 396
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ L
Sbjct: 192 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDVLYAQ 251
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 252 LKIFFEKVIVAKPRSSRASSVEAFIVCLNFRPPAGFRASLEEP 294
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFSNVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|237841293|ref|XP_002369944.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii ME49]
gi|211967608|gb|EEB02804.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii ME49]
Length = 342
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCC-LTLGALKLASGILKEGGWFVTKVF 70
A+ EL K DVVL D +P + D + C L L A L +LK GG FVTK+F
Sbjct: 220 ALLEELGESKADVVLSDMAPAC-IGVKQDDHLNCAELCLFASDLMEQVLKLGGTFVTKMF 278
Query: 71 RSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+ + + F++V S KP+A R+ES E++ VCQH++ +L
Sbjct: 279 MGSETNNFKVYLRTRFKKVSSAKPRACRQESREMYFVCQHFVGRDRL 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 191 RSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
RSRAAFKL QL+ F F +K++V VDL A PGGW QVA + A
Sbjct: 141 RSRAAFKLEQLDDDFLFFRKNQVVVDLGAYPGGWSQVALDRIRAGG 186
>gi|347819407|ref|ZP_08872841.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 229
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D + R + + L VDVV+ D +PN+ DA L AL A LK
Sbjct: 106 DFRAPEMRERLEQALNGRGVDVVVSDMAPNLSGIGSADAARMAQLVELALDFACKHLKPE 165
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAK 116
G V K+F Y+ L+ +F+Q FQRV KP+ASR +SAE F+V + + P K
Sbjct: 166 GALVAKLFHGSGYSDLVSLFQQTFQRVKPFKPKASRGKSAETFLVGRG-LGPGK 218
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV 245
GYR+RAA+KL +++ + ++ VDL PG W Q ++ M A + D +
Sbjct: 31 GYRARAAYKLQEMDEQLGLIRPGYTVVDLGCTPGAWSQYLRRRMAAGAAGPLDGTII 87
>gi|71403252|ref|XP_804446.1| ribosomal RNA methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70867422|gb|EAN82595.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 296
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ DG+P+V D Y Q L L AL + + +L+ GG FVTK+FR + L+
Sbjct: 174 KADLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRCGGTFVTKIFRGPNTPFLVA 233
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ F+ V KP++SR S E F+VCQ Y PA F P
Sbjct: 234 KSEVFFRHVIIAKPRSSRNASMEAFMVCQDYQPPAGYRPSFDRP 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
GYR+R+A+KL+QL+ +F L + + VDLCAAPG W Q+ +++
Sbjct: 20 GYRARSAYKLLQLHEEFNILNRDDIQTGVVDLCAAPGSWSQLLARHL 66
>gi|302895811|ref|XP_003046786.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727713|gb|EEU41073.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 168 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 227
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGAEDGKLNAL 141
K F++V KP++SR S E F+VC ++ P +P LG G+L +
Sbjct: 228 LKIFFEKVIVAKPRSSRASSVEAFIVCINFQPPPGFRASLEEP------LGV-GGRLEEM 280
Query: 142 KKKQ 145
K+Q
Sbjct: 281 LKEQ 284
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFSNVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|452989595|gb|EME89350.1| hypothetical protein MYCFIDRAFT_27154 [Pseudocercospora fijiensis
CIRAD86]
Length = 370
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG F+ K FR KD ++L+
Sbjct: 160 VDLVISDGAPDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFIAKTFRGKDNDNILYA 219
Query: 82 -FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKEL 131
K +F+ V KP++SR S E F+VC ++ P +P ++L
Sbjct: 220 QLKTVFEGVTVAKPRSSRASSVEAFIVCTNFRPPEGFKASLDNPLGTTRQL 270
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRILI 64
>gi|340938991|gb|EGS19613.1| methyltransferase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 417
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 187 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQ 246
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V+ KP++SR S E F+VC ++ PA +P
Sbjct: 247 LKIFFEKVYVAKPRSSRASSVESFIVCINFQPPAGFKASLEEP 289
>gi|336466286|gb|EGO54451.1| uridine-2'-O--methyltransferase TRM7 [Neurospora tetrasperma FGSC
2508]
gi|350286852|gb|EGZ68099.1| uridine-2'-O--methyltransferase TRM7 [Neurospora tetrasperma FGSC
2509]
Length = 387
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 169 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQ 228
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V+ KP++SR S E F+VC ++ P +P
Sbjct: 229 LKVFFEKVYVAKPRSSRASSVEAFIVCINFQPPEGFTANLEEP 271
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|380489693|emb|CCF36530.1| FtsJ-like methyltransferase [Colletotrichum higginsianum]
Length = 404
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%)
Query: 19 TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSL 78
T +VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 169 TDRVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLL 228
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F+ V KP++SR S E F+VC ++ PA +P
Sbjct: 229 YAQLKIFFETVIVAKPRSSRASSVEAFIVCINFQPPAGFQASLENP 274
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFANVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|85086230|ref|XP_957655.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Neurospora crassa
OR74A]
gi|28918749|gb|EAA28419.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Neurospora crassa
OR74A]
Length = 387
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 169 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQ 228
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V+ KP++SR S E F+VC ++ P +P
Sbjct: 229 LKVFFEKVYVAKPRSSRASSVEAFIVCINFQPPEGFTANLEEP 271
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|410635152|ref|ZP_11345770.1| ribosomal RNA large subunit methyltransferase E [Glaciecola
lipolytica E3]
gi|410145339|dbj|GAC12975.1| ribosomal RNA large subunit methyltransferase E [Glaciecola
lipolytica E3]
Length = 206
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T + I EL KVDVV+ D +PN+ D Y L AL +A +LK G
Sbjct: 96 DFTEESVYDQIVAELDNEKVDVVVSDMAPNISGVNATDQYSSMYLVELALDMARNVLKPG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F KVF+ Y L + F +V KP ASR S E+++V + +
Sbjct: 156 GNFCAKVFQGVGYEEYLKDVRSSFNKVVIRKPDASRPRSREVYIVAKGF 204
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA------KQNMMASSIIHFD 241
GYRSRA++KLI++N K + ++ + +DL +APGGW Q+ K ++AS I+ D
Sbjct: 27 GYRSRASYKLIEINEKDKLIRPGNIVMDLGSAPGGWSQIVAPMVGKKGRVIASDILPMD 85
>gi|355572364|ref|ZP_09043508.1| Ribosomal RNA large subunit methyltransferase E [Methanolinea tarda
NOBI-1]
gi|354824738|gb|EHF08980.1| Ribosomal RNA large subunit methyltransferase E [Methanolinea tarda
NOBI-1]
Length = 202
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ DIT + R+ L T V++VL D SP + N YD L L A +LK
Sbjct: 83 VGDITDPRMRMEARSILGT--VNIVLSDASPKLSGNRSYDQARAIGLGEDVLSFACAVLK 140
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI 112
GG + K F+ +D++ LL +Q F V + + +ASRK S+EI+++ ++++
Sbjct: 141 PGGNLLMKSFQGEDFSGLLDDVRQHFLSVKTFRSRASRKGSSEIYIIARNFV 192
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+KL ++ +F ++ + +DL AAPG W+QV +
Sbjct: 18 GYRSRAAYKLKEIQERFHLIRDTDNVLDLGAAPGSWLQVTRS 59
>gi|322699567|gb|EFY91328.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Metarhizium acridum
CQMa 102]
Length = 430
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 192 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 251
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F+RV KP++SR S E F+VC ++ P +P
Sbjct: 252 LKIFFERVVVAKPRSSRASSMEAFIVCLNFRPPMGFHASLEEP 294
>gi|336262103|ref|XP_003345837.1| hypothetical protein SMAC_07121 [Sordaria macrospora k-hell]
gi|380088611|emb|CCC13497.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 328
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 19 TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSL 78
+ VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 126 SHPVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLL 185
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F++V+ KP++SR S E F+VC ++ P
Sbjct: 186 YAQLKVFFEKVYVAKPRSSRASSVEAFIVCINFQPP 221
>gi|440492017|gb|ELQ74619.1| SAM-dependent methyltransferase/cell division protein FtsJ
[Trachipleistophora hominis]
Length = 249
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 2 EDITTDKC------RIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLA 55
+DIT+D C + + + K D+VL DG+ N D + Q + ALKLA
Sbjct: 71 DDITSDSCVKSVLEHVHLLNNSENAKADLVLCDGASNTSGMLDVDVHVQHSILQAALKLA 130
Query: 56 SGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
I K FV K++R+ D ++L F ++++RV KP+ SR +S E FV+
Sbjct: 131 EKISKVCSTFVGKLYRNGDIGTVLRQFSEVYERVELVKPKCSRSQSIECFVI 182
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
GYR+R+A+K+ Q++ ++ L + +DLCAAPGGW Q+ + + +I D +++L
Sbjct: 6 GYRARSAYKIQQIDEHYKILHGNTTVIDLCAAPGGWTQIIAEK--CTKVIAVDIQTIL 61
>gi|329115331|ref|ZP_08244085.1| Ribosomal RNA large subunit methyltransferase E [Acetobacter
pomorum DM001]
gi|326695310|gb|EGE46997.1| Ribosomal RNA large subunit methyltransferase E [Acetobacter
pomorum DM001]
Length = 263
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ D +PN + D L AL A IL EGG FV KVF+ ++L
Sbjct: 163 KADLVVSDMAPNTTGHAPTDHVRIIGLAEEALHFAFDILAEGGGFVAKVFQGGSEKAMLN 222
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
KQ F +V KP ASRK+S+E++VV +
Sbjct: 223 TMKQAFTQVRHAKPPASRKDSSELYVVATGF 253
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRAAFKLI+L+ +F ++ VDL AAPGGW QV + A+ ++ D V
Sbjct: 78 QGWRSRAAFKLIELDDRFHLIRPGMRIVDLGAAPGGWTQVLVKR-GAAQVVGVDLLPV-- 134
Query: 248 HPSTTVEIQE 257
P T EI E
Sbjct: 135 EPVTGAEIIE 144
>gi|406979651|gb|EKE01397.1| ribosomal RNA large subunit methyltransferase J [uncultured
bacterium]
Length = 209
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T D + L K+DVVL D +PN+ V D L AL A LK G
Sbjct: 96 DFTQDDVVKDLHARLNGEKIDVVLSDMAPNLSGLSVVDQSRSINLVEIALAFAQKGLKPG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAK 116
G F+TK+F+ + + + + F V KP ASR S EIF++ + + AP K
Sbjct: 156 GVFLTKIFQGAGFENFVKNLRHSFGEVKVIKPDASRARSKEIFLLARDFGAPKK 209
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
G+R+R+ +KL ++ +++ ++ + VDL AAPGGW + A Q
Sbjct: 27 GFRARSVYKLSEIQERYKIIKPNMFVVDLGAAPGGWSEYAVQ 68
>gi|367029789|ref|XP_003664178.1| hypothetical protein MYCTH_2306706 [Myceliophthora thermophila ATCC
42464]
gi|347011448|gb|AEO58933.1| hypothetical protein MYCTH_2306706 [Myceliophthora thermophila ATCC
42464]
Length = 402
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 172 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQ 231
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V+ KP++SR S E F+VC ++ P +P
Sbjct: 232 LKIFFEKVYVAKPRSSRASSVEAFIVCINFRPPKGFKASLAEP 274
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|398383744|ref|ZP_10541807.1| 23S rRNA methylase [Sphingobium sp. AP49]
gi|427408984|ref|ZP_18899186.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
yanoikuyae ATCC 51230]
gi|397724189|gb|EJK84664.1| 23S rRNA methylase [Sphingobium sp. AP49]
gi|425713294|gb|EKU76308.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
yanoikuyae ATCC 51230]
Length = 224
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLI+L+ KF F++ S+ VDL APGGW QV ++ ++++ D V
Sbjct: 41 GWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVIRKMAPKAAVVGIDLLPVDPI 100
Query: 249 PSTTV 253
P T+
Sbjct: 101 PGVTL 105
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
M+D D R A+ +E D+V+ D + N + D L A A L+
Sbjct: 111 MDDKAPDLLREALGQE-----PDLVISDMAANTVGHAQTDHLRTMGLVEAAADFAVQNLR 165
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+GG FV KVF LL + K+ F + KP ASRK S E +VV Q +
Sbjct: 166 KGGTFVAKVFAGGTDAELLAVLKKHFTTIKHAKPPASRKGSVEWYVVAQGF 216
>gi|381200990|ref|ZP_09908121.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
yanoikuyae XLDN2-5]
Length = 214
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+RSRAAFKLI+L+ KF F++ S+ VDL APGGW QV ++ ++++ D V
Sbjct: 31 GWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVIRKMAPKAAVVGIDLLPVDPI 90
Query: 249 PSTTV 253
P T+
Sbjct: 91 PGVTL 95
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
M+D D R A+ +E D+V+ D + N + D L A A L+
Sbjct: 101 MDDKAPDLLREALGQE-----PDLVISDMAANTVGHAQTDHLRTMGLVEAAADFAVQNLR 155
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+GG FV KVF LL + K+ F + KP ASRK S E +VV Q +
Sbjct: 156 KGGTFVAKVFAGGTDAELLAVLKKHFTTIKHAKPPASRKGSVEWYVVAQGF 206
>gi|339021231|ref|ZP_08645339.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter tropicalis NBRC 101654]
gi|338751669|dbj|GAA08643.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter tropicalis NBRC 101654]
Length = 265
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+VL D +PN + D L AL A IL EGG FV KVF+ +L
Sbjct: 164 KADLVLSDMAPNTTGHGPTDHMRIIGLAQEALYFAFEILAEGGGFVAKVFQGGSEKEMLD 223
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
KQ F +V KP ASRK+S+E++VV +
Sbjct: 224 TLKQAFTQVRHAKPPASRKDSSELYVVATGF 254
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
+G+RSRAAFKLI+L+ +F ++ VDL AAPGGW QV
Sbjct: 79 QGWRSRAAFKLIELDDRFHLIKPGMRVVDLGAAPGGWTQV 118
>gi|195390727|ref|XP_002054019.1| GJ23026 [Drosophila virilis]
gi|194152105|gb|EDW67539.1| GJ23026 [Drosophila virilis]
Length = 313
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + L
Sbjct: 119 KAQLVVCDGAPDVTGVHEMDEYMQNQLIVSALSIATFVLETGGTFVAKIFKGNANSLLES 178
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
F+ H KP +SR S E FVVC + P + +P
Sbjct: 179 QMLTFFENFHIYKPPSSRPSSIEAFVVCTGFRLPIGYIPQIINP 222
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDE 243
+G+R+R+AFKL+ +N +F L + VDLCAAPG W QV + + S + DDE
Sbjct: 19 EGWRARSAFKLMHINEQFGILNDVRRAVDLCAAPGSWSQVLSRKLFDSCLT--DDE 72
>gi|15791077|ref|NP_280901.1| hypothetical protein VNG2263G [Halobacterium sp. NRC-1]
gi|169236828|ref|YP_001690028.1| 23S rRNA methyltransferase [Halobacterium salinarum R1]
gi|74568838|sp|Q9HN40.1|RLME_HALSA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703307|sp|B0R7G3.1|RLME_HALS3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|10581676|gb|AAG20381.1| cell division protein [Halobacterium sp. NRC-1]
gi|167727894|emb|CAP14682.1| 23S rRNA (uridine-2'-O-) methyltransferase [Halobacterium salinarum
R1]
Length = 259
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLG--ALKLASGILK 60
D+T D+ R + R+ DVV+ D +P+ M YD H + L AL+ A +L
Sbjct: 88 DMTEDETRQRV-RDAANGSADVVVSDMAPD--MTGEYDLDHARSVHLARQALETARELLD 144
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQ-HYIAP 114
GG FV KVF +D+ LL + F V + P ASR S+E++VV + H +AP
Sbjct: 145 AGGHFVVKVFDGRDFQDLLADIEDEFAFVATHSPDASRDASSELYVVGKNHIVAP 199
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESVL 246
+GYRSRAA+KL QL+ +F+ L VDL AAPGGW+QVA + A ++ D +S+
Sbjct: 15 EGYRSRAAYKLQQLDDRFDVLFGGASVVDLGAAPGGWLQVAAERAGARGKVVGVDFQSIT 74
Query: 247 K 247
+
Sbjct: 75 Q 75
>gi|389592746|ref|XP_003721644.1| putative FtsJ-like methyltransferase [Leishmania major strain
Friedlin]
gi|321438176|emb|CBZ11928.1| putative FtsJ-like methyltransferase [Leishmania major strain
Friedlin]
Length = 459
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+VL DG+P+V D Y Q L L AL + + +L+ GG F+TK+FR + L+
Sbjct: 163 KADIVLCDGAPDVTGMHELDEYLQHHLLLAALHITTFVLRAGGCFLTKIFRGPNTAFLVA 222
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
+ FQ+V KP++SR S E F++CQ + P +F
Sbjct: 223 KSQLFFQQVRVVKPKSSRNASMESFLLCQGFRMPLGYVPRF 263
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL+Q++ +F L +++ VDLCAAPG W QV Q+
Sbjct: 19 EGYRARSAYKLLQIHEEFNILDPAEIRTGAVDLCAAPGSWSQVLAQHF 66
>gi|303256870|ref|ZP_07342884.1| ribosomal RNA large subunit methyltransferase J [Burkholderiales
bacterium 1_1_47]
gi|330998881|ref|ZP_08322608.1| ribosomal RNA large subunit methyltransferase J [Parasutterella
excrementihominis YIT 11859]
gi|302860361|gb|EFL83438.1| ribosomal RNA large subunit methyltransferase J [Burkholderiales
bacterium 1_1_47]
gi|329576095|gb|EGG57614.1| ribosomal RNA large subunit methyltransferase J [Parasutterella
excrementihominis YIT 11859]
Length = 214
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 13 ITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRS 72
