Query psy3139
Match_columns 708
No_of_seqs 376 out of 2491
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 17:26:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3139.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3139hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2413|consensus 100.0 7E-144 1E-148 1185.7 42.0 574 42-707 10-606 (606)
2 COG0006 PepP Xaa-Pro aminopept 100.0 1.8E-58 3.9E-63 506.2 35.7 352 256-659 3-382 (384)
3 PRK09795 aminopeptidase; Provi 100.0 1.7E-53 3.6E-58 463.5 35.1 331 265-657 2-355 (361)
4 TIGR02993 ectoine_eutD ectoine 100.0 2.5E-53 5.4E-58 467.1 35.5 351 256-660 4-390 (391)
5 PRK14575 putative peptidase; P 100.0 8E-50 1.7E-54 441.3 35.1 343 266-658 12-403 (406)
6 PRK14576 putative endopeptidas 100.0 1.5E-48 3.3E-53 431.0 34.7 342 267-658 13-402 (405)
7 PRK10879 proline aminopeptidas 100.0 5.2E-45 1.1E-49 406.5 33.6 346 260-660 3-428 (438)
8 PRK15173 peptidase; Provisiona 100.0 2.6E-44 5.6E-49 386.5 29.2 268 342-658 36-320 (323)
9 cd01085 APP X-Prolyl Aminopept 100.0 3.3E-42 7.1E-47 352.5 22.9 205 435-639 1-217 (224)
10 PRK13607 proline dipeptidase; 100.0 2E-40 4.4E-45 369.7 29.4 216 417-652 151-438 (443)
11 PRK12897 methionine aminopepti 100.0 1.3E-39 2.9E-44 337.3 22.5 209 426-652 3-247 (248)
12 PRK07281 methionine aminopepti 100.0 2.6E-39 5.6E-44 342.1 23.7 215 425-657 2-284 (286)
13 PRK12318 methionine aminopepti 100.0 2.6E-38 5.5E-43 335.5 23.1 219 419-655 34-291 (291)
14 TIGR00500 met_pdase_I methioni 100.0 3.1E-38 6.6E-43 326.0 22.9 209 426-652 2-246 (247)
15 PRK05716 methionine aminopepti 100.0 4.1E-37 8.8E-42 318.1 23.2 215 424-656 2-252 (252)
16 cd01087 Prolidase Prolidase. E 100.0 1.2E-36 2.5E-41 313.6 21.3 199 433-651 1-242 (243)
17 KOG2737|consensus 100.0 2.4E-36 5.1E-41 317.6 23.7 229 419-662 177-476 (492)
18 PRK12896 methionine aminopepti 100.0 2.3E-36 4.9E-41 313.0 22.0 211 424-652 7-254 (255)
19 KOG2414|consensus 100.0 9.4E-36 2E-40 316.1 26.0 369 242-661 42-481 (488)
20 cd01090 Creatinase Creatine am 100.0 3.6E-36 7.7E-41 308.5 21.7 201 433-651 1-227 (228)
21 PLN03158 methionine aminopepti 100.0 1.6E-35 3.4E-40 325.0 24.0 224 419-660 129-389 (396)
22 cd01091 CDC68-like Related to 100.0 2.1E-34 4.5E-39 298.4 21.1 206 433-651 1-242 (243)
23 cd01092 APP-like Similar to Pr 100.0 1.3E-33 2.8E-38 282.2 22.4 194 433-639 1-206 (208)
24 cd01086 MetAP1 Methionine Amin 100.0 1.8E-33 3.9E-38 288.5 22.0 202 433-652 1-238 (238)
25 cd01066 APP_MetAP A family inc 100.0 4.4E-31 9.5E-36 260.5 21.9 193 433-639 1-205 (207)
26 PF00557 Peptidase_M24: Metall 100.0 2.1E-31 4.6E-36 266.9 18.5 191 434-638 1-207 (207)
27 cd01089 PA2G4-like Related to 100.0 7.8E-31 1.7E-35 268.7 20.2 200 433-651 1-227 (228)
28 PTZ00053 methionine aminopepti 99.9 4E-25 8.6E-30 245.8 20.7 188 424-624 149-360 (470)
29 PRK08671 methionine aminopepti 99.9 5.1E-25 1.1E-29 234.0 20.4 178 432-624 1-189 (291)
30 TIGR00501 met_pdase_II methion 99.9 2.3E-24 5E-29 229.4 20.2 179 431-624 3-192 (295)
31 COG0024 Map Methionine aminope 99.9 3.1E-23 6.8E-28 214.7 22.7 209 427-654 5-253 (255)
32 cd01088 MetAP2 Methionine Amin 99.9 1.1E-23 2.5E-28 223.7 19.6 183 433-630 1-196 (291)
33 TIGR00495 crvDNA_42K 42K curve 99.9 4E-23 8.7E-28 227.3 21.5 197 425-632 11-242 (389)
34 KOG2738|consensus 99.8 2E-19 4.3E-24 185.7 19.6 210 426-653 115-360 (369)
35 KOG1189|consensus 99.6 2.1E-13 4.5E-18 154.6 24.3 237 412-663 122-388 (960)
36 PRK09795 aminopeptidase; Provi 99.5 2.7E-14 5.9E-19 156.1 11.4 109 42-221 2-112 (361)
37 PF01321 Creatinase_N: Creatin 99.4 6.2E-13 1.4E-17 122.9 9.7 125 43-240 1-130 (132)
38 PF01321 Creatinase_N: Creatin 99.3 3.4E-11 7.4E-16 111.3 10.5 126 266-427 1-132 (132)
39 COG5406 Nucleosome binding fac 98.8 6.5E-08 1.4E-12 108.7 14.2 206 412-624 155-386 (1001)
40 TIGR02993 ectoine_eutD ectoine 98.3 4.6E-06 9.9E-11 92.8 11.0 140 35-240 6-156 (391)
41 KOG2775|consensus 98.0 6E-05 1.3E-09 79.5 13.4 174 432-621 84-284 (397)
42 PRK14575 putative peptidase; P 97.7 0.00036 7.8E-09 78.2 12.3 147 40-241 9-177 (406)
43 COG0006 PepP Xaa-Pro aminopept 97.6 0.00046 1E-08 76.5 12.7 132 39-240 9-152 (384)
44 KOG2776|consensus 97.2 0.0049 1.1E-07 66.9 13.0 111 425-543 13-134 (398)
45 PRK14576 putative endopeptidas 96.5 0.018 3.9E-07 64.7 11.1 40 198-240 136-175 (405)
46 cd01086 MetAP1 Methionine Amin 94.3 0.23 5E-06 51.1 9.6 93 544-638 2-105 (238)
47 PLN03158 methionine aminopepti 94.2 0.2 4.4E-06 56.3 9.4 107 530-638 128-247 (396)
48 KOG2413|consensus 93.1 0.23 4.9E-06 57.6 7.5 101 266-375 11-129 (606)
49 PRK05716 methionine aminopepti 89.4 2 4.2E-05 44.7 9.4 90 546-636 14-113 (252)
50 PRK12896 methionine aminopepti 89.0 1.7 3.7E-05 45.2 8.6 89 534-624 5-104 (255)
51 PF05195 AMP_N: Aminopeptidase 88.4 2.5 5.4E-05 40.3 8.5 95 260-364 3-127 (134)
52 cd01088 MetAP2 Methionine Amin 81.6 8.5 0.00018 41.4 9.7 78 545-624 3-84 (291)
53 cd01087 Prolidase Prolidase. E 67.8 44 0.00094 34.5 10.4 78 545-624 3-83 (243)
54 TIGR03241 arg_catab_astB succi 67.7 8.3 0.00018 43.2 5.2 151 248-470 256-415 (443)
55 PRK07281 methionine aminopepti 65.6 41 0.00088 36.3 9.9 75 547-623 14-101 (286)
56 cd01092 APP-like Similar to Pr 61.2 62 0.0013 32.1 9.8 91 546-637 4-99 (208)
57 PRK12897 methionine aminopepti 58.0 64 0.0014 33.6 9.6 75 547-623 14-97 (248)
58 COG0024 Map Methionine aminope 56.5 49 0.0011 35.4 8.3 76 547-624 15-100 (255)
59 cd01066 APP_MetAP A family inc 53.8 1.1E+02 0.0023 29.8 10.0 78 546-624 4-83 (207)
60 TIGR00500 met_pdase_I methioni 51.3 84 0.0018 32.5 9.2 75 548-623 14-96 (247)
61 PF05195 AMP_N: Aminopeptidase 49.6 19 0.0004 34.4 3.6 69 39-121 5-76 (134)
62 PRK13281 succinylarginine dihy 49.4 21 0.00046 40.1 4.4 50 419-470 364-413 (442)
63 PRK12318 methionine aminopepti 48.0 1E+02 0.0022 33.2 9.4 76 547-624 53-139 (291)
64 TIGR00495 crvDNA_42K 42K curve 43.6 1.5E+02 0.0032 33.6 10.1 94 543-637 15-129 (389)
65 cd01090 Creatinase Creatine am 42.1 1.4E+02 0.0031 30.8 9.1 77 545-623 3-89 (228)
66 PRK10879 proline aminopeptidas 41.6 63 0.0014 36.9 6.9 70 39-122 5-79 (438)
67 PF02662 FlpD: Methyl-viologen 39.3 12 0.00027 35.3 0.6 47 5-57 43-92 (124)
68 KOG2738|consensus 38.8 92 0.002 34.1 7.0 95 542-638 117-226 (369)
69 cd00383 trans_reg_C Effector d 37.1 88 0.0019 26.9 5.7 57 209-279 24-80 (95)
70 PRK08671 methionine aminopepti 36.6 2.9E+02 0.0063 29.7 10.7 77 546-624 5-85 (291)
71 PF14826 FACT-Spt16_Nlob: FACT 36.3 66 0.0014 31.9 5.3 73 40-129 6-88 (163)
72 PRK05579 bifunctional phosphop 36.3 1.7E+02 0.0037 33.2 9.2 55 226-288 299-353 (399)
73 smart00862 Trans_reg_C Transcr 34.4 1.2E+02 0.0027 24.9 6.0 57 209-279 6-63 (78)
74 PRK11143 glpQ glycerophosphodi 33.4 65 0.0014 35.9 5.2 50 10-60 7-59 (355)
75 PF00486 Trans_reg_C: Transcri 31.9 80 0.0017 26.1 4.4 59 208-280 5-63 (77)
76 TIGR00501 met_pdase_II methion 31.0 3.5E+02 0.0076 29.2 10.2 84 549-636 11-102 (295)
77 COG2834 LolA Outer membrane li 29.7 1.6E+02 0.0034 30.2 6.9 45 2-60 4-48 (211)
78 PF00557 Peptidase_M24: Metall 29.3 3E+02 0.0065 27.3 8.8 77 545-622 2-82 (207)
79 PF04784 DUF547: Protein of un 28.7 53 0.0012 30.6 3.0 26 660-685 2-29 (117)
80 cd01089 PA2G4-like Related to 22.7 6E+02 0.013 26.0 9.8 92 545-637 3-111 (228)
81 PF14826 FACT-Spt16_Nlob: FACT 21.6 1.3E+02 0.0029 29.8 4.4 58 261-326 4-79 (163)
82 PF09413 DUF2007: Domain of un 21.4 1.4E+02 0.0031 24.4 4.0 20 42-61 10-29 (67)
No 1
>KOG2413|consensus
Probab=100.00 E-value=6.5e-144 Score=1185.66 Aligned_cols=574 Identities=35% Similarity=0.630 Sum_probs=547.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCccEEEecc
Q psy3139 42 QRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTTAVLWTEA 121 (708)
Q Consensus 42 ~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~a~l~td~ 121 (708)
.++.++|+.|++.+++|||||+.|+||| ||++ ++|+||+|||||+||+|++|||..+|+|||||
T Consensus 10 ~~~~~~~~~~~~~~i~aYi~Ps~DaH~s---------Ey~~-------~~D~R~~flsGFsGsag~Avit~~~a~lwtD~ 73 (606)
T KOG2413|consen 10 FELMRLRELMKSPPIDAYILPSTDAHQS---------EYIA-------DRDERRAFLSGFSGSAGTAVITEEEAALWTDG 73 (606)
T ss_pred HHHHHHHHHhcCCCceEEEccCCchhhh---------hhhc-------chhhhhhhhcccCCCcceEEEecCcceEEEcc
Confidence 3788999999999999999999999999 9999 99999999999999999999999999999999
Q ss_pred ccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhccCCCe
Q psy3139 122 KYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAKYTDK 201 (708)
Q Consensus 122 rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 201 (708)
||+.||++|++ ++|+|+++ |.+ +|++.+||.++++.+.+
T Consensus 74 RY~~QA~~qld-~~W~l~k~---------------------------------------~~~-~~~v~~wl~~~l~~~~~ 112 (606)
T KOG2413|consen 74 RYFQQAEQQLD-SNWTLMKM---------------------------------------GED-VPTVEEWLAKVLPEGSR 112 (606)
T ss_pred HHHHHHHhhhc-ccceeeec---------------------------------------cCC-CccHHHHHHHhCCCccc
Confidence 99999999999 69999998 554 68999999999999999
Q ss_pred EEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCCCE
Q psy3139 202 IASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSVDV 281 (708)
Q Consensus 202 ~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~Da 281 (708)
||+||.++++..|..+.+.|..++.+|++++.||||.+|.+||..|.+||..++.+|+|.++..|+..+|+.|++.++++
T Consensus 113 vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i~~nLVD~iW~~rP~~~~~~v~~l~~~~~G~~~~~Kv~~LR~~l~~~~~~a 192 (606)
T KOG2413|consen 113 VGIDPTLISFDAWKQLEKSLTSKGLELVPIPGNLVDEIWGDRPERPGNPVIVLDLEFAGLSVDDKVDNLRKKLKEKKCDA 192 (606)
T ss_pred cccCcceechhHHHhHHHHHhhCCCeEeeccccchhhhhccCCccCCCceEEeeccccCcchhHHHHHHHHHHhhcCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhcC--CcEEEeCccHhhhhhhhhhC--C
Q psy3139 282 MVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYLG--DIVIKPYDLVWTDLPEFVRT--G 357 (708)
Q Consensus 282 llIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l~--~v~v~~Y~~~~~~L~~l~~~--~ 357 (708)
+|+|++|+||||+||||+|+||||||++|++|+.+++.||+|..|++.+..+++. +|.++||++++..++.++.. .
T Consensus 193 ~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~~~~~~~v~i~pY~~i~~~i~~~~~~~~~ 272 (606)
T KOG2413|consen 193 FVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKKHLREDGVEIRPYDQIWSDIKNWASAFAD 272 (606)
T ss_pred EehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHHHHhhCceeeeeHHHHHHHHHHHhcccCc
Confidence 9999999999999999999999999999999999999999999999999888876 49999999999999988642 4
Q ss_pred CEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHH
Q psy3139 358 KCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMR 437 (708)
Q Consensus 358 ~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R 437 (708)
.+|++.+.+++.+... ++..+.+...+||..+||+||+.|+++||
T Consensus 273 ~~i~ia~~~~~~i~~~-----------------------------------i~~~~~~~~~Spi~~~kAiKN~~E~~gmr 317 (606)
T KOG2413|consen 273 KKIWISPETNYGIGEL-----------------------------------IGEDHSMIDPSPISRAKAIKNDDELKGMR 317 (606)
T ss_pred eeEeecccceeeeccc-----------------------------------ccccccccccCHHHHHHHhcChHHhhhhh
Confidence 5788877666555433 55566677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccc-cCCCCCcccCCCCCCCccccCC
Q psy3139 438 NSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAH-GTHATDAEYRPDAKTNVKIGDD 516 (708)
Q Consensus 438 ~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~-G~NaAi~Hy~p~~~t~~~l~~g 516 (708)
+||++|++|++++++|+++++..|..+||.++|.+|+++|+.+..|.|+||+||+++ |+|+|++||.|..++++++.+.
T Consensus 318 ~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G~NgAviHYsP~~e~n~~i~~~ 397 (606)
T KOG2413|consen 318 NSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVGPNGAVIHYSPPAETNRIVSPD 397 (606)
T ss_pred hcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccCCCCceeeecCCCccccceecCc
Confidence 999999999999999999999998779999999999999999999999999999966 9999999999999999999999
Q ss_pred -eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCCce
Q psy3139 517 -ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQRVH 595 (708)
Q Consensus 517 -llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGtGH 595 (708)
++|||||+||.+||||+|||+|||+||+++|+.||+||+||+++++++||+|+.|..+|.+||..||+.|+||.|||||
T Consensus 398 kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLDy~HgTGH 477 (606)
T KOG2413|consen 398 KIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLDYGHGTGH 477 (606)
T ss_pred eEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhccccCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCccccCC----------CccccCCcEEeeCCccc---ccCeEEeeEEEEeecc---c-ccccceeeccCCCcccc
Q psy3139 596 SIGEFLLVQEDF----------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAY---R-ERYMTMEVRSLFPFESR 658 (708)
Q Consensus 596 GVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~---~-~~~lgfE~LT~vP~~~~ 658 (708)
|||+||+|||+| +.+|++|||+|+||||| .|||||||+++|++.. + ..||+||+||++|++++
T Consensus 478 GVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~vvd~~~~~~~~~~L~fe~lT~vP~q~k 557 (606)
T KOG2413|consen 478 GVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVEVVDAGTKHNFRGFLTFEPLTLVPYQTK 557 (606)
T ss_pred ccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEEEEeccccccccceeeeccceecceecc
Confidence 999999999999 35799999999999999 8999999999998872 2 68999999999999999
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHcccccCCCcHHHHHHHHhcccCC
Q psy3139 659 LIDTSQLEPHEIRWINEFHATVRYVIGEQLVGRGLHAEYRTLIKKTDPL 707 (708)
Q Consensus 659 lId~~~Lt~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~wL~~~t~~~ 707 (708)
+||++|||++|++|||+||++|+++|+|+|+++++..+++||.++|+||
T Consensus 558 lid~~LLs~eE~~~LN~Yh~~v~~~i~~~L~~~~~~~~~~WL~~~t~Pi 606 (606)
T KOG2413|consen 558 LIDKSLLSEEEINWLNEYHAKVRSKIGPELQKEGRMEEYKWLINATQPI 606 (606)
T ss_pred cCChhhCCHHHHHHHHHHHHHHHHhccHHHhhccchhHHHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999997
No 2
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-58 Score=506.16 Aligned_cols=352 Identities=19% Similarity=0.277 Sum_probs=283.8
Q ss_pred cccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCCcHHHHhh
Q psy3139 256 LEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKITPVLRNY 334 (708)
Q Consensus 256 ~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl~~~v~~~ 334 (708)
..++.++...|+.+++..|.+.+.|++++++..|++||||++.. .+.. ...++++.+ +.+||++...........
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~~--~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 78 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDAF--GFER--LQALLVPAEGEPVLFVRGRDEEAAKETS 78 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCCC--cccc--eEEEEEcCCCceEEEEcchhHHHHHhhc
Confidence 45667788999999999999999999999999999999998751 1111 123344444 588999875533221111
Q ss_pred -c--CCcEEEeC--------ccHhhhhhhhhhCCCEEEecCC---chHHHHHHHhhhhhcCccCCCCccccccccccccc
Q psy3139 335 -L--GDIVIKPY--------DLVWTDLPEFVRTGKCLYLPDE---ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTA 400 (708)
Q Consensus 335 -l--~~v~v~~Y--------~~~~~~L~~l~~~~~~I~id~~---~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a 400 (708)
. .++..... +.+...+........+++++.. .+...+..+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~------------------------ 134 (384)
T COG0006 79 WIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQA------------------------ 134 (384)
T ss_pred ccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHh------------------------
Confidence 1 12211111 1122333333222356777765 34454555442
Q ss_pred cccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhc
Q psy3139 401 VDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEH 480 (708)
Q Consensus 401 ~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~ 480 (708)
.++..++++..+++..+|++||+.||+.||+|+.++++|+.++++|++ +| +||.+++++++..+.+.
T Consensus 135 -------~~~~~~~~~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~----~g--~tE~ev~a~l~~~~~~~ 201 (384)
T COG0006 135 -------ALPRAELVDASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIR----PG--MTEAEIAAELEYALRKG 201 (384)
T ss_pred -------hCCCCEEeccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcc----CC--CcHHHHHHHHHHHHHHc
Confidence 244458899999999999999999999999999999999999998776 57 89999999999876655
Q ss_pred CCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHH
Q psy3139 481 WSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIA 559 (708)
Q Consensus 481 ~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ia 559 (708)
+ ..++||++|+++|+|+++|||.|+ ++++++| +|++|+|++|.+|+||+||||++|+|+++||++|+.|++||.+
T Consensus 202 G-~~~~sf~~iv~~G~n~a~pH~~~~---~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~a 277 (384)
T COG0006 202 G-AEGPSFDTIVASGENAALPHYTPS---DRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEA 277 (384)
T ss_pred C-CCccCcCcEEeccccccCcCCCCC---cccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHH
Confidence 4 456799999999999999999986 6888999 9999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCchHHHHHHHHHHHHHcC--CCCCCCCceecCCCCccccCC-------CccccCCcEEeeCCccc---ccC
Q psy3139 560 LVTTQFLPGSSLHRLEYLLEQPLLALA--LDYRPQRVHSIGEFLLVQEDF-------NSTLNINFFGVVEPEYL---DCG 627 (708)
Q Consensus 560 l~~a~fp~G~~g~~lD~~AR~~L~~~G--~~y~HGtGHGVG~~L~VHEgP-------~~~Le~GMV~SiEPGiY---~~G 627 (708)
++.+++| |+++.++|.+||+++|+.| .+|.||||||||++|+|||.| ..+|+||||||+|||+| .+|
T Consensus 278 a~~~~rp-G~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GMv~t~Epg~y~~g~~G 356 (384)
T COG0006 278 AIAAIRP-GVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGMVFSIEPGIYIPGGGG 356 (384)
T ss_pred HHHHhCC-CCcHHHHHHHHHHHHHhcCCcccccCCccccCCCCcccCcCccccCCCCCccccCCcEEEeccccccCCCce
Confidence 9999887 8899999999999999955 479999999999999999999 25899999999999999 899
Q ss_pred eEEeeEEEEeecccccccceeeccCCCccccc
Q psy3139 628 IKIGQVIQVVPAYRERYMTMEVRSLFPFESRL 659 (708)
Q Consensus 628 IRIEn~VlVte~~~~~~lgfE~LT~vP~~~~l 659 (708)
|||||+|+||++ |||+||.+|.+...
T Consensus 357 irIEd~vlVte~------G~e~LT~~~~~~~~ 382 (384)
T COG0006 357 VRIEDTVLVTED------GFEVLTRVPKELLV 382 (384)
T ss_pred EEEEEEEEEcCC------CceecccCCcceee
Confidence 999999999999 99999977766544
No 3
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=1.7e-53 Score=463.50 Aligned_cols=331 Identities=15% Similarity=0.199 Sum_probs=270.2
Q ss_pred hHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhcCC--cEEEe
Q psy3139 265 NKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYLGD--IVIKP 342 (708)
Q Consensus 265 ~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l~~--v~v~~ 342 (708)
+|++++|+.|+++++|+++|+.++|+.||||+.|+. ++++|+.++..||+|.+... +++....+ +.+.+
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td~ry~~-qa~~~~~~~~v~~~~ 72 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVDSRYYA-DVEARAQGYQLHLLD 72 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcCcchHH-HHHhhCCCceEEEec
Confidence 589999999999999999999999999999999753 46788888888888875433 34344443 22322
Q ss_pred Cc-cHhhhhhhhhh--CCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCC
Q psy3139 343 YD-LVWTDLPEFVR--TGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGP 418 (708)
Q Consensus 343 Y~-~~~~~L~~l~~--~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~ 418 (708)
+. .+.+.|..+.. ..++|++|.. .++..++.+.+ .+ ..++++.
T Consensus 73 ~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~-------------------------------~l-~~~~~~~- 119 (361)
T PRK09795 73 ATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQS-------------------------------EL-NAKLVSA- 119 (361)
T ss_pred CCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHH-------------------------------hc-Ccccccc-
Confidence 22 23445555432 1358999987 67777777642 02 1233333
Q ss_pred chhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCC
Q psy3139 419 SPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHA 498 (708)
Q Consensus 419 ~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~Na 498 (708)
.+..+|+||||+||+.||+|+.+...++..++ +.+++| +||.|+++.++....+. +....+|++|+++|+|+
T Consensus 120 -~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~----~~i~~G--~tE~e~~~~~~~~~~~~-G~~~~~f~~iv~sG~~~ 191 (361)
T PRK09795 120 -TPDVLRQIKTPEEVEKIRLACGIADRGAEHIR----RFIQAG--MSEREIAAELEWFMRQQ-GAEKASFDTIVASGWRG 191 (361)
T ss_pred -cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH----HhccCC--CcHHHHHHHHHHHHHHC-CCCcCCCCeEEEEeccc
Confidence 38999999999999999999987777765544 456778 89999999998765544 34568999999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCC--CCHH---HHHHHHHHHHHHHHHHHhcCCCCCchH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGI--PTPL---QRSVYTAILKGLIALVTTQFLPGSSLH 572 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~--pt~e---qr~~yt~VLka~ial~~a~fp~G~~g~ 572 (708)
++||+.|+ +++|++| ++++|+|+.|.+|++|+||||++|. ++++ ++++|+.|++++.+++.+++| |+++.
