Query psy3135
Match_columns 229
No_of_seqs 115 out of 1083
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 17:22:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w66_A Lipoyltransferase; lipo 100.0 9.2E-61 3.1E-65 411.3 21.9 200 3-217 12-219 (232)
2 2qhs_A Lipoyltransferase; glob 100.0 4.7E-58 1.6E-62 395.7 22.9 212 3-223 21-237 (237)
3 2p0l_A Lipoate-protein ligase 100.0 2.4E-42 8E-47 305.3 21.9 214 3-223 11-258 (288)
4 2p5i_A BH3822 protein; PFAM030 100.0 2E-42 6.8E-47 305.7 21.1 209 4-221 14-256 (288)
5 2c8m_A Lipoate-protein ligase 100.0 5.2E-42 1.8E-46 299.0 18.5 207 2-221 1-232 (262)
6 1vqz_A Lipoate-protein ligase, 100.0 4.4E-40 1.5E-44 297.0 21.3 200 4-214 12-224 (341)
7 3a7r_A Lipoate-protein ligase 100.0 3E-39 1E-43 291.1 19.9 205 4-220 2-220 (337)
8 2e5a_A Lipoyltransferase 1; li 100.0 2E-37 6.7E-42 280.3 18.7 201 5-215 5-217 (347)
9 2dxu_A Biotin--[acetyl-COA-car 98.6 1.6E-07 5.6E-12 80.1 10.6 118 81-212 47-169 (235)
10 2eay_A Biotin [acetyl-COA-carb 98.6 3E-07 1E-11 78.3 12.2 123 80-212 38-166 (233)
11 3rkx_A Biotin-[acetyl-COA-carb 98.6 6E-07 2E-11 80.0 13.2 125 81-212 121-257 (323)
12 3rux_A BIRA bifunctional prote 98.5 4.8E-07 1.6E-11 78.7 10.8 121 81-212 72-203 (270)
13 2ej9_A Putative biotin ligase; 98.5 9.4E-07 3.2E-11 75.3 11.4 124 80-212 38-168 (237)
14 3bfm_A Biotin protein ligase-l 98.3 1.3E-05 4.4E-10 68.0 13.8 144 48-212 8-172 (235)
15 1bia_A BIRA bifunctional prote 98.3 7.9E-06 2.7E-10 72.4 12.1 122 82-212 118-251 (321)
16 2ddz_A 190AA long hypothetical 95.8 0.082 2.8E-06 43.1 10.0 84 113-212 92-177 (190)
17 2bps_A YUKD protein; ubiquitin 24.7 28 0.00094 24.2 1.3 40 157-207 1-40 (81)
No 1
>1w66_A Lipoyltransferase; lipoate-protein ligase B, lipoic acid, acyltransferase, mycobacterium tuberculosis structural proteomics project; HET: DKA; 1.08A {Mycobacterium tuberculosis} SCOP: d.104.1.3
Probab=100.00 E-value=9.2e-61 Score=411.28 Aligned_cols=200 Identities=39% Similarity=0.606 Sum_probs=185.7
Q ss_pred ceeEEEEcCCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccCCccccchhhHhhhhhCCCcEEEecc
Q psy3135 3 KQVQLVRLGLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNR 82 (229)
Q Consensus 3 ~~~~v~~~G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~~~~~~~~~~~~~l~~~gi~v~r~~r 82 (229)
..+.++++|++||.++|++|+.+++.+.+ ..+++|||||||||||+|++|+.. .+...|++|+||+|
T Consensus 12 ~~~~~~~lg~~~Y~~a~~~q~~l~~~~~~------~~~d~l~l~eh~pv~TiG~~q~~~-------~l~~~gi~Vvr~~r 78 (232)
T 1w66_A 12 SAIDVRQLGTVDYRTAWQLQRELADARVA------GGADTLLLLEHPAVYTAGRRTETH-------ERPIDGTPVVDTDR 78 (232)
T ss_dssp SCCEEEEEEECCHHHHHHHHHHHHHHHHT------TCCCEEEEEECCSEEEECTTCCGG-------GSCTTCCCCEECSS
T ss_pred ceEEEEeCCCcCHHHHHHHHHHHHHHhhC------CCCCEEEEEecCCEEEeCCCCChh-------hhcccCCeEEEecC
Confidence 46899999999999999999999999875 367999999999999999999332 24456999999999
Q ss_pred CCceeEecCCCeEEEEeeecCCCCCCHHHHHHHHHhh-----cccCceEEeeCCCceEEeC---CCCceeeeceeeeCcE
Q psy3135 83 GGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT-----QEFSLNAGLIPKYTGVFLD---DEYKVCAIGVHSSLYI 154 (229)
Q Consensus 83 GGg~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~le~~-----~~~gi~a~~~~~~~gv~v~---~~rKIasiG~~i~~~i 154 (229)
||++|||||||+|+|||+++++ +.++++|++.||++ ++|||+|++.+++||||++ + |||||+|+++++|+
T Consensus 79 GG~~tYHgPGQlv~Y~Il~l~~-~~~v~~~v~~le~~vI~~L~~~Gi~a~~~~g~~gV~v~~~~~-rKIaaig~r~~~~v 156 (232)
T 1w66_A 79 GGKITWHGPGQLVGYPIIGLAE-PLDVVNYVRRLEESLIQVCADLGLHAGRVDGRSGVWLPGRPA-RKVAAIGVRVSRAT 156 (232)
T ss_dssp SSSEEEECTTEEEEEEECBBCS-SCCHHHHHHHHHHHHHHHHHHTTCCCEEETTEEEEEECSSSC-EEEEEEEEEEETTE
T ss_pred CCceEEECCCCeEEEEEEECCC-CCCHHHHHHHHHHHHHHHHHHcCCCeEecCCCCeEEecCCCC-CEEEEeeeeeeCCE
Confidence 9999999999999999999988 78999999999988 8999999998988999999 8 99999999999999
Q ss_pred EEEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhcccccc
Q psy3135 155 THHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFECECSE 217 (229)
Q Consensus 155 t~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~~~~~~ 217 (229)
|+||++|||++||++|..|+|||+.+++||||+++++.+++++++++.|+++|++.|+.+...