+T L+ KVDVVL D +PN+ DA L AL A LK+ G FV KVF+
Sbjct: 115 LTDLLEGEKVDVVLSDMAPNLSGVAAADAARCLLLNELALDFAKENLKKNGSFVCKVFQG 174
Query: 73 KDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQ 109
Y+ + K+ F++V KP+ASR SAE+++V +
Sbjct: 175 SGYSQYVEACKKTFRKVSVRKPEASRSSSAEVYIVAR 211
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 165 LPVSKFIEHETPTVLLQHATE------VGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLC 218
+PVS+ P + +H T+ V +GYR+R+ +KL++++ K + ++ VDL
Sbjct: 1 MPVSEKKLRSNPAWIKRHLTDPFVKKSVQEGYRARSVYKLMEIDDKDKIIKPGMSVVDLG 60
Query: 219 AAPGGWMQVAKQNM 232
AAPG W Q+ K+ +
Sbjct: 61 AAPGSWTQIVKERL 74
>gi|116202349|ref|XP_001226986.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177577|gb|EAQ85045.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 399
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 170 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQ 229
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F++V+ KP++SR S E F+VC ++ P
Sbjct: 230 LKIFFEKVYVAKPRSSRASSVEAFIVCINFQPP 262
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFEDVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|402081835|gb|EJT76980.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 412
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +L+ GG FV K+FR ++ L
Sbjct: 179 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDLLYAQ 238
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F RV KP++SR S E F+VC + PA +P
Sbjct: 239 LKLFFCRVVVAKPRSSRASSVEAFIVCMGFRPPAGFRASLDEP 281
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFDNVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|145589197|ref|YP_001155794.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|189040319|sp|A4SXL6.1|RLME_POLSQ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|145047603|gb|ABP34230.1| 23S rRNA Um-2552 2'-O-methyltransferase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 224
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVD+VL D +PN+ V D+ L AL A+ LK G + K F Y+ ++
Sbjct: 130 KVDLVLSDMAPNLSGVGVADSARMAFLAEIALDFATAHLKPEGALLIKCFNGSGYSQIVE 189
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
FK++F+ V S KP+ASR +S+EIF++ ++ P
Sbjct: 190 SFKKVFKTVASRKPKASRAKSSEIFLLGKNLKPP 223
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+RA +KL +++ + ++ VDL +APG W Q + +
Sbjct: 27 GYRARAVYKLSEIDEQDHLIKAGMTIVDLGSAPGSWSQYVRNRL 70
>gi|429966197|gb|ELA48194.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vavraia culicis
'floridensis']
Length = 259
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 2 EDITTDKCRIAITREL------KTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLA 55
EDIT++ C + + + + K D+VL DG+ N+ D + Q + ALKLA
Sbjct: 85 EDITSNSCTELVLKSVHFLNNNENAKADLVLCDGASNISGMPDVDVHVQHSILCSALKLA 144
Query: 56 SGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
I + G FV K++R D +++L F ++++ V KP+ SR S E FVV
Sbjct: 145 GKISRAGSTFVGKLYRDGDVSTVLKRFLEVYEHVELAKPKCSRSLSIECFVV 196
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVL 246
YR+R+A+K+ Q++ ++ L + VDLCAAPGGW QV + + ++ D + +L
Sbjct: 21 YRARSAYKIKQIDEHYKILHGNTTVVDLCAAPGGWTQVVAEK--CAKVVAVDIQDIL 75
>gi|414343696|ref|YP_006985217.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans H24]
gi|411029031|gb|AFW02286.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans H24]
Length = 266
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
+E+ D+V+ D +PN + D L GAL A +L EGG FV KVF+
Sbjct: 161 KEILGGPADLVMSDMAPNTTGHAATDHMRIMGLAEGALDFAMQVLAEGGSFVAKVFQGGS 220
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+L K F V KP ASRKES+E++V+ +
Sbjct: 221 EKQMLDSMKLAFASVKHVKPPASRKESSELYVIASGF 257
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKLI+++ +F ++ +DL AAPGGW QVA
Sbjct: 82 QGWRSRAAFKLIEIDDRFHIIKPGARVIDLGAAPGGWSQVA 122
>gi|325187807|emb|CCA22351.1| ribosomal RNA large subunit methyltransferase J puta [Albugo
laibachii Nc14]
Length = 233
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
M D R I + L+ VDVVL D +P +++ D+ Q L AL +A LK
Sbjct: 118 MGDFRDSSTRNEIGQLLEGRMVDVVLSDMAPRFTGHFLKDSQQQLRLCYNALLMAELYLK 177
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
GG FVTKV +S+D K F+ V KP +SR ES E+F + + Y
Sbjct: 178 VGGNFVTKVLQSEDLEDFRGQMKTQFKSVKGYKPSSSRSESTELFFIGKEY 228
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 191 RSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
RSRAAFKL LN+KF+ ++ +DL AAPGGW Q+A
Sbjct: 48 RSRAAFKLRDLNKKFDIIRHGDTVLDLGAAPGGWTQIA 85
>gi|70929691|ref|XP_736867.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511773|emb|CAH84861.1| hypothetical protein PC301269.00.0 [Plasmodium chabaudi chabaudi]
Length = 231
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 47 LTLGALKLASGILKEGGWFVTKVFRSKDYTSLL-WIFKQLFQRVHSTKPQASRKESAEIF 105
L L +LK+ +LK GG F++K+FR +YT LL + + F++++ KPQ+SR +S E F
Sbjct: 2 LILSSLKVCCSVLKVGGNFISKIFRG-EYTGLLIFHLNKFFEKIYVCKPQSSRNKSLESF 60
Query: 106 VVCQHYIAPAKLDTKFF 122
+VC ++ P T F
Sbjct: 61 LVCLNFGLPKSAITSLF 77
>gi|410943380|ref|ZP_11375121.1| 23S rRNA methyltransferase J [Gluconobacter frateurii NBRC 101659]
Length = 266
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
+E+ D+V+ D +PN + D L GAL A +L EGG FV KVF+
Sbjct: 161 KEILGGPADLVMSDMAPNTTGHAATDHMRIMGLAEGALDFAMQVLAEGGSFVAKVFQGGS 220
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+L K F V KP ASRKES+E++V+ +
Sbjct: 221 EKQMLDSMKLAFASVKHVKPPASRKESSELYVIATGF 257
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKLI+++ +F ++ +DL AAPGGW QVA
Sbjct: 82 QGWRSRAAFKLIEIDDRFHIIKPGARVIDLGAAPGGWSQVA 122
>gi|357031417|ref|ZP_09093360.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
morbifer G707]
gi|356414647|gb|EHH68291.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
morbifer G707]
Length = 272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D+V+ D +PN + D L GAL A +L EGG FV KVF+ +L
Sbjct: 168 ADLVMSDMAPNTTGHAATDHMRIMGLAEGALDFAFQVLAEGGGFVAKVFQGGSEKRMLDA 227
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K F+ V KP ASRKES+E++V+ +
Sbjct: 228 MKLAFETVRHVKPPASRKESSELYVIATGF 257
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKLI+++ +F + +DL AAPGGW QVA
Sbjct: 82 QGWRSRAAFKLIEIDDRFHLIHPGTRIIDLGAAPGGWTQVA 122
>gi|429962346|gb|ELA41890.1| 23S rRNA (uridine(2552)-2'-O-)-methyltransferase [Vittaforma
corneae ATCC 50505]
Length = 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
EDIT+ +C I K D+++ DG+P+V D + Q L AL + + LK
Sbjct: 86 EDITSGECLNKIFEVFDGEKADLIVCDGAPDVTGFHDLDEFLQLDLLKSALHICTKTLKT 145
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVC 108
G FV K FR ++ F + F RV KP+ASR S E F+VC
Sbjct: 146 GSNFVGKCFRGAYSGYIVHHFLKFFDRVDLVKPRASRHVSIECFLVC 192
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
GYR+R+AFKL+ +N + L+ + +DLCAAPG W QV + A
Sbjct: 20 GYRARSAFKLLDINEAYRILESASKVIDLCAAPGSWSQVLASHTKA 65
>gi|163797468|ref|ZP_02191419.1| 23S rRNA methylase [alpha proteobacterium BAL199]
gi|159177217|gb|EDP61776.1| 23S rRNA methylase [alpha proteobacterium BAL199]
Length = 251
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAAFKLIQLN +F FL+ VDL AAPGGW Q++
Sbjct: 66 GYRSRAAFKLIQLNERFNFLRPGARVVDLGAAPGGWTQIS 105
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VDVVL D + + D L A + A +L G FV KVF+ T++L
Sbjct: 155 VDVVLSDMAAQTTGHPQTDHLRIVGLCEAAFEFALEVLAPEGTFVAKVFQGGSETAMLAR 214
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F+ V KP ASR ESAE +VV +
Sbjct: 215 MKRAFKAVRHAKPPASRAESAETYVVATGF 244
>gi|400597753|gb|EJP65477.1| FtsJ-like methyltransferase [Beauveria bassiana ARSEF 2860]
Length = 403
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 58/114 (50%)
Query: 19 TWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSL 78
T VD+VL DG+P+V D Y Q L AL LA +L+ GG FV K+FR + L
Sbjct: 169 TNPVDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRGVDVL 228
Query: 79 LWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELG 132
K F++V KP++SR S E F+VC ++ P +P + LG
Sbjct: 229 YAQLKIFFEKVVVAKPRSSRASSVEAFIVCINFRPPPGFRASLEEPLGVGERLG 282
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFANVSRVVDLCAAPGSWSQVLSRVLI 64
>gi|385804992|ref|YP_005841392.1| ribosomal RNA large subunit methyltransferase J [Haloquadratum
walsbyi C23]
gi|339730484|emb|CCC41824.1| 23S rRNA (uridine-2'-O-) methyltransferase [Haloquadratum walsbyi
C23]
Length = 256
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T + + A+ + + VDVVL D +PN+ + D L A +A+ IL G
Sbjct: 86 DMTDESTKNALRKRVNNSSVDVVLSDMAPNMTGEYSVDHARSIHLARQAFSVATDILPAG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-AP 114
G F+ KVF +D F+ V S +P ASR S+E ++V +H I AP
Sbjct: 146 GDFIVKVFDGRDLADFRQDVDTEFEYVKSIRPDASRDSSSEQYLVGKHRITAP 198
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+A+KL Q++ +DL AAPGGW+QVA + + S +
Sbjct: 14 EGYRTRSAYKLQQIDADAGVFGPGNTVIDLGAAPGGWLQVAAEAVGPSGTV 64
>gi|407784103|ref|ZP_11131288.1| 23S rRNA methylase [Oceanibaculum indicum P24]
gi|407198352|gb|EKE68389.1| 23S rRNA methylase [Oceanibaculum indicum P24]
Length = 231
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAAFK+ QL+ KF F + +K VDL AAPGGW QVA + ++I+ D
Sbjct: 47 GYRSRAAFKIAQLDDKFGFFKGAKRIVDLGAAPGGWTQVAVERAPNATIVALD 99
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+VL D +P + D L AL A +L GG F+ KVF+ +LL
Sbjct: 132 KADLVLSDMAPPTTGHTKTDHLRIMGLCEIALAFAEEVLAPGGTFLCKVFQGGTEGALLN 191
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K F V KP ASR +SAE++V+ +
Sbjct: 192 RMKLCFATVKHAKPPASRSDSAELYVIASGF 222
>gi|269860030|ref|XP_002649738.1| tRNA (Gm34, Gm37) 2'-O-methyltransferase [Enterocytozoon bieneusi
H348]
gi|220066797|gb|EED44268.1| tRNA (Gm34, Gm37) 2'-O-methyltransferase [Enterocytozoon bieneusi
H348]
Length = 264
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 2 EDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKE 61
+DIT ++ ++L +++ V+ DG+P+V + D Y Q L +LK+ + +
Sbjct: 92 DDITNEQ----FIKKLSNMQINRVICDGAPDVTGFYELDLYAQIDLLKASLKITLHVCND 147
Query: 62 GG--WFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQ 109
F++K+FR K ++ FKQ FQ V TKP+ASR S E F+VC+
Sbjct: 148 YNNVIFISKLFRGKYTKYIIHYFKQYFQEVILTKPRASRSTSNEAFIVCK 197
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCV-DLCAAPGGWMQ 226
YR+R+ FKL Q++ K+ + + V DLCAAPG W Q
Sbjct: 19 NNYRARSIFKLKQIDEKYNVFNDTDINVLDLCAAPGSWSQ 58
>gi|346323696|gb|EGX93294.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Cordyceps militaris
CM01]
Length = 415
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 180 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 239
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDPKYAFKELGA 133
K F++V KP++SR S E F+VC + P +P LG
Sbjct: 240 LKLFFRKVVVAKPRSSRASSVEAFIVCVDFRPPPGFCASLEEPLGVGPRLGG 291
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFADVSRVVDLCAAPGSWSQVLSRVLI 64
>gi|453331116|dbj|GAC86695.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
thailandicus NBRC 3255]
Length = 266
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
+E+ D+V+ D +PN + D L GAL A +L EGG FV KVF+
Sbjct: 161 KEILGGPADLVMSDMAPNTTGHAATDHMRIMGLAEGALDFAMQVLAEGGSFVAKVFQGGS 220
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+L K F V KP ASRKES+E++V+ +
Sbjct: 221 EKQMLDSMKLAFASVKHVKPPASRKESSELYVIATGF 257
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKLI+++ +F ++ +DL AAPGGW QVA
Sbjct: 82 QGWRSRAAFKLIEIDDRFHIIKPGARVIDLGAAPGGWSQVA 122
>gi|319942668|ref|ZP_08016975.1| ribosomal RNA large subunit methyltransferase E [Sutterella
wadsworthensis 3_1_45B]
gi|319803751|gb|EFW00686.1| ribosomal RNA large subunit methyltransferase E [Sutterella
wadsworthensis 3_1_45B]
Length = 217
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVDVVL D +PN+ DA L AL+ L G FVTK F+ Y+ +
Sbjct: 123 KVDVVLSDMAPNLSGIAAADAARSLLLNELALEFCLEHLAPNGVFVTKAFQGSGYSQYVE 182
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K++F++V + KP+ASR SAE+++V + AP
Sbjct: 183 SLKRVFKKVAAKKPEASRDTSAEVYLVSRGLKAP 216
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+ +KLI+L+ K L+ VDL +APG W QV ++ +
Sbjct: 31 GYRARSVYKLIELDEKEHLLKPGSTVVDLGSAPGSWTQVVRERL 74
>gi|332255476|ref|XP_003276857.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase 1 [Nomascus leucogenys]
Length = 329
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 54/112 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + K D+V+ DG+P+ L L AL +A+ +LK G
Sbjct: 91 DITQLSTAKEIIQHFKGCPADLVVCDGAPDGKXQQKVGGQAGAPLLLAALNIATHVLKPG 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV K+FR +D T L + F V KP++SR S E F VCQ Y P
Sbjct: 151 GCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQGYDPP 202
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---IIHFDDESV 245
G+R+R+AFKL+QL+++F+ Q VDLCAAPG W QV Q + ++ D +++
Sbjct: 20 GWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGQGSGHVVAVDLQAM 79
Query: 246 LKHPSTTVEIQ 256
P V+IQ
Sbjct: 80 APLPG-VVQIQ 89
>gi|166796476|gb|AAI59356.1| LOC100145257 protein [Xenopus (Silurana) tropicalis]
Length = 270
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 48/62 (77%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
++ EYRK++ E+N RPI+KV EAKARKK+R ++M+++KKK E ++ D+S+ EKA +
Sbjct: 154 MMEEYRKQQRELNARPIKKVAEAKARKKRRTLKKMEQIKKKAEAVVNTSDISEREKAAQL 213
Query: 539 RA 540
R+
Sbjct: 214 RS 215
>gi|94496284|ref|ZP_01302862.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. SKA58]
gi|94424463|gb|EAT09486.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. SKA58]
Length = 224
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRAAFKLI+L+ KF F++ S+ VDL APGGW QV ++ ++++ D
Sbjct: 41 GWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVVRKMAPKAAVVGID 93
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
M+D D R A+ +E D+V+ D + N + D L A + A L+
Sbjct: 111 MDDKAPDLLREALGQE-----PDLVISDMAANTVGHAPTDHLRTMGLVEAAAQFAVENLR 165
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+GG FV KVF LL + K+ F + KP ASRK S E +VV Q +
Sbjct: 166 KGGTFVAKVFAGGTDAQLLAVLKKHFTTIKHAKPPASRKGSVEWYVVAQGF 216
>gi|367040291|ref|XP_003650526.1| hypothetical protein THITE_158106 [Thielavia terrestris NRRL 8126]
gi|346997787|gb|AEO64190.1| hypothetical protein THITE_158106 [Thielavia terrestris NRRL 8126]
Length = 403
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 172 PVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYA 231
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F++V+ KP++SR S E F+VC ++ P
Sbjct: 232 QLKIFFEKVYVAKPRSSRASSVEAFIVCVNFQPP 265
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F + VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|68074943|ref|XP_679388.1| ribosomal RNA methyltransferase [Plasmodium berghei strain ANKA]
gi|56500124|emb|CAH98004.1| ribosomal RNA methyltransferase, putative [Plasmodium berghei]
Length = 253
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
LK K+D++L D + N + D + C LTL + GG ++ K++
Sbjct: 136 LKDKKIDIILSDAAVACIGNKIDDHLNSCELTLSITNFMEQYINIGGVYIVKMYLGSQTN 195
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKL 117
+L K +FQ V++ KP+ASR ES EI++VC+++ K+
Sbjct: 196 NLKTYLKTIFQYVNTAKPKASRSESREIYLVCRNFTGRKKI 236
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAAFKLI+L+ K+ FL+K+K +D+ + PG W QV
Sbjct: 52 NYRSRAAFKLIELDNKYLFLKKNKTILDIGSYPGSWCQV 90
>gi|378822243|ref|ZP_09845052.1| ribosomal RNA large subunit methyltransferase J [Sutterella
parvirubra YIT 11816]
gi|378598935|gb|EHY32014.1| ribosomal RNA large subunit methyltransferase J [Sutterella
parvirubra YIT 11816]
Length = 217
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVDVVL D +PN+ DA L A + LK G FVTK F+ Y+ +
Sbjct: 123 KVDVVLSDMAPNLSGIAAADAARSLLLNELAHEFCLEHLKPTGVFVTKAFQGSGYSQFVE 182
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K+ F++V++ KP ASR SAE+++V + AP
Sbjct: 183 ALKKSFKKVYTRKPAASRDTSAEVYLVARELKAP 216
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
GYR+R+ +KL +L+ + L++ VDL AAPG W Q+ ++ +
Sbjct: 31 GYRARSVYKLTELDDREHLLRRGMTVVDLGAAPGSWTQIVRERL 74
>gi|395765708|ref|ZP_10446300.1| ribosomal RNA large subunit methyltransferase E [Bartonella sp.
DB5-6]
gi|395410903|gb|EJF77445.1| ribosomal RNA large subunit methyltransferase E [Bartonella sp.
