Query psy3139
Match_columns 708
No_of_seqs 376 out of 2491
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 17:27:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ctz_A XAA-Pro aminopeptidase 100.0 9E-127 3E-131 1102.1 51.8 576 39-707 5-619 (623)
2 3q6d_A Proline dipeptidase; st 100.0 2E-63 6.7E-68 537.0 33.9 338 261-658 1-354 (356)
3 4fkc_A XAA-Pro aminopeptidase; 100.0 3E-62 1E-66 531.6 31.9 351 254-657 6-374 (377)
4 4ege_A Dipeptidase PEPE; struc 100.0 3.9E-62 1.3E-66 532.8 31.0 356 249-661 1-377 (378)
5 2zsg_A Aminopeptidase P, putat 100.0 1.3E-60 4.5E-65 514.3 35.4 334 265-658 2-357 (359)
6 1wn1_A Dipeptidase; prolidase, 100.0 1.4E-60 4.9E-65 516.1 31.5 335 265-659 1-355 (356)
7 1wy2_A XAA-Pro dipeptidase; st 100.0 7.7E-60 2.6E-64 509.5 32.4 332 264-657 5-350 (351)
8 3biq_A FACT complex subunit SP 100.0 9.6E-60 3.3E-64 525.7 27.4 363 256-669 6-454 (467)
9 1kp0_A Creatine amidinohydrola 100.0 2.1E-58 7.3E-63 504.7 28.8 350 256-659 17-397 (402)
10 4b28_A Metallopeptidase, famil 100.0 3E-57 1E-61 507.1 27.0 352 258-662 74-469 (470)
11 3cb6_A FACT complex subunit SP 100.0 8E-57 2.7E-61 498.6 30.0 360 256-664 6-441 (444)
12 1chm_A Creatine amidinohydrola 100.0 1.8E-56 6.1E-61 490.8 29.8 358 248-659 8-397 (401)
13 2v3z_A XAA-Pro aminopeptidase; 100.0 1.2E-55 4.1E-60 490.4 31.7 350 259-662 4-432 (440)
14 3ig4_A XAA-Pro aminopeptidase; 100.0 7.8E-54 2.7E-58 474.3 26.8 355 261-674 4-421 (427)
15 2iw2_A XAA-Pro dipeptidase; me 100.0 3.2E-49 1.1E-53 444.8 28.6 359 256-664 17-480 (494)
16 3rva_A Organophosphorus acid a 100.0 3.8E-48 1.3E-52 431.4 27.1 336 263-654 12-440 (451)
17 3l24_A XAA-Pro dipeptidase; PI 100.0 2.9E-46 9.9E-51 421.3 27.6 337 263-656 12-440 (517)
18 3mx6_A Methionine aminopeptida 100.0 9.6E-45 3.3E-49 376.5 23.0 218 423-658 4-258 (262)
19 3tb5_A Methionine aminopeptida 100.0 1.6E-44 5.6E-49 374.7 21.6 221 424-662 1-257 (264)
20 3tav_A Methionine aminopeptida 100.0 2.5E-44 8.7E-49 378.4 20.9 223 415-654 20-286 (286)
21 2gg2_A Methionine aminopeptida 100.0 7.3E-44 2.5E-48 369.6 22.2 218 424-658 1-255 (263)
22 3pka_A Methionine aminopeptida 100.0 7E-44 2.4E-48 375.0 21.5 212 423-652 37-284 (285)
23 1o0x_A Methionine aminopeptida 100.0 2.6E-43 9E-48 365.9 22.0 214 421-652 10-260 (262)
24 3s6b_A Methionine aminopeptida 100.0 8.8E-43 3E-47 378.1 21.2 220 423-660 99-358 (368)
25 2b3h_A Methionine aminopeptida 100.0 2.3E-42 7.9E-47 370.7 21.8 217 423-657 71-325 (329)
26 1qxy_A Methionyl aminopeptidas 100.0 2.2E-42 7.6E-47 355.8 19.3 211 427-656 3-251 (252)
27 4fuk_A Methionine aminopeptida 100.0 2.2E-41 7.7E-46 364.0 18.9 223 416-656 52-310 (337)
28 2q8k_A Proliferation-associate 100.0 3E-35 1E-39 323.3 21.9 234 420-670 12-361 (401)
29 1xgs_A Methionine aminopeptida 100.0 2.9E-33 9.9E-38 295.9 19.1 191 431-636 1-205 (295)
30 1b6a_A Methionine aminopeptida 100.0 9.4E-33 3.2E-37 308.0 17.3 198 423-633 156-378 (478)
31 2nw5_A Methionine aminopeptida 100.0 6.7E-31 2.3E-35 284.7 14.8 192 426-630 40-257 (360)
32 3fm3_A Methionine aminopeptida 99.9 4.8E-25 1.6E-29 238.9 17.4 191 421-624 33-247 (358)
33 3qoc_A Putative metallopeptida 99.9 3.8E-22 1.3E-26 187.2 10.4 127 38-240 8-135 (135)
34 3ovk_A Aminopeptidase P, XAA-P 99.8 6.7E-20 2.3E-24 170.7 11.3 124 39-240 7-132 (132)
35 3il0_A Aminopeptidase P; XAA-P 99.8 7.3E-20 2.5E-24 169.1 10.5 124 39-240 3-128 (131)
36 3pn9_A Proline dipeptidase; st 99.7 8.1E-18 2.8E-22 156.5 10.3 126 40-240 3-135 (138)
37 3i7m_A XAA-Pro dipeptidase; st 99.7 2.9E-17 1E-21 153.8 10.7 124 43-240 5-138 (140)
38 3ooo_A Proline dipeptidase; st 99.7 7.2E-17 2.5E-21 149.7 12.2 123 42-240 3-132 (132)
39 3o5v_A X-Pro dipeptidase; crea 99.7 7.4E-17 2.5E-21 149.8 10.8 124 41-240 2-132 (132)
40 3il0_A Aminopeptidase P; XAA-P 99.5 4.2E-14 1.4E-18 130.4 11.6 126 263-428 4-131 (131)
41 3pn9_A Proline dipeptidase; st 99.5 2.1E-14 7.2E-19 133.4 8.4 129 263-428 3-138 (138)
42 3q6d_A Proline dipeptidase; st 99.5 6.9E-14 2.4E-18 150.4 10.0 127 38-241 1-129 (356)
43 3biq_A FACT complex subunit SP 99.4 1.4E-12 4.9E-17 145.2 12.4 180 38-276 11-206 (467)
44 1kp0_A Creatine amidinohydrola 99.4 5.5E-13 1.9E-17 145.5 8.3 161 38-276 22-186 (402)
45 2zsg_A Aminopeptidase P, putat 99.3 4.9E-12 1.7E-16 135.8 10.6 129 42-241 2-132 (359)
46 3qoc_A Putative metallopeptida 99.3 1.4E-11 4.9E-16 115.1 9.7 129 257-425 4-135 (135)
47 3ovk_A Aminopeptidase P, XAA-P 99.2 3.6E-11 1.2E-15 111.6 11.6 123 263-425 8-132 (132)
48 3o5v_A X-Pro dipeptidase; crea 99.1 2E-10 6.7E-15 106.3 9.7 124 264-425 2-132 (132)
49 3i7m_A XAA-Pro dipeptidase; st 99.1 3.3E-10 1.1E-14 105.7 10.3 125 266-426 5-139 (140)
50 3ooo_A Proline dipeptidase; st 99.1 4.6E-10 1.6E-14 103.7 9.6 123 265-425 3-132 (132)
51 4ege_A Dipeptidase PEPE; struc 99.0 2.8E-09 9.5E-14 116.0 13.3 130 38-241 13-149 (378)
52 3cb6_A FACT complex subunit SP 98.9 1.3E-08 4.4E-13 112.4 13.8 143 39-240 12-175 (444)
53 4b6a_t Probable metalloproteas 98.7 1.1E-07 3.8E-12 107.9 15.4 175 421-600 34-271 (614)
54 4fkc_A XAA-Pro aminopeptidase; 98.7 4.5E-08 1.6E-12 105.9 11.5 136 34-241 9-149 (377)
55 1wy2_A XAA-Pro dipeptidase; st 98.6 5.2E-08 1.8E-12 104.8 9.4 120 41-241 5-126 (351)
56 3ctz_A XAA-Pro aminopeptidase 98.6 2E-08 6.7E-13 116.2 4.6 152 263-456 6-187 (623)
57 4b28_A Metallopeptidase, famil 98.6 2.5E-08 8.5E-13 111.7 5.3 142 39-241 78-228 (470)
58 1chm_A Creatine amidinohydrola 98.4 8.3E-07 2.8E-11 97.0 10.1 132 38-241 21-156 (401)
59 1wn1_A Dipeptidase; prolidase, 98.4 6.9E-07 2.4E-11 96.2 8.8 124 42-241 1-130 (356)
60 3ig4_A XAA-Pro aminopeptidase; 97.6 3.5E-05 1.2E-09 85.2 4.6 140 40-241 6-170 (427)
61 2v3z_A XAA-Pro aminopeptidase; 97.5 0.00011 3.7E-09 81.3 6.7 73 39-125 7-84 (440)
62 2iw2_A XAA-Pro dipeptidase; me 91.7 0.22 7.6E-06 55.7 6.8 74 38-122 22-101 (494)
63 4fuk_A Methionine aminopeptida 59.5 23 0.00079 37.3 8.4 77 546-624 72-157 (337)
64 3rva_A Organophosphorus acid a 56.5 21 0.00073 39.3 7.7 69 40-119 12-82 (451)
65 3tb5_A Methionine aminopeptida 52.9 35 0.0012 34.2 8.1 76 547-624 14-98 (264)
66 3s6b_A Methionine aminopeptida 48.4 54 0.0018 35.2 9.1 76 547-624 113-197 (368)
67 2b3h_A Methionine aminopeptida 46.2 68 0.0023 33.7 9.3 80 543-624 77-169 (329)
68 3l24_A XAA-Pro dipeptidase; PI 44.8 47 0.0016 37.3 8.2 69 40-119 12-82 (517)
69 3fm3_A Methionine aminopeptida 38.6 40 0.0014 35.9 6.2 77 546-624 48-134 (358)
70 3mx6_A Methionine aminopeptida 38.1 1.1E+02 0.0037 30.6 9.0 75 547-623 18-101 (262)
71 1xgs_A Methionine aminopeptida 38.0 72 0.0025 32.8 7.8 76 545-624 5-86 (295)
72 1qxy_A Methionyl aminopeptidas 37.0 1.4E+02 0.0048 29.4 9.6 75 547-623 13-96 (252)
73 3pka_A Methionine aminopeptida 36.8 1.3E+02 0.0044 30.6 9.5 79 543-623 43-134 (285)
74 3tav_A Methionine aminopeptida 29.1 2.1E+02 0.0071 29.0 9.5 75 547-623 44-128 (286)
75 2gg2_A Methionine aminopeptida 28.2 1.8E+02 0.0062 28.8 8.8 73 549-623 16-99 (263)
76 1o0x_A Methionine aminopeptida 26.8 1.9E+02 0.0064 28.8 8.6 79 543-623 18-110 (262)
77 2z9m_A Response regulator YYCF 23.9 65 0.0022 28.3 4.0 58 208-279 36-93 (120)
78 3q9v_A DNA-binding response re 23.2 87 0.003 28.3 4.8 59 208-280 60-118 (133)
79 3twe_A Alpha4H; unknown functi 23.0 37 0.0013 22.2 1.5 15 39-53 12-26 (27)
80 1ynf_A Succinylarginine dihydr 21.7 96 0.0033 33.8 5.3 50 419-470 374-423 (458)
81 1opc_A OMPR, OMPRC; transcript 20.3 1.2E+02 0.004 26.0 4.8 58 208-279 31-88 (110)
82 3zq7_A KDP operon transcriptio 20.2 95 0.0033 26.1 4.2 57 208-278 28-84 (102)
No 1
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=9.2e-127 Score=1102.08 Aligned_cols=576 Identities=31% Similarity=0.576 Sum_probs=535.3
Q ss_pred CHHHHHHHHHHHHHhcC-----CcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCC
Q psy3139 39 DVNQRLSLLRSVMRSRG-----VSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQT 113 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~-----~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~ 113 (708)
++.+||++||+.|++++ +||||||++|+||| |||+ ++++|++||||||||+|++|||++
T Consensus 5 ~~~~Rl~~LR~~m~~~~~~~~~lda~lv~~~D~h~s---------ey~~-------~~~~~~~ylsGFtGSaG~~vVt~~ 68 (623)
T 3ctz_A 5 VTSELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQS---------EYIA-------PCDCRRAFVSGFDGSAGTAIITEE 68 (623)
T ss_dssp CCHHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCC---------SSCC-------GGGCHHHHHHSCCSSCCEEEEESS
T ss_pred CHHHHHHHHHHHHHhcCCCCCceeEEEECCCCcccc---------cccc-------chhccceeccCcCCCceEEEEecC
Confidence 45789999999999999 99999999999999 9999 999999999999999999999999
Q ss_pred ccEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHH
Q psy3139 114 TAVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIA 193 (708)
Q Consensus 114 ~a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (708)
+|+|||||||++||++|++ .+|++++. |.++.|++.+||+
T Consensus 69 ~a~l~tDgRY~~QA~~ql~-~~~~l~~~---------------------------------------~~~~~~~~~~~l~ 108 (623)
T 3ctz_A 69 HAAMWTDGRYFLQAAKQMD-SNWTLMKM---------------------------------------GLKDTPTQEDWLV 108 (623)
T ss_dssp CEEEEECGGGHHHHHHHBC-TTEEEEET---------------------------------------TSTTCCCHHHHHH
T ss_pred eeEEEECcHHHHHHHHhcC-CceEEEEe---------------------------------------cCCCCccHHHHHH
Confidence 9999999999999999997 46999986 4445789999999
Q ss_pred HhccCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHH
Q psy3139 194 THAKYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDF 273 (708)
Q Consensus 194 ~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~ 273 (708)
++++.+++||||+..+|++.|++|++.|...+++|+++..||||.+|.|||..|..|++.|+.+|+|+++.+|++++|+.
T Consensus 109 ~~l~~~~~vG~d~~~~s~~~~~~l~~~l~~~~~~lv~~~~~lvd~iw~~Rp~k~~~e~~~~~~~~ag~~~~~rl~~lr~~ 188 (623)
T 3ctz_A 109 SVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLK 188 (623)
T ss_dssp HHCCTTCEEEECGGGSBHHHHHHHHHHHHHTTCEEEECSSCHHHHHCTTCCCCCCCCCEECCHHHHSSCHHHHHHHHHHH
T ss_pred HhCcCCCEEEECcccccHHHHHHHHHHHHhcCCEEEecCCCcHHHHhhcCCCCCchhhhhcchhhcChhHHHHHHHHHHH
Confidence 99999999999999999999999999998888999998679999999999999999999999999999999999999999
Q ss_pred hhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcH-HHHhhcC---------CcEEEeC
Q psy3139 274 MSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITP-VLRNYLG---------DIVIKPY 343 (708)
Q Consensus 274 M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~-~v~~~l~---------~v~v~~Y 343 (708)
|+++++|++||++++||+||||+||+|++|+|++++|++|+.++++||+++.++.. ++.+++. ++++++|
T Consensus 189 m~e~~~dallit~~~~i~yl~~~~G~dv~~~pi~~~~llv~~~~~~l~v~~~~~~~~~~~~~l~~~~~~p~~~~v~v~~y 268 (623)
T 3ctz_A 189 MAERNVMWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGDRIDAPSVKEHLLLDLGLEAEYRIQVHPY 268 (623)
T ss_dssp HHTTTEEEEEECCHHHHHHHHTEECCSSSSSCCCSCEEEEESSCEEEECCSGGGGSHHHHHHTTTTSCCCGGGCEEEECG
T ss_pred HHHcCCCEEEECCHHHHHHHhCCCCccCCCCcceeEEEEEecCCcEEEEechhcCHHHHHHHHhhccccccCCceEEEEh
Confidence 99999999999999999999999999999999999999999999999999877765 6777762 4889999
Q ss_pred ccHhhhhhhhhhC---CCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCC-eeeeCCc
Q psy3139 344 DLVWTDLPEFVRT---GKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPL-KLLTGPS 419 (708)
Q Consensus 344 ~~~~~~L~~l~~~---~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~-~~v~~~~ 419 (708)
.++.+.|+.+... .++|++|+..++.+++. ++.. ++++..+
T Consensus 269 ~~~~~~l~~l~~~~~~~~~i~id~~~~~~l~~~-----------------------------------l~~~~~~v~~~~ 313 (623)
T 3ctz_A 269 KSILSELKALCADLSPREKVWVSDKASYAVSET-----------------------------------IPKDHRCCMPYT 313 (623)
T ss_dssp GGHHHHHHHHHHTCCTTCEEEEETTSBHHHHHH-----------------------------------SCGGGEEEESSC
T ss_pred HHHHHHHHHHHhcccCCeEEEECchhhHHHHHh-----------------------------------ccccceEEeccc
Confidence 9999988887532 36899998866766665 3333 6788889
Q ss_pred hhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCC
Q psy3139 420 PVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGI-ESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHA 498 (708)
Q Consensus 420 pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i-~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~Na 498 (708)
|+..+|++||+.||++||+|++++++|++++++|+++.+ ++| +||.+++++++.+|.++.++.++||++|+++|+|+
T Consensus 314 ~i~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g--~tE~el~~~l~~~~~~~~g~~~~sf~~iv~~G~n~ 391 (623)
T 3ctz_A 314 PICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGG--VTEISAADKAEEFRRQQADFVDLSFPTISSTGPTG 391 (623)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTC--CBHHHHHHHHHHHHHTSTTEEEESSCCEEEEGGGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcHHHHHHHHHHHHHhcCCCcCCCCCceeeecCcc
Confidence 999999999999999999999999999999999999888 677 89999999999888777777889999999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYL 577 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~ 577 (708)
+++||.|+.+++++|++| ++++|+|++|.+|+||+||||++|+||++|+++|++|++++++++.+++|+|+++.++|.+
T Consensus 392 a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~~s~~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ 471 (623)
T 3ctz_A 392 AIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSF 471 (623)
T ss_dssp GCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGG
T ss_pred ccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHH
Confidence 999999987778999999 9999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHcCCCCCCCCceecCCCCccccCCC---------ccccCCcEEeeCCccc---ccCeEEeeEEEEeecc-----
Q psy3139 578 LEQPLLALALDYRPQRVHSIGEFLLVQEDFN---------STLNINFFGVVEPEYL---DCGIKIGQVIQVVPAY----- 640 (708)
Q Consensus 578 AR~~L~~~G~~y~HGtGHGVG~~L~VHEgP~---------~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~----- 640 (708)
||+++|+.|++|.||||||||+||+|||+|. .+|+||||||+|||+| .+||||||+|+||++.
T Consensus 472 ar~~l~~~G~~~~h~~GHgvG~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd~vlVt~~~~~~~~ 551 (623)
T 3ctz_A 472 ARSALWDSGLDYLHGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVVPVKTKYNF 551 (623)
T ss_dssp GTHHHHHTTCCCSSCSEEBCCSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEEECBEEEEEEEECCSSCC
T ss_pred HHHHHHHhCCCCCCCccccCCCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECCceEEEEeeEEEEecCCccccc
Confidence 9999999999999999999999999999993 3699999999999999 7899999999999871
Q ss_pred -cccccceeeccCCCccccccccccCCHHHHHHHHHHHHHHHHHHcccccCCCcHHHHHHHHhcccCC
Q psy3139 641 -RERYMTMEVRSLFPFESRLIDTSQLEPHEIRWINEFHATVRYVIGEQLVGRGLHAEYRTLIKKTDPL 707 (708)
Q Consensus 641 -~~~~lgfE~LT~vP~~~~lId~~~Lt~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~wL~~~t~~~ 707 (708)
+++|||||+||.+|++.++|+.+|||++|++|||+||++||++|+|+|+++++.++++||+++|+||
T Consensus 552 ~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln~yh~~v~~~~~p~l~~~~~~~~~~wl~~~t~~~ 619 (623)
T 3ctz_A 552 NNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLNNYHLTCRDVIGKELQKQGRQEALEWLIRETQPI 619 (623)
T ss_dssp SSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCCC
T ss_pred ccccccCCceeeeCCccHHHHHHHhCCHHHHHHHHHHHHHHHHHHhHhhCCCCcHHHHHHHHHHhHhh
Confidence 2689999999999999999999999999999999999999999999998655567899999999998
No 2
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=2e-63 Score=537.01 Aligned_cols=338 Identities=16% Similarity=0.197 Sum_probs=293.7
Q ss_pred cchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhcCCcEE
Q psy3139 261 EPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYLGDIVI 340 (708)
Q Consensus 261 ~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l~~v~v 340 (708)
+++.+|++++|+.|+++++|+++|++++|++||||++|++ +|++|+.+++.||+|.+.. .+++..+.++++
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~ni~YLtGf~g~~--------~~llvt~~~~~l~~d~r~~-~~a~~~~~~~~v 71 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTA--------GVVLISKKRAQFITDFRYV-EQASKQAVGYEI 71 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHHHHHHHHCCCSSS--------CEEEEESSCEEEEECGGGH-HHHHHHSTTSEE
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChhhceEccCCCCCC--------eEEEEECCCeEEEEChhhH-HHHHhhCCCCEE
Confidence 4789999999999999999999999999999999999976 5789999999999987443 345555556677
Q ss_pred EeC-ccHhhhhhhhhh--CCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeee
Q psy3139 341 KPY-DLVWTDLPEFVR--TGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLT 416 (708)
Q Consensus 341 ~~Y-~~~~~~L~~l~~--~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~ 416 (708)
..| ++..+.|.++.. ..++|++|++ .++..++.+++ .+++ ++++
T Consensus 72 ~~~~~~~~~~l~~~l~~~~~~~igve~~~~~~~~~~~l~~-------------------------------~~~~-~~~~ 119 (356)
T 3q6d_A 72 VQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKE-------------------------------AIDA-EFIP 119 (356)
T ss_dssp EECSSCHHHHHHHHHHHHTCSEEEEETTTSBHHHHHHHHH-------------------------------HCCS-EEEE
T ss_pred EEeCCCHHHHHHHHHHhcCCceEEEcCccCCHHHHHHHhh-------------------------------hccc-ceec
Confidence 765 344444443321 2578999987 89999888764 2566 8889
Q ss_pred CCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccC
Q psy3139 417 GPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGT 496 (708)
Q Consensus 417 ~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~ 496 (708)
..+++..+|++||+.||+.||+|+.+.+.++.+++ +.+++| +||.|+++.++..+.+. ++.+++|++|+++|+
T Consensus 120 ~~~~~~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~----~~i~~G--~te~e~~~~~~~~~~~~-g~~~~~f~~iv~~g~ 192 (356)
T 3q6d_A 120 TSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHIL----SFIRPG--VSEIEVSNELEFFMRKQ-GATSSSFDIIVASGL 192 (356)
T ss_dssp ECSHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHT----TTCCTT--CBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGG
T ss_pred chhhhhhhccCCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHC-CCCcCCCCCEEEEcC
Confidence 99999999999999999999999988877765544 567788 89999999999876554 456789999999999
Q ss_pred CCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Q psy3139 497 HATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLE 575 (708)
Q Consensus 497 NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD 575 (708)
|+++|||.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++| |+++.++|
T Consensus 193 n~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~i~ 268 (356)
T 3q6d_A 193 RSALPHGVAS---EKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKA-GLTGREAD 268 (356)
T ss_dssp GGGCTTCBCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHH
T ss_pred ccccCCCCCC---CcccCCCCEEEEEEeEEECCEEeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHH
Confidence 9999999985 7899999 99999999999999999999999999999999999999999999888765 99999999
Q ss_pred HHHHHHHHHcCC--CCCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeecccccc
Q psy3139 576 YLLEQPLLALAL--DYRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYRERY 644 (708)
Q Consensus 576 ~~AR~~L~~~G~--~y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~~~~ 644 (708)
.++|+.+|+.|+ .|.|++||||| |++||+| +.+|+||||||+|||+| .+||||||+|+||++
T Consensus 269 ~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt~~----- 341 (356)
T 3q6d_A 269 ALTRDYITEKGYGEYFGHSTGHGIG--LEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSE----- 341 (356)
T ss_dssp HHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEECSS-----
T ss_pred HHHHHHHHHcCCcccCCCCCcccCC--CCcCcCCCCCCCCCCCcCCCCEEEECCEEEECCCCeEEEccEEEEeCC-----
Confidence 999999999998 68999999999 7999998 36899999999999999 689999999999999
Q ss_pred cceeeccCCCcccc
Q psy3139 645 MTMEVRSLFPFESR 658 (708)
Q Consensus 645 lgfE~LT~vP~~~~ 658 (708)
|+|.||..|.++-
T Consensus 342 -G~e~Lt~~p~~l~ 354 (356)
T 3q6d_A 342 -GNEVITKSPKELI 354 (356)
T ss_dssp -SEEECCCSCCSCC
T ss_pred -cceeCCCCCcceE
Confidence 9999999998754
No 3
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=3e-62 Score=531.64 Aligned_cols=351 Identities=15% Similarity=0.207 Sum_probs=292.5
Q ss_pred cccccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHh
Q psy3139 254 HPLEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRN 333 (708)
Q Consensus 254 ~~~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~ 333 (708)
.+..|.-.|+++|++++|+.|+++|+|++||++++|++||||+++.+....|+ +++++.++..+++.+......+ +
T Consensus 6 ~~~~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~ni~YLTG~~~~~~~~~~~---~lvv~~~g~~~~~~~~~~~~~~-~ 81 (377)
T 4fkc_A 6 HHHHHGSMDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERLF---VLILPSEGLLTAIAPRLYEKEL-E 81 (377)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHSCCCCCCSSSCC---EEEEESSSCCEEEEEGGGHHHH-T
T ss_pred cCCCcchHHHHHHHHHHHHHHHHCCCCEEEECCChhheeecCCCCCCCCcceE---EEEEcCCCcEEEEeccchHHHH-H
Confidence 35678889999999999999999999999999999999999999877555554 3567766544444332222222 2
Q ss_pred hcCC--cEEEeC----ccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCcccccccccccccccccccc
Q psy3139 334 YLGD--IVIKPY----DLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSID 407 (708)
Q Consensus 334 ~l~~--v~v~~Y----~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~ 407 (708)
.... +.+.+. +.+.+.|+++...+++|++|...+...+..+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~d~~~~~~~~~~l~~------------------------------- 130 (377)
T 4fkc_A 82 EFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDDTMPVGVFLKAKD------------------------------- 130 (377)
T ss_dssp TCSSEEEEECTTSCHHHHHHHHHHHHSCSSCEEEECTTSCHHHHHHTHH-------------------------------
T ss_pred hcCCCEEEeccccCHHHHHHHHHHHhhhccceeeeeccccHHHHHHHHh-------------------------------
Confidence 2222 222222 233445555544568999998888877777653
Q ss_pred CCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCC
Q psy3139 408 EVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNS 487 (708)
Q Consensus 408 ~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~S 487 (708)
.+++.++++..+++..+|++||++||+.||+|+.+++.++.+++ +.+++| +||.|++++++..+....++.+++
T Consensus 131 ~~~~~~~~d~~~~i~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~----~~~~~G--~tE~el~~~~~~~~~~~~g~~~~~ 204 (377)
T 4fkc_A 131 IFDKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFI----EGKLEG--KSERELANRIEYMIKNEFGADDVS 204 (377)
T ss_dssp HHTTSEEEESHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHT----TSCCTT--CBHHHHHHHHHHHHHTSTTCCEES
T ss_pred hCCCCeEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhh----hccCCC--ccHHHHHHHHhhhhhhccCCCCcc
Confidence 25777899999999999999999999999999999888877665 456778 899999999988776666677889
Q ss_pred CCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q psy3139 488 FPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFL 566 (708)
Q Consensus 488 F~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp 566 (708)
|++|+++|+|++++||.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++|+++|+.|++++.++..++ +
T Consensus 205 f~~iv~~G~n~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~-~ 280 (377)
T 4fkc_A 205 FEPIVASGPNGANPHHRPS---HRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKV-A 280 (377)
T ss_dssp SCCEEEEGGGGGCTTCCCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCTHHHHHHHHHHHHHHHHHHHC-B
T ss_pred cCccccccccccccccccc---cccccccccccccccccccCcccccceeEEEecCCHHHHHhhhhhHHHHHHHHHhh-c
Confidence 9999999999999999985 7899999 999999999999999999999999999999999999999998887665 5
Q ss_pred CCCchHHHHHHHHHHHHHcCC--CCCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEE
Q psy3139 567 PGSSLHRLEYLLEQPLLALAL--DYRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQ 635 (708)
Q Consensus 567 ~G~~g~~lD~~AR~~L~~~G~--~y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~Vl 635 (708)
||+++.++|.++|+.+++.|+ .|.|++||||| |++||+| +.+|+||||||+|||+| .+||||||+|+
T Consensus 281 pG~~~~~i~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~hE~P~i~~~~~~~L~~Gmv~tiEPgiy~~g~~GvriEd~v~ 358 (377)
T 4fkc_A 281 EGIPAEVVDATARGIISKYGYGEYFIHRTGHGLG--IDVHEEPYISPGNKKILKDGMVFTIEPGIYLQGKFGVRIEDDVA 358 (377)
T ss_dssp TTCBHHHHHHHHHHHHHHTTCTTTCCSCSEEECS--SSSSEEEEECSSCCCBCCTTCEEEECCEEEETTTEEEECBEEEE
T ss_pred CCcchhhhHHHHHHHHHHhcccccCCCCCeEeCC--CccccCCcccCCCCCEeCCCCEEEECCeeEECCccEEEEccEEE
Confidence 699999999999999999998 48999999999 7999998 36899999999999999 78999999999
Q ss_pred EeecccccccceeeccCCCccc
Q psy3139 636 VVPAYRERYMTMEVRSLFPFES 657 (708)
Q Consensus 636 Vte~~~~~~lgfE~LT~vP~~~ 657 (708)
||++ |+|.||.+|.++
T Consensus 359 Vt~~------g~e~Lt~~p~el 374 (377)
T 4fkc_A 359 LVDK------KGIRLTNADREL 374 (377)
T ss_dssp EETT------EEEESCCSCCSC
T ss_pred EECC------CcEECCCCCCCe
Confidence 9999 999999998654
No 4
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=3.9e-62 Score=532.75 Aligned_cols=356 Identities=15% Similarity=0.166 Sum_probs=297.2
Q ss_pred CcceecccccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCC
Q psy3139 249 SVVFIHPLEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKI 327 (708)
Q Consensus 249 ~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl 327 (708)
.|+++||..|+++++++|++++|+.|+++++|+++|++++|++||||+++.+.+. .++++|+.+ +++||++....