T Consensus 192 ~~ph~~~~---~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rp-G~~~~ 267 (361)
T PRK09795 192 ALPHGKAS---DKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRP-GVRCQ 267 (361)
T ss_pred cccCCCCC---CceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCC-CCcHH
Confidence 99999985 7899999 9999999999999999999999964 3333 789999999999999888765 99999
Q ss_pred HHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeeccc
Q psy3139 573 RLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYR 641 (708)
Q Consensus 573 ~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~ 641 (708)
++|.++|+.+.+.|+. |.|++||||| |++||.| +.+|+||||||+|||+| .+|+||||+|+||++
T Consensus 268 ~v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~~~~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt~~-- 343 (361)
T PRK09795 268 QVDDAARRVITEAGYGDYFGHNTGHAIG--IEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQ-- 343 (361)
T ss_pred HHHHHHHHHHHHcCCCccCCCCCCccCC--ccccCCCCcCCCCCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEECCC--
Confidence 9999999999999984 7999999999 6999999 36899999999999999 689999999999999
Q ss_pred ccccceeeccCCCccc
Q psy3139 642 ERYMTMEVRSLFPFES 657 (708)
Q Consensus 642 ~~~lgfE~LT~vP~~~ 657 (708)
|+|.||..|.++
T Consensus 344 ----G~e~Lt~~~~~l 355 (361)
T PRK09795 344 ----GAEVLYAMPKTV 355 (361)
T ss_pred ----CcEeCcCCCceE
Confidence 999999999765
No 4
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=2.5e-53 Score=467.07 Aligned_cols=351 Identities=14% Similarity=0.149 Sum_probs=278.1
Q ss_pred cccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCCcHHHHh-
Q psy3139 256 LEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKITPVLRN- 333 (708)
Q Consensus 256 ~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl~~~v~~- 333 (708)
+.|+.+++++|++++|+.|+++++|++|+++++||.||||+++.... ...+++|+.+ +++|+++..... .++.
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~~~----~~~~l~v~~~~~~~l~~~~~~~~-~~~~~ 78 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWSFY----VHQCVLLPPEGEPIWYGRGQDAN-GAKRT 78 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCceE----EEEEEEEcCCCceEEEehhhhhh-hHhhe
Confidence 45888999999999999999999999999999999999999864321 1245667755 566666542221 1111
Q ss_pred -hcCCcEEEeCc-------------cHhhhhhhhhhCCCEEEecCC---chHHHHHHHhhhhhcCccCCCCccccccccc
Q psy3139 334 -YLGDIVIKPYD-------------LVWTDLPEFVRTGKCLYLPDE---ANFLLYAWMKNAETAGFQDDKGYHIEGYWYT 396 (708)
Q Consensus 334 -~l~~v~v~~Y~-------------~~~~~L~~l~~~~~~I~id~~---~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~ 396 (708)
++....+..|. .+.+.|++......+|+++.+ .+...+..|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~-------------------- 138 (391)
T TIGR02993 79 AFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQK-------------------- 138 (391)
T ss_pred eeccccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHH--------------------
Confidence 11111233332 122333333322357999875 47777777663
Q ss_pred cccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Q psy3139 397 WRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL 476 (708)
Q Consensus 397 ~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~ 476 (708)
.+++.++++..+++..+|+|||++||+.||+|+.+...++..+. +.+++| +||.|++..+...
T Consensus 139 -----------~l~~~~~~d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~----~~i~pG--~tE~ei~~~~~~~ 201 (391)
T TIGR02993 139 -----------HLPNARFVDATALVNWQRAVKSETEISYMRVAARIVEKMHQRIF----ERIEPG--MRKCDLVADIYDA 201 (391)
T ss_pred -----------hCCCCEEEehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH----HHhcCC--CCHHHHHHHHHHh
Confidence 26777899999999999999999999999999888777766544 456778 8999999888543
Q ss_pred Hhh-c--CCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHH
Q psy3139 477 RGE-H--WSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTA 552 (708)
Q Consensus 477 r~~-~--~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~ 552 (708)
... . .+...++|.+|+++|+|+++||+.|+ ++++++| ++++|+|+.|.+|++|+||||++|+|+++++++|+.
T Consensus 202 ~~~~~~~~g~~~~~~~~iv~sG~~~a~pH~~~~---~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~ 278 (391)
T TIGR02993 202 GIRGVDGFGGDYPAIVPLLPSGADASAPHLTWD---DSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKA 278 (391)
T ss_pred hhhcccCcCCCcCCcccccccCccccCCCCCCC---CCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHH
Confidence 211 1 12234688889999999999999875 7899999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCCceecCCCCcccc-----CC------CccccCCcEEeeCC
Q psy3139 553 ILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQRVHSIGEFLLVQE-----DF------NSTLNINFFGVVEP 621 (708)
Q Consensus 553 VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGtGHGVG~~L~VHE-----gP------~~~Le~GMV~SiEP 621 (708)
|++++.+++.+++| |+++.++|.++++.+.+.|+...|++||||| +++|+ .| +.+|+||||||+||
T Consensus 279 ~~~a~~~~i~~ikp-G~~~~dv~~~~~~~~~~~G~~~~h~~GhgiG--l~~~~~~~e~~~~l~~~~~~~L~~GMv~tvEp 355 (391)
T TIGR02993 279 VLEGMEAGLEAAKP-GNTCEDIANAFFAVLKKYGIHKDSRTGYPIG--LSYPPDWGERTMSLRPGDNTVLKPGMTFHFMT 355 (391)
T ss_pred HHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccCCCceeeec--cCcCCCCCCccccccCCCCceecCCCEEEEcc
Confidence 99999998877665 9999999999999999999987899999999 56764 22 36899999999999
Q ss_pred ccc--ccCeEEeeEEEEeecccccccceeeccCCCcccccc
Q psy3139 622 EYL--DCGIKIGQVIQVVPAYRERYMTMEVRSLFPFESRLI 660 (708)
Q Consensus 622 GiY--~~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~lI 660 (708)
|+| .+|+||||+|+||++ |+|.||..|.++..+
T Consensus 356 giy~~~~Gvried~v~VT~~------G~e~Lt~~p~~l~~~ 390 (391)
T TIGR02993 356 GLWMEDWGLEITESILITET------GVECLSSVPRKLFVK 390 (391)
T ss_pred eeEeCCCCeEEeeEEEECCC------cceecccCCcccEeC
Confidence 999 789999999999999 999999999887544
No 5
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=8e-50 Score=441.31 Aligned_cols=343 Identities=15% Similarity=0.128 Sum_probs=269.0
Q ss_pred HHHHHHHHhhhCCCCEEEEeccccchhhccccCCCC-CCCcceEEEEEEeCC-c-eE-EEecCCCCcHHHHhh-c----C
Q psy3139 266 KVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDN-PFSPLFKAYFVISTS-L-CV-LYLPKNKITPVLRNY-L----G 336 (708)
Q Consensus 266 Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv-~~~Pvf~aylvv~~d-~-~~-Lfvd~~kl~~~v~~~-l----~ 336 (708)
=++++|+.|+++|+|++++++++|++||||+++..+ ...|...+.++|+.+ + ++ +.++.-... .++.. . .
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~-~~~~~~~~~~~~ 90 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAA-SLTLDMPNAELK 90 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhh-hhcccccccccc
Confidence 478999999999999999999999999999987542 235554566788866 3 45 444432211 12211 0 1
Q ss_pred Cc-EEE----eC------------------c----cHhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCc
Q psy3139 337 DI-VIK----PY------------------D----LVWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGY 388 (708)
Q Consensus 337 ~v-~v~----~Y------------------~----~~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~ 388 (708)
.+ .+. |+ + .+.+.|++....+++|++|.+ .+...+..|++
T Consensus 91 ~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~------------ 158 (406)
T PRK14575 91 TFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDA------------ 158 (406)
T ss_pred cCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHHH------------
Confidence 11 111 22 1 122334333224579999976 67777776653
Q ss_pred cccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHH
Q psy3139 389 HIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELK 468 (708)
Q Consensus 389 ~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~e 468 (708)
.+|+.++++..+.+..+|+|||+.||+.||+|+.+...++.+++ +.+++| +||.|
T Consensus 159 -------------------~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~----~~i~pG--~tE~e 213 (406)
T PRK14575 159 -------------------VMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEAS----KLIRVG--CTSAE 213 (406)
T ss_pred -------------------hCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH----HhccCC--CCHHH
Confidence 26777899999999999999999999999999988877766554 456778 89999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHH
Q psy3139 469 VLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQR 547 (708)
Q Consensus 469 va~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr 547 (708)
+++.+.+.....+.. ..++.+++++|++ +.||+.|+ ++++++| ++++|+|+.|.+|++|+||||++|+||++|+
T Consensus 214 laa~~~~~~~~~g~~-~~~~~~~v~~G~~-~~~h~~~~---~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~ 288 (406)
T PRK14575 214 LTAAYKAAVMSKSET-HFSRFHLISVGAD-FSPKLIPS---NTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITR 288 (406)
T ss_pred HHHHHHHHHHHcCCC-cCCcCceEEECCC-cccCCCCC---CCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHH
Confidence 999986543333222 2223367788987 67898875 7899999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC------CccccCCcEEee
Q psy3139 548 SVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF------NSTLNINFFGVV 619 (708)
Q Consensus 548 ~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~Si 619 (708)
++|+.|++++.+++.+++| |+++.+++..+++.+.+.|+. +.|++|||||+.+++||.| +.+|+||||||+
T Consensus 289 ~~~~~~~~a~~~~~~~~rp-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GMv~ti 367 (406)
T PRK14575 289 KIYQTIRTGHEHMLSMVAP-GVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVLSL 367 (406)
T ss_pred HHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCCCCCCCcCCCCEEEE
Confidence 9999999999999887765 999999999999999999984 5799999999888999999 368999999999
Q ss_pred CCccc---ccCeEEeeEEEEeecccccccceeeccCCCcccc
Q psy3139 620 EPEYL---DCGIKIGQVIQVVPAYRERYMTMEVRSLFPFESR 658 (708)
Q Consensus 620 EPGiY---~~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~ 658 (708)
|||+| .+|+||||+|+||++ |+|.||.+|.++-
T Consensus 368 Epgiy~~g~gGvriEDtvlVT~~------G~e~LT~~p~~l~ 403 (406)
T PRK14575 368 ETPYYGYNLGSIMIEDMILINKE------GIEFLSKLPRDLV 403 (406)
T ss_pred CCeeecCCCcEEEEEeEEEEcCC------CcccCCCCCcccc
Confidence 99999 578999999999999 9999999997653
No 6
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=1.5e-48 Score=430.95 Aligned_cols=342 Identities=15% Similarity=0.114 Sum_probs=266.5
Q ss_pred HHHHHHHhhhCCCCEEEEeccccchhhccccCCCCC-CCcceEEEEEEeCC-c-e-EEEecCCCCcHHHH-----hhcCC
Q psy3139 267 VQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNP-FSPLFKAYFVISTS-L-C-VLYLPKNKITPVLR-----NYLGD 337 (708)
Q Consensus 267 i~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~-~~Pvf~aylvv~~d-~-~-~Lfvd~~kl~~~v~-----~~l~~ 337 (708)
.+|+|+.|+++++|++++++++||+||||+.+..+. ..+....+++++.+ + + .+.++.-.. +.++ ..+..
T Consensus 13 ~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~-~~~~~~~~~~~~~~ 91 (405)
T PRK14576 13 SRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEA-ASTHFDMPNSVLKT 91 (405)
T ss_pred HHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhh-hhhhcccccccccc
Confidence 468999999999999999999999999998866432 22434455566545 2 3 445543211 1111 01111
Q ss_pred c-EEE----eC---------------------ccHhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccc
Q psy3139 338 I-VIK----PY---------------------DLVWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHI 390 (708)
Q Consensus 338 v-~v~----~Y---------------------~~~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~ 390 (708)
+ .+. |. +.+.+.|++++..+++|++|.+ .+...+..+.+
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~-------------- 157 (405)
T PRK14576 92 FPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDK-------------- 157 (405)
T ss_pred CCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHh--------------
Confidence 1 111 11 1222344444334579999976 56665655542
Q ss_pred cccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHH
Q psy3139 391 EGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVL 470 (708)
Q Consensus 391 ~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva 470 (708)
.+|+.++++..+.+..+|+|||+.||+.||+|+.+.+.++.+.+ +.+++| +||.|++
T Consensus 158 -----------------~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~----~~i~pG--~tE~ela 214 (405)
T PRK14576 158 -----------------VAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAA----KKIRVG--CTAAELT 214 (405)
T ss_pred -----------------hCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH----HhccCC--CCHHHHH
Confidence 26777899999999999999999999999999988887776655 456778 8999999
Q ss_pred HHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHH
Q psy3139 471 ECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSV 549 (708)
Q Consensus 471 ~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~ 549 (708)
..++......+.. ..++.+++++|+| +.+|+.|+ ++++++| ++++|+|+.|.+|++|+||||++|+|+++++++
T Consensus 215 a~~~~~~~~~g~~-~~~~~~~v~~G~~-~~~h~~~~---~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~ 289 (405)
T PRK14576 215 AAFKAAVMSFPET-NFSRFNLISVGDN-FSPKIIAD---TTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQI 289 (405)
T ss_pred HHHHHHHHHcCCC-cCCCCCEEEECCc-ccCCCCCC---CcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHH
Confidence 9997654433322 2333378899999 56999875 6899999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC------CccccCCcEEeeCC
Q psy3139 550 YTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEP 621 (708)
Q Consensus 550 yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEP 621 (708)
|+.+++++.+++.+++| |+++.+++.++++.+.+.|+. +.|++|||||+.+.+||.| +.+|+|||||++||
T Consensus 290 ~~~~~~a~~a~~~~~rP-G~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GMv~~vEp 368 (405)
T PRK14576 290 YDTIRTGHEHMLSMVAP-GVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVPFVSTQATETFCPGMVLSLET 368 (405)
T ss_pred HHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCCEEEECC
Confidence 99999999999888765 999999999999999999984 5789999999888999999 36899999999999
Q ss_pred ccc---ccCeEEeeEEEEeecccccccceeeccCCCcccc
Q psy3139 622 EYL---DCGIKIGQVIQVVPAYRERYMTMEVRSLFPFESR 658 (708)
Q Consensus 622 GiY---~~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~ 658 (708)
|+| .+|+||||+|+||++ |.|.||..|.++.
T Consensus 369 ~~y~~g~ggvriEDtvlVTe~------G~e~LT~~p~~l~ 402 (405)
T PRK14576 369 PYYGIGVGSIMLEDMILITDS------GFEFLSKLDRDLR 402 (405)
T ss_pred ceeecCCCEEEEeeEEEECCC------ccccCCCCCcccc
Confidence 999 688999999999999 9999999997653
No 7
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=5.2e-45 Score=406.47 Aligned_cols=346 Identities=16% Similarity=0.192 Sum_probs=259.8
Q ss_pred CcchHhHHHHHHHHhhhCCCCEEEEeccc----------------cchhhccccCCCCCCCcceEEEEEEeC-C----ce
Q psy3139 260 GEPWENKVQSMKDFMSSKSVDVMVITALD----------------QIAWLLNLRGKDNPFSPLFKAYFVIST-S----LC 318 (708)
Q Consensus 260 G~~~~~Ki~rvr~~M~e~g~DallIs~ld----------------nIaWLtnlRG~Dv~~~Pvf~aylvv~~-d----~~ 318 (708)
..++..|++++.+.|.+. .++|+.+.+ |+.||||+. .|= +.+++.+ + ..
T Consensus 3 ~~~~~~rR~~l~~~~~~~--~~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~------ep~--~~lv~~~~~~~~~~~ 72 (438)
T PRK10879 3 QQEFQRRRQALLAKMQPG--SAALIFAAPEATRSADSEYPYRQNSDFWYFTGFN------EPE--AVLVLIKSDDTHNHS 72 (438)
T ss_pred hHHHHHHHHHHHhhCCCC--cEEEEeCCCccccCCCCCCCccCCCceeeeeCCC------CCC--eEEEEecCCCCCCeE
Confidence 457889999999999763 255655533 467777653 222 4455522 2 36
Q ss_pred EEEecCCCCcHHHHh----------hcCC-cEEEeCccHhhhhhhhhhCCCEEEecCCc----hHH---HHHHHhhhhhc
Q psy3139 319 VLYLPKNKITPVLRN----------YLGD-IVIKPYDLVWTDLPEFVRTGKCLYLPDEA----NFL---LYAWMKNAETA 380 (708)
Q Consensus 319 ~Lfvd~~kl~~~v~~----------~l~~-v~v~~Y~~~~~~L~~l~~~~~~I~id~~~----~~~---l~~~l~~~~~a 380 (708)
+||+++.....+++. ..-+ -++.+++++.+.|..+......++.+... +.. ..+.+.+
T Consensus 73 ~Lf~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 148 (438)
T PRK10879 73 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRK---- 148 (438)
T ss_pred EEEeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHh----
Confidence 899987544333221 1112 35888999999998876444556655331 111 1111110
Q ss_pred CccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3139 381 GFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIES 460 (708)
Q Consensus 381 g~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~ 460 (708)
.. .....+..++++....+..+|+||||+||+.||+|+.+.+.++.++++ .+++
T Consensus 149 -------------------~~---~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~----~~~p 202 (438)
T PRK10879 149 -------------------GS---RQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAME----KCRP 202 (438)
T ss_pred -------------------hh---ccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH----hcCC
Confidence 00 000122346677788899999999999999999999999888887764 3567
Q ss_pred CCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEec
Q psy3139 461 GELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHC 539 (708)
Q Consensus 461 G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~ 539 (708)
| +||.++++.+....... +...++|++|+++|+|++++||.|+ +++|++| ++++|+|+.|.+|++|+||||++
T Consensus 203 G--~tE~ei~a~~~~~~~~~-G~~~~~~~~iv~~G~na~~~H~~~~---~~~l~~GDlVliD~G~~~~GY~sDitRT~~v 276 (438)
T PRK10879 203 G--MFEYQLEGEIHHEFNRH-GARYPSYNTIVGSGENGCILHYTEN---ESEMRDGDLVLIDAGCEYKGYAGDITRTFPV 276 (438)
T ss_pred C--CcHHHHHHHHHHHHHHC-CCCCCCCCcEEEEcCccccccCCCC---ccccCCCCEEEEEeCeEECCEEEEeEEEEEE
Confidence 8 89999998887643333 3446889999999999999999975 6889999 99999999999999999999999
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHH----HHcCC----------------CCCCCCceecC
Q psy3139 540 -GIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPL----LALAL----------------DYRPQRVHSIG 598 (708)
Q Consensus 540 -G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L----~~~G~----------------~y~HGtGHGVG 598 (708)
|++|++|+++|+.|++++.+++.+++| |+++.+++.++++.+ ++.|+ .|.||+|||||
T Consensus 277 ~G~~s~~q~~~y~~vl~a~~aai~~~kp-G~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG 355 (438)
T PRK10879 277 NGKFTPAQREIYDIVLESLETSLRLYRP-GTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG 355 (438)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC
Confidence 899999999999999999888877655 999999999988653 34332 37999999999
Q ss_pred CCCccccCC------CccccCCcEEeeCCccc-c-----------cCeEEeeEEEEeecccccccceeecc-CCCccccc
Q psy3139 599 EFLLVQEDF------NSTLNINFFGVVEPEYL-D-----------CGIKIGQVIQVVPAYRERYMTMEVRS-LFPFESRL 659 (708)
Q Consensus 599 ~~L~VHEgP------~~~Le~GMV~SiEPGiY-~-----------~GIRIEn~VlVte~~~~~~lgfE~LT-~vP~~~~l 659 (708)
|++||.| ..+|+||||||+|||+| . +||||||+|+||++ |.|+|| .+|.+.+-
T Consensus 356 --ldvHd~~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~~------G~e~LT~~~pk~~~~ 427 (438)
T PRK10879 356 --LDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITET------GNENLTASVVKKPDE 427 (438)
T ss_pred --cCcCcCCCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECCC------cCeEcCccCCCCHHH
Confidence 7999987 25899999999999999 2 69999999999999 999999 58977644
Q ss_pred c
Q psy3139 660 I 660 (708)
Q Consensus 660 I 660 (708)
|
T Consensus 428 i 428 (438)
T PRK10879 428 I 428 (438)
T ss_pred H
Confidence 4
No 8
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=2.6e-44 Score=386.47 Aligned_cols=268 Identities=16% Similarity=0.130 Sum_probs=222.5
Q ss_pred eCccHhhhhh----hhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeee
Q psy3139 342 PYDLVWTDLP----EFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLT 416 (708)
Q Consensus 342 ~Y~~~~~~L~----~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~ 416 (708)
+++.+.+.|+ +++..+++|++|.+ .+...+..|++ .+|+..+++
T Consensus 36 ~~~~~~~~l~~~l~~~g~~~~rigve~~~~~~~~~~~l~~-------------------------------~l~~~~~~d 84 (323)
T PRK15173 36 PIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDA-------------------------------VMPNVDFVD 84 (323)
T ss_pred cHHHHHHHHHHHHHHcCccCCEEEEecCccCHHHHHHHHh-------------------------------hCCCCeEEE
Confidence 3444444444 44334579999987 67777777663 267778999
Q ss_pred CCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccC
Q psy3139 417 GPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGT 496 (708)
Q Consensus 417 ~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~ 496 (708)
..+++..+|+||||+||+.||+|..+...++..++ +.+++| +||.|+++.+.......+.. ..++.+++++|+
T Consensus 85 ~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~----~~i~~G--~tE~el~a~~~~~~~~~g~~-~~~~~~~i~~G~ 157 (323)
T PRK15173 85 SSSIFNELRVIKSPWEIKRLRKSAEITEYGITEAS----KLIRVG--CTSAELTAAYKAAVMSKSET-HFSRFHLISVGA 157 (323)
T ss_pred hHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHcCCC-CCCCCcEEEECC
Confidence 99999999999999999999999888777766544 456678 89999998886543323221 222335677888
Q ss_pred CCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Q psy3139 497 HATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLE 575 (708)
Q Consensus 497 NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD 575 (708)
+ +.+|+.|+ ++++++| +|++|+|++|.+|++|+||||++|+|+++|+++|+.+++++.+++.+++| |+++.+++
T Consensus 158 ~-~~~h~~~~---~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irP-G~~~~dv~ 232 (323)
T PRK15173 158 D-FSPKLIPS---NTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAP-GVKMKDVF 232 (323)
T ss_pred C-CccCCCCC---CCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHH
Confidence 7 46898764 7899999 99999999999999999999999999999999999999999999988766 99999999
Q ss_pred HHHHHHHHHcCCC--CCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeecccccc
Q psy3139 576 YLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYRERY 644 (708)
Q Consensus 576 ~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~~~~ 644 (708)
..+++.+++.|+. +.|++|||||++|++||.| +.+|+||||||+|||+| .+|+||||+|+||++
T Consensus 233 ~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVTe~----- 307 (323)
T PRK15173 233 DSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVLSLETPYYGYNLGSIMIEDMILINKE----- 307 (323)
T ss_pred HHHHHHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEcCC-----
Confidence 9999999999983 5689999999988999999 36899999999999999 678999999999999
Q ss_pred cceeeccCCCcccc
Q psy3139 645 MTMEVRSLFPFESR 658 (708)
Q Consensus 645 lgfE~LT~vP~~~~ 658 (708)
|+|.||..|.++.