T Consensus 157 t~HG~aLNv~~dL~~f~~I~pcgi~~k~vtSl~~~lg~~~~~~ev~~~l~~~f~~~~~~~~~~ 219 (232)
T 1w66_A 157 TLHGFALNCDCDLAAFTAIVPCGISDAAVTSLSAELGRTVTVDEVRATVAAAVCAALDGVLPV 219 (232)
T ss_dssp EEEEEEEESSCCCGGGGGSCGGGCSSSEECCHHHHHTSCCCHHHHHHHHHHHHHHHHTTCCC-
T ss_pred EEcceEEecCcChHHhcCccccccCCCceeeeHHHhCCCCCHHHHHHHHHHHHHHHhCccccc
Confidence 999999999999999999999999999999999889999999999999999999999987543
No 2
>2qhs_A Lipoyltransferase; globular protein; HET: OCA; 1.50A {Thermus thermophilus} PDB: 2qht_A 2qhu_A 2qhv_A
Probab=100.00 E-value=4.7e-58 Score=395.73 Aligned_cols=212 Identities=35% Similarity=0.564 Sum_probs=193.6
Q ss_pred ceeEEEEcCCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccCCccccchhhHhhhhhCCCcEEEecc
Q psy3135 3 KQVQLVRLGLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNR 82 (229)
Q Consensus 3 ~~~~v~~~G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~~~~~~~~~~~~~l~~~gi~v~r~~r 82 (229)
+.+.++++|++||+++|++|+.+++.+.+ +..+++||||||||+||+|++|+..+.+++.++|++.||+|+||+|
T Consensus 21 ~~~~~~~~g~~~y~~~~a~~e~l~~~~~~-----g~~~~~L~l~eh~p~~tlG~~q~~~~~~~~~~~l~~~gi~vvrr~r 95 (237)
T 2qhs_A 21 MEFLVEDLGLVPYGEAWAYQKRVHREVVA-----GNRPPTLLLLEHPRVITLGRKATGENLLFPESWYRENGFELYWVER 95 (237)
T ss_dssp CEEEEEEEEECCHHHHHHHHHHHHHHHHT-----TCSCCEEEEEECSSEEEECTTCCGGGBSSCHHHHHHTTCEEEECCS
T ss_pred CeEEEEeCCCcCHHHHHHHHHHHHHHHhc-----CCCCCEEEEEeCCCEEEeCCCCCchhcccCHHHHHhcCCeEEEEcC
Confidence 57899999999999999999999999875 6678999999999999999999554445789999999999999999
Q ss_pred CCceeEecCCCeEEEEeeecCCCCCCHHHHHHHHHhh-----cccCceEEeeCCCceEEeCCCCceeeeceeeeCcEEEE
Q psy3135 83 GGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT-----QEFSLNAGLIPKYTGVFLDDEYKVCAIGVHSSLYITHH 157 (229)
Q Consensus 83 GGg~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~le~~-----~~~gi~a~~~~~~~gv~v~~~rKIasiG~~i~~~it~H 157 (229)
||++|||||||+++|||+++++ ++++|++.|+++ +.|||+|++.++++||||++ |||||+|+++++|+++|
T Consensus 96 GGgavyH~pGqlv~Y~i~~~~~---~~~~~~~~l~~~ii~~L~~lGi~a~~~~g~~dv~v~g-rKIag~g~~~~~~~~~h 171 (237)
T 2qhs_A 96 GGDVTYHGPGQLVGYPIFPVGR---EVRRFLRQIEEAIVRVAAGYGISAYPTPGYAGVWVGE-DKLCAIGVAVKEGVSFH 171 (237)
T ss_dssp SSSEEEECTTEEEEEEECCCTT---CHHHHHHHHHHHHHHHHHHTTCCCBCCSSSSSEEETT-EEEEEEEEEEETTEEEE
T ss_pred CCEEEEECCCCEEEEEEEECCc---CHHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCEEECC-cEEEEEeEEeeCCeEEE
Confidence 9999999999999999999976 899999999887 88999999988889999999 99999999999999999
Q ss_pred eeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhccccccccchhH
Q psy3135 158 GLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFECECSEVELDEE 223 (229)
Q Consensus 158 G~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~~~~~~~~~~~~ 223 (229)
|++||+++|++.|..|+|||+.++.||||+++++.+++++++++.++++|++.|+.+..+.+++++
T Consensus 172 g~aLnv~~dl~~f~~i~p~g~~~~~vtSl~~~l~~~~~~~ev~~~l~~~f~~~~~~~~~~~~lt~~ 237 (237)
T 2qhs_A 172 GFALNVNTDLNDFTVIVPCGLKGKGVTSLEKLLGRKVPMEEAKARVVAAFAEVFGLRPVEGSVHEA 237 (237)
T ss_dssp EEEEESSCCGGGGGGBCCCSSCCSEECCHHHHHTSCCCHHHHHHHHHHHHHHHHTCEEC-------
T ss_pred eEEEecccChHHhcCcCcCccCCCcEEeHHHhhCCCCCHHHHHHHHHHHHHHHhCCccccCCCCCC
Confidence 999999999999999999999999999999989999999999999999999999999888877764
No 3
>2p0l_A Lipoate-protein ligase A; PFAM, lopoate-protein ligase A, 10425H, structural genomics, structure initiative, PSI-2; 2.04A {Streptococcus agalactiae} SCOP: d.104.1.3
Probab=100.00 E-value=2.4e-42 Score=305.29 Aligned_cols=214 Identities=13% Similarity=0.028 Sum_probs=182.8
Q ss_pred ceeEEEEc---CCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccC--CccccchhhHhhhhhCCCcE
Q psy3135 3 KQVQLVRL---GLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIR--SLKEYDENLELKLNKLGADF 77 (229)
Q Consensus 3 ~~~~v~~~---G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~--~~~~~~~~~~~~l~~~gi~v 77 (229)
..++++++ |..++..+|++|+.+++...+ +..+++|+||+|||+||+|++ | +.+.+++.++|++.||+|
T Consensus 11 ~~~r~i~~~~~~~~d~~~nlAlde~Ll~~~~~-----g~~~~~L~l~~~~p~vtlG~~~~q-~~~~e~~~~~~~~~gi~v 84 (288)
T 2p0l_A 11 LPVSIFKDYVTDAQDAEKPFIWTEVFLREINR-----SNQEIILHIWPMTKTVILGMLDRE-LPHLELAKKEIISRGYEP 84 (288)
T ss_dssp SCEEEEECCBCSGGGTTHHHHHHHHHHHHHHH-----SCSCEEEEECCBSSEEEECTTGGG-CTTHHHHHHHHHTTTCEE
T ss_pred CcEEEEECCCCCCCCHHHHHHHHHHHHHhhhc-----CCCCCEEEEecCCCEEEECCCCCC-CcchhhhHHHHHHCCCEE
Confidence 45888887 789999999999999999876 567899999999999999999 6 666677889999999999
Q ss_pred EEeccCCceeEecCCCeEEEEeeecC-CCCCCHHHHHHHHHhh-----cccCceEEee-------CCCceEEeCCCCcee
Q psy3135 78 YKTNRGGLITFHGPGQLVAYPIINLK-HFTPSIKWFVQSIEQT-----QEFSLNAGLI-------PKYTGVFLDDEYKVC 144 (229)
Q Consensus 78 ~r~~rGGg~tyHgpGQLv~Y~il~l~-~~~~~~~~~v~~le~~-----~~~gi~a~~~-------~~~~gv~v~~~rKIa 144 (229)
+||+|||++|||||||++.++|++.+ ..+.+++++++.++++ +.|||++++. ++++||||++ +|||
T Consensus 85 vRR~sGGgaVyHdpG~l~ysli~~~~~~~~~~i~~~y~~l~~~ii~aL~~lGi~a~~~~~~~~~c~g~~Dl~v~g-rKI~ 163 (288)
T 2p0l_A 85 VVRNFGGLAVVADEGILNFSLVIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSING-KKFA 163 (288)
T ss_dssp EECTTCCSCEEESTTEEEEEEEEESCC---CCHHHHHHHHHHHHHHHTTTSCSCCEECCCTTSSSCCTTCEEETT-EEEE
T ss_pred EEEcCCCCeEEECCCcEEEEEEEcCccccCCCHHHHHHHHHHHHHHHHHHcCCcEEEccccCCCCCCCccEEECC-EEEE
Confidence 99999999999999986444444776 4567899888888877 8899998873 7789999999 9999
Q ss_pred eeceeeeCcEEEEeeeeecCCCccc--------cccc--------cCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHH
Q psy3135 145 AIGVHSSLYITHHGLAINCDTDLTW--------FNHI--------TPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFE 208 (229)
Q Consensus 145 siG~~i~~~it~HG~alNv~~dl~~--------f~~I--------~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~ 208 (229)
|+|+++++++++||++||+++|++. |..+ .+||+.+..||||+++++.++++++++++|+++|+
T Consensus 164 G~Aqr~~~~~~lhh~sl~v~~dl~~~~~~l~~~~~~~l~~~~~k~~~~gi~~~~VtsL~~~l~~~~~~~~v~~~l~~~f~ 243 (288)
T 2p0l_A 164 GLAQRRIKNGIAVSIYLSVCGDQKGRSQMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLK 243 (288)
T ss_dssp EEEEEEETTEEEEEEEEECSSCHHHHHHHHHHHHHHHHTTTCCSSCCCCCCTTSBCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred EEeEEEeCCEEEEEEEEEecCCHHHHHHHHHHHHHHhcCCccccccccccchhheeeHHHHcCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999987 6554 45899889999999988888999999999999999