T Consensus 1 ~~~~~~~~~~~~~e~~~R~~~l~~~m~~~g~da~li~~~~ni~YltG~~~~~~~r----~~~l~v~~~g~~~l~~~~~~~ 76 (378)
T 4ege_A 1 GPGSMDSGRFDTAVYARRLAAAAAATEQAGLAGLVITPGYDLRYLIGSRADTFER----LTALVLPASGVPTIVLPRLEL 76 (378)
T ss_dssp -------CCCCHHHHHHHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCCCSSS----CCEEEEESSSCCEEEEEGGGG
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHHcCCCEEEECCcchhHHhhCCCCCCCcc----eEEEEEEeCCcEEEEEChhhH
Confidence 3899999999999999999999999999999999999999999999999976442 256788866 68899975332
Q ss_pred cHHHHhh-cC--CcEEEeCcc---HhhhhhhhhhC-CCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccc
Q psy3139 328 TPVLRNY-LG--DIVIKPYDL---VWTDLPEFVRT-GKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTA 400 (708)
Q Consensus 328 ~~~v~~~-l~--~v~v~~Y~~---~~~~L~~l~~~-~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a 400 (708)
..++.. +. ++.+.+|.+ ..+.+.++... .++|++|+..+...+..|++
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~igve~~~~~~~~~~l~~------------------------ 131 (378)
T 4ege_A 77 -ASLKESAASDLGVCVRDWVDGDDPYQLVAVALGGAPAATAVTDSMPALHLLPLAD------------------------ 131 (378)
T ss_dssp -GGGGTSSTTTTTCEEEEECTTSCHHHHHHHHTTSSSCCEEECTTCCHHHHHHHHH------------------------
T ss_pred -HHHHhcccCCCCeEEEEecCCCCHHHHHHHHHhcCCCEEEEcCCCcHHHHHHHHH------------------------
Confidence 223322 32 367777643 34445544322 25899997688877777663
Q ss_pred cccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhc
Q psy3139 401 VDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEH 480 (708)
Q Consensus 401 ~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~ 480 (708)
.+ +.++++..+++..+|++||++||+.||+|+.+++.++.+++.+ +++| +||.|+++.+++.+.+.
T Consensus 132 -------~~-~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~----i~~G--~tE~el~~~~~~~~~~~ 197 (378)
T 4ege_A 132 -------AL-GVLPVLATDVLRQLRMVKEAAEVDALAKAGAAIDRVHARVPAF----LVPG--RTEAQVAADIAEAIVAE 197 (378)
T ss_dssp -------HH-TSCCEESHHHHHHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHH----CCTT--CBHHHHHHHHHHHHHHT
T ss_pred -------Hc-CCeEEEcHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHh----ccCC--CCHHHHHHHHHHHHHHc
Confidence 14 4578889999999999999999999999999998888776654 5568 89999999999876654
Q ss_pred CCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeeccc-CCcccceeeEEecCCCCHHHHHHHHHHHHHHH
Q psy3139 481 WSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQY-LDGTTKVNAILHCGIPTPLQRSVYTAILKGLI 558 (708)
Q Consensus 481 ~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY-~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~i 558 (708)
+ ..+.+| +|+++|+|+++|||.|+ +++|++| ++++|+|++| .+|++|+|||+++|+|+++++++|+.|++++.
T Consensus 198 G-~~~~~f-~iv~sG~n~~~~H~~~~---~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~ 272 (378)
T 4ege_A 198 G-HSAVAF-VIVGSGPHGADPHHGYS---DRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGDPSPDVAQQYSALQRAQR 272 (378)
T ss_dssp T-CSEEEE-EEEEEGGGGGCTTCCCC---SCBCCTTCEEEEEEEEEETTTEECCEEEEEEESCCCHHHHHHHHHHHHHHH
T ss_pred C-CCCCCe-eEEEeeCCCCccCCCCC---CCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 3 355789 99999999999999985 7899999 9999999999 89999999999999999999999999999999
Q ss_pred HHHHhcCCCCCchHHHHHHHHHHHHHcCC--CCCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccC
Q psy3139 559 ALVTTQFLPGSSLHRLEYLLEQPLLALAL--DYRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCG 627 (708)
Q Consensus 559 al~~a~fp~G~~g~~lD~~AR~~L~~~G~--~y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~G 627 (708)
+++.+++| |+++.++|.++|+.+++.|+ .|.|++||||| |++||.| +.+|+||||||+|||+| .+|
T Consensus 273 ~~~~~~~p-G~~~~~v~~~~~~~~~~~G~~~~~~h~~GHgiG--l~~hE~P~i~~~~~~~L~~Gmv~tiEPgiy~~g~~g 349 (378)
T 4ege_A 273 AAVDAVRP-GVTAAQVDAAARDVLADAGLAEYFVHRTGHGIG--LCVHEEPYIVAGNELPLVAGMAFSIEPGIYFPGRWG 349 (378)
T ss_dssp HHHHHCCT-TCBHHHHHHHHHHHHHHTTCGGGCCSCSEEECS--SSSSEEEEECTTCCCBCCTTBEEEECCEEEETTTEE
T ss_pred HHHHHcCC-CCcHHHHHHHHHHHHHHcCCCCcCCCCCcccCC--CCcCCCCccCCCCCCccCCCCEEEECCEEEeCCccE
Confidence 99988765 99999999999999999999 58999999999 7999998 36899999999999999 689
Q ss_pred eEEeeEEEEeecccccccceeeccCCCccccccc
Q psy3139 628 IKIGQVIQVVPAYRERYMTMEVRSLFPFESRLID 661 (708)
Q Consensus 628 IRIEn~VlVte~~~~~~lgfE~LT~vP~~~~lId 661 (708)
|||||+|+||++ |+|.||..|.++-.|+
T Consensus 350 vriEd~v~Vt~~------G~e~Lt~~p~~l~~~~ 377 (378)
T 4ege_A 350 ARIEDIVVVTEN------GALSVNNRPHELMVVP 377 (378)
T ss_dssp EECBEEEEEETT------EEEESCCSCCSCEEEC
T ss_pred EEEeeEEEEeCC------cCeECCCCCCccEEcc
Confidence 999999999999 9999999998876654
No 5
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=1.3e-60 Score=514.34 Aligned_cols=334 Identities=16% Similarity=0.230 Sum_probs=287.6
Q ss_pred hHHHHHHHHhhhCCCCEEEEeccccc-----hhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhcCCcE
Q psy3139 265 NKVQSMKDFMSSKSVDVMVITALDQI-----AWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYLGDIV 339 (708)
Q Consensus 265 ~Ki~rvr~~M~e~g~DallIs~ldnI-----aWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l~~v~ 339 (708)
+|++++|+.|+++++|++++++++|+ +||||++|++ ++++|+.++..||++...... +... .+++
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni~~~~~~YLtGf~~~~--------~~llI~~~~~~L~~d~r~~~~-a~~~-~~~~ 71 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSF--------SIILISENTRLLITDSRYTVQ-AKQE-TDFE 71 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTTTHHHHHHHHCCCSSC--------EEEEEETTEEEEEECTTTHHH-HHHH-CCSE
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHcccccCeeEeccCCCC--------EEEEEECCCCEEEECcccHHH-HHhC-CCCE
Confidence 58999999999999999999999999 9999998764 688999999999999866543 3333 4577
Q ss_pred EEeC-cc-Hhhhhhhhhh--CCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCee
Q psy3139 340 IKPY-DL-VWTDLPEFVR--TGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKL 414 (708)
Q Consensus 340 v~~Y-~~-~~~~L~~l~~--~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~ 414 (708)
+.+| .+ ..+.|.++.. ..++|++|++ .+...++.+++ .+++.++
T Consensus 72 v~~~~~~~~~~~l~~~L~~~~~~~vgvd~~~~~~~~~~~l~~-------------------------------~l~~~~~ 120 (359)
T 2zsg_A 72 VREVKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISS-------------------------------AFGDRKF 120 (359)
T ss_dssp EEEC---CCHHHHHHHHHHTTCCEEEECGGGSBHHHHHHHHH-------------------------------HTTTCEE
T ss_pred EEEecCcchHHHHHHHHHhcCCCEEEEeCCcCCHHHHHHHHh-------------------------------hCCCcEE
Confidence 7777 33 3344444322 2468999987 77777777653 1444578
Q ss_pred eeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q psy3139 415 LTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAH 494 (708)
Q Consensus 415 v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~ 494 (708)
++..+++..+|++||+.||+.||+|+.+++.++.+++. .+++| +||.|+++.+++...+. +..+++|++|+++
T Consensus 121 v~~~~~i~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~----~~~~G--~te~e~~~~~~~~~~~~-g~~~~~f~~iv~~ 193 (359)
T 2zsg_A 121 IGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQ----QIRAG--MTEKEIAALLEYTMRKE-GAEGVAFDTIVAS 193 (359)
T ss_dssp EECHHHHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHT----TCCTT--CBHHHHHHHHHHHHHHT-TCSEESSCCEEEE
T ss_pred EEChhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHH----hccCC--CCHHHHHHHHHHHHHHc-CCCCCCCCCEEEE
Confidence 88889999999999999999999999999888776664 45678 89999999998865544 3456899999999
Q ss_pred cCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHH
Q psy3139 495 GTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHR 573 (708)
Q Consensus 495 G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~ 573 (708)
|+|+++|||.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++ ||+++.+
T Consensus 194 g~~~~~~h~~~~---~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~-pG~~~~~ 269 (359)
T 2zsg_A 194 GCRSALPHGKAS---DKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAK-AGVTGKL 269 (359)
T ss_dssp GGGGGSTTCCCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCC-TTCBHHH
T ss_pred ccccccccCCCC---CcccCCCCEEEEEEeEEECCEEEeeeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcc-CCCCHHH
Confidence 999999999985 7899999 9999999999999999999999999999999999999999999988875 5999999
Q ss_pred HHHHHHHHHHHcCC--CCCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeecccc
Q psy3139 574 LEYLLEQPLLALAL--DYRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYRE 642 (708)
Q Consensus 574 lD~~AR~~L~~~G~--~y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~~ 642 (708)
+|.++|+.+++.|+ +|.|++||||| |++||+| +.+|+||||||+|||+| .+||||||+|+||++
T Consensus 270 v~~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~~~~~~~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt~~--- 344 (359)
T 2zsg_A 270 LDSVAREFIREKGYGEFFGHSLGHGIG--LEVHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQ--- 344 (359)
T ss_dssp HHHHHHHHHHHTTCGGGBCSCSEEECS--SSSSEEEEESTTCCCBCCTTBEEEECCEEEETTTEEEECBEEEEEETT---
T ss_pred HHHHHHHHHHHcCCcccCCCCCccccC--cccCCCCCcCCCCCCCcCCCCEEEECCEEEECCCcEEEEeeEEEEcCC---
Confidence 99999999999999 68999999999 7999999 36899999999999999 579999999999999
Q ss_pred cccceeeccCCCcccc
Q psy3139 643 RYMTMEVRSLFPFESR 658 (708)
Q Consensus 643 ~~lgfE~LT~vP~~~~ 658 (708)
|+|.||.+|.+..
T Consensus 345 ---g~e~Lt~~~~~l~ 357 (359)
T 2zsg_A 345 ---GCEILTTLPRSIF 357 (359)
T ss_dssp ---EEEECCCSCCSCE
T ss_pred ---cceECCCCCccce
Confidence 9999999998764
No 6
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=1.4e-60 Score=516.07 Aligned_cols=335 Identities=16% Similarity=0.147 Sum_probs=284.3
Q ss_pred hHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCc-eEEEecCCCCcHHHHhhcCCcEEEeC
Q psy3139 265 NKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSL-CVLYLPKNKITPVLRNYLGDIVIKPY 343 (708)
Q Consensus 265 ~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~-~~Lfvd~~kl~~~v~~~l~~v~v~~Y 343 (708)
+|++++|+.|+++++|++++++++|++||||+++. +++.+ .++++++.++ ++||++..+... ++. +++.+|
T Consensus 1 ~R~~~l~~~m~~~~~d~~li~~~~n~~yltG~~~~-~~~~~--~~~l~i~~~~~~~l~~~~~~~~~-~~~----~~v~~~ 72 (356)
T 1wn1_A 1 MRLEKFIHLLGERGFDGALISPGTNLYYLTGLRLH-EVGER--LAILAVSAEGDYRFLAPSLYENV-VNN----FPATFW 72 (356)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSHHHHHHHCCCCS-CCTTS--CCEEEEETTSCEEEEEEGGGTTT-TTT----SCEEEE
T ss_pred CHHHHHHHHHHHCCCcEEEECCCccceeecCCcCC-CCCCc--eEEEEEeCCCcEEEEECcccHHH-hhC----CeEEEE
Confidence 48999999999999999999999999999999974 45544 3678888775 899998765432 222 344555
Q ss_pred c---c----HhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeee
Q psy3139 344 D---L----VWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLT 416 (708)
Q Consensus 344 ~---~----~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~ 416 (708)
. + +.+.|+++....++|+++...+...++.+++ .++.++++
T Consensus 73 ~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~l~~--------------------------------~~~~~~~~ 120 (356)
T 1wn1_A 73 HDGENPYAKLREILEELGISKGRILIEDTMRADWLIGIMK--------------------------------LGKFTFQP 120 (356)
T ss_dssp CTTSCHHHHHHHHHHHTTCSSEEEEECTTSBHHHHHHHGG--------------------------------GSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHhcCCCCEEEEeCCcCHHHHHHHHc--------------------------------CCCCeEEE
Confidence 2 2 2333433321356899995578888877652 23447888
Q ss_pred CCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccC
Q psy3139 417 GPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGT 496 (708)
Q Consensus 417 ~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~ 496 (708)
..+++..+|++||+.||+.||+|+.+++.++.+++. .+++| +||.|+++.+++.+.+. ..+++|++|+++|+
T Consensus 121 ~~~~i~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~----~i~~G--~te~el~~~~~~~~~~~--~~~~~f~~iv~~g~ 192 (356)
T 1wn1_A 121 LSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILT----WDLIG--MKERELALKIELLIREL--SDGIAFEPIVASGE 192 (356)
T ss_dssp THHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTT----SCCTT--CBHHHHHHHHHHHHHHH--SSEESSCCEEEEGG
T ss_pred cHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH----HccCC--CcHHHHHHHHHHHHHHh--CcCCCCCcEEEEec
Confidence 889999999999999999999999999988877664 56678 89999999999876555 45689999999999
Q ss_pred CCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Q psy3139 497 HATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLE 575 (708)
Q Consensus 497 NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD 575 (708)
|+++|||.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++ ||+++.++|
T Consensus 193 n~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~-pG~~~~~i~ 268 (356)
T 1wn1_A 193 NAANPHHEPG---ERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVR-EGIKAKDVD 268 (356)
T ss_dssp GGGCTTCCCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCB-TTSBHHHHH
T ss_pred ccccccCCCC---CCeecCCCEEEEEEEEEECCEEeccEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHH
Confidence 9999999985 7899999 9999999999999999999999999999999999999999999998875 599999999
Q ss_pred HHHHHHHHHcCC--CCCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeecccccc
Q psy3139 576 YLLEQPLLALAL--DYRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYRERY 644 (708)
Q Consensus 576 ~~AR~~L~~~G~--~y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~~~~ 644 (708)
.++|+.+++.|+ .|.|++||||| |++||.| +.+|+||||||+|||+| .+||||||+|+||++
T Consensus 269 ~~~~~~~~~~g~~~~~~h~~GHgiG--l~~he~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt~~----- 341 (356)
T 1wn1_A 269 SRAREVISKAGYGEYFIHRTGHGLG--LDVHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEG----- 341 (356)
T ss_dssp HHHHHHHHTTTCGGGCCSCSEEECS--SSSSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEETT-----
T ss_pred HHHHHHHHHcCCcccCCCCCcccCC--CccCCCcccCCCCCCCcCCCCEEEECCeeEeCCCcEEEEeeEEEEeCC-----
Confidence 999999999999 68999999999 7999998 36899999999999999 689999999999999
Q ss_pred cceeeccCCCccccc
Q psy3139 645 MTMEVRSLFPFESRL 659 (708)
Q Consensus 645 lgfE~LT~vP~~~~l 659 (708)
|+|.||.+|.++..
T Consensus 342 -g~e~Lt~~p~~l~~ 355 (356)
T 1wn1_A 342 -KGRRLTKAERELII 355 (356)
T ss_dssp -EEEESCCCCCSCCB
T ss_pred -ccEECCCCCCccee
Confidence 99999999987643
No 7
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=7.7e-60 Score=509.45 Aligned_cols=332 Identities=15% Similarity=0.188 Sum_probs=283.9
Q ss_pred HhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEE-EEEeCCceEEEecCCCCcHHHHhhcCCcEEEe
Q psy3139 264 ENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAY-FVISTSLCVLYLPKNKITPVLRNYLGDIVIKP 342 (708)
Q Consensus 264 ~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~ay-lvv~~d~~~Lfvd~~kl~~~v~~~l~~v~v~~ 342 (708)
.+|++++|+.|+++++|++++++++|++||||+++.+ .+| ++++.++..+|+++.. . ..+ ....+++.+
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~n~~yltg~~~~~-------~~~~llv~~~~~~l~~~~~~-~-~~~-~~~~~~v~~ 74 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNPNVYYISGASPLA-------GGYILITGESATLYVPELEY-E-MAK-EESNIPVEK 74 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCSS-------CCEEEEETTEEEEEEEHHHH-H-HHH-HHCSSCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCceEecCCCCCC-------CcEEEEEECCCcEEEECchH-H-HHh-hcCCCeEEE
Confidence 5899999999999999999999999999999998865 235 7888888889988765 3 332 233466666
Q ss_pred CccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCCchhH
Q psy3139 343 YDLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVK 422 (708)
Q Consensus 343 Y~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~ 422 (708)
|+.+ +.+.++....++|+++...++..++.+++ .++..++++..+++.
T Consensus 75 ~~~~-~~l~~~l~~~~~ig~e~~~~~~~~~~l~~-------------------------------~~~~~~~~~~~~~i~ 122 (351)
T 1wy2_A 75 FKKM-DEFYKALEGIKSLGIESSLPYGFIEELKK-------------------------------KANIKEFKKVDDVIR 122 (351)
T ss_dssp ESSH-HHHHHHHTTCSEEEECTTCBHHHHHHHHH-------------------------------HSCCCEEEECHHHHH
T ss_pred eCcH-HHHHHHHccCCEEEEcCcCCHHHHHHHHh-------------------------------hCCCCeEEEcHHHHH
Confidence 6553 33443332346899994478888887653 145447889999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcc
Q psy3139 423 DLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAE 502 (708)
Q Consensus 423 ~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~H 502 (708)
.+|++||+.||+.||+|+.+++.++..++. .+++| +||.|+++.++..+.+. +..+++|++|+++|+|+++||
T Consensus 123 ~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~----~i~~G--~te~el~~~~~~~~~~~-g~~~~~f~~iv~~g~n~~~~H 195 (351)
T 1wy2_A 123 DMRIIKSEKEIKIIEKACEIADKAVMAAIE----EITEG--KKEREVAAKVEYLMKMN-GAEKPAFDTIIASGYRSALPH 195 (351)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHHHHHHHHHH----HCCTT--CBHHHHHHHHHHHHHHT-TCSEESSCCEEEEGGGGGSTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHH----hccCC--CcHHHHHHHHHHHHHHc-CCCCCCCCCEEEEcccccccc
Confidence 999999999999999999998888776654 45678 89999999998876554 355689999999999999999
Q ss_pred cCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHH
Q psy3139 503 YRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQP 581 (708)
Q Consensus 503 y~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~ 581 (708)
|.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++| |+++.++|.++|+.
T Consensus 196 ~~~~---~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~p-G~~~~~v~~~~~~~ 271 (351)
T 1wy2_A 196 GVAS---DKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKP-GITAKELDSIARNI 271 (351)
T ss_dssp CBCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHH
T ss_pred CCCC---CcccCCCCEEEEEEEEEECCEEecceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCcHHHHHHHHHHH
Confidence 9986 7899999 99999999999999999999999999999999999999999999988765 99999999999999
Q ss_pred HHHcCC--CCCCCCceecCCCCccccCC------CccccCCcEEeeCCccc---ccCeEEeeEEEEeeccccccccee-e
Q psy3139 582 LLALAL--DYRPQRVHSIGEFLLVQEDF------NSTLNINFFGVVEPEYL---DCGIKIGQVIQVVPAYRERYMTME-V 649 (708)
Q Consensus 582 L~~~G~--~y~HGtGHGVG~~L~VHEgP------~~~Le~GMV~SiEPGiY---~~GIRIEn~VlVte~~~~~~lgfE-~ 649 (708)
+|+.|+ +|.|++||||| |++||+| +.+|+||||||+|||+| .+||||||+|+|| + |+| .