DB5-6]
Length = 240
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFDDES 244
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA + + +S S++ D
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKVIDLGAAPGGWCQVAGRLVGSSNEKPSVVGIDYLP 114
Query: 245 VLKHPS-TTVEI 255
V P T+EI
Sbjct: 115 VDPLPGVVTLEI 126
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK G F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRRT-DHLRTVHLCEVAADFALSVLKPRGHFLAKAFQGGTENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ V+ KP +SR ES E++++
Sbjct: 203 TTLKQNFKTVYHVKPPSSRAESVELYLLA 231
>gi|322710895|gb|EFZ02469.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Metarhizium anisopliae
ARSEF 23]
Length = 417
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 176 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 235
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ P +P
Sbjct: 236 LKIFFEKVVVAKPRSSRASSMEAFIVCLNFRPPTGFHASLEEP 278
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFNLFANVSRVVDLCAAPGSWSQVLSRVLI 64
>gi|83316088|ref|XP_731073.1| cell division protein FtsJ [Plasmodium yoelii yoelii 17XNL]
gi|23490998|gb|EAA22638.1| FtsJ cell division protein, putative [Plasmodium yoelii yoelii]
Length = 258
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
LK K+D++L D + N + D + C LTL + GG ++ K++
Sbjct: 141 LKDKKIDIILSDAAVACIGNKIDDHLNSCELTLSITNFMEQYINIGGVYIVKMYLGSQTD 200
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLD 118
+L K +FQ V++ KP+ASR ES EI++VC+++ K++
Sbjct: 201 NLKTYLKTIFQYVNTAKPKASRSESREIYLVCRNFTGRKKIN 242
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
YRSRAAFKLI+L+ K+ FL+K+K +D+ + PG W QV
Sbjct: 57 NYRSRAAFKLIELDNKYLFLKKNKTILDIGSYPGSWCQV 95
>gi|374292556|ref|YP_005039591.1| Ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
lipoferum 4B]
gi|357424495|emb|CBS87374.1| Ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
lipoferum 4B]
Length = 238
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+GYRSRAAFKL+QL+ KF L K VDL AAPGGW Q+A
Sbjct: 48 RGYRSRAAFKLLQLDEKFRLLAPGKRVVDLGAAPGGWTQIA 88
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 22 VDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
D+VL D +P G D L A A +L GG FV K+F+ SLL
Sbjct: 139 ADLVLSDMAAPTTGHQQT-DHLRIMGLAEAAYDFAEEVLAPGGAFVAKLFQGGAERSLLD 197
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
++ F V KP ASR ES+E +VV +
Sbjct: 198 RLRRDFAVVKHAKPPASRAESSETYVVATGF 228
>gi|268571201|ref|XP_002648694.1| Hypothetical protein CBG25080 [Caenorhabditis briggsae]
Length = 238
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 106/182 (58%), Gaps = 15/182 (8%)
Query: 211 SKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKHPSTTVEIQECCKDIRVLGRKDV 270
SKV G++ + + +++I DD H TT E+ E KD++VLG +++
Sbjct: 30 SKVNASDFIKSSGYLDI----LGEANVILLDDPKWKNHEKTTEEVVEYMKDVKVLGPREL 85
Query: 271 RNLLKWWKVLHDEKTEKEKEEEKEGGEGEEEEKVVEDEMDEEEKELMKATKEIEEL---- 326
R LL+W K + + E E++ EGE ++ +E+++ EE+ E +A EI+EL
Sbjct: 86 RVLLRWRKSMLE-----TLEAERKAVEGEAQDVEIEEDLTEEQIE-DRAMAEIDELIAKA 139
Query: 327 KDEERRELKRKKKKVSKERTKLQEKMNLKMLLKGDLGPTENDDEEMFKLSQIRTTDQLDL 386
++E+ LK+KKKK+ K + ++ ++ LKM++ GD GP + +D+E+F+L +IR +L
Sbjct: 140 SEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGP-QAEDQEVFQLKKIRKAKELAE 198
Query: 387 IT 388
IT
Sbjct: 199 IT 200
>gi|448302198|ref|ZP_21492181.1| 23S rRNA methyltransferase J [Natronorubrum tibetense GA33]
gi|445581857|gb|ELY36205.1| 23S rRNA methyltransferase J [Natronorubrum tibetense GA33]
Length = 261
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T +K R + E KVD V+ D +PN+ + D L A + A +L G
Sbjct: 90 DMTEEKTRERVV-EAAGGKVDAVVSDMAPNMSGEYSLDQARSLYLARQAFETALELLDTG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-AP 114
G FV KVF D ++ FQ V T P+ASR+ES+EIF + + + AP
Sbjct: 149 GNFVVKVFEGPDVDEFRADVEEEFQYVRVTSPKASREESSEIFFIAKGRLTAP 201
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFDDESV- 245
+GYRSRAA+KL QL+ ++ VDL AAPGGW+QVA + + ++I D + +
Sbjct: 14 QGYRSRAAYKLKQLDDLENVIEGRDTVVDLGAAPGGWLQVAAEKVGPQGTVIGVDLQRIK 73
Query: 246 -LKHPSTTVEIQECCKDI 262
L+ P+ +++ D+
Sbjct: 74 DLEDPALVDQVETLRGDM 91
>gi|395778792|ref|ZP_10459304.1| ribosomal RNA large subunit methyltransferase E [Bartonella
elizabethae Re6043vi]
gi|423714894|ref|ZP_17689118.1| ribosomal RNA large subunit methyltransferase E [Bartonella
elizabethae F9251]
gi|395418000|gb|EJF84337.1| ribosomal RNA large subunit methyltransferase E [Bartonella
elizabethae Re6043vi]
gi|395430378|gb|EJF96420.1| ribosomal RNA large subunit methyltransferase E [Bartonella
elizabethae F9251]
Length = 240
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFD 241
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA++ + +S S++ D
Sbjct: 55 GYRSRAAYKLIEMNERYKFLKKGQKVIDLGAAPGGWCQVAERIVGSSDEKPSVVGID 111
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F++V+ KP ASR ES E++++
Sbjct: 203 ATLKQHFKKVYHVKPPASRSESVELYLLA 231
>gi|320169116|gb|EFW46015.1| ribosomal RNA large subunit methyltransferase J [Capsaspora
owczarzaki ATCC 30864]
Length = 317
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 13 ITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTL--GALKLASGILKEGGWFVTKVF 70
+T L T VDVVL D +P N H C+ L AL+ A+ L+ GWFV K F
Sbjct: 216 MTAILGTRLVDVVLSDMAPPASGN--AGVTHLQCVNLIEAALRFATRFLRIDGWFVCKSF 273
Query: 71 RSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
+ L ++ F+ VH KP A+R ES E + VC+ ++
Sbjct: 274 HGTEDQLLTTTLRRHFREVHFCKPPATRTESGEFYYVCEGFVG 316
>gi|401414278|ref|XP_003871637.1| putative FtsJ-like methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487855|emb|CBZ23099.1| putative FtsJ-like methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 454
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+VL DG+P+V D Y Q L L AL + + +L+ GG F+TK+FR + L+
Sbjct: 161 KADIVLCDGAPDVTGMHELDEYLQHHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLVA 220
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
+ FQ+V KP++SR S E F++CQ + P +F
Sbjct: 221 KSELFFQQVRVVKPKSSRNASMESFLLCQGFRMPLGYVPRF 261
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL+Q+N +F L +++ VDLCAAPG W QV Q+
Sbjct: 19 EGYRARSAYKLLQINEEFNILSPAEIRTGAVDLCAAPGSWSQVLAQHF 66
>gi|163867451|ref|YP_001608650.1| cell division protein ftsJ [Bartonella tribocorum CIP 105476]
gi|189044086|sp|A9IMA1.1|RLME_BART1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|161017097|emb|CAK00655.1| cell division protein ftsJ [Bartonella tribocorum CIP 105476]
Length = 242
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 40/48 (83%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA++ + +S+
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKVIDLGAAPGGWCQVAERIVGSSN 102
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
I KQ F++V+ KP ASR ES E++++
Sbjct: 203 AILKQHFKKVYHVKPPASRSESVELYLLA 231
>gi|423710960|ref|ZP_17685280.1| ribosomal RNA large subunit methyltransferase E [Bartonella
washoensis Sb944nv]
gi|395414874|gb|EJF81309.1| ribosomal RNA large subunit methyltransferase E [Bartonella
washoensis Sb944nv]
Length = 242
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFD 241
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA + + +S S++ D
Sbjct: 55 GYRSRAAYKLIEINERYQFLKKGQKIIDLGAAPGGWCQVAGRIVGSSDEKPSVVGID 111
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +L+ G F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLRPRGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 NKLKQNFKTVHHVKPPASRMESVELYLLA 231
>gi|407776100|ref|ZP_11123390.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thalassospira
profundimaris WP0211]
gi|407280959|gb|EKF06525.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thalassospira
profundimaris WP0211]
Length = 268
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAAFKLI++N +F+ LQ VDL AAPGGW QVA
Sbjct: 64 GYRSRAAFKLIEINNQFDLLQPGMRIVDLGAAPGGWTQVA 103
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD V+ D SP + D L AL A +L GG F+ KVF+ LL
Sbjct: 154 VDAVISDMSPETTGHRQTDHIRIIDLVEHALLFAEEVLAPGGIFIAKVFKGGTENELLDR 213
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F+ KP ASR ES E +++ +
Sbjct: 214 VKKNFRVTKHAKPPASRPESPEAYLIATGF 243
>gi|342876749|gb|EGU78307.1| hypothetical protein FOXB_11168 [Fusarium oxysporum Fo5176]
Length = 2118
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+VL DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 1914 VDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 1973
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ PA +P
Sbjct: 1974 LKIFFEKVIVAKPRSSRASSVEAFIVCINFQPPAGFRASLEEP 2016
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV
Sbjct: 1762 QGWRARSAFKLLQLDEEFDLFADVTRVVDLCAAPGSWSQV 1801
>gi|149028400|gb|EDL83785.1| rCG22889, isoform CRA_b [Rattus norvegicus]
Length = 187
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 51 ALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQH 110
AL +A+ +LK GG FV K+FR +D T L + F V KP++SR S E F VCQ
Sbjct: 2 ALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQG 61
Query: 111 YIAP----AKLDTKFFDPKYAFKEL 131
Y P L + Y F +L
Sbjct: 62 YDPPEGFIPDLTRPLMNHSYDFNQL 86
>gi|240849823|ref|YP_002971211.1| cell division protein FtsJ [Bartonella grahamii as4aup]
gi|240266946|gb|ACS50534.1| cell division protein FtsJ [Bartonella grahamii as4aup]
Length = 242
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
GYRSRAA+KLI++N ++ FL+K + +DL AAPGGW QVA++ + +S
Sbjct: 55 GYRSRAAYKLIEINERYRFLKKGQKVIDLGAAPGGWCQVAERIVGSS 101
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D SP G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMASPTTGHRQT-DHLRTIYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
I KQ F++V+ KP ASR ES E++++
Sbjct: 203 TILKQHFKKVYHVKPPASRSESVELYLLA 231
>gi|124486074|ref|YP_001030690.1| hypothetical protein Mlab_1254 [Methanocorpusculum labreanum Z]
gi|158512817|sp|A2SSW7.1|RLME_METLZ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|124363615|gb|ABN07423.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanocorpusculum
labreanum Z]
Length = 203
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
V+VV+ D SP++ YD L AL AS +LK+GG V K F+ D+ LL +
Sbjct: 102 VNVVVCDASPHLSGAKAYDQARVMGLNEEALNFASNLLKQGGNLVMKSFQGSDFNELLAL 161
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTK 120
K+ F V + A+R+ S E ++V +++I A D K
Sbjct: 162 VKEKFYSVRVIRSTATRRGSTECYIVAKNFIGDADDDRK 200
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
GYR+R+A+KLI +N +F ++++ VDL AAPG W+QV K
Sbjct: 18 GYRARSAYKLIDINERFNVIRQTDNVVDLGAAPGSWLQVLK 58
>gi|288941981|ref|YP_003444221.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Allochromatium vinosum
DSM 180]
gi|288897353|gb|ADC63189.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Allochromatium vinosum
DSM 180]
Length = 206
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+DVVL D +PN+ V D L AL+LA LK GG VTKVF+ + +
Sbjct: 115 LDVVLSDMAPNITGTMVVDQTRAMYLVELALELARSHLKPGGTLVTKVFQGTGFDDYMRE 174
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ F++V + KP++SR ES E+F+V + +
Sbjct: 175 LRSSFRQVATRKPKSSRTESREVFLVAKGF 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
GYRSRAA+KL+++ K L+ VDL AAPG W Q+A+Q + + D ++
Sbjct: 27 GYRSRAAYKLLEIQEKDPILKPGMRVVDLGAAPGSWSQIARQLVGPEGCVVALDILPMEP 86
Query: 249 PSTTVEIQECCKDIRVLGR 267
V +Q +D VL R
Sbjct: 87 LPGVVVLQGDFRDDEVLSR 105
>gi|146075540|ref|XP_001462727.1| putative FtsJ-like methyltransferase [Leishmania infantum JPCM5]
gi|398009463|ref|XP_003857931.1| FtsJ-like methyltransferase, putative [Leishmania donovani]
gi|134066806|emb|CAM65266.1| putative FtsJ-like methyltransferase [Leishmania infantum JPCM5]
gi|322496134|emb|CBZ31205.1| FtsJ-like methyltransferase, putative [Leishmania donovani]
Length = 457
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+VL DG+P+V D Y Q L L AL + + +L+ GG F+TK+FR + L+
Sbjct: 161 KADIVLCDGAPDVTGMHELDEYLQHHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLVA 220
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKF 121
FQ+V KP++SR S E F++CQ + P +F
Sbjct: 221 KSGLFFQQVRVVKPKSSRNASMESFLLCQGFRMPLGYVPRF 261
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 3/48 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL+Q++ +F L +++ VDLCAAPG W QV Q+
Sbjct: 19 EGYRARSAYKLLQIHEEFNILDPAEIRTGAVDLCAAPGSWSQVLAQHF 66
>gi|288958935|ref|YP_003449276.1| cell division protein methyltransferase [Azospirillum sp. B510]
gi|288911243|dbj|BAI72732.1| cell division protein methyltransferase [Azospirillum sp. B510]
Length = 235
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+GYRSRAAFKL+QL+ KF L K VDL AAPGGW Q+A
Sbjct: 48 RGYRSRAAFKLLQLDEKFRLLGPGKRVVDLGAAPGGWTQIA 88
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 22 VDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
D+VL D +P G D L A A +L GG FV K+F+ SLL
Sbjct: 139 ADLVLSDMAAPTTGHQQT-DHLRIMGLAEAAYDFAEEVLAPGGAFVAKLFQGGAERSLLD 197
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
++ F V KP ASR ES+E +VV +
Sbjct: 198 RLRRDFAVVKHAKPPASRAESSETYVVATGF 228
>gi|24647580|ref|NP_650590.1| CG5220 [Drosophila melanogaster]
gi|9910870|sp|Q9VEP1.1|RMJ1A_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG5220;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300216|gb|AAF55380.1| CG5220 [Drosophila melanogaster]
gi|25012244|gb|AAN71236.1| LD21957p [Drosophila melanogaster]
gi|220943874|gb|ACL84480.1| CG5220-PA [synthetic construct]
gi|220953752|gb|ACL89419.1| CG5220-PA [synthetic construct]
Length = 302
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + TSLL
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKG-NATSLLS 175
Query: 81 IFKQL-FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
Q+ F++ KP +SR S E FVVC + P + +P
Sbjct: 176 SQMQIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLPEGYIPQVINP 220
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+ ++ + L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL 63
>gi|221041826|dbj|BAH12590.1| unnamed protein product [Homo sapiens]
Length = 192
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 51 ALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQH 110
AL +A+ +LK GG FV K+FR +D T L + F V KP++SR S E F VCQ
Sbjct: 2 ALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQG 61
Query: 111 YIAP 114
Y P
Sbjct: 62 YDPP 65
>gi|333909215|ref|YP_004482801.1| ribosomal RNA large subunit methyltransferase E [Marinomonas
posidonica IVIA-Po-181]
gi|333479221|gb|AEF55882.1| Ribosomal RNA large subunit methyltransferase E [Marinomonas
posidonica IVIA-Po-181]
Length = 206
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T + AI E+ K D+V+ D +PN+ N D L AL +A+ +L+ G
Sbjct: 96 DFTEQEVYEAILAEIGDQKADLVISDMAPNMSGNSSSDQPQAMYLVELALDMAAHVLRPG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F+ KVF+ + + L ++ F V + KP ASR S E++++ + Y
Sbjct: 156 GNFLVKVFQGEGFEEYLKAMREQFGSVVTRKPDASRARSREVYLLGRQY 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA------KQNMMASSII 238
GYRSRA++KLI++N K + ++ VDL AAPGGW Q+A K ++AS I+
Sbjct: 27 GYRSRASYKLIEINDKDKLIRPGMSVVDLGAAPGGWSQIAAKLIGDKGTIVASDIL 82
>gi|195570241|ref|XP_002103117.1| GD19132 [Drosophila simulans]
gi|194199044|gb|EDX12620.1| GD19132 [Drosophila simulans]
Length = 302
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + TSLL
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKG-NATSLLS 175
Query: 81 IFKQL-FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
Q+ F++ KP +SR S E FVVC + P + +P
Sbjct: 176 SQMQIFFKKFDIYKPPSSRPSSIEAFVVCSGFCLPEGYIPQVINP 220
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+ ++ + L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL 63
>gi|195349217|ref|XP_002041143.1| GM15199 [Drosophila sechellia]
gi|194122748|gb|EDW44791.1| GM15199 [Drosophila sechellia]
Length = 302
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + TSLL
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKG-NATSLLS 175
Query: 81 IFKQL-FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
Q+ F++ KP +SR S E FVVC + P + +P