T Consensus 308 -G~e~LT~~p~~l~ 320 (323)
T PRK15173 308 -GIEFLSKLPRDLV 320 (323)
T ss_pred -cceeCCCCCccce
Confidence 9999999997753
No 9
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=3.3e-42 Score=352.48 Aligned_cols=205 Identities=34% Similarity=0.566 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCcccc
Q psy3139 435 GMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIG 514 (708)
Q Consensus 435 ~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~ 514 (708)
+||+|++++++++.+.+.++.+.+++|.++||.|+++.+++++...+++.+.+|++++++|+|++++||.|++.++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~l~ 80 (224)
T cd01085 1 GMRAAHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRKIS 80 (224)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCcccC
Confidence 47999999999999999999999999966899999999998776666677789999999999999999999754589999
Q ss_pred CC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCC
Q psy3139 515 DD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQR 593 (708)
Q Consensus 515 ~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGt 593 (708)
+| +|++|+|+.|.+|++|+||||++|+|+++|+++|+.++++++++..+.+++|+++.++|.++|+.+++.|++|.|++
T Consensus 81 ~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~h~~ 160 (224)
T cd01085 81 PDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGHGT 160 (224)
T ss_pred CCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99 99999999999999999999999999999999999999999999888888899999999999999999999999999
Q ss_pred ceecCCCCccccCCC--------ccccCCcEEeeCCccc---ccCeEEeeEEEEeec
Q psy3139 594 VHSIGEFLLVQEDFN--------STLNINFFGVVEPEYL---DCGIKIGQVIQVVPA 639 (708)
Q Consensus 594 GHGVG~~L~VHEgP~--------~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~ 639 (708)
|||||.+|++||.|. .+|+||||||+|||+| .+||||||+|+||++
T Consensus 161 GHgIG~~l~~hE~P~i~~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt~~ 217 (224)
T cd01085 161 GHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVVEA 217 (224)
T ss_pred CCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEeeC
Confidence 999997779999982 4799999999999999 689999999999998
No 10
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2e-40 Score=369.65 Aligned_cols=216 Identities=17% Similarity=0.135 Sum_probs=182.7
Q ss_pred CCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccC
Q psy3139 417 GPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGT 496 (708)
Q Consensus 417 ~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~ 496 (708)
....+..+|+|||+.||+.||+|+.+.+.++..++ +.+++| +||.+++..+.... ..+..+.+|++|+++|+
T Consensus 151 l~~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~----~~i~pG--~tE~ei~~~~~~~~--~~~~~~~~y~~iva~G~ 222 (443)
T PRK13607 151 VLDYLHYHRAYKTDYELACMREAQKIAVAGHRAAK----EAFRAG--MSEFDINLAYLTAT--GQRDNDVPYGNIVALNE 222 (443)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH----HHhhcC--CCHHHHHHHHHHHh--CCCCcCCCCCcEEEecC
Confidence 44668899999999999999999988888776665 445678 89999987554321 22234579999999999
Q ss_pred CCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Q psy3139 497 HATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLE 575 (708)
Q Consensus 497 NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD 575 (708)
|++++||.|+. .+++++| ++++|+|+.|.+|++|+||||+ |+++++++++|+.|++++.+++.+++| |+++.+++
T Consensus 223 naa~~H~~~~~--~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikP-G~~~~dv~ 298 (443)
T PRK13607 223 HAAVLHYTKLD--HQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKP-GVSYVDLH 298 (443)
T ss_pred cceEecCCccC--CCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccC-CCCHHHHH
Confidence 99999999863 3468999 9999999999999999999999 999999999999999999998877665 99999999
Q ss_pred HHHHHHHH----Hc--------------CC---CCCCCCceecCCCCccccCC----------------------Ccccc
Q psy3139 576 YLLEQPLL----AL--------------AL---DYRPQRVHSIGEFLLVQEDF----------------------NSTLN 612 (708)
Q Consensus 576 ~~AR~~L~----~~--------------G~---~y~HGtGHGVG~~L~VHEgP----------------------~~~Le 612 (708)
.+|++.+. +. |+ .|.||+||||| |+|||.| ..+|+
T Consensus 299 ~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iG--ldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~ 376 (443)
T PRK13607 299 IQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLG--LQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLE 376 (443)
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccC--cccccCCCcccccccccccccccccccccCCcCC
Confidence 99987663 22 33 36999999999 7999973 25899
Q ss_pred CCcEEeeCCccc--c--------------------------cCeEEeeEEEEeecccccccceeeccC
Q psy3139 613 INFFGVVEPEYL--D--------------------------CGIKIGQVIQVVPAYRERYMTMEVRSL 652 (708)
Q Consensus 613 ~GMV~SiEPGiY--~--------------------------~GIRIEn~VlVte~~~~~~lgfE~LT~ 652 (708)
||||||+|||+| . +||||||+|+||++ |+|+||.
T Consensus 377 ~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~------G~e~Lt~ 438 (443)
T PRK13607 377 PGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHEN------GVENMTR 438 (443)
T ss_pred CCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCC------CCeECCh
Confidence 999999999999 2 29999999999999 9999984
No 11
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-39 Score=337.34 Aligned_cols=209 Identities=14% Similarity=0.123 Sum_probs=183.5
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCC----CCCCCCccccccCCCCCc
Q psy3139 426 AYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSY----IGNSFPPTAAHGTHATDA 501 (708)
Q Consensus 426 aiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~----~~~SF~tIva~G~NaAi~ 501 (708)
.||||+||+.||+|+++...++..++ +.+++| +||.|+++.++....+.+.. ...+|++++++|+|++++
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~----~~~~~G--~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~ 76 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIA----KIMKPG--ITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMC 76 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHH----hhcCCC--CcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEee
Confidence 69999999999999988777765544 567789 89999999998754433321 135788888899999999
Q ss_pred ccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Q psy3139 502 EYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQ 580 (708)
Q Consensus 502 Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~ 580 (708)
||.|+ +++|++| +|++|+|++|.+|++|+||||++|+|+++|+++|+.+++++.+++.++.| |++..+++.++++
T Consensus 77 H~~p~---~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kp-G~~~~dv~~a~~~ 152 (248)
T PRK12897 77 HAFPA---DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVI-GNRVGDIGYAIES 152 (248)
T ss_pred cCCCC---CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCccchHHHHHHH
Confidence 99986 6899999 99999999999999999999999999999999999999999888877765 9999999999999
Q ss_pred HHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCcccc--------------------cCeE
Q psy3139 581 PLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYLD--------------------CGIK 629 (708)
Q Consensus 581 ~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY~--------------------~GIR 629 (708)
.+.+.|+. +.|++||||| |++||.| ..+|+||||||+|||+|. +|+|
T Consensus 153 ~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r 230 (248)
T PRK12897 153 YVANEGFSVARDFTGHGIG--KEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQ 230 (248)
T ss_pred HHHHcCCccCCCeEECccC--CcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEee
Confidence 99999985 5899999999 6999999 147999999999999981 5899
Q ss_pred EeeEEEEeecccccccceeeccC
Q psy3139 630 IGQVIQVVPAYRERYMTMEVRSL 652 (708)
Q Consensus 630 IEn~VlVte~~~~~~lgfE~LT~ 652 (708)
+||+|+||++ |.|.||.
T Consensus 231 ~edtv~Vt~~------G~e~lt~ 247 (248)
T PRK12897 231 YEHTIAITKD------GPIILTK 247 (248)
T ss_pred cceEEEEeCC------ccEEeec
Confidence 9999999999 9999985
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.6e-39 Score=342.10 Aligned_cols=215 Identities=14% Similarity=0.118 Sum_probs=185.9
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcC------CCC--CCCCCccccccC
Q psy3139 425 KAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHW------SYI--GNSFPPTAAHGT 496 (708)
Q Consensus 425 RaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~------~~~--~~SF~tIva~G~ 496 (708)
-.+|||+||+.||+|+.+...++.. +.+.+++| +||.|+++.++....+.+ ++. ..+|++++++|.
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~----~~~~i~pG--~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~ 75 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIG----LRDLIKPG--VDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGL 75 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH----HHHHCcCC--CcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEec
Confidence 4699999999999998777665544 45667889 899999998876543322 111 268999999999
Q ss_pred CCCCcccCCCCCCCccccCC-eEEEEeec---------------------------ccCCcccceeeEEecCCCCHHHHH
Q psy3139 497 HATDAEYRPDAKTNVKIGDD-ILRVSYGS---------------------------QYLDGTTKVNAILHCGIPTPLQRS 548 (708)
Q Consensus 497 NaAi~Hy~p~~~t~~~l~~g-llLiDsG~---------------------------qY~~gtTDiTRTv~~G~pt~eqr~ 548 (708)
|++++|+.|+ +++|++| ++++|+|+ .|.+|++|+||||++|+|++++++
T Consensus 76 n~~~~H~~p~---~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~ 152 (286)
T PRK07281 76 NDEVAHAFPR---HYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKN 152 (286)
T ss_pred cccccCCCCC---CcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHH
Confidence 9999999986 7899999 99999997 488899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEE
Q psy3139 549 VYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFG 617 (708)
Q Consensus 549 ~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~ 617 (708)
+|+.+++++.+++.+++| |+++.+++.++++.+.+.|+. +.|++||||| |++||.| +.+|+|||||
T Consensus 153 l~~~~~ea~~~ai~~~kp-G~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG--l~~hE~P~i~~~~~~~~~~~Le~GMV~ 229 (286)
T PRK07281 153 LMDVTKEAMYRGIEQAVV-GNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG--PTMHEEPMVPNYGTAGRGLRLREGMVL 229 (286)
T ss_pred HHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC--CccCCCCcCCCcccCCCCCEECCCCEE
Confidence 999999999998887765 999999999999999999984 7899999999 6999988 1479999999
Q ss_pred eeCCccc--c-------------------cCeEEeeEEEEeecccccccceeeccCCCccc
Q psy3139 618 VVEPEYL--D-------------------CGIKIGQVIQVVPAYRERYMTMEVRSLFPFES 657 (708)
Q Consensus 618 SiEPGiY--~-------------------~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~ 657 (708)
|+|||+| . +|+|+||+|+||++ |+|.||..+.++
T Consensus 230 tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~------G~e~LT~~~~~~ 284 (286)
T PRK07281 230 TIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKD------GPVILTSQGEER 284 (286)
T ss_pred EECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCC------cceECCCCCccc
Confidence 9999998 1 25899999999999 999999877654
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2.6e-38 Score=335.53 Aligned_cols=219 Identities=15% Similarity=0.140 Sum_probs=187.4
Q ss_pred chhHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC------CCCCCCCcc
Q psy3139 419 SPVKDLKA-YKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS------YIGNSFPPT 491 (708)
Q Consensus 419 ~pI~~lRa-iKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~------~~~~SF~tI 491 (708)
+.+..++. ||||.||+.||+|+.+.+.++..++ +.+++| +||.|+++.+..+....+. +..++|+++
T Consensus 34 ~~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~----~~irpG--~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~ 107 (291)
T PRK12318 34 LYASQYDIIIKTPEQIEKIRKACQVTARILDALC----EAAKEG--VTTNELDELSRELHKEYNAIPAPLNYGSPPFPKT 107 (291)
T ss_pred hccCCCceEECCHHHHHHHHHHHHHHHHHHHHHH----HhccCC--CCHHHHHHHHHHHHHHcCCCccccccCCCCCCcc
Confidence 33445665 9999999999999988877766554 566788 8999999877665333222 334689999
Q ss_pred ccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy3139 492 AAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSS 570 (708)
Q Consensus 492 va~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~ 570 (708)
+++|.|++++||.|+ +++|++| ++++|+|+.|.+|++|+||||++|+|+++++++|+.+++++.+++.+++| |++
T Consensus 108 v~~g~n~~~~H~~p~---~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~ 183 (291)
T PRK12318 108 ICTSLNEVICHGIPN---DIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKP-GIP 183 (291)
T ss_pred eEeeccceeecCCCC---CCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCC
Confidence 999999999999985 7899999 99999999999999999999999999999999999999999998887765 999
Q ss_pred hHHHHHHHHHHHHHcCCC-CCCCCceecCCCCccccCCC---------ccccCCcEEeeCCccc---cc---------Ce
Q psy3139 571 LHRLEYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDFN---------STLNINFFGVVEPEYL---DC---------GI 628 (708)
Q Consensus 571 g~~lD~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP~---------~~Le~GMV~SiEPGiY---~~---------GI 628 (708)
..+++.++++.+.+.|+. +.|.+||||| |++||.|. .+|+|||||++|||+| .+ |+
T Consensus 184 ~~dv~~a~~~~~~~~G~~~~~~~~GHgIG--l~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~ 261 (291)
T PRK12318 184 LYEIGEVIENCADKYGFSVVDQFVGHGVG--IKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEA 261 (291)
T ss_pred HHHHHHHHHHHHHHcCCccCCCcccCCcC--ccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEE
Confidence 999999999999999985 5789999999 79999992 4799999999999998 22 23
Q ss_pred E---------EeeEEEEeecccccccceeeccCCCc
Q psy3139 629 K---------IGQVIQVVPAYRERYMTMEVRSLFPF 655 (708)
Q Consensus 629 R---------IEn~VlVte~~~~~~lgfE~LT~vP~ 655 (708)
| +||+|+||++ |+|.||..|.
T Consensus 262 ~~~~g~~~~~~edtv~VTe~------G~e~LT~~~~ 291 (291)
T PRK12318 262 RTCDNQPSAQWEHTILITET------GYEILTLLDK 291 (291)
T ss_pred EecCCCeeeeeeeEEEEcCC------cceeCCCCCC
Confidence 4 6999999999 9999998873
No 14
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=3.1e-38 Score=326.04 Aligned_cols=209 Identities=15% Similarity=0.158 Sum_probs=182.0
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC---C-CCCCCCccccccCCCCCc
Q psy3139 426 AYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS---Y-IGNSFPPTAAHGTHATDA 501 (708)
Q Consensus 426 aiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~---~-~~~SF~tIva~G~NaAi~ 501 (708)
+||||.||+.||+|+.+...++..++ +.+++| +||.|++..+.....+.+. + ...+|++++++|+|++++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~----~~i~~G--~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~ 75 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELE----REVKPG--VSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVI 75 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHH----HhccCC--CCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEE
Confidence 79999999999999887776665444 567788 8999999888765433221 1 124788888999999999
Q ss_pred ccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Q psy3139 502 EYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQ 580 (708)
Q Consensus 502 Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~ 580 (708)
||.|+ +++|++| ++++|+|++|.+|++|+|||+++|+|+++|+++|+.+++++.+++.+++| |+++.+++.++++
T Consensus 76 H~~~~---~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~~~ 151 (247)
T TIGR00500 76 HGIPD---KKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKP-GNRIGEIGAAIQK 151 (247)
T ss_pred ecCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 99986 7999999 99999999999999999999999999999999999999999998887665 9999999999999
Q ss_pred HHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc-c-------------------cCeE
Q psy3139 581 PLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL-D-------------------CGIK 629 (708)
Q Consensus 581 ~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY-~-------------------~GIR 629 (708)
.+.+.|+. +.|.+||||| +++||.| +.+|+||||||+|||+| . +|+|
T Consensus 152 ~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~r 229 (247)
T TIGR00500 152 YAEAKGFSVVREYCGHGIG--RKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQ 229 (247)
T ss_pred HHHHcCCEeccCccCCccC--cccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEE
Confidence 99999985 5788999999 5899998 25799999999999998 2 4899
Q ss_pred EeeEEEEeecccccccceeeccC
Q psy3139 630 IGQVIQVVPAYRERYMTMEVRSL 652 (708)
Q Consensus 630 IEn~VlVte~~~~~~lgfE~LT~ 652 (708)
|||+|+||++ |.|.||.
T Consensus 230 ied~v~Vt~~------G~e~Lt~ 246 (247)
T TIGR00500 230 FEHTIVITDN------GPEILTE 246 (247)
T ss_pred EeEEEEEcCC------ccEEccC
Confidence 9999999999 9999984
No 15
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=4.1e-37 Score=318.08 Aligned_cols=215 Identities=14% Similarity=0.106 Sum_probs=185.6
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC---C-CCCCCCccccccCCCC
Q psy3139 424 LKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS---Y-IGNSFPPTAAHGTHAT 499 (708)
Q Consensus 424 lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~---~-~~~SF~tIva~G~NaA 499 (708)
+=+||||+||+.||+|+.+...++..++ +.+++| +||.|+++.+.......+. + ...+|++++++|.|++
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~----~~i~pG--~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~ 75 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIE----PHVKPG--VTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEV 75 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccce
Confidence 3479999999999999887777665544 566778 8999999887654332221 2 2357888888999999
Q ss_pred CcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHH
Q psy3139 500 DAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLL 578 (708)
Q Consensus 500 i~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~A 578 (708)
.+||.|+ +++|++| ++++|+|+.|.+|++|+|||+++|+|+++++++|+.+++++.++..+++| |+++.+++.++
T Consensus 76 ~~h~~~~---~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~dv~~~~ 151 (252)
T PRK05716 76 VCHGIPS---DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKP-GARLGDIGHAI 151 (252)
T ss_pred eecCCCC---CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHH
Confidence 9999875 6899999 99999999999999999999999999999999999999999999887765 99999999999
Q ss_pred HHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc-c-------------------cC
Q psy3139 579 EQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL-D-------------------CG 627 (708)
Q Consensus 579 R~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY-~-------------------~G 627 (708)
++.+.+.|+. ..|.+||||| +.+||.| +.+|+|||||++||++| . +|
T Consensus 152 ~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g 229 (252)
T PRK05716 152 QKYAEAEGFSVVREYCGHGIG--RKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLS 229 (252)
T ss_pred HHHHHHcCCeeecCccccccC--CccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcE
Confidence 9999999985 5788999999 5899998 25799999999999998 1 47
Q ss_pred eEEeeEEEEeecccccccceeeccCCCcc
Q psy3139 628 IKIGQVIQVVPAYRERYMTMEVRSLFPFE 656 (708)
Q Consensus 628 IRIEn~VlVte~~~~~~lgfE~LT~vP~~ 656 (708)
+||||+|+||++ |+|.||..|.+
T Consensus 230 ~~~ed~v~Vt~~------G~e~Lt~~~~~ 252 (252)
T PRK05716 230 AQYEHTVAVTED------GPEILTLRPEE 252 (252)
T ss_pred EeeeeEEEEcCC------ccEEeeCCCCC
Confidence 999999999999 99999998864
No 16
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1.2e-36 Score=313.58 Aligned_cols=199 Identities=19% Similarity=0.172 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCcc
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVK 512 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~ 512 (708)
|+.||+|+.+...++.+++ +.+++| +||.|++..++....+.+.. ++|++++++|+|++.+|+.|+ +++
T Consensus 1 i~~lr~A~~i~~~~~~~~~----~~i~pG--~tE~ei~~~~~~~~~~~G~~--~~~~~~v~~g~~~~~~H~~~~---~~~ 69 (243)
T cd01087 1 IELMRKACDISAEAHRAAM----KASRPG--MSEYELEAEFEYEFRSRGAR--LAYSYIVAAGSNAAILHYVHN---DQP 69 (243)
T ss_pred CHHHHHHHHHHHHHHHHHH----HHCcCC--CcHHHHHHHHHHHHHHcCCC--cCCCCeEEECCCccccCCCcC---CCc
Confidence 6889999887777766544 556778 89999999998754444322 689999999999999999985 789
Q ss_pred ccCC-eEEEEeecccCCcccceeeEEec-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcC----
Q psy3139 513 IGDD-ILRVSYGSQYLDGTTKVNAILHC-GIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALA---- 586 (708)
Q Consensus 513 l~~g-llLiDsG~qY~~gtTDiTRTv~~-G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G---- 586 (708)
|++| ++++|+|++|.+|++|+||||++ |+|+++++++|+.+++++.+++.+++| |+++.+++.++++.+.+.|
T Consensus 70 l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rp-G~~~~~v~~a~~~~~~~~~~~~g 148 (243)
T cd01087 70 LKDGDLVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKP-GVSYEDIHLLAHRVLAEGLKELG 148 (243)
T ss_pred CCCCCEEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999 99999999999999999999999 699999999999999999999887765 9999999999999987653
Q ss_pred C----------------CCCCCCceecCCCCccccCC--------CccccCCcEEeeCCccc--c-----------cCeE
Q psy3139 587 L----------------DYRPQRVHSIGEFLLVQEDF--------NSTLNINFFGVVEPEYL--D-----------CGIK 629 (708)
Q Consensus 587 ~----------------~y~HGtGHGVG~~L~VHEgP--------~~~Le~GMV~SiEPGiY--~-----------~GIR 629 (708)
+ .|.|++||||| |++||.| +.+|+||||||+|||+| . +|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~h~~GhgiG--l~~~e~p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ 226 (243)
T cd01087 149 ILKGDVDEIVESGAYAKFFPHGLGHYLG--LDVHDVGGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIR 226 (243)
T ss_pred cccCchHhhhhhhhhhhhcCCCCccccC--cccccCccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEE
Confidence 1 36899999999 6999987 26899999999999999 3 5899
Q ss_pred EeeEEEEeecccccccceeecc
Q psy3139 630 IGQVIQVVPAYRERYMTMEVRS 651 (708)
Q Consensus 630 IEn~VlVte~~~~~~lgfE~LT 651 (708)
|||+|+||++ |+|.||
T Consensus 227 ied~v~Vt~~------G~e~Lt 242 (243)
T cd01087 227 IEDDVLVTED------GPENLT 242 (243)
T ss_pred eeeEEEEcCC------cceeCc
Confidence 9999999999 999998
No 17
>KOG2737|consensus
Probab=100.00 E-value=2.4e-36 Score=317.64 Aligned_cols=229 Identities=19% Similarity=0.188 Sum_probs=197.0
Q ss_pred chhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCC
Q psy3139 419 SPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHA 498 (708)
Q Consensus 419 ~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~Na 498 (708)
..+.+.|.||++.||+.||.|+.+.+.|..+.|. .+++| +.|+++....+...-.+++.+..|+..|+++|+|+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~----~~~pg--~~Eyq~eslF~hh~y~~GGcRh~sYtcIc~sG~ns 250 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMR----AVRPG--MKEYQLESLFLHHSYSYGGCRHLSYTCICASGDNS 250 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHH----hCCch--HhHHhHHHHHHHhhhccCCccccccceeeecCCCc
Confidence 3567999999999999999999999999988874 45678 89999988776654455667788999999999999
Q ss_pred CCcccCC-CCCCCccccCC-eEEEEeecccCCcccceeeEEec-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Q psy3139 499 TDAEYRP-DAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHC-GIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLE 575 (708)
Q Consensus 499 Ai~Hy~p-~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~-G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD 575 (708)
++.||.+ ..++++.|++| +.|+|.|+.|..|++|||++|+. |+.|++||.+|.+||.++.++..+..| |+...++|
T Consensus 251 ~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~Kp-Gv~W~Dmh 329 (492)
T KOG2737|consen 251 AVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKP-GVWWVDMH 329 (492)
T ss_pred ceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCC-CCccccHH
Confidence 9999933 33468999999 99999999999999999999998 999999999999999999998888765 99999999
Q ss_pred HHHHHHHHHc----CC----------------CCCCCCceecCCCCcccc---CC----------------CccccCCcE
Q psy3139 576 YLLEQPLLAL----AL----------------DYRPQRVHSIGEFLLVQE---DF----------------NSTLNINFF 616 (708)
Q Consensus 576 ~~AR~~L~~~----G~----------------~y~HGtGHGVG~~L~VHE---gP----------------~~~Le~GMV 616 (708)
.+|.+.|.++ |+ -++||.||=+| |+||+ .| .+.|++|||
T Consensus 330 ~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lG--lDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~Mv 407 (492)
T KOG2737|consen 330 KLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLG--LDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMV 407 (492)
T ss_pred HHHHHHHHHHHHhcCceeccHHHHHHhccCeeecccccccccc--ccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcE
Confidence 9998866442 32 26899999999 79997 12 147999999
Q ss_pred EeeCCccc--c---------------------------cCeEEeeEEEEeecccccccceeeccCCCcccccccc
Q psy3139 617 GVVEPEYL--D---------------------------CGIKIGQVIQVVPAYRERYMTMEVRSLFPFESRLIDT 662 (708)
Q Consensus 617 ~SiEPGiY--~---------------------------~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~lId~ 662 (708)
+|+|||.| + +||||||+|+||++ |+|+||.+|.+..-|+.