T Consensus 272 ~~~~g~~~~~~h~~GHgiG--l~~hE~p~i~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt-~------G~e~~ 342 (351)
T 1wy2_A 272 IAEYGYGEYFNHSLGHGVG--LEVHEWPRVSQYDETVLREGMVITIEPGIYIPKIGGVRIEDTILIT-K------NGSKR 342 (351)
T ss_dssp HHHTTCGGGCCSCSEEECS--SSSSEEEEESTTCCCBCCTTCEEEECCEEEETTTEEEECBEEEEEE-T------TEEEE
T ss_pred HHHcCCcccCCCCcccccC--CCcCCCCccCCCCCCCcCCCCEEEECCEEEeCCCCeEEEeeEEEEC-C------Cceec
Confidence 999997 48999999999 7999998 36899999999999999 6899999999999 9 999 9
Q ss_pred ccCCCccc
Q psy3139 650 RSLFPFES 657 (708)
Q Consensus 650 LT~vP~~~ 657 (708)
||.+|.++
T Consensus 343 Lt~~p~~l 350 (351)
T 1wy2_A 343 LTKTEREL 350 (351)
T ss_dssp SCCSCSCC
T ss_pred CCCCCccc
Confidence 99998764
No 8
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=9.6e-60 Score=525.74 Aligned_cols=363 Identities=10% Similarity=0.105 Sum_probs=300.2
Q ss_pred cccCCcchHhHHHHHHHHhh--hCCCCEEEEeccc----cc--------hhhccccCCCCCCCcceEEEEEEeCCceEEE
Q psy3139 256 LEYAGEPWENKVQSMKDFMS--SKSVDVMVITALD----QI--------AWLLNLRGKDNPFSPLFKAYFVISTSLCVLY 321 (708)
Q Consensus 256 ~~~~G~~~~~Ki~rvr~~M~--e~g~DallIs~ld----nI--------aWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lf 321 (708)
..++++++.+|++++|+.|+ ++++|++||++++ |+ +||||+++. .++++|+.++++||
T Consensus 6 ~~~~~~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~~y~~~~~~~~yLtGf~~~--------~~~lvVt~d~~~L~ 77 (467)
T 3biq_A 6 LNIDFDVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEFP--------ATLIALVPGKVIII 77 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTSTTCHHHHHHHHHHSSCCS--------SEEEEEETTEEEEE
T ss_pred cccCHHHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCCCCccchhhhhHhhCCCCC--------CEEEEEECCeEEEE
Confidence 45789999999999999999 9999999999998 99 599999862 26899999999999
Q ss_pred ecCCCCc--HHHHh--hcC----CcEEEeC--c------cHhhhhhhhhhC-CCEEEec-CC-chHHHHHHHhhhhhcCc
Q psy3139 322 LPKNKIT--PVLRN--YLG----DIVIKPY--D------LVWTDLPEFVRT-GKCLYLP-DE-ANFLLYAWMKNAETAGF 382 (708)
Q Consensus 322 vd~~kl~--~~v~~--~l~----~v~v~~Y--~------~~~~~L~~l~~~-~~~I~id-~~-~~~~l~~~l~~~~~ag~ 382 (708)
++..+.. ..++. .+. .+++.+| . +..+.|.++... +++|+++ ++ .+...+..+++
T Consensus 78 ~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~~~~~~~~~~~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~------ 151 (467)
T 3biq_A 78 TSSAKAKHLQKAIDLFKDPESKITLELWQRNNKEPELNKKLFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNP------ 151 (467)
T ss_dssp EEHHHHHHHHHHHGGGCC--CCCEEEEEEECTTCHHHHHHHHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHH------
T ss_pred ECCcchHHHHHHhhhcccccCCCCeEEEEecccccccchhhHHHHHHHHHhhCCEEEEecCcccchhHHHHHHH------
Confidence 9975432 23443 222 3666766 3 233445444321 4689985 34 56666666542
Q ss_pred cCCCCccccccccccccccccccccCC------CCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3139 383 QDDKGYHIEGYWYTWRTAVDRWSIDEV------PPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEK 456 (708)
Q Consensus 383 ~~~~~~~~~~~~~~~~~a~~~~~~~~l------~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~ 456 (708)
.+ ++.++++..+++..+|++||+.||+.||+|+.+++.++.+++.++++
T Consensus 152 -------------------------~l~~~~~~~~~~lv~~~~~i~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~ 206 (467)
T 3biq_A 152 -------------------------VWEAAVKENEFNVIDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVR 206 (467)
T ss_dssp -------------------------HHHHHHHHHTCEEEECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------HHHhhcccCCceeechHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 02 23578888899999999999999999999999999999999999998
Q ss_pred cCCCCCccCHHHHHHHHHHHHhh-----cC----------------CCCCCCCCccccccCCCC-CcccCCCCCCCcccc
Q psy3139 457 GIESGELWDELKVLECVDQLRGE-----HW----------------SYIGNSFPPTAAHGTHAT-DAEYRPDAKTNVKIG 514 (708)
Q Consensus 457 ~i~~G~~~TE~eva~~l~~~r~~-----~~----------------~~~~~SF~tIva~G~NaA-i~Hy~p~~~t~~~l~ 514 (708)
.+.+|..+||.++++.++.++.+ .+ .+.+++|++|+++|+|++ +|||.|+ +++|+
T Consensus 207 ~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~f~~iv~~G~n~~~~~H~~~~---~~~l~ 283 (467)
T 3biq_A 207 AVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARST---NDQLY 283 (467)
T ss_dssp HHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCC---SSBCC
T ss_pred cccccCCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCCcccccCCCCCeEEecCCcceeeccCCC---CCccC
Confidence 77664238999999999886554 22 124689999999999999 9999986 78999
Q ss_pred CC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcC--C--CC
Q psy3139 515 DD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALA--L--DY 589 (708)
Q Consensus 515 ~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G--~--~y 589 (708)
+| +|++|+|++|.+|++|+||||++| |+++|+++|+.|++++.+++.++++||+++.++|.+||+.+|+.| + +|
T Consensus 284 ~gd~v~iD~g~~~~gy~sD~tRT~~~g-~~~~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~ 362 (467)
T 3biq_A 284 GNGCILASCGIRYNNYCSNITRTFLID-PSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNF 362 (467)
T ss_dssp CSEEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGB
T ss_pred CCCEEEEEEeEEECCEEeeeeEEEEeC-CCHHHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhhcC
Confidence 99 999999999999999999999999 999999999999999999998845679999999999999999997 3 58
Q ss_pred CCCCceecCCCCccccCC--------CccccCCcEEeeCCccc---------ccCeEEeeEEEEe--ecccccccceeec
Q psy3139 590 RPQRVHSIGEFLLVQEDF--------NSTLNINFFGVVEPEYL---------DCGIKIGQVIQVV--PAYRERYMTMEVR 650 (708)
Q Consensus 590 ~HGtGHGVG~~L~VHEgP--------~~~Le~GMV~SiEPGiY---------~~GIRIEn~VlVt--e~~~~~~lgfE~L 650 (708)
.|++||||| |++||.| +.+|+||||||+|||+| .+||||||+|+|| ++ |+|+|
T Consensus 363 ~h~~GHgiG--l~~hE~p~~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt~~~~------G~e~L 434 (467)
T 3biq_A 363 TKNIGSLIG--LEFRDSNFILNVKNDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIPLDET------EPPRF 434 (467)
T ss_dssp CSCCEEECS--SSSCCGGGBSSTTCCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECCSSTT------SCCEE
T ss_pred CCCcccccc--cccccCCccCCCCCCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEecCCC------CcEEe
Confidence 999999999 7999998 24799999999999998 4689999999999 88 99999
Q ss_pred c-CCCccccccccccCCHHH
Q psy3139 651 S-LFPFESRLIDTSQLEPHE 669 (708)
Q Consensus 651 T-~vP~~~~lId~~~Lt~~e 669 (708)
| .+|.++.+|+..|++++|
T Consensus 435 t~~~p~~~~~i~~~~~~~~e 454 (467)
T 3biq_A 435 LTNYTKAKSQISFYFNNEEE 454 (467)
T ss_dssp SCCSCCCHHHHEECC-----
T ss_pred cccCCCCHHHHHHHHhcccc
Confidence 9 999999999999999988
No 9
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=2.1e-58 Score=504.66 Aligned_cols=350 Identities=13% Similarity=0.049 Sum_probs=293.9
Q ss_pred cccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhc
Q psy3139 256 LEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYL 335 (708)
Q Consensus 256 ~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l 335 (708)
..|+.+++.+|++++|+.|+++++|++|+++++|++||||++|++. ..| ++++|+.+++.||++..+......+ +
T Consensus 17 ~~~~~~e~~~Rl~~Lr~~m~~~~lDa~li~~~~ni~yltgf~~s~~-~~p---~~llV~~~~~~l~~~~~~~~~a~~~-~ 91 (402)
T 1kp0_A 17 TPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSGWLYCYF-GRK---YAZVIBZVKAVTISKGIDGGMPWRR-S 91 (402)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCCCT-TCC---CEEEECSSCEEEEEEGGGTTHHHHH-C
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEcCCCCceEecCCCCCCC-Cce---EEEEEeCCCCEEEeccchhhhhHHh-c
Confidence 3577899999999999999999999999999999999999999765 344 5788888889999998766543333 3
Q ss_pred CC--cEEEeC--ccHhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCC
Q psy3139 336 GD--IVIKPY--DLVWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVP 410 (708)
Q Consensus 336 ~~--v~v~~Y--~~~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~ 410 (708)
.. +.+.++ ++..+.|.++....++|++|++ .+...++.+++ .++
T Consensus 92 ~~~~v~~~~~~~~~~~~~l~~~l~~~~~igvd~~~~~~~~~~~l~~-------------------------------~l~ 140 (402)
T 1kp0_A 92 FGBNIVYTDWKRDNFYSAVKKLVKGAKZIGIEHDHVTLBHRRZLZK-------------------------------ALP 140 (402)
T ss_dssp SSEEEEECSSSTTHHHHHHHHHHTTCSEEEECTTTCBHHHHHHHHH-------------------------------HST
T ss_pred cCcceEeccccccCHHHHHHHHhccCCEEEEecCCCCHHHHHHHHH-------------------------------hCC
Confidence 22 334344 2345666665434679999987 78888877653 155
Q ss_pred CCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhc---CCCCCCC
Q psy3139 411 PLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEH---WSYIGNS 487 (708)
Q Consensus 411 ~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~---~~~~~~S 487 (708)
+.++++..+++..+|++||+.||+.||+|+.+++.++.+++.+ +++| +||.|+++.+++.+.+. ..+.+.+
T Consensus 141 ~~~~v~~~~~i~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~----i~~G--~te~el~~~~~~~~~~~g~~~~~~~~~ 214 (402)
T 1kp0_A 141 GTEFVDVGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAA----ISAG--VPEYEVAIATTBAMVRZIARBFPYVEL 214 (402)
T ss_dssp TCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHH----CCTT--CBHHHHHHHHHHHHHHHHHHHSSSCEE
T ss_pred CCEEEECHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----hcCC--CcHHHHHHHHHHHHHHhcccccCcccc
Confidence 5688888899999999999999999999999998888776654 5568 89999999888754332 1112333
Q ss_pred CC--ccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhc
Q psy3139 488 FP--PTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQ 564 (708)
Q Consensus 488 F~--tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~ 564 (708)
|+ +|+++|+|++++||.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.++
T Consensus 215 ~~~~~iv~~g~n~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~ 291 (402)
T 1kp0_A 215 MDTWIWFQSGINTDGAHNPVT---BRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLI 291 (402)
T ss_dssp EEEEEEEEEGGGGGSTTCCEE---CCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccceeecccccccccCCCC---CcccCCCCEEEEEEEeeECCEeeecEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 44 48899999999999875 7899999 999999999999999999999999999999999999999999999888
Q ss_pred CCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCCC-----------ccccCCcEEeeCCccc-c-----
Q psy3139 565 FLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDFN-----------STLNINFFGVVEPEYL-D----- 625 (708)
Q Consensus 565 fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP~-----------~~Le~GMV~SiEPGiY-~----- 625 (708)
+| |+++.++|.++|+.+++.|+. |.|++||||| +++||.|. .+|+||||||+|||+| .
T Consensus 292 ~p-G~~~~~i~~~~~~~~~~~G~~~~~~~~~GHgiG--~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~ 368 (402)
T 1kp0_A 292 KP-GARCKDIASELNBMYRZWDLLRYRTFGYGHSFG--VLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBPEGEPG 368 (402)
T ss_dssp CT-TCBHHHHHHHHHHHHHHTTCGGGBCSCSCBBCE--EEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEECTTSTT
T ss_pred CC-CCcHHHHHHHHHHHHHHcCCCeecCCCcccccC--CccccCCcccCcccCCCCCCccCCCcEEEECCceeecCccCC
Confidence 76 999999999999999999996 7899999999 48999762 4899999999999999 3
Q ss_pred -cCeEEeeEEEEeecccccccceeeccCCCccccc
Q psy3139 626 -CGIKIGQVIQVVPAYRERYMTMEVRSLFPFESRL 659 (708)
Q Consensus 626 -~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~l 659 (708)
+|+||||+|+||++ |+|.||.+|.++++
T Consensus 369 ~~G~ried~v~Vt~~------g~e~Lt~~p~~~~~ 397 (402)
T 1kp0_A 369 AGGYREHDILVIKEN------BTENITGFPFGPEH 397 (402)
T ss_dssp CEEEECBEEEEEETT------EEEECCCSCCSTTT
T ss_pred CCcEEEEEEEEEcCC------cceECCCCCCchHH
Confidence 68999999999999 99999999998876
No 10
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=3e-57 Score=507.06 Aligned_cols=352 Identities=10% Similarity=0.027 Sum_probs=289.7
Q ss_pred cCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCC--CCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhc
Q psy3139 258 YAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKD--NPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYL 335 (708)
Q Consensus 258 ~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~D--v~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l 335 (708)
+...++++|++++|+.|+++++|+++|++++||+||||++|.+ ++++|+ ++++|+.++..+|++.+... .+..+.
T Consensus 74 ~~~~~~~~Rl~rlr~~m~~~glDalli~~~~ni~YlTGf~g~~~~~~~~~~--~~llV~~dg~~~l~d~r~~~-~l~~~~ 150 (470)
T 4b28_A 74 DLAAMRRFRHRRLTDHVVARGYAGLLMFDPLNIRYATDSTNMQLWNTHNPF--RATLLCADGYMVMWDYKNSP-FLSEFN 150 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHCCCSSHHHHHHSCC--CEEEEETTSCEEEECCTTCG-GGGTTC
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCEEEEcCCCcceeecCCCCCcccccCCCC--EEEEEECCCCEEEEecchhh-hhhhhh
Confidence 3456789999999999999999999999999999999999976 445564 57899988777888765421 111111
Q ss_pred CC-cEEEeC--------------------ccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccc
Q psy3139 336 GD-IVIKPY--------------------DLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYW 394 (708)
Q Consensus 336 ~~-v~v~~Y--------------------~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~ 394 (708)
.. -+++++ +.+.+.|+++....++|++|+. +...++.|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~igve~~-~~~~~~~L~~------------------ 211 (470)
T 4b28_A 151 PLVREQRAGADLFYFDRGDKVDVAADVFANEVRILLRDHAPGLRRLAVDKV-MLHGLRALQA------------------ 211 (470)
T ss_dssp TTSCEEECCCCCSHHHHGGGHHHHHHHHHHHHHHHHHHHSTTCCEEEESSC-CHHHHHHHHH------------------
T ss_pred hHHHHHHhcCCeeeeccCccccccchhHHHHHHHHHHHhCccCceeeeCcc-hHHHHHHHHc------------------
Confidence 11 122221 1223444544323578999986 4455666542
Q ss_pred cccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHH
Q psy3139 395 YTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVD 474 (708)
Q Consensus 395 ~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~ 474 (708)
++.++++..+++..+|++||++||+.||+|+.+++.++.+++.++++.+..|. +||.++++.++
T Consensus 212 ---------------~~~~~vd~~~~v~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~-~tE~el~~~l~ 275 (470)
T 4b28_A 212 ---------------QGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGV-TCENDIWAILH 275 (470)
T ss_dssp ---------------TTCEEEEHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC-CBHHHHHHHHH
T ss_pred ---------------CCCEEEEcHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CCHHHHHHHHH
Confidence 24578899999999999999999999999999999999999999988765443 69999999998
Q ss_pred HHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecc-cCCcccceeeEEecC--CCCHHHHHHH
Q psy3139 475 QLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQ-YLDGTTKVNAILHCG--IPTPLQRSVY 550 (708)
Q Consensus 475 ~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~q-Y~~gtTDiTRTv~~G--~pt~eqr~~y 550 (708)
....+.+. ..+|.+|+++|+|++.+||.|+ +++|++| +|++|+|++ |.+|++|+||||++| +|+++++++|
T Consensus 276 ~~~~~~G~--~~~~~~ivasG~n~~~~H~~~~---~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y 350 (470)
T 4b28_A 276 SENVRRGG--EWIETRLLASGPRSNPWFQECG---PRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAM 350 (470)
T ss_dssp HHHHTTTC--CEESCCCEEEGGGGSSTTCCCC---SCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHH
T ss_pred HHHHHcCC--CcCCCceeEEcCccccCCCCCC---CccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHH
Confidence 86444432 2578899999999999999974 7899999 999999998 889999999999999 7999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCCCCCCceecCCCCccccCC-------------CccccCCcEE
Q psy3139 551 TAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDYRPQRVHSIGEFLLVQEDF-------------NSTLNINFFG 617 (708)
Q Consensus 551 t~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y~HGtGHGVG~~L~VHEgP-------------~~~Le~GMV~ 617 (708)
+.|++++.+++.+++| |+++.++|.+||+.+|+.|.++.|++|||||. +||+| +.+|+|||||
T Consensus 351 ~~v~~a~~a~i~~ikp-G~~~~di~~~ar~~i~~~~~~~~~~~GHGIGl---~HE~P~i~~~~~~~~~~~~~~L~~GMV~ 426 (470)
T 4b28_A 351 QHGVEHIRTNMEMLKP-GVMIPELSANTHVLDAKFQKQKYGCLMHGVGL---CDEWPLVAYPDHAVAGAYDYPLEPGMTL 426 (470)
T ss_dssp HHHHHHHHHHHHTCCT-TCBHHHHHHTCCCCCHHHHTTCCSCSEEEESS---SEEEEEECCTTTCCTTSSCCBCCTTCEE
T ss_pred HHHHHHHHHHHHHccC-CCCHHHHHHHHHHHHHHhhhcCCCCccCCCCc---CCCCCcccCccccccCCCCCEECCCCEE
Confidence 9999999999988865 99999999999999999888888999999994 69988 1479999999
Q ss_pred eeCCccc----ccCeEEeeEEEEeecccccccceeeccCCCcccccccc
Q psy3139 618 VVEPEYL----DCGIKIGQVIQVVPAYRERYMTMEVRSLFPFESRLIDT 662 (708)
Q Consensus 618 SiEPGiY----~~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~lId~ 662 (708)
|+|||+| .+||||||+|+||++ |||+||.+|+++.+|-.
T Consensus 427 tiEPgiy~~~g~~GvriEd~vlVte~------G~e~LT~~p~~l~li~~ 469 (470)
T 4b28_A 427 CVEALISEEGGDFSIKLEDQVLITED------GYENLTKYPFDPALMGV 469 (470)
T ss_dssp EEEEEEECTTCSCEEEEEEEEEECSS------SEEECCCCCCCHHHHC-
T ss_pred EEcCeeecCCCcEEEEEeeEEEEeCC------cCeECCCCCCcHHhccC
Confidence 9999999 579999999999999 99999999999988754
No 11
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=8e-57 Score=498.58 Aligned_cols=360 Identities=13% Similarity=0.096 Sum_probs=290.8
Q ss_pred cccCCcchHhHHHHHHHHhhh--------CCCCEEEEeccc----c--------chhhccccCCCCCCCcceEEEEEEeC
Q psy3139 256 LEYAGEPWENKVQSMKDFMSS--------KSVDVMVITALD----Q--------IAWLLNLRGKDNPFSPLFKAYFVIST 315 (708)
Q Consensus 256 ~~~~G~~~~~Ki~rvr~~M~e--------~g~DallIs~ld----n--------IaWLtnlRG~Dv~~~Pvf~aylvv~~ 315 (708)
..|+++++.+|++++|+.|++ +++|+++|++++ + ++||||+++.+ ++++++.
T Consensus 6 ~~~~~~~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~~~y~q~~~~~~yLtG~~~~~--------~~lvi~~ 77 (444)
T 3cb6_A 6 YEIDEITFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDTNPYQKSTALHTWLLGYEFPS--------TLILLEK 77 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTTCCCCHHHHHHHHHHSSCCSS--------EEEEEET
T ss_pred CCcCHHHHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCCCCcccchhhhHHHhCCCCCC--------EEEEEeC
Confidence 468899999999999999998 999999999997 6 89999998754 6788898
Q ss_pred CceEEEecCCCC--cHHHH-hhcCC--cEEEeC-cc------Hhhhh-hhhhhCCCEEEecC-C-chHHHHHHHhhhhhc
Q psy3139 316 SLCVLYLPKNKI--TPVLR-NYLGD--IVIKPY-DL------VWTDL-PEFVRTGKCLYLPD-E-ANFLLYAWMKNAETA 380 (708)
Q Consensus 316 d~~~Lfvd~~kl--~~~v~-~~l~~--v~v~~Y-~~------~~~~L-~~l~~~~~~I~id~-~-~~~~l~~~l~~~~~a 380 (708)
++++||++..+. ...+. ..+.+ +.+.+| .+ ..+.+ ..+...+++|++++ + .+...+..+.+
T Consensus 78 ~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~---- 153 (444)
T 3cb6_A 78 HRITILTSVNKANMLTKLAETKGAAADVNILKRTKDAEENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDS---- 153 (444)
T ss_dssp TEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECSCHHHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHH----
T ss_pred CcEEEEEcCchHHHHhhhhccccCCccEEEEecccccccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHH----
Confidence 889999986432 22343 33332 556655 31 12222 22322246899875 3 44443333221
Q ss_pred CccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCC
Q psy3139 381 GFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWV-RLVHRIEKGIE 459 (708)
Q Consensus 381 g~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~-~~l~~l~~~i~ 459 (708)
++. ..+++.++++..+++..+|++||+.||+.||+|+.+++.++. .++.|+.+.++
T Consensus 154 -------------------~l~----~~~~~~~~~~~~~~i~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~ 210 (444)
T 3cb6_A 154 -------------------IFE----PVKSEFNLVDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYID 210 (444)
T ss_dssp -------------------HHT----TTGGGSEEEECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred -------------------HHh----hccCCceEeecHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000 001335788888999999999999999999999999999999 78888888888
Q ss_pred CCCccCHHHHHHHHHHHHhh--------cC--CC----CCCCCCccccccCCCC-CcccCCCCCCCccccCC-eEEEEee
Q psy3139 460 SGELWDELKVLECVDQLRGE--------HW--SY----IGNSFPPTAAHGTHAT-DAEYRPDAKTNVKIGDD-ILRVSYG 523 (708)
Q Consensus 460 ~G~~~TE~eva~~l~~~r~~--------~~--~~----~~~SF~tIva~G~NaA-i~Hy~p~~~t~~~l~~g-llLiDsG 523 (708)
+|..+||.++++.++..+.+ .+ .+ .+++|++|+++|+|++ +|||.|+ +++|+ | +|++|+|
T Consensus 211 ~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~~~~~~~f~~iv~~g~n~~~~~H~~~~---~~~l~-gd~v~iD~g 286 (444)
T 3cb6_A 211 QGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITD---DRNLH-GDVVLCSLG 286 (444)
T ss_dssp HTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCGGGEEESSCCEEECTTCCCCSTTCCCC---SSBCC-SSEEEEEEC
T ss_pred cccccCHHHHHHHHHHHHHHhccccccccccccccccccccccCceEeccCCcCceeccCCC---CCccc-CCEEEEEEe
Confidence 88548999999999876432 11 13 3589999999999999 9999885 78898 9 9999999
Q ss_pred cccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcC--C--CCCCCCceecCC
Q psy3139 524 SQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALA--L--DYRPQRVHSIGE 599 (708)
Q Consensus 524 ~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G--~--~y~HGtGHGVG~ 599 (708)
++|.+|++|+||||++| ||++|+++|+.|++++.+++.++ +||+++.++|.++|+.+++.| + .|.|++|||||
T Consensus 287 ~~~~gy~sD~tRT~~v~-~~~~~~~~y~~v~~a~~~~~~~~-~pG~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiG- 363 (444)
T 3cb6_A 287 FRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLFEYC-RDGAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIG- 363 (444)
T ss_dssp EEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHHHHC-STTCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECS-
T ss_pred EeeCCEeeeeeEEEEec-CCHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHhhhhhhHhhcccccccccC-
Confidence 99999999999999998 89999999999999999998886 569999999999999999984 5 48999999999
Q ss_pred CCccccCC-------CccccCCcEEeeCCccc-c------------cCeEEeeEEEEeecccccccceeeccCCCccccc
Q psy3139 600 FLLVQEDF-------NSTLNINFFGVVEPEYL-D------------CGIKIGQVIQVVPAYRERYMTMEVRSLFPFESRL 659 (708)
Q Consensus 600 ~L~VHEgP-------~~~Le~GMV~SiEPGiY-~------------~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~l 659 (708)
|++||.| +.+|+||||||+|||+| . +||||||+|+||++ |+|+||.+|.+...
T Consensus 364 -l~~he~p~~~~~~~~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~~------g~e~Lt~~p~~l~~ 436 (444)
T 3cb6_A 364 -IEFRESSLLVNAKNPRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITRS------DPIVFTDSPKAQGD 436 (444)
T ss_dssp -SSSCBGGGCCSTTCCCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCSS------SCEETTCCCCSHHH
T ss_pred -ccccCCccccCCCCCcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECCC------CceecccCCCcHHH
Confidence 7999987 25899999999999998 3 79999999999999 99999999999988
Q ss_pred ccccc
Q psy3139 660 IDTSQ 664 (708)
Q Consensus 660 Id~~~ 664 (708)
|+..|
T Consensus 437 Ie~~~ 441 (444)
T 3cb6_A 437 ISYFF 441 (444)
T ss_dssp HEECC
T ss_pred HHhhh
Confidence 87644
No 12
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.8e-56 Score=490.82 Aligned_cols=358 Identities=12% Similarity=0.089 Sum_probs=289.9
Q ss_pred CCcceecccccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEE-EEEeCCceEEEecCCC
Q psy3139 248 PSVVFIHPLEYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAY-FVISTSLCVLYLPKNK 326 (708)
Q Consensus 248 ~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~ay-lvv~~d~~~Lfvd~~k 326 (708)
-+|--..+..|+|+++.+|++++|+.|+++++|++++++++|++||+|+.. +|++..+ ++|+.++.++|++...
T Consensus 8 ~~~~~~~~~~~~~~e~~~R~~~l~~~m~~~~~da~li~~~~ni~yltg~~~-----~~~~~~~~llv~~~~~~l~~~~~~ 82 (401)
T 1chm_A 8 IRNGDKVRSTFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLY-----CSFGRPYALVVTEDDVISISANID 82 (401)
T ss_dssp CCCSCCCCCSSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCC-----CCTTCCCEEEECSSCEEEEEEGGG
T ss_pred ecCCCccccCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcccceeeCCCCc-----CCCCCeEEEEEecCCCEEEecccc
Confidence 344445567899999999999999999999999999999999999998754 4444343 4577788888887544
Q ss_pred CcHHHHhhcC-C-cEEEe--CccHhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCcccccccccccccc
Q psy3139 327 ITPVLRNYLG-D-IVIKP--YDLVWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAV 401 (708)
Q Consensus 327 l~~~v~~~l~-~-v~v~~--Y~~~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~ 401 (708)
......+.+. . +.+.+ ++++.+.|.++....++|++|.+ .++..++.+++
T Consensus 83 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~~~i~ve~~~~~~~~~~~l~~------------------------- 137 (401)
T 1chm_A 83 GGQPWRRTVGTDNIVYTDWQRDNYFAAIQQALPKARRIGIEHDHLNLQNRDKLAA------------------------- 137 (401)
T ss_dssp TTHHHHHCCSSEEEEECTTSTTHHHHHHHHHCSCCSEEEECTTTCBHHHHHHHHH-------------------------
T ss_pred hhhHHHhhcccceeeeccccccCHHHHHHHHhccCCeEEEecCCCCHHHHHHHHh-------------------------
Confidence 4333333333 2 33333 34566777776534578999976 78888887653
Q ss_pred ccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-Hhh-
Q psy3139 402 DRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL-RGE- 479 (708)
Q Consensus 402 ~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~-r~~- 479 (708)
.+++.++++..+++..+|++||++||+.||+|+.....++..+ .+.+++| +||.|+++.+++. +..
T Consensus 138 ------~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~----~~~i~~G--~tE~el~~~~~~~~~~~~ 205 (401)
T 1chm_A 138 ------RYPDAELVDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAV----VEALGDQ--VPEYEVALHATQAMVRAI 205 (401)
T ss_dssp ------HCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH----HHHCCTT--CBHHHHHHHHHHHHHHHH
T ss_pred ------hCCCCEEEEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH----HHHccCC--CcHHHHHHHHHHHHHHhc
Confidence 1566788999999999999999999999999987766655443 3567778 8999999887653 221
Q ss_pred -cCCCCCCCCCcc--ccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHH
Q psy3139 480 -HWSYIGNSFPPT--AAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILK 555 (708)
Q Consensus 480 -~~~~~~~SF~tI--va~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLk 555 (708)
.......+|+++ +++|.|++.+||.|+ +++|++| +|++|+|++|.+|++|+||||++|+||++|+++|+.|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~g~n~~~~H~~~~---~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~~~~~~~~~y~~v~~ 282 (401)
T 1chm_A 206 ADTFEDVELMDTWTWFQSGINTDGAHNPVT---TRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVE 282 (401)
T ss_dssp HHHCSSCCBCCCEEEEEEGGGGGSTTCCEE---SCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cccCCCccccCcceeeeecccccccccCCC---CCccCCCCEEEEEEEEeeCCEeecceEEEECCCCCHHHHHHHHHHHH
Confidence 111123568874 789999999999875 7899999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC-----------CccccCCcEEeeCCc
Q psy3139 556 GLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF-----------NSTLNINFFGVVEPE 622 (708)
Q Consensus 556 a~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP-----------~~~Le~GMV~SiEPG 622 (708)
++.+++.+++| |+++.++|.++|+.+++.|+. +.||+|||||. .+||.| +.+|+||||||+|||
T Consensus 283 a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~G~~~~~~~~~GHgiG~--~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPg 359 (401)
T 1chm_A 283 VHEAGLKLIKP-GARCSDIARELNEIFLKHDVLQYRTFGYGHSFGT--LSHYYGREAGLELREDIDTVLEPGMVVSMEPM 359 (401)
T ss_dssp HHHHHHHHCCT-TCBHHHHHHHHHHHHHHHTCGGGBCSCSCBBCSB--EETTEECCTTSBCCTTCCCBCCTTCEEEECCE
T ss_pred HHHHHHHHcCC-CCcHHHHHHHHHHHHHHcCCCcccCCCCCcccCc--cCCccccccCccccCCCCCccCCCCEEEEcCe
Confidence 99999998887 999999999999999999983 67999999994 788865 258999999999999
Q ss_pred cc-c------cCeEEeeEEEEeecccccccceeeccCCCccccc
Q psy3139 623 YL-D------CGIKIGQVIQVVPAYRERYMTMEVRSLFPFESRL 659 (708)
Q Consensus 623 iY-~------~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~l 659 (708)
+| . +||||||+|+||++ |+|.||.+|.+.+.