Sbjct: 176 SQMQIFFKKFDIYKPPSSRPSSIEAFVVCSGFCLPEGYIPQVINP 220
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKLI ++ + L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLIHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL 63
>gi|119504342|ref|ZP_01626422.1| ribosomal RNA methyltransferase RrmJ/FtsJ [marine gamma
proteobacterium HTCC2080]
gi|119459850|gb|EAW40945.1| ribosomal RNA methyltransferase RrmJ/FtsJ [marine gamma
proteobacterium HTCC2080]
Length = 208
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%)
Query: 1 MEDITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
+ D T + A+ L VDVVL D +PN+ D L AL LA+ L+
Sbjct: 95 LGDFTEEAVFEALLNLLGESAVDVVLSDMAPNMSGVSAVDQPRSMYLVELALDLATQTLE 154
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+GG V+KVF+ + + +++ +Q F RV + KP+ASR S E+++V +
Sbjct: 155 KGGTLVSKVFQGEGFEAVMSTARQNFDRVLTRKPEASRPRSREVYLVASGF 205
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 186 VGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV------AKQNMMASSIIH 239
V +GYRSRA +KL ++N + ++ +DL AAPGGW QV A+ ++AS I+
Sbjct: 25 VKEGYRSRACYKLKEINDRDRVIKPGMTVLDLGAAPGGWSQVAVEMVGARGRVIASDILP 84
Query: 240 FD 241
D
Sbjct: 85 MD 86
>gi|349686269|ref|ZP_08897411.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter oboediens 174Bp2]
Length = 254
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
+ DVV+ D +PN + D L AL A IL GG FV KVF+ +L
Sbjct: 156 RADVVMSDMAPNTTGHAPTDHLRIIGLAELALDFAVRILAPGGTFVAKVFQGGSEKQMLA 215
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K++F +V KP ASRKES+E++VV +
Sbjct: 216 DLKRMFTQVRHAKPPASRKESSELYVVATGF 246
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRAAFKLI+L+ +F+ ++ VDL AAPGGW QVA + A+ ++ D V
Sbjct: 71 QGWRSRAAFKLIELDDRFQLIRPGARVVDLGAAPGGWTQVAVKR-GAAEVVGVDLLPVDP 129
Query: 248 HPSTTV 253
P T+
Sbjct: 130 VPGATI 135
>gi|296484247|tpg|DAA26362.1| TPA: FtsJ homolog 1-like [Bos taurus]
Length = 327
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT I + + D+V+ DG+P+V ++ Y Q L L AL LA +LK G
Sbjct: 91 DITQLSTAKEIIQHFEDCPTDLVVCDGAPDV--TGLHVEYMQAQLLLAALNLAMHVLKPG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP----AKLD 118
G FV K+FR +D T + + F RV KP++SR S E F VC+ Y P L
Sbjct: 149 GCFVGKIFRGRDVTLIYSQLRVFFSRVLCAKPRSSRNSSIEAFAVCKGYNPPEGFLPDLT 208
Query: 119 TKFFDPKYAFKEL 131
D Y F +L
Sbjct: 209 KPLLDHSYDFNQL 221
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIH 239
KG+R+R+AFKL+QL+ +F+ Q +DLCAAPG W QV Q + H
Sbjct: 19 KGWRARSAFKLLQLDEEFQLFQGVTRAIDLCAAPGSWSQVLSQKIGGQGSGH 70
>gi|87198497|ref|YP_495754.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
aromaticivorans DSM 12444]
gi|123490739|sp|Q2GB53.1|RLME_NOVAD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|87134178|gb|ABD24920.1| 23S rRNA Um-2552 2'-O-methyltransferase [Novosphingobium
aromaticivorans DSM 12444]
Length = 222
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRAAFKLI+L+ KF L+ +K VDL APGGW QV ++ A+ I+ D
Sbjct: 42 GWRSRAAFKLIELDEKFGLLKGAKRVVDLGIAPGGWSQVVRKKAPAAKIVGID 94
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+VL D + N + D L A+ A L GG FV KVF T LL I
Sbjct: 129 DLVLSDMAANTVGHKQTDHLRTMGLVETAVDFAVQTLAPGGAFVAKVFAGGTDTELLAIL 188
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V KP ASRK+S+E +V+ Q +
Sbjct: 189 KKNFTTVKHAKPPASRKDSSEWYVIAQGF 217
>gi|310800597|gb|EFQ35490.1| FtsJ-like methyltransferase [Glomerella graminicola M1.001]
Length = 410
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%)
Query: 14 TRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSK 73
++ T +VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR +
Sbjct: 167 AKQQATDRVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGR 226
Query: 74 DYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
+ L K F+ V KP++SR S E F+VC ++ P +P
Sbjct: 227 NVDLLYAQLKIFFETVVVAKPRSSRASSVEAFIVCINFQPPVGFHASLENP 277
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFANVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|292654359|ref|YP_003534256.1| ribosomal RNA large subunit methyltransferase J [Haloferax volcanii
DS2]
gi|448293905|ref|ZP_21484007.1| 23S rRNA methyltransferase J [Haloferax volcanii DS2]
gi|291372926|gb|ADE05153.1| ribosomal RNA large subunit methyltransferase J [Haloferax volcanii
DS2]
gi|445569298|gb|ELY23872.1| 23S rRNA methyltransferase J [Haloferax volcanii DS2]
Length = 259
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYSLDHARSVYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK----L 117
G F KVF D L ++ FQ V S +P ASR S+E ++V +H++ AP + L
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGKHFLTAPVRKGDEL 205
Query: 118 DTKFFD 123
D + D
Sbjct: 206 DVEIVD 211
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QV + +
Sbjct: 14 EGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVVSEEV 58
>gi|433423601|ref|ZP_20406256.1| 23S rRNA methyltransferase J [Haloferax sp. BAB2207]
gi|448573557|ref|ZP_21641040.1| 23S rRNA methyltransferase J [Haloferax lucentense DSM 14919]
gi|448597704|ref|ZP_21654629.1| 23S rRNA methyltransferase J [Haloferax alexandrinus JCM 10717]
gi|432198328|gb|ELK54624.1| 23S rRNA methyltransferase J [Haloferax sp. BAB2207]
gi|445718463|gb|ELZ70153.1| 23S rRNA methyltransferase J [Haloferax lucentense DSM 14919]
gi|445739165|gb|ELZ90674.1| 23S rRNA methyltransferase J [Haloferax alexandrinus JCM 10717]
Length = 259
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYSLDHARSVYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK----L 117
G F KVF D L ++ FQ V S +P ASR S+E ++V +H++ AP + L
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGKHFLTAPVRKGDEL 205
Query: 118 DTKFFD 123
D + D
Sbjct: 206 DVEIVD 211
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 EGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEEV 58
>gi|395780998|ref|ZP_10461442.1| ribosomal RNA large subunit methyltransferase E [Bartonella
washoensis 085-0475]
gi|395416873|gb|EJF83235.1| ribosomal RNA large subunit methyltransferase E [Bartonella
washoensis 085-0475]
Length = 242
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 4/57 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFD 241
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA + + +S S++ D
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVAGRIVGSSDEKPSVVGID 111
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +L+ G F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLRPRGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 NKLKQNFKTVHHVKPPASRMESVELYLLA 231
>gi|448481917|ref|ZP_21605232.1| 23S rRNA methyltransferase J [Halorubrum arcis JCM 13916]
gi|445821616|gb|EMA71405.1| 23S rRNA methyltransferase J [Halorubrum arcis JCM 13916]
Length = 261
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T ++ R + + DVVL D +PN+ + D L AL A +L G
Sbjct: 86 DMTEERTRHYLREAVDEGGADVVLSDMAPNMTGEYSLDHARSVHLARQALDTADELLAPG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF+ +D + FQ V + P ASR S+E+++V + Y
Sbjct: 146 GDFVVKVFQGQDLDAFRDDVADSFQYVRTVSPPASRDSSSEVYLVAKGY 194
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+A+KL QL+ + + L VDL AAPGGW+QVA + + S +
Sbjct: 14 QGYRARSAYKLKQLDEEADLLGPGDTVVDLGAAPGGWLQVAAEEVGESGTV 64
>gi|294010578|ref|YP_003544038.1| cell division protein methyltransferase FtsJ [Sphingobium japonicum
UT26S]
gi|292673908|dbj|BAI95426.1| cell division protein methyltransferase FtsJ [Sphingobium japonicum
UT26S]
Length = 215
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRAAFKLI+L+ KF FL+ S+ VDL APGGW QV ++ + ++ D
Sbjct: 33 GWRSRAAFKLIELDEKFHFLKGSRAVVDLGVAPGGWAQVVRKLCPKAKVVGID 85
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ D + N + D L A A L++GG FV KVF LL I
Sbjct: 120 DLVISDMAANTVGHAATDHLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTDADLLAIL 179
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F + KP ASRK S E +VV Q +
Sbjct: 180 KRHFTTIKHAKPPASRKGSVEWYVVAQGF 208
>gi|195500126|ref|XP_002097241.1| GE24604 [Drosophila yakuba]
gi|194183342|gb|EDW96953.1| GE24604 [Drosophila yakuba]
Length = 302
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + TSLL
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKG-NATSLLS 175
Query: 81 IFKQL-FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
Q+ F++ KP +SR S E FVVC + P + +P
Sbjct: 176 SQMQIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLPEGYIPQVINP 220
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+ ++ + L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL 63
>gi|110772930|ref|XP_001123010.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like,
partial [Apis mellifera]
Length = 225
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRAA+KLI+LN KF FL+K VDL AAPGGW QVA + AS ++ D
Sbjct: 42 GWRSRAAYKLIELNDKFHFLKKGIKVVDLGAAPGGWSQVAVYH-KASKVVGID 93
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ D +PN + D LT AL A IL G F+ KVF+ +L
Sbjct: 126 KADLVMSDMAPNTTGHAATDHIRIVNLTEQALDFAIKILNLNGVFIAKVFQGGSEKLMLN 185
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F+ V KP ASRKES E++V+ +
Sbjct: 186 NLKRSFKIVKHAKPPASRKESRELYVIATGF 216
>gi|344344107|ref|ZP_08774972.1| Ribosomal RNA large subunit methyltransferase E [Marichromatium
purpuratum 984]
gi|343804391|gb|EGV22292.1| Ribosomal RNA large subunit methyltransferase E [Marichromatium
purpuratum 984]
Length = 206
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
L+ +DVVL D +PN+ V D L AL+LA LK GG KVF+ +
Sbjct: 110 LEAAPLDVVLSDMAPNITGTAVVDQARVMYLVELALELAQARLKPGGALAVKVFQGSGFD 169
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L +Q F RV + KP++SR S E+++V + +
Sbjct: 170 DYLRTLRQSFSRVVTRKPKSSRSASREVYLVAKGF 204
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+KL++L + L VDL AAPG W QVA +
Sbjct: 27 GYRSRAAYKLLELQERDRLLAPGMRVVDLGAAPGSWSQVAAR 68
>gi|448611198|ref|ZP_21661832.1| 23S rRNA methyltransferase J [Haloferax mucosum ATCC BAA-1512]
gi|445743630|gb|ELZ95111.1| 23S rRNA methyltransferase J [Haloferax mucosum ATCC BAA-1512]
Length = 257
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKERLTASIGEAGADAVVSDMAPNMTGEYSLDHARSIYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAKL 117
G F KVF +D + FQ V S +P+ASR S+E ++V +H++ AP ++
Sbjct: 146 GDFAVKVFDGQDLADFRADMEPEFQYVRSIRPKASRDSSSEQYLVGKHFLTAPVRV 201
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 EGYRARSAYKLKQLDEDAGLFGPGNTVVDLGAAPGGWLQVASERV 58
>gi|302407548|ref|XP_003001609.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Verticillium
albo-atrum VaMs.102]
gi|261359330|gb|EEY21758.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Verticillium
albo-atrum VaMs.102]
Length = 398
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD+V+ DG+P+V D Y Q L AL LA +LK GG FV K+FR ++ L
Sbjct: 166 VDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQ 225
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
K F++V KP++SR S E F+VC ++ P +P
Sbjct: 226 LKVFFEKVIVAKPRSSRASSVEAFIVCINFQPPPGFKASLENP 268
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
+G+R+R+AFKL+QL+ +F+ VDLCAAPG W QV + ++
Sbjct: 19 QGWRARSAFKLLQLDEEFDLFHGVTRVVDLCAAPGSWSQVLSRVLI 64
>gi|448312389|ref|ZP_21502135.1| 23S rRNA methyltransferase J [Natronolimnobius innermongolicus JCM
12255]
gi|445601774|gb|ELY55757.1| 23S rRNA methyltransferase J [Natronolimnobius innermongolicus JCM
12255]
Length = 260
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ R + + +VD V+ D +PN+ + D L A + A +L G
Sbjct: 89 DMTEDRTRERVI-DAAGGEVDAVVSDMAPNMSGEYSLDQARSLYLARQAFETALELLDTG 147
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D L FQ V +T P+ASR ES+EI+++ + + AP +
Sbjct: 148 GNFVVKVFEGPDVDDLRADLDDEFQYVRATAPKASRDESSEIYLIGKGRLTAPVR 202
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFD 241
+GYRSRAA+KL QL+ + VDL AAPGGW+QVA + + ++I D
Sbjct: 14 EGYRSRAAYKLKQLDDLENVINGGDTVVDLGAAPGGWLQVAAEKVGPRGNVIGVD 68
>gi|194900526|ref|XP_001979808.1| GG21940 [Drosophila erecta]
gi|190651511|gb|EDV48766.1| GG21940 [Drosophila erecta]
Length = 300
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + TSLL
Sbjct: 117 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKG-NATSLLS 175
Query: 81 IFKQL-FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
Q+ F++ KP +SR S E FVVC + P + +P
Sbjct: 176 SQMQIFFKKFDIYKPPSSRPSSIEAFVVCSGFCLPEGYIPQVINP 220
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+ ++ + L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL 63
>gi|149375763|ref|ZP_01893531.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter algicola
DG893]
gi|149359888|gb|EDM48344.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter algicola
DG893]
Length = 206
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
+ DVV+ D +PN+ D + L AL +A +LK GG FV KVF+ + + +LL
Sbjct: 114 RADVVISDMAPNMSGMAAVDIPNAMGLVELALDMAQQVLKPGGVFVAKVFQGEGFDALLA 173
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
++ F V S KP +SR S EI+ VC+ +
Sbjct: 174 EMRKSFGTVVSRKPDSSRARSREIYQVCKGF 204
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDD 242
GYRSRA++KLI+L+ K + + VDL AAPGGW QVA + + + ++ D
Sbjct: 27 GYRSRASYKLIELDNKDRLFRPGQTVVDLGAAPGGWSQVAIERVGDNGVVVASD 80
>gi|381166722|ref|ZP_09875936.1| Ribosomal RNA large subunit (23S) methyltransferase [Phaeospirillum
molischianum DSM 120]
gi|380684295|emb|CCG40748.1| Ribosomal RNA large subunit (23S) methyltransferase [Phaeospirillum
molischianum DSM 120]
Length = 253
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
GYRSRAAFK+IQL+ +F L+ VDL AAPGGW QVA Q + A
Sbjct: 62 GYRSRAAFKIIQLDDRFHLLRPGVRVVDLGAAPGGWTQVAVQRVKAG 108
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 23 DVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
DVVL D +P G + D L AL A +L GG FV KVF+ +LL
Sbjct: 154 DVVLSDMAAPTTG-HPSTDHLRIIALVEVALHFAMEVLTPGGAFVAKVFQGGTEKTLLDQ 212
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V KP ASR +SAE +VV +
Sbjct: 213 LKKNFTTVRHAKPPASRSDSAETYVVATGF 242
>gi|448622400|ref|ZP_21669094.1| 23S rRNA methyltransferase J [Haloferax denitrificans ATCC 35960]
gi|445754482|gb|EMA05887.1| 23S rRNA methyltransferase J [Haloferax denitrificans ATCC 35960]
Length = 259
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYSLDHARSVYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK----L 117
G F KVF D L ++ FQ V S +P ASR S+E ++V +H++ AP + L
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGKHFLTAPVRKGDEL 205
Query: 118 DTKFFD 123
D + D
Sbjct: 206 DVEIVD 211
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 EGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEEV 58
>gi|448320901|ref|ZP_21510386.1| 23S rRNA methyltransferase J [Natronococcus amylolyticus DSM 10524]
gi|445605328|gb|ELY59258.1| 23S rRNA methyltransferase J [Natronococcus amylolyticus DSM 10524]
Length = 261
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ R +T + VDVV+ D +PN+ + D L A + A +L G
Sbjct: 90 DMTEDRTRDRVT-DAAAGSVDVVVSDMAPNMSGEYSLDQARSLHLARQAFETALDLLDSG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQ 109
G F+ KVF D +L + FQ V +T P ASR+ S+E++ + +
Sbjct: 149 GNFLVKVFDGPDVDALRADLEGEFQYVRATAPDASRESSSELYFIAK 195
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESV- 245
+GYRSRAA+KL QL+ + VDL AAPGGW++VA + + +I D + +
Sbjct: 14 EGYRSRAAYKLKQLDDLENVISGGDTVVDLGAAPGGWLEVAAERVGPQGRVIGVDLQRIK 73
Query: 246 -LKHPSTTVEIQECCKDI 262
L+ P T I+ D+
Sbjct: 74 DLEMPGGTDRIETIRGDM 91
>gi|82595412|ref|XP_725839.1| cell division protein [Plasmodium yoelii yoelii 17XNL]
gi|23480991|gb|EAA17404.1| putative cell division protein [Plasmodium yoelii yoelii]
Length = 443
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 40 DAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF-KQLFQRVHSTKPQASR 98
D + Q L L +LK+ +LK GG F++K+FR +YT LL + + F++++ KPQ+SR
Sbjct: 5 DEFIQSQLILSSLKVCCSVLKIGGNFISKIFRG-EYTGLLIFYLNKFFEKIYVCKPQSSR 63
Query: 99 KESAEIFVVCQHYIAPAKLDTKFF 122
+S E F+VC ++ P T F
Sbjct: 64 NKSLESFLVCLNFHLPKSSITSLF 87
>gi|448337597|ref|ZP_21526672.1| 23S rRNA methyltransferase J [Natrinema pallidum DSM 3751]
gi|445625174|gb|ELY78540.1| 23S rRNA methyltransferase J [Natrinema pallidum DSM 3751]
Length = 257