Q ss_pred HhhccccccccchhH
Q psy3135 209 SVFECECSEVELDEE 223 (229)
Q Consensus 209 ~~f~~~~~~~~~~~~ 223 (229)
+.|+.+..+...-++
T Consensus 244 ~~~~~t~~e~~~~~~ 258 (288)
T 2p0l_A 244 QVGFNDRLLMIRPDL 258 (288)
T ss_dssp HHTCCEEECCCCHHH
T ss_pred HhcCCCHHHHHHHHH
Confidence 999984444443333
No 4
>2p5i_A BH3822 protein; PFAM03099, structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.21A {Bacillus halodurans c-125} SCOP: d.104.1.3
Probab=100.00 E-value=2e-42 Score=305.71 Aligned_cols=209 Identities=14% Similarity=0.066 Sum_probs=177.8
Q ss_pred eeEEEEcCC----CChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccC--CccccchhhHhhhhhCCCcE
Q psy3135 4 QVQLVRLGL----VSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIR--SLKEYDENLELKLNKLGADF 77 (229)
Q Consensus 4 ~~~v~~~G~----~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~--~~~~~~~~~~~~l~~~gi~v 77 (229)
.+++++.+. .++..+|++|+.+++...+ +..+++|+||+|||+||+|++ | +.+.+++.+++++.||+|
T Consensus 14 ~~~~i~~~~~~~~~d~~~nlA~de~Ll~~~~~-----g~~~~~l~l~~~~p~vtlG~~~~q-~~~~e~~~~~~~~~gi~v 87 (288)
T 2p5i_A 14 PWRFLDHTSFGPTFQALQSFAYDDTLCTSIGK-----SQSPPTLRAWVHHNTVVLGIQDSR-LPQIKAGIEALKGFQHDV 87 (288)
T ss_dssp CCEEEEESSCCTTSCHHHHHHHHHHHHHHHTT-----TSSCCEEEEECCSSEEEEEHHHHT-STTHHHHHHHHHHTTCEE
T ss_pred cEEEEECCCcCCCCCHHHhHHHHHHHHHHhhc-----CCCCCEEEEecCCCEEEECCCcCC-CccHhhhHHHHHHcCCeE
Confidence 688999887 6899999999999999865 567899999999999999999 5 566667888999999999
Q ss_pred EEeccCCceeEecCCCeEEEEeeecCCCCCCHHHHHHHHHhh-----cccCceEEe-------eCCCceEEeCCCCceee
Q psy3135 78 YKTNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT-----QEFSLNAGL-------IPKYTGVFLDDEYKVCA 145 (229)
Q Consensus 78 ~r~~rGGg~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~le~~-----~~~gi~a~~-------~~~~~gv~v~~~rKIas 145 (229)
+||+|||++|||||||+ .|+++..+..+.+++++++.++++ +.|||++++ .++++||||++ +||||
T Consensus 88 vRR~sGGgaVyHdpG~l-~ysli~~~~~~~~v~~~y~~l~~~ii~~L~~lGi~a~~~~~~~~~c~g~~dl~v~g-rKI~G 165 (288)
T 2p5i_A 88 IVRNSGGLAVVLDSGIL-NLSLVLKEEKGFSIDDGYELMYELICSMFQDHREQIEAREIVGSYCPGSYDLSIDG-KKFAG 165 (288)
T ss_dssp EEESSCCCCEEECTTEE-EEEEEEECCTTCCHHHHHHHHHHHHHHHTC---CCCEECCCTTSSSCCTTCEEETT-EEEEE
T ss_pred EEEcCCCceEEECCCcE-EEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHcCCcEEEeccccCCCCCCccEEECC-EEEEE
Confidence 99999999999999997 677775555567899998888877 889999887 37789999999 99999
Q ss_pred eceeeeCcEEEEeeeeecCCCccc--------cccc-cC-------CCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHH
Q psy3135 146 IGVHSSLYITHHGLAINCDTDLTW--------FNHI-TP-------CGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFES 209 (229)
Q Consensus 146 iG~~i~~~it~HG~alNv~~dl~~--------f~~I-~p-------cGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~ 209 (229)
+|+++++++++||++||+++|++. |..+ .| ||+.+..||||+++++.++++++++++|+++|++
T Consensus 166 ~Aqr~~~~~~lhh~~l~v~~dl~~~~~~l~~f~~~~l~~~~~ki~~~gi~~~~VtsL~~~l~~~~~~~~v~~~l~~~f~~ 245 (288)
T 2p5i_A 166 ISQRRIRGGVAVQIYLCVSGSGAERAKMIRTFYDKAVAGQPTKFVYPRIKPETMASLSELLGQPHNVSDVLLKALMTLQQ 245 (288)
T ss_dssp EEEEEETTEEEEEEEEECSSCHHHHHHHHHHHHHHHHTTSCCSSCCCCCCGGGBCCHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCEEEEEEEEEecCCHHHHHHHHHHHHHHhhcCccccccccccchhhceeHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999987 7653 44 5888889999999889899999999999999998
Q ss_pred hhccccccccch
Q psy3135 210 VFECECSEVELD 221 (229)
Q Consensus 210 ~f~~~~~~~~~~ 221 (229)
. +.+....+++
T Consensus 246 ~-~~~~~~~~lt 256 (288)
T 2p5i_A 246 H-GASLLTESLS 256 (288)
T ss_dssp T-TCCCEECCCC
T ss_pred h-CCCceecCCC
Confidence 5 4344434443
No 5
>2c8m_A Lipoate-protein ligase A; lipoylation; HET: LPA; 1.89A {Thermoplasma acidophilum} SCOP: d.104.1.3 PDB: 2art_A* 2aru_A* 2c7i_A 2ars_A* 3r07_A
Probab=100.00 E-value=5.2e-42 Score=299.04 Aligned_cols=207 Identities=15% Similarity=0.156 Sum_probs=167.6
Q ss_pred CceeEEEEcCCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccCCccccchhhHhhhhhCCCcEEEec
Q psy3135 2 TKQVQLVRLGLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTN 81 (229)
Q Consensus 2 ~~~~~v~~~G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~~~~~~~~~~~~~l~~~gi~v~r~~ 81 (229)
|..+++++.+..++..+|++|+.+++.... +. +++|+||+|||+||+|++| +.+.+++.++|++.||+|+||+
T Consensus 1 m~~~~~i~~~~~~~~~nlA~ee~Ll~~~~~-----~~-~~~l~l~~~~p~v~lG~~q-~~~~e~~~~~~~~~gi~vvrR~ 73 (262)
T 2c8m_A 1 MEGRLLLLETPGNTRMSLAYDEAIYRSFQY-----GD-KPILRFYRHDRSVIIGYFQ-VAEEEVDLDYMKKNGIMLARRY 73 (262)
T ss_dssp CEEEEECCCCTTCHHHHHHHHHHHHHHCCT-----TS-CCEEEEECCSSEEEECTTC-CHHHHSCHHHHHHTTCEEEECS
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHcccC-----CC-CcEEEEEcCCCEEEECCCC-ChhHHhHHHHHHhcCCcEEEEC
Confidence 356788899999999999999999998754 33 6999999999999999999 6666778889999999999999
Q ss_pred cCCceeEecCCCeEEEEeeecCCCCCCHHHHHHHHHhh-----cccCc----------eEEeeCCCceEEeCCCCceeee
Q psy3135 82 RGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT-----QEFSL----------NAGLIPKYTGVFLDDEYKVCAI 146 (229)
Q Consensus 82 rGGg~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~le~~-----~~~gi----------~a~~~~~~~gv~v~~~rKIasi 146 (229)
|||++||||||||+.++|++... .++++..+.++++ +.||| .+++. +++|||+++ +||||+
T Consensus 74 sGGgavyhd~G~l~ys~i~~~~~--~~~~~~y~~l~~~ii~~l~~lGi~~~~~~~~~~~a~~~-g~~dv~v~g-~Ki~G~ 149 (262)
T 2c8m_A 74 TGGGAVYHDLGDLNFSVVRSSDD--MDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVN-KKTDIMAGE-KKIMGA 149 (262)
T ss_dssp SCSCCEEECTTEEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHHTTCCCEECCBCCTTSSSS-BTTSEEETT-EEEEEE
T ss_pred CCCceEEeCCCcEEEEEEEcCCC--CCHHHHHHHHHHHHHHHHHHcCCCcccccccCCcceEC-CcCcEEECC-eEEEEe
Confidence 99999999999995555556543 5777544666666 88999 66664 669999999 999999
Q ss_pred ceeeeCcEEEEeeeeecCCCccccc---cccCCCCCCCC-------eeeechhcCCCCCHHHHHHHHHHHHHHhhccccc
Q psy3135 147 GVHSSLYITHHGLAINCDTDLTWFN---HITPCGIKDKQ-------VTSLSKHLSKDITVDTVVPLFKKHFESVFECECS 216 (229)
Q Consensus 147 G~~i~~~it~HG~alNv~~dl~~f~---~I~pcGl~~~~-------vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~~~~~ 216 (229)
|+++++++++||++||+++|++.|. .+.|||+.++. ||||++++ ++++++++++|.++|++.|+.+..