T Consensus 360 iy~~~~~~g~~GvriEd~vlVt~~------G~e~LT~~p~~~~~ 397 (401)
T 1chm_A 360 IMLPEGLPGAGGYREHDILIVNEN------GAENITKFPYGPEK 397 (401)
T ss_dssp EEECTTSTTCEEEECBEEEEEETT------EEEECCCSCCSHHH
T ss_pred eeeccccCCCCeEEEeeeEEECCC------cceECCCCCCChhh
Confidence 99 3 68999999999999 99999999987654
No 13
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=1.2e-55 Score=490.40 Aligned_cols=350 Identities=15% Similarity=0.203 Sum_probs=282.2
Q ss_pred CCcchHhHHHHHHHHhhhCCCCEEEEecc---------------ccchhhccccCCCCCCCcceEEEEEEeC-----Cce
Q psy3139 259 AGEPWENKVQSMKDFMSSKSVDVMVITAL---------------DQIAWLLNLRGKDNPFSPLFKAYFVIST-----SLC 318 (708)
Q Consensus 259 ~G~~~~~Ki~rvr~~M~e~g~DallIs~l---------------dnIaWLtnlRG~Dv~~~Pvf~aylvv~~-----d~~ 318 (708)
+++++++|++++|+.|++++ ++++++.+ .|+.||||+.+ ..+++++.. ++.
T Consensus 4 ~~~e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r~~D~~y~frq~~n~~YltG~~~--------~~~~lvi~~~~~~~~~~ 74 (440)
T 2v3z_A 4 SRQEFQRRRQALVEQMQPGS-AALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNE--------PEAVLVLIKSDDTHNHS 74 (440)
T ss_dssp CHHHHHHHHHHHHHHSCSSE-EEEEECCCCCEEETTEECCCCCCHHHHHHHCCCC--------SSCEEEEEECSSSCEEE
T ss_pred CHHHHHHHHHHHHHhcccCC-EEEEECCCccccCCCCCCcccCCCCEEEecCCCC--------CCEEEEEEecCCCCceE
Confidence 56789999999999999877 78888877 78888887643 225677754 468
Q ss_pred EEEecCCCCcHHHH-----------hhcCCcEEEeCccHhhhhhhhhhCCCEEEecCCc-hH------HHHHHHhhhhhc
Q psy3139 319 VLYLPKNKITPVLR-----------NYLGDIVIKPYDLVWTDLPEFVRTGKCLYLPDEA-NF------LLYAWMKNAETA 380 (708)
Q Consensus 319 ~Lfvd~~kl~~~v~-----------~~l~~v~v~~Y~~~~~~L~~l~~~~~~I~id~~~-~~------~l~~~l~~~~~a 380 (708)
+||+++.+...++. +.+.-..+.+|+++.+.|+++....++|+++... +. ..+..+.+
T Consensus 75 ~Lf~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~---- 150 (440)
T 2v3z_A 75 VLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRK---- 150 (440)
T ss_dssp EEEECCCCHHHHHHHCCCCHHHHHHHHHTCSEEEEGGGHHHHHHHHHTTCSEEECCTTSCHHHHHHHHHHHHHHHT----
T ss_pred EEEecCCCcccceecCCCCCHHHHHHhcCCCEEeeHHHHHHHHHHHHcCCCEEEEeCCcccchhHHHHHHHHHHhh----
Confidence 99999865443331 1111135788999988888876445789988752 11 12222211
Q ss_pred CccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3139 381 GFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIES 460 (708)
Q Consensus 381 g~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~ 460 (708)
... ...+++.++++..+++..+|++||+.||+.||+|+.+++.++.+++.++ ++
T Consensus 151 -------------------~~~---~~~~~~~~~~~~~~~i~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i----~~ 204 (440)
T 2v3z_A 151 -------------------GSR---QNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKC----RP 204 (440)
T ss_dssp -------------------CGG---GTCCCCSEEECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHC----CT
T ss_pred -------------------hcc---cccCCcceeeeHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc----cC
Confidence 000 0012445788888999999999999999999999999999998887654 56
Q ss_pred CCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEec
Q psy3139 461 GELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHC 539 (708)
Q Consensus 461 G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~ 539 (708)
| +||.++++.++....+. +..+++|++|+++|+|++++||.|+ +++|++| ++++|+|++|.+|++|+||||++
T Consensus 205 G--~tE~el~~~~~~~~~~~-G~~~~~f~~iv~~G~n~~~~H~~~~---~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v 278 (440)
T 2v3z_A 205 G--MFEYHLEGEIHHEFNRH-GARYPSYNTIVGSGENGCILHYTEN---ECEMRDGDLVLIDAGCEYKGYAGDITRTFPV 278 (440)
T ss_dssp T--CBHHHHHHHHHHHHHHT-TCCEESSCCEEEEGGGGGSTTCCCC---CSBCCTTCEEEEEECEEETTEECCEEEEEET
T ss_pred C--CcHHHHHHHHHHHHHHc-CCCcCCCCCeEEEcCccccccCCCC---CccccCCCEEEEEeeEEECCEEEeeEEEEEe
Confidence 8 89999999987643333 3556899999999999999999975 7899999 99999999999999999999999
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHH----HHcCC----------------CCCCCCceecC
Q psy3139 540 -GIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPL----LALAL----------------DYRPQRVHSIG 598 (708)
Q Consensus 540 -G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L----~~~G~----------------~y~HGtGHGVG 598 (708)
|+||++|+++|+.|++++.+++.+++| |+++.+++.++++.+ |+.|+ .|.||+|||||
T Consensus 279 ~G~~~~~~~~~y~~v~~a~~~~i~~~~p-G~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiG 357 (440)
T 2v3z_A 279 NGKFTQAQREIYDIVLESLETSLRLYRP-GTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLG 357 (440)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCC
Confidence 999999999999999999999988876 999999999988876 45553 37999999999
Q ss_pred CCCccccCC------CccccCCcEEeeCCccc--c----------cCeEEeeEEEEeecccccccceeecc-CCCccccc
Q psy3139 599 EFLLVQEDF------NSTLNINFFGVVEPEYL--D----------CGIKIGQVIQVVPAYRERYMTMEVRS-LFPFESRL 659 (708)
Q Consensus 599 ~~L~VHEgP------~~~Le~GMV~SiEPGiY--~----------~GIRIEn~VlVte~~~~~~lgfE~LT-~vP~~~~l 659 (708)
|++||.| +.+|+||||||+|||+| . +||||||+|+||++ |+|+|| .+|++...
T Consensus 358 --l~~he~p~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt~~------G~e~LT~~~p~~~~~ 429 (440)
T 2v3z_A 358 --LDVHDVGVYGQDRSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVITET------GNENLTASVVKKPEE 429 (440)
T ss_dssp --SSSSCCSCCCGGGCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEETT------EEEESSTTSCCSHHH
T ss_pred --cccccCCCcCCCCCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEECCC------cCeECCcccCCCHHH
Confidence 7999999 25899999999999999 3 58999999999999 999999 69999877
Q ss_pred ccc
Q psy3139 660 IDT 662 (708)
Q Consensus 660 Id~ 662 (708)
|+.
T Consensus 430 Ie~ 432 (440)
T 2v3z_A 430 IEA 432 (440)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 14
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=7.8e-54 Score=474.33 Aligned_cols=355 Identities=15% Similarity=0.168 Sum_probs=286.7
Q ss_pred cchHhHHHHHHHHhhhCCC-------------CEEE-EeccccchhhccccCCCCCCCcceEEEEEEeC----CceEEEe
Q psy3139 261 EPWENKVQSMKDFMSSKSV-------------DVMV-ITALDQIAWLLNLRGKDNPFSPLFKAYFVIST----SLCVLYL 322 (708)
Q Consensus 261 ~~~~~Ki~rvr~~M~e~g~-------------Dall-Is~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~----d~~~Lfv 322 (708)
+.+.+|+++|.+.|.+.++ |... +....|+.||||+.+.+ +++++.. .+.+||+
T Consensus 4 ~~~~~RR~~l~~~l~~~~~~i~~~~~~~~~~~d~~~~frq~s~f~YltG~~~~~--------~~~v~~~~~~~~~~~lfv 75 (427)
T 3ig4_A 4 KFFAQNRERLVNTLPDESITILFAGQAPHMSADAHYKFVPNRNFYYVTGIDEPN--------VIFMLKKFGNSVEETLFI 75 (427)
T ss_dssp HHHHHHHHHHHTTSCSSEEEEEECCCCCEEETTEECCCCCCHHHHHHHCCCSTT--------CEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhCcCCCEEEEECCCccccCCCCCCcccCCCCeEEeeCCCCCC--------EEEEEEccCCCceEEEEe
Confidence 5689999999999987543 3322 34446799999987655 3455543 2578999
Q ss_pred cCCC----------CcHHHHhhcCC-cEEEeCccHhhhhhhhhhC--CCEEEecCC---------chHHHHHHHhhhhhc
Q psy3139 323 PKNK----------ITPVLRNYLGD-IVIKPYDLVWTDLPEFVRT--GKCLYLPDE---------ANFLLYAWMKNAETA 380 (708)
Q Consensus 323 d~~k----------l~~~v~~~l~~-v~v~~Y~~~~~~L~~l~~~--~~~I~id~~---------~~~~l~~~l~~~~~a 380 (708)
++.. .+.+......+ -.+.+.+++.+.|..+... .++|+++.. .+...++.+++
T Consensus 76 ~~~~~~~~~w~g~r~~~~~a~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~---- 151 (427)
T 3ig4_A 76 EKSDPVMEKWVGKTVSNEEAEKISGIKKVIYLDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVRE---- 151 (427)
T ss_dssp CCCCTTGGGTTCCCCCHHHHHHHHCCSEEEEGGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHH----
T ss_pred cCCCccceEEeCCCCcHHHHHhcCCCCEEEEhhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHh----
Confidence 8732 22222211112 3577888888888877543 568998753 23445555442
Q ss_pred CccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3139 381 GFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIES 460 (708)
Q Consensus 381 g~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~ 460 (708)
.+|+.++++..+.+..+|++||+.||+.||+|+.+.+.++.+++. .+++
T Consensus 152 ---------------------------~~~~~~~~~~~~~i~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~----~i~p 200 (427)
T 3ig4_A 152 ---------------------------QYPHVTIGNVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLK----HAKA 200 (427)
T ss_dssp ---------------------------HCTTCEEEECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHH----HCCS
T ss_pred ---------------------------hCCCCeEeEhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH----HccC
Confidence 267778899999999999999999999999999999888877764 4567
Q ss_pred CCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEec
Q psy3139 461 GELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHC 539 (708)
Q Consensus 461 G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~ 539 (708)
| +||.++++.++....+. +..+++|++|+++|+|++++||.|+ +++|++| ++++|+|++|.+|++|+||||++
T Consensus 201 G--~tE~el~~~~~~~~~~~-G~~~~~f~~ivasG~n~~~~H~~~~---~~~l~~GdlvliD~G~~~~gY~sDitRT~~v 274 (427)
T 3ig4_A 201 D--MMEYELEAQFDFTLKSS-GIKHHAFNTILASGKNATVLHYEDN---DAQIQNGDLVLLDLGAQKDYYNADISYTFPA 274 (427)
T ss_dssp S--EEHHHHHHHHHHHHHHT-TCCEESSCCEEEEGGGGGSTTCCCC---CSEECTTCEEEEEECEEETTEECCEEEEEET
T ss_pred C--CCHHHHHHHHHHHHHHc-CCCCCCCCCEEEECccccccccCcc---cccCCCCCEEEEEeeeEECcEEEEEEEEEec
Confidence 8 89999999987654333 3456899999999999999999975 7899999 99999999999999999999999
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHc----CC---------CCCCCCceecCCCCcccc
Q psy3139 540 -GIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLAL----AL---------DYRPQRVHSIGEFLLVQE 605 (708)
Q Consensus 540 -G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~----G~---------~y~HGtGHGVG~~L~VHE 605 (708)
|++|++|+++|+.|++++.+++.+++| |+++.+++.+|++.+++. |+ .|.||+||||| |++||
T Consensus 275 ~G~~s~~~~~~y~~vl~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iG--l~vhe 351 (427)
T 3ig4_A 275 NGTFSSRQKQIYNIVLNALKETTEIIKP-GLKFAALNEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLG--LDTHD 351 (427)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTHHHHHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCS--SSSSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHHHHHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCC--cCCCc
Confidence 899999999999999999999988765 999999999999999875 33 47999999999 79999
Q ss_pred CC---CccccCCcEEeeCCccc----ccCeEEeeEEEEeecccccccceeeccC-CCccccccccccCCHHHHHHHH
Q psy3139 606 DF---NSTLNINFFGVVEPEYL----DCGIKIGQVIQVVPAYRERYMTMEVRSL-FPFESRLIDTSQLEPHEIRWIN 674 (708)
Q Consensus 606 gP---~~~Le~GMV~SiEPGiY----~~GIRIEn~VlVte~~~~~~lgfE~LT~-vP~~~~lId~~~Lt~~e~~wln 674 (708)
.| +.+|+||||||+|||+| .+||||||+|+||++ |+|.||. +|.+.+-|.. +|...|+.|||
T Consensus 352 ~~~~~~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt~~------G~e~LT~~~pk~~~~IE~-~m~~~~~~~~~ 421 (427)
T 3ig4_A 352 VGTYKDRVLEEGMVITIEPGLYIEEESIGIRIEDDILVTKD------GHENLSKDIIREVEEIEE-FMRENNVNVKQ 421 (427)
T ss_dssp CCCCTTCBCCTTCEEEECCEEEEGGGTEEEECBEEEEECSS------SEEETTTTSCCSHHHHHH-HHHHHCTTC--
T ss_pred CCCCCCCEeCCCCEEEECCEEEECCCceEEEEeeEEEEeCC------cCeECCCCCCCCHHHHHH-HHccCcccccc
Confidence 77 57899999999999999 258999999999999 9999995 8999999985 66899999999
No 15
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=3.2e-49 Score=444.82 Aligned_cols=359 Identities=15% Similarity=0.166 Sum_probs=268.6
Q ss_pred cccCCcchHhHHHHHHHHhhhCCC----CEEEEec-----------------cccchhhccccCCCCCCCcceEEEEEEe
Q psy3139 256 LEYAGEPWENKVQSMKDFMSSKSV----DVMVITA-----------------LDQIAWLLNLRGKDNPFSPLFKAYFVIS 314 (708)
Q Consensus 256 ~~~~G~~~~~Ki~rvr~~M~e~g~----DallIs~-----------------ldnIaWLtnlRG~Dv~~~Pvf~aylvv~ 314 (708)
..++-+++.+|++++++.|++.+. +++|+.+ ..|++||||++..+ +++++.
T Consensus 17 ~~i~~~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~~d~~y~frq~s~f~YLtG~~~p~--------~~~vi~ 88 (494)
T 2iw2_A 17 LKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPG--------CYGVID 88 (494)
T ss_dssp CCEETHHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEESTTSCCEECCCCCHHHHHHHCCCSSS--------CEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceeecCCCCCCCccCCcceeeecCCCCCC--------eEEEEE
Confidence 357789999999999999998754 5888844 33578999986533 345563
Q ss_pred --CCceEEEecCCCCcHHHHh-----------hcCCcEEEeCccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcC
Q psy3139 315 --TSLCVLYLPKNKITPVLRN-----------YLGDIVIKPYDLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAG 381 (708)
Q Consensus 315 --~d~~~Lfvd~~kl~~~v~~-----------~l~~v~v~~Y~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag 381 (708)
.++.+||+++.....+.+. ....-.+.+++++.+.|+++. .++|++......
T Consensus 89 ~~~~~~~L~~~~~~~~~~~w~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~i~~~~g~~~------------- 153 (494)
T 2iw2_A 89 VDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQK--PSVLLTLRGVNT------------- 153 (494)
T ss_dssp TTTCCEEEEECCCCGGGTTTTCCCCCHHHHHHHHTCSEEEEGGGHHHHHHHTC--CSCEECCCCBCT-------------
T ss_pred ccCCeEEEEECCCCHHHhhhcCCCCCHHHHHHHhCCcccccHHHHHHHHHhcC--CCeEEEecCccc-------------
Confidence 3688999986433221110 011123466677777777653 345655321000
Q ss_pred ccCCCCccccccccccccccccccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy3139 382 FQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESG 461 (708)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G 461 (708)
+.+. ....+ .... ...+ ..+.++..+.+..+|++||+.||+.||+|+.+.+.++.+++. .+++|
T Consensus 154 ---~~~~----~~~~~--~~~~--l~~~-~~~~~~~~~~l~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~----~i~~G 217 (494)
T 2iw2_A 154 ---DSGS----VCREA--SFDG--ISKF-EVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMK----AVKVG 217 (494)
T ss_dssp ---TTCC----BCCCC--CCTT--GGGS-CEECSSHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHH----HCCTT
T ss_pred ---cccc----cccHh--hhhh--hhhc-cccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH----HccCC
Confidence 0000 00000 0000 0001 112333456789999999999999999999999988887765 45678
Q ss_pred CccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCC-CCCCccccCC-eEEEEeecccCCcccceeeEEec
Q psy3139 462 ELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPD-AKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHC 539 (708)
Q Consensus 462 ~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~-~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~ 539 (708)
+||.++++.++.......+...++|++|+++|+|++++||.++ .+++++|++| +|++|+|++|.+|++|+||||++
T Consensus 218 --~tE~el~~~~~~~~~~~~G~~~~~~~~iv~sG~n~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v 295 (494)
T 2iw2_A 218 --MKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPA 295 (494)
T ss_dssp --CBHHHHHHHHHHHHHHHHCCCEESSCCEEEEGGGGGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEET
T ss_pred --CcHHHHHHHHHHHHHHhCCCCcCCCCceEEEcCccccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEE
Confidence 8999999998765433323456899999999999999999764 4568999999 99999999999999999999999
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH----cCC----------------CCCCCCceecC
Q psy3139 540 -GIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLA----LAL----------------DYRPQRVHSIG 598 (708)
Q Consensus 540 -G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~----~G~----------------~y~HGtGHGVG 598 (708)
|++|++|+++|+.|++++.+++.+++| |+++.+++.++++.+++ .|+ .|.||+|||||
T Consensus 296 ~G~~s~~q~~~y~~v~~a~~~~i~~~kp-G~~~~di~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiG 374 (494)
T 2iw2_A 296 NGKFTADQKAVYEAVLRSSRAVMGAMKP-GVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLG 374 (494)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCC
Confidence 999999999999999999999988776 99999999999998764 453 37899999999
Q ss_pred CCCccccCC-------------------CccccCCcEEeeCCccc-c----------------------------cCeEE
Q psy3139 599 EFLLVQEDF-------------------NSTLNINFFGVVEPEYL-D----------------------------CGIKI 630 (708)
Q Consensus 599 ~~L~VHEgP-------------------~~~Le~GMV~SiEPGiY-~----------------------------~GIRI 630 (708)
|+|||.| ..+|+||||||+|||+| . +||||
T Consensus 375 --l~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~gGvRi 452 (494)
T 2iw2_A 375 --IDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRI 452 (494)
T ss_dssp --SSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEEC
T ss_pred --cccccCCCcccccccccccccccCCCCCEeCCCCEEEECCccccccccchhhccccccccccccchhhhhCCCCEEEe
Confidence 7999831 24899999999999999 2 48999
Q ss_pred eeEEEEeecccccccceeeccCCCcccccccccc
Q psy3139 631 GQVIQVVPAYRERYMTMEVRSLFPFESRLIDTSQ 664 (708)
Q Consensus 631 En~VlVte~~~~~~lgfE~LT~vP~~~~lId~~~ 664 (708)
||+|+||++ |+|+||.+|.+...|+..|
T Consensus 453 ED~vlVte~------G~e~LT~~p~~~~~ie~~m 480 (494)
T 2iw2_A 453 EEDVVVTDS------GIELLTCVPRTVEEIEACM 480 (494)
T ss_dssp BEEEEECSS------SEEECCCCCCSHHHHHHHH
T ss_pred eeEEEEcCC------cCeECCCCCCcHHHHHHHH
Confidence 999999999 9999999999988776654
No 16
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=3.8e-48 Score=431.43 Aligned_cols=336 Identities=14% Similarity=0.111 Sum_probs=251.8
Q ss_pred hHhHHHHHHHHhhhCCCCEEEEeccccchhhcc-----ccCCCC-----CCCcceEEEEEEeCC-ceEEEecCCC-C---
Q psy3139 263 WENKVQSMKDFMSSKSVDVMVITALDQIAWLLN-----LRGKDN-----PFSPLFKAYFVISTS-LCVLYLPKNK-I--- 327 (708)
Q Consensus 263 ~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtn-----lRG~Dv-----~~~Pvf~aylvv~~d-~~~Lfvd~~k-l--- 327 (708)
.+.+.+|+++.|++.+.|+++|.+..++.|+++ +|.... .++..--+++++..+ +..||+++.+ +
T Consensus 12 ~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~~frq~~~f~yl~g~~e~p~~~L~~~~~~~~~l~~~~~~d~w~~ 91 (451)
T 3rva_A 12 IEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHK 91 (451)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTCSCCSCSSCEEEECSSSCCEEEEECCCCTTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCcccCCCceEEeccCCCCCEEEEEecCCCeEEEeeccHHhhhc
Confidence 456778899999999999999999999999987 555321 111001256777543 5667766431 0
Q ss_pred -cHHHHhh-cCCc---EEEeCccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccc
Q psy3139 328 -TPVLRNY-LGDI---VIKPYDLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVD 402 (708)
Q Consensus 328 -~~~v~~~-l~~v---~v~~Y~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~ 402 (708)
....... .... .+.+.+++.+.|..+. ....++......+.+..
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~~~~~~g~~~~~~~~~~----------------------------- 140 (451)
T 3rva_A 92 VPPEPNDFWTDSFDIKLLQQADAVEKFLPYDK--SRFAYVGEYIEVAKALG----------------------------- 140 (451)
T ss_dssp CCCSCCSTTGGGSEEEEESSGGGGGGGSCSCG--GGEEEESSCHHHHHHHT-----------------------------
T ss_pred cccCcchhHHhccCeEEEecHHHHHHHHhhcc--CceEEEccCcCHHHhhh-----------------------------
Confidence 0000000 1112 3334455666665432 12233322222221111
Q ss_pred cccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC
Q psy3139 403 RWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS 482 (708)
Q Consensus 403 ~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~ 482 (708)
+...+.++..+.+..+|++||+.||+.||+|+.+.+.++.+++..++ +| +||.+++..+....+ .+
T Consensus 141 ------~~~~~~~~~~~~l~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~----pG--~tE~el~~~~~~~~~--~g 206 (451)
T 3rva_A 141 ------FDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFR----EG--KSEFDINLAYAAASR--QG 206 (451)
T ss_dssp ------CSCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHH----TT--CCHHHHHHHHHHHHT--CC
T ss_pred ------hcccCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhh----cC--CCHHHHHHHHHHHHH--cC
Confidence 22234455667899999999999999999999999988887776654 57 899999887665432 24
Q ss_pred CCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCC--CHHHHHHHHHHHHHHHH
Q psy3139 483 YIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIP--TPLQRSVYTAILKGLIA 559 (708)
Q Consensus 483 ~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~p--t~eqr~~yt~VLka~ia 559 (708)
..+.+|++|+++|+|++++||.|+. .+.+++| ++++|+|++|.+|++|+||||++|++ +++++++|+.|++++.+
T Consensus 207 ~~~~~f~~IVasG~naa~~H~~~~~--~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~a 284 (451)
T 3rva_A 207 DNDVPYTSIVALNEHASILHYMQCD--TVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLT 284 (451)
T ss_dssp TTTSSSCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcCcEEEECCcccccCCCCCC--CcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999863 2357899 99999999999999999999999997 88999999999999999
Q ss_pred HHHhcCCCCCchHHHHHHHHHHHH-----------------HcCC---CCCCCCceecCCCCccccCCC-----------
Q psy3139 560 LVTTQFLPGSSLHRLEYLLEQPLL-----------------ALAL---DYRPQRVHSIGEFLLVQEDFN----------- 608 (708)
Q Consensus 560 l~~a~fp~G~~g~~lD~~AR~~L~-----------------~~G~---~y~HGtGHGVG~~L~VHEgP~----------- 608 (708)
++.+++| |+++.++|.+|++.++ +.|+ .|.||+||||| |+|||.|.
T Consensus 285 ai~~ikP-G~~~~di~~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiG--ldvHe~p~~~~~~~g~~~~ 361 (451)
T 3rva_A 285 LVDSLKP-GVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLG--LQVHDVGGLVNDDRGTPKP 361 (451)
T ss_dssp HHHHCCT-TCBHHHHHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCS--SSSSCTTTTBSSTTCCBCC
T ss_pred HHHHhCC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCccccc--CCcccCccccccccccccc
Confidence 9988776 9999999999999886 5565 48999999999 79999761
Q ss_pred -----------ccccCCcEEeeCCccc-c---------------------------cCeEEeeEEEEeecccccccceee
Q psy3139 609 -----------STLNINFFGVVEPEYL-D---------------------------CGIKIGQVIQVVPAYRERYMTMEV 649 (708)
Q Consensus 609 -----------~~Le~GMV~SiEPGiY-~---------------------------~GIRIEn~VlVte~~~~~~lgfE~ 649 (708)
.+|+||||||+|||+| . +||||||+|+||++ |+|+
T Consensus 362 ~~~~~~~l~~~~~L~~GMV~TIEPGiY~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGvRIED~vlVT~~------G~e~ 435 (451)
T 3rva_A 362 APDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRD------KNEN 435 (451)
T ss_dssp CCTTCTTCCCCCBCCTTCEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------CEEE
T ss_pred cccccccCCCCCCcCCCCEEEECCEEeEchhhhhhhcccccccccccchhhhcCCCCEEEcccEEEECCC------cceE
Confidence 4799999999999999 2 28999999999999 9999
Q ss_pred ccCCC
Q psy3139 650 RSLFP 654 (708)
Q Consensus 650 LT~vP 654 (708)
||..|
T Consensus 436 LT~~~ 440 (451)
T 3rva_A 436 MTRDL 440 (451)
T ss_dssp HHHHT
T ss_pred CCCCC
Confidence 99666
No 17
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=2.9e-46 Score=421.34 Aligned_cols=337 Identities=14% Similarity=0.074 Sum_probs=249.6
Q ss_pred hHhHHHHHHHHhhhCCCCEEEEeccccchhhcc-----ccCCCC-----CCCcceEEEEEEeCC-ceEEEecCCC-C---
Q psy3139 263 WENKVQSMKDFMSSKSVDVMVITALDQIAWLLN-----LRGKDN-----PFSPLFKAYFVISTS-LCVLYLPKNK-I--- 327 (708)
Q Consensus 263 ~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtn-----lRG~Dv-----~~~Pvf~aylvv~~d-~~~Lfvd~~k-l--- 327 (708)
.+.+.+|+++.|++.+.|+++|.+..++.|++| +|.+.. .++..--+++++..+ +..||++..+ +
T Consensus 12 ~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~~~~D~~~pFrq~s~F~yl~g~~e~p~~~l~~~~~~~~~l~~~~~~d~w~g 91 (517)
T 3l24_A 12 IATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHK 91 (517)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCCCBCTTSSCBCCCCCCHHHHTTSSCCSCSSCEEEECSSSCCEEEEECCCCSSSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCceEEecCCCCCCceecCCceEEeccCCCCCEEEEEecCCCeEEEEecchhhhhc
Confidence 456778899999999999999999999999987 665421 111111257777543 5667765421 0
Q ss_pred -cHHHHh-hcCCc---EEEeCccHhhhhhhhhhCCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccc
Q psy3139 328 -TPVLRN-YLGDI---VIKPYDLVWTDLPEFVRTGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVD 402 (708)
Q Consensus 328 -~~~v~~-~l~~v---~v~~Y~~~~~~L~~l~~~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~ 402 (708)
.....+ +.... .+.+.+++.+.|..+. ....+.......+.+..