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T DK R + + VDVV+ D +PN+ + D L A + A +L G
Sbjct: 86 DMTEDKTRKRVV-DAAGGPVDVVVSDMAPNMSGEYSLDQARSLHLARQAFQTALELLDSG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D + FQ V +T P+ASR ES+EI+ + + + AP +
Sbjct: 145 GDFVVKVFEGPDVDDFRADVEAEFQYVRATSPKASRDESSEIYFIGKGRLTAPVR 199
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYRSRAA+KL QL+ + + VDL AAPGGW++VA + +
Sbjct: 13 EGYRSRAAYKLKQLDALENVIDRGDTVVDLGAAPGGWLEVAAEEV 57
>gi|392377558|ref|YP_004984717.1| ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
brasilense Sp245]
gi|356879039|emb|CCC99935.1| ribosomal RNA large subunit (23S) methyltransferase [Azospirillum
brasilense Sp245]
Length = 236
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKL+QL+ KF L K VDL AAPGGW QVA
Sbjct: 49 RGFRSRAAFKLLQLDEKFHLLGPGKRVVDLGAAPGGWTQVA 89
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 22 VDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
DVVL D +P +G + D L A A +L GG FV K+F+ SLL
Sbjct: 140 ADVVLSDMAAPTIG-HQSTDHLRIMALAEAAYDFAEEVLAPGGAFVAKLFQGGAEKSLLE 198
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V KP ASR ES+E +VV +
Sbjct: 199 RLKRDFTTVRHAKPPASRAESSETYVVATGF 229
>gi|448606606|ref|ZP_21659032.1| 23S rRNA methyltransferase J [Haloferax sulfurifontis ATCC BAA-897]
gi|445738814|gb|ELZ90326.1| 23S rRNA methyltransferase J [Haloferax sulfurifontis ATCC BAA-897]
Length = 259
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYSLDHARSVYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK----L 117
G F KVF D L ++ FQ V S +P ASR S+E ++V +H++ AP + L
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGKHFLTAPVRKGDEL 205
Query: 118 DTKFFD 123
D + D
Sbjct: 206 DVEIVD 211
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 EGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEKV 58
>gi|448543915|ref|ZP_21625376.1| 23S rRNA methyltransferase J [Haloferax sp. ATCC BAA-646]
gi|448551075|ref|ZP_21629217.1| 23S rRNA methyltransferase J [Haloferax sp. ATCC BAA-645]
gi|448558550|ref|ZP_21633107.1| 23S rRNA methyltransferase J [Haloferax sp. ATCC BAA-644]
gi|445706057|gb|ELZ57944.1| 23S rRNA methyltransferase J [Haloferax sp. ATCC BAA-646]
gi|445710631|gb|ELZ62429.1| 23S rRNA methyltransferase J [Haloferax sp. ATCC BAA-645]
gi|445712302|gb|ELZ64084.1| 23S rRNA methyltransferase J [Haloferax sp. ATCC BAA-644]
Length = 259
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYSLDHARSVYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK----L 117
G F KVF D L ++ FQ V S +P ASR S+E ++V +H++ AP + L
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGKHFLTAPVRKGDEL 205
Query: 118 DTKFFD 123
D + D
Sbjct: 206 DVEIVD 211
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 EGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAV 58
>gi|408382417|ref|ZP_11179961.1| 23S rRNA methyltransferase J [Methanobacterium formicicum DSM 3637]
gi|407814772|gb|EKF85395.1| 23S rRNA methyltransferase J [Methanobacterium formicicum DSM 3637]
Length = 206
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
YRSRA+FKL+QLNRK++ ++K VDL AAPGGW QVA
Sbjct: 22 YRSRASFKLLQLNRKYKIIKKGDSVVDLGAAPGGWSQVA 60
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T ++ I R L+ K V++ D +P + D L L+++ ILK
Sbjct: 92 DFTHEETLDEIRRTLQG-KAQVIISDAAPKLSGIKDLDQLRSIDLARTVLQISDSILKYK 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G + KVF+ + Y LL KQ FQ V +TKP +SRK+S E++VV + Y
Sbjct: 151 GNMIMKVFQGEGYPELLKEVKQNFQTVRTTKPPSSRKKSGEMYVVGRGY 199
>gi|448303969|ref|ZP_21493915.1| 23S rRNA methyltransferase J [Natronorubrum sulfidifaciens JCM
14089]
gi|445592596|gb|ELY46783.1| 23S rRNA methyltransferase J [Natronorubrum sulfidifaciens JCM
14089]
Length = 261
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T DK R + + VD V+ D +PN+ + D L A + A +L G
Sbjct: 90 DMTEDKTRERVI-DAAGGPVDAVVSDMAPNMSGEYSLDQARSLYLARQAFETALELLDTG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D + FQ V +T P+ASR+ES+EI+ + + + AP +
Sbjct: 149 GNFVVKVFEGPDVDDFRADIEDEFQYVRATSPKASREESSEIYFIAKGRLTAPVR 203
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM-ASSIIHFD 241
+GYRSRAA+KL QL+ + VDL AAPGGW+QVA + + S+I D
Sbjct: 14 EGYRSRAAYKLKQLDNLENVISGGNTVVDLGAAPGGWLQVAAEKVGPPGSVIGVD 68
>gi|390165494|ref|ZP_10217822.1| 23S rRNA methyltransferase J [Sphingobium indicum B90A]
gi|389591669|gb|EIM69589.1| 23S rRNA methyltransferase J [Sphingobium indicum B90A]
Length = 195
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRAAFKLI+L+ KF FL+ S+ VDL APGGW QV ++ + ++ D
Sbjct: 13 GWRSRAAFKLIELDEKFHFLKGSRAVVDLGVAPGGWAQVVRKLCPKAKVVGID 65
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ D + N + D L A A L++GG FV KVF LL I
Sbjct: 100 DLVISDMAANTVGHAATDHLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTDADLLAIL 159
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F + KP ASRK S E +VV Q +
Sbjct: 160 KRHFTTIKHAKPPASRKGSVEWYVVAQGF 188
>gi|325265685|ref|ZP_08132374.1| ribosomal RNA large subunit methyltransferase J [Kingella
denitrificans ATCC 33394]
gi|324982816|gb|EGC18439.1| ribosomal RNA large subunit methyltransferase J [Kingella
denitrificans ATCC 33394]
Length = 213
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYD---AYHQCCLTLGALKLASGILKEGGWFVTKVFRSK 73
L +D+V+ D +PN+ N V D +Y+ C L AL A LK GG F+ KVF+
Sbjct: 118 LGNRPLDLVICDMAPNMSGNAVTDQARSYYLCEL---ALDFARNHLKPGGSFLIKVFQGA 174
Query: 74 DYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
Y L + LFQ V + KP ASR S+EI+++
Sbjct: 175 GYQEYLAEMRSLFQTVQTRKPDASRNRSSEIYLL 208
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ + DL +APG W QVA
Sbjct: 35 GYRARAAYKLLEINEKDKLIKSGTLLADLGSAPGSWSQVA 74
>gi|152995050|ref|YP_001339885.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas sp. MWYL1]
gi|150835974|gb|ABR69950.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas sp. MWYL1]
Length = 196
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T + AI E+ K D+V+ D +PN+ N D L AL +A+ +L+ G
Sbjct: 86 DFTEQEVYEAILAEIGDKKADLVISDMAPNMSGNSSSDQPQAMYLVELALDMAAQVLRPG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F+ KVF+ + + L + F V + KP ASR S E++++ + Y
Sbjct: 146 GNFLVKVFQGEGFEEYLKTMRAQFDSVVTRKPDASRARSREVYLLGRQY 194
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRA++KLI++N K + + + VDL AAPGGW QVA
Sbjct: 17 GYRSRASYKLIEINDKDKLFKPAMRVVDLGAAPGGWSQVA 56
>gi|312385342|gb|EFR29867.1| hypothetical protein AND_00887 [Anopheles darlingi]
Length = 308
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 50/94 (53%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L L AL + + +L GG FV K+FR K SL
Sbjct: 116 KAQLVICDGAPDVTGLHDMDEYLQSQLLLAALGITTFVLVPGGTFVAKIFRGKCTHSLYS 175
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F V KPQ+SR S E FVVCQ Y P
Sbjct: 176 QLRIFFDTVDIAKPQSSRNSSIEAFVVCQGYNPP 209
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
G+R+R+AFKLI L+ + L VDLCAAPG W QV + + S
Sbjct: 20 GWRARSAFKLIHLDETYNILDGVTRAVDLCAAPGSWSQVLSKRLYLS 66
>gi|110669535|ref|YP_659346.1| ribosomal RNA large subunit methyltransferase J [Haloquadratum
walsbyi DSM 16790]
gi|121692027|sp|Q18E61.1|RLME_HALWD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|109627282|emb|CAJ53772.1| 23S rRNA (uridine-2'-O-) methyltransferase [Haloquadratum walsbyi
DSM 16790]
Length = 256
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T + + A+ + + V+VVL D +PN+ + D L A +A+ IL G
Sbjct: 86 DMTDESTKNALRKRVNNSSVNVVLSDMAPNMTGEYSVDHARSVHLARQAFSVATDILPAG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-AP 114
G F+ KVF +D F+ V S +P ASR S+E ++V +H I AP
Sbjct: 146 GDFIVKVFDGRDLADFRQDVDTEFEYVKSIRPDASRDSSSEQYLVGKHRITAP 198
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
+GYR+R+A+KL Q++ +DL AAPGGW+QVA + + S +
Sbjct: 14 EGYRTRSAYKLQQIDADAGVFGPGNTVIDLGAAPGGWLQVAAEAVGPSGTV 64
>gi|395791528|ref|ZP_10470986.1| ribosomal RNA large subunit methyltransferase E [Bartonella
alsatica IBS 382]
gi|395408891|gb|EJF75501.1| ribosomal RNA large subunit methyltransferase E [Bartonella
alsatica IBS 382]
Length = 242
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFDDES 244
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA + + S S++ D
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVAGRIVETSDKKPSVVGIDYLH 114
Query: 245 VLKHPSTTV 253
V + P +
Sbjct: 115 VDRLPGVVM 123
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 23 DVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 146 DVVLSDMAAPTTGHRQT-DHLRTIFLCEVAADFALSVLKPGGHFLAKAFQGGTENTLLTT 204
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 205 LKQNFKTVHHVKPPASRTESVELYLLA 231
>gi|56551298|ref|YP_162137.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ZM4]
gi|260753080|ref|YP_003225973.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|384411860|ref|YP_005621225.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|397676729|ref|YP_006518267.1| ribosomal RNA large subunit methyltransferase E [Zymomonas mobilis
subsp. mobilis ATCC 29191]
gi|81355445|sp|Q5NQH8.1|RLME_ZYMMO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56542872|gb|AAV89026.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258552443|gb|ACV75389.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|335932234|gb|AEH62774.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|395397418|gb|AFN56745.1| Ribosomal RNA large subunit methyltransferase E [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 221
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAAFKLI+L+ +F L+ ++ +DL APGGW QVA++ + I+ D
Sbjct: 39 GYRSRAAFKLIELDERFSLLKNARRIIDLGIAPGGWSQVARKKAPQAKIVGID 91
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D+VL D + N + D L A AS L+EGG FV KV L+ +
Sbjct: 125 ADLVLSDMAANTIGHAQTDHLRTMALVEEAAVFASETLREGGSFVAKVLAGGADKDLVAL 184
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+LF +V KP ASR+ES+E +V+ Q++
Sbjct: 185 LKRLFGQVKHAKPPASRRESSEWYVIAQNF 214
>gi|395767048|ref|ZP_10447586.1| ribosomal RNA large subunit methyltransferase E [Bartonella doshiae
NCTC 12862]
gi|395415660|gb|EJF82094.1| ribosomal RNA large subunit methyltransferase E [Bartonella doshiae
NCTC 12862]
Length = 242
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA + + +S+
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVAVRIVGSSN 102
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ SLL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLKPGGVFLAKAFQGGAENSLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 TTLKQNFKTVHHVKPPASRAESVELYLLA 231
>gi|148557611|ref|YP_001265193.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas wittichii
RW1]
gi|189040343|sp|A5VFI9.1|RLME_SPHWW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|148502801|gb|ABQ71055.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas wittichii
RW1]
Length = 229
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAA+KLI+L+ +F FL+ +K +DL APGGW QV ++ ++I+ D
Sbjct: 42 GYRSRAAYKLIELDERFHFLRGAKRVIDLGIAPGGWTQVVRRVCPQAAIVGID 94
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D+VL D + N + D L AS +L+ GG +V KV L+
Sbjct: 128 ADIVLSDMAANTVGHQQTDHLRTMALVEAGCLFASEVLRPGGTYVAKVLAGGADHGLVAE 187
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+LF V KP ASRK+S+E +V+ Q +
Sbjct: 188 LKRLFTTVKHAKPPASRKDSSEWYVIAQGF 217
>gi|38048043|gb|AAR09924.1| similar to Drosophila melanogaster CG5220, partial [Drosophila
yakuba]
Length = 191
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ + TSLL
Sbjct: 59 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKG-NATSLLS 117
Query: 81 IFKQL-FQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDTKFFDP 124
Q+ F++ KP +SR S E FVVC + P + +P
Sbjct: 118 SQMQIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLPEGYIPQVINP 162
>gi|423713186|ref|ZP_17687446.1| ribosomal RNA large subunit methyltransferase E [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|52355215|gb|AAU44782.1| FtsJ [Bartonella vinsonii subsp. arupensis]
gi|395423842|gb|EJF90031.1| ribosomal RNA large subunit methyltransferase E [Bartonella
vinsonii subsp. arupensis OK-94-513]
Length = 240
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVA 94
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTVYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 TTLKQNFKTVHHVKPPASRSESVELYLLA 231
>gi|395792525|ref|ZP_10471952.1| ribosomal RNA large subunit methyltransferase E [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|395432498|gb|EJF98484.1| ribosomal RNA large subunit methyltransferase E [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 240
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVA 94
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTVYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 TTLKQNFKTVHHVKPPASRSESVELYLLA 231
>gi|296283049|ref|ZP_06861047.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Citromicrobium
bathyomarinum JL354]
Length = 226
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAAFKLI+L+ KF L+ ++ VDL APGGW Q+A++ ++I+ D
Sbjct: 42 GYRSRAAFKLIELDEKFGILRGAERIVDLGIAPGGWSQIAQKKRPQATIVGID 94
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ D + N + D L A A L GG F+ KV LL +
Sbjct: 129 DLVMSDMAANTVGHKQTDHLRTMGLVETAADFAIQTLAPGGQFLAKVLAGGTDAQLLALL 188
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F+ V KP ASRK S+E +VV Q +
Sbjct: 189 KKNFKTVKHAKPPASRKGSSEWYVVAQGF 217
>gi|88606902|ref|YP_505099.1| ribosomal RNA large subunit methyltransferase J [Anaplasma
phagocytophilum HZ]
gi|123495326|sp|Q2GKK2.1|RLME_ANAPZ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|88597965|gb|ABD43435.1| ribosomal RNA large subunit methyltransferase J [Anaplasma
phagocytophilum HZ]
Length = 247
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQN 231
GYRSR+A+KLI++N KF+ LQ+ + +DL ++PGGW QVA +N
Sbjct: 66 GYRSRSAYKLIEINDKFKILQRGRFVLDLGSSPGGWAQVASKN 108
>gi|451941441|ref|YP_007462078.1| cell division protein ftsJ [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451900828|gb|AGF75290.1| cell division protein ftsJ [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 242
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QVA
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVA 94
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ SLL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLKTVYLCEVAADFALSVLKPGGHFLAKAFQGGAENSLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 TTLKQNFKTVHHVKPPASRSESVELYLLA 231
>gi|448628594|ref|ZP_21672363.1| 23S rRNA methyltransferase J [Haloarcula vallismortis ATCC 29715]
gi|445758125|gb|EMA09450.1| 23S rRNA methyltransferase J [Haloarcula vallismortis ATCC 29715]
Length = 263
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 2 EDITTDKCR-IAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILK 60
ED T D+ R I + VDVV+ D +PN+ + D L A ++A+ +L
Sbjct: 91 EDSTKDEIREIVGESDGTGGPVDVVISDMAPNMTGQYDLDHARSVHLVRQAFEVATDLLD 150
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQH 110
GG F KVF +D L+ + F+ V +P ASR S+E+++V +H
Sbjct: 151 AGGDFCAKVFDGQDLDDLIADIEPEFEYVREVRPDASRDSSSELYLVAKH 200
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA-SSIIHFDDESV- 245
+GYR+R+A+KL QL+ L + + VDL AAPGGWMQVA + + +++ D +++
Sbjct: 14 EGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIGERGTLVGVDRQTID 73
Query: 246 -LKHPSTTVE 254
L P TVE
Sbjct: 74 DLDDPEPTVE 83
>gi|383640200|ref|ZP_09952606.1| ribosomal RNA large subunit methyltransferase E [Sphingomonas
elodea ATCC 31461]
Length = 230
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAA+KL +L+ KF FL+ ++ VDL APGGW QV ++ + ++++ D
Sbjct: 42 GYRSRAAYKLTELDEKFGFLKGARRVVDLGVAPGGWTQVVRRVLPKAAVVGID 94
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D++L D + N + DA L A A L GG FV KVF ++L+
Sbjct: 129 DLILSDMAANTVGHPQTDALRTMALVETAFDFAIRTLAPGGDFVAKVFAGGADSALIAEM 188
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V KP ASRK S E +VV Q +
Sbjct: 189 KRAFTTVKHAKPPASRKGSVEWYVVAQGF 217
>gi|448582734|ref|ZP_21646238.1| 23S rRNA methyltransferase J [Haloferax gibbonsii ATCC 33959]
gi|445732382|gb|ELZ83965.1| 23S rRNA methyltransferase J [Haloferax gibbonsii ATCC 33959]