T Consensus 408 iTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~------G~enlt~vprtveeIEa 476 (492)
T KOG2737|consen 408 ITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKS------GIENLTCVPRTVEEIEA 476 (492)
T ss_pred EEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEecc------ccccccCCCCCHHHHHH
Confidence 99999999 1 48999999999999 99999999988765544
No 18
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.3e-36 Score=313.02 Aligned_cols=211 Identities=16% Similarity=0.087 Sum_probs=183.2
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC---C-CCCCCCccccccCCCC
Q psy3139 424 LKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS---Y-IGNSFPPTAAHGTHAT 499 (708)
Q Consensus 424 lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~---~-~~~SF~tIva~G~NaA 499 (708)
+++|||+.||+.||+|+.+...++.+++ +.+++| +||.|++..+.+.....+. + ...+|++++++|.|.+
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~----~~i~pG--~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~ 80 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMG----KAVEPG--MTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEE 80 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHH----hhccCC--CCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCe
Confidence 4589999999999999988887776554 566788 8999999888764332221 1 1356888888899999
Q ss_pred CcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHH
Q psy3139 500 DAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLL 578 (708)
Q Consensus 500 i~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~A 578 (708)
++||.|+ +++|++| ++++|+|+.|.+|++|+|||+++|+|+++++++|+.+++++.++..+++| |+++.+++.++
T Consensus 81 ~~h~~p~---~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kp-G~~~~~v~~~~ 156 (255)
T PRK12896 81 VAHGIPG---PRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKA-GRPLNDIGRAI 156 (255)
T ss_pred eEecCCC---CccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHH
Confidence 9999885 5899999 99999999999999999999999999999999999999999999887765 99999999999
Q ss_pred HHHHHHcCCC-CCCCCceecCCCCccccCC-----------CccccCCcEEeeCCccc--------------------cc
Q psy3139 579 EQPLLALALD-YRPQRVHSIGEFLLVQEDF-----------NSTLNINFFGVVEPEYL--------------------DC 626 (708)
Q Consensus 579 R~~L~~~G~~-y~HGtGHGVG~~L~VHEgP-----------~~~Le~GMV~SiEPGiY--------------------~~ 626 (708)
++.+.+.|+. +.|.+||||| +.+||.| +.+|+|||||++||++| .+
T Consensus 157 ~~~~~~~G~~~~~~~~GHgiG--~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~ 234 (255)
T PRK12896 157 EDFAKKNGYSVVRDLTGHGVG--RSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSL 234 (255)
T ss_pred HHHHHHcCCEeccCcccCCcC--cccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCe
Confidence 9999999985 5799999999 5899998 24799999999999997 24
Q ss_pred CeEEeeEEEEeecccccccceeeccC
Q psy3139 627 GIKIGQVIQVVPAYRERYMTMEVRSL 652 (708)
Q Consensus 627 GIRIEn~VlVte~~~~~~lgfE~LT~ 652 (708)
|+|+||+|+||++ |+|.||.
T Consensus 235 ~~~~edtv~vt~~------G~e~Lt~ 254 (255)
T PRK12896 235 SAQFEHTVVVTRD------GPEILTD 254 (255)
T ss_pred EEEEEEEEEEcCC------cceecCC
Confidence 8999999999999 9999984
No 19
>KOG2414|consensus
Probab=100.00 E-value=9.4e-36 Score=316.15 Aligned_cols=369 Identities=18% Similarity=0.195 Sum_probs=256.8
Q ss_pred CCCCCCCCcceeccccc----CCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCC----cce------
Q psy3139 242 PKPSLPPSVVFIHPLEY----AGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFS----PLF------ 307 (708)
Q Consensus 242 ~rp~~~~~~~~~~~~~~----~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~----Pvf------ 307 (708)
.+|.....|-.+.|-+. +-.|+..|+.++.+.|.++ +++|-....+.|++| +++|. +=|
T Consensus 42 GQpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~---a~~il~sap~~~msg----~ipY~f~Qd~df~YLtGc 114 (488)
T KOG2414|consen 42 GQPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPAN---AMVILGSAPVKYMSG----AIPYTFRQDNDFYYLTGC 114 (488)
T ss_pred CCCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCcc---cEEEEccCchhhhcC----ccceeeecCCCeEEEecc
Confidence 57777777777776554 3468889999999988874 466666666666654 22221 001
Q ss_pred ---EEEEEEe-CC----ceEEEecCCCCcHHHHhhcC-C----cEEE------eCccHhhhhhhhhhCCCEEEecCCchH
Q psy3139 308 ---KAYFVIS-TS----LCVLYLPKNKITPVLRNYLG-D----IVIK------PYDLVWTDLPEFVRTGKCLYLPDEANF 368 (708)
Q Consensus 308 ---~aylvv~-~d----~~~Lfvd~~kl~~~v~~~l~-~----v~v~------~Y~~~~~~L~~l~~~~~~I~id~~~~~ 368 (708)
.+-+++. .| ...+|++++....+.++-.. + +++. +-.++...|.+..+...+||.+...+.
T Consensus 115 ~EP~~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ss~ 194 (488)
T KOG2414|consen 115 LEPDAVLLLLKGDERSVAYDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKASSK 194 (488)
T ss_pred CCCCeeEEEeecccccceeeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhccch
Confidence 1222332 11 24577777655555544321 1 1111 222333444433322345666654211
Q ss_pred HHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHH
Q psy3139 369 LLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWV 448 (708)
Q Consensus 369 ~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~ 448 (708)
..+++++ ++.+.+. .....++....+.+.++|.||||+|++.||+|+.+.+.++.
T Consensus 195 -a~s~~~~-----------------~~dl~~~-------~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~ 249 (488)
T KOG2414|consen 195 -ASSALKN-----------------MQDLLGF-------QSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFS 249 (488)
T ss_pred -hhhHHHH-----------------HHhhhhh-------cccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHH
Confidence 1112111 0000000 11123567778899999999999999999999988887765
Q ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHH-HHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeeccc
Q psy3139 449 RLVHRIEKGIESGELWDELKVLECVDQ-LRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQY 526 (708)
Q Consensus 449 ~~l~~l~~~i~~G~~~TE~eva~~l~~-~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY 526 (708)
+.+. .-++. ..|..+.+.++. +|..+ .....|+++||.|.|+..+||.-+ +..++++ +||+|.||.+
T Consensus 250 ~~m~----~sr~~--~~E~~l~a~~eye~r~rG--ad~~AYpPVVAgG~na~tIHY~~N---nq~l~d~emVLvDaGcel 318 (488)
T KOG2414|consen 250 ETMF----GSRDF--HNEAALSALLEYECRRRG--ADRLAYPPVVAGGKNANTIHYVRN---NQLLKDDEMVLVDAGCEL 318 (488)
T ss_pred HHHh----hccCC--cchhhHhhhhhhheeecC--ccccccCCeeecCcccceEEEeec---ccccCCCcEEEEecCccc
Confidence 5442 11223 689999988885 55433 345789999999999999999854 7889999 9999999999
Q ss_pred CCcccceeeEEec-CCCCHHHHHHHHHHHHHHHHHHHhcCCC-CCchHHHHHHHH----HHHHHcCC-------------
Q psy3139 527 LDGTTKVNAILHC-GIPTPLQRSVYTAILKGLIALVTTQFLP-GSSLHRLEYLLE----QPLLALAL------------- 587 (708)
Q Consensus 527 ~~gtTDiTRTv~~-G~pt~eqr~~yt~VLka~ial~~a~fp~-G~~g~~lD~~AR----~~L~~~G~------------- 587 (708)
.||++||||||++ |+.|+.|+++|++||..|..++.-.+|+ |++-++|....- +.|.+.|.
T Consensus 319 gGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~k 398 (488)
T KOG2414|consen 319 GGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEK 398 (488)
T ss_pred CceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhh
Confidence 9999999999998 9999999999999999999998887774 677776654333 44555554
Q ss_pred CCCCCCceecCCCCccccCC----CccccCCcEEeeCCccc------------ccCeEEeeEEEEeecccccccceeecc
Q psy3139 588 DYRPQRVHSIGEFLLVQEDF----NSTLNINFFGVVEPEYL------------DCGIKIGQVIQVVPAYRERYMTMEVRS 651 (708)
Q Consensus 588 ~y~HGtGHGVG~~L~VHEgP----~~~Le~GMV~SiEPGiY------------~~GIRIEn~VlVte~~~~~~lgfE~LT 651 (708)
-++|+.||=+| |+||+-| +.+|+||||||||||+| ..||||||+|+|+++ |.|+||
T Consensus 399 lcPHhVgHyLG--mDVHD~p~v~r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~ed------g~evLT 470 (488)
T KOG2414|consen 399 LCPHHVGHYLG--MDVHDCPTVSRDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGED------GPEVLT 470 (488)
T ss_pred cCCcccchhcC--cccccCCCCCCCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccC------Cceeeh
Confidence 26899999999 6999999 57999999999999999 258999999999999 999999
Q ss_pred -CCCccccccc
Q psy3139 652 -LFPFESRLID 661 (708)
Q Consensus 652 -~vP~~~~lId 661 (708)
.||.|.+-|.
T Consensus 471 ~a~pKei~~ie 481 (488)
T KOG2414|consen 471 AACPKEIIEIE 481 (488)
T ss_pred hcccCCHHHHH
Confidence 8898775443
No 20
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=3.6e-36 Score=308.55 Aligned_cols=201 Identities=14% Similarity=0.031 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcC--CCCCC---CCCccccccCCCCCcccCCCC
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHW--SYIGN---SFPPTAAHGTHATDAEYRPDA 507 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~--~~~~~---SF~tIva~G~NaAi~Hy~p~~ 507 (708)
|+.||+|..+...++.+++ +.+++| +||.|+++.+.+...+.+ ++... ++.+++++|+|++.+|+.|+
T Consensus 1 I~~ir~Aa~i~d~~~~~~~----~~i~pG--~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~- 73 (228)
T cd01090 1 IALIRHGARIADIGGAAVV----EAIREG--VPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVT- 73 (228)
T ss_pred CHHHHHHHHHHHHHHHHHH----HHhcCC--CCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCC-
Confidence 6789999888777776655 456678 899999888766433222 11111 23367899999999999875
Q ss_pred CCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcC
Q psy3139 508 KTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALA 586 (708)
Q Consensus 508 ~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G 586 (708)
+++|++| +|++|+|+.|.+|++|++|||++|+|+++|+++|+.+++++.++..+++| |+++.++|.++++.+.+.|
T Consensus 74 --~r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rp-G~~~~~v~~a~~~~~~~~G 150 (228)
T cd01090 74 --NRKVQRGDILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKP-GARCKDIAAELNEMYREHD 150 (228)
T ss_pred --CcccCCCCEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcC
Confidence 7899999 99999999999999999999999999999999999999999998877765 9999999999999999999
Q ss_pred CC--CCCCCceecCCCCccccCC-----------CccccCCcEEeeCCccc-------ccCeEEeeEEEEeecccccccc
Q psy3139 587 LD--YRPQRVHSIGEFLLVQEDF-----------NSTLNINFFGVVEPEYL-------DCGIKIGQVIQVVPAYRERYMT 646 (708)
Q Consensus 587 ~~--y~HGtGHGVG~~L~VHEgP-----------~~~Le~GMV~SiEPGiY-------~~GIRIEn~VlVte~~~~~~lg 646 (708)
+. +.|++||||| |.+||.| +.+|+||||||+|||+| .+|+|+||+|+||++ |
T Consensus 151 ~~~~~~~~~GHgiG--l~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~~------G 222 (228)
T cd01090 151 LLRYRTFGYGHSFG--VLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINEN------G 222 (228)
T ss_pred CCcccccccCcccc--cccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECCC------c
Confidence 83 6899999999 5889876 26899999999999998 268999999999999 9
Q ss_pred eeecc
Q psy3139 647 MEVRS 651 (708)
Q Consensus 647 fE~LT 651 (708)
+|.||
T Consensus 223 ~e~Lt 227 (228)
T cd01090 223 AENIT 227 (228)
T ss_pred cccCc
Confidence 99998
No 21
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.6e-35 Score=325.03 Aligned_cols=224 Identities=16% Similarity=0.148 Sum_probs=192.4
Q ss_pred chhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCC----CCCCCccccc
Q psy3139 419 SPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYI----GNSFPPTAAH 494 (708)
Q Consensus 419 ~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~----~~SF~tIva~ 494 (708)
+.+...|.|||++||+.||+|+++...++..++ +.+++| +||.|+++.+.+...+.+++. ...|+.++++
T Consensus 129 ~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~----~~irpG--vTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svct 202 (396)
T PLN03158 129 SDLQHSVEIKTPEQIQRMRETCRIAREVLDAAA----RAIKPG--VTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCT 202 (396)
T ss_pred cccccceeeCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHcCCccccccccCCCceeee
Confidence 345678999999999999999988877765544 566778 899999999887644443332 2468888999
Q ss_pred cCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHH
Q psy3139 495 GTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHR 573 (708)
Q Consensus 495 G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~ 573 (708)
|.|.+++|+.|+ +++|++| +|++|+|+.|.||++|++|||++|+++++++++|+.+.+++.+++.++.| |++..+
T Consensus 203 s~N~~i~Hgip~---~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkP-Gv~~~d 278 (396)
T PLN03158 203 SVNEVICHGIPD---ARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKP-GVRYRE 278 (396)
T ss_pred cccccccCCCCC---CccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCHHH
Confidence 999999999985 7899999 99999999999999999999999999999999999999999988877765 999999
Q ss_pred HHHHHHHHHHHcCCC-CCCCCceecCCCCccccCCC----------ccccCCcEEeeCCccc--cc--------------
Q psy3139 574 LEYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDFN----------STLNINFFGVVEPEYL--DC-------------- 626 (708)
Q Consensus 574 lD~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP~----------~~Le~GMV~SiEPGiY--~~-------------- 626 (708)
|+.++++.+.+.|+. +.|.+||||| +.+||.|. .+|+||||||||||+| .+
T Consensus 279 I~~~i~~~~~~~G~~~v~~~~GHGIG--~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~ 356 (396)
T PLN03158 279 VGEVINRHATMSGLSVVKSYCGHGIG--ELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTA 356 (396)
T ss_pred HHHHHHHHHHHcCCCccCCccCCccc--cccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEec
Confidence 999999999999986 5788999999 58999981 4799999999999998 21
Q ss_pred ----CeEEeeEEEEeecccccccceeeccC-CCcccccc
Q psy3139 627 ----GIKIGQVIQVVPAYRERYMTMEVRSL-FPFESRLI 660 (708)
Q Consensus 627 ----GIRIEn~VlVte~~~~~~lgfE~LT~-vP~~~~lI 660 (708)
|+|+||+|+||++ |+|.||. .|....++
T Consensus 357 dG~~~aq~E~tvlVTe~------G~EiLT~~~~~~~~~~ 389 (396)
T PLN03158 357 DGKRSAQFEHTLLVTET------GVEVLTARLPSSPDVF 389 (396)
T ss_pred CCceeeEeeeEEEEeCC------cceECCCCCCCCcccc
Confidence 4689999999999 9999995 67666644
No 22
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=2.1e-34 Score=298.37 Aligned_cols=206 Identities=13% Similarity=0.125 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCCccCHHHHHHHHHHHHhhcCC----C----CCCCCCccccccCCC-CCcc
Q psy3139 433 AKGMRNSQIKDALVWVRLV-HRIEKGIESGELWDELKVLECVDQLRGEHWS----Y----IGNSFPPTAAHGTHA-TDAE 502 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l-~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~----~----~~~SF~tIva~G~Na-Ai~H 502 (708)
++.+|+|+.....+|..++ ..|+..+.+|..+||.+++++++........ + .+.+|++|+++|+|+ +.+|
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~h 80 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCeEeECcCcccCCC
Confidence 4679999988888886554 3566677778779999999999986543321 1 267999999999999 8999
Q ss_pred cCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHH
Q psy3139 503 YRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQP 581 (708)
Q Consensus 503 y~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~ 581 (708)
+.++ ++++..+ ++++|+|+.|.+|++|+||||++| |+++|+++|+.+++++.+++.+++| |+++.+++.++++.
T Consensus 81 ~~~s---~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkp-G~~~~dv~~~a~~~ 155 (243)
T cd01091 81 SSSS---DKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKP-GAKLSDVYQKTLDY 155 (243)
T ss_pred CCCC---ccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHH
Confidence 8865 6888898 999999999999999999999998 7999999999999999998887655 99999999999999
Q ss_pred HHHcCC----CCCCCCceecCCCCccccCC-------CccccCCcEEeeCCccc-------------ccCeEEeeEEEEe
Q psy3139 582 LLALAL----DYRPQRVHSIGEFLLVQEDF-------NSTLNINFFGVVEPEYL-------------DCGIKIGQVIQVV 637 (708)
Q Consensus 582 L~~~G~----~y~HGtGHGVG~~L~VHEgP-------~~~Le~GMV~SiEPGiY-------------~~GIRIEn~VlVt 637 (708)
+.+.|. .|.|++||||| |++||.| +.+|+|||||++|||+| .+|+||||+|+||
T Consensus 156 i~~~~~~~~~~~~~~~GHgiG--le~hE~~~~l~~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt 233 (243)
T cd01091 156 IKKKKPELEPNFTKNLGFGIG--LEFRESSLIINAKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVT 233 (243)
T ss_pred HHHhChhHHHhCcCCcccccC--cccccCccccCCCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEc
Confidence 988863 47899999999 6999977 36899999999999999 2589999999999
Q ss_pred ecccccccce-eecc
Q psy3139 638 PAYRERYMTM-EVRS 651 (708)
Q Consensus 638 e~~~~~~lgf-E~LT 651 (708)
++ |. |.||
T Consensus 234 ~~------G~~~~LT 242 (243)
T cd01091 234 ED------EPAIVLT 242 (243)
T ss_pred CC------CCceecC
Confidence 99 88 8887
No 23
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.3e-33 Score=282.24 Aligned_cols=194 Identities=17% Similarity=0.253 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCcc
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVK 512 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~ 512 (708)
|+.||+|+.+...++..+. +.+++| +||.|++..+....... +..+.+|++++++|+|+..+|+.|+ +++
T Consensus 1 i~~~r~a~~i~~~~~~~~~----~~~~~G--~te~ei~~~~~~~~~~~-g~~~~~~~~~v~~g~~~~~~h~~~~---~~~ 70 (208)
T cd01092 1 IELLRKAARIADKAFEELL----EFIKPG--MTEREVAAELEYFMRKL-GAEGPSFDTIVASGPNSALPHGVPS---DRK 70 (208)
T ss_pred CHHHHHHHHHHHHHHHHHH----HHCcCC--CCHHHHHHHHHHHHHHc-CCCCCCCCcEEEECccccccCCCCC---CcC
Confidence 6899999888877765544 566788 89999999988765444 3346789999999999999999985 688
Q ss_pred ccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC--CC
Q psy3139 513 IGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL--DY 589 (708)
Q Consensus 513 l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~--~y 589 (708)
+++| ++++|+|++|.+|++|++||+++|+|+++++++|+.+++++.+++.+.+| |+++.+++..+++.+++.|+ .|
T Consensus 71 l~~gd~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~di~~~~~~~~~~~g~~~~~ 149 (208)
T cd01092 71 IEEGDLVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKP-GVTAKEVDKAARDVIEEAGYGEYF 149 (208)
T ss_pred cCCCCEEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999 99999999999999999999999999999999999999999998887765 99999999999999999998 57
Q ss_pred CCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeec
Q psy3139 590 RPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPA 639 (708)
Q Consensus 590 ~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~ 639 (708)
.|++||||| +..||.| +.+|+|||||++||++| .+|+|+||+|+||++
T Consensus 150 ~~~~Gh~iG--~~~~e~p~i~~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 206 (208)
T cd01092 150 IHRTGHGVG--LEVHEAPYISPGSDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVTED 206 (208)
T ss_pred CCCCccccC--cccCcCCCcCCCCCCCcCCCCEEEECCeEEecCCCEEEeeeEEEECCC
Confidence 999999999 5999988 36899999999999999 689999999999987
No 24
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.8e-33 Score=288.54 Aligned_cols=202 Identities=16% Similarity=0.139 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC----CCCCCCCccccccCCCCCcccCCCCC
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS----YIGNSFPPTAAHGTHATDAEYRPDAK 508 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~----~~~~SF~tIva~G~NaAi~Hy~p~~~ 508 (708)
|+.||+|..+...++...+ +.+++| +||.|++..+.+.....+. ....+|+..+.+|.|++++|+.|+
T Consensus 1 I~~lr~A~~i~~~~~~~~~----~~~~pG--~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~-- 72 (238)
T cd01086 1 IEGMREAGRIVAEVLDELA----KAIKPG--VTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPD-- 72 (238)
T ss_pred CHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCC--
Confidence 6889999877776665544 567789 8999999888764333221 123567778888999999999875
Q ss_pred CCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC
Q psy3139 509 TNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL 587 (708)
Q Consensus 509 t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~ 587 (708)
+++|++| ++++|+|+.|.+|++|+|||+++|+||++++++|+.+++++.++..+++| |+++.+++.++++.+.+.|+
T Consensus 73 -~~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~G~ 150 (238)
T cd01086 73 -DRVLKDGDIVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKP-GNRIGDIGHAIEKYAEKNGY 150 (238)
T ss_pred -CcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCc
Confidence 7899999 99999999999999999999999999999999999999999998887765 99999999999999999998
Q ss_pred C-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCcccc--------------------cCeEEeeEEEE
Q psy3139 588 D-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYLD--------------------CGIKIGQVIQV 636 (708)
Q Consensus 588 ~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY~--------------------~GIRIEn~VlV 636 (708)
. +.|.+||||| +.+||.| +.+|+|||||++||++|. +|+|+||+|+|
T Consensus 151 ~~~~~~~GHgiG--~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~V 228 (238)
T cd01086 151 SVVREFGGHGIG--RKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLI 228 (238)
T ss_pred ceecCccccCCC--CccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEE
Confidence 5 5789999999 5899988 257999999999999981 38999999999
Q ss_pred eecccccccceeeccC
Q psy3139 637 VPAYRERYMTMEVRSL 652 (708)
Q Consensus 637 te~~~~~~lgfE~LT~ 652 (708)
|++ |.|.||.
T Consensus 229 te~------G~e~Lt~ 238 (238)
T cd01086 229 TED------GPEILTL 238 (238)
T ss_pred cCC------cceeCCC
Confidence 999 9999984
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.98 E-value=4.4e-31 Score=260.53 Aligned_cols=193 Identities=19% Similarity=0.276 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCcc
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVK 512 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~ 512 (708)
|+.||+|+.+...++..++ +.+++| +||.|+++.+.+...+.+. +++|++++++|+|+.++||.|+ +++
T Consensus 1 i~~~r~a~~i~~~~~~~~~----~~~~~G--~te~ei~~~~~~~~~~~g~--~~~~~~~v~~g~~~~~~h~~~~---~~~ 69 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAA----EAIRPG--VTEAEVAAAIEQALRAAGG--YPAGPTIVGSGARTALPHYRPD---DRR 69 (207)
T ss_pred CHHHHHHHHHHHHHHHHHH----HHCcCC--CCHHHHHHHHHHHHHHcCC--CCCCCcEEEECccccCcCCCCC---CCC
Confidence 5789999888777765544 566778 8999999998875444433 6788999999999999999986 689
Q ss_pred ccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC--CC
Q psy3139 513 IGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL--DY 589 (708)
Q Consensus 513 l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~--~y 589 (708)
+++| ++++|+|++|.+|++|++||+++|+|+++++++|+.+.+++.++...++| |+++.+++..+++.+.+.|+ .+
T Consensus 70 i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~p-G~~~~ei~~~~~~~~~~~g~~~~~ 148 (207)
T cd01066 70 LQEGDLVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRP-GVTAEEVDAAAREVLEEHGLGPNF 148 (207)
T ss_pred cCCCCEEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCccccC
Confidence 9999 99999999999999999999999999999999999999999988887765 99999999999999999997 57
Q ss_pred CCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeec
Q psy3139 590 RPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPA 639 (708)
Q Consensus 590 ~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~ 639 (708)
.|++||||| +.+||.| +.+|+|||||++||++| .+|+|+||+|+||++
T Consensus 149 ~~~~Gh~iG--~~~~e~~~~~~~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~~ 205 (207)
T cd01066 149 GHRTGHGIG--LEIHEPPVLKAGDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTED 205 (207)
T ss_pred CCCCccccC--cccCCCCCcCCCCCCCcCCCCEEEECCEEEECCCcEEEeeeEEEEeCC
Confidence 999999999 6999988 36899999999999999 389999999999986
No 26
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.97 E-value=2.1e-31 Score=266.94 Aligned_cols=191 Identities=19% Similarity=0.301 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-HhhcCCCCCCCCCccccccCCCCCcccCCCCCCCcc
Q psy3139 434 KGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL-RGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVK 512 (708)
Q Consensus 434 e~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~-r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~ 512 (708)
|+||+|+++...++.+++.+ +++| +||.|+++.+... +.. .+..+.+|++++++|+|+.++||.|+ +++
T Consensus 1 e~~R~a~~i~~~~~~~~~~~----~~~G--~te~ei~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~---~~~ 70 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEA----LRPG--MTEYEIAAAIERAMLRR-HGGEEPAFPPIVGSGPNTDLPHYTPT---DRR 70 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HSTT--CBHHHHHHHHHHHHHHH-TTTTEESSESEEEECCCCGETTTBCC---SSB
T ss_pred CHHHHHHHHHHHHHHHHHHH----ccCC--CcHHHHHHHHHHHHHHH-cCCCcccCCceEecCCcceecceecc---cee
Confidence 68999999988888777655 4568 8999999999876 333 23456789999999999999999774 789
Q ss_pred ccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC--CC
Q psy3139 513 IGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL--DY 589 (708)
Q Consensus 513 l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~--~y 589 (708)
|++| ++.+|+|++|.+|++|++||+++| |+++++++|+.+++++.+++.+++| |.++.+++.++++.+.+.|+ .+
T Consensus 71 l~~gd~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~p-G~~~~~v~~~~~~~~~~~g~~~~~ 148 (207)
T PF00557_consen 71 LQEGDIVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRP-GVTGSDVYEAVREVLEEYGLEEPY 148 (207)
T ss_dssp ESTTEEEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-ST-TSBHHHHHHHHHHHHHHTTEGEEB
T ss_pred eecCCcceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhccc-ccccchhhHHHHHHHHhhccccee
Confidence 9999 999999999999999999999999 9999999999999999999887776 99999999999999999998 57
Q ss_pred CCCCceecCCCCccccC-C-------CccccCCcEEeeCCccc----ccCeEEeeEEEEee
Q psy3139 590 RPQRVHSIGEFLLVQED-F-------NSTLNINFFGVVEPEYL----DCGIKIGQVIQVVP 638 (708)
Q Consensus 590 ~HGtGHGVG~~L~VHEg-P-------~~~Le~GMV~SiEPGiY----~~GIRIEn~VlVte 638 (708)
.|+.||||| +.+||. | +.+|+|||||++||++| .+|+|+||+|+||+
T Consensus 149 ~~~~GH~iG--~~~~~~~P~i~~~~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 149 PHGLGHGIG--LEFHEPGPNIARPGDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLVTE 207 (207)
T ss_dssp TSSSEEEES--SSSSEEEEEESSTTTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEEES
T ss_pred eeccccccc--ccccccceeeecccccceecCCCceeEeeeEEccCCCcEEEEEEEEEECc
Confidence 999999999 699986 7 36899999999999998 45999999999996
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.97 E-value=7.8e-31 Score=268.68 Aligned_cols=200 Identities=12% Similarity=0.087 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhh---------cCCCCCCCCCccccccCCCCCccc
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGE---------HWSYIGNSFPPTAAHGTHATDAEY 503 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~---------~~~~~~~SF~tIva~G~NaAi~Hy 503 (708)
++.||+|+.+...++.+++ +.+++| +||.|++...+.+... ..+..+.+|+++++ .|++.+||
T Consensus 1 ~~~~r~A~~I~~~~~~~~~----~~i~pG--~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~ 72 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVI----SLCVPG--AKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHF 72 (228)
T ss_pred CHHHHHHHHHHHHHHHHHH----HhccCC--CcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecC
Confidence 3689999888777766554 556778 8999987665543222 13456789999887 48999999
Q ss_pred CCCC-CCCccccCC-eEEEEeecccCCcccceeeEEecCCCCH-----HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHH
Q psy3139 504 RPDA-KTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTP-----LQRSVYTAILKGLIALVTTQFLPGSSLHRLEY 576 (708)
Q Consensus 504 ~p~~-~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~-----eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~ 576 (708)
.|.. .++++|++| ++++|+|+.|.+|++|+||||++|+|++ +++++|..+++++.+++.+++| |+++.++|.