T Consensus 92 ~~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~~--~~~~~~g~~~~~~~~~~----------------------------- 140 (517)
T 3l24_A 92 VPDEPNEYWADYFDIELLVKPDQVEKLLPYDK--ARFAYIGEYLEVAQALG----------------------------- 140 (517)
T ss_dssp CCCCCCSGGGGGSEEEEESSGGGCGGGSCSCC--TTEEEESSCHHHHHHHT-----------------------------
T ss_pred cccCchhhhhhccCeEEEcCHHHHHHHHhhcc--CceEEEcCCcCHHHhhh-----------------------------
Confidence 000000 01112 3334455555554432 22333332222221111
Q ss_pred cccccCCCCCeeeeCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC
Q psy3139 403 RWSIDEVPPLKLLTGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS 482 (708)
Q Consensus 403 ~~~~~~l~~~~~v~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~ 482 (708)
+...++++..+.+..+|++||+.||+.||+|+.+.+.++.+++..++ +| +||.+++..+....+ .+
T Consensus 141 ------~~~~~~~~~~~~l~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ik----pG--~tE~el~~~~~~~~~--~g 206 (517)
T 3l24_A 141 ------FELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFF----QG--KSEFEIQQAYLLATQ--HS 206 (517)
T ss_dssp ------CCCBSCHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHH----TT--CCHHHHHHHHHHHHT--CC
T ss_pred ------hccCCchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcc----CC--CCHHHHHHHHHHHHH--cC
Confidence 22234556668899999999999999999999999888887776554 58 899999887654322 23
Q ss_pred CCCCCCCccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHH
Q psy3139 483 YIGNSFPPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALV 561 (708)
Q Consensus 483 ~~~~SF~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~ 561 (708)
..+.+|++|+++|+|++++||.|+. .+.+++| ++++|+|++|.+|++|+||||++|++ ++++++|+.|++++.+++
T Consensus 207 ~~~~sf~~IVasG~naa~~H~~p~~--~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~~-~e~~~ly~~vl~Aq~aai 283 (517)
T 3l24_A 207 ENDNPYGNIVALNENCAILHYTHFD--RVAPATHRSFLIDAGANFNGYAADITRTYDFTGE-GEFAELVATMKQHQIALM 283 (517)
T ss_dssp GGGSSSCCEEEEGGGGGCTTCCCCC--SSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSC-SHHHHHHHHHHHHHHHHH
T ss_pred CCcCCcCCEEEEccccccccCCCCC--CccccCCCEEEEeecEEECCEEEEeEEEEEcCCC-HHHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999862 2357999 99999999999999999999999985 788999999999999998
Q ss_pred HhcCCCCCchHHHHHHHHHHHH-----------------HcCC---CCCCCCceecCCCCccccCCC-------------
Q psy3139 562 TTQFLPGSSLHRLEYLLEQPLL-----------------ALAL---DYRPQRVHSIGEFLLVQEDFN------------- 608 (708)
Q Consensus 562 ~a~fp~G~~g~~lD~~AR~~L~-----------------~~G~---~y~HGtGHGVG~~L~VHEgP~------------- 608 (708)
.+++| |+++.++|.+|++.+. +.|+ .|.||+||||| |+|||.|.
T Consensus 284 ~~ikP-Gv~~~dI~~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiG--LdvHE~p~~~~~~~g~~~~~~ 360 (517)
T 3l24_A 284 NQLAP-GKLYGELHLDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIG--LQVHDVGGFMADEQGAHQEPP 360 (517)
T ss_dssp TTCCT-TCBHHHHHHHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCS--SSSSCCCCTTC----------
T ss_pred HHcCC-CCcHHHHHHHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCC--cccccCccccccccccccccc
Confidence 87765 9999999999998875 4444 47999999999 79999761
Q ss_pred ---------ccccCCcEEeeCCccc-c---------------------------cCeEEeeEEEEeecccccccceeecc
Q psy3139 609 ---------STLNINFFGVVEPEYL-D---------------------------CGIKIGQVIQVVPAYRERYMTMEVRS 651 (708)
Q Consensus 609 ---------~~Le~GMV~SiEPGiY-~---------------------------~GIRIEn~VlVte~~~~~~lgfE~LT 651 (708)
.+|+||||||+|||+| . +||||||+|+||++ |+|+||
T Consensus 361 ~~~p~l~~~~~Le~GMV~TIEPGiY~~~~~l~~~~~~~~~~~~~~~~~~~~~g~GGVRIED~VlVT~~------G~e~LT 434 (517)
T 3l24_A 361 EGHPFLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHED------SLENMT 434 (517)
T ss_dssp -----CCTTCBCCTTEEEEECCEEECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSS------CEEEHH
T ss_pred cccccCCCCccccCCcEEEECCEEeechhhhhhhcccccccccccchhhhcCCCCEEEEeeEEEECCC------cCeeCC
Confidence 4799999999999999 2 28999999999999 999999
Q ss_pred -CCCcc
Q psy3139 652 -LFPFE 656 (708)
Q Consensus 652 -~vP~~ 656 (708)
.+|.+
T Consensus 435 ~~~~~~ 440 (517)
T 3l24_A 435 RELRLR 440 (517)
T ss_dssp HHTTCC
T ss_pred Cccchh
Confidence 66666
No 18
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=9.6e-45 Score=376.51 Aligned_cols=218 Identities=12% Similarity=0.122 Sum_probs=193.5
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCC---CC-CCCCccccccCCC
Q psy3139 423 DLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSY---IG-NSFPPTAAHGTHA 498 (708)
Q Consensus 423 ~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~---~~-~SF~tIva~G~Na 498 (708)
.|+++||++||+.||+|+.+++.++.+++ +.+++| +||.|+++.+++...+.+.. .+ .+|++++++|+|+
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~----~~i~pG--~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~ 77 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFIT----DHVKPN--VTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINH 77 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHG----GGCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHH----HHcCCC--CcHHHHHHHHHHHHHHcCCcccccccCCCCcceEecccc
Confidence 47999999999999999988888776554 567788 89999999998765544332 11 4699999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYL 577 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~ 577 (708)
+++||.|+ +++|++| +|++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++| |+++.++|.+
T Consensus 78 ~~~H~~p~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~i~~~ 153 (262)
T 3mx6_A 78 VVCHGIPN---DKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRP-GAKLGDIGYA 153 (262)
T ss_dssp EEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCST-TCBHHHHHHH
T ss_pred cccCCCCC---CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHH
Confidence 99999986 6899999 99999999999999999999999999999999999999999998877765 9999999999
Q ss_pred HHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--ccCeEE--------------
Q psy3139 578 LEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--DCGIKI-------------- 630 (708)
Q Consensus 578 AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~~GIRI-------------- 630 (708)
+|+.+++.|+. +.|++||||| +++||.| +.+|+||||||+|||+| .+||||
T Consensus 154 ~~~~~~~~G~~~~~~~~GHgiG--~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~g~~gvri~~~d~w~~~~~~~~ 231 (262)
T 3mx6_A 154 IQSYAEKHNYSVVRDYTGHGIG--RVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKS 231 (262)
T ss_dssp HHHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTTSCCEEETTCC
T ss_pred HHHHHHHcCCccCCCccccccC--CcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEcCCCeEEEecCCCceEEecCCC
Confidence 99999999996 7899999999 5999977 24799999999999999 888888
Q ss_pred -----eeEEEEeecccccccceeeccCCCcccc
Q psy3139 631 -----GQVIQVVPAYRERYMTMEVRSLFPFESR 658 (708)
Q Consensus 631 -----En~VlVte~~~~~~lgfE~LT~vP~~~~ 658 (708)
||+|+||++ |+|.||..|.++.
T Consensus 232 ~~~~~Ed~v~Vt~~------G~e~LT~~p~~l~ 258 (262)
T 3mx6_A 232 LSAQFEHTIGVTKD------GFEIFTLSPKKLD 258 (262)
T ss_dssp CEEECBEEEEECSS------SEEESCCCTTCCC
T ss_pred ceeeeceEEEECCC------cCeECCCCCcccC
Confidence 999999999 9999999998764
No 19
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=1.6e-44 Score=374.71 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=192.3
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC----CCCCCCCccccccCCCC
Q psy3139 424 LKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS----YIGNSFPPTAAHGTHAT 499 (708)
Q Consensus 424 lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~----~~~~SF~tIva~G~NaA 499 (708)
||+|||+.||+.||+|+.+.+.++.+++ +.+++| +||.|+++.++.+..+.++ +...+|++++++|.|++
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~----~~ikpG--~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~~ 74 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLR----TFIKPG--ITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDE 74 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETTE
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHH----HhCcCC--CCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCccc
Confidence 7899999999999999888777765544 567789 8999999999876444332 12357889999999999
Q ss_pred CcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHH
Q psy3139 500 DAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLL 578 (708)
Q Consensus 500 i~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~A 578 (708)
++||.|+ +++|++| ++++|+|+.|.+|++|+||||++|+++++++++|+.|++++.+++.+++| |+++.++|.++
T Consensus 75 ~~H~~~~---~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kp-G~~~~di~~a~ 150 (264)
T 3tb5_A 75 ICHGFPR---KKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQV-GNRIGDIGHAI 150 (264)
T ss_dssp EECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBHHHHHHHH
T ss_pred ccCCCCC---CccccCCCEEEEeccceecceeeecccccccCCccHHHHHHHHHHHHHHHHHHhhhCC-CCCHHHHHHHH
Confidence 9999985 7899999 99999999999999999999999999999999999999999998877765 99999999999
Q ss_pred HHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--c------------------cC
Q psy3139 579 EQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--D------------------CG 627 (708)
Q Consensus 579 R~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~------------------~G 627 (708)
++.+.+.|+. +.|.+||||| +.+||.| ..+|+||||||+|||+| . +|
T Consensus 151 ~~~~~~~g~~~~~~~~GHgiG--~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~g 228 (264)
T 3tb5_A 151 QTYVEGEGYGVVRDFVGHGIG--PTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLS 228 (264)
T ss_dssp HHHHHHTTCEECCSCCEEECS--SSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCE
T ss_pred HHHHHHcCCceeeeceecCCC--CCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCccE
Confidence 9999999985 6899999999 4899988 14899999999999998 2 37
Q ss_pred eEEeeEEEEeecccccccceeeccCCCcccccccc
Q psy3139 628 IKIGQVIQVVPAYRERYMTMEVRSLFPFESRLIDT 662 (708)
Q Consensus 628 IRIEn~VlVte~~~~~~lgfE~LT~vP~~~~lId~ 662 (708)
|||||+|+||++ |+|+||..|.++..|+.
T Consensus 229 vriEd~vlVT~~------G~e~LT~~p~el~~ie~ 257 (264)
T 3tb5_A 229 CQYEHSLAITKE------GPRILTSQGEELTYLEH 257 (264)
T ss_dssp EECCEEEECCTT------CCEETTCCSSTTCC---
T ss_pred EEeceEEEEcCC------cCEECCCCCcchhhhhc
Confidence 999999999999 99999999977766653
No 20
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=2.5e-44 Score=378.40 Aligned_cols=223 Identities=14% Similarity=0.151 Sum_probs=195.7
Q ss_pred eeCCchhHHHH--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC---CCC-CCC
Q psy3139 415 LTGPSPVKDLK--AYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS---YIG-NSF 488 (708)
Q Consensus 415 v~~~~pI~~lR--aiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~---~~~-~SF 488 (708)
.+..+.+.++| ++||++||+.||+|+.+++.++.+++. .+++| +||.|+++.++.++.+.+. |.+ .+|
T Consensus 20 ~~~~~~i~~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~----~i~~G--~tE~el~~~~~~~~~~~G~~~~~~~~~~f 93 (286)
T 3tav_A 20 GSMVGLFGRKKTVEQRTPGELDAMAAAGSIVGAALVAVRD----AAKAG--VSTLELDQVAESVIREAGAVPSFLGYHGF 93 (286)
T ss_dssp ---CCTTCSCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHH----HCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGC
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHHHHH----hccCC--CcHHHHHHHHHHHHHHcCCcccccccCCC
Confidence 34457788899 999999999999999999888877664 45678 8999999999886554432 222 589
Q ss_pred CccccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q psy3139 489 PPTAAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLP 567 (708)
Q Consensus 489 ~tIva~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~ 567 (708)
++|+++|+|++++||.|+. +++|++| +|++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++|
T Consensus 94 ~~iv~~g~n~~~~H~~p~~--~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp- 170 (286)
T 3tav_A 94 PASICSSVNDQVVHGIPSA--TAVLADGDLVSIDCGAILDGWHGDSAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIP- 170 (286)
T ss_dssp CSSEEEEETTBCSCCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCT-
T ss_pred CCceEEecCccccCCCCCC--CcccCCCCEEEEEEEEEECCEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 9999999999999999852 6899999 99999999999999999999999999999999999999999999887765
Q ss_pred CCchHHHHHHHHHHH----HHc--CCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc-c----
Q psy3139 568 GSSLHRLEYLLEQPL----LAL--ALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL-D---- 625 (708)
Q Consensus 568 G~~g~~lD~~AR~~L----~~~--G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY-~---- 625 (708)
|+++.++|.++|+.+ ++. |+. +.|.+||||| +++||+| +.+|+||||||+|||+| .
T Consensus 171 G~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~ 248 (286)
T 3tav_A 171 GNRLTDVSHAIELGTRAAEKQFDRAFGIVDGYGGHGIG--RSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQT 248 (286)
T ss_dssp TCBHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEEECS--SSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCCcccCCcccCccc--ccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCce
Confidence 999999999999999 999 774 6899999999 5999987 24799999999999999 2
Q ss_pred ---------------cCeEEeeEEEEeecccccccceeeccCCC
Q psy3139 626 ---------------CGIKIGQVIQVVPAYRERYMTMEVRSLFP 654 (708)
Q Consensus 626 ---------------~GIRIEn~VlVte~~~~~~lgfE~LT~vP 654 (708)
+|+||||+|+||++ |+|.||..|
T Consensus 249 ~~~~~~w~~~t~dg~~gvriEd~v~Vt~~------G~e~LT~~p 286 (286)
T 3tav_A 249 RVLADDWTVVTTDGSRAAHWEHTVAVTEA------GPRILTMRP 286 (286)
T ss_dssp EECTTSSCEEETTCCCEEECBEEEECCTT------SCEESSCCC
T ss_pred EecCCCceEEecCCCcEEEeeeEEEECCC------cceeCCCCC
Confidence 48999999999999 999999887
No 21
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=7.3e-44 Score=369.65 Aligned_cols=218 Identities=16% Similarity=0.114 Sum_probs=193.5
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-HhhcCCC----CCCCCCccccccCCC
Q psy3139 424 LKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL-RGEHWSY----IGNSFPPTAAHGTHA 498 (708)
Q Consensus 424 lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~-r~~~~~~----~~~SF~tIva~G~Na 498 (708)
||++||+.||+.||+|+.....+ +.++.+.+++| +||.|+++.++.+ +.+.+.. ...+|++++++|+|+
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~----~~~~~~~i~~G--~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~ 74 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEV----LEMIEPYVKPG--VSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINE 74 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHH----HHHHGGGCSTT--CBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETT
T ss_pred CcccCCHHHHHHHHHHHHHHHHH----HHHHHHHcCCC--CcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccc
Confidence 68999999999999997665544 55666788899 8999999999887 6655432 125799999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYL 577 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~ 577 (708)
+++||.|+. +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++| |+++.+++.+
T Consensus 75 ~~~H~~p~~--~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v~~~ 151 (263)
T 2gg2_A 75 VVCHGIPDD--AKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKP-GINLREIGAA 151 (263)
T ss_dssp EEECCCCCT--TCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCST-TCBHHHHHHH
T ss_pred cccCCCCCC--CcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 999999852 3899999 99999999999999999999999999999999999999999999988876 9999999999
Q ss_pred HHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--c------------------c
Q psy3139 578 LEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--D------------------C 626 (708)
Q Consensus 578 AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~------------------~ 626 (708)
+++.+++.|+. +.|++||||| +.+||+| +.+|+||||||+|||+| . +
T Consensus 152 ~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~ 229 (263)
T 2gg2_A 152 IQKFVEAEGFSVVREYCGHGIG--RGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSL 229 (263)
T ss_dssp HHHHHHHTTCEECSSCCEEECS--SSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCC
T ss_pred HHHHHHHcCCEECCCcccccCC--cceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCCe
Confidence 99999999996 7999999999 5899987 24799999999999998 2 4
Q ss_pred CeEEeeEEEEeecccccccceeeccCCCcccc
Q psy3139 627 GIKIGQVIQVVPAYRERYMTMEVRSLFPFESR 658 (708)
Q Consensus 627 GIRIEn~VlVte~~~~~~lgfE~LT~vP~~~~ 658 (708)
|+||||+|+||++ |+|.||..|.+..
T Consensus 230 g~riEdtvlVt~~------G~e~LT~~p~~l~ 255 (263)
T 2gg2_A 230 SAQYEHTIVVTDN------GCEILTLRKDDTI 255 (263)
T ss_dssp EEECBEEEEEETT------EEEESSCCTTCCS
T ss_pred EEEEEEEEEECCC------ccEEeCCCCcccC
Confidence 7899999999999 9999999998754
No 22
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=7e-44 Score=375.01 Aligned_cols=212 Identities=14% Similarity=0.111 Sum_probs=191.2
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCC----CCCCCccccccCCC
Q psy3139 423 DLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYI----GNSFPPTAAHGTHA 498 (708)
Q Consensus 423 ~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~----~~SF~tIva~G~Na 498 (708)
.+|++||++||+.||+|+.+++.++.+++ +.+++| +||.|+++.++++..+.+.+. ..+|++++++|+|+
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~----~~i~pG--~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~ 110 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAG----KAVAPG--VTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNE 110 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHH----HTCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHH----HhcCCC--CcHHHHHHHHHHHHHHcCCccccccccCCCCceEecccc
Confidence 69999999999999999999988887665 456678 899999999988765554332 25799999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYL 577 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~ 577 (708)
+++||.|+ +++|++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++| |+++.+++.+
T Consensus 111 ~~~H~~p~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~di~~~ 186 (285)
T 3pka_A 111 VICHGIPD---STVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKP-GRALSVIGRV 186 (285)
T ss_dssp EEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TSBTTHHHHH
T ss_pred eeecCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHH
Confidence 99999985 7899999 99999999999999999999999999999999999999999999988876 9999999999
Q ss_pred HHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc-c-------------------c
Q psy3139 578 LEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL-D-------------------C 626 (708)
Q Consensus 578 AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY-~-------------------~ 626 (708)
+++.+++.|+. |.|++||||| +++||+| +.+|+||||||+|||+| . +
T Consensus 187 ~~~~~~~~G~~~~~~~~GHgiG--~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~ 264 (285)
T 3pka_A 187 IESYANRFGYNVVRDFTGHGIG--TTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKW 264 (285)
T ss_dssp HHHHHHTTTCEECCSSCEEBCS--SSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTCCC
T ss_pred HHHHHHHcCCccCCCcccccCC--CcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcCCCceeecCCCceEEecCCCc
Confidence 99999999996 8999999999 5999998 24799999999999999 2 4
Q ss_pred CeEEeeEEEEeecccccccceeeccC
Q psy3139 627 GIKIGQVIQVVPAYRERYMTMEVRSL 652 (708)
Q Consensus 627 GIRIEn~VlVte~~~~~~lgfE~LT~ 652 (708)
|+||||+|+||++ |.|.||.
T Consensus 265 gvriEdtv~Vt~~------G~e~LT~ 284 (285)
T 3pka_A 265 TAQFEHTLLVTDT------GVEILTC 284 (285)
T ss_dssp EEECBEEEEECSS------SEEESSC
T ss_pred EEEEeeEEEECCC------cCeECCC
Confidence 7899999999999 9999995
No 23
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=2.6e-43 Score=365.92 Aligned_cols=214 Identities=14% Similarity=0.133 Sum_probs=188.1
Q ss_pred hHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC---CCC-CCCCccccccC
Q psy3139 421 VKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS---YIG-NSFPPTAAHGT 496 (708)
Q Consensus 421 I~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~---~~~-~SF~tIva~G~ 496 (708)
-..||++||+.||+.||+|+.+... ++.++.+.+++| +||.|+++.+++++.+.+. |.+ .+|++++++|+
T Consensus 10 ~~~~R~iKs~~Ei~~~r~A~~i~~~----~~~~~~~~i~pG--~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~~g~ 83 (262)
T 1o0x_A 10 HHHMIRIKTPSEIEKMKKAGKAVAV----ALREVRKVIVPG--KTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSV 83 (262)
T ss_dssp ---CCCCCCHHHHHHHHHHHHHHHH----HHHHGGGGCSTT--CBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEE
T ss_pred cccccccCCHHHHHHHHHHHHHHHH----HHHHHHHHCCCC--CcHHHHHHHHHHHHHHcCCccccccccCCCcceEecc
Confidence 3569999999999999999766554 455666788889 8999999999886544432 333 58999999999
Q ss_pred CCCCcccCCCCCCCcc-ccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHH
Q psy3139 497 HATDAEYRPDAKTNVK-IGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRL 574 (708)
Q Consensus 497 NaAi~Hy~p~~~t~~~-l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~l 574 (708)
|++++||.|+ +++ |++| ++++|+|++|.+|++|+||||++|+|+++++++|+.|++++.+++.+++| |+++.++
T Consensus 84 n~~~~H~~p~---~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kp-G~~~~~v 159 (262)
T 1o0x_A 84 NEEVVHGLPL---KEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKP-GIRLGDV 159 (262)
T ss_dssp TTBCSCCCCC---TTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCT-TSBHHHH
T ss_pred cccccCCCCC---CCcccCCCCEEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcHHHH
Confidence 9999999985 688 9999 99999999999999999999999999999999999999999999988876 9999999
Q ss_pred HHHHHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--c----------------
Q psy3139 575 EYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--D---------------- 625 (708)
Q Consensus 575 D~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~---------------- 625 (708)
+.++|+.+++.|+. |.|++||||| +++||+| +.+|+||||||+|||+| .
T Consensus 160 ~~~~~~~~~~~G~~~~~~~~GHgiG--~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~ 237 (262)
T 1o0x_A 160 SHCIQETVESVGFNVIRDYVGHGVG--RELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVD 237 (262)
T ss_dssp HHHHHHHHHHTTCEECCSSCEEECS--SSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETT
T ss_pred HHHHHHHHHHcCCcccCCcccCccc--ccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceeecCCCceEEeeC
Confidence 99999999999996 8999999999 5999988 24799999999999998 2
Q ss_pred --cCeEEeeEEEEeecccccccceeeccC
Q psy3139 626 --CGIKIGQVIQVVPAYRERYMTMEVRSL 652 (708)
Q Consensus 626 --~GIRIEn~VlVte~~~~~~lgfE~LT~ 652 (708)
+|+||||+|+||++ |+|.||.
T Consensus 238 g~~gvriEdtvlVt~~------G~e~LT~ 260 (262)
T 1o0x_A 238 GSRCAHFEHTILITEN------GAEILTK 260 (262)
T ss_dssp CCCEEECBEEEEECSS------SEEESSC
T ss_pred CCcEEEEEEEEEECCC------ccEeCCC
Confidence 46789999999999 9999994
No 24
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=8.8e-43 Score=378.14 Aligned_cols=220 Identities=12% Similarity=0.087 Sum_probs=195.6
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCC----CCCCCccccccCCC
Q psy3139 423 DLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYI----GNSFPPTAAHGTHA 498 (708)
Q Consensus 423 ~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~----~~SF~tIva~G~Na 498 (708)
.+++|||++||+.||+|+++++.++.+++ +.+++| +||.|+++.+++++.+.+.+. +.+|++|+++|.|+
T Consensus 99 ~~~~IKs~~EIe~mR~A~~ia~~al~~~~----~~ikpG--vTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~ 172 (368)
T 3s6b_A 99 SDIYVNNEEEIQRIREACILGRKTLDYAH----TLVSPG--VTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNE 172 (368)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HTCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETT
T ss_pred CCceeCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCcc
Confidence 46899999999999999999888876655 566778 899999999988766554432 35799999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCG---IPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRL 574 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G---~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~l 574 (708)
+++||.|+ +++|++| +|++|+|++|.+|++|+||||++| +++++++++|++|++++.+++.+++| |+++.+|
T Consensus 173 ~i~H~~p~---~r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikP-G~~~~dI 248 (368)
T 3s6b_A 173 IVCHGIPD---YRPLKSGDIINIDISVFYKGVHSDLNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKP-GMFYKNI 248 (368)
T ss_dssp EEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCT-TCBTHHH
T ss_pred ccccCCCC---CccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccC-CCcHHHH
Confidence 99999985 7899999 999999999999999999999999 99999999999999999999887765 9999999
Q ss_pred HHHHHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--c----------------
Q psy3139 575 EYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--D---------------- 625 (708)
Q Consensus 575 D~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~---------------- 625 (708)
+.++++.+++.|+. +.|++||||| +++||.| ..+|+||||||||||+| .
T Consensus 249 ~~aa~~~i~~~G~~~~~~~~GHGIG--~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~d 326 (368)
T 3s6b_A 249 GTLIDAYVSKKNFSVVRSYSGHGVG--KLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSD 326 (368)
T ss_dssp HHHHHHHHHTTTCEECCSCCEEECS--SSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETT
T ss_pred HHHHHHHHHHcCCCcccceeeCCCC--ccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCcccccccCCCceeEeeC
Confidence 99999999999996 8999999999 5999988 13799999999999998 1
Q ss_pred --cCeEEeeEEEEeecccccccceeecc-CCCcccccc
Q psy3139 626 --CGIKIGQVIQVVPAYRERYMTMEVRS-LFPFESRLI 660 (708)
Q Consensus 626 --~GIRIEn~VlVte~~~~~~lgfE~LT-~vP~~~~lI 660 (708)
+|+||||+|+||++ |+|.|| ..|.+..++
T Consensus 327 G~~gvriEdtVlVTe~------G~EvLT~~~pk~~~~~ 358 (368)
T 3s6b_A 327 GKLSAQFEHTLLITNN------GVEILTKRTQDSPPLG 358 (368)
T ss_dssp CCCEEECBEEEEEETT------EEEETTCCCTTCCCCS
T ss_pred CccEEEEeEEEEEcCC------cCeECCCCCCCCcCce
Confidence 47999999999999 999999 466666655
No 25
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=2.3e-42 Score=370.68 Aligned_cols=217 Identities=14% Similarity=0.096 Sum_probs=193.4
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCC----CCCCCccccccCCC
Q psy3139 423 DLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYI----GNSFPPTAAHGTHA 498 (708)
Q Consensus 423 ~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~----~~SF~tIva~G~Na 498 (708)
.+|++||++||+.||+|+++++.++..++ +.+++| +||.|+++.+++.+.+.+.+. ..+|++|+++|.|+
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~----~~i~pG--vte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~ 144 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAA----GMIKPG--VTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNE 144 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HTCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHH----HHhhCC--CcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCC
Confidence 47999999999999999999988877655 456778 899999999988765554432 25799999999999
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYL 577 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~ 577 (708)
+++||.|+ +++|++| +|++|+|++|.+|++|+||||++|+++++++++|+.|++++.+++.+++| |+++.+|+.+
T Consensus 145 ~~~H~~p~---~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kP-G~~~~dI~~~ 220 (329)
T 2b3h_A 145 VICHGIPD---RRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKP-GVRYRELGNI 220 (329)
T ss_dssp EEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCT-TCBTTHHHHH
T ss_pred CcCCCCCC---CcCCCCCCEEEEEeeEEECCEEEeeEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHHHHH
Confidence 99999985 7899999 99999999999999999999999999999999999999999999988876 9999999999
Q ss_pred HHHHHHHcCCC-CCCCCceecCCCCccccCCC----------ccccCCcEEeeCCccc-c-------------------c
Q psy3139 578 LEQPLLALALD-YRPQRVHSIGEFLLVQEDFN----------STLNINFFGVVEPEYL-D-------------------C 626 (708)
Q Consensus 578 AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP~----------~~Le~GMV~SiEPGiY-~-------------------~ 626 (708)
+++.+++.|+. +.|++||||| +++||+|. .+|+||||||+|||+| . +
T Consensus 221 ~~~~~~~~G~~~~~~~~GHGIG--~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~ 298 (329)
T 2b3h_A 221 IQKHAQANGFSVVRSYCGHGIH--KLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKR 298 (329)
T ss_dssp HHHHHHHTTCEECCSCCEEECS--SSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCCC
T ss_pred HHHHHHHcCCCccCCcccCCcC--cccccCCcccccccCCCCCEECCCCEEEEeCCcCcCcccccccCCCceeEeeCCeE
Confidence 99999999996 8999999999 59999881 5799999999999998 1 5
Q ss_pred CeEEeeEEEEeecccccccceeeccC-C-Cccc
Q psy3139 627 GIKIGQVIQVVPAYRERYMTMEVRSL-F-PFES 657 (708)
Q Consensus 627 GIRIEn~VlVte~~~~~~lgfE~LT~-v-P~~~ 657 (708)
|+||||+|+||++ |+|.||. + |...