Length = 257
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ + +T + D V+ D +PN+ + D L A ++A +L G
Sbjct: 86 DMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYSLDHARSVYLARQAFEVAQELLATG 145
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G F KVF D L ++ FQ V S +P ASR S+E ++V +H++ AP +
Sbjct: 146 GDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASRDSSSEQYLVGKHFLTAPVR 200
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 EGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVASEAV 58
>gi|268323180|emb|CBH36768.1| putative ribosomal RNA large subunit methyltransferase J
[uncultured archaeon]
Length = 204
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD V+ D SP + YD + L+ AL +AS +L+ G FV K+F+ Y
Sbjct: 112 VDAVISDLSPQLSGTRDYDQFRSSELSTSALNIASALLRNNGNFVAKIFQGAYYNEFYKC 171
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
K F+ + P ASRK SAE++V+ + Y++
Sbjct: 172 VKAKFRYTRAHSPAASRKGSAEMYVIGKGYLS 203
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSR+AFKL+Q+N KF ++ V +DL AAPGGW QVA
Sbjct: 20 GYRSRSAFKLLQINTKFGLIRAGDVVLDLGAAPGGWSQVA 59
>gi|114327810|ref|YP_744967.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|122327225|sp|Q0BT08.1|RLME_GRABC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114315984|gb|ABI62044.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 230
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 16 ELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
L K D+V+ D +PN + D LT AL A L GG FV KVF+
Sbjct: 128 SLMGGKADLVMSDMAPNTTGHAATDHMRIIALTELALHFAFDALAPGGAFVAKVFQGGSE 187
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
LL KQ F V KP +SRKES+E++VV + +
Sbjct: 188 KQLLEPMKQRFASVRHAKPASSRKESSELYVVAKGF 223
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRAAFKLI+L+ KF + K +DL AAPGGW QVA + A+ ++ D V
Sbjct: 48 QGWRSRAAFKLIELDDKFGLISKGSRVIDLGAAPGGWTQVAMKR-GAAVVVGVDLLPVDP 106
Query: 248 HPSTTV 253
P T+
Sbjct: 107 VPGATL 112
>gi|345864622|ref|ZP_08816821.1| ribosomal RNA large subunit methyltransferase E [endosymbiont of
Tevnia jerichonana (vent Tica)]
gi|345877969|ref|ZP_08829700.1| carbamoyl-phosphate synthase large chain [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225008|gb|EGV51380.1| carbamoyl-phosphate synthase large chain [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345124319|gb|EGW54200.1| ribosomal RNA large subunit methyltransferase E [endosymbiont of
Tevnia jerichonana (vent Tica)]
Length = 206
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%)
Query: 16 ELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
+L VD+V+ D +PNV D L AL A +L+ GG FV KVF+ + +
Sbjct: 109 QLAGEPVDLVISDMAPNVTGMVTVDQPRSMYLCELALDFAKEVLRPGGGFVVKVFQGEGF 168
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L +Q F RV S KP++SR +S EI++V ++
Sbjct: 169 DDYLREMRQAFGRVVSRKPRSSRAKSREIYLVAGNF 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAK 229
GYRSRA FKL+++ K ++ VDL AAPGGW QVA+
Sbjct: 27 GYRSRAVFKLLEIQEKGRLIKPGMRVVDLGAAPGGWSQVAR 67
>gi|336476442|ref|YP_004615583.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosalsum zhilinae
DSM 4017]
gi|335929823|gb|AEH60364.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosalsum zhilinae
DSM 4017]
Length = 265
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRA++KL Q+N+KF ++++ VDL AAPGGW+QVA++
Sbjct: 17 GYRSRASYKLQQINKKFNVIKRNDTVVDLGAAPGGWLQVARE 58
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT++ I + DVV+ D +PN+ NW D L A + + IL+ G
Sbjct: 84 DITSESTVNKILDLVGEHGADVVICDAAPNMSGNWSLDHARSIDLANSAFECSQKILRPG 143
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA-PAK 116
G FV KVF+ + + K F + P+ASR +SAEI+V+ + ++ P K
Sbjct: 144 GNFVVKVFQGDMFKEFIDRVKSEFVHTKAYNPEASRSQSAEIYVIGKKMLSTPVK 198
>gi|84489178|ref|YP_447410.1| 23S rRNA methylase [Methanosphaera stadtmanae DSM 3091]
gi|121697907|sp|Q2NHD6.1|RLME_METST RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|84372497|gb|ABC56767.1| putative 23S rRNA methylase [Methanosphaera stadtmanae DSM 3091]
Length = 206
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D TT + + I EL K DVVL D +P + D + L++ +++ ILK
Sbjct: 94 DFTTKETQDIII-ELIDGKADVVLSDAAPKLTGIKDIDNFRAYDLSMAVIEIIDNILKNN 152
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G + K F+ + Y ++ K+ F+ V +TKP +SRK SAE++V+ + +
Sbjct: 153 GNLIMKAFQGEAYQEIIKNLKKKFRNVKTTKPNSSRKRSAEMYVIARGF 201
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
YRSRA++KL QL++K+ L+ VDL AAPGGW QV + +
Sbjct: 22 YRSRASYKLKQLDKKYSLLKPDYNVVDLGAAPGGWSQVVAETI 64
>gi|56460084|ref|YP_155365.1| 23S rRNA methyltransferase [Idiomarina loihiensis L2TR]
gi|81362904|sp|Q5QXK8.1|RLME_IDILO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56179094|gb|AAV81816.1| 23S rRNA methylase [Idiomarina loihiensis L2TR]
Length = 208
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
A+ + VDVVL D +PN+ N D L AL + +LK GG F KVF+
Sbjct: 107 ALLERIGGKNVDVVLSDMAPNMSGNGTVDQARSMYLVELALDMCHQVLKPGGSFAVKVFQ 166
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ + S L + F V + KP++SR S E+++V Y
Sbjct: 167 GQGFESFLKDVRAAFNDVKTRKPESSRARSREVYLVATDY 206
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQ 226
KG RSRA FKL ++ ++ + ++K + VDL AAPGGW Q
Sbjct: 28 KGLRSRAVFKLEEIQKRDKLIKKGQTVVDLGAAPGGWSQ 66
>gi|347759875|ref|YP_004867436.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter xylinus NBRC 3288]
gi|347578845|dbj|BAK83066.1| ribosomal RNA large subunit 23S methyltransferase RrmJ
[Gluconacetobacter xylinus NBRC 3288]
Length = 254
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLK 247
+G+RSRAAFKLI+L+ +F +Q VDL AAPGGW QVA + A+ ++ D V
Sbjct: 71 QGWRSRAAFKLIELDDRFHLIQPGTRVVDLGAAPGGWTQVAVKR-GAAEVVGVDLLPVDP 129
Query: 248 HPSTTVEIQECCKDIRVLGR 267
P TV I+ D + GR
Sbjct: 130 VPGATV-IEGDFNDPAMPGR 148
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 16 ELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDY 75
+L K D+V+ D +PN + D L AL A+ IL + G FV KVF+
Sbjct: 151 DLLGGKADLVMSDMAPNTTGHAPTDHLRIIGLAELALDFATRILAQDGAFVAKVFQGGSE 210
Query: 76 TSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+L K+LF +V KP ASRKES+E++VV +
Sbjct: 211 KQMLAELKRLFTQVRHAKPPASRKESSELYVVATGF 246
>gi|116748440|ref|YP_845127.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Syntrophobacter
fumaroxidans MPOB]
gi|143461985|sp|A0LGZ0.1|RLME_SYNFM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116697504|gb|ABK16692.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Syntrophobacter
fumaroxidans MPOB]
Length = 197
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
DVVL D +P+ V D+ L AL++A L+ GG FV K+F+ ++ LL
Sbjct: 106 DVVLSDMAPSTSGIRVADSARSALLFESALEMARSALRPGGHFVAKLFQGAEFHVLLQAV 165
Query: 83 KQLFQRVHSTKPQASRKESAEIFVV 107
K+ F+ V TKP ASRK+S EI+V+
Sbjct: 166 KRDFEWVKVTKPDASRKQSKEIYVI 190
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH- 248
Y +RA +KL ++ +++ L+ +DL AAPG WMQ A++ + S ++ D ++H
Sbjct: 18 YLARAVYKLQEIQDRYKILKPGNRVLDLGAAPGSWMQFAREIVGPSGLVVGVDLKGVEHR 77
Query: 249 -PSTTVEIQECCKD 261
P V +Q D
Sbjct: 78 FPEGVVVLQGDVTD 91
>gi|395787068|ref|ZP_10466669.1| ribosomal RNA large subunit methyltransferase E [Bartonella
birtlesii LL-WM9]
gi|395411492|gb|EJF78013.1| ribosomal RNA large subunit methyltransferase E [Bartonella
birtlesii LL-WM9]
Length = 242
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS----SIIHFD 241
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QV + + +S SI+ D
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKIIDLGAAPGGWCQVVSRIVGSSEKKPSIVGID 111
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLKPGGHFLAKAFQGGAENNLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
I KQ F+ VH KP ASR ES E++++
Sbjct: 203 TILKQNFKTVHHVKPPASRSESVELYLLA 231
>gi|253742114|gb|EES98965.1| FtsJ-like protein [Giardia intestinalis ATCC 50581]
Length = 268
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 24 VVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFK 83
+V+ DG+P+V D Y Q L A+ LA IL GG FV+KVFR + SLL
Sbjct: 107 LVVCDGAPDVTGVHDLDEYVQAGLVDHAMTLARRILAPGGTFVSKVFRGECLESLLRRNA 166
Query: 84 -QLFQRVHSTKPQASRKESAEIFVVCQHYI 112
F+ V +KP ASR S E F+VC Y+
Sbjct: 167 LSFFKHVDVSKPDASRASSMECFLVCTEYV 196
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESVLKH 248
G+R+R+A+KL+QL+ +++ VDLCAAPG W QV + + +II D + +
Sbjct: 17 GWRARSAYKLLQLDAQYDLFSGVTRAVDLCAAPGSWSQVLSRKLPDDAIIISVDLAPMAP 76
Query: 249 PSTTVEIQ 256
++IQ
Sbjct: 77 LPRVIQIQ 84
>gi|429191472|ref|YP_007177150.1| 23S rRNA methylase [Natronobacterium gregoryi SP2]
gi|448325400|ref|ZP_21514791.1| 23S rRNA methyltransferase J [Natronobacterium gregoryi SP2]
gi|429135690|gb|AFZ72701.1| 23S rRNA methylase [Natronobacterium gregoryi SP2]
gi|445615358|gb|ELY69006.1| 23S rRNA methyltransferase J [Natronobacterium gregoryi SP2]
Length = 260
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T ++ R + + VDVV+ D +PN+ + D L A + A+ +L G
Sbjct: 89 DMTEERTRERVV-DAAGGTVDVVVSDMAPNMSGEYSLDQARSLHLARQAYETATELLDTG 147
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV K+F D ++ FQ V T P+ASRKES+E++ + + I AP +
Sbjct: 148 GDFVVKIFEGPDVDDFKDEIEEEFQYVRVTNPEASRKESSEVYFIAKGRITAPVQ 202
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS---------II 238
+GYRSRAA+KL QL+ + + + VDL AAPGGW+QVA + + + I
Sbjct: 14 EGYRSRAAYKLKQLDELEDVISRGDTVVDLGAAPGGWLQVAAEAVGSEGQVIGVDLQRIK 73
Query: 239 HFDDE 243
FDDE
Sbjct: 74 GFDDE 78
>gi|334345476|ref|YP_004554028.1| ribosomal RNA large subunit methyltransferase E [Sphingobium
chlorophenolicum L-1]
gi|334102098|gb|AEG49522.1| Ribosomal RNA large subunit methyltransferase E [Sphingobium
chlorophenolicum L-1]
Length = 223
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
G+RSRAAFKLI+L+ KF F++ S+ VDL APGGW QV ++ + ++ D
Sbjct: 41 GWRSRAAFKLIELDEKFHFVKGSRAVVDLGVAPGGWAQVVRKLCPKAKVVGID 93
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D DK + + L D+V+ D + N + D L A A L++G
Sbjct: 109 DFMDDKAPVLLAEALGD-APDLVISDMAANTVGHAATDHLRTMGLVEAAAMFAVENLRKG 167
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF LL I K+ F + KP ASRK S E +VV Q +
Sbjct: 168 GTFVAKVFAGGTDADLLAILKKHFTTIKHAKPPASRKGSVEWYVVAQGF 216
>gi|448342210|ref|ZP_21531162.1| 23S rRNA methyltransferase J [Natrinema gari JCM 14663]
gi|445626201|gb|ELY79550.1| 23S rRNA methyltransferase J [Natrinema gari JCM 14663]
Length = 257
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T DK R + + VD V+ D +PN+ + D L A + A +L G
Sbjct: 86 DMTEDKTRKRVV-DAADGSVDAVISDMAPNMSGEYSLDQARSLHLARQAFETADELLDSG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D + FQ V +T P+ASR ES+E++ + + + AP +
Sbjct: 145 GDFVVKVFEGPDVDDFRADAEAEFQYVRATSPKASRDESSEVYFIGKGRLTAPVR 199
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYRSRAA+KL QL+R + + VDL AAPGGW++VA + +
Sbjct: 13 EGYRSRAAYKLKQLDRLENVIDRGDTVVDLGAAPGGWLEVAAEEV 57
>gi|448346741|ref|ZP_21535623.1| 23S rRNA methyltransferase J [Natrinema altunense JCM 12890]
gi|445632003|gb|ELY85226.1| 23S rRNA methyltransferase J [Natrinema altunense JCM 12890]
Length = 257
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T DK R + + VD V+ D +PN+ + D L A + A +L G
Sbjct: 86 DMTEDKTRKRVV-DAADGSVDAVISDMAPNMSGEYSLDQARSLHLARQAFETALELLDSG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D ++ FQ V +T P+ASR ES+E++ + + + AP +
Sbjct: 145 GDFVVKVFEGPDVDDFRADVEEEFQYVRATSPKASRDESSEVYFIGKGRLTAPVR 199
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYRSRAA+KL QL++ + + VDL AAPGGW++VA + +
Sbjct: 13 EGYRSRAAYKLKQLDQLENVIDRGDTVVDLGAAPGGWLEVAAEEV 57
>gi|414162942|ref|ZP_11419189.1| ribosomal RNA large subunit methyltransferase E [Afipia felis ATCC
53690]
gi|410880722|gb|EKS28562.1| ribosomal RNA large subunit methyltransferase E [Afipia felis ATCC
53690]
Length = 228
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMA 234
GYRSRAAFKL++++ K+ FL++ + VDL AAPGGW Q+A + + A
Sbjct: 43 GYRSRAAFKLLEMDDKYRFLKQGQAVVDLGAAPGGWSQIAAKRVGA 88
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
R + D+V+ D + N + D L A A+ +L GG F+ KVF+S
Sbjct: 126 RAMLGGGADIVMSDMAANTTGHRKTDQLRIVGLVESAAAFAAEVLNPGGVFLAKVFQSGA 185
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAK 116
+L K+ F V KP ASR++S+E +V+ + A+
Sbjct: 186 DATLQAELKRNFATVRHVKPAASRQDSSERYVLAIGFRGGAQ 227
>gi|194742497|ref|XP_001953739.1| GF17080 [Drosophila ananassae]
gi|190626776|gb|EDV42300.1| GF17080 [Drosophila ananassae]
Length = 301
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K +V+ DG+P+V D Y Q L + AL +A+ +L+ GG FV K+F+ L
Sbjct: 119 KAQLVVCDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATWLLSS 178
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
K F++ KP +SR S E FVVC + P
Sbjct: 179 QMKIFFKKFDIYKPPSSRPSSIEAFVVCSDFCLP 212
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
G+R+R+AFKL+ ++ + L + VDLCAAPG W QV + +
Sbjct: 20 GWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKL 63
>gi|332188162|ref|ZP_08389891.1| ftsJ-like methyltransferase family protein [Sphingomonas sp. S17]
gi|332011769|gb|EGI53845.1| ftsJ-like methyltransferase family protein [Sphingomonas sp. S17]
Length = 231
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAA+KLI+L+ +F FL+ K +DL APGGW QV ++ + ++++ D
Sbjct: 42 GYRSRAAYKLIELDERFGFLRGKKRIIDLGIAPGGWSQVVRRKLPNAAVVGID 94
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ D + N + DA L A A +L GG FV+KVF + L+
Sbjct: 129 DLVMSDMAANTVGHPQTDALRTMGLVETAFAFACDVLSPGGVFVSKVFAGGADSQLVAEM 188
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V KP +SRK S E FVV Q +
Sbjct: 189 KRHFATVKHAKPPSSRKGSVEWFVVAQGF 217
>gi|195175843|ref|XP_002028614.1| GL13168 [Drosophila persimilis]
gi|194105887|gb|EDW27930.1| GL13168 [Drosophila persimilis]
Length = 189
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 479 LVNEYRKKRVEINVRPIRKVVEAKARKKKRQARRMDKMKKKLETLMEAPDVSDAEKARNI 538
L EY++K E+NVRPI+KV+EAKARKK+R +R+ K KK E +ME D S EKA+ +
Sbjct: 61 LTEEYQRKVQELNVRPIKKVMEAKARKKRRSTKRLAKAKKMAEKIMENADASTHEKAKQL 120
Query: 539 R 539
R
Sbjct: 121 R 121
>gi|410722053|ref|ZP_11361368.1| 23S rRNA methylase [Methanobacterium sp. Maddingley MBC34]
gi|410597859|gb|EKQ52466.1| 23S rRNA methylase [Methanobacterium sp. Maddingley MBC34]
Length = 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
YRSRA+FKL+QLNRK++ ++K +DL AAPGGW QVA
Sbjct: 22 YRSRASFKLLQLNRKYKIIKKGDSVIDLGAAPGGWSQVA 60
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T ++ I R L+ K V++ D +P + D L L L+++ ILK
Sbjct: 92 DFTHEETLDEIKRTLQG-KAQVIISDAAPKLSGIKDLDQLRCTDLALTVLQISDTILKYK 150
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G + KVF+ + Y LL K FQ V +TKP +SRK+S E++VV + +
Sbjct: 151 GNIIMKVFQGEGYPELLAEVKTKFQTVKTTKPPSSRKKSGEMYVVGRGF 199
>gi|395782636|ref|ZP_10463022.1| ribosomal RNA large subunit methyltransferase E [Bartonella
rattimassiliensis 15908]
gi|395417373|gb|EJF83712.1| ribosomal RNA large subunit methyltransferase E [Bartonella
rattimassiliensis 15908]
Length = 242
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMAS 235
GYRSRAA+KLI++N +++FL+K + +DL AAPGGW QV ++ + +S
Sbjct: 55 GYRSRAAYKLIEINERYKFLKKGQKVIDLGAAPGGWCQVVERIVGSS 101
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P +G D L A + +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTIGHRQT-DHLRTIYLCEVAADFSLSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
I KQ F++V+ KP ASR ES E++++
Sbjct: 203 TILKQHFKKVYHVKPPASRSESVELYLLA 231
>gi|407770371|ref|ZP_11117741.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407286649|gb|EKF12135.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 268
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAAFKLI++N +F+ L+ VDL AAPGGW QVA
Sbjct: 64 GYRSRAAFKLIEINNQFDLLRPGMRIVDLGAAPGGWTQVA 103
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VD V+ D SP + D L AL A +L GG F+ KVF+ LL
Sbjct: 154 VDAVISDMSPETTGHRQTDHIRIIDLVEHALLFAEEVLAPGGIFIAKVFKGGTENDLLNR 213
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F+ KP ASR ES E +++ +
Sbjct: 214 VKKNFRVSKHAKPPASRPESPEAYLIATGF 243
>gi|341616215|ref|ZP_08703084.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Citromicrobium sp.