T Consensus 150 aqr~~~~~~lhhgtllv~~d~~~~~~~l~~~~~~~~~~g~~s~~~~vtsL~~~~--~~~~~~v~~~l~~~~~~~~~~~~~ 227 (262)
T 2c8m_A 150 AGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFV--DVSIDEVRNALIRGFSETLHIDFR 227 (262)
T ss_dssp EEEEETTEEEEEEEEESSCCHHHHHHHTC---------------CCBCCGGGTS--CCCHHHHHHHHHHHHHHHHTCEEE
T ss_pred eeEEeCCEEEEEEEEEecCCHHHHHHHhCCChhhhhhhccccHHhhhccHHHhc--CCCHHHHHHHHHHHHHHHhCCCce
Confidence 9999999999999999999998775 45689998877 99999865 899999999999999999987664
Q ss_pred cccch
Q psy3135 217 EVELD 221 (229)
Q Consensus 217 ~~~~~ 221 (229)
..+++
T Consensus 228 ~~~lt 232 (262)
T 2c8m_A 228 EDTIT 232 (262)
T ss_dssp ECCCC
T ss_pred ecCCC
Confidence 44443
No 6
>1vqz_A Lipoate-protein ligase, putative; class II AARS and biotin synthetases fold, SUFE/NIFU fold, S genomics; HET: MSE; 1.99A {Streptococcus pneumoniae} SCOP: d.224.1.3 d.104.1.3
Probab=100.00 E-value=4.4e-40 Score=297.01 Aligned_cols=200 Identities=19% Similarity=0.225 Sum_probs=172.9
Q ss_pred eeEEEEcCCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccCCccccchhhHhhhhhCCCcEEEeccC
Q psy3135 4 QVQLVRLGLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRG 83 (229)
Q Consensus 4 ~~~v~~~G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~~~~~~~~~~~~~l~~~gi~v~r~~rG 83 (229)
.+..+-.+..+-...+++++.+++... ..+++|+||+|||+||+|++| +.+.+++.+++++.||+|+||.||
T Consensus 12 ~~~~~~~~~~d~~~nlAlee~Ll~~~~-------~~~~~L~l~~~~p~v~iG~~q-~~~~ev~~~~~~~~gi~vvRR~sG 83 (341)
T 1vqz_A 12 HMKYIINHSNDTAFNIALEEYAFKHLL-------DEDQIFLLWINKPSIIVGRHQ-NTIEEINRDYVRENGIEVVRRISG 83 (341)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHHHHCT-------TCSEEEEEECCSSEEEECTTC-CGGGTBCHHHHHHHTCEEEECSSC
T ss_pred ceeEEeCCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEcCCCEEEECCCC-ChhhhhCHHHHHHcCCcEEEECCC
Confidence 367777888899999999999998764 257899999999999999999 667778899999999999999999
Q ss_pred CceeEecCCCeEEEEeeecCCCCCC--HHHHHHHHHhh-cccCceEEeeCCCceEEeCCCCceeeeceeeeCcEEEEeee
Q psy3135 84 GLITFHGPGQLVAYPIINLKHFTPS--IKWFVQSIEQT-QEFSLNAGLIPKYTGVFLDDEYKVCAIGVHSSLYITHHGLA 160 (229)
Q Consensus 84 Gg~tyHgpGQLv~Y~il~l~~~~~~--~~~~v~~le~~-~~~gi~a~~~~~~~gv~v~~~rKIasiG~~i~~~it~HG~a 160 (229)
||+|||||||+ .|+++..+....+ .+.+.+.+.++ +.+||+|++. +++||||++ +||||+|+++++++++||++
T Consensus 84 GgaVyHd~G~l-~ys~i~~~~~~~~~~y~~l~~~ii~aL~~lGi~a~~~-gr~Di~v~g-rKIsG~Aqr~~~~~~lhhgt 160 (341)
T 1vqz_A 84 GGAVYHDLNNL-NYTIISKEDENKAFDFKSFSTPVINTLAQLGVKAEFT-GRNDLEIDG-KKFCGNAQAYINGRIMHHGC 160 (341)
T ss_dssp SCCEEECTTEE-EEEEEEECCTTCCCSHHHHHHHHHHHHHHTTCCEEEE-TTTEEEETT-EEEEEEEEEEETTEEEEEEE
T ss_pred CCeEEECCCce-EEEEEEcCcccCCccHHHHHHHHHHHHHHcCCeEEEC-CCCCEEEeC-EEEEEEEEEEECCEEEEEEE
Confidence 99999999996 8888877654323 33334444444 8999999885 569999999 99999999999999999999
Q ss_pred eecCCCccccc---cccCCCCCCCC-------eeeechhcCCCCCHHHHHHHHHHHHHHhhccc
Q psy3135 161 INCDTDLTWFN---HITPCGIKDKQ-------VTSLSKHLSKDITVDTVVPLFKKHFESVFECE 214 (229)
Q Consensus 161 lNv~~dl~~f~---~I~pcGl~~~~-------vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~~~ 214 (229)
||+++|++.|. .+.|||+.++. ||||+++++.++++++++++|.++|++.|+..
T Consensus 161 llvd~Dl~~~~~~L~~~~~k~~~kgv~s~~~~VtsL~~~l~~~~~~~~v~~~l~~~f~~~~~~~ 224 (341)
T 1vqz_A 161 LLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYMKKEYPEM 224 (341)
T ss_dssp EESSCCTTHHHHHBCCCSSCCEECSCCCCCCCBCCGGGTCSSCCCHHHHHHHHHHHHHHHCTTC
T ss_pred EEecCCHHHHHHHhCCCccchhhcccccchhhheeHHHhcCCCCCHHHHHHHHHHHHHHhcCCC
Confidence 99999999876 56799998765 99999988889999999999999999999876
No 7
>3a7r_A Lipoate-protein ligase A; adenylate-forming enzyme, lipoic acid, ATP-binding, cytoplasm, nucleotide-binding, transferase, lipoyl; HET: LAQ; 2.05A {Escherichia coli} PDB: 1x2h_A* 3a7a_A* 1x2g_A*
Probab=100.00 E-value=3e-39 Score=291.15 Aligned_cols=205 Identities=14% Similarity=0.152 Sum_probs=173.1
Q ss_pred eeEEEEcCCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccCCccccchhhHhhhhhCCCcEEEeccC
Q psy3135 4 QVQLVRLGLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRG 83 (229)
Q Consensus 4 ~~~v~~~G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~~~~~~~~~~~~~l~~~gi~v~r~~rG 83 (229)
.+++++.+..+-...|++++.+++... ..+++|+||+|||+||+|++| +.+.+++.+++++.||+|+||.||
T Consensus 2 ~~r~i~~~~~d~~~nlA~ee~Ll~~~~-------~~~~~l~l~~~~p~v~iG~~q-~~~~e~~~~~~~~~gi~vvRR~sG 73 (337)
T 3a7r_A 2 TLRLLISDSYDPWFNLAVEECIFRQMP-------ATQRVLFLWRNADTVVIGRAQ-NPWKECNTRRMEEDNVRLARRSSG 73 (337)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHCC-------TTCEEEEEECCSSEEEECTTC-CHHHHSCHHHHHHTTCEEEECSSC
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHhcC-------CCCcEEEEEeCCCEEEECCCC-ChhHhhCHHHHHHcCCeEEEEcCC
Confidence 578888888898999999999998764 236899999999999999999 666678889999999999999999
Q ss_pred CceeEecCCCeEEEEeeecCCCCCCHHHHHHHHHhh-cccCceEEeeCCCceEEeC--CC-CceeeeceeeeCcEEEEee