T Consensus 73 ~p~~~~~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kp-G~~~~dv~~ 151 (228)
T cd01089 73 SPLKSDATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRP-GNQNSDITE 151 (228)
T ss_pred CCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHH
Confidence 9864 368899999 9999999999999999999999999885 8999999999999998887765 999999999
Q ss_pred HHHHHHHHcCC-----CCCCCCceecCCCCccccCC---CccccCCcEEeeCCccc---ccCeEEeeEEEEeeccccccc
Q psy3139 577 LLEQPLLALAL-----DYRPQRVHSIGEFLLVQEDF---NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYRERYM 645 (708)
Q Consensus 577 ~AR~~L~~~G~-----~y~HGtGHGVG~~L~VHEgP---~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~~~~l 645 (708)
++++.+.+.|+ .+.|++|| +++.|+++ ..+|++||||++||++| .+|+|+||+|+||++
T Consensus 152 a~~~~~~~~G~~~~~~~~~h~~g~----~~~~~~~~~~~~~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~vt~~------ 221 (228)
T cd01089 152 AIQKVIVDYGCTPVEGVLSHQLKR----VVSSGEGKAKLVECVKHGLLFPYPVLYEKEGEVVAQFKLTVLLTPN------ 221 (228)
T ss_pred HHHHHHHHcCCEEecCccccCcCc----eEecCCCCccchhhccCCcccccceeEccCCCeEEEEEEEEEEcCC------
Confidence 99999999995 23555555 44577766 46799999999999999 688999999999999
Q ss_pred ceeecc
Q psy3139 646 TMEVRS 651 (708)
Q Consensus 646 gfE~LT 651 (708)
|.|.||
T Consensus 222 G~e~lt 227 (228)
T cd01089 222 GVTVLT 227 (228)
T ss_pred CCeeCC
Confidence 999998
No 28
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.93 E-value=4e-25 Score=245.76 Aligned_cols=188 Identities=13% Similarity=0.155 Sum_probs=156.7
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-Hh---hcCCCCCCCCCccccccCCCC
Q psy3139 424 LKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL-RG---EHWSYIGNSFPPTAAHGTHAT 499 (708)
Q Consensus 424 lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~-r~---~~~~~~~~SF~tIva~G~NaA 499 (708)
-+..+|++||+.||+|+.+...++ .++...+++| +||.|+++.++.. |. ..+...+.+||+++ +.|.+
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl----~~~~~~IkpG--~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~ 220 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVR----RYAQSVIKPG--VKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHC 220 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHH----HHHHHHhhCC--CCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCcc
Confidence 334479999999999987766554 4455567789 8999999988764 22 22222468999965 57899
Q ss_pred CcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHH
Q psy3139 500 DAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLL 578 (708)
Q Consensus 500 i~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~A 578 (708)
.+||.|...++++|+.| +|.||+|++|.||.+|+||||++| +++++++.+|.+|+.+++.++.| |++..+|+.++
T Consensus 221 aaH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kp-Gv~~~dI~~AI 296 (470)
T PTZ00053 221 AAHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGI-DVRLSDIGAAI 296 (470)
T ss_pred ccCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHH
Confidence 99999976557899999 999999999999999999999998 68899999999999998887765 99999999999
Q ss_pred HHHHHHcCCC----------CCCCCceecCCCCccccCC---------CccccCCcEEeeCCccc
Q psy3139 579 EQPLLALALD----------YRPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL 624 (708)
Q Consensus 579 R~~L~~~G~~----------y~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY 624 (708)
++.+.++|+. ..|.+|||||. ..+||+| ..+|++||||+|||..-
T Consensus 297 qevies~G~e~~Gk~f~~k~I~nltGHgIG~-y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~s 360 (470)
T PTZ00053 297 QEVIESYEVEIKGKTYPIKSIRNLNGHSIGP-YIIHGGKSVPIVKGGENTRMEEGELFAIETFAS 360 (470)
T ss_pred HHHHHHcCCcccCcccccccccCCcccCCCC-ccccCCCcCCeeCCCCCCEecCCCEEEEcceee
Confidence 9999999963 27999999995 2799965 25899999999999876
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.93 E-value=5.1e-25 Score=234.02 Aligned_cols=178 Identities=16% Similarity=0.141 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCc
Q psy3139 432 EAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNV 511 (708)
Q Consensus 432 EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~ 511 (708)
+|+.||+|+.+...++..++ +.+++| +||.|+++.++....+.+ .+++|++++++|.+ .+||.|...+++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~----~~i~pG--~se~ei~~~~~~~i~~~g--~~~afp~~vs~n~~--~~H~~p~~~d~~ 70 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAA----KLIKPG--AKLLDVAEFVENRIRELG--AKPAFPCNISINEV--AAHYTPSPGDER 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHH----HhccCC--CcHHHHHHHHHHHHHHcC--CccCCCCEEeeCCC--ccCCCCCCCCCc
Confidence 58999999888776665544 567788 899999999987655443 25899998877554 579999765678
Q ss_pred cccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC-CC
Q psy3139 512 KIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL-DY 589 (708)
Q Consensus 512 ~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~-~y 589 (708)
+|++| ++.+|+|++|.||.+|++||+++| ++++++|+.+.+++.++++++.| |++..+++.++++.+.+.|+ .+
T Consensus 71 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikp-G~~~~dv~~~i~~vi~~~G~~~~ 146 (291)
T PRK08671 71 VFPEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRP-GVSVGEIGRVIEETIRSYGFKPI 146 (291)
T ss_pred ccCCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCccc
Confidence 99999 999999999999999999999999 47889999999999888877655 99999999999999999998 46
Q ss_pred CCCCceecCCCCccccCC---------CccccCCcEEeeCCccc
Q psy3139 590 RPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL 624 (708)
Q Consensus 590 ~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY 624 (708)
.|.+|||||.+ .+||+| +.+|+|||||++||++.
T Consensus 147 ~~~~GHgiG~~-~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t 189 (291)
T PRK08671 147 RNLTGHGLERY-ELHAGPSIPNYDEGGGVKLEEGDVYAIEPFAT 189 (291)
T ss_pred CCCcccCcCCC-cccCCCccCccCCCCCceeCCCCEEEEcceEE
Confidence 79999999963 799987 25799999999999876
No 30
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.92 E-value=2.3e-24 Score=229.44 Aligned_cols=179 Identities=14% Similarity=0.128 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCC
Q psy3139 431 AEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTN 510 (708)
Q Consensus 431 ~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~ 510 (708)
+||+.||+|+.+...++..++ +.+++| ++|.|+++.++....+.+. .++|+++++. |+..+||.|...++
T Consensus 3 ~~i~~~r~A~~I~~~~~~~~~----~~i~~G--~se~el~~~~e~~~~~~g~--~~aFp~~vs~--n~~~~H~~p~~~d~ 72 (295)
T TIGR00501 3 ERAEKWIEAGKIHSKVRREAA----DRIVPG--VKLLEVAEFVENRIRELGA--EPAFPCNISI--NECAAHFTPKAGDK 72 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHCcCC--CCHHHHHHHHHHHHHHcCC--CCCCCcceec--CCEeeCCCCCCCcC
Confidence 689999999988877766554 456678 8999999999876544432 3799998764 67778999976567
Q ss_pred ccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC-C
Q psy3139 511 VKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL-D 588 (708)
Q Consensus 511 ~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~-~ 588 (708)
++|++| ++++|+|++|.||.+|+|||+++|++ ++++|+++.+|+.++++++.| |++..+++.++++.+.+.|+ .
T Consensus 73 ~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~~---~~~l~~a~~~A~~aai~~~kP-Gv~~~dV~~ai~~vi~~~G~~~ 148 (295)
T TIGR00501 73 TVFKDGDVVKLDLGAHVDGYIADTAITVDLGDQ---YDNLVKAAKDALYTAIKEIRA-GVRVGEIGKAIQEVIESYGVKP 148 (295)
T ss_pred ccCCCCCEEEEEEeEEECCEEEEEEEEEEeCcH---HHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHcCCee
Confidence 889999 99999999999999999999999963 688999999999888877655 99999999999999999998 4
Q ss_pred CCCCCceecCCCCccccCC---------CccccCCcEEeeCCccc
Q psy3139 589 YRPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL 624 (708)
Q Consensus 589 y~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY 624 (708)
+.|.+|||||. +.+|++| ..+|+|||||++||++-
T Consensus 149 i~~~~GHgig~-~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~ 192 (295)
T TIGR00501 149 ISNLTGHSMAP-YRLHGGKSIPNVKERDTTKLEEGDVVAIEPFAT 192 (295)
T ss_pred ecCCCCcceec-ccccCCCccCeecCCCCCEeCCCCEEEEceeEE
Confidence 78999999996 4689874 25799999999999754
No 31
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=3.1e-23 Score=214.65 Aligned_cols=209 Identities=17% Similarity=0.204 Sum_probs=166.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhc------CCCCCCCCCccccccCCCCC
Q psy3139 427 YKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEH------WSYIGNSFPPTAAHGTHATD 500 (708)
Q Consensus 427 iKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~------~~~~~~SF~tIva~G~NaAi 500 (708)
+|++.||+.||+|+++.+.+ +..+.+.+++| +|-.|+....+++..+. .+|.+ |+.-++..-|.-+
T Consensus 5 ikt~~eiek~r~Ag~i~a~~----l~~~~~~v~pG--vtt~Eld~~~~~~i~~~ga~pa~~gy~g--~~~~~ciSvNe~v 76 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKA----LKEVASLVKPG--VTTLELDEIAEEFIREKGAYPAFLGYKG--FPFPTCISVNEVV 76 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHH----HHHHHHHcCCC--CCHHHHHHHHHHHHHHcCceehhccCcC--CCcceEeehhhee
Confidence 89999999999998766554 44556678899 78888888887764432 23444 5544556679999
Q ss_pred cccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCH-HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHH
Q psy3139 501 AEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTP-LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLL 578 (708)
Q Consensus 501 ~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~-eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~A 578 (708)
+||.|+ .+++|++| ++-||+|+.+.||++|..+||.+|+.++ ..+++-+.+.++..+.+++++| |.+-.+|-.+.
T Consensus 77 ~HgiP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkp-G~~l~~Ig~aI 153 (255)
T COG0024 77 AHGIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKP-GARLGDIGRAI 153 (255)
T ss_pred eecCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHH
Confidence 999998 67899999 9999999999999999999999997665 6666888888998888876665 88877776666
Q ss_pred HHHHHHcCCC-CCCCCceecCCCCccccCCC----------ccccCCcEEeeCCccc-------c------------cC-
Q psy3139 579 EQPLLALALD-YRPQRVHSIGEFLLVQEDFN----------STLNINFFGVVEPEYL-------D------------CG- 627 (708)
Q Consensus 579 R~~L~~~G~~-y~HGtGHGVG~~L~VHEgP~----------~~Le~GMV~SiEPGiY-------~------------~G- 627 (708)
.+...+.|+. -+.-+|||||. ..||+|. .+|+|||||+|||.+- . .+
T Consensus 154 q~~~~~~G~~vVr~~~GHgig~--~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~ 231 (255)
T COG0024 154 QEYAESRGFSVVRNLTGHGIGR--ELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSL 231 (255)
T ss_pred HHHHHHcCCEEeecccCCccCc--ccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCE
Confidence 6666678873 23449999996 8999991 4899999999999886 0 11
Q ss_pred -eEEeeEEEEeecccccccceeeccCCC
Q psy3139 628 -IKIGQVIQVVPAYRERYMTMEVRSLFP 654 (708)
Q Consensus 628 -IRIEn~VlVte~~~~~~lgfE~LT~vP 654 (708)
-..|.+|+||++ |+|.||..|
T Consensus 232 ~aq~EHTv~Vt~~------g~eilT~~~ 253 (255)
T COG0024 232 SAQFEHTVIVTED------GCEILTLRP 253 (255)
T ss_pred EeEEEEEEEEeCC------CcEEeeCCC
Confidence 378999999999 999999765
No 32
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.91 E-value=1.1e-23 Score=223.71 Aligned_cols=183 Identities=15% Similarity=0.139 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCcc
Q psy3139 433 AKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVK 512 (708)
Q Consensus 433 Ie~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~ 512 (708)
++.||+|+.+...++.+++ +.+++| +||.|+++.+++...+.+. +++|++.+ +.|...+||.|...++++
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~----~~i~pG--~te~ei~~~~~~~i~~~G~--~~afp~~i--s~n~~~~H~~p~~~d~~~ 70 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQ----SLIKPG--MTLLEIAEFVENRIRELGA--GPAFPVNL--SINECAAHYTPNAGDDTV 70 (291)
T ss_pred CHHHHHHHHHHHHHHHHHH----HHccCC--CcHHHHHHHHHHHHHHcCC--CCCCCcee--ccCCEeeCCCCCCCCCcc
Confidence 3678999887777766554 556778 8999999999876554442 58898864 467788999997666789
Q ss_pred ccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-CC
Q psy3139 513 IGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-YR 590 (708)
Q Consensus 513 l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-y~ 590 (708)
|++| ++.+|.|++|.||.+|++||+++|+ +++++|+.+++++.++++++.| |++..+++.++++.+.+.|+. +.
T Consensus 71 l~~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikP-G~~~~dV~~ai~~~i~~~G~~~~~ 146 (291)
T cd01088 71 LKEGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGP-DVRLGEIGEAIEEVIESYGFKPIR 146 (291)
T ss_pred cCCCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHcCCEEee
Confidence 9999 9999999999999999999999996 7788999999999998887765 999999999999999999984 68
Q ss_pred CCCceecCCCCccccCC---------CccccCCcEEeeCCccc--ccCeEE
Q psy3139 591 PQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL--DCGIKI 630 (708)
Q Consensus 591 HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY--~~GIRI 630 (708)
|.+|||||. +.+|++| ..+|+|||||++||++- .+.++.
T Consensus 147 ~~~GHgig~-~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~ 196 (291)
T cd01088 147 NLTGHSIER-YRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHD 196 (291)
T ss_pred cCCccCccC-ccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeec
Confidence 999999996 4789885 25799999999999765 333543
No 33
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.91 E-value=4e-23 Score=227.31 Aligned_cols=197 Identities=13% Similarity=0.084 Sum_probs=162.2
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhh---------cCCCCCCCCCcccccc
Q psy3139 425 KAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGE---------HWSYIGNSFPPTAAHG 495 (708)
Q Consensus 425 RaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~---------~~~~~~~SF~tIva~G 495 (708)
-.+|||.||+.||+|+.+...++..+ .+.+++| +||.|+++..+.+..+ ..++.+.+|+++++
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~----~~~ikpG--~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS-- 82 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSV----VEACSPG--AKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS-- 82 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHH----HHhCCCC--CCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--
Confidence 47999999999999988777665544 4567788 8999998876654332 12356789999876
Q ss_pred CCCCCcccCCCCC-CCccccCC-eEEEEeecccCCcccceeeEEecCC-----CCHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy3139 496 THATDAEYRPDAK-TNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGI-----PTPLQRSVYTAILKGLIALVTTQFLPG 568 (708)
Q Consensus 496 ~NaAi~Hy~p~~~-t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~-----pt~eqr~~yt~VLka~ial~~a~fp~G 568 (708)
.|..++||.|... ++++|++| +|.||+|++|.||++|++|||++|+ +++++++++.++.+|+.+++.++. ||
T Consensus 83 vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vk-PG 161 (389)
T TIGR00495 83 VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVK-PG 161 (389)
T ss_pred cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 6899999999643 35889999 9999999999999999999999995 578899999999999988888775 49
Q ss_pred CchHHHHHHHHHHHHHcCCC-CCCCCceecCCCCcccc-CC----C-----------ccccCCcEEeeCCccc--ccCeE
Q psy3139 569 SSLHRLEYLLEQPLLALALD-YRPQRVHSIGEFLLVQE-DF----N-----------STLNINFFGVVEPEYL--DCGIK 629 (708)
Q Consensus 569 ~~g~~lD~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHE-gP----~-----------~~Le~GMV~SiEPGiY--~~GIR 629 (708)
++..+++.++++.+.++|+. ..+-+|||||. .+|| +| + ..|++|||++|||++- .+-++
T Consensus 162 ~~~~dI~~ai~~v~~~~G~~~v~~~~gH~igr--~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~ 239 (389)
T TIGR00495 162 NTNTQVTEAINKVAHSYGCTPVEGMLSHQLKQ--HVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAK 239 (389)
T ss_pred CcHHHHHHHHHHHHHHcCCeecCCceeecccc--eeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEE
Confidence 99999999999999999984 56779999997 6777 54 1 2599999999999998 44477
Q ss_pred Eee
Q psy3139 630 IGQ 632 (708)
Q Consensus 630 IEn 632 (708)
..+
T Consensus 240 ~~~ 242 (389)
T TIGR00495 240 DAD 242 (389)
T ss_pred ECC
Confidence 665
No 34
>KOG2738|consensus
Probab=99.83 E-value=2e-19 Score=185.68 Aligned_cols=210 Identities=15% Similarity=0.145 Sum_probs=169.0
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCC----CCCCccccccCCCCCc
Q psy3139 426 AYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIG----NSFPPTAAHGTHATDA 501 (708)
Q Consensus 426 aiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~----~SF~tIva~G~NaAi~ 501 (708)
-|.+++||++||.|+++..+. +......+++| +|--|+...+.+.--+.+.|-. -.||--+++.-|..|+
T Consensus 115 ~i~~~e~ie~mR~ac~Larev----Ld~Aa~~v~Pg--vTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviC 188 (369)
T KOG2738|consen 115 KILDPEGIEGMRKACRLAREV----LDYAATLVRPG--VTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVIC 188 (369)
T ss_pred eccCHHHHHHHHHHHHHHHHH----HHHHhhhcCCC--ccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheee
Confidence 467999999999999886544 44455677889 5655555555544333344432 3688889999999999
Q ss_pred ccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Q psy3139 502 EYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQ 580 (708)
Q Consensus 502 Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~ 580 (708)
|+.|+ .|+|++| ++-||.-..|.||+.|+.+||.+|+.+++.|++-+...++...++..+. ||+.-.+|-.+..+
T Consensus 189 HGIPD---~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~k-pGv~freiG~iI~k 264 (369)
T KOG2738|consen 189 HGIPD---SRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVK-PGVSFREIGNIIQK 264 (369)
T ss_pred cCCCC---cCcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHH
Confidence 99997 6999999 9999999999999999999999999999999998888888767665554 59999999988888
Q ss_pred HHHHcCCC-CCCCCceecCCCCccccCCC----------ccccCCcEEeeCCccc-----------c------cC---eE
Q psy3139 581 PLLALALD-YRPQRVHSIGEFLLVQEDFN----------STLNINFFGVVEPEYL-----------D------CG---IK 629 (708)
Q Consensus 581 ~L~~~G~~-y~HGtGHGVG~~L~VHEgP~----------~~Le~GMV~SiEPGiY-----------~------~G---IR 629 (708)
.-.+.|+. .+.-.|||||. -.|-.|+ ..+++||+|||||++- . -| --
T Consensus 265 ha~~~g~sVVr~ycGHGig~--~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQ 342 (369)
T KOG2738|consen 265 HATKNGYSVVRSYCGHGIGR--VFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQ 342 (369)
T ss_pred HhhhcCceeehhhhcccccc--ccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecc
Confidence 88888986 34559999996 4688882 4799999999999886 1 13 36
Q ss_pred EeeEEEEeecccccccceeeccCC
Q psy3139 630 IGQVIQVVPAYRERYMTMEVRSLF 653 (708)
Q Consensus 630 IEn~VlVte~~~~~~lgfE~LT~v 653 (708)
.|.++|||++ |.|.||..
T Consensus 343 FEhTlLVT~t------G~EILT~r 360 (369)
T KOG2738|consen 343 FEHTLLVTET------GCEILTKR 360 (369)
T ss_pred eeeEEEEecc------cceehhcc
Confidence 8999999999 99999965
No 35
>KOG1189|consensus
Probab=99.58 E-value=2.1e-13 Score=154.57 Aligned_cols=237 Identities=13% Similarity=0.133 Sum_probs=175.9
Q ss_pred CeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCccCHHHHHHHHHHHHhhc-------CCC
Q psy3139 412 LKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVH-RIEKGIESGELWDELKVLECVDQLRGEH-------WSY 483 (708)
Q Consensus 412 ~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~-~l~~~i~~G~~~TE~eva~~l~~~r~~~-------~~~ 483 (708)
.+.++.+-.+..+-++|++.||+.+|.|+....+.|.+++. .+...+..|..+|---+...++...... +.-
T Consensus 122 fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~ 201 (960)
T KOG1189|consen 122 FNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDL 201 (960)
T ss_pred CceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccc
Confidence 46777777799999999999999999998777766665542 3333444444355444555554433211 112
Q ss_pred CCCCCCccccccCCCCCcccCCCCC-CCccccCCeEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHH
Q psy3139 484 IGNSFPPTAAHGTHATDAEYRPDAK-TNVKIGDDILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVT 562 (708)
Q Consensus 484 ~~~SF~tIva~G~NaAi~Hy~p~~~-t~~~l~~gllLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~ 562 (708)
....|++|+-+|.+=.+ .|+.. ++..| +++++-+|++|..||+.++||+.+- |+.++.+.|+..+.+|.++..