JLT1363]
Length = 225
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAAFKLI+L+ KF L+ S+ VDL APGGW QVA + + I+ D
Sbjct: 42 GYRSRAAFKLIELDEKFGILRGSERIVDLGIAPGGWAQVAIKKRPQARIVGID 94
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D D+ AI L D+V+ D + N + D L A A L G
Sbjct: 110 DFMADEAPDAIMEHLGG-APDLVMSDMAANTVGHKQTDHLRTMGLVETAADFAIQTLAPG 168
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F+ KV LL + KQ F+ V KP ASRK S+E +VV Q +
Sbjct: 169 GQFLAKVLAGGTDAELLKLLKQNFKTVKHAKPPASRKGSSEWYVVAQGF 217
>gi|410463691|ref|ZP_11317190.1| 23S rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983189|gb|EKO39579.1| 23S rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 213
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
DVVL D +P + D L AL +A LK GG FV K+F+ D +
Sbjct: 106 DVVLSDMAPKTTGHKFTDQARSLELCEAALSVAVARLKPGGAFVVKIFQGPDSPAFQKGL 165
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+Q F V KP++SR ES EIF V ++AP
Sbjct: 166 RQYFSAVRVAKPKSSRAESKEIFFVATGFVAP 197
>gi|389600050|ref|XP_001561554.2| putative FtsJ-like methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504161|emb|CAM41440.2| putative FtsJ-like methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 457
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 21 KVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K D+VL DG+P+V GM+ + D Y Q L L AL + + +L+ GG F+TK+FR + L+
Sbjct: 165 KADIVLCDGAPDVTGMHEL-DEYLQHHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLI 223
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
+ F++V KP++SR S E F++CQ + P
Sbjct: 224 AKSEIFFEQVRVVKPKSSRNASMESFLLCQGFRMP 258
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKV---CVDLCAAPGGWMQVAKQ 230
+GYR+R+A+KL+Q+ +F L +++ VDLCAAPG W QV Q
Sbjct: 19 EGYRARSAYKLLQIEEEFHILDPAEIRTGAVDLCAAPGSWSQVLAQ 64
>gi|49474969|ref|YP_033010.1| cell division protein ftsJ [Bartonella henselae str. Houston-1]
gi|81648296|sp|Q6G4Z3.1|RLME_BARHE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49237774|emb|CAF26967.1| Cell division protein ftsJ [Bartonella henselae str. Houston-1]
Length = 247
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 35/40 (87%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSRAA+KLI++N++++FL+K + +DL AAPGGW QV+
Sbjct: 55 GYRSRAAYKLIEINQRYKFLKKGQKIIDLGAAPGGWCQVS 94
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 21 KVDVVLHD-GSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLL 79
K DVVL D +P G D L A A +LK GG F+ K F+ +LL
Sbjct: 144 KPDVVLSDMAAPTTGHRQT-DHLRTIYLCEVAADFALSVLKPGGHFLAKAFQGGAENTLL 202
Query: 80 WIFKQLFQRVHSTKPQASRKESAEIFVVC 108
KQ F+ VH KP ASR ES E++++
Sbjct: 203 TTLKQNFKTVHHVKPPASRSESVELYLLA 231
>gi|448315676|ref|ZP_21505317.1| 23S rRNA methyltransferase J [Natronococcus jeotgali DSM 18795]
gi|445611048|gb|ELY64811.1| 23S rRNA methyltransferase J [Natronococcus jeotgali DSM 18795]
Length = 261
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T + R +T + VDVV+ D +PN+ + D L A + A +L G
Sbjct: 90 DMTEQRTRDRVT-DAAGGAVDVVISDMAPNMSGEYSLDQARSLHLARQAFETALDLLDSG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAPA 115
G FV KVF D + + FQ V +T P ASR+ S+E+++V + + A
Sbjct: 149 GNFVAKVFEGPDVDAFRADLEDEFQYVRATAPDASRESSSELYLVAKGRLTTA 201
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYRSRAA+KL QL+ + S VDL AAPGGW++VA + +
Sbjct: 14 EGYRSRAAYKLKQLDDLENVISGSDTVVDLGAAPGGWLEVAAERV 58
>gi|430812992|emb|CCJ29630.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 40 DAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRK 99
D Y Q L AL + + IL+ GG FV K+FR +D + L K F++V KP +SR
Sbjct: 120 DEYIQEQLLFSALNMTTCILRPGGNFVAKIFRGRDISFLYAQLKCFFEKVTCAKPLSSRG 179
Query: 100 ESAEIFVVCQHYIAP 114
S E +VVC+++ P
Sbjct: 180 SSIEAYVVCENFSLP 194
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM 233
G+R+R+AFKLIQL+ +F L+ K +DLCAAPG W QV + ++
Sbjct: 11 GWRARSAFKLIQLDEEFGLLKDVKRVIDLCAAPGSWSQVLSKKLI 55
>gi|196000356|ref|XP_002110046.1| hypothetical protein TRIADDRAFT_53586 [Trichoplax adhaerens]
gi|190588170|gb|EDV28212.1| hypothetical protein TRIADDRAFT_53586 [Trichoplax adhaerens]
Length = 266
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLT--LGALKLASGILK 60
D I L K DV++ D SPNV + +D HQ +T L ALK L
Sbjct: 136 DFGVPSTHTFIQNMLVNSKADVIMSDMSPNVAGSPKFD--HQAIMTQALCALKFTFANLV 193
Query: 61 EGGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQH---YIAPAK 116
G F+ K+F D + KQ + R++ KP ASR ES E + +C+H Y P+K
Sbjct: 194 YNGTFICKMFHGSDEGLFKDMLKQNYHRINEFKPAASRSESNEFYYICRHRKYYRKPSK 252
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYRSR+AFKL+++++KF+ +K + +D+ A+PG W QVA
Sbjct: 66 GYRSRSAFKLLEMDKKFKIFKKGDIVIDIGASPGSWTQVA 105
>gi|433589491|ref|YP_007278987.1| 23S rRNA methylase [Natrinema pellirubrum DSM 15624]
gi|448335634|ref|ZP_21524774.1| 23S rRNA methyltransferase J [Natrinema pellirubrum DSM 15624]
gi|433304271|gb|AGB30083.1| 23S rRNA methylase [Natrinema pellirubrum DSM 15624]
gi|445616473|gb|ELY70098.1| 23S rRNA methyltransferase J [Natrinema pellirubrum DSM 15624]
Length = 257
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T DK R + + VD V+ D +PN+ + D L A + A +L+ G
Sbjct: 86 DMTEDKTRKRVV-DAADGTVDAVISDMAPNMSGEYSLDQARSLHLARQAFETALELLEAG 144
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
G FV KVF D ++ FQ V +T P ASR ES+E++ + + + AP +
Sbjct: 145 GDFVVKVFEGPDVDDFRADVEEEFQYVRATSPDASRDESSEVYFIGKGRLTAPVR 199
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYRSRAA+KL QL+R + + + VDL AAPGGW++VA + +
Sbjct: 13 EGYRSRAAYKLKQLDRLEDVIDRGDTVVDLGAAPGGWLEVAAEEV 57
>gi|46580665|ref|YP_011473.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602033|ref|YP_966433.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
DP4]
gi|387153949|ref|YP_005702885.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
RCH1]
gi|81566318|sp|Q729T9.1|RLME_DESVH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158513904|sp|A1VC40.1|RLME_DESVV RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|46450084|gb|AAS96733.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
vulgaris str. Hildenborough]
gi|120562262|gb|ABM28006.1| 23S rRNA Um-2552 2'-O-methyltransferase [Desulfovibrio vulgaris
DP4]
gi|311234393|gb|ADP87247.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
RCH1]
Length = 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 46/97 (47%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
DVV+ D +P D L L AL +A L +GG FV K+F D L+
Sbjct: 106 DVVISDMAPRTTGTRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAM 165
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHYIAPAKLDT 119
+Q F V S KP++SR ES E F VC Y DT
Sbjct: 166 RQRFSAVKSFKPKSSRAESKETFYVCLGYRGVETSDT 202
>gi|388466819|ref|ZP_10141029.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
synxantha BG33R]
gi|423693612|ref|ZP_17668132.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
fluorescens SS101]
gi|387999590|gb|EIK60919.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
fluorescens SS101]
gi|388010399|gb|EIK71586.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
synxantha BG33R]
Length = 216
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D T DK I + +VD+V+ D +PN+ D L AL LA +L+ G
Sbjct: 96 DFTEDKVLAEILEAVGNSQVDLVISDMAPNMSGLPAVDMPRAMFLCELALDLAGRVLRPG 155
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G F+ KVF+ + + ++LF +V + KP +SR S E +++C+ Y
Sbjct: 156 GDFLVKVFQGEGFDEYHKNIRKLFDKVQTRKPDSSRDRSREQYLLCRGY 204
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV------AKQNMMASSIIHFD 241
GYRSRA++KL+++ K + ++ +DL AAPGGW QV + ++AS I+ D
Sbjct: 27 GYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGWSQVTSRLIGGQGRLIASDILEMD 85
>gi|312136699|ref|YP_004004036.1| 23S rRNA um-2552 2'-o-methyltransferase [Methanothermus fervidus
DSM 2088]
gi|311224418|gb|ADP77274.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanothermus fervidus
DSM 2088]
Length = 203
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 11/84 (13%)
Query: 190 YRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA------KQNMMASSI-----I 238
Y SRAA+KLIQLN+KF+ +++ V +DL AAPGGW QVA K ++A I +
Sbjct: 23 YYSRAAYKLIQLNKKFKLIRRGNVVLDLGAAPGGWSQVAIKLVGSKGKVVAVDIKKMKPL 82
Query: 239 HFDDESVLKHPSTTVEIQECCKDI 262
+++ S ++ T +IQ+ K+I
Sbjct: 83 KYENFSFIQGDFTDPKIQKKIKEI 106
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 14 TRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSK 73
+E+ VDV++ D SP++ D L + +A +LK GG V KVF+
Sbjct: 103 IKEITEGGVDVIISDASPSLSGIKDLDHIRSIELCKSVINIAKNVLKRGGNLVVKVFQGP 162
Query: 74 DYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
++ +LL K F+ V ++KP +S K SAEI+VV ++++ P
Sbjct: 163 EFKNLLDELKNEFKYVKASKPPSSEKSSAEIYVVAKYFVGP 203
>gi|90409010|ref|ZP_01217140.1| hypothetical protein PCNPT3_10771 [Psychromonas sp. CNPT3]
gi|90309895|gb|EAS38050.1| hypothetical protein PCNPT3_10771 [Psychromonas sp. CNPT3]
Length = 222
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
A+ + + K+DVVL D SPN+ N D L AL++ S +LK+ G F+ KVF
Sbjct: 121 ALLKRIGPHKLDVVLSDMSPNMSGNAAMDQPKSMYLVELALEMCSDVLKKDGSFIVKVFM 180
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIA 113
D+ + + K+ F V + KP +SR S E+++V + A
Sbjct: 181 GADFDTFMKEVKKRFNVVKTRKPDSSRARSREVYLVATGFKA 222
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQ 226
G RSRA FKL ++N+K + ++ VDL AAPG W Q
Sbjct: 43 GLRSRAVFKLDEINKKDKLIRSGMTVVDLGAAPGSWSQ 80
>gi|354594103|ref|ZP_09012146.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Commensalibacter intestini A911]
gi|353673214|gb|EHD14910.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Commensalibacter intestini A911]
Length = 236
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+G+RSRAAFKLI+L+ KF+FL+ VDL AAPGGW QVA
Sbjct: 56 QGWRSRAAFKLIELDEKFKFLRPGLKVVDLGAAPGGWSQVA 96
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
K D+V+ D +PN + D LT AL A IL G F+ KVF+ +L
Sbjct: 141 KADLVMSDMAPNTTGHAATDHIRIIDLTKDALIFALDILNLQGIFIAKVFQGGSEKEMLD 200
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F+ V KP ASRKES E++V+ +
Sbjct: 201 TLKKSFKVVKHAKPPASRKESKELYVIATGF 231
>gi|254453503|ref|ZP_05066940.1| ribosomal RNA large subunit methyltransferase J [Octadecabacter
arcticus 238]
gi|198267909|gb|EDY92179.1| ribosomal RNA large subunit methyltransferase J [Octadecabacter
arcticus 238]
Length = 244
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR RAA+K+++LN KF+F K VDL AAPGGW+Q+A
Sbjct: 55 GYRGRAAYKILELNEKFDFFTPGKRVVDLGAAPGGWIQIA 94
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 15 RELKTW---KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
+++K W K D+VL D + + + D L A A +L+EGG FV KV
Sbjct: 140 QKVKEWLGGKADIVLSDMAASASGHKQTDHNRIMALCEAAAYFAFDVLEEGGVFVAKVLA 199
Query: 72 SKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L + K F++V KP ASR +S+E FVV +
Sbjct: 200 GGAEADLQRLLKVNFKKVQYVKPPASRSDSSEKFVVATGF 239
>gi|303390693|ref|XP_003073577.1| tRNA methyltransferase [Encephalitozoon intestinalis ATCC 50506]
gi|303302724|gb|ADM12217.1| ribosomal RNA methyltransferase [Encephalitozoon intestinalis ATCC
50506]
Length = 152
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+D C +I L+ D+V+ DG+P++ D Y Q L + AL + I K G
Sbjct: 10 DITSDSCLRSIVEALEGVLADLVMCDGAPDITGIHEIDEYLQIELLMSALSASLRISKPG 69
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVC 108
FV K + K ++ F++ + V KP+ASR ES E F+ C
Sbjct: 70 SSFVGKCLQGKYTEWMINHFRRFYNGVVLLKPRASRTESMECFLYC 115
>gi|171059499|ref|YP_001791848.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Leptothrix cholodnii
SP-6]
gi|226703309|sp|B1XXG3.1|RLME_LEPCP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|170776944|gb|ACB35083.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Leptothrix cholodnii
SP-6]
Length = 232
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VDVVL D +PN+ V DA L AL+ A LK G V KVF Y+ L+
Sbjct: 132 VDVVLSDMAPNLSGVEVTDAARIANLVELALEFAQSHLKPQGALVCKVFHGSGYSQLVDQ 191
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
FK+ F+ V + KP+ASR SAE F+V
Sbjct: 192 FKRTFRVVKAVKPKASRDRSAETFLV 217
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+K+ +++ ++ +V VDL A PG W Q ++
Sbjct: 31 GYRSRAAYKIKEIDETCGLIRPGQVVVDLGAVPGAWSQYVRR 72
>gi|347526771|ref|YP_004833518.1| ribosomal RNA large subunit methyltransferase E [Sphingobium sp.
SYK-6]
gi|345135452|dbj|BAK65061.1| ribosomal RNA large subunit methyltransferase E [Sphingobium sp.
SYK-6]
Length = 234
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFD 241
GYRSRAA+KLI+L+ KF L+ + VDL APGGW QV ++ + ++I+ D
Sbjct: 42 GYRSRAAYKLIELDEKFGLLKGVRHVVDLGVAPGGWAQVVRKKVPQAAIVGID 94
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D D+ + EL + D+V+ D + N + D L A A LK G
Sbjct: 110 DFMADEAPGRLIAELGS-APDLVMSDMAANTVGHQQTDHLRTMGLVEAAADFAMRTLKPG 168
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV+KVF +LL K F+ V KP +SRK S E FVV Q +
Sbjct: 169 GAFVSKVFAGGTDDALLRQLKAAFRTVKHAKPPSSRKGSVEWFVVAQGF 217
>gi|327400140|ref|YP_004340979.1| ribosomal RNA large subunit methyltransferase E [Archaeoglobus
veneficus SNP6]
gi|327315648|gb|AEA46264.1| Ribosomal RNA large subunit methyltransferase E [Archaeoglobus
veneficus SNP6]
Length = 209
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
KGYRSRAAFKL+Q+N+ F+ ++K +DL A+PGGW QVA
Sbjct: 21 KGYRSRAAFKLLQMNKTFKLIKKGSKVLDLGASPGGWSQVA 61
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 12 AITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFR 71
A++RE D V+ D SP + +W D L A +A +LK GG FV K+F+
Sbjct: 100 AVSREY-----DAVICDASPKITGHWSIDHLISMDLARAAFNIARQVLKPGGNFVVKMFQ 154
Query: 72 SKDYTSLLWIFKQLFQ--RVHSTKPQASRKESAEIFVVCQ-------HYIAP 114
++ + FK F+ ++HS P ASRK SAEI+ + + +YI P
Sbjct: 155 GEEIQKVFNEFKPYFRFKKLHS--PPASRKRSAEIYFIGKRFKKIKTYYIVP 204
>gi|410861593|ref|YP_006976827.1| 23S rRNA methyltransferase J [Alteromonas macleodii AltDE1]
gi|410818855|gb|AFV85472.1| 23S rRNA methyltransferase J [Alteromonas macleodii AltDE1]
Length = 209
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D D A+ + VD+VL D +PN+ N D L AL + +LK G
Sbjct: 99 DFREDAVLDALLNRIGGNTVDIVLSDMAPNLAGNASVDQSRSMYLCELALDMCHQVLKPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF+ + + + KQ F + + KP +SR S E+++V Y
Sbjct: 159 GSFVIKVFQGEGFVEFMNALKQSFTTIKTRKPDSSRSRSREVYLVACGY 207
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
G+RSRA +KL ++ +K + ++ VDL AAPGGW Q+A Q
Sbjct: 30 GWRSRAIYKLEEIQKKDKLIKPGMTLVDLGAAPGGWSQLAAQ 71
>gi|421567246|ref|ZP_16012982.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM3001]
gi|402344257|gb|EJU79398.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis NM3001]
Length = 206
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQYLKTGGSFLVKVFQGAGYQEYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVA 67
>gi|94499454|ref|ZP_01305991.1| 23S rRNA methylase [Bermanella marisrubri]
gi|94428208|gb|EAT13181.1| 23S rRNA methylase [Oceanobacter sp. RED65]
Length = 206
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
D T D+ I +L VD+V+ D +PN+ G+N A + L AL +A +LK+
Sbjct: 96 DFTEDEVFDEIMAKLDNAPVDLVVSDMAPNISGVNAADQASSMYLVEL-ALDMARQVLKQ 154
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF+ Y L + F +V KP ASR S E++VV + +
Sbjct: 155 NGSFVAKVFQGAGYEEYLKDVRSSFNKVLIRKPDASRPRSREVYVVAKGF 204
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA------KQNMMASSIIHFD 241
GYRSRA++KL++L K + ++ V +DL +APGGW QV K ++AS I+ D
Sbjct: 27 GYRSRASYKLLELIEKDKLVRPGMVTMDLGSAPGGWSQVLAPIVGDKGRVIASDILPMD 85
>gi|406596690|ref|YP_006747820.1| 23S rRNA methyltransferase J [Alteromonas macleodii ATCC 27126]
gi|407683647|ref|YP_006798821.1| 23S rRNA methyltransferase J [Alteromonas macleodii str. 'English
Channel 673']
gi|407687631|ref|YP_006802804.1| 23S rRNA methyltransferase J [Alteromonas macleodii str. 'Balearic
Sea AD45']
gi|407699955|ref|YP_006824742.1| 23S rRNA methyltransferase J [Alteromonas macleodii str. 'Black Sea
11']
gi|406374011|gb|AFS37266.1| 23S rRNA methyltransferase J [Alteromonas macleodii ATCC 27126]
gi|407245258|gb|AFT74444.1| 23S rRNA methyltransferase J [Alteromonas macleodii str. 'English
Channel 673']
gi|407249102|gb|AFT78287.1| 23S rRNA methyltransferase J [Alteromonas macleodii str. 'Black Sea
11']
gi|407291011|gb|AFT95323.1| 23S rRNA methyltransferase J [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 209
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D D A+ + VD+VL D +PN+ N D L AL + +LK G
Sbjct: 99 DFREDAVLDALLNRIGGNTVDIVLSDMAPNLAGNASVDQSRSMYLCELALDMCHQVLKPG 158
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF+ + + + KQ F + + KP +SR S E+++V Y
Sbjct: 159 GSFVIKVFQGEGFVEFMNALKQSFTTIKTRKPDSSRSRSREVYLVACGY 207
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
G+RSRA +KL ++ +K + ++ VDL AAPGGW Q+A Q
Sbjct: 30 GWRSRAIYKLEEIQKKDKLIKPGMTLVDLGAAPGGWSQLAAQ 71
>gi|435849150|ref|YP_007311400.1| 23S rRNA methylase [Natronococcus occultus SP4]
gi|433675418|gb|AGB39610.1| 23S rRNA methylase [Natronococcus occultus SP4]
Length = 261