Q psy3135 84 GLITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT-QEFSLNAGLIPKYTGVFLD--DE-YKVCAIGVHSSLYITHHGL 159 (229)
Q Consensus 84 Gg~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~le~~-~~~gi~a~~~~~~~gv~v~--~~-rKIasiG~~i~~~it~HG~ 159 (229)
||+|||||||| .|+++..+.. .+.+.+...+.++ +.|||+|++. +++||||+ ++ +||||+|+++++++++||+
T Consensus 74 GgaVyHd~G~l-~ys~i~~~~~-~~y~~l~~~ii~~L~~lGi~a~~~-g~~di~v~~~~g~rKIsG~Aqr~~~~~~lhhg 150 (337)
T 3a7r_A 74 GGAVFHDLGNT-CFTFMAGKPE-YDKTISTSIVLNALNALGVSAEAS-GRNDLVVKTVEGDRKVSGSAYRETKDRGFHHG 150 (337)
T ss_dssp SCCEEECTTEE-EEEEEEETTT-CCHHHHHHHHHHHHHHTTCCEEEE-TTTEEEECCTTSCEEEEEEEEEECSSEEEEEE
T ss_pred CccEEECCCcE-EEEEEECCcc-cCHHHHHHHHHHHHHHcCCeEEEC-CCCcEEEEeCCCceEEEEEEEEEECCEEEEEE
Confidence 99999999999 8998877653 4555555555555 8999999986 55999995 45 8999999999999999999
Q ss_pred eeecCCCccc---cccccCCCCCCCC-------eeeechhcCCCCCHHHHHHHHHHHHHHhhccccccccc
Q psy3135 160 AINCDTDLTW---FNHITPCGIKDKQ-------VTSLSKHLSKDITVDTVVPLFKKHFESVFECECSEVEL 220 (229)
Q Consensus 160 alNv~~dl~~---f~~I~pcGl~~~~-------vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~~~~~~~~~ 220 (229)
+||+++|++. |..+.|||+.++. ||||+++++ .+++++++++++++|++.|+.+.....+
T Consensus 151 tll~~~dl~~l~~~l~~~~~~~~~kgv~sv~~~vt~L~~~~~-~~~~~~v~~~l~~~f~~~~~~~~~~~~l 220 (337)
T 3a7r_A 151 TLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLP-GITHEQVCEAITEAFFAHYGERVEAEII 220 (337)
T ss_dssp EEESSCCHHHHHHHTSCCCCEEEECSCCCCCCCBCCGGGTCT-TCCHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred EEEecCCHHHHHHHhcCChhhhhhcCCCchhhheeEHHHhCC-CCCHHHHHHHHHHHHHHHcCCCCceecC
Confidence 9999999875 4577899997754 577777654 5999999999999999999976543333
No 8
>2e5a_A Lipoyltransferase 1; lipoyl-AMP, ligase; HET: LAQ; 2.10A {Bos taurus} PDB: 3a7u_A
Probab=100.00 E-value=2e-37 Score=280.28 Aligned_cols=201 Identities=13% Similarity=0.198 Sum_probs=168.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHHHHhhccCCCCCCCCeEEEEeeCCeEEeccCCccccchhhHhhhhhCCCcEEEeccCC
Q psy3135 5 VQLVRLGLVSYSNGIKIQEHYVNKLKTLISKPSNHSGTLLLLEHKPVYTIGIRSLKEYDENLELKLNKLGADFYKTNRGG 84 (229)
Q Consensus 5 ~~v~~~G~~~y~~~~~~q~~l~~~~~~~~~~~~~~~~~lll~eh~pv~T~Gr~~~~~~~~~~~~~l~~~gi~v~r~~rGG 84 (229)
..++..+..+-...|++++.+++.... ..+++|+||+|||+||+|++| +.+.+++.+++++.||+|+||.|||
T Consensus 5 ~~~i~~~~~d~~~nlAlee~Ll~~~~~------~~~~~l~l~~~~p~v~iG~~q-~~~~e~~~~~~~~~gi~vvRR~sGG 77 (347)
T 2e5a_A 5 GLILQSISNDVYHNLAVEDWIHDHMNL------EGKPVLFLWRNSPTVVIGRHQ-NPWQECNLNLMREEGVKLARRRSGG 77 (347)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHHHCCC------TTCCEEEEECCSSEEEECTTC-CHHHHSCHHHHHTTTCEEEECSSCS
T ss_pred CEEEECCCCCHHHHHHHHHHHHHhccc------CCCCEEEEEcCCCEEEECCCC-CchhhhCHHHHHHCCCeEEEECCCC
Confidence 456677778888899999999987642 357899999999999999999 6666788899999999999999999
Q ss_pred ceeEecCCCeEEEEeeecCCCCCCHHHHHHHHHhh-cccC--ceEEeeCCCceEEeCCCCceeeeceeeeCcEEEEeeee
Q psy3135 85 LITFHGPGQLVAYPIINLKHFTPSIKWFVQSIEQT-QEFS--LNAGLIPKYTGVFLDDEYKVCAIGVHSSLYITHHGLAI 161 (229)
Q Consensus 85 g~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~le~~-~~~g--i~a~~~~~~~gv~v~~~rKIasiG~~i~~~it~HG~al 161 (229)
++||||||| +.|+++..+.. .+...+.+.+.++ +.+| |+|+.. +++||||++++||||+|+++++++++||.+|
T Consensus 78 gaVyHd~G~-l~ys~i~~~~~-~~~~~~~~~ii~~L~~lG~~i~a~~~-g~~di~v~g~~KIsG~Aq~~~~~~~lhhgtl 154 (347)
T 2e5a_A 78 GTVYHDMGN-INLTFFTTKKK-YDRMENLKLVVRALKAVHPHLDVQAT-KRFDLLLDGQFKISGTASKIGRNAAYHHCTL 154 (347)
T ss_dssp CCEEECTTE-EEEEEEECGGG-CCHHHHHHHHHHHHHHHSTTCCEEEC-TTSCEEETTTEEEECEEEEECSSCEEEEEEE
T ss_pred CcEEECCCc-EEEEEEecccc-CCHHHHHHHHHHHHHHhCCceEEEEC-CCCcEEECCCcEEEEEeEEeeCCeEEEEEEE
Confidence 999999999 68888876543 4555555555555 8888 999885 5699999854899999999999999999899
Q ss_pred ecCCCcc---ccccccCCCCCCCCeeeech------hcCCCCCHHHHHHHHHHHHHHhhcccc
Q psy3135 162 NCDTDLT---WFNHITPCGIKDKQVTSLSK------HLSKDITVDTVVPLFKKHFESVFECEC 215 (229)
Q Consensus 162 Nv~~dl~---~f~~I~pcGl~~~~vtSl~~------~l~~~~~~~~v~~~l~~~f~~~f~~~~ 215 (229)
|+++|++ .+..+.|||+.++.++|+.+ +++.++++++++++++++|.+.|+.+.
T Consensus 155 l~~~d~~~l~~~l~~~~~~~~~kgv~Sv~~~v~~L~~~~~~~~~~~v~~~l~~~f~~~~~~~~ 217 (347)
T 2e5a_A 155 LCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDPTLTCEVVINAVATEYATSHQIDN 217 (347)
T ss_dssp ESSCCHHHHHHHTSCCCCSEEECSCCCCCCCBCCHHHHCTTCCHHHHHHHHHHHHHHHHTCCC
T ss_pred EEecCHHHHHHHHccCchhhhhhcccchHHhhccHHHhCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 9999975 45667899998877666653 234679999999999999999998653
No 9
>2dxu_A Biotin--[acetyl-COA-carboxylase] ligase; biotin biosynthesis, dimer, X-RAY diffraction, structural genomics, NPPSFA; HET: BT5; 1.28A {Pyrococcus horikoshii} PDB: 2dzc_A 2ejg_A* 2e3y_A* 2e41_A* 2e64_A 2ejf_A* 2zgw_A* 1wqw_A* 1wpy_A* 1wq7_A 1wnl_A* 1x01_A* 2dkg_A* 2dth_A* 2dti_A* 2dto_A* 2fyk_A* 2djz_A* 2hni_A 2e10_A ...