T Consensus 299 g~riEdtvlVTe~------G~evLT~~~~~k~~ 325 (329)
T 2b3h_A 299 SAQFEHTLLVTDT------GCEILTRRLDSARP 325 (329)
T ss_dssp EEECBEEEEECSS------SEEETTCCSSCSSC
T ss_pred EEEEeeEEEEcCC------eeEECCCCCCCCCC
Confidence 6999999999999 9999995 3 5554
No 26
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=2.2e-42 Score=355.82 Aligned_cols=211 Identities=13% Similarity=0.129 Sum_probs=184.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCC---CCC-CCCccccccCCCCCcc
Q psy3139 427 YKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSY---IGN-SFPPTAAHGTHATDAE 502 (708)
Q Consensus 427 iKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~---~~~-SF~tIva~G~NaAi~H 502 (708)
+||+.||+.||+|+.+... ++.++.+.+++| +||.|+++.++++..+.+.. .+. +|++++++|.|++++|
T Consensus 3 iKs~~Ei~~~r~A~~i~~~----~~~~~~~~i~~G--~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~~~~H 76 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAK----VRNTMQAATKPG--ITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAH 76 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHH----HHHHHHHHCCTT--CBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETTEEEC
T ss_pred CCCHHHHHHHHHHHHHHHH----HHHHHHHHCCCC--CcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCccccC
Confidence 8999999999999766554 455566778889 89999999998765443321 111 8999999999999999
Q ss_pred cCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCH-HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Q psy3139 503 YRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTP-LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQ 580 (708)
Q Consensus 503 y~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~-eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~ 580 (708)
|.|+ +++|++| ++++|+|++|.+|++|+||||++|++++ +++++|+.|++++.+++.+.+ ||+++.+++.++++
T Consensus 77 ~~p~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~k-pG~~~~~i~~~~~~ 152 (252)
T 1qxy_A 77 GIPS---KRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVK-PGTKLSNIGKAVHN 152 (252)
T ss_dssp CCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCC-TTCBTHHHHHHHHH
T ss_pred CCCC---CcCcCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHH
Confidence 9986 7899999 9999999999999999999999999999 999999999999999887775 59999999999999
Q ss_pred HHHHcCCC-CCCCCceecCCCCccccCC-----------CccccCCcEEeeCCcccc--------------------cCe
Q psy3139 581 PLLALALD-YRPQRVHSIGEFLLVQEDF-----------NSTLNINFFGVVEPEYLD--------------------CGI 628 (708)
Q Consensus 581 ~L~~~G~~-y~HGtGHGVG~~L~VHEgP-----------~~~Le~GMV~SiEPGiY~--------------------~GI 628 (708)
.+++.|+. +.|++||||| +++||+| +.+|+||||||+|||+|. +|+
T Consensus 153 ~~~~~g~~~~~~~~GHgiG--~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~ 230 (252)
T 1qxy_A 153 TARQNDLKVIKNLTGHGVG--LSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVA 230 (252)
T ss_dssp HHHHTTCEECTTCCEEECS--SSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEE
T ss_pred HHHHcCCEecCCccccccC--cccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcEE
Confidence 99999996 7999999999 5999998 247999999999999982 678
Q ss_pred EEeeEEEEeecccccccceeeccCCCcc
Q psy3139 629 KIGQVIQVVPAYRERYMTMEVRSLFPFE 656 (708)
Q Consensus 629 RIEn~VlVte~~~~~~lgfE~LT~vP~~ 656 (708)
||||+|+||++ | |.||..|.+
T Consensus 231 riEdtvlVt~~------G-e~Lt~~p~~ 251 (252)
T 1qxy_A 231 QIEHTVIVTKD------G-PILTTKIEE 251 (252)
T ss_dssp EEEEEEECCTT------C-CEETTCC--
T ss_pred EEEEEEEECCC------c-eEccCCCCC
Confidence 99999999999 9 999998875
No 27
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=2.2e-41 Score=363.99 Aligned_cols=223 Identities=13% Similarity=0.038 Sum_probs=192.9
Q ss_pred eCCchhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC----CCCCCCCcc
Q psy3139 416 TGPSPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS----YIGNSFPPT 491 (708)
Q Consensus 416 ~~~~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~----~~~~SF~tI 491 (708)
...++....|.|||++||+.||+|+.+...++..++ +.+++| +||.|+++.+++...+.+. ....+|+++
T Consensus 52 ~~~~~~~~~~~VKs~~EI~~mR~A~~i~~~a~~~~~----~~ikpG--~te~el~~~~~~~~~~~g~~~~~~~~~~fp~i 125 (337)
T 4fuk_A 52 KVYNIQFLHDDSKKTAEIQRIKTVCQLSREVLDIAT----AAAKPG--ITTDELDRIVHEATVERNMYPSPLNYYGFPKS 125 (337)
T ss_dssp CCCCCTTTTCTTC--CHHHHHHHHHHHHHHHHHHHH----HHCCTT--CBHHHHHHHHHHHHHHTTCEETTTTGGGCCSS
T ss_pred ccccchhhcccCCCHHHHHHHHHHHHHHHHHHHHHH----HHccCC--CCHHHHHHHHHHHHHHcCCCccCCCCCCcCce
Confidence 344667788999999999999999988877765544 567789 8999999888765433322 234789999
Q ss_pred ccccCCCCCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy3139 492 AAHGTHATDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSS 570 (708)
Q Consensus 492 va~G~NaAi~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~ 570 (708)
+++|.|++++||.|+ +++|++| ++++|+|+.|.+|++|+||||++|+++++++++|+.|++++.+++.+++| |++
T Consensus 126 v~~g~n~~~~H~~~~---~~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kp-G~~ 201 (337)
T 4fuk_A 126 VCTSVNEVICHGIPD---SRELEEGDILNIDVSSYLNGFHGDLNETVFIGRPDDDSVRLVHAAYECLCAGIGVVKP-EAL 201 (337)
T ss_dssp SEEEETTEEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHHTTCST-TCB
T ss_pred eeccccccccCCCCC---CccccCCCEEEEecceeECCEEEeeeeeEEeCCccHHHHHHHHHHHHHHHHHHhhccc-ccc
Confidence 999999999999986 7899999 99999999999999999999999999999999999999999998877765 999
Q ss_pred hHHHHHHHHHHHHHcCCC-CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--c------------
Q psy3139 571 LHRLEYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--D------------ 625 (708)
Q Consensus 571 g~~lD~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~------------ 625 (708)
..+++.++++.+.+.|+. |.|.+||||| +.+||.| ..+|+||||||||||+| .
T Consensus 202 ~~di~~~~~~~~~~~g~~~~~~~~GHGIG--~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~wt~ 279 (337)
T 4fuk_A 202 YKQVGDAIEACASQYQCSVVRTYTGHGVG--HLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDKWTS 279 (337)
T ss_dssp TTHHHHHHHHHHHTTTCEECSSEEEEECS--SSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEEECTTSSCE
T ss_pred HHHHHHHHHHHHHHhcCCcccCcccCCCC--CccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCCCeE
Confidence 999999999999999985 7999999999 4899987 14799999999999999 1
Q ss_pred ------cCeEEeeEEEEeecccccccceeeccCCCcc
Q psy3139 626 ------CGIKIGQVIQVVPAYRERYMTMEVRSLFPFE 656 (708)
Q Consensus 626 ------~GIRIEn~VlVte~~~~~~lgfE~LT~vP~~ 656 (708)
+|+||||+|+||++ |+|.||..|-.
T Consensus 280 ~t~dg~~gvriEd~VlVTe~------G~EvLT~~p~~ 310 (337)
T 4fuk_A 280 TTKDGRRSAQFEHTMVVTNG------GVEIFTDWVDG 310 (337)
T ss_dssp EETTCCCEEECBEEEEECSS------SEEESSCCSSS
T ss_pred EecCCceEEEeccEEEEcCC------cCEECCCCCCC
Confidence 38999999999999 99999987744
No 28
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=3e-35 Score=323.27 Aligned_cols=234 Identities=12% Similarity=0.082 Sum_probs=194.4
Q ss_pred hhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhc---------CCCCCCCCCc
Q psy3139 420 PVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEH---------WSYIGNSFPP 490 (708)
Q Consensus 420 pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~---------~~~~~~SF~t 490 (708)
-+..+|++||+.||+.||+|+.+...+ +.++.+.+++| +||.|+++.++++..+. +.+.+.+|++
T Consensus 12 ~v~~~r~iKs~~EI~~mR~A~~i~~~~----l~~~~~~ikpG--vte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~ 85 (401)
T 2q8k_A 12 DEQQEQTIAEDLVVTKYKMGGDIANRV----LRSLVEASSSG--VSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPT 85 (401)
T ss_dssp --CCCCCTTSHHHHHHHHHHHHHHHHH----HHHHHHHCC-C--CBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEE
T ss_pred cHHHHHhcCCHHHHHHHHHHHHHHHHH----HHHHHHhccCC--CcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCc
Confidence 367799999999999999997665544 55566778889 89999999887753321 2245567877
Q ss_pred cccccCCCCCcccCCCCC-CCccccCC-eEEEEeecccCCcccceeeEEecC-----CCCHHHHHHHHHHHHHHHHHHHh
Q psy3139 491 TAAHGTHATDAEYRPDAK-TNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCG-----IPTPLQRSVYTAILKGLIALVTT 563 (708)
Q Consensus 491 Iva~G~NaAi~Hy~p~~~-t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G-----~pt~eqr~~yt~VLka~ial~~a 563 (708)
+++ .|++++||.|.+. ++++|++| +|+||+|++|.||++|+||||++| +++++++++|+++++++.+++.+
T Consensus 86 ~vS--~N~~v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~ 163 (401)
T 2q8k_A 86 SIS--VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRL 163 (401)
T ss_dssp EEE--ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEe--CCcccccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 664 7999999999533 35899999 999999999999999999999999 89999999999999999999988
Q ss_pred cCCCCCchHHHHHHHHHHHHHcCCC-CCCCCceecCCCCccccCCC----------------ccccCCcEEeeCCccc--
Q psy3139 564 QFLPGSSLHRLEYLLEQPLLALALD-YRPQRVHSIGEFLLVQEDFN----------------STLNINFFGVVEPEYL-- 624 (708)
Q Consensus 564 ~fp~G~~g~~lD~~AR~~L~~~G~~-y~HGtGHGVG~~L~VHEgP~----------------~~Le~GMV~SiEPGiY-- 624 (708)
++| |+++.+|+.++++.+++.|+. +.|.+||||| +.+||+|. .+|+||||||||||+|
T Consensus 164 ~kP-G~~~~dI~~ai~~~~~~~G~~~v~~~~GHGIG--~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G 240 (401)
T 2q8k_A 164 VKP-GNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLK--QHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSG 240 (401)
T ss_dssp CST-TCBHHHHHHHHHHHHHTTTCEECTTCEEEEEB--TTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESS
T ss_pred hCC-CCcHHHHHHHHHHHHHHcCCeecCCcccccCC--CccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEec
Confidence 876 999999999999999999984 5678999999 58999983 2799999999999997
Q ss_pred -------c----c------------------------------------------------------------------C
Q psy3139 625 -------D----C------------------------------------------------------------------G 627 (708)
Q Consensus 625 -------~----~------------------------------------------------------------------G 627 (708)
. . |
T Consensus 241 ~g~v~~~~~~~t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg 320 (401)
T 2q8k_A 241 EGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEG 320 (401)
T ss_dssp CCCCEECSCCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTT
T ss_pred CCEEEECCCCceEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCC
Confidence 1 0 2
Q ss_pred ---eEEeeEEEEeecccccccceeeccCCCccccccccc-cCCHHHH
Q psy3139 628 ---IKIGQVIQVVPAYRERYMTMEVRSLFPFESRLIDTS-QLEPHEI 670 (708)
Q Consensus 628 ---IRIEn~VlVte~~~~~~lgfE~LT~vP~~~~lId~~-~Lt~~e~ 670 (708)
.++|.+|+||++ |.|.||..|+++..+..+ -++++||
T Consensus 321 ~~~Aq~EhTvlvt~~------G~eilT~~~~~~~~~~s~~~~~d~e~ 361 (401)
T 2q8k_A 321 EFVAQFKFTVLLMPN------GPMRITSGPFEPDLYKSEMEVQDAEL 361 (401)
T ss_dssp CCEEEEEEEEEEETT------EEEECCCCCCCGGGBCCSCCCCCHHH
T ss_pred CEEEEEEEEEEECCC------CcEEecCCCCCHhhccCCCccCcHHH
Confidence 589999999999 999999999988776543 3455665
No 29
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=2.9e-33 Score=295.90 Aligned_cols=191 Identities=14% Similarity=0.128 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCCCCCCCCCccccccCCCCCcccCCCCCCC
Q psy3139 431 AEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWSYIGNSFPPTAAHGTHATDAEYRPDAKTN 510 (708)
Q Consensus 431 ~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~~~~~SF~tIva~G~NaAi~Hy~p~~~t~ 510 (708)
+||+.||+|+.+.+.++..++ +.+++| +||.|+++.++++..+.+.. ++|+++++ .|++++||.|+..++
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~----~~i~pG--~te~el~~~~~~~~~~~G~~--~~fp~~vs--~n~~~~H~~p~~~~~ 70 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAI----KLARPG--MLLLELAESIEKMIMELGGK--PAFPVNLS--INEIAAHYTPYKGDT 70 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH----HHCCTT--CBHHHHHHHHHHHHHHTTCE--ESSCCEEE--ETTEEECCCCCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHH----HHCCCC--CCHHHHHHHHHHHHHHcCCC--CCCCcEEe--eCCccccccCCCCCC
Confidence 489999999988888776655 456778 89999999999876655443 79998875 578889999976567
Q ss_pred ccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC-
Q psy3139 511 VKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD- 588 (708)
Q Consensus 511 ~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~- 588 (708)
++|++| ++++|+|++|.||++|+||||++|+ +++++|+.+++++.+++.+++| |+++.+++.++++.+++.|+.
T Consensus 71 ~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~---~~~~l~~~~~~a~~~~i~~~kp-G~~~~dI~~a~~~~~~~~G~~~ 146 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM---EEDELMEAAKEALNAAISVARA-GVEIKELGKAIENEIRKRGFKP 146 (295)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEEEEETTS---CCCHHHHHHHHHHHHHHHHCST-TCBTHHHHHHHHHHHHTTTCEE
T ss_pred ccccCCCEEEEEEeEEECCEEEEEEEEEEeCH---HHHHHHHHHHHHHHHHHHHhCC-CCcHHHHHHHHHHHHHHCCCeE
Confidence 999999 9999999999999999999999998 7889999999999999988876 999999999999999999996
Q ss_pred CCCCCceecCCCCccccCC----------CccccCCcEEeeCCccc--ccCeEEeeEEEE
Q psy3139 589 YRPQRVHSIGEFLLVQEDF----------NSTLNINFFGVVEPEYL--DCGIKIGQVIQV 636 (708)
Q Consensus 589 y~HGtGHGVG~~L~VHEgP----------~~~Le~GMV~SiEPGiY--~~GIRIEn~VlV 636 (708)
+.|++|||||. +++||+| ..+|+||||||||||+| .++||+||..-|
T Consensus 147 ~~~~~GHgIG~-l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~i 205 (295)
T 1xgs_A 147 IVNLSGHKIER-YKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLI 205 (295)
T ss_dssp CTTCCEEECBT-TBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEEEEEEEE
T ss_pred ECCCcCCCCCC-cccCCCCcCCccCCCCCCCEeCCCCEEEEcceeECCCCEEEECCceEE
Confidence 79999999996 6999987 24799999999999999 788999985433
No 30
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=9.4e-33 Score=308.01 Aligned_cols=198 Identities=13% Similarity=0.153 Sum_probs=166.4
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhh----cCCCCCCCCCccccccCCC
Q psy3139 423 DLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGE----HWSYIGNSFPPTAAHGTHA 498 (708)
Q Consensus 423 ~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~----~~~~~~~SF~tIva~G~Na 498 (708)
++.++||+.||+.||+|+.+...++ .++...+++| +||.|+++.++..... .+...+.+|+++++. |.
T Consensus 156 R~i~iKs~~EIe~mR~A~~Ia~~al----~~~~~~ikpG--vTe~ELa~~le~~~~~~i~~~Ga~~g~~FP~ivSv--N~ 227 (478)
T 1b6a_A 156 KALDQASEEIWNDFREAAEAHRQVR----KYVMSWIKPG--MTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSL--NN 227 (478)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHH----HHHHHHCCTT--SBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEE--TT
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHH----HHHhhhcCCC--CcHHHHHHHHHHHHHHHHHhcCCcccCCCCeEEEC--CC
Confidence 3344599999999999987765554 4555678889 8999999888865332 232245789998754 88
Q ss_pred CCcccCCCCCCCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHH
Q psy3139 499 TDAEYRPDAKTNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYL 577 (708)
Q Consensus 499 Ai~Hy~p~~~t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~ 577 (708)
+++||.|+..++++|++| +|+||+|++|.||++|+||||++| ++++++|+++++++.+++.+++| |+++.+|+.+
T Consensus 228 ~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg---~e~~~L~eav~eA~~aaI~~~kP-G~~~~dI~~a 303 (478)
T 1b6a_A 228 CAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN---PKYDTLLKAVKDATNTGIKCAGI-DVRLCDVGEA 303 (478)
T ss_dssp EEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHH
T ss_pred ccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 899999975445899999 999999999999999999999996 78999999999999999888765 9999999999
Q ss_pred HHHHHHHcCCC----------CCCCCceecCCCCccccCC---------CccccCCcEEeeCCccc-ccCeEEeeE
Q psy3139 578 LEQPLLALALD----------YRPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL-DCGIKIGQV 633 (708)
Q Consensus 578 AR~~L~~~G~~----------y~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY-~~GIRIEn~ 633 (708)
+++.+++.|+. ++|++|||||- +.+||+| ..+|+||||||||||+| ..|+|+||+
T Consensus 304 i~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGG-l~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~G~G~~~ed~ 378 (478)
T 1b6a_A 304 IQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQ-YRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDM 378 (478)
T ss_dssp HHHHHHTCEEEETTEEEECEECTTCEEEEEBT-TBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEESSCSCCEECS
T ss_pred HHHHHHHcCCCcccccccceeecCcceeCCCC-ccccCCCccceecCCCCCEeCCCCEEEEeCeeECCCCEEEECC
Confidence 99999999974 78999999941 6999976 25899999999999999 569999985
No 31
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=99.97 E-value=6.7e-31 Score=284.75 Aligned_cols=192 Identities=12% Similarity=0.167 Sum_probs=162.2
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhhcCC---CCCCCCCccccccCCCCCcc
Q psy3139 426 AYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQLRGEHWS---YIGNSFPPTAAHGTHATDAE 502 (708)
Q Consensus 426 aiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~r~~~~~---~~~~SF~tIva~G~NaAi~H 502 (708)
...|++||+.||+|+.+...++ .++.+.+++| +||.|+++.+++..++..+ +.+.+|++++ |.|++++|
T Consensus 40 ~~~s~~EI~~mR~A~~I~~~a~----~~~~~~ikpG--~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~--s~N~~~~H 111 (360)
T 2nw5_A 40 NFTESDILQDARRAAEAHRRAR----YRVQSIVRPG--ITLLEIVRSIEDSTRTLLKGERNNGIGFPAGM--SMNSCAAH 111 (360)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHH----HHHHHHCCTT--CBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEE--EETTEEEC
T ss_pred hhCCHHHHHHHHHHHHHHHHHH----HHHHHhccCC--CCHHHHHHHHHHHHHHhcCCCccCccccCcee--eccccccC
Confidence 4459999999999986665554 4555678889 8999999999875433322 3467899874 78999999
Q ss_pred cCCCCCC-CccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHH
Q psy3139 503 YRPDAKT-NVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQ 580 (708)
Q Consensus 503 y~p~~~t-~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~ 580 (708)
|.|+..+ +++|++| +|+||+|++|.||++|+||||++| ++++++|++|++|+.+++.++.| |++..+++.++++
T Consensus 112 ~~P~~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~---~~~~~l~~av~eA~~aai~~~kP-Gv~~~dI~~ai~~ 187 (360)
T 2nw5_A 112 YTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK---ENLEPLLVAAREGTETGIKSLGV-DVRVCDIGRDINE 187 (360)
T ss_dssp CCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC---GGGHHHHHHHHHHHHHHHHHCCT-TCBHHHHHHHHHH
T ss_pred CCCCcccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC---HHHHHHHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHH
Confidence 9997544 6899999 999999999999999999999994 68999999999999998888765 9999999999999
Q ss_pred HHHHcCC----------CCCCCCceecCCCCccccCC---------CccccCCcEEeeCCccc--ccCeEE
Q psy3139 581 PLLALAL----------DYRPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL--DCGIKI 630 (708)
Q Consensus 581 ~L~~~G~----------~y~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY--~~GIRI 630 (708)
.+.+.|+ .+.|.+|||||.+ .+||+| +.+|+||||||||||+| .+|||-
T Consensus 188 vi~~~G~~~~g~~~~~~~v~~~~GHgIG~y-~iHe~P~I~~~~~~~~~~Le~GmV~aIEP~i~~G~G~Vr~ 257 (360)
T 2nw5_A 188 VISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGDSFYAVETFATTGKGSIDD 257 (360)
T ss_dssp HHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSSEEEEEEEEEESSCSCCEE
T ss_pred HHHHcCCccccccccccccCCeeEeeecCc-eeccCCEeccccCCCCcEEeCCcEEEEeceEECCcceEEe
Confidence 9999985 2579999999932 899999 24799999999999999 788983
No 32
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=99.92 E-value=4.8e-25 Score=238.95 Aligned_cols=191 Identities=12% Similarity=0.150 Sum_probs=150.2
Q ss_pred hHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-Hhhc--CCCCCCCCCccccccCC
Q psy3139 421 VKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVLECVDQL-RGEH--WSYIGNSFPPTAAHGTH 497 (708)
Q Consensus 421 I~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva~~l~~~-r~~~--~~~~~~SF~tIva~G~N 497 (708)
...+|.+|+++||+.||+|+.+...+ +.++.+.+++| +||.|+++.++++ |... +.+.+.+||++++ .|
T Consensus 33 ~~~~~~~~~~d~l~~~R~Aa~I~~~v----~~~~~~~ikpG--~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciS--vN 104 (358)
T 3fm3_A 33 NMEIENFTESDILQDARRAAEAHRRA----RYRVQSIVRPG--ITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMS--MN 104 (358)
T ss_dssp SCEECCCCCCHHHHHHHHHHHHHHHH----HHHHHHHCCTT--CBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEE--ET
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHH----HHHHHHhCCCC--CcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEe--eC
Confidence 46799999999999999998666544 55667788899 9999999999875 3322 3345678987554 57
Q ss_pred CCCcccCCCCC-CCccccCC-eEEEEeecccCCcccceeeEEecCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCchHHHH
Q psy3139 498 ATDAEYRPDAK-TNVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPLQRSVYTAILKGLIALVTTQFLPGSSLHRLE 575 (708)
Q Consensus 498 aAi~Hy~p~~~-t~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~eqr~~yt~VLka~ial~~a~fp~G~~g~~lD 575 (708)
..++||.|... ++++|++| +|+||+|++|.||++|+|||+.+|+..++..+. +.+++.+.+.++. +|++..++.
T Consensus 105 ~~v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~~~~~l~~~---~~~al~aai~~~~-pG~~~~dig 180 (358)
T 3fm3_A 105 SCAAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKENLEPLLVA---AREGTETGIKSLG-VDVRVCDIG 180 (358)
T ss_dssp TEEECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGGGHHHHHH---HHHHHHHHHHHCC-TTCBHHHHH
T ss_pred CEEEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccccchhHHHH---HHHHHHHHHHhhh-cCCcccccc
Confidence 88899998643 47899999 999999999999999999999999877665544 4455555555555 499999999
Q ss_pred HHHHHHHHHcCCC----------CCCCCceecCCCCccccCC---------CccccCCcEEeeCCccc
Q psy3139 576 YLLEQPLLALALD----------YRPQRVHSIGEFLLVQEDF---------NSTLNINFFGVVEPEYL 624 (708)
Q Consensus 576 ~~AR~~L~~~G~~----------y~HGtGHGVG~~L~VHEgP---------~~~Le~GMV~SiEPGiY 624 (708)
.++++...+.|+. +.+-+|||||.+ ..||.| ...|+|||||+|||.+.
T Consensus 181 ~ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~-~~he~~~ip~~~~~~~~~le~GmV~tIEP~is 247 (358)
T 3fm3_A 181 RDINEVISSYEVEIGGRMWPIRPISDLHGHSISQF-RIHGGISIPAVNNRDTTRIKGDSFYAVETFAT 247 (358)
T ss_dssp HHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTT-BSCCSCEECSSCCCCCCBCCSSEEEEEEEEEE
T ss_pred HHHHHHHhhccceeccccccccccccccccccCCc-cccCCCccCccCCCCCcEEeeeeeEEeeeeee
Confidence 9999988887742 356689999973 467766 25799999999999874
No 33
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.86 E-value=3.8e-22 Score=187.21 Aligned_cols=127 Identities=13% Similarity=0.229 Sum_probs=106.7
Q ss_pred cCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEe-CCccE
Q psy3139 38 SDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVT-QTTAV 116 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt-~~~a~ 116 (708)
..+.+||++||+.|+++++||+||++ +| +++|||||+||+|.+||| +++++
T Consensus 8 ~~~~~Rl~~l~~~m~~~~~da~li~~--~~--------------------------n~~yltGf~~s~g~lvv~~~~~a~ 59 (135)
T 3qoc_A 8 TRFLQRRRALSAQLAAKRIDAMLVTH--LT--------------------------HIRYLSGFTGSNAALIINKDLSAR 59 (135)
T ss_dssp CHHHHHHHHHHHTHHHHTCSEEEECC--HH--------------------------HHHHHHCCCSSCCEEEEETTSCEE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEcC--hh--------------------------hCeeeecccCCCeEEEEeeCCccE
Confidence 45789999999999999999999963 23 599999999999999999 89999
Q ss_pred EEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhc
Q psy3139 117 LWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHA 196 (708)
Q Consensus 117 l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 196 (708)
||||+||++||++|++ +|+++.. + +..+||+++.