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D+T D+ R +T + +VDVV+ D +PN+ + D L A + A +L G
Sbjct: 90 DMTEDRTRDRVT-DAADGEVDVVISDMAPNMSGEYSLDQARSLHLARQAFETALELLGSG 148
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQ 109
G V KVF D L + FQ V +T P ASR+ S+E++ V +
Sbjct: 149 GNLVVKVFEGPDVDDLRADIEDEFQYVRATAPDASRESSSELYFVAK 195
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFDDESV- 245
+GYRSRAA+KL QL+ + VDL AAPGGW++VA + + ++ D + +
Sbjct: 14 EGYRSRAAYKLKQLDDLENVISGGDTVVDLGAAPGGWLEVAAERVGPQGRVVGVDLQRIK 73
Query: 246 -LKHPSTTVEIQECCKDI 262
L+ P T ++ D+
Sbjct: 74 DLELPGGTDRVETIRGDM 91
>gi|290996969|ref|XP_002681054.1| predicted protein [Naegleria gruberi]
gi|284094677|gb|EFC48310.1| predicted protein [Naegleria gruberi]
Length = 239
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 187 GKGYRSRAAFKLIQLNRKF-EFLQKSKVCVDLCAAPGGWMQVAKQNMMASS-IIHFD--D 242
+GYRSRAAFKL++++ K+ +FL+KSKV +DL AAPG W QVA + M + +I D D
Sbjct: 51 AQGYRSRAAFKLLEIDEKWGKFLEKSKVIIDLGAAPGSWSQVAAEKMKSGGKLITIDILD 110
Query: 243 ESVLKHP 249
LK P
Sbjct: 111 MEPLKSP 117
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
D +L D +PN D L ++ A +LK GG + K+F + +L
Sbjct: 148 ADCLLSDMAPNTSGVKSLDHNRIIFLCNTSIDFAFEVLKPGGCMLMKIFSGPEDATLKND 207
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
KQ F+ V+ KP +SR ES+E++V+ + +
Sbjct: 208 LKQYFENVNFVKPASSRSESSEVYVLAEGF 237
>gi|118575756|ref|YP_875499.1| 23S rRNA methylase [Cenarchaeum symbiosum A]
gi|158512513|sp|A0RV28.1|RLME_CENSY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|118194277|gb|ABK77195.1| 23S rRNA methylase [Cenarchaeum symbiosum A]
Length = 196
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
+ D V+ D SP V NW D Q L A ++ +L G V KVF +
Sbjct: 104 RADAVICDLSPQVSGNWSVDHARQISLNYAAARIMGRVLAPKGNAVFKVFDGEYAAEFRE 163
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVC 108
+F + STKPQASRK+S+E+++VC
Sbjct: 164 HMGHMFSKTKSTKPQASRKQSSELYLVC 191
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
+GYRSRAA+KL +LN+ + + +DL APG WMQVA
Sbjct: 18 QGYRSRAAYKLKELNKAYRIIGAGFTVLDLGCAPGSWMQVA 58
>gi|221066109|ref|ZP_03542214.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
KF-1]
gi|264679344|ref|YP_003279251.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
CNB-2]
gi|299532303|ref|ZP_07045696.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
S44]
gi|220711132|gb|EED66500.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
KF-1]
gi|262209857|gb|ACY33955.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
CNB-2]
gi|298719711|gb|EFI60675.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
S44]
Length = 220
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
+ K DVV+ D +PN+ + D L A+ A +K G V K+F Y
Sbjct: 122 MGGGKADVVVSDMAPNLSGHGATDGARVAVLIEMAVDFAINNMKPEGALVVKLFHGSGYN 181
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
L+ +FKQ F+ V KP+ASR SAEIF+V
Sbjct: 182 ELVDLFKQTFKVVKPIKPKASRDRSAEIFLV 212
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASS 236
GYR+RAA+KL +++ + +Q VDL APG W Q ++ + S
Sbjct: 31 GYRARAAYKLKEIDESLKLIQPGHTVVDLGCAPGAWSQYVRRRLSPSG 78
>gi|337287703|ref|YP_004627175.1| Ribosomal RNA large subunit methyltransferase E
[Thermodesulfobacterium sp. OPB45]
gi|334901441|gb|AEH22247.1| Ribosomal RNA large subunit methyltransferase E
[Thermodesulfobacterium geofontis OPF15]
Length = 202
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 15 RELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKD 74
+ L KVDV+L D +P + D L AL++A LKEGG FV KVF +
Sbjct: 98 KNLGIEKVDVLLSDMAPKTTGDKFGDHVRSVRLAEKALEIAKNYLKEGGSFVVKVFEGEK 157
Query: 75 YTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
L ++ F+ V KP++SRKES EIF++ Q +
Sbjct: 158 IPILKRQIEKYFKSVKFFKPKSSRKESKEIFIIAQGF 194
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMM-ASSIIHFDDESV- 245
KGY +R+ FKL+++ K++ +QK + +DL A+PG W + A + +I D +
Sbjct: 17 KGYPARSVFKLMEIQEKYKIIQKGDIVLDLGASPGSWSKYALSIVGEKGKVIGIDILPIK 76
Query: 246 LKHPSTTVEIQECCKDIRVLGRKDVRNL 273
+ HP+ KD+ L D +NL
Sbjct: 77 ISHPNFYF----LQKDVFELEENDFKNL 100
>gi|433536487|ref|ZP_20492995.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
77221]
gi|432274437|gb|ELL29525.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
77221]
Length = 206
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQARSLYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVA 67
>gi|83644093|ref|YP_432528.1| 23S rRNA methylase [Hahella chejuensis KCTC 2396]
gi|123534482|sp|Q2SMM1.1|RLME_HAHCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83632136|gb|ABC28103.1| 23S rRNA methylase [Hahella chejuensis KCTC 2396]
Length = 206
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
D T D+ AI E+ + VD+V+ D +PN+ GM V D L AL LA +LK+
Sbjct: 96 DFTEDEMLDAILNEVNSRPVDLVISDMAPNMSGMKSV-DIPKAMYLVELALDLACRVLKK 154
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF+ + + +L + F V+ KP ASR S EI++V + +
Sbjct: 155 NGCFVAKVFQGEGFDQILQESRGRFSSVNIRKPDASRARSREIYLVAKGF 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQV 227
G+RSRA++KLI+L+R+ + L+ +DL AAPGGW QV
Sbjct: 27 GFRSRASYKLIELDRQDKLLRPGMTVIDLGAAPGGWSQV 65
>gi|448406809|ref|ZP_21573241.1| 23S rRNA methyltransferase J [Halosimplex carlsbadense 2-9-1]
gi|445676615|gb|ELZ29132.1| 23S rRNA methyltransferase J [Halosimplex carlsbadense 2-9-1]
Length = 261
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
VDVV+ D +PN+ ++ D L A ++A +L GG KVF KD L
Sbjct: 110 VDVVISDMAPNMTGDYDLDHARSVHLARQAFEVADRVLDSGGDLAVKVFDGKDLDDLEAD 169
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVVCQHYI-APAK 116
++ F+ V +P+ASR S+E+++V ++Y+ AP +
Sbjct: 170 IEEQFEYVRQVRPEASRDSSSELYLVAKNYLTAPVR 205
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
+GYR+R+A+KL QL+ VDL AAPGGW+QVA + +
Sbjct: 14 QGYRARSAYKLKQLDETAGLFGPGNTVVDLGAAPGGWLQVAAEEV 58
>gi|149909287|ref|ZP_01897943.1| ribosomal RNA large subunit methyltransferase J [Moritella sp.
PE36]
gi|149807604|gb|EDM67552.1| ribosomal RNA large subunit methyltransferase J [Moritella sp.
PE36]
Length = 214
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
D +K A+ ++ K+DVV+ D +PN+ N D L AL++ +LK
Sbjct: 104 DFRDEKVLSALLAKVGDGKIDVVVSDMAPNMSGNIGVDQPASMYLVELALEMCREVLKPN 163
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF+ + + + + +F V + KP +SR S E+F+V + Y
Sbjct: 164 GSFVVKVFQGEGFEQYMKDVRSMFNVVKTRKPDSSRARSREVFIVAKGY 212
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 188 KGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA------KQNMMASSIIHFD 241
+G RSRA FKL ++ K + LQ VDL AAPGGW Q A K ++A I+ D
Sbjct: 34 QGLRSRATFKLEEIQAKDKLLQPGMNIVDLGAAPGGWSQFAVKHLGDKGRVIACDILPMD 93
>gi|389606113|emb|CCA45026.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis alpha522]
Length = 206
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQARSLYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSWSQVA 67
>gi|103488231|ref|YP_617792.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingopyxis alaskensis
RB2256]
gi|123379512|sp|Q1GPG3.1|RLME_SPHAL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|98978308|gb|ABF54459.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingopyxis alaskensis
RB2256]
Length = 230
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ 230
GYRSRAA+KLI+L+ KF L+KS+ VDL APGGW QV ++
Sbjct: 48 GYRSRAAYKLIELDEKFGLLKKSRAVVDLGIAPGGWSQVVRK 89
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%)
Query: 23 DVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWIF 82
D+V+ D + N + D L A A L GG FV KVF LL +
Sbjct: 135 DLVISDMAANTVGHPQTDHLRTIGLAETAADFAVRNLLPGGAFVAKVFAGGADRELLTLL 194
Query: 83 KQLFQRVHSTKPQASRKESAEIFVVCQHY 111
K+ F V KP ASRK S E++V+ Q +
Sbjct: 195 KRHFTTVKHAKPPASRKGSPELYVIAQGF 223
>gi|387592292|gb|EIJ87316.1| hypothetical protein NEQG_02439 [Nematocida parisii ERTm3]
gi|387596339|gb|EIJ93961.1| hypothetical protein NEPG_01533 [Nematocida parisii ERTm1]
Length = 261
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT+DK I+ + +VD++L DG+P V D Y L A L+ +L
Sbjct: 150 DITSDK-TISEIKNTFGARVDLILCDGAPEVTGLHDLDEYFHSSLITAACSLSRTLLSPS 208
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
G FV KVF D L+ K+ F V KP++SR +S E F +C P
Sbjct: 209 GCFVIKVFTGSDPEILMEDLKEYFSEVLIVKPKSSRIKSKEAFAICHQIRIP 260
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 187 GKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV 245
+GYR+R+A+KL+++ ++ L+ + +DLCAAPG W QV K+ + + ++ D + +
Sbjct: 80 SEGYRARSAYKLLEIIEEYNILENVQSVIDLCAAPGSWSQVIKERLPHAHLLSVDLQDI 138
>gi|410665450|ref|YP_006917821.1| ribosomal RNA large subunit methyltransferase J [Simiduia
agarivorans SA1 = DSM 21679]
gi|409027807|gb|AFV00092.1| ribosomal RNA large subunit methyltransferase J [Simiduia
agarivorans SA1 = DSM 21679]
Length = 207
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNV-GMNWVYDAYHQCCLTLGALKLASGILKE 61
D T DK I + + VDVV+ D +PN+ G+N A + L AL +A +L++
Sbjct: 96 DFTEDKVFDQIMATINSDAVDVVISDMAPNISGVNAADQASSMYLVEL-ALDMARQVLRK 154
Query: 62 GGWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
G FV KVF + Y L ++ F +V KP ASR S E++VV + +
Sbjct: 155 KGSFVAKVFMGEGYDDYLKDVRESFDKVVIRKPAASRARSREVYVVAKGF 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQ------NMMASSIIHFD 241
GYRSRA++KL++LN K + + +V +DL +APGGW QVA + ++AS I+ D
Sbjct: 27 GYRSRASYKLLELNEKDKLFRPHQVVMDLGSAPGGWSQVAMKLVGEHGRVIASDILPMD 85
>gi|261378830|ref|ZP_05983403.1| ribosomal RNA large subunit methyltransferase J [Neisseria cinerea
ATCC 14685]
gi|269144809|gb|EEZ71227.1| ribosomal RNA large subunit methyltransferase J [Neisseria cinerea
ATCC 14685]
Length = 206
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
L +D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y
Sbjct: 111 LNNRPLDLVICDMAPNMSGNAVSDQARSLYLCELALDFASQHLKTGGSFLVKVFQGAGYQ 170
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
+ +++F V + KP+ASR S+EI+++
Sbjct: 171 EYMAAMRKVFGTVQTRKPEASRNRSSEIYLL 201
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ + DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKLIKPGTILADLGSAPGSWSQVA 67
>gi|313668721|ref|YP_004049005.1| cell division protein [Neisseria lactamica 020-06]
gi|421863048|ref|ZP_16294749.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379377|emb|CBX21944.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313006183|emb|CBN87645.1| putative cell division protein [Neisseria lactamica 020-06]
Length = 206
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
L +D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y
Sbjct: 111 LNNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQ 170
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
+ +++F V + KP+ASR S+EI+++
Sbjct: 171 EYMAAMREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVA 67
>gi|254166970|ref|ZP_04873823.1| ribosomal RNA large subunit methyltransferase J [Aciduliprofundum
boonei T469]
gi|197623826|gb|EDY36388.1| ribosomal RNA large subunit methyltransferase J [Aciduliprofundum
boonei T469]
Length = 155
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 21 KVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLW 80
KVDVVL D SP + +D L AL +A +L+E G FV K+F+ L
Sbjct: 59 KVDVVLSDMSPKISGISSWDHARSIDLAERALFIAENVLRERGHFVVKIFQGDMLNGYLK 118
Query: 81 IFKQLFQRVHSTKPQASRKESAEIFVVCQHY 111
+ F+ V KP+AS +ES EI+VVC+ +
Sbjct: 119 KCRDRFEMVKVHKPKASNRESPEIYVVCKRF 149
>gi|337279400|ref|YP_004618872.1| cell division protein ftsJ [Ramlibacter tataouinensis TTB310]
gi|334730477|gb|AEG92853.1| Cell division protein ftsJ [Ramlibacter tataouinensis TTB310]
Length = 220
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
L K DVV+ D +PN+ DA L A++ AS LK G V KVF Y+
Sbjct: 122 LAGRKADVVVSDMAPNLSGVASADAARISHLVELAVEFASAHLKPEGALVAKVFHGSGYS 181
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQHYIAP 114
L+ +FK+ F+ V KP+ASR +S+E F+V AP
Sbjct: 182 QLVQLFKETFRVVKPLKPKASRDKSSETFLVGIGPKAP 219
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 176 PTVLLQHATEVGKGYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNM 232
P V L H +GYR+RAA+KL +++ ++ + VDL APG W Q ++ +
Sbjct: 22 PYVKLAHK----EGYRARAAYKLKEIDEALGLIRPGHLVVDLGCAPGAWSQYVRRRL 74
>gi|421554562|ref|ZP_16000503.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 98008]
gi|402332522|gb|EJU67847.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 98008]
Length = 206
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQDYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSWSQVA 67
>gi|421539978|ref|ZP_15986131.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 93004]
gi|421560976|ref|ZP_16006829.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM2657]
gi|402320262|gb|EJU55753.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 93004]
gi|402339456|gb|EJU74672.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
NM2657]
Length = 206
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQVRSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSII 238
GYR+RAA+KL+++N K + ++ V DL +APG W QVA + +S +
Sbjct: 28 GYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSWSQVAAKLTGSSGAV 77
>gi|421557023|ref|ZP_16002932.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 80179]
gi|402335708|gb|EJU70972.1| ribosomal RNA large subunit methyltransferase E [Neisseria
meningitidis 80179]
Length = 206
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVA 67
>gi|378755530|gb|EHY65556.1| hypothetical protein NERG_01163 [Nematocida sp. 1 ERTm2]
Length = 223
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 3 DITTDKCRIAITRELKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEG 62
DIT D I+ ++ KVD++L DG+P V D Y L + +L+S +L
Sbjct: 111 DITADS-TISQIKDAFKQKVDLILCDGAPEVTGLHDLDEYFHSSLIQASCRLSSQLLSPA 169
Query: 63 GWFVTKVFRSKDYTSLLWIFKQLFQRVHSTKPQASRKESAEIFVVCQ 109
G F+TKVF L+ K+ F V KP++SR +S E F +C
Sbjct: 170 GCFITKVFTGDSPNILMEDLKEYFTDVIIVKPKSSRIKSKEAFAICH 216
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVAKQNMMASSIIHFDDESV 245
GYR+R+A+KL+++ ++ L +DLCAAPG W QV K+ + + ++ D + +
Sbjct: 43 GYRARSAYKLLEIIEEYNVLVGVSTVIDLCAAPGSWSQVIKERLPDAKLLSVDLQDI 99
>gi|59800827|ref|YP_207539.1| hypothetical protein NGO0383 [Neisseria gonorrhoeae FA 1090]
gi|240013700|ref|ZP_04720613.1| hypothetical protein NgonD_03460 [Neisseria gonorrhoeae DGI18]
gi|240016140|ref|ZP_04722680.1| hypothetical protein NgonFA_03058 [Neisseria gonorrhoeae FA6140]
gi|240120769|ref|ZP_04733731.1| hypothetical protein NgonPI_03133 [Neisseria gonorrhoeae PID24-1]
gi|268603220|ref|ZP_06137387.1| cell division protein [Neisseria gonorrhoeae PID1]
gi|293399468|ref|ZP_06643621.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae F62]
gi|75356299|sp|Q5F9L0.1|RLME_NEIG1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|59717722|gb|AAW89127.1| putative methyltranferase involved in cell division [Neisseria
gonorrhoeae FA 1090]
gi|268587351|gb|EEZ52027.1| cell division protein [Neisseria gonorrhoeae PID1]
gi|291610037|gb|EFF39159.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae F62]
Length = 206
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 22 VDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYTSLLWI 81
+D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y +
Sbjct: 116 LDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAA 175
Query: 82 FKQLFQRVHSTKPQASRKESAEIFVV 107
+++F V + KP+ASR S+EI+++
Sbjct: 176 MREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKIIKPGTVLADLGSAPGSWSQVA 67
>gi|261400135|ref|ZP_05986260.1| ribosomal RNA large subunit methyltransferase J [Neisseria
lactamica ATCC 23970]
gi|269210130|gb|EEZ76585.1| ribosomal RNA large subunit methyltransferase J [Neisseria
lactamica ATCC 23970]
Length = 206
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 17 LKTWKVDVVLHDGSPNVGMNWVYDAYHQCCLTLGALKLASGILKEGGWFVTKVFRSKDYT 76
L +D+V+ D +PN+ N V D L AL AS LK GG F+ KVF+ Y
Sbjct: 111 LNNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQ 170
Query: 77 SLLWIFKQLFQRVHSTKPQASRKESAEIFVV 107
+ +++F V + KP+ASR S+EI+++
Sbjct: 171 EYMAAMREIFGTVQTRKPEASRNRSSEIYLL 201
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 189 GYRSRAAFKLIQLNRKFEFLQKSKVCVDLCAAPGGWMQVA 228
GYR+RAA+KL+++N K + ++ V DL +APG W QVA
Sbjct: 28 GYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVA 67
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,533,014,794
Number of Sequences: 23463169
Number of extensions: 384972519
Number of successful extensions: 4991849
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12986
Number of HSP's successfully gapped in prelim test: 40240
Number of HSP's that attempted gapping in prelim test: 3554601
Number of HSP's gapped (non-prelim): 692411
length of query: 547
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 399
effective length of database: 8,886,646,355
effective search space: 3545771895645
effective search space used: 3545771895645
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)