Probab=98.64 E-value=1.6e-07 Score=80.06 Aligned_cols=118 Identities=16% Similarity=0.189 Sum_probs=89.2
Q ss_pred ccCCceeEecCCCeEEEEeeecCCCCCC--HHHHHHH--HHhh-cccCceEEeeCCCceEEeCCCCceeeeceeeeCcEE
Q psy3135 81 NRGGLITFHGPGQLVAYPIINLKHFTPS--IKWFVQS--IEQT-QEFSLNAGLIPKYTGVFLDDEYKVCAIGVHSSLYIT 155 (229)
Q Consensus 81 ~rGGg~tyHgpGQLv~Y~il~l~~~~~~--~~~~v~~--le~~-~~~gi~a~~~~~~~gv~v~~~rKIasiG~~i~~~it 155 (229)
-|.|..++--||+|.+..++........ .-.++-. +.++ +.+|+++..+-+ |||++++ +|||+|=+.......
T Consensus 47 GR~Gr~W~Sp~G~l~~S~~l~p~~~~~~~~~l~l~~alAv~~al~~~~~~~~iKWP-NDi~~~g-kKl~GIL~E~~~~~v 124 (235)
T 2dxu_A 47 GALNRKWESPEGGLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSIDGRIKWP-NDVLVNY-KKIAGVLVEGKGDKI 124 (235)
T ss_dssp CGGGCBCCCCTTSEEEEEEECCCSCGGGGGGHHHHHHHHHHHHHHHTTCCCEEETT-TEEEETT-EEEEEEEEEECSSCE
T ss_pred CCCcCcccCCCCCeEEEEEeecCCCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeCC-CEEEECC-EEEEEEEEeecCCEE
Confidence 4678888888899988888854322111 1122222 2233 666999999988 9999999 999999887765667
Q ss_pred EEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 156 HHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 156 ~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
.-|+.+|++.+ | |.. .|||..+.+.+++.+++...++++|.+.+.
T Consensus 125 ViGiGiNv~~~---~----p~~-----atsL~~~~~~~~~r~~ll~~ll~~l~~~~~ 169 (235)
T 2dxu_A 125 VLGIGLNVNNK---V----PNG-----ATSMKLELGSEVPLLSVFRSLITNLDRLYL 169 (235)
T ss_dssp EEEEEECSSSC---C----CTT-----BCCHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCC---C----CCc-----hhhHHHhhCCCCCHHHHHHHHHHHHHHHHH
Confidence 78999999986 2 321 899998888899999999999999988774
No 10
>2eay_A Biotin [acetyl-COA-carboxylase] ligase; biotin biosynthesis, dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.95A {Aquifex aeolicus} PDB: 3efs_A* 3fjp_A 3efr_A*
Probab=98.64 E-value=3e-07 Score=78.28 Aligned_cols=123 Identities=20% Similarity=0.154 Sum_probs=82.6
Q ss_pred eccCCceeEecCCCeEEEEeeecCCCCCC--HHHHHHHH--Hhh-ccc-CceEEeeCCCceEEeCCCCceeeeceeeeCc
Q psy3135 80 TNRGGLITFHGPGQLVAYPIINLKHFTPS--IKWFVQSI--EQT-QEF-SLNAGLIPKYTGVFLDDEYKVCAIGVHSSLY 153 (229)
Q Consensus 80 ~~rGGg~tyHgpGQLv~Y~il~l~~~~~~--~~~~v~~l--e~~-~~~-gi~a~~~~~~~gv~v~~~rKIasiG~~i~~~ 153 (229)
|-|.|..++--||+|.+..++... .... .-.++-.+ .++ +.+ |+++..+-+ ||||+++ +|||+|=+.....
T Consensus 38 RGR~Gr~W~Sp~G~l~~S~~l~p~-~~~~~~~lsl~~~lAv~~al~~~~~~~~~iKWP-NDI~~~g-kKl~GIL~E~~~~ 114 (233)
T 2eay_A 38 RGRLGRKWLSQEGGLYFSFLLNPK-EFENLLQLPLVLGLSVSEALEEITEIPFSLKWP-NDVYFQE-KKVSGVLCELSKD 114 (233)
T ss_dssp -----------CCEEEEEEEECTT-TCCCTTHHHHHHHHHHHHHHHHHHCCCCEEETT-TEEEETT-EEEEEEEEEEETT
T ss_pred CCCCCCeeeCCCCCcEEEEEEcCC-CHHHHHHHHHHHHHHHHHHHHHhcCCCccEeCc-ceEEECC-eEEEEEEEEeecC
Confidence 347788888889988888888654 2222 22233332 233 554 889999888 9999999 9999998876554
Q ss_pred EEEEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 154 ITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 154 it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
...-|+-||++. +. .|..+. ..+|||..+.+.+++.+++...++++|.+.+.
T Consensus 115 ~~ViGIGiNv~~--~~----~p~~~~-~~atsL~~~~~~~~~r~~ll~~ll~~l~~~~~ 166 (233)
T 2eay_A 115 KLIVGIGINVNQ--RE----IPEEIK-DRATTLYEITGKDWDRKEVLLKVLKRISENLK 166 (233)
T ss_dssp EEEEEEEEECSC--CC----CCTTTT-TTBCCHHHHHSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEccc--cc----Ccchhh-hhhhhhHHhHCCCCCHHHHHHHHHHHHHHHHH
Confidence 448899999997 22 244443 36999998888899999999999999988875
No 11
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3 domains, enzyme DNA binding, biotin coupling domains; 2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A 3rky_A* 3v7c_A* 3v7s_A* 3v8j_A 3v7r_A 3v8k_A* 3v8l_A* 4dq2_A*
Probab=98.59 E-value=6e-07 Score=79.95 Aligned_cols=125 Identities=16% Similarity=0.140 Sum_probs=84.0
Q ss_pred ccCCceeEecCC-CeEEEEeeecCCCCCC--HHHHHHH--HHhh-ccc-CceEEeeCCCceEEeCCCCceeeeceeeeC-
Q psy3135 81 NRGGLITFHGPG-QLVAYPIINLKHFTPS--IKWFVQS--IEQT-QEF-SLNAGLIPKYTGVFLDDEYKVCAIGVHSSL- 152 (229)
Q Consensus 81 ~rGGg~tyHgpG-QLv~Y~il~l~~~~~~--~~~~v~~--le~~-~~~-gi~a~~~~~~~gv~v~~~rKIasiG~~i~~- 152 (229)
-|.|..++--|| +|.+..++........ .-.++-. +.++ +.+ |+++..+-+ ||||+++ +|||+|=+....
T Consensus 121 GR~GR~W~Sp~G~~L~~S~~l~p~~~~~~~~~lsl~~avAv~~al~~~~~~~~~iKWP-NDI~~~g-kKl~GIL~E~~~~ 198 (323)
T 3rkx_A 121 GRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWP-NDIYIDN-GKVCGFLTEMVAN 198 (323)
T ss_dssp ---------CTTCEEEEEEEECCCCCTTSGGGHHHHHHHHHHHHHHTTCSSCEEEETT-TEEEETT-EEEEEEEEEEEEC
T ss_pred CCCCCeeeCCCCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHHHhcCCceEEeCC-CeEEECC-EEEEEEEeEeeeC
Confidence 378889999999 8888888865432111 1123322 2333 555 899999988 9999999 999999876432
Q ss_pred --c--EEEEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 153 --Y--ITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 153 --~--it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
. ...-|+.+||+.+...| |..++. .+|||..+.+.+++..++...++++|.+.+.