T Consensus 60 l~td~Ry~~qA~~~~~--~~~i~~~---------------------------------------~-----~~~~~l~~~~ 93 (135)
T 3qoc_A 60 ISTDGRYITQIAEQVP--DIESLMA---------------------------------------R-----NCAPALLSDI 93 (135)
T ss_dssp EEECGGGHHHHHHHCT--TSEEEEC---------------------------------------S-----SHHHHHHHTC
T ss_pred EEeCcHHHHHHHHhCC--CcEEEEe---------------------------------------C-----cHHHHHHhcC
Confidence 9999999999999997 3888764 2 3468998877
Q ss_pred cCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 197 KYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 197 ~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
+.+++||+|+..+|++.|++|++.+.. +++++++ .++|+.++
T Consensus 94 ~~~~~vG~e~~~ls~~~~~~L~~~l~~-~~~lv~~-~~~v~~lR 135 (135)
T 3qoc_A 94 NGPKRVGFEADYLSVSQCEELRKSAGS-DVELIPV-TGAIEKLR 135 (135)
T ss_dssp CSSEEEEEETTTSBHHHHHHHHHHSCT-TEEEEEE-CSCC----
T ss_pred cCCCeEEECCCcccHHHHHHHHHhccC-CcEEEEC-ccHHHHhC
Confidence 778899999999999999999998853 4788887 58888763
No 34
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.81 E-value=6.7e-20 Score=170.67 Aligned_cols=124 Identities=19% Similarity=0.322 Sum_probs=104.1
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCccEEE
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTTAVLW 118 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~a~l~ 118 (708)
.+.+||++||+.|+++++||+||++. .+++|+|||+|++|.+|||+++++||
T Consensus 7 ~~~~Rl~~l~~~m~~~~~da~li~~~----------------------------~n~~YltGf~~~~~~~vv~~~~~~l~ 58 (132)
T 3ovk_A 7 FLEQRLGHCLRQMAEKGLEALLVTHL----------------------------TNSYYLTGFSGTAATVLITAKRRVLI 58 (132)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECSH----------------------------HHHHHHHCCCCSCCEEEEESSCEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEcCc----------------------------ccceeeeCccCCCEEEEEECCccEEE
Confidence 36799999999999999999999763 26999999999999999999999999
Q ss_pred eccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhcc-
Q psy3139 119 TEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAK- 197 (708)
Q Consensus 119 td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 197 (708)
||+||++||++|+++ |+++.. +. .. +|+++.++
T Consensus 59 td~ry~~qa~~~~~~--~~v~~~---------------------------------------~~----~~-~~l~~~l~~ 92 (132)
T 3ovk_A 59 TDSRYTLLAKASVEG--FDIIES---------------------------------------RT----PL-KVVAELLEA 92 (132)
T ss_dssp ECTTTHHHHHHHCTT--CEEEEC---------------------------------------SC----HH-HHHHHHHHH
T ss_pred ECchhHHHHHHhCCC--cEEEEe---------------------------------------CC----CH-HHHHHHHHH
Confidence 999999999999975 777654 11 12 55555554
Q ss_pred -CCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 198 -YTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 198 -~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
..++||+|+. +|+..|+.|++.+. +++++++ .++|+.++
T Consensus 93 ~~~~~ig~e~~-~~~~~~~~L~~~l~--~~~~v~~-~~~v~~lR 132 (132)
T 3ovk_A 93 DQIDCLGFEDQ-VSFSFYQAMQAELS--GITLLAQ-SGFVEHLR 132 (132)
T ss_dssp HTCCEEEEETT-SBHHHHHHHHHHCT--TCEEEEE-SSTTGGGC
T ss_pred cCCCEEEEcCC-CCHHHHHHHHhhCC--CCeEEEC-chHHHHhC
Confidence 4689999999 99999999999874 5788888 68998874
No 35
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.80 E-value=7.3e-20 Score=169.13 Aligned_cols=124 Identities=15% Similarity=0.321 Sum_probs=106.3
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCccEEE
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTTAVLW 118 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~a~l~ 118 (708)
++++||++||+.|+++|+||+||++. .+++|+|||+|++|.++||+++++||
T Consensus 3 ~~~~Rl~~lr~~m~~~~~da~li~~~----------------------------~ni~YltGf~~~~~~llv~~~~~~l~ 54 (131)
T 3il0_A 3 AMQRRLERFDAKLVQSGLDALLVTGQ----------------------------NNIYYLTDFWGTNATVFITKNRRLFL 54 (131)
T ss_dssp CGGGHHHHHHHHHHHHTCSEEEECSH----------------------------HHHHHHHSCCCSSEEEEEESSCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEecc----------------------------cccEEEeCcccCCeEEEEECCCCEEE
Confidence 46789999999999999999999764 26999999999999999999999999
Q ss_pred eccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhccC
Q psy3139 119 TEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAKY 198 (708)
Q Consensus 119 td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 198 (708)
||+||++||++|+++ ++++.. ++..+||++.++.
T Consensus 55 ~d~r~~~~a~~~~~~--~~v~~~--------------------------------------------~~~~~~l~~~l~~ 88 (131)
T 3il0_A 55 TDSRYTLIAKQSVHG--FDIIES--------------------------------------------KDPLKDIVKFVEV 88 (131)
T ss_dssp ECTTSHHHHHHHCCS--SEEEEC--------------------------------------------SCHHHHHHHHHHH
T ss_pred ECchhHHHHHHhCCC--cEEEEe--------------------------------------------CCHHHHHHHHHHh
Confidence 999999999999864 666542 2457888877665
Q ss_pred C--CeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 199 T--DKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 199 ~--~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
. ++||+|+. +++..|+.|++.+. ++++++. .++|+.++
T Consensus 89 ~~~~~ig~e~~-~~~~~~~~L~~~~~--~~~~v~~-~~~v~~lR 128 (131)
T 3il0_A 89 DKLETIGFDNQ-VSFAYYQALQAIFE--GYTLSPQ-TNFMEELR 128 (131)
T ss_dssp TTCCEEEEETT-SCHHHHHHHHHHTT--TSEEEEE-SSHHHHHH
T ss_pred cCCCEEEEcCC-CCHHHHHHHHhhcC--CCEEEEC-chHHHHhc
Confidence 4 79999999 99999999998873 6788887 68998876
No 36
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.73 E-value=8.1e-18 Score=156.53 Aligned_cols=126 Identities=15% Similarity=0.186 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCce----EEEEeCC-c
Q psy3139 40 VNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESG----QGVVTQT-T 114 (708)
Q Consensus 40 ~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g----~~~vt~~-~ 114 (708)
..+||++||+.|+++|+||+||++. .+++|||||+|++| .++|+++ +
T Consensus 3 ~~~Rl~~lr~~m~~~~~da~li~~~----------------------------~ni~yltGf~g~~~er~~~lli~~~g~ 54 (138)
T 3pn9_A 3 AMSKLQQILTYLESEKLDVAVVSDP----------------------------VTINYLTGFYSDPHERQMFLFVLADQE 54 (138)
T ss_dssp SCCHHHHHHHHHHHHTCSEEEECCH----------------------------HHHHHHHSCCCCCTTSCCEEEEESSSC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCc----------------------------CceeeecCCCCCCccceEEEEEeCCCC
Confidence 3579999999999999999999754 26999999999997 8999988 8
Q ss_pred cEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHH
Q psy3139 115 AVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIAT 194 (708)
Q Consensus 115 a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (708)
++||||+||.+||+ |..+ +++... . +..+..+|+++
T Consensus 55 ~~l~~d~~~~~~a~-~~~~--~~v~~~---------------------------------------~--~~~~~~~~l~~ 90 (138)
T 3pn9_A 55 PLLFVPALEVERAS-STVS--FPVVGY---------------------------------------V--DSENPWQKIKH 90 (138)
T ss_dssp CEEEEEGGGHHHHH-HHCS--SCEEEE---------------------------------------C--TTSCHHHHHHH
T ss_pred EEEEEeccchhhhh-ccCC--CcEEEE---------------------------------------c--CCCCHHHHHHH
Confidence 99999999999999 8765 444432 0 11356789988
Q ss_pred hccC--CCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 195 HAKY--TDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 195 ~~~~--~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
.++. .++||+|+..+++..|+.|.+.+. +.++++. .++|+.++
T Consensus 91 ~l~~~~~~~vg~e~~~~~~~~~~~l~~~~~--~~~~v~~-~~~i~~lR 135 (138)
T 3pn9_A 91 ALPQLDFKRVAVEFDNLILTKYHGLKTVFE--TAEFDNL-TPRIQRMR 135 (138)
T ss_dssp HSCCCCCCEEEECTTTCCHHHHHHHHHHST--TCEEEEC-HHHHHHHT
T ss_pred HHHhccCCeEEEecCcCCHHHHHHHHHHCC--CCeeeeh-HHHHHHHh
Confidence 8876 579999999999999999998774 5688887 68898875
No 37
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.70 E-value=2.9e-17 Score=153.85 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=99.8
Q ss_pred HHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCce----EEEEeCC-ccEE
Q psy3139 43 RLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESG----QGVVTQT-TAVL 117 (708)
Q Consensus 43 rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g----~~~vt~~-~a~l 117 (708)
|+++||+.|+++|+||+||++. .+++|+|||+|++| .+||+++ +++|
T Consensus 5 Rl~~l~~~m~~~glDa~li~~~----------------------------~ni~YlTGf~~~~~er~~~llv~~~g~~~l 56 (140)
T 3i7m_A 5 KLEQIQQWTAQHHASMTYLSNP----------------------------KTIEYLTGFGSDPIERVLALVVFPDQDPFI 56 (140)
T ss_dssp HHHHHHHHHHHTTCSEEEECCH----------------------------HHHHHHHCCCCCCCSSCCEEEECSSSCCEE
T ss_pred HHHHHHHHHHHcCCCEEEECCC----------------------------CcceeecCCCCCCccceEEEEEeCCCCEEE
Confidence 9999999999999999999743 26999999999998 8999987 7999
Q ss_pred EeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhcc
Q psy3139 118 WTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAK 197 (708)
Q Consensus 118 ~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 197 (708)
|||+||.+||++++.+.++..... ..+..+++++.++
T Consensus 57 ~~~~~~~~~a~~~~~~~~i~~~~d-------------------------------------------~~~~~~~l~~~l~ 93 (140)
T 3i7m_A 57 FAPALEVEVIKETGWQFPVIGYLD-------------------------------------------HENPWAMIADQVK 93 (140)
T ss_dssp EEEGGGHHHHHTTTCCSCEEEECT-------------------------------------------TSCHHHHHHHHHH
T ss_pred EEecccHHHHHhccCcCcEEEEcC-------------------------------------------CCCHHHHHHHHHH
Confidence 999999999999986544333321 1345567766654
Q ss_pred C----CCeEEECCCcccHHHHHHHHHHHHhCCCEEE-ecchhhhhhhc
Q psy3139 198 Y----TDKIASDPLKWEFSEWLNLDNYLRAHGLQLN-LLTENLVDSIW 240 (708)
Q Consensus 198 ~----~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~lv~~~~ 240 (708)
. .++||+|+..+++..++.|++.+. +.+++ +. .++|+.++
T Consensus 94 ~~~~~~~~ig~e~~~~~~~~~~~L~~~l~--~~~~v~~~-~~~i~~lR 138 (140)
T 3i7m_A 94 QRHVNPEHVAIEKGQLQVARMEALAAQFS--APSFDLDI-TSFIEHMR 138 (140)
T ss_dssp HTTCCCSEEEECTTTSCHHHHHHHHTTSS--SCEEEEEC-HHHHHHC-
T ss_pred HhCCCCCeEEEccCCCCHHHHHHHHHHCC--CCEEecCH-HHHHHHHH
Confidence 3 489999999999999999998764 56888 87 68888875
No 38
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.70 E-value=7.2e-17 Score=149.71 Aligned_cols=123 Identities=15% Similarity=0.158 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCce----EEEEeCC-ccE
Q psy3139 42 QRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESG----QGVVTQT-TAV 116 (708)
Q Consensus 42 ~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g----~~~vt~~-~a~ 116 (708)
+|+++||+.|+++|+||+||++. + +++|+|||+|++| .++|+++ +++
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~--~--------------------------ni~YlTGf~~~~~er~~~l~v~~~g~~~ 54 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDP--V--------------------------TVNYLTGFFCDPHERQMFLFVYEDRDPI 54 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCH--H--------------------------HHHHHHSCCCCCTTSCCEEEEESSSCCE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCc--c--------------------------hHHHHhCCCCCCCcceEEEEEeCCCCEE
Confidence 69999999999999999999643 2 5999999999997 8899987 699
Q ss_pred EEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhc
Q psy3139 117 LWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHA 196 (708)
Q Consensus 117 l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 196 (708)
||||+||.+||+++. +.++..... ..+..+||++.+
T Consensus 55 l~~~~~y~~~a~~~~-~~~v~~~~d-------------------------------------------~~~~~~~l~~~l 90 (132)
T 3ooo_A 55 LFVPALEVSRAKQSV-PFPVFGYID-------------------------------------------SENPWQKIASNL 90 (132)
T ss_dssp EEEEGGGHHHHHHHC-SSCEEEECT-------------------------------------------TSCHHHHHHHHC
T ss_pred EEEeccchHHHHhcC-CCcEEEEeC-------------------------------------------CCCHHHHHHHHH
Confidence 999999999999987 433332221 236678999888
Q ss_pred cCC--CeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 197 KYT--DKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 197 ~~~--~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
+.. ++||+|+..+|+..++.|++.+. .++++. .++|+.++
T Consensus 91 ~~~~~~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~-~~~v~~lR 132 (132)
T 3ooo_A 91 PSFSVSKVLAEFDNLNVTKFQGLQTVFD---GHFENL-TPYIQNMR 132 (132)
T ss_dssp SCCCCSEEEECTTTCCHHHHHHHHHHCC---SEEEEC-CHHHHTTC
T ss_pred hhccCCeEEEecCCcCHHHHHHHHHhCC---cceech-HHHHHhcC
Confidence 763 58999999999999999998773 688887 57888763
No 39
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.69 E-value=7.4e-17 Score=149.77 Aligned_cols=124 Identities=19% Similarity=0.198 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCce----EEEEeCC-cc
Q psy3139 41 NQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESG----QGVVTQT-TA 115 (708)
Q Consensus 41 ~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g----~~~vt~~-~a 115 (708)
++|+++||+.|+++|+||+||++. + +++|+|||+|++| .++|+++ ++
T Consensus 2 ~~Rl~~l~~~m~~~glDa~li~~~--~--------------------------ni~YltGf~~~~~er~~~l~v~~~g~~ 53 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKGAELAIFSDP--V--------------------------TINYLTGFFCDPHERQLFLFVYHDLAP 53 (132)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECCH--H--------------------------HHHHHHSCCCCCTTSCCEEEEESSSCC
T ss_pred hHHHHHHHHHHHHCCCCEEEEcCc--c--------------------------hhhHhhCCCCCCccceEEEEEeCCCCE
Confidence 379999999999999999999643 2 5999999999997 8999987 79
Q ss_pred EEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHh
Q psy3139 116 VLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATH 195 (708)
Q Consensus 116 ~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (708)
+||||+||.+||+++. +.++.... +.++..++|++.
T Consensus 54 ~l~~~~~y~~~a~~~~-~~~i~~~~-------------------------------------------d~~~~~~~l~~~ 89 (132)
T 3o5v_A 54 VLFVPALEVARASQAI-SFPVFGYV-------------------------------------------DSENPWEKIKAV 89 (132)
T ss_dssp EEEEEGGGHHHHHHHC-CSCEEEEC-------------------------------------------TTSCHHHHHHHH
T ss_pred EEEeehhhhHHHHhcC-CCcEEEEE-------------------------------------------CCCCHHHHHHHH
Confidence 9999999999999987 43332221 124567899988
Q ss_pred ccCC--CeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhc
Q psy3139 196 AKYT--DKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIW 240 (708)
Q Consensus 196 ~~~~--~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~ 240 (708)
++.. ++||+|+..+++..++.|++.+. .++++. .++|+.++
T Consensus 90 l~~~~~~~ig~e~~~~~~~~~~~L~~~~~---~~~~~~-~~~v~~lR 132 (132)
T 3o5v_A 90 LPNTAAKTIYAEFDHLNVNKFHGLQTIFS---GQFNNL-TPYVQGMR 132 (132)
T ss_dssp CSCCCCSEEEECTTTCCHHHHHHHHTTCC---SEEEEC-HHHHHTC-
T ss_pred HhhccCCeEEEecCCCCHHHHHHHHHhCC---Cceecc-HHHHHHhC
Confidence 8764 58999999999999999987663 578877 57887753
No 40
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=99.52 E-value=4.2e-14 Score=130.37 Aligned_cols=126 Identities=13% Similarity=0.223 Sum_probs=101.7
Q ss_pred hHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhcCCcEEEe
Q psy3139 263 WENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYLGDIVIKP 342 (708)
Q Consensus 263 ~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l~~v~v~~ 342 (708)
+.+|++++|+.|+++|+|+++|++++|++||||++|++ ++++|+.+++.||+|..... .++..+.++++..
T Consensus 4 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~YltGf~~~~--------~~llv~~~~~~l~~d~r~~~-~a~~~~~~~~v~~ 74 (131)
T 3il0_A 4 MQRRLERFDAKLVQSGLDALLVTGQNNIYYLTDFWGTN--------ATVFITKNRRLFLTDSRYTL-IAKQSVHGFDIIE 74 (131)
T ss_dssp GGGHHHHHHHHHHHHTCSEEEECSHHHHHHHHSCCCSS--------EEEEEESSCEEEEECTTSHH-HHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccccEEEeCcccCC--------eEEEEECCCCEEEECchhHH-HHHHhCCCcEEEE
Confidence 57899999999999999999999999999999999874 57899999999999976554 4555555678888
Q ss_pred CccHhhhhhhhhhC--CCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCCch
Q psy3139 343 YDLVWTDLPEFVRT--GKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSP 420 (708)
Q Consensus 343 Y~~~~~~L~~l~~~--~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~p 420 (708)
|++..+.|.++... .++|++|++.++..+..|++ .+++.++++..++
T Consensus 75 ~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~L~~-------------------------------~~~~~~~v~~~~~ 123 (131)
T 3il0_A 75 SKDPLKDIVKFVEVDKLETIGFDNQVSFAYYQALQA-------------------------------IFEGYTLSPQTNF 123 (131)
T ss_dssp CSCHHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHH-------------------------------HTTTSEEEEESSH
T ss_pred eCCHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHh-------------------------------hcCCCEEEECchH
Confidence 87777666655322 26899998888888888764 2566788899999
Q ss_pred hHHHHhcC
Q psy3139 421 VKDLKAYK 428 (708)
Q Consensus 421 I~~lRaiK 428 (708)
+..+|+||
T Consensus 124 v~~lR~iK 131 (131)
T 3il0_A 124 MEELRMIK 131 (131)
T ss_dssp HHHHHC--
T ss_pred HHHhccCC
Confidence 99999998
No 41
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=99.51 E-value=2.1e-14 Score=133.39 Aligned_cols=129 Identities=12% Similarity=0.178 Sum_probs=101.4
Q ss_pred hHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCCcHHHHhhcCCcEEE
Q psy3139 263 WENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKITPVLRNYLGDIVIK 341 (708)
Q Consensus 263 ~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl~~~v~~~l~~v~v~ 341 (708)
..+|++++|+.|+++|+|+++|++++|++||||++|++.+ .+++++|+.+ +++||+|..+... ++ ...++++.
T Consensus 3 ~~~Rl~~lr~~m~~~~~da~li~~~~ni~yltGf~g~~~e----r~~~lli~~~g~~~l~~d~~~~~~-a~-~~~~~~v~ 76 (138)
T 3pn9_A 3 AMSKLQQILTYLESEKLDVAVVSDPVTINYLTGFYSDPHE----RQMFLFVLADQEPLLFVPALEVER-AS-STVSFPVV 76 (138)
T ss_dssp SCCHHHHHHHHHHHHTCSEEEECCHHHHHHHHSCCCCCTT----SCCEEEEESSSCCEEEEEGGGHHH-HH-HHCSSCEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCcCceeeecCCCCCCcc----ceEEEEEeCCCCEEEEEeccchhh-hh-ccCCCcEE
Confidence 4579999999999999999999999999999999998865 2357888877 8999999876654 44 33456666
Q ss_pred eCcc---Hhhhhhhhhh--CCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeee
Q psy3139 342 PYDL---VWTDLPEFVR--TGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLL 415 (708)
Q Consensus 342 ~Y~~---~~~~L~~l~~--~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v 415 (708)
+|.+ ..+.+.++.. ..++|++|++ .++..++.+++ .+++.+++
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~~~~vg~e~~~~~~~~~~~l~~-------------------------------~~~~~~~v 125 (138)
T 3pn9_A 77 GYVDSENPWQKIKHALPQLDFKRVAVEFDNLILTKYHGLKT-------------------------------VFETAEFD 125 (138)
T ss_dssp EECTTSCHHHHHHHHSCCCCCCEEEECTTTCCHHHHHHHHH-------------------------------HSTTCEEE
T ss_pred EEcCCCCHHHHHHHHHHhccCCeEEEecCcCCHHHHHHHHH-------------------------------HCCCCeee
Confidence 7753 4444544432 2468999986 89999988764 26777899
Q ss_pred eCCchhHHHHhcC
Q psy3139 416 TGPSPVKDLKAYK 428 (708)
Q Consensus 416 ~~~~pI~~lRaiK 428 (708)
+..+++..||+||
T Consensus 126 ~~~~~i~~lR~iK 138 (138)
T 3pn9_A 126 NLTPRIQRMRLIK 138 (138)
T ss_dssp ECHHHHHHHTTCC
T ss_pred ehHHHHHHHhhcC
Confidence 9999999999998
No 42
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=99.47 E-value=6.9e-14 Score=150.43 Aligned_cols=127 Identities=18% Similarity=0.327 Sum_probs=102.7
Q ss_pred cCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCccEE
Q psy3139 38 SDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTTAVL 117 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~a~l 117 (708)
+.+.+||++||+.|+++++|+++|++.+ +++|||||+|++|.++||+++++|
T Consensus 1 ~~~~~Rl~~lr~~m~~~giDa~lI~~~~----------------------------ni~YLtGf~g~~~~llvt~~~~~l 52 (356)
T 3q6d_A 1 SNAMEKIERLRSAFDEAGIDGILLTNEH----------------------------SRRYMANFTGTAGVVLISKKRAQF 52 (356)
T ss_dssp -CHHHHHHHHHTTHHHHTCSEEEECCHH----------------------------HHHHHHCCCSSSCEEEEESSCEEE
T ss_pred CcHHHHHHHHHHHHHHcCCCEEEECChh----------------------------hceEccCCCCCCeEEEEECCCeEE
Confidence 3578999999999999999999997642 599999999999999999999999
Q ss_pred EeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhcc
Q psy3139 118 WTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAK 197 (708)
Q Consensus 118 ~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 197 (708)
|||+||.+||++++++ +++... . .+..++|.+.++
T Consensus 53 ~~d~r~~~~a~~~~~~--~~v~~~---------------------------------------~----~~~~~~l~~~l~ 87 (356)
T 3q6d_A 53 ITDFRYVEQASKQAVG--YEIVQH---------------------------------------A----GLIIDEVAKQVK 87 (356)
T ss_dssp EECGGGHHHHHHHSTT--SEEEEC---------------------------------------S----SCHHHHHHHHHH
T ss_pred EEChhhHHHHHhhCCC--CEEEEe---------------------------------------C----CCHHHHHHHHHH
Confidence 9999999999999874 555442 0 234556655554
Q ss_pred --CCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 198 --YTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 198 --~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
..++||+|+..+++..++.|++.+. + +++.. .++++.++.
T Consensus 88 ~~~~~~igve~~~~~~~~~~~l~~~~~--~-~~~~~-~~~~~~~R~ 129 (356)
T 3q6d_A 88 ELGIQKLGFEQDTLTYSSYSAHKEAID--A-EFIPT-SGLVEKLRL 129 (356)
T ss_dssp HHTCSEEEEETTTSBHHHHHHHHHHCC--S-EEEEE-CSHHHHHHT
T ss_pred hcCCceEEEcCccCCHHHHHHHhhhcc--c-ceecc-hhhhhhhcc
Confidence 3579999999999999999998764 3 67766 477887763
No 43
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=99.37 E-value=1.4e-12 Score=145.23 Aligned_cols=180 Identities=9% Similarity=0.046 Sum_probs=130.6
Q ss_pred cCHHHHHHHHHHHHH--hcCCcEEEEeCCCCCc-ccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCc
Q psy3139 38 SDVNQRLSLLRSVMR--SRGVSVYIIVNGDDHQ-VSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTT 114 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~--~~~~~~~ii~~~d~h~-~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~ 114 (708)
....+||++||+.|+ ++++|++||++.|+|. | +|+ .+++++.|||||+|+.|++|||+++
T Consensus 11 ~~~~~Rl~~Lr~~m~~~~~giDa~li~~~~~~~~~---------~y~--------~~~~~~~yLtGf~~~~~~lvVt~d~ 73 (467)
T 3biq_A 11 DVFKKRIELLYSKYNEFEGSPNSLLFVLGSSNAEN---------PYQ--------KTTILHNWLLSYEFPATLIALVPGK 73 (467)
T ss_dssp HHHHHHHHHHHHHGGGSTTCCSEEEEEECSCCTTS---------TTC--------HHHHHHHHHHSSCCSSEEEEEETTE
T ss_pred HHHHHHHHHHHHHHHhhhcCCCEEEEEcCCCCCCC---------CCc--------cchhhhhHhhCCCCCCEEEEEECCe
Confidence 357899999999999 9999999999998873 4 665 3678899999999999999999999
Q ss_pred cEEEeccc---cHHHHhc--ccC--CCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCC
Q psy3139 115 AVLWTEAK---YWERADS--ELS--GTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPN 187 (708)
Q Consensus 115 a~l~td~r---Y~~qa~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (708)
++||||+| |++||++ |+. +..++++... + .+ .. ..++
T Consensus 74 ~~L~~d~~~~~y~~~a~~~~e~~~~~~~v~v~~~~-~-----~~-----------------------------~~-~~~~ 117 (467)
T 3biq_A 74 VIIITSSAKAKHLQKAIDLFKDPESKITLELWQRN-N-----KE-----------------------------PE-LNKK 117 (467)
T ss_dssp EEEEEEHHHHHHHHHHHGGGCC--CCCEEEEEEEC-T-----TC-----------------------------HH-HHHH
T ss_pred EEEEECCcchHHHHHHhhhcccccCCCCeEEEEec-c-----cc-----------------------------cc-cchh
Confidence 99999999 8899998 665 3346665420 0 00 00 0013
Q ss_pred HHHHHHHhccC-CCeEEEC-CCcccHHHHHHHHHHHHh----CCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCc
Q psy3139 188 MNQWIATHAKY-TDKIASD-PLKWEFSEWLNLDNYLRA----HGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGE 261 (708)
Q Consensus 188 ~~~~l~~~~~~-~~~~~~d-~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~ 261 (708)
..+||++.++. +++||+| +..++...++.|.+.|.. .+++++.. .++|+.+|. .+++.-+--+..++.
T Consensus 118 ~~~~L~~~L~~~~~~Igv~~~~~~s~~~~~~L~~~l~~~~~~~~~~lv~~-~~~i~~lr~-----iK~~~Ei~~~r~A~~ 191 (467)
T 3biq_A 118 LFDDVIALINSAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDI-SLGLSKVWE-----VKDVNEQAFLSVSSK 191 (467)
T ss_dssp HHHHHHHHHHHHCSEEEECTTCCCCSHHHHHHHHHHHHHHHHHTCEEEEC-HHHHHHHTC-----SCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhCCEEEEecCcccchhHHHHHHHHHHhhcccCCceeech-HHHHHHHHc-----cCCHHHHHHHHHHHH
Confidence 45677766653 6799995 678899999999988854 46788887 689999985 234444444555555
Q ss_pred chHhHHHHHHHHhhh
Q psy3139 262 PWENKVQSMKDFMSS 276 (708)
Q Consensus 262 ~~~~Ki~rvr~~M~e 276 (708)
-...-+.++.+.++.