T Consensus 202 ~d~cY~PIiqSGg~ydl---k~sa~s~~~~L--~~I~cs~G~RynsYCSNv~RT~Lid-pssemq~nY~fLl~aqe~il~ 275 (960)
T KOG1189|consen 202 LDMCYPPIIQSGGKYDL---KPSAVSDDNHL--HVILCSLGIRYNSYCSNVSRTYLID-PSSEMQENYEFLLAAQEEILK 275 (960)
T ss_pred cccccChhhhcCCcccc---ccccccccccc--ceEEeeccchhhhhhccccceeeec-chHHHHHHHHHHHHHHHHHHH
Confidence 34578899988876332 22222 23444 3899999999999999999999885 789999999999999999998
Q ss_pred hcCCCCCchHHHHHHHHHHHHHcCCC----CCCCCceecCCCCccccCC-------CccccCCcEEeeCCccc-------
Q psy3139 563 TQFLPGSSLHRLEYLLEQPLLALALD----YRPQRVHSIGEFLLVQEDF-------NSTLNINFFGVVEPEYL------- 624 (708)
Q Consensus 563 a~fp~G~~g~~lD~~AR~~L~~~G~~----y~HGtGHGVG~~L~VHEgP-------~~~Le~GMV~SiEPGiY------- 624 (708)
+.+| |+.-.++...+-.++.+.+.. |.-..|-||| |...|.- +.+|++||||.+--|+-
T Consensus 276 ~lrp-G~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iG--lEFREssl~inaKnd~~lk~gmvFni~lGf~nl~n~~~ 352 (960)
T KOG1189|consen 276 LLRP-GTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIG--LEFRESSLVINAKNDRVLKKGMVFNISLGFSNLTNPES 352 (960)
T ss_pred hhcC-CCchhHHHHHHHHHHHhcCcchhhhhhhhcccccc--eeeecccccccccchhhhccCcEEEEeeccccccCccc
Confidence 7665 999999999999999988763 5556899999 6788865 47899999999988875
Q ss_pred --ccCeEEeeEEEEeecccccccce-eeccCCCccccccccc
Q psy3139 625 --DCGIKIGQVIQVVPAYRERYMTM-EVRSLFPFESRLIDTS 663 (708)
Q Consensus 625 --~~GIRIEn~VlVte~~~~~~lgf-E~LT~vP~~~~lId~~ 663 (708)
.|.+-|.|||+|+++ +- +.||.++....-+...
T Consensus 353 ~~~yaL~l~DTvlv~e~------~p~~vLT~~~K~~~dv~~~ 388 (960)
T KOG1189|consen 353 KNSYALLLSDTVLVGED------PPAEVLTDSAKAVKDVSYF 388 (960)
T ss_pred ccchhhhccceeeecCC------Ccchhhcccchhhccccee
Confidence 356779999999998 43 7788777665554443
No 36
>PRK09795 aminopeptidase; Provisional
Probab=99.53 E-value=2.7e-14 Score=156.13 Aligned_cols=109 Identities=11% Similarity=0.203 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCccEEEecc
Q psy3139 42 QRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTTAVLWTEA 121 (708)
Q Consensus 42 ~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~a~l~td~ 121 (708)
+||++||+.|+++++||+||++.+ +++|||||+|++|.++||+++++||||+
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~----------------------------n~~YLTGf~g~~g~llIt~~~~~l~td~ 53 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQ----------------------------NKQPHLGISTGSGYVVISRESAHILVDS 53 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCcc----------------------------ccccccCccCCCeEEEEECCCCEEEcCc
Confidence 699999999999999999998764 4789999999999999999999999999
Q ss_pred ccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhccC--C
Q psy3139 122 KYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAKY--T 199 (708)
Q Consensus 122 rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~ 199 (708)
||++||++++++.++.+.. ..+++.+||++.++. .
T Consensus 54 ry~~qa~~~~~~~~v~~~~-------------------------------------------~~~~~~~~L~~~L~~~~~ 90 (361)
T PRK09795 54 RYYADVEARAQGYQLHLLD-------------------------------------------ATNTLTTIVNQIIADEQL 90 (361)
T ss_pred chHHHHHhhCCCceEEEec-------------------------------------------CCccHHHHHHHHHHhcCC
Confidence 9999999998864433321 123567888887763 3
Q ss_pred CeEEECCCcccHHHHHHHHHHH
Q psy3139 200 DKIASDPLKWEFSEWLNLDNYL 221 (708)
Q Consensus 200 ~~~~~d~~~~~~~~~~~l~~~~ 221 (708)
++||+|+..+++..++.|.+.+
T Consensus 91 ~~Ig~e~~~~s~~~~~~L~~~l 112 (361)
T PRK09795 91 QTLGFEGQQVSWETAHRWQSEL 112 (361)
T ss_pred cEEEEecCcccHHHHHHHHHhc
Confidence 6899999999999999998654
No 37
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.42 E-value=6.2e-13 Score=122.92 Aligned_cols=125 Identities=19% Similarity=0.349 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccc---cCCceEEE-EeCCccEEE
Q psy3139 43 RLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGF---TGESGQGV-VTQTTAVLW 118 (708)
Q Consensus 43 rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgf---tgs~g~~~-vt~~~a~l~ 118 (708)
|+++||+.|++.|+|+++|++. .+++|+||| +|+.++++ |+++.++||
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~----------------------------~ni~YltG~~~~~~~~~~~l~i~~~~~~l~ 52 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSP----------------------------ENIRYLTGFRWQPGERPVLLVITADGAVLF 52 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESH----------------------------HHHHHHHS--ST-TSSEEEEEEESSSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcCh----------------------------hhceEecCCCcCCCcceEEEEecccCcEEE
Confidence 8999999999999999999865 269999999 99999999 899999999
Q ss_pred ec-cccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhcc
Q psy3139 119 TE-AKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAK 197 (708)
Q Consensus 119 td-~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 197 (708)
+| ++|..+++.+.... .+...+ . ..+++.+||+++..
T Consensus 53 ~~~~~~~~~~~~~~~~~--~v~~~~--------------------------------------~--~~~~~~~~l~~~~~ 90 (132)
T PF01321_consen 53 VPKGEYERAAEESAPDD--EVVEYE--------------------------------------D--PYEAIAEALKKLGP 90 (132)
T ss_dssp EEGGGHHHHHHHHTTSS--EEEEES--------------------------------------T--HHHHHHHHHHHHTT
T ss_pred eccccHHHHHHhhcCCc--eEEEEe--------------------------------------c--ccchHHHHHHHhCC
Confidence 99 99999888883323 333220 0 02478899999877
Q ss_pred CCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 198 YTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 198 ~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
..++||+|+..+++..++.|++.+. +.++++. .++++.+|
T Consensus 91 ~~~~igve~~~~~~~~~~~l~~~~~--~~~~v~~-~~~i~~~R 130 (132)
T PF01321_consen 91 EGKRIGVEPDSLSAAEYQRLQEALP--GAEFVDA-SPLIEELR 130 (132)
T ss_dssp TTSEEEEETTTSBHHHHHHHHHHST--TSEEEEE-HHHHHHHH
T ss_pred CCCEEEEcCCcChHHHHHHHHHhCC--CCEEEEc-HHHHHHcC
Confidence 7899999999999999999999884 5688887 57888875
No 38
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.25 E-value=3.4e-11 Score=111.30 Aligned_cols=126 Identities=17% Similarity=0.330 Sum_probs=92.0
Q ss_pred HHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEE-EEEeCCceEEEecCCCCcHHHHhhcCCcEEEeCc
Q psy3139 266 KVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAY-FVISTSLCVLYLPKNKITPVLRNYLGDIVIKPYD 344 (708)
Q Consensus 266 Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~ay-lvv~~d~~~Lfvd~~kl~~~v~~~l~~v~v~~Y~ 344 (708)
|++++|+.|+++|+|++++++++|+.||||++.. |....+ ++++.++.++|++................+..|+
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~~~-----~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~~~~~v~~~~ 75 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFRWQ-----PGERPVLLVITADGAVLFVPKGEYERAAEESAPDDEVVEYE 75 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS--ST------TSSEEEEEEESSSEEEEEEGGGHHHHHHHHTTSSEEEEES
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCCcC-----CCcceEEEEecccCcEEEeccccHHHHHHhhcCCceEEEEe
Confidence 7999999999999999999999999999999722 222233 4488888889998544333233332345666666
Q ss_pred c----HhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCCc
Q psy3139 345 L----VWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPS 419 (708)
Q Consensus 345 ~----~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~ 419 (708)
+ +.+.|++.....++|++|++ .++..++.+++ .+|+.++++.++
T Consensus 76 ~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~-------------------------------~~~~~~~v~~~~ 124 (132)
T PF01321_consen 76 DPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQE-------------------------------ALPGAEFVDASP 124 (132)
T ss_dssp THHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHH-------------------------------HSTTSEEEEEHH
T ss_pred cccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHH-------------------------------hCCCCEEEEcHH
Confidence 5 44566666544589999998 79999988874 278889999999
Q ss_pred hhHHHHhc
Q psy3139 420 PVKDLKAY 427 (708)
Q Consensus 420 pI~~lRai 427 (708)
++..+|+|
T Consensus 125 ~i~~~R~I 132 (132)
T PF01321_consen 125 LIEELRMI 132 (132)
T ss_dssp HHHHHHTS
T ss_pred HHHHcCcC
Confidence 99999986
No 39
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=98.79 E-value=6.5e-08 Score=108.74 Aligned_cols=206 Identities=12% Similarity=0.103 Sum_probs=136.4
Q ss_pred CeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHH------HHh-hcC---
Q psy3139 412 LKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQ------LRG-EHW--- 481 (708)
Q Consensus 412 ~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~------~r~-~~~--- 481 (708)
.+++|.+.-+..|-++|+..||+.+|.+.....+-|.-|...|...+..+..+|--.+...++. +.. ...
T Consensus 155 fN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~ 234 (1001)
T COG5406 155 FNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLG 234 (1001)
T ss_pred cchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcccc
Confidence 3677777778999999999999999998655544443222223222222211322223333322 111 111
Q ss_pred CC----CCCCCCccccccCCCCCcccCCCCC-CCccccCCeEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHH
Q psy3139 482 SY----IGNSFPPTAAHGTHATDAEYRPDAK-TNVKIGDDILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKG 556 (708)
Q Consensus 482 ~~----~~~SF~tIva~G~NaAi~Hy~p~~~-t~~~l~~gllLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka 556 (708)
.+ ..-.+.+|+-+|.. ..-+|+.- .++.+..+++++-+|.+|.+||+.++||+.+. |+.||.+-|+-++..
T Consensus 235 ~~~~d~lew~ytpiiqsg~~---~Dl~psa~s~~~~l~gd~vl~s~GiRYn~YCSn~~RT~l~d-p~~e~~~Ny~fl~~l 310 (1001)
T COG5406 235 DIDLDQLEWCYTPIIQSGGS---IDLTPSAFSFPMELTGDVVLLSIGIRYNGYCSNMSRTILTD-PDSEQQKNYEFLYML 310 (1001)
T ss_pred ccchhhhhhhcchhhccCce---eecccccccCchhhcCceEEEEeeeeeccccccccceEEeC-CchHhhhhHHHHHHH
Confidence 11 12245678877653 23344432 23445444999999999999999999999885 678888889999998
Q ss_pred HHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC----CCCCCceecCCCCccccC--C-----CccccCCcEEeeCCccc
Q psy3139 557 LIALVTTQFLPGSSLHRLEYLLEQPLLALALD----YRPQRVHSIGEFLLVQED--F-----NSTLNINFFGVVEPEYL 624 (708)
Q Consensus 557 ~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~----y~HGtGHGVG~~L~VHEg--P-----~~~Le~GMV~SiEPGiY 624 (708)
|..+...++ ||+....+..-|..++.+.|.+ |..-.|-+|| +...+. | ..+|+.||+|-+--|+-
T Consensus 311 Qk~i~~~~r-pG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~ig--iefR~s~~~~nvkn~r~lq~g~~fnis~gf~ 386 (1001)
T COG5406 311 QKYILGLVR-PGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIG--IEFRSSQKPFNVKNGRVLQAGCIFNISLGFG 386 (1001)
T ss_pred HHHHHhhcC-CCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcc--ccccccccceeccCCceeccccEEEEeeccc
Confidence 888877554 5998889999999999988875 4455777887 344442 2 37899999999987764
No 40
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=98.25 E-value=4.6e-06 Score=92.76 Aligned_cols=140 Identities=13% Similarity=0.186 Sum_probs=87.5
Q ss_pred cCCcCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCc----eEEEE
Q psy3139 35 HVTSDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGES----GQGVV 110 (708)
Q Consensus 35 ~~~~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~----g~~~v 110 (708)
.+...+++||.+||+.|+++++|++||.+.. +++|+|||++.+ ..+||
T Consensus 6 f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~----------------------------ni~YltG~~~~~~~~~~~l~v 57 (391)
T TIGR02993 6 FTRAEYQARLDKTRAAMEARGIDLLIVTDPS----------------------------NMAWLTGYDGWSFYVHQCVLL 57 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEEcCcc----------------------------cceeeccCCCCceEEEEEEEE
Confidence 3445678999999999999999999997652 599999999865 34566
Q ss_pred eCC-ccEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHH
Q psy3139 111 TQT-TAVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMN 189 (708)
Q Consensus 111 t~~-~a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (708)
+.+ ..+|+++..+..+|+.+.....-.+... .+..+. . ..++..
T Consensus 58 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~--~--~~~~~~ 102 (391)
T TIGR02993 58 PPEGEPIWYGRGQDANGAKRTAFMDHDNIVGY-------------------------------PDHYVQ--S--TERHPM 102 (391)
T ss_pred cCCCceEEEehhhhhhhHhheeeccccceeec-------------------------------cccccc--C--CCCCHH
Confidence 755 4566665554455544321000001000 000000 0 012344
Q ss_pred HHHHHhccC----CCeEEECCCc--ccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 190 QWIATHAKY----TDKIASDPLK--WEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 190 ~~l~~~~~~----~~~~~~d~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
+++++.++. ..+||+|... +++..|..|.+.|. +++++.. ..+++.++
T Consensus 103 ~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~--~~~~~d~-~~~~~~lR 156 (391)
T TIGR02993 103 DYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLP--NARFVDA-TALVNWQR 156 (391)
T ss_pred HHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCC--CCEEEeh-HHHHHHHH
Confidence 555544432 3479999875 78999999988874 5678776 57788875
No 41
>KOG2775|consensus
Probab=98.05 E-value=6e-05 Score=79.45 Aligned_cols=174 Identities=16% Similarity=0.244 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-H---hhcCCCCCCCCCccccccCCCCCcccCCCC
Q psy3139 432 EAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL-R---GEHWSYIGNSFPPTAAHGTHATDAEYRPDA 507 (708)
Q Consensus 432 EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~-r---~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~ 507 (708)
...-+|+| +.+.-+.-.++...+++| ||-+|+.+.|+.. | .+++.-.|..|||=++- |.-..||.|+.
T Consensus 84 i~~d~rra----AE~HRqvR~yv~s~ikPG--mtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~Sl--N~cAAHyTpNa 155 (397)
T KOG2775|consen 84 IYQDLRRA----AEAHRQVRKYVQSIIKPG--MTMIEICETIENTTRKLILENGLNAGIGFPTGCSL--NHCAAHYTPNA 155 (397)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHhccCc--ccHHHHHHHHHHHHHHHHHhccccccccCCCcccc--cchhhhcCCCC
Confidence 34445555 355555566677778889 8999999999863 4 34555568899986554 55557999998
Q ss_pred CCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCC--chHHHHHHHHHHHH
Q psy3139 508 KTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTT-QFLPGS--SLHRLEYLLEQPLL 583 (708)
Q Consensus 508 ~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a-~fp~G~--~g~~lD~~AR~~L~ 583 (708)
....+|+-+ +.-||+|.+-.|---|..-|++|-+- |+-.|.|...+-.. +...|+ .-.++-.+..+++.
T Consensus 156 Gd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F~p~-------~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVme 228 (397)
T KOG2775|consen 156 GDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAFNPK-------YDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVME 228 (397)
T ss_pred CCceeeeecceEEEeccccccCeEeeeeeEEeeCcc-------ccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhh
Confidence 877899999 99999999976668999999999753 33334333222222 112343 33455555566555
Q ss_pred HcCC-----CC-----CCCCceecCCCCccccCC---------CccccCCcEEeeCC
Q psy3139 584 ALAL-----DY-----RPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEP 621 (708)
Q Consensus 584 ~~G~-----~y-----~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEP 621 (708)
.+-. .| +.=.||.|+-| -+|-|- .+.+++|.+++||.
T Consensus 229 SyEvEi~Gk~~~VKpIrnLnGHSI~~y-rIH~gksVPiVkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 229 SYEVEINGKTYQVKPIRNLNGHSIAQY-RIHGGKSVPIVKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred heEEEeCCceecceeccccCCCcccce-EeecCcccceecCCcceeecCCeeEEEEe
Confidence 4422 22 33479999974 678764 36799999999995
No 42
>PRK14575 putative peptidase; Provisional
Probab=97.65 E-value=0.00036 Score=78.17 Aligned_cols=147 Identities=12% Similarity=0.128 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCc---------eEEEE
Q psy3139 40 VNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGES---------GQGVV 110 (708)
Q Consensus 40 ~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~---------g~~~v 110 (708)
.|.-+.+||+.|+++|+|+++|.+.+ ++.|+|||.+.. ..+||
T Consensus 9 ~~~~~~rlr~~m~~~glD~lvl~~p~----------------------------n~~ylTG~~~~~~~~~r~~~~~~lvv 60 (406)
T PRK14575 9 LNTVSRKLRTIMERDNIDAVIVTTCD----------------------------NFYHVTGILSFFMYTFRNTGTAIAVV 60 (406)
T ss_pred HHHHHHHHHHHHHHcCCCEEeecCcc----------------------------hheeecccccccceecccCCceEEEE
Confidence 35567899999999999999997663 599999998744 33678
Q ss_pred eCCc---cEEEeccccHHHHhcccCC---CceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCC
Q psy3139 111 TQTT---AVLWTEAKYWERADSELSG---TEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVK 184 (708)
Q Consensus 111 t~~~---a~l~td~rY~~qa~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (708)
+.+. ..+++..-...+++.+..+ ..+..... . ..|++-.- ..+... +.+.
T Consensus 61 ~~~~~~p~~~i~p~~E~~~~~~~~~~~~~~~~~~~~d-~------------------~~p~~~~~-~~~~~~----~~~~ 116 (406)
T PRK14575 61 FRDVKIPSLIIMNEFEAASLTLDMPNAELKTFPVWVD-V------------------DDPFNMRD-SANNNK----ERPI 116 (406)
T ss_pred EcCCCCCceEEechhhhhhhcccccccccccCCceEe-e------------------eccccccc-hhhhhh----cCCC
Confidence 8773 3477766666666654321 11111111 0 00110000 000000 1111
Q ss_pred CCCHH---HHHHHhc----cCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 185 SPNMN---QWIATHA----KYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 185 ~~~~~---~~l~~~~----~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
.+.+. +.+++.+ ..+++||+|...++...++.|.+.+. +.+++.. .++++.++.
T Consensus 117 ~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~lp--~~~~~d~-~~~l~~lR~ 177 (406)
T PRK14575 117 GPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVIDAVMP--NVDFVDS-SSIFNELRV 177 (406)
T ss_pred CCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHHHhCC--CCeEEEc-HHHHHHHHh
Confidence 12222 2444433 24679999999999999999987764 4677776 578888863
No 43
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.64 E-value=0.00046 Score=76.51 Aligned_cols=132 Identities=17% Similarity=0.235 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCcccccccccccc--CCc--eEEEEeCC-
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFT--GES--GQGVVTQT- 113 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgft--gs~--g~~~vt~~- 113 (708)
....|+.++|..|+++++|++++.+. .++.|+|||+ |.. ..+++..+
T Consensus 9 ~~~~rl~~~~~~~~~~~~~~~~~~~~----------------------------~n~~yltg~~~~~~~~~~~~~~~~~~ 60 (384)
T COG0006 9 EYRARLARLRELMEEAGLDALLLTSP----------------------------SNFYYLTGFDAFGFERLQALLVPAEG 60 (384)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEecCC----------------------------CceEEEeCCCCCcccceEEEEEcCCC
Confidence 45789999999999999999999654 2599999999 444 34455555
Q ss_pred ccEEEeccccHHHHhcccCCC--ceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCC---CH
Q psy3139 114 TAVLWTEAKYWERADSELSGT--EWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSP---NM 188 (708)
Q Consensus 114 ~a~l~td~rY~~qa~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 188 (708)
+++|+++++|..+|.....-. .+..... +..... .+
T Consensus 61 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~ 101 (384)
T COG0006 61 EPVLFVRGRDEEAAKETSWIKLENVEVYED---------------------------------------DEDPAAPLDLL 101 (384)
T ss_pred ceEEEEcchhHHHHHhhcccccCceEEEec---------------------------------------CCccccHHHHH
Confidence 489999999999999888631 2444432 110111 22
Q ss_pred HHHHHHhccCCCeEEECCCc--ccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 189 NQWIATHAKYTDKIASDPLK--WEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 189 ~~~l~~~~~~~~~~~~d~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
.+++........++|+|... +++..++.+++.+... +++.. .++++.++
T Consensus 102 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~~~~~-~~~i~~lR 152 (384)
T COG0006 102 GALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRA--ELVDA-SDLVDRLR 152 (384)
T ss_pred HHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCC--EEecc-HHHHHHHH
Confidence 33443322235789999886 7899999999887533 67776 58888876
No 44
>KOG2776|consensus
Probab=97.18 E-value=0.0049 Score=66.89 Aligned_cols=111 Identities=12% Similarity=0.122 Sum_probs=78.8
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHH--------HHHH-HHhhcCCCCCCCCCcccccc
Q psy3139 425 KAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLE--------CVDQ-LRGEHWSYIGNSFPPTAAHG 495 (708)
Q Consensus 425 RaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~--------~l~~-~r~~~~~~~~~SF~tIva~G 495 (708)
+.+-++.-+-..|-|+.+...++-.. -....+|. +=.|+.. +... ++.+.....|..|||.++.
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V----~~~~~~ga--sv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isv- 85 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSV----VELCQPGA--SVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISV- 85 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHH----HHHhcCCc--hHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecc-
Confidence 44556677777888876665555444 34556673 3333322 2222 2344555678999998765
Q ss_pred CCCCCcccCCCCCC-CccccCC-eEEEEeecccCCcccceeeEEecCCCC
Q psy3139 496 THATDAEYRPDAKT-NVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPT 543 (708)
Q Consensus 496 ~NaAi~Hy~p~~~t-~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt 543 (708)
|--++||.|-..+ +..|++| ++-||.|.+..|+++-+.-|+.+|.++
T Consensus 86 -nncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~ 134 (398)
T KOG2776|consen 86 -NNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAP 134 (398)
T ss_pred -cceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCC
Confidence 6677999997654 7899999 999999999988899999999998754
No 45
>PRK14576 putative endopeptidase; Provisional
Probab=96.46 E-value=0.018 Score=64.69 Aligned_cols=40 Identities=23% Similarity=0.101 Sum_probs=31.6
Q ss_pred CCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 198 YTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 198 ~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
.+.+||+|...++...+..|.+.+. +.+++.. ..+++.++
T Consensus 136 ~~~rigve~~~~~~~~~~~l~~~~~--~~~~vd~-~~~l~~lR 175 (405)
T PRK14576 136 LDKTIAIELQAMSNGGKGVLDKVAP--GLKLVDS-TALFNEIR 175 (405)
T ss_pred CCCEEEEccCCCCHHHHHHHHhhCC--CCeEEEc-HHHHHHHH
Confidence 3579999998899999988887663 5678776 57888875
No 46
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=94.33 E-value=0.23 Score=51.10 Aligned_cols=93 Identities=11% Similarity=-0.019 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-C-------CCCCceecCCCCccccCC-CccccCC
Q psy3139 544 PLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-Y-------RPQRVHSIGEFLLVQEDF-NSTLNIN 614 (708)
Q Consensus 544 ~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-y-------~HGtGHGVG~~L~VHEgP-~~~Le~G 614 (708)
+..|++...+.+++.++..+.. +|++-.+++...++.+++.|.. + .....-|... ...|-.| +.+|++|
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~-pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~h~~~~~~~l~~G 79 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIK-PGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNE-VVCHGIPDDRVLKDG 79 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCC-ceeCCCCCCcccCCC
Confidence 3578888889999888776665 5999999999999999999863 1 1111112221 1235555 5789999
Q ss_pred cEEeeCCccc--ccCeEEeeEEEEee
Q psy3139 615 FFGVVEPEYL--DCGIKIGQVIQVVP 638 (708)
Q Consensus 615 MV~SiEPGiY--~~GIRIEn~VlVte 638 (708)
+++.+++|.. .+...+..++.+.+
T Consensus 80 d~v~id~g~~~~GY~ad~~RT~~~G~ 105 (238)
T cd01086 80 DIVNIDVGVELDGYHGDSARTFIVGE 105 (238)
T ss_pred CEEEEEEEEEECCEEEEEEEEEECCC
Confidence 9999999865 45557777777654
No 47
>PLN03158 methionine aminopeptidase; Provisional
Probab=94.22 E-value=0.2 Score=56.28 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=73.8
Q ss_pred ccceeeEEecCCCC--HHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-----C---CCCCceecCC
Q psy3139 530 TTKVNAILHCGIPT--PLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-----Y---RPQRVHSIGE 599 (708)
Q Consensus 530 tTDiTRTv~~G~pt--~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-----y---~HGtGHGVG~ 599 (708)
.+++.|+..+..|. +..|++-..+.+++.++..++. +|++-.+||.++++.+.+.|-. | .....=|+..