T Consensus 199 ~~~~~~vViGIGiNv~~~~~~~----p~~l~~-~atsL~~~~g~~~~r~~ll~~ll~~l~~~~~ 257 (323)
T 3rkx_A 199 NDGIEAIICGIGINLTQQLENF----DESIRH-RATSIQLHDKNKLDRYQFLERLLQEIEKRYN 257 (323)
T ss_dssp SSSEEEEEEEEEEECSCCGGGS----CTTTGG-GBCCSGGGCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEEEecCCcccC----CcccCc-ceeeHhhhhCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 34579999999864333 555543 6999998889999999999999999988774
No 12
>3rux_A BIRA bifunctional protein; biotin-protein ligase, ligase-ligase inhibitor complex; HET: BS5; 1.70A {Mycobacterium tuberculosis} PDB: 3l1a_A 3l2z_A 2cgh_A
Probab=98.54 E-value=4.8e-07 Score=78.70 Aligned_cols=121 Identities=10% Similarity=0.046 Sum_probs=88.4
Q ss_pred ccCCceeEecCC-CeEEEEeeecCCCCCC-H--HHHHHH--HHhh-c---cc-CceEEeeCCCceEEeCCCCceeeecee
Q psy3135 81 NRGGLITFHGPG-QLVAYPIINLKHFTPS-I--KWFVQS--IEQT-Q---EF-SLNAGLIPKYTGVFLDDEYKVCAIGVH 149 (229)
Q Consensus 81 ~rGGg~tyHgpG-QLv~Y~il~l~~~~~~-~--~~~v~~--le~~-~---~~-gi~a~~~~~~~gv~v~~~rKIasiG~~ 149 (229)
-|.|..++--|| +|.+..++.....+.. . -.++-. +.++ + .+ |++...+-+ ||||+++ +|||+|=+.
T Consensus 72 GR~GR~W~Sp~G~~L~~S~~l~~~~~~~~~~~~lsl~~~lAv~~aL~~~~~~~~~~~~iKWP-NDI~~~g-kKl~GIL~E 149 (270)
T 3rux_A 72 GRHGRGWAATARAQIILSVGVRVVDVPVQAWGWLSLAAGLAVLDSVAPLIAVPPAETGLKWP-NDVLARG-GKLAGILAE 149 (270)
T ss_dssp CGGGCEECCCTTSEEEEEEEEECTTSCGGGTHHHHHHHHHHHHHHHGGGSSSCCSSCEEETT-TEEEETT-EEEEEEEEE
T ss_pred CCCCCeeeCCCCCCeEEEEEEccCCCChHHHHHHHHHHHHHHHHHHHHhcccCCCceEEECC-CeEEECC-EEEEEEEEE
Confidence 477888888899 8988888876532211 1 122222 2233 5 54 888999888 9999999 999999887
Q ss_pred eeCcEEEEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 150 SSLYITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 150 i~~~it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
.......-|+.+||+..-..| +...+|||..+.+.. +.+++...++++|.+.+.
T Consensus 150 ~~~~~vViGIGiNv~~~~~~~--------~~~~atSL~~~~~~~-~r~~ll~~ll~~l~~~~~ 203 (270)
T 3rux_A 150 VAQPFVVLGVGLNVTQAPEEV--------DPDATSLLDLGVAAP-DRNRIASRLLRELEARII 203 (270)
T ss_dssp EETTEEEEEEEEESSCCHHHH--------CTTBCCTGGGTCSSC-CHHHHHHHHHHHHHHHHH
T ss_pred eeCCeEEEEEEEeccCCcccc--------CchhhccHHHhcCCC-CHHHHHHHHHHHHHHHHH
Confidence 665667789999999863222 124689998865554 999999999999988774
No 13
>2ej9_A Putative biotin ligase; biotin biosynthesis, monomer, X-RAY diffraction, structural genomics, NPPSFA; HET: BTN; 2.00A {Methanocaldococcus jannaschii}
Probab=98.50 E-value=9.4e-07 Score=75.34 Aligned_cols=124 Identities=19% Similarity=0.263 Sum_probs=92.1
Q ss_pred eccCCceeEecCCCeEEEEeeecCCCCCCHHHHHHHH--Hhh-ccc-CceEEeeCCCceEEeCCC---CceeeeceeeeC
Q psy3135 80 TNRGGLITFHGPGQLVAYPIINLKHFTPSIKWFVQSI--EQT-QEF-SLNAGLIPKYTGVFLDDE---YKVCAIGVHSSL 152 (229)
Q Consensus 80 ~~rGGg~tyHgpGQLv~Y~il~l~~~~~~~~~~v~~l--e~~-~~~-gi~a~~~~~~~gv~v~~~---rKIasiG~~i~~ 152 (229)
|-|.|..++--||+|.+..+++....+...-.++-.+ .++ +.+ |++...+-+ ||||++++ +|||+|=+....
T Consensus 38 RGR~Gr~W~Sp~G~l~~S~~l~p~~~~~~~l~l~~~lAv~~al~~~~~~~~~iKWP-NDi~~~g~~~~kKl~GIL~E~~~ 116 (237)
T 2ej9_A 38 KGRWGRVWYSDEGGLYFSMVLDSKLYNPKVINLLVPICIIEVLKNYVDKELGLKFP-NDIMVKVNDNYKKLGGILTELTD 116 (237)
T ss_dssp BCGGGCBCCCCTTSEEEEEEEETTSSCHHHHHHHHHHHHHHHHTTTCCSCEEEETT-TEEEEEETTEEEEEEEEEEEECS
T ss_pred CCCCCCeeeCCCCCeEEEeEEccccCCHHHHHHHHHHHHHHHHHHhhCCCcceeCC-CEEEECCCcCccEeeEEEEecCC
Confidence 3467888888899999999987522222111122222 222 565 889999988 99999764 899999887766
Q ss_pred cEEEEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 153 YITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 153 ~it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
....-|+.+|++.+ .|..+. ..+|||..+.+.+++.+++...++++|.+.+.
T Consensus 117 ~~vViGiGiNv~~~-------~p~~l~-~~atsL~~~~~~~~~r~~ll~~ll~~l~~~~~ 168 (237)
T 2ej9_A 117 DYMIIGIGINVNNQ-------IRNEIR-EIAISLKEITGKELDKVEILSNFLKTFESYLE 168 (237)
T ss_dssp SEEEEEEEECSSSC-------CCGGGG-GTBCCHHHHHSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEecCCC-------Ccchhh-hhhccHhHhHCCCCCHHHHHHHHHHHHHHHHH
Confidence 67789999999986 243443 36999998888899999999999999998875
No 14
>3bfm_A Biotin protein ligase-like protein of unknown FUN; structural genomics, joint center for structural genomics, J protein structure initiative; HET: 2PE; 1.70A {Silicibacter SP}
Probab=98.30 E-value=1.3e-05 Score=68.01 Aligned_cols=144 Identities=13% Similarity=0.109 Sum_probs=93.6
Q ss_pred eCCeEEeccCCccccchhhHh--hhhhCCCcEEEeccCCceeEecCC-CeEEEEeeecCCCCCCHHH-----HHHH--HH
Q psy3135 48 HKPVYTIGIRSLKEYDENLEL--KLNKLGADFYKTNRGGLITFHGPG-QLVAYPIINLKHFTPSIKW-----FVQS--IE 117 (229)
Q Consensus 48 h~pv~T~Gr~~~~~~~~~~~~--~l~~~gi~v~r~~rGGg~tyHgpG-QLv~Y~il~l~~~~~~~~~-----~v~~--le 117 (229)
.||.+|+=.-..-.. .+.. .+...|. ..|-+++-.|| +|.+..++.... .... ++-. +.
T Consensus 8 ~pp~~~~~~l~~~~S--TN~~a~~~a~~g~------~~g~vv~A~~g~~L~~S~~l~~~~---~~~~~~~lsl~~alAv~ 76 (235)
T 3bfm_A 8 FPPLMTGEAAGPGQD--PFDLACQKAELGV------DAGLVVYELGTDVLRAALVLAPEV---PLAKAMAMLPVCGVGFQ 76 (235)
T ss_dssp CCTTCEEEECCTTCC--HHHHHHHHHHTTC------CTTEEEEEECSSEEEEEEEECCSS---CHHHHTTHHHHHHHHHH
T ss_pred CCCCcceeecCCCCC--HHHHHHHHHhcCC------CCCEEEEEcCCCCEEEEEEecCCC---CHHHHHHHHHHHHHHHH
Confidence 488888766552111 1221 1222332 24556666688 688888876532 2221 2222 22
Q ss_pred hh-cccC-ce--EEeeCCCceEEeCCCCceeeeceeeeC-------cEEEEeeeeecCCCccccccccCCCCCCCCeeee
Q psy3135 118 QT-QEFS-LN--AGLIPKYTGVFLDDEYKVCAIGVHSSL-------YITHHGLAINCDTDLTWFNHITPCGIKDKQVTSL 186 (229)
Q Consensus 118 ~~-~~~g-i~--a~~~~~~~gv~v~~~rKIasiG~~i~~-------~it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl 186 (229)
++ +.++ .+ ...+-+ ||||+++ +|||+|=+.... ....-|+.+|++... |.++. ...|||
T Consensus 77 ~aL~~~~~~~~~~~iKWP-NDI~~~g-kKl~GIL~E~~~~~~~~~~~~vViGIGiNv~~~~-------~~~~~-~~atsL 146 (235)
T 3bfm_A 77 NALGALAPPEVAVHLDWN-GALRING-ARCGRLRIAASTDDPDTQPDWLVVGLDLPLWPEG-------DGGET-PDETAL 146 (235)
T ss_dssp HHHHHHSCTTCCEEECTT-SEEEETT-EEEEEEEEEESCCCTTSCCSCEEEEEEEESSCCC-------SSCCC-CCSCCG
T ss_pred HHHHHhcCCCcceEecCC-CeEEECC-eEEEEEEEEeeccCCCCCccEEEEEEEEEcCCCC-------ccccc-ccccch
Confidence 33 4554 34 788888 9999999 999999876543 256789999999762 12332 358999
Q ss_pred chhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 187 SKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 187 ~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
..+.+..++.+++...++++|.+.+.
T Consensus 147 ~~~~~~~~~r~~ll~~ll~~l~~~~~ 172 (235)
T 3bfm_A 147 YAEGCADVAAPRLLESWARHCLHWIN 172 (235)
T ss_dssp GGTTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHhhCCCCCHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999988775
No 15
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=98.26 E-value=7.9e-06 Score=72.42 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=77.5
Q ss_pred cCCceeEecCC-CeEEEEeeecCCCCCCHH--HHHHH--HHhh-cccCc-eEEeeCCCceEEeCCCCceeeeceeeeC--
Q psy3135 82 RGGLITFHGPG-QLVAYPIINLKHFTPSIK--WFVQS--IEQT-QEFSL-NAGLIPKYTGVFLDDEYKVCAIGVHSSL-- 152 (229)
Q Consensus 82 rGGg~tyHgpG-QLv~Y~il~l~~~~~~~~--~~v~~--le~~-~~~gi-~a~~~~~~~gv~v~~~rKIasiG~~i~~-- 152 (229)
|.|..++--|| +|.+..++.......... .++-. +.++ +.+|+ ++..+-+ ||||+++ +|||+|=+....
T Consensus 118 R~gr~W~Sp~g~~l~~S~~l~~~~~~~~~~~l~l~~~~av~~al~~~~~~~~~iKWP-NDi~~~g-~Kl~GIL~E~~~~~ 195 (321)
T 1bia_A 118 RRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWP-NDLYLQD-RKLAGILVELTGKT 195 (321)
T ss_dssp -------CCTTSEEEEEEEEEECC-CCCTHHHHHHHHHHHHHHHHHTTCTTCEEETT-TEEEETT-EEEEEEEEEEEC--
T ss_pred CCCCcccCCCCCCEEEEEEEccCCChHHHhhHHHHHHHHHHHHHHHhCCCCccEeCc-ceeeECC-eeEEEEEEEeeecC
Confidence 77778888889 788888886643222221 12222 2233 77887 5888888 9999999 999999776532
Q ss_pred ---cEEEEeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHHHHhhc
Q psy3135 153 ---YITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 153 ---~it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
....-|+.+||+.+. .| |..+. ..+|||.. .+.+++.+++...++++|.+.+.
T Consensus 196 ~~~~~~viGiGiNv~~~~-~~----~~~~~-~~atsL~~-~~~~~~r~~ll~~ll~~l~~~~~ 251 (321)
T 1bia_A 196 GDAAQIVIGAGINMAMRR-VE----ESVVN-QGWITLQE-AGINLDRNTLAAMLIRELRAALE 251 (321)
T ss_dssp --CEEEEEEEEEECCC-----------------CCCTTT-TTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEEecCCCc-cc----cchhc-cccccHHh-cCCCCCHHHHHHHHHHHHHHHHH
Confidence 245689999999863 22 22232 35899987 68889999999999999988775
No 16
>2ddz_A 190AA long hypothetical protein; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; 2.24A {Pyrococcus horikoshii} SCOP: d.104.1.4
Probab=95.76 E-value=0.082 Score=43.06 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=57.2
Q ss_pred HHHHHhh-cccCceEEeeCCCceEEeCCCCceee-eceeeeCcEEEEeeeeecCCCccccccccCCCCCCCCeeeechhc
Q psy3135 113 VQSIEQT-QEFSLNAGLIPKYTGVFLDDEYKVCA-IGVHSSLYITHHGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHL 190 (229)
Q Consensus 113 v~~le~~-~~~gi~a~~~~~~~gv~v~~~rKIas-iG~~i~~~it~HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l 190 (229)
+..+.+. ..+|++..+. + .|+|+++ ||++- |+.. +---+.-.+.+||+.+=. |. +....+|.+ +
T Consensus 92 v~i~kE~L~~~g~~~~R~-G-DDLy~~~-~KLSVSIAt~-s~vS~kIH~GiNV~s~g~------P~---~V~aigL~d-l 157 (190)
T 2ddz_A 92 IARLVELLWNYGIEASRR-G-DDIYVNG-RKLSISIATV-SPVSIKIHIGLNVKTVGV------PP---GVDAIGLEE-L 157 (190)
T ss_dssp HHHHHHHHHTTTCCEEEE-T-TEEEETT-EECEEEEEEE-CSSCEEEEEEEESCCSSC------CS---SSCBCCHHH-H
T ss_pred HHHHHHHHHHcCCeeeec-c-CeeeECC-CEEEEEEEec-CcchheEEEEEeecccCC------CC---CccccCHHH-c
Confidence 3334455 7889999986 4 5999999 99864 4332 333333557899998622 22 245677776 6
Q ss_pred CCCCCHHHHHHHHHHHHHHhhc
Q psy3135 191 SKDITVDTVVPLFKKHFESVFE 212 (229)
Q Consensus 191 ~~~~~~~~v~~~l~~~f~~~f~ 212 (229)
|. ++.++++.+...+++.+.
T Consensus 158 Gi--~i~~~~~~i~~~y~~E~~ 177 (190)
T 2ddz_A 158 GI--DPTEFMERSAKALVEEIE 177 (190)
T ss_dssp TC--CHHHHHHHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHHHHHH
Confidence 75 888888888888887764
No 17
>2bps_A YUKD protein; ubiquitin-like protein, ubiquitin; 2.7A {Bacillus subtilis}
Probab=24.74 E-value=28 Score=24.20 Aligned_cols=40 Identities=30% Similarity=0.353 Sum_probs=27.0
Q ss_pred EeeeeecCCCccccccccCCCCCCCCeeeechhcCCCCCHHHHHHHHHHHH
Q psy3135 157 HGLAINCDTDLTWFNHITPCGIKDKQVTSLSKHLSKDITVDTVVPLFKKHF 207 (229)
Q Consensus 157 HG~alNv~~dl~~f~~I~pcGl~~~~vtSl~~~l~~~~~~~~v~~~l~~~f 207 (229)
||.-+||+.|++.|. + +.-.|+ +...+++.++.+.+.++|
T Consensus 1 ~~~yI~ITidl~~y~--------~-~~~DLR--IP~~~tvK~Li~~l~ea~ 40 (81)
T 2bps_A 1 HGSYIDITIDLKHYN--------G-SVFDLR--LSDYHPVKKVIDIAWQAQ 40 (81)
T ss_dssp CCCEEEEEEECTTTT--------C-CEEEEE--EETTSBTTHHHHHHHHHS
T ss_pred CCcEEEEEEEeeccC--------C-ceEEEE--CCCchhHHHHHHHHHHHh
Confidence 788899999987763 2 344443 455678887777665554
Done!