T Consensus 128 ~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~ir-pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~ 206 (396)
T PLN03158 128 NSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIK-PGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNE 206 (396)
T ss_pred ccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccc
Confidence 56778888888765 4556777777778777776665 4999999999999998888731 1 1111111211
Q ss_pred CCccccCC-CccccCCcEEeeCCccc--ccCeEEeeEEEEee
Q psy3139 600 FLLVQEDF-NSTLNINFFGVVEPEYL--DCGIKIGQVIQVVP 638 (708)
Q Consensus 600 ~L~VHEgP-~~~Le~GMV~SiEPGiY--~~GIRIEn~VlVte 638 (708)
.-.|-.| +.+|++|+++.++.|.| .|-.-+..+++|.+
T Consensus 207 -~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 207 -VICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGN 247 (396)
T ss_pred -cccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCC
Confidence 1246556 47899999999999988 34456777777753
No 48
>KOG2413|consensus
Probab=93.15 E-value=0.23 Score=57.59 Aligned_cols=101 Identities=16% Similarity=0.224 Sum_probs=75.7
Q ss_pred HHHHHHHHhhhCCCCEEEEecccc------------chhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHh
Q psy3139 266 KVQSMKDFMSSKSVDVMVITALDQ------------IAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRN 333 (708)
Q Consensus 266 Ki~rvr~~M~e~g~DallIs~ldn------------IaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~ 333 (708)
++.++|+.|++.+++|.|+.+.|. .+||+|+.|+- ++++|+..++.|++|.+...+ +.+
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD~RY~~Q-A~~ 81 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTDGRYFQQ-AEQ 81 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEccHHHHH-HHh
Confidence 678999999999999999999886 78999999873 688999999999999876654 444
Q ss_pred hcCC-cE-EEeCcc---HhhhhhhhhhCCCEEEecCC-chHHHHHHHh
Q psy3139 334 YLGD-IV-IKPYDL---VWTDLPEFVRTGKCLYLPDE-ANFLLYAWMK 375 (708)
Q Consensus 334 ~l~~-v~-v~~Y~~---~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~ 375 (708)
.++. -+ .+...+ +.+.|.+....+++|++||. .++..+..+.
T Consensus 82 qld~~W~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~ 129 (606)
T KOG2413|consen 82 QLDSNWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLE 129 (606)
T ss_pred hhcccceeeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHH
Confidence 5543 22 233333 44556555445789999998 6777776655
No 49
>PRK05716 methionine aminopeptidase; Validated
Probab=89.44 E-value=2 Score=44.67 Aligned_cols=90 Identities=9% Similarity=-0.049 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCce----ecCC-CCccccCC-CccccCCcEE
Q psy3139 546 QRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVH----SIGE-FLLVQEDF-NSTLNINFFG 617 (708)
Q Consensus 546 qr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGH----GVG~-~L~VHEgP-~~~Le~GMV~ 617 (708)
.|++...+.+++.++..++. +|++-.+++..++..+++.|.. +.+..++ ..|. -...|-.| +.+|++||++
T Consensus 14 ~r~A~~i~~~~~~~a~~~i~-pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~l~~Gd~v 92 (252)
T PRK05716 14 MRVAGRLAAEVLDEIEPHVK-PGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPSDKVLKEGDIV 92 (252)
T ss_pred HHHHHHHHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCCCcccCCCCEE
Confidence 46677777778777666554 5999999999999999998863 1111111 1110 01235555 5789999999
Q ss_pred eeCCccc--ccCeEEeeEEEE
Q psy3139 618 VVEPEYL--DCGIKIGQVIQV 636 (708)
Q Consensus 618 SiEPGiY--~~GIRIEn~VlV 636 (708)
.++.|.. .|..-+.-++.+
T Consensus 93 ~id~g~~~~gY~~d~~RT~~v 113 (252)
T PRK05716 93 NIDVTVIKDGYHGDTSRTFGV 113 (252)
T ss_pred EEEEEEEECCEEEEeEEEEEC
Confidence 9998865 333444444444
No 50
>PRK12896 methionine aminopeptidase; Reviewed
Probab=88.99 E-value=1.7 Score=45.21 Aligned_cols=89 Identities=11% Similarity=0.057 Sum_probs=57.4
Q ss_pred eeEEecCCCCH--HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCcc
Q psy3139 534 NAILHCGIPTP--LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLV 603 (708)
Q Consensus 534 TRTv~~G~pt~--eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~V 603 (708)
.|++.+..+.+ ..|++...+-+++.++...+. +|++-.+++..++..+.+.|.. |...+.=|+.. ...
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~-pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~-~~~ 82 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVE-PGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNE-EVA 82 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCC-eeE
Confidence 46666755443 345666666667766665555 5999999999999999988863 11111111211 113
Q ss_pred ccCC-CccccCCcEEeeCCccc
Q psy3139 604 QEDF-NSTLNINFFGVVEPEYL 624 (708)
Q Consensus 604 HEgP-~~~Le~GMV~SiEPGiY 624 (708)
|-.| +.+|++|.++.++.|..
T Consensus 83 h~~p~~~~l~~Gd~v~iD~g~~ 104 (255)
T PRK12896 83 HGIPGPRVIKDGDLVNIDVSAY 104 (255)
T ss_pred ecCCCCccCCCCCEEEEEEeEE
Confidence 5445 47899999999998864
No 51
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=88.37 E-value=2.5 Score=40.34 Aligned_cols=95 Identities=13% Similarity=0.264 Sum_probs=55.5
Q ss_pred CcchHhHHHHHHHHhhhCCCCEEEEecc----------------ccchhhccccCCCCCCCcceEEEEEE-eC--CceEE
Q psy3139 260 GEPWENKVQSMKDFMSSKSVDVMVITAL----------------DQIAWLLNLRGKDNPFSPLFKAYFVI-ST--SLCVL 320 (708)
Q Consensus 260 G~~~~~Ki~rvr~~M~e~g~DallIs~l----------------dnIaWLtnlRG~Dv~~~Pvf~aylvv-~~--d~~~L 320 (708)
.+++.+|++++.+.|.+. .++||.+. .++.||||+.--| +++++ .. ++.+|
T Consensus 3 ~~~~~~RR~~l~~~l~~~--~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~L 72 (134)
T PF05195_consen 3 AEEYAERRKKLAEKLPDN--SIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKSTL 72 (134)
T ss_dssp HHHHHHHHHHHHHHSHSS--EEEEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCC--cEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEEE
Confidence 357899999999999873 24444442 3478998754222 56677 33 37899
Q ss_pred EecCCCCcHHHHh-----------hcCCcEEEeCccHhhhhhhhhhCCCEEEecC
Q psy3139 321 YLPKNKITPVLRN-----------YLGDIVIKPYDLVWTDLPEFVRTGKCLYLPD 364 (708)
Q Consensus 321 fvd~~kl~~~v~~-----------~l~~v~v~~Y~~~~~~L~~l~~~~~~I~id~ 364 (708)
|+++.....+++. ..+--++.+.+++.+.|.++.....+++.+.
T Consensus 73 F~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~ 127 (134)
T PF05195_consen 73 FVPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDL 127 (134)
T ss_dssp EE----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-T
T ss_pred EeCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEEC
Confidence 9987554443322 1211378899999999988865555566654
No 52
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=81.56 E-value=8.5 Score=41.42 Aligned_cols=78 Identities=13% Similarity=-0.061 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCCceecCCCCccccCC----CccccCCcEEeeC
Q psy3139 545 LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQRVHSIGEFLLVQEDF----NSTLNINFFGVVE 620 (708)
Q Consensus 545 eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGtGHGVG~~L~VHEgP----~~~Le~GMV~SiE 620 (708)
..|++-..+-+++.++...+. +|++-.+++....+.+.+.|....+.++=+++. ...|-.| +.+|++|+++.++
T Consensus 3 ~~r~Aa~I~~~a~~~~~~~i~-pG~te~ei~~~~~~~i~~~G~~~afp~~is~n~-~~~H~~p~~~d~~~l~~GDvV~iD 80 (291)
T cd01088 3 KYREAGEIHRQVRKYAQSLIK-PGMTLLEIAEFVENRIRELGAGPAFPVNLSINE-CAAHYTPNAGDDTVLKEGDVVKLD 80 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHcc-CCCcHHHHHHHHHHHHHHcCCCCCCCceeccCC-EeeCCCCCCCCCcccCCCCEEEEE
Confidence 456666777777777766655 599999999999999999885433333322332 1234445 2689999999999
Q ss_pred Cccc
Q psy3139 621 PEYL 624 (708)
Q Consensus 621 PGiY 624 (708)
.|..
T Consensus 81 ~G~~ 84 (291)
T cd01088 81 FGAH 84 (291)
T ss_pred EEEE
Confidence 8875
No 53
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=67.76 E-value=44 Score=34.52 Aligned_cols=78 Identities=14% Similarity=0.060 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC-CccccCCcEEeeCC
Q psy3139 545 LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF-NSTLNINFFGVVEP 621 (708)
Q Consensus 545 eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP-~~~Le~GMV~SiEP 621 (708)
..|++-..+-+++.++...+. +|++-.+|+...+..+++.|.+ |..-.+=|... ...|-.| +.+|++|.++.++-
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~-pG~tE~ei~~~~~~~~~~~G~~~~~~~~v~~g~~~-~~~H~~~~~~~l~~Gd~v~vD~ 80 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASR-PGMSEYELEAEFEYEFRSRGARLAYSYIVAAGSNA-AILHYVHNDQPLKDGDLVLIDA 80 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCc-CCCcHHHHHHHHHHHHHHcCCCcCCCCeEEECCCc-cccCCCcCCCcCCCCCEEEEEe
Confidence 356677777777767665555 5999999999999999999865 32222222222 2346666 57899999999987
Q ss_pred ccc
Q psy3139 622 EYL 624 (708)
Q Consensus 622 GiY 624 (708)
|..
T Consensus 81 g~~ 83 (243)
T cd01087 81 GAE 83 (243)
T ss_pred Cce
Confidence 653
No 54
>TIGR03241 arg_catab_astB succinylarginine dihydrolase. Members of this family are succinylarginine dihydrolase (EC 3.5.3.23), the second of five enzymes in the arginine succinyltransferase (AST) pathway.
Probab=67.72 E-value=8.3 Score=43.22 Aligned_cols=151 Identities=17% Similarity=0.269 Sum_probs=94.0
Q ss_pred CCcceecccccCCcchHhHHHHHHHHhhhCCCCEEEEecccc--------chhhccccCCCCCCCcceEEEEEEeCC-ce
Q psy3139 248 PSVVFIHPLEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQ--------IAWLLNLRGKDNPFSPLFKAYFVISTS-LC 318 (708)
Q Consensus 248 ~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldn--------IaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~ 318 (708)
.+.+|.|...| ..-...++.+|++|...+.+-.+|.-+++ -.||+| +-++-.++ +.
T Consensus 256 ~~vLf~He~AF--~d~~~~~~~ir~k~~~~~~~~~~ieVp~~~vsv~DAV~sYLFN-------------SQLlt~pdg~M 320 (443)
T TIGR03241 256 RNVLFHHQQAF--LNQSQVLDELRAKLAGLGQQFVAIEVPDAEVSVADAVSSYLFN-------------SQLLSREDGKM 320 (443)
T ss_pred cceeeEhHhhh--cCHHHHHHHHHHHhhccCCCeEEEEeccccCcHHHHHHHhhhc-------------ceeeecCCCcE
Confidence 35677888888 56677899999999876677666665544 235554 44444444 56
Q ss_pred EEEecCCCCcHHHHhhcCCcEEEeCccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccc
Q psy3139 319 VLYLPKNKITPVLRNYLGDIVIKPYDLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWR 398 (708)
Q Consensus 319 ~Lfvd~~kl~~~v~~~l~~v~v~~Y~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~ 398 (708)
.|.++.+ .+ .-..++.+|.++...+..|. .-..+.+.+++.+
T Consensus 321 ~Lv~P~E-----cr---------~n~~v~~yl~~l~~~~~PI~--~v~~fDlrqSM~N---------------------- 362 (443)
T TIGR03241 321 MLVVPEE-----CR---------ENAAVWAYLNELVAGGGPID--EVRVFDLRESMRN---------------------- 362 (443)
T ss_pred EEEechH-----hh---------cCHHHHHHHHHHHhcCCCcc--eEEEecchhhhhc----------------------
Confidence 6666542 11 12334555666543211110 0011224444332
Q ss_pred cccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHH
Q psy3139 399 TAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVL 470 (708)
Q Consensus 399 ~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva 470 (708)
+ +.+.+.+||-+-|+.|++.+-.+...+..-+.++-.|+++..+.- ++.-|++
T Consensus 363 -----------G------GGPACLRLRVvl~~~E~~Avnp~~lm~~~l~~~L~~wV~~hYRdr--L~~~DLa 415 (443)
T TIGR03241 363 -----------G------GGPACLRLRVVLNDAELAAVNPAVMMNDALFATLNAWVDRHYRDR--LSAADLA 415 (443)
T ss_pred -----------C------CCceeeeeeeeCCHHHHhhcCcceecCHHHHHHHHHHHHHhcccc--CChhhcc
Confidence 1 123467899999999999998888888777788888999888765 7777765
No 55
>PRK07281 methionine aminopeptidase; Reviewed
Probab=65.63 E-value=41 Score=36.33 Aligned_cols=75 Identities=11% Similarity=-0.009 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC------------CCCCCceecCCCCccccCC-CccccC
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD------------YRPQRVHSIGEFLLVQEDF-NSTLNI 613 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~------------y~HGtGHGVG~~L~VHEgP-~~~Le~ 613 (708)
|++-..+.+++.++...+ +||++-.+|+...+..+.+.|.. |.+-.+=|+.. --.|-.| +.+|++
T Consensus 14 r~A~~i~~~~~~~~~~~i-~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~-~~~H~~p~~~~l~~ 91 (286)
T PRK07281 14 DRAGDFLASIHIGLRDLI-KPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLND-EVAHAFPRHYILKE 91 (286)
T ss_pred HHHHHHHHHHHHHHHHHC-cCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccc-cccCCCCCCcCcCC
Confidence 444555556666655554 45999999999999998887742 22222222221 2346666 478999
Q ss_pred CcEEeeCCcc
Q psy3139 614 NFFGVVEPEY 623 (708)
Q Consensus 614 GMV~SiEPGi 623 (708)
|.++.+.=|.
T Consensus 92 Gd~v~iD~g~ 101 (286)
T PRK07281 92 GDLLKVDMVL 101 (286)
T ss_pred CCEEEEEecc
Confidence 9999998653
No 56
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=61.22 E-value=62 Score=32.10 Aligned_cols=91 Identities=13% Similarity=0.043 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-CCCCCceecCC-CCccccCC-CccccCCcEEeeCCc
Q psy3139 546 QRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-YRPQRVHSIGE-FLLVQEDF-NSTLNINFFGVVEPE 622 (708)
Q Consensus 546 qr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-y~HGtGHGVG~-~L~VHEgP-~~~Le~GMV~SiEPG 622 (708)
.|++-.++-+++.++...+. +|++-.+|....++.+.+.|.. +.+.+--+.|. ....|-.| +.+|++|.++.++-|
T Consensus 4 ~r~a~~i~~~~~~~~~~~~~-~G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~gd~v~id~g 82 (208)
T cd01092 4 LRKAARIADKAFEELLEFIK-PGMTEREVAAELEYFMRKLGAEGPSFDTIVASGPNSALPHGVPSDRKIEEGDLVLIDFG 82 (208)
T ss_pred HHHHHHHHHHHHHHHHHHCc-CCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECccccccCCCCCCcCcCCCCEEEEEee
Confidence 46666667777766665554 5999999999999988888864 33333333331 12345555 578999999999976
Q ss_pred cc--ccCeEEeeEEEEe
Q psy3139 623 YL--DCGIKIGQVIQVV 637 (708)
Q Consensus 623 iY--~~GIRIEn~VlVt 637 (708)
.. .|-.-+.-++++.
T Consensus 83 ~~~~gy~~d~~RT~~~g 99 (208)
T cd01092 83 AIYDGYCSDITRTVAVG 99 (208)
T ss_pred eeECCEeccceeEEECC
Confidence 53 2223344444443
No 57
>PRK12897 methionine aminopeptidase; Reviewed
Probab=57.99 E-value=64 Score=33.60 Aligned_cols=75 Identities=8% Similarity=-0.009 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCC-----C---CCCceecCCCCccccCC-CccccCCcEE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDY-----R---PQRVHSIGEFLLVQEDF-NSTLNINFFG 617 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y-----~---HGtGHGVG~~L~VHEgP-~~~Le~GMV~ 617 (708)
|++-..+-+++.++...+ .+|++-.+++......+++.|... . ....=|.+. ...|-.| +.+|++|.++
T Consensus 14 r~A~~i~~~~~~~~~~~~-~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~-~~~H~~p~~~~l~~Gd~V 91 (248)
T PRK12897 14 HESGKLLASCHREIAKIM-KPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVND-EMCHAFPADVPLTEGDIV 91 (248)
T ss_pred HHHHHHHHHHHHHHHhhc-CCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCC-EeecCCCCCcccCCCCEE
Confidence 344444455665655554 469999999999999999988642 1 111112222 1347677 4689999999
Q ss_pred eeCCcc
Q psy3139 618 VVEPEY 623 (708)
Q Consensus 618 SiEPGi 623 (708)
.++=|.
T Consensus 92 ~iD~g~ 97 (248)
T PRK12897 92 TIDMVV 97 (248)
T ss_pred EEEeeE
Confidence 988553
No 58
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=56.50 E-value=49 Score=35.36 Aligned_cols=76 Identities=14% Similarity=0.087 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC-----CC---CCCCceecCCCCccccCCC--ccccCCcE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL-----DY---RPQRVHSIGEFLLVQEDFN--STLNINFF 616 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~-----~y---~HGtGHGVG~~L~VHEgP~--~~Le~GMV 616 (708)
|++-..+-++...+...+ .||++-.+||.++++.+.+.|. .| .-.+.=.|-. --.|--|+ .+|++|.+
T Consensus 15 r~Ag~i~a~~l~~~~~~v-~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe-~v~HgiP~d~~vlk~GDi 92 (255)
T COG0024 15 REAGKIAAKALKEVASLV-KPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNE-VVAHGIPGDKKVLKEGDI 92 (255)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhh-eeeecCCCCCcccCCCCE
Confidence 444444555555555544 4699999999999999997653 12 1111111111 01244454 78999999
Q ss_pred EeeCCccc
Q psy3139 617 GVVEPEYL 624 (708)
Q Consensus 617 ~SiEPGiY 624 (708)
+.+--|.+
T Consensus 93 v~IDvg~~ 100 (255)
T COG0024 93 VKIDVGAH 100 (255)
T ss_pred EEEEEEEE
Confidence 99987765
No 59
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=53.77 E-value=1.1e+02 Score=29.75 Aligned_cols=78 Identities=15% Similarity=0.027 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCCceecCC-CCccccCC-CccccCCcEEeeCCcc
Q psy3139 546 QRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQRVHSIGE-FLLVQEDF-NSTLNINFFGVVEPEY 623 (708)
Q Consensus 546 qr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGtGHGVG~-~L~VHEgP-~~~Le~GMV~SiEPGi 623 (708)
.|++-..+-+++.++...+. +|++-.++....++.+.+.|..+.+.+-=++|. ....|-.| +.++++|.++.++-|.
T Consensus 4 ~r~a~~i~~~~~~~~~~~~~-~G~te~ei~~~~~~~~~~~g~~~~~~~~v~~g~~~~~~h~~~~~~~i~~gd~v~~d~g~ 82 (207)
T cd01066 4 LRKAAEIAEAAMAAAAEAIR-PGVTEAEVAAAIEQALRAAGGYPAGPTIVGSGARTALPHYRPDDRRLQEGDLVLVDLGG 82 (207)
T ss_pred HHHHHHHHHHHHHHHHHHCc-CCCCHHHHHHHHHHHHHHcCCCCCCCcEEEECccccCcCCCCCCCCcCCCCEEEEEece
Confidence 45666666677666665554 599999999999999999987443333334442 12455555 4789999999998765
Q ss_pred c
Q psy3139 624 L 624 (708)
Q Consensus 624 Y 624 (708)
.
T Consensus 83 ~ 83 (207)
T cd01066 83 V 83 (207)
T ss_pred e
Confidence 3
No 60
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=51.30 E-value=84 Score=32.47 Aligned_cols=75 Identities=11% Similarity=-0.054 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-CCCC-----CceecCC-CCccccCC-CccccCCcEEee
Q psy3139 548 SVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-YRPQ-----RVHSIGE-FLLVQEDF-NSTLNINFFGVV 619 (708)
Q Consensus 548 ~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-y~HG-----tGHGVG~-~L~VHEgP-~~~Le~GMV~Si 619 (708)
++-..+-+++.++..++. +|++-.++....+..+++.|.. ..++ +..+.|. -...|-.| +.+|++|.++.+
T Consensus 14 ~A~~i~~~~~~~~~~~i~-~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~~~l~~Gd~v~i 92 (247)
T TIGR00500 14 KAGRLAAEVLEELEREVK-PGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDKKVLKDGDIVNI 92 (247)
T ss_pred HHHHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCCcccCCCCEEEE
Confidence 334444455555554454 5999999999999999998853 1111 1112221 01235556 578999999998
Q ss_pred CCcc
Q psy3139 620 EPEY 623 (708)
Q Consensus 620 EPGi 623 (708)
+-|.
T Consensus 93 D~g~ 96 (247)
T TIGR00500 93 DVGV 96 (247)
T ss_pred EEEE
Confidence 8653
No 61
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=49.57 E-value=19 Score=34.39 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEE-eC--Ccc
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVV-TQ--TTA 115 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~v-t~--~~a 115 (708)
...+|.++|-+.|.++ .++||++++... -|..++|.= -.+.+-.|||||.=.++.+|+ .. ++.
T Consensus 5 ~~~~RR~~l~~~l~~~--~~vil~~~~~~~-----~~~D~~y~F-------rQ~s~F~YLTG~~ep~~~lvl~~~~~~~~ 70 (134)
T PF05195_consen 5 EYAERRKKLAEKLPDN--SIVILPGGPEKY-----RSNDIEYPF-------RQDSNFYYLTGFNEPDAVLVLKDGESGKS 70 (134)
T ss_dssp HHHHHHHHHHHHSHSS--EEEEEE----EE-----EETTEEE------------HHHHHHH---STT-EEEEEECTTEEE
T ss_pred HHHHHHHHHHHhcCCC--cEEEEECCCeee-----ecCCCcccc-------ccCCcEEEEeCCCCCCEEEEEecCCCCeE
Confidence 3568888888888873 566777665431 223445554 456778999999988888888 22 267
Q ss_pred EEEecc
Q psy3139 116 VLWTEA 121 (708)
Q Consensus 116 ~l~td~ 121 (708)
+||+.-
T Consensus 71 ~LF~~~ 76 (134)
T PF05195_consen 71 TLFVPP 76 (134)
T ss_dssp EEEE--
T ss_pred EEEeCC
Confidence 777643
No 62
>PRK13281 succinylarginine dihydrolase; Provisional
Probab=49.37 E-value=21 Score=40.12 Aligned_cols=50 Identities=12% Similarity=0.169 Sum_probs=41.0
Q ss_pred chhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHH
Q psy3139 419 SPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVL 470 (708)
Q Consensus 419 ~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva 470 (708)
+.+.++|-+-|+.|++.+-.+...+..-+.++-.|++...+.- ++.-|++
T Consensus 364 PACLRLRVvl~~~El~Avnp~~lm~~~l~~~L~~wV~~hYRd~--L~~~DLa 413 (442)
T PRK13281 364 PACLRLRVVLNEAELAAVNPAVLMNDALFDRLNAWVDRHYRDR--LTPADLA 413 (442)
T ss_pred ceeeeeeeeCCHHHHHhcCCceecCHHHHHHHHHHHHHhcccc--CChhhcc
Confidence 3467899999999999998888888777778888999888765 7777765
No 63
>PRK12318 methionine aminopeptidase; Provisional
Probab=48.02 E-value=1e+02 Score=33.23 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC-----CCCC-----CCceecCCCCccccCC-CccccCCc
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL-----DYRP-----QRVHSIGEFLLVQEDF-NSTLNINF 615 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~-----~y~H-----GtGHGVG~~L~VHEgP-~~~Le~GM 615 (708)
|++-..+-+++.++..++. +|++=.+|+.+++..+.+.|. +|+. ...=|.-. ...|-.| +.+|++|.
T Consensus 53 R~Aa~I~~~a~~a~~~~ir-pG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~-~~~H~~p~~~~l~~GD 130 (291)
T PRK12318 53 RKACQVTARILDALCEAAK-EGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNE-VICHGIPNDIPLKNGD 130 (291)
T ss_pred HHHHHHHHHHHHHHHHhcc-CCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccc-eeecCCCCCCccCCCC
Confidence 3444444455666555554 599999999988888877773 2211 00111111 1236556 47899999
Q ss_pred EEeeCCccc
Q psy3139 616 FGVVEPEYL 624 (708)
Q Consensus 616 V~SiEPGiY 624 (708)
++.++-|..
T Consensus 131 ~V~vD~g~~ 139 (291)
T PRK12318 131 IMNIDVSCI 139 (291)
T ss_pred EEEEEEeEE
Confidence 999997753
No 64
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=43.62 E-value=1.5e+02 Score=33.59 Aligned_cols=94 Identities=10% Similarity=-0.025 Sum_probs=55.1
Q ss_pred CHHHHHHHHHH----HHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC-CCCC--CCceecCCC-------CccccCC-
Q psy3139 543 TPLQRSVYTAI----LKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL-DYRP--QRVHSIGEF-------LLVQEDF- 607 (708)
Q Consensus 543 t~eqr~~yt~V----Lka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~-~y~H--GtGHGVG~~-------L~VHEgP- 607 (708)
++++.+.|..+ -+++.++...+. ||++-.+|+..+.+.+.+.+- .|.. ...+|+++- ...|--|
T Consensus 15 ~~~eI~~~r~Aa~Ia~~~l~~~~~~ik-pG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~ 93 (389)
T TIGR00495 15 NPEVVTKYKMAGEIANNVLKSVVEACS-PGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPL 93 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCC
Confidence 34444444433 344445555554 599999999988888876442 1211 112233221 1235555
Q ss_pred ----CccccCCcEEeeCCccc--ccCeEEeeEEEEe
Q psy3139 608 ----NSTLNINFFGVVEPEYL--DCGIKIGQVIQVV 637 (708)
Q Consensus 608 ----~~~Le~GMV~SiEPGiY--~~GIRIEn~VlVt 637 (708)
+..|++|.++.+.-|.. .|-.=+.-+++|.
T Consensus 94 ~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG 129 (389)
T TIGR00495 94 KSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVG 129 (389)
T ss_pred CCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEEC
Confidence 36899999999998876 4444566666664
No 65
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=42.13 E-value=1.4e+02 Score=30.75 Aligned_cols=77 Identities=12% Similarity=-0.120 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC---CCCCCC------ceecCCCCccccCC-CccccCC
Q psy3139 545 LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL---DYRPQR------VHSIGEFLLVQEDF-NSTLNIN 614 (708)
Q Consensus 545 eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~---~y~HGt------GHGVG~~L~VHEgP-~~~Le~G 614 (708)
..|++-..+-+++.++...+. ||++-.+|++.+...+.+.|- .|.+-. +=|... ...|-.| +.+|++|
T Consensus 3 ~ir~Aa~i~d~~~~~~~~~i~-pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~-~~~H~~~~~r~l~~G 80 (228)
T cd01090 3 LIRHGARIADIGGAAVVEAIR-EGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINT-DGAHNPVTNRKVQRG 80 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccc-cccCCCCCCcccCCC
Confidence 356666677777777766665 599999999998999888773 232211 112222 1346555 5789999
Q ss_pred cEEeeCCcc
Q psy3139 615 FFGVVEPEY 623 (708)
Q Consensus 615 MV~SiEPGi 623 (708)
.++.++-|.
T Consensus 81 D~v~~d~g~ 89 (228)
T cd01090 81 DILSLNCFP 89 (228)
T ss_pred CEEEEEEeE
Confidence 999998664
No 66
>PRK10879 proline aminopeptidase P II; Provisional
Probab=41.63 E-value=63 Score=36.92 Aligned_cols=70 Identities=17% Similarity=0.305 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCC-----
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQT----- 113 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~----- 113 (708)
...+|.++|.+.|.+. +++||++++...- |..++|.= -.+.+-.|||||.=-.+.+|+.++
T Consensus 5 ~~~~rR~~l~~~~~~~--~~~v~~~~~~~~~-----~~d~~y~F-------rq~s~F~YltG~~ep~~~lv~~~~~~~~~ 70 (438)
T PRK10879 5 EFQRRRQALLAKMQPG--SAALIFAAPEATR-----SADSEYPY-------RQNSDFWYFTGFNEPEAVLVLIKSDDTHN 70 (438)
T ss_pred HHHHHHHHHHhhCCCC--cEEEEeCCCcccc-----CCCCCCCc-------cCCCceeeeeCCCCCCeEEEEecCCCCCC
Confidence 4567888888888653 4778888765522 33666765 567889999999966666666442
Q ss_pred ccEEEeccc
Q psy3139 114 TAVLWTEAK 122 (708)
Q Consensus 114 ~a~l~td~r 122 (708)
+.+||..-|
T Consensus 71 ~~~Lf~~~~ 79 (438)
T PRK10879 71 HSVLFNRVR 79 (438)
T ss_pred eEEEEeCCC
Confidence 246776555
No 67
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=39.33 E-value=12 Score=35.33 Aligned_cols=47 Identities=23% Similarity=0.538 Sum_probs=36.2
Q ss_pred hHHHHHHH---HHHHHHHHhhcccccccccccccCCcCHHHHHHHHHHHHHhcCCc
Q psy3139 5 NFVFKILL---SGVLLAGCYASGAHHNTSLAHSHVTSDVNQRLSLLRSVMRSRGVS 57 (708)
Q Consensus 5 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~lr~~m~~~~~~ 57 (708)
.++.+.|. .||+++||..-.-||.. -.....+|.+.+|+.|++.|++
T Consensus 43 ~~il~Af~~GADGV~V~gC~~g~Ch~~~------Gn~~a~~Rv~~~k~~L~~~Gi~ 92 (124)
T PF02662_consen 43 EFILRAFEKGADGVLVAGCHPGDCHYRE------GNYRAEKRVERLKKLLEELGIE 92 (124)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCCcch------hhHHHHHHHHHHHHHHHHcCCC
Confidence 46777774 47999999876666542 2335789999999999999987
No 68
>KOG2738|consensus
Probab=38.85 E-value=92 Score=34.13 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=55.8
Q ss_pred CCHHH----HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCC-----CC---CCCCceecCCCCccccCC-C
Q psy3139 542 PTPLQ----RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALAL-----DY---RPQRVHSIGEFLLVQEDF-N 608 (708)
Q Consensus 542 pt~eq----r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~-----~y---~HGtGHGVG~~L~VHEgP-~ 608 (708)
+++++ |++..+..+....++.++. ||++-.+||.++.+...+.|- +| +-..=-.|--+ -.|-=| .
T Consensus 117 ~~~e~ie~mR~ac~LarevLd~Aa~~v~-PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEv-iCHGIPD~ 194 (369)
T KOG2738|consen 117 LDPEGIEGMRKACRLAREVLDYAATLVR-PGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEV-ICHGIPDS 194 (369)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhhcC-CCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhhe-eecCCCCc
Confidence 45554 4444444455545555554 599999999999998888872 12 22211122110 124446 4
Q ss_pred ccccCCcEEeeCCccc--ccCeEEeeEEEEee
Q psy3139 609 STLNINFFGVVEPEYL--DCGIKIGQVIQVVP 638 (708)
Q Consensus 609 ~~Le~GMV~SiEPGiY--~~GIRIEn~VlVte 638 (708)
++||.|.++-+.-.+| .|==-+..+++|.+
T Consensus 195 RpLedGDIvNiDVtvY~~GyHGDlneTffvG~ 226 (369)
T KOG2738|consen 195 RPLEDGDIVNIDVTVYLNGYHGDLNETFFVGN 226 (369)
T ss_pred CcCCCCCEEeEEEEEEeccccCccccceEeec
Confidence 7999999999988877 22123444555544
No 69
>cd00383 trans_reg_C Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and a response regulator. The former autophosphorylates in a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. The C-terminal effector domain contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunite of RNA polymerase.
Probab=37.14 E-value=88 Score=26.90 Aligned_cols=57 Identities=12% Similarity=0.230 Sum_probs=37.7
Q ss_pred ccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCC
Q psy3139 209 WEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSV 279 (708)
Q Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~ 279 (708)
++-.++.-|.-.+...| +.+.- +.+++.+|.+.+..+ -.....-+.++|++|.+.+.
T Consensus 24 Lt~~e~~lL~~L~~~~~-~~vs~-~~l~~~lw~~~~~~~------------~~~l~~~I~rLRkkl~~~~~ 80 (95)
T cd00383 24 LTPKEFELLELLARNPG-RVLSR-EQLLEAVWGDDYDVD------------DRTVDVHISRLRKKLEDDPS 80 (95)
T ss_pred eCHHHHHHHHHHHhCCC-CcCCH-HHHHHHhcCCCCCCC------------cccHHHHHHHHHHHhccCCC
Confidence 46667766665555444 44443 789999997654222 14467789999999987653
No 70
>PRK08671 methionine aminopeptidase; Provisional
Probab=36.58 E-value=2.9e+02 Score=29.71 Aligned_cols=77 Identities=12% Similarity=-0.073 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCCceecCCCCccccCC----CccccCCcEEeeCC
Q psy3139 546 QRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQRVHSIGEFLLVQEDF----NSTLNINFFGVVEP 621 (708)
Q Consensus 546 qr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGtGHGVG~~L~VHEgP----~~~Le~GMV~SiEP 621 (708)
.|++-..+-++..++...+ .+|++-.+|.......+.+.|......+.=++|.. ..|-.| +.+|++|.++.++-
T Consensus 5 ~r~A~~I~~~~~~~~~~~i-~pG~se~ei~~~~~~~i~~~g~~~afp~~vs~n~~-~~H~~p~~~d~~~l~~GDvV~iD~ 82 (291)
T PRK08671 5 YLEAGKIASKVREEAAKLI-KPGAKLLDVAEFVENRIRELGAKPAFPCNISINEV-AAHYTPSPGDERVFPEGDVVKLDL 82 (291)
T ss_pred HHHHHHHHHHHHHHHHHhc-cCCCcHHHHHHHHHHHHHHcCCccCCCCEEeeCCC-ccCCCCCCCCCcccCCCCEEEEEE
Confidence 3455555555555555554 45999999999999999888753211122234431 345555 35799999999997
Q ss_pred ccc
Q psy3139 622 EYL 624 (708)
Q Consensus 622 GiY 624 (708)
|.-
T Consensus 83 G~~ 85 (291)
T PRK08671 83 GAH 85 (291)
T ss_pred eEE
Confidence 754
No 71
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=36.34 E-value=66 Score=31.89 Aligned_cols=73 Identities=19% Similarity=0.228 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhcC------CcEEEEeCCC-CCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeC
Q psy3139 40 VNQRLSLLRSVMRSRG------VSVYIIVNGD-DHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQ 112 (708)
Q Consensus 40 ~~~rl~~lr~~m~~~~------~~~~ii~~~d-~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~ 112 (708)
..+||.+|.+..++.+ +|+++|..+. +.-+ .|.- .-.--.||-||-=.+-..|+|+
T Consensus 6 F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~---------~Y~K--------s~aLq~WLlGYEfpdTiiv~tk 68 (163)
T PF14826_consen 6 FHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDN---------PYSK--------STALQTWLLGYEFPDTIIVFTK 68 (163)
T ss_dssp HHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTS---------TT-H--------HHHHHHHHHSS--SSEEEEEET
T ss_pred HHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCc---------cchh--------HHHHHHHHhcccHhhhhhhhcC
Confidence 5789999999999875 9999998773 1112 3321 0012369999998888999999
Q ss_pred CccEEEeccc---cHHHHhc
Q psy3139 113 TTAVLWTEAK---YWERADS 129 (708)
Q Consensus 113 ~~a~l~td~r---Y~~qa~~ 129 (708)
++-+++|-.+ |-+|..+
T Consensus 69 ~~i~~ltS~KKa~~L~~l~~ 88 (163)
T PF14826_consen 69 KKIHFLTSKKKAKFLEPLKK 88 (163)
T ss_dssp TEEEEEEEHHHHHCCCCHCC
T ss_pred CEEEEEeCHHHHHHHHHHhh
Confidence 9999998764 5556654
No 72
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=36.27 E-value=1.7e+02 Score=33.19 Aligned_cols=55 Identities=15% Similarity=0.218 Sum_probs=37.7
Q ss_pred CEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCCCEEEEeccc
Q psy3139 226 LQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSVDVMVITALD 288 (708)
Q Consensus 226 ~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ld 288 (708)
++|.+. .+++..+...+|. .++. .-|+-|+- +=++..+++|+++++|.++...++
T Consensus 299 l~L~~~-pdIl~~l~~~~~~---~~~~---VGFaaEt~-~~~~~A~~kl~~k~~D~ivaN~i~ 353 (399)
T PRK05579 299 LELVPN-PDILAEVAALKDK---RPFV---VGFAAETG-DVLEYARAKLKRKGLDLIVANDVS 353 (399)
T ss_pred EEEEeC-cHHHHHHHhccCC---CCEE---EEEccCCc-hHHHHHHHHHHHcCCeEEEEecCC
Confidence 567776 5888888655542 2222 24554442 338899999999999999988864
No 73
>smart00862 Trans_reg_C Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.
Probab=34.38 E-value=1.2e+02 Score=24.93 Aligned_cols=57 Identities=11% Similarity=0.221 Sum_probs=36.0
Q ss_pred ccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCC-CCCCCcceecccccCCcchHhHHHHHHHHhhhCCC
Q psy3139 209 WEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKP-SLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSV 279 (708)
Q Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp-~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~ 279 (708)
++..+++-| ..|-.+.-+.+. .+.+++.+|.+++ ..+ -.....-+.++|+.|.+.+.
T Consensus 6 Lt~~e~~lL-~~L~~~~~~~vs-~~~l~~~lw~~~~~~~~------------~~~l~~~i~~LR~~l~~~~~ 63 (78)
T smart00862 6 LTPKEFRLL-ELLLRNPGRVVS-REELLEAVWGDDDDDVD------------DNTLDVHISRLRKKLEDDGA 63 (78)
T ss_pred cCHHHHHHH-HHHHhCCCCccC-HHHHHHHHcCCCCCCCc------------cchHHHHHHHHHHHHhcCCC
Confidence 456667644 444333223333 3789999997654 111 25578889999999987653
No 74
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=33.41 E-value=65 Score=35.92 Aligned_cols=50 Identities=22% Similarity=0.216 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhhcccccccccccccCCc---CHHHHHHHHHHHHHhcCCcEEE
Q psy3139 10 ILLSGVLLAGCYASGAHHNTSLAHSHVTS---DVNQRLSLLRSVMRSRGVSVYI 60 (708)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~rl~~lr~~m~~~~~~~~i 60 (708)
.+|..+||+||.++.+.+...+...|.-. -.+.=|..+++.++ .|+|++=
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~pliiAHRGas~~~PENTl~Af~~A~~-~GaD~IE 59 (355)
T PRK11143 7 ALLLAALLAGSAAAAADSAEKIVIAHRGASGYLPEHTLPAKAMAYA-QGADYLE 59 (355)
T ss_pred HHHHHHHHHHhhHhhhcCCCcEEEECCCCCCCCCcchHHHHHHHHH-cCCCEEE
Confidence 46678999999999887777766555542 24666777888886 5788653
No 75
>PF00486 Trans_reg_C: Transcriptional regulatory protein, C terminal; InterPro: IPR001867 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain that is almost always found associated with the response regulator receiver domain (see IPR001789 from INTERPRO). It may play a role in DNA binding [].; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2K4J_A 2JPB_A 1ODD_A 1OPC_A 1KGS_A 2PMU_E 2JZY_A 1GXP_B 1QQI_A 2Z33_A ....
Probab=31.90 E-value=80 Score=26.11 Aligned_cols=59 Identities=17% Similarity=0.333 Sum_probs=40.9
Q ss_pred cccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCCC
Q psy3139 208 KWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSVD 280 (708)
Q Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~D 280 (708)
.+|-.++.-|.-.+...| +.+.- +.+++.+|.+.+ ..+..+...-+.++|+.|++.+.+
T Consensus 5 ~Lt~~e~~lL~~L~~~~~-~~vs~-~~l~~~~w~~~~------------~~~~~~l~~~I~rLR~kL~~~~~~ 63 (77)
T PF00486_consen 5 KLTPKEFRLLELLLRNPG-RVVSR-EELIEALWGDEE------------DVSDNSLDVHISRLRKKLEDAGGD 63 (77)
T ss_dssp ESSHHHHHHHHHHHHTTT-SEEEH-HHHHHHHTSSSS------------TTCTHHHHHHHHHHHHHHHSSTTS
T ss_pred ecCHHHHHHHHHHHhCCC-CCCCH-HHhCChhhhccc------------ccchhhHHHHHHHHHHHHhhcCCC
Confidence 346667776765555544 44444 789999998654 234567788999999999987533
No 76
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=31.00 E-value=3.5e+02 Score=29.22 Aligned_cols=84 Identities=11% Similarity=0.012 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC----CccccCCcEEeeCCc
Q psy3139 549 VYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF----NSTLNINFFGVVEPE 622 (708)
Q Consensus 549 ~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP----~~~Le~GMV~SiEPG 622 (708)
+-..+-+++..+...+ .+|++-.+|.......+.+.|-. |+... +++. ...|-.| +..|++|.++.+.-|
T Consensus 11 A~~I~~~~~~~~~~~i-~~G~se~el~~~~e~~~~~~g~~~aFp~~v--s~n~-~~~H~~p~~~d~~~l~~GDvV~iD~G 86 (295)
T TIGR00501 11 AGKIHSKVRREAADRI-VPGVKLLEVAEFVENRIRELGAEPAFPCNI--SINE-CAAHFTPKAGDKTVFKDGDVVKLDLG 86 (295)
T ss_pred HHHHHHHHHHHHHHHC-cCCCCHHHHHHHHHHHHHHcCCCCCCCcce--ecCC-EeeCCCCCCCcCccCCCCCEEEEEEe
Confidence 3333344444444444 45999999999999988888754 32211 2222 1234444 357999999999988
Q ss_pred cc--ccCeEEeeEEEE
Q psy3139 623 YL--DCGIKIGQVIQV 636 (708)
Q Consensus 623 iY--~~GIRIEn~VlV 636 (708)
.. .|-.-+.-|+.+
T Consensus 87 ~~~dGY~aD~arT~~v 102 (295)
T TIGR00501 87 AHVDGYIADTAITVDL 102 (295)
T ss_pred EEECCEEEEEEEEEEe
Confidence 65 232334444444
No 77
>COG2834 LolA Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane]
Probab=29.72 E-value=1.6e+02 Score=30.21 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=29.5
Q ss_pred chhhHHHHHHHHHHHHHHHhhcccccccccccccCCcCHHHHHHHHHHHHHhcCCcEEE
Q psy3139 2 ACINFVFKILLSGVLLAGCYASGAHHNTSLAHSHVTSDVNQRLSLLRSVMRSRGVSVYI 60 (708)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~lr~~m~~~~~~~~i 60 (708)
.++-+++-+++..+++.||.+++ .+.++|+..-+.++.-..+...
T Consensus 4 ~~~~~~~~~~l~~~f~~~~~~~~--------------~~~~~l~~~~~~i~~~s~~f~q 48 (211)
T COG2834 4 MMMKLLLALALLLLFLSACAQAG--------------EAASQLKERLAKVKSYSASFTQ 48 (211)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhh--------------HHHHHHHHHHHhhccceeEEEE
Confidence 35556777788888899999988 2445555555555555555444
No 78
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=29.33 E-value=3e+02 Score=27.29 Aligned_cols=77 Identities=12% Similarity=-0.006 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHH-HHHcCCC-CCCCCceecCC-CCccccCC-CccccCCcEEeeC
Q psy3139 545 LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQP-LLALALD-YRPQRVHSIGE-FLLVQEDF-NSTLNINFFGVVE 620 (708)
Q Consensus 545 eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~-L~~~G~~-y~HGtGHGVG~-~L~VHEgP-~~~Le~GMV~SiE 620 (708)
..|++...+-+++.++...+. +|++-.++...+.+. +.+.|.. ..|..-=+.|. ..-.|-.| +.+|++|+++.++
T Consensus 2 ~~R~a~~i~~~~~~~~~~~~~-~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~gd~v~id 80 (207)
T PF00557_consen 2 CMRKAARIADAAMEAAMEALR-PGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTDRRLQEGDIVIID 80 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-TTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCSSBESTTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcc-CCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccceeeecCCcceee
Confidence 356777777778777776665 599999999999887 6777742 22221112221 00123334 5789999999887
Q ss_pred Cc
Q psy3139 621 PE 622 (708)
Q Consensus 621 PG 622 (708)
=|
T Consensus 81 ~~ 82 (207)
T PF00557_consen 81 FG 82 (207)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 79
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress).
Probab=28.74 E-value=53 Score=30.60 Aligned_cols=26 Identities=38% Similarity=0.478 Sum_probs=20.9
Q ss_pred cccccCCHHHHH--HHHHHHHHHHHHHc
Q psy3139 660 IDTSQLEPHEIR--WINEFHATVRYVIG 685 (708)
Q Consensus 660 Id~~~Lt~~e~~--wln~yh~~v~~~~~ 685 (708)
+|.+.|+++|.. |||-||..+...+.
T Consensus 2 v~~~~l~~~e~lAFwIN~yNal~~h~~l 29 (117)
T PF04784_consen 2 VDLSSLSREEKLAFWINLYNALVLHAIL 29 (117)
T ss_pred cChHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567778998885 99999999877544
No 80
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=22.68 E-value=6e+02 Score=25.96 Aligned_cols=92 Identities=13% Similarity=0.006 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-CCC--CCceecCCC--C-----ccccCC-----Cc
Q psy3139 545 LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD-YRP--QRVHSIGEF--L-----LVQEDF-----NS 609 (708)
Q Consensus 545 eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~-y~H--GtGHGVG~~--L-----~VHEgP-----~~ 609 (708)
..|++-..+-+++.++...+. +|++-.+++....+.+.+.... |.. ....|+++- . ..|-.| +.
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~-pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~~ 81 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCV-PGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDATY 81 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCCc
Confidence 356666666777767665555 5999888876666655553211 111 111222210 1 123333 35
Q ss_pred cccCCcEEeeCCccc--ccCeEEeeEEEEe
Q psy3139 610 TLNINFFGVVEPEYL--DCGIKIGQVIQVV 637 (708)
Q Consensus 610 ~Le~GMV~SiEPGiY--~~GIRIEn~VlVt 637 (708)
+|++|.++.++-|.. .|--=+.-++++.
T Consensus 82 ~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG 111 (228)
T cd01089 82 TLKDGDVVKIDLGCHIDGYIAVVAHTIVVG 111 (228)
T ss_pred ccCCCCEEEEEEEEEECCEEEEEEEEEEeC
Confidence 799999999998765 3334445555553
No 81
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=21.55 E-value=1.3e+02 Score=29.78 Aligned_cols=58 Identities=19% Similarity=0.331 Sum_probs=39.8
Q ss_pred cchHhHHHHHHHHhhhCC------CCEEEEeccc---c---------chhhccccCCCCCCCcceEEEEEEeCCceEEEe
Q psy3139 261 EPWENKVQSMKDFMSSKS------VDVMVITALD---Q---------IAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYL 322 (708)
Q Consensus 261 ~~~~~Ki~rvr~~M~e~g------~DallIs~ld---n---------IaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfv 322 (708)
+.+..|++++.+..++.+ +|+++|.... + -.||+|+- .|- ..++++.+++++++
T Consensus 4 ~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~aLq~WLlGYE---fpd-----Tiiv~tk~~i~~lt 75 (163)
T PF14826_consen 4 ETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTALQTWLLGYE---FPD-----TIIVFTKKKIHFLT 75 (163)
T ss_dssp HHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHHHHHHHHSS-----SS-----EEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHHHHHHHhccc---Hhh-----hhhhhcCCEEEEEe
Confidence 467899999999999885 8999887763 3 35998653 321 34667888888877
Q ss_pred cCCC
Q psy3139 323 PKNK 326 (708)
Q Consensus 323 d~~k 326 (708)
...|
T Consensus 76 S~KK 79 (163)
T PF14826_consen 76 SKKK 79 (163)
T ss_dssp EHHH
T ss_pred CHHH
Confidence 6543
No 82
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=21.36 E-value=1.4e+02 Score=24.44 Aligned_cols=20 Identities=10% Similarity=0.488 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHhcCCcEEEE
Q psy3139 42 QRLSLLRSVMRSRGVSVYII 61 (708)
Q Consensus 42 ~rl~~lr~~m~~~~~~~~ii 61 (708)
-....++..|+++||.+++-
T Consensus 10 ~ea~~i~~~L~~~gI~~~v~ 29 (67)
T PF09413_consen 10 IEAELIKGLLEENGIPAFVK 29 (67)
T ss_dssp HHHHHHHHHHHHTT--EE--
T ss_pred HHHHHHHHHHHhCCCcEEEE
Confidence 34567999999999999985
Done!