T Consensus 192 i~~~a~~~~~~~i~~ 206 (467)
T 3biq_A 192 GSDKFMDLLSNEMVR 206 (467)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 555555566666653
No 44
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=99.37 E-value=5.5e-13 Score=145.45 Aligned_cols=161 Identities=13% Similarity=0.039 Sum_probs=123.9
Q ss_pred cCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCc----eEEEEeCC
Q psy3139 38 SDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGES----GQGVVTQT 113 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~----g~~~vt~~ 113 (708)
..+.+|+++||+.|+++++|++||++. + ++.|+|||+|+. +.+||+++
T Consensus 22 ~e~~~Rl~~Lr~~m~~~~lDa~li~~~--~--------------------------ni~yltgf~~s~~~~p~~llV~~~ 73 (402)
T 1kp0_A 22 AEMTRRZBRLRAWMAKSBIDAVLFTSY--H--------------------------NINYYSGWLYCYFGRKYAZVIBZV 73 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECSH--H--------------------------HHHHHHSCCCCCTTCCCEEEECSS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEcCC--C--------------------------CceEecCCCCCCCCceEEEEEeCC
Confidence 357899999999999999999999753 2 599999999864 79999999
Q ss_pred ccEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHH
Q psy3139 114 TAVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIA 193 (708)
Q Consensus 114 ~a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (708)
+++||||+||..||.+++.+..+.+... + .++..+||+
T Consensus 74 ~~~l~~~~~~~~~a~~~~~~~~v~~~~~---------------------------------------~---~~~~~~~l~ 111 (402)
T 1kp0_A 74 KAVTISKGIDGGMPWRRSFGBNIVYTDW---------------------------------------K---RDNFYSAVK 111 (402)
T ss_dssp CEEEEEEGGGTTHHHHHCSSEEEEECSS---------------------------------------S---TTHHHHHHH
T ss_pred CCEEEeccchhhhhHHhccCcceEeccc---------------------------------------c---ccCHHHHHH
Confidence 9999999999999988876432322111 1 135678998
Q ss_pred HhccCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHH
Q psy3139 194 THAKYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDF 273 (708)
Q Consensus 194 ~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~ 273 (708)
+.++..++||+|+..+++..++.|++.+. +.+++.. .++|+.++ ..++|.-+--++.+++-...-++++.+.
T Consensus 112 ~~l~~~~~igvd~~~~~~~~~~~l~~~l~--~~~~v~~-~~~i~~lR-----~iKs~~Ei~~~r~A~~i~~~a~~~~~~~ 183 (402)
T 1kp0_A 112 KLVKGAKZIGIEHDHVTLBHRRZLZKALP--GTEFVDV-GZPVMWZR-----VIKSSEEZBLIRZGARISDIGGAATAAA 183 (402)
T ss_dssp HHHTTCSEEEECTTTCBHHHHHHHHHHST--TCEEEEC-HHHHHHHH-----TSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCEEEEecCCCCHHHHHHHHHhCC--CCEEEEC-HHHHHHHH-----HcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877789999999999999999988764 5688887 58999985 3455665656666666666666666666
Q ss_pred hhh
Q psy3139 274 MSS 276 (708)
Q Consensus 274 M~e 276 (708)
++.
T Consensus 184 i~~ 186 (402)
T 1kp0_A 184 ISA 186 (402)
T ss_dssp CCT
T ss_pred hcC
Confidence 653
No 45
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=99.30 E-value=4.9e-12 Score=135.79 Aligned_cols=129 Identities=17% Similarity=0.297 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCCccEEEecc
Q psy3139 42 QRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQTTAVLWTEA 121 (708)
Q Consensus 42 ~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~~a~l~td~ 121 (708)
+|+++||+.|+++++|++||++.+.- .+.+++|||||+|++|.+||++++++||||+
T Consensus 2 ~Rl~~Lr~~m~~~~lDa~li~~~~ni-----------------------~~~~~~YLtGf~~~~~~llI~~~~~~L~~d~ 58 (359)
T 2zsg_A 2 DRSERLIQLISEEGIDAFLIMNIENS-----------------------ARASSVYFSGFTGSFSIILISENTRLLITDS 58 (359)
T ss_dssp CCHHHHHHHHHTTTCCEEEEEESTTT-----------------------THHHHHHHHCCCSSCEEEEEETTEEEEEECT
T ss_pred hHHHHHHHHHHHCCCcEEEEEChhHc-----------------------ccccCeeEeccCCCCEEEEEECCCCEEEECc
Confidence 58999999999999999999876411 1335699999999999999999999999999
Q ss_pred ccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhcc--CC
Q psy3139 122 KYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAK--YT 199 (708)
Q Consensus 122 rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 199 (708)
||..||.++ . .|+++..+ . + +..++|.+.++ ..
T Consensus 59 r~~~~a~~~-~--~~~v~~~~--------------------------------------~--~--~~~~~l~~~L~~~~~ 93 (359)
T 2zsg_A 59 RYTVQAKQE-T--DFEVREVK--------------------------------------G--G--DFIDVLKKTVNDLKI 93 (359)
T ss_dssp TTHHHHHHH-C--CSEEEEC---------------------------------------------CCHHHHHHHHHHTTC
T ss_pred ccHHHHHhC-C--CCEEEEec--------------------------------------C--c--chHHHHHHHHHhcCC
Confidence 999999988 5 36665320 0 0 12344444333 25
Q ss_pred CeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 200 DKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 200 ~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
++||+|+..+++..++.|++.+. +.+++.. .++|+.++.
T Consensus 94 ~~vgvd~~~~~~~~~~~l~~~l~--~~~~v~~-~~~i~~lr~ 132 (359)
T 2zsg_A 94 KTIALEEERVSLSLFRRISSAFG--DRKFIGI-DDEVKQMRM 132 (359)
T ss_dssp CEEEECGGGSBHHHHHHHHHHTT--TCEEEEC-HHHHHHHHH
T ss_pred CEEEEeCCcCCHHHHHHHHhhCC--CcEEEEC-hhhhhhhhc
Confidence 79999999999999999987663 3678777 588888863
No 46
>3qoc_A Putative metallopeptidase; MCSG, PSI-2, structural genomics, midwest center for structu genomics, hydrolase; HET: MSE; 2.15A {Corynebacterium diphtheriae}
Probab=99.25 E-value=1.4e-11 Score=115.11 Aligned_cols=129 Identities=15% Similarity=0.191 Sum_probs=97.9
Q ss_pred ccCCcchHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEe-CCceEEEecCCCCcHHHHhhc
Q psy3139 257 EYAGEPWENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVIS-TSLCVLYLPKNKITPVLRNYL 335 (708)
Q Consensus 257 ~~~G~~~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~-~d~~~Lfvd~~kl~~~v~~~l 335 (708)
.|+-.++.+|++++|+.|+++++|+++|+++.|++||||+.|++ ++++|+ .++++||+|.+... .++..+
T Consensus 4 ~~~~~~~~~Rl~~l~~~m~~~~~da~li~~~~n~~yltGf~~s~--------g~lvv~~~~~a~l~td~Ry~~-qA~~~~ 74 (135)
T 3qoc_A 4 PLADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTGSN--------AALIINKDLSARISTDGRYIT-QIAEQV 74 (135)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHTCSEEEECCHHHHHHHHCCCSSC--------CEEEEETTSCEEEEECGGGHH-HHHHHC
T ss_pred CcChHHHHHHHHHHHHHHHHCCCCEEEEcChhhCeeeecccCCC--------eEEEEeeCCccEEEeCcHHHH-HHHHhC
Confidence 47778999999999999999999999999999999999998864 478888 88999999975543 445555
Q ss_pred CCcEEEeCccHhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCC-Ce
Q psy3139 336 GDIVIKPYDLVWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPP-LK 413 (708)
Q Consensus 336 ~~v~v~~Y~~~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~-~~ 413 (708)
.++++..+.+..+.|.+.....++|++|++ .++..++.+++ .+++ .+
T Consensus 75 ~~~~i~~~~~~~~~l~~~~~~~~~vG~e~~~ls~~~~~~L~~-------------------------------~l~~~~~ 123 (135)
T 3qoc_A 75 PDIESLMARNCAPALLSDINGPKRVGFEADYLSVSQCEELRK-------------------------------SAGSDVE 123 (135)
T ss_dssp TTSEEEECSSHHHHHHHTCCSSEEEEEETTTSBHHHHHHHHH-------------------------------HSCTTEE
T ss_pred CCcEEEEeCcHHHHHHhcCcCCCeEEECCCcccHHHHHHHHH-------------------------------hccCCcE
Confidence 567777777666666543224578999987 88888888764 1554 56
Q ss_pred eeeCCchhHHHH
Q psy3139 414 LLTGPSPVKDLK 425 (708)
Q Consensus 414 ~v~~~~pI~~lR 425 (708)
+++..++|..+|
T Consensus 124 lv~~~~~v~~lR 135 (135)
T 3qoc_A 124 LIPVTGAIEKLR 135 (135)
T ss_dssp EEEECSCC----
T ss_pred EEECccHHHHhC
Confidence 777778888776
No 47
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=99.24 E-value=3.6e-11 Score=111.58 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=94.9
Q ss_pred hHhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCCCCcHHHHhhcCCcEEEe
Q psy3139 263 WENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKNKITPVLRNYLGDIVIKP 342 (708)
Q Consensus 263 ~~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~kl~~~v~~~l~~v~v~~ 342 (708)
+.+|++++|+.|+++++|+++|+++.|++||||++|++ ++++++.++++||+|.... ..++..+.+.++..
T Consensus 8 ~~~Rl~~l~~~m~~~~~da~li~~~~n~~YltGf~~~~--------~~~vv~~~~~~l~td~ry~-~qa~~~~~~~~v~~ 78 (132)
T 3ovk_A 8 LEQRLGHCLRQMAEKGLEALLVTHLTNSYYLTGFSGTA--------ATVLITAKRRVLITDSRYT-LLAKASVEGFDIIE 78 (132)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECSHHHHHHHHCCCCSC--------CEEEEESSCEEEEECTTTH-HHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEcCcccceeeeCccCCC--------EEEEEECCccEEEECchhH-HHHHHhCCCcEEEE
Confidence 56899999999999999999999999999999999864 4678888999999997554 34455555567777
Q ss_pred CccHhhhhhhhhh--CCCEEEecCCchHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeCCch
Q psy3139 343 YDLVWTDLPEFVR--TGKCLYLPDEANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTGPSP 420 (708)
Q Consensus 343 Y~~~~~~L~~l~~--~~~~I~id~~~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~~~p 420 (708)
|.+-.+.+.++.. ..++|++|++.++..+..+++ .+++.++++..++
T Consensus 79 ~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~L~~-------------------------------~l~~~~~v~~~~~ 127 (132)
T 3ovk_A 79 SRTPLKVVAELLEADQIDCLGFEDQVSFSFYQAMQA-------------------------------ELSGITLLAQSGF 127 (132)
T ss_dssp CSCHHHHHHHHHHHHTCCEEEEETTSBHHHHHHHHH-------------------------------HCTTCEEEEESST
T ss_pred eCCCHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHh-------------------------------hCCCCeEEECchH
Confidence 7653344443322 357899999888888888764 2666678888888
Q ss_pred hHHHH
Q psy3139 421 VKDLK 425 (708)
Q Consensus 421 I~~lR 425 (708)
|..+|
T Consensus 128 v~~lR 132 (132)
T 3ovk_A 128 VEHLR 132 (132)
T ss_dssp TGGGC
T ss_pred HHHhC
Confidence 88776
No 48
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=99.11 E-value=2e-10 Score=106.35 Aligned_cols=124 Identities=10% Similarity=0.218 Sum_probs=90.7
Q ss_pred HhHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCCcHHHHhhcCCcEEEe
Q psy3139 264 ENKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKITPVLRNYLGDIVIKP 342 (708)
Q Consensus 264 ~~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl~~~v~~~l~~v~v~~ 342 (708)
.+|++++|+.|+++|+|+++|+++.|++||||++|+..+. | .+++|+.+ +++||+|..... .++... +.++..
T Consensus 2 ~~Rl~~l~~~m~~~glDa~li~~~~ni~YltGf~~~~~er-~---~~l~v~~~g~~~l~~~~~y~~-~a~~~~-~~~i~~ 75 (132)
T 3o5v_A 2 NAKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHER-Q---LFLFVYHDLAPVLFVPALEVA-RASQAI-SFPVFG 75 (132)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECCHHHHHHHHSCCCCCTTS-C---CEEEEESSSCCEEEEEGGGHH-HHHHHC-CSCEEE
T ss_pred hHHHHHHHHHHHHCCCCEEEEcCcchhhHhhCCCCCCccc-e---EEEEEeCCCCEEEEeehhhhH-HHHhcC-CCcEEE
Confidence 4699999999999999999999999999999999876543 2 46788876 789999975443 333333 445556
Q ss_pred Cc---cHhhhhhhhhhC--CCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeee
Q psy3139 343 YD---LVWTDLPEFVRT--GKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLT 416 (708)
Q Consensus 343 Y~---~~~~~L~~l~~~--~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~ 416 (708)
|. +..+.|.+.... .++|++|.+ .++..++.|++ .++ .++++
T Consensus 76 ~~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~-------------------------------~~~-~~~~~ 123 (132)
T 3o5v_A 76 YVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQT-------------------------------IFS-GQFNN 123 (132)
T ss_dssp ECTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHT-------------------------------TCC-SEEEE
T ss_pred EECCCCHHHHHHHHHhhccCCeEEEecCCCCHHHHHHHHH-------------------------------hCC-Cceec
Confidence 63 334455544322 358999976 88888888764 266 78888
Q ss_pred CCchhHHHH
Q psy3139 417 GPSPVKDLK 425 (708)
Q Consensus 417 ~~~pI~~lR 425 (708)
..+.|..+|
T Consensus 124 ~~~~v~~lR 132 (132)
T 3o5v_A 124 LTPYVQGMR 132 (132)
T ss_dssp CHHHHHTC-
T ss_pred cHHHHHHhC
Confidence 888887776
No 49
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=99.09 E-value=3.3e-10 Score=105.70 Aligned_cols=125 Identities=8% Similarity=0.147 Sum_probs=90.4
Q ss_pred HHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCCcHHHHhhcCCcEEEeCc
Q psy3139 266 KVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKITPVLRNYLGDIVIKPYD 344 (708)
Q Consensus 266 Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl~~~v~~~l~~v~v~~Y~ 344 (708)
|++++|+.|+++|+|+++|+++.|++||||+.|+..+ .| .+++|+.+ +++||+|..... .+++...+.++..|.
T Consensus 5 Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~~e-r~---~~llv~~~g~~~l~~~~~~~~-~a~~~~~~~~i~~~~ 79 (140)
T 3i7m_A 5 KLEQIQQWTAQHHASMTYLSNPKTIEYLTGFGSDPIE-RV---LALVVFPDQDPFIFAPALEVE-VIKETGWQFPVIGYL 79 (140)
T ss_dssp HHHHHHHHHHHTTCSEEEECCHHHHHHHHCCCCCCCS-SC---CEEEECSSSCCEEEEEGGGHH-HHHTTTCCSCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCCCcceeecCCCCCCcc-ce---EEEEEeCCCCEEEEEecccHH-HHHhccCcCcEEEEc
Confidence 9999999999999999999999999999999987643 23 35778766 789999975432 344433344555553
Q ss_pred ---cHhhhhhhhhh----CCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeee-
Q psy3139 345 ---LVWTDLPEFVR----TGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLL- 415 (708)
Q Consensus 345 ---~~~~~L~~l~~----~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v- 415 (708)
+..+.+.++.. ..++|++|.+ .++..++.|++ .+++.+++
T Consensus 80 d~~~~~~~l~~~l~~~~~~~~~ig~e~~~~~~~~~~~L~~-------------------------------~l~~~~~v~ 128 (140)
T 3i7m_A 80 DHENPWAMIADQVKQRHVNPEHVAIEKGQLQVARMEALAA-------------------------------QFSAPSFDL 128 (140)
T ss_dssp TTSCHHHHHHHHHHHTTCCCSEEEECTTTSCHHHHHHHHT-------------------------------TSSSCEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEEccCCCCHHHHHHHHH-------------------------------HCCCCEEec
Confidence 33344433321 2478999965 88988888764 26777899
Q ss_pred eCCchhHHHHh
Q psy3139 416 TGPSPVKDLKA 426 (708)
Q Consensus 416 ~~~~pI~~lRa 426 (708)
+.++.|..+|+
T Consensus 129 ~~~~~i~~lR~ 139 (140)
T 3i7m_A 129 DITSFIEHMRG 139 (140)
T ss_dssp ECHHHHHHC--
T ss_pred CHHHHHHHHHc
Confidence 99899999986
No 50
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=99.05 E-value=4.6e-10 Score=103.68 Aligned_cols=123 Identities=7% Similarity=0.166 Sum_probs=90.6
Q ss_pred hHHHHHHHHhhhCCCCEEEEeccccchhhccccCCCCCCCcceEEEEEEeCC-ceEEEecCCCCcHHHHhhcCCcEEEeC
Q psy3139 265 NKVQSMKDFMSSKSVDVMVITALDQIAWLLNLRGKDNPFSPLFKAYFVISTS-LCVLYLPKNKITPVLRNYLGDIVIKPY 343 (708)
Q Consensus 265 ~Ki~rvr~~M~e~g~DallIs~ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d-~~~Lfvd~~kl~~~v~~~l~~v~v~~Y 343 (708)
+|++++|+.|+++|+|+++|+++.|++||||++|+..+ .| .+++|+.+ +++||+|..... .++... +.++..|
T Consensus 3 ~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf~~~~~e-r~---~~l~v~~~g~~~l~~~~~y~~-~a~~~~-~~~v~~~ 76 (132)
T 3ooo_A 3 SKLNRIRHHLHSVQAELAVFSDPVTVNYLTGFFCDPHE-RQ---MFLFVYEDRDPILFVPALEVS-RAKQSV-PFPVFGY 76 (132)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHHHHHSCCCCCTT-SC---CEEEEESSSCCEEEEEGGGHH-HHHHHC-SSCEEEE
T ss_pred hHHHHHHHHHHHCCCCEEEEcCcchHHHHhCCCCCCCc-ce---EEEEEeCCCCEEEEEeccchH-HHHhcC-CCcEEEE
Confidence 69999999999999999999999999999999987643 22 35777766 689999975443 333333 4455556
Q ss_pred c---cHhhhhhhhhhC--CCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccccccccccccCCCCCeeeeC
Q psy3139 344 D---LVWTDLPEFVRT--GKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWRTAVDRWSIDEVPPLKLLTG 417 (708)
Q Consensus 344 ~---~~~~~L~~l~~~--~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~v~~ 417 (708)
. +..+.|.+.... .++|++|.+ .++..++.|++ .++ .++++.
T Consensus 77 ~d~~~~~~~l~~~l~~~~~~~ig~e~~~~~~~~~~~L~~-------------------------------~~~-~~~~~~ 124 (132)
T 3ooo_A 77 IDSENPWQKIASNLPSFSVSKVLAEFDNLNVTKFQGLQT-------------------------------VFD-GHFENL 124 (132)
T ss_dssp CTTSCHHHHHHHHCSCCCCSEEEECTTTCCHHHHHHHHH-------------------------------HCC-SEEEEC
T ss_pred eCCCCHHHHHHHHHhhccCCeEEEecCCcCHHHHHHHHH-------------------------------hCC-cceech
Confidence 3 444555554322 358999965 88888888764 266 788888
Q ss_pred CchhHHHH
Q psy3139 418 PSPVKDLK 425 (708)
Q Consensus 418 ~~pI~~lR 425 (708)
++.|..+|
T Consensus 125 ~~~v~~lR 132 (132)
T 3ooo_A 125 TPYIQNMR 132 (132)
T ss_dssp CHHHHTTC
T ss_pred HHHHHhcC
Confidence 88888776
No 51
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=98.97 E-value=2.8e-09 Score=116.02 Aligned_cols=130 Identities=14% Similarity=0.096 Sum_probs=101.1
Q ss_pred cCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCc----eEEEEeCC
Q psy3139 38 SDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGES----GQGVVTQT 113 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~----g~~~vt~~ 113 (708)
....+|+++||+.|+++++|+++|.+.+ +++|+|||+|++ +.++|+++
T Consensus 13 ~e~~~R~~~l~~~m~~~g~da~li~~~~----------------------------ni~YltG~~~~~~~r~~~l~v~~~ 64 (378)
T 4ege_A 13 AVYARRLAAAAAATEQAGLAGLVITPGY----------------------------DLRYLIGSRADTFERLTALVLPAS 64 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSSH----------------------------HHHHHHCCCCCCSSSCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCcc----------------------------hhHHhhCCCCCCCcceEEEEEEeC
Confidence 4578999999999999999999997542 599999999986 78899887
Q ss_pred -ccEEEeccccHHHHhcc-cCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHH
Q psy3139 114 -TAVLWTEAKYWERADSE-LSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQW 191 (708)
Q Consensus 114 -~a~l~td~rY~~qa~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (708)
+++|+|+.+|..|++.+ +.+..+.+... . +..+..+.
T Consensus 65 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~--~~~~~~~~ 103 (378)
T 4ege_A 65 GVPTIVLPRLELASLKESAASDLGVCVRDW---------------------------------------V--DGDDPYQL 103 (378)
T ss_dssp SCCEEEEEGGGGGGGGTSSTTTTTCEEEEE---------------------------------------C--TTSCHHHH
T ss_pred CcEEEEEChhhHHHHHhcccCCCCeEEEEe---------------------------------------c--CCCCHHHH
Confidence 68999999999999987 43334555432 0 11345667
Q ss_pred HHHhccCC-CeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 192 IATHAKYT-DKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 192 l~~~~~~~-~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
+++.++.. ++||+| ..+++..++.|.+.+ +.+++.. .++++.++.
T Consensus 104 l~~~l~~~~~~igve-~~~~~~~~~~l~~~~---~~~~~~~-~~~i~~~R~ 149 (378)
T 4ege_A 104 VAVALGGAPAATAVT-DSMPALHLLPLADAL---GVLPVLA-TDVLRQLRM 149 (378)
T ss_dssp HHHHTTSSSCCEEEC-TTCCHHHHHHHHHHH---TSCCEES-HHHHHHHHT
T ss_pred HHHHHhcCCCEEEEc-CCCcHHHHHHHHHHc---CCeEEEc-HHHHHHHHH
Confidence 77776654 699999 578999999999887 5677776 578887763
No 52
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=98.86 E-value=1.3e-08 Score=112.42 Aligned_cols=143 Identities=11% Similarity=0.141 Sum_probs=101.0
Q ss_pred CHHHHHHHHHHHHHh--------cCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCcccc---ccccccccCCceE
Q psy3139 39 DVNQRLSLLRSVMRS--------RGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKR---LEYISGFTGESGQ 107 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~--------~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~---~~~~sgftgs~g~ 107 (708)
...+|+++||+.|++ +++|++||++.|++.+ +.| .++ ..|||||+|+++.
T Consensus 12 ~~~~Rl~~L~~~m~~~~~~~~~~~g~Dalli~~~~~d~~--------~~y-----------~q~~~~~~yLtG~~~~~~~ 72 (444)
T 3cb6_A 12 TFHKRLGILLTSWKNEEDGKTLFQDCDSILVTVGAHDDT--------NPY-----------QKSTALHTWLLGYEFPSTL 72 (444)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHTSTTCSEEEEEECSCCTT--------CCC-----------CHHHHHHHHHHSSCCSSEE
T ss_pred HHHHHHHHHHHHhhhcCcccccccCCCEEEEEeCCCCCC--------CCc-----------ccchhhhHHHhCCCCCCEE
Confidence 467899999999998 9999999998865311 122 234 6899999999999
Q ss_pred EEEeCCccEEEeccc---cHHHHh-cccCCCceEEEEe-cccCccccccCCCCCCCCcccccccccccccccceeccccC
Q psy3139 108 GVVTQTTAVLWTEAK---YWERAD-SELSGTEWTLCRT-DFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGH 182 (708)
Q Consensus 108 ~~vt~~~a~l~td~r---Y~~qa~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (708)
+||++++++||||.| |++|++ .++.+..+++... . + .
T Consensus 73 lvi~~~~~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~--------d-----------------------------~- 114 (444)
T 3cb6_A 73 ILLEKHRITILTSVNKANMLTKLAETKGAAADVNILKRTK--------D-----------------------------A- 114 (444)
T ss_dssp EEEETTEEEEEEEHHHHTTTHHHHTCTTCSSEEEEEEECS--------C-----------------------------H-
T ss_pred EEEeCCcEEEEEcCchHHHHhhhhccccCCccEEEEeccc--------c-----------------------------c-
Confidence 999999999999997 899998 7666433444321 0 0 0
Q ss_pred CCCC-CHHHHHHHhcc-CCCeEEECC-CcccHHHHHHHHHHHHh--CCCEEEecchhhhhhhc
Q psy3139 183 VKSP-NMNQWIATHAK-YTDKIASDP-LKWEFSEWLNLDNYLRA--HGLQLNLLTENLVDSIW 240 (708)
Q Consensus 183 ~~~~-~~~~~l~~~~~-~~~~~~~d~-~~~~~~~~~~l~~~~~~--~~~~~~~~~~~lv~~~~ 240 (708)
..+ ...+++.+.++ .+++||+|+ ..++...+..+.+.+.+ .+.+++.+ .++++.++
T Consensus 115 -~~~~~~~~~~~~~l~~~~~~ig~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~i~~~r 175 (444)
T 3cb6_A 115 -EENKKLFEKIIEYIRATNKKVGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDA-SLGLAKCL 175 (444)
T ss_dssp -HHHHHHHHHHHHHHHTTTSEEEECTTCCCCSHHHHHHHHHHTTTGGGSEEEEC-HHHHHHHH
T ss_pred -ccCHHHHHHHHHHHHhcCCEEEEeccccchhHHHHHHHHHHhhccCCceEeec-HHHHHHHH
Confidence 000 12344444443 257999987 66787888888777743 34678777 57888876
No 53
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.1e-07 Score=107.86 Aligned_cols=175 Identities=11% Similarity=0.064 Sum_probs=108.8
Q ss_pred hHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCCCccCHHHHHHH----HHHH-Hh---hcCCCCCCC
Q psy3139 421 VKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEK-----GIESGELWDELKVLEC----VDQL-RG---EHWSYIGNS 487 (708)
Q Consensus 421 I~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~-----~i~~G~~~TE~eva~~----l~~~-r~---~~~~~~~~S 487 (708)
+..=|-+-|+.-+..+|.|+.+...++..+..++.+ .+++|.++.| +..+ +++. .+ ......|.+
T Consensus 34 ~lkekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~E--LCe~GD~~I~e~~akvyk~K~~~KGIA 111 (614)
T 4b6a_t 34 LLKDKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPE--LCLLTDSFILTRLEQYYKNKVNERGIA 111 (614)
T ss_dssp --CCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTH--HHHHHHHHHHHHHHTSSTTCSCCEEEE
T ss_pred hhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHH--HHHHHHHHHHHHHHhhhcCCcccCCCc
Confidence 344466788999999999998887777666555432 2456643444 3333 2221 11 122345789
Q ss_pred CCccccccCCCCCcccCCCCCC-------------------CccccCC-eEEEEeecccCCcccceeeEEecCCCCHH--
Q psy3139 488 FPPTAAHGTHATDAEYRPDAKT-------------------NVKIGDD-ILRVSYGSQYLDGTTKVNAILHCGIPTPL-- 545 (708)
Q Consensus 488 F~tIva~G~NaAi~Hy~p~~~t-------------------~~~l~~g-llLiDsG~qY~~gtTDiTRTv~~G~pt~e-- 545 (708)
|||-++ .|.-+.||.|.... +..|+.| ++-||+|++..||.+|.+.|+.+|...+.
T Consensus 112 FPT~IS--vN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~ 189 (614)
T 4b6a_t 112 IPTTID--IDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKP 189 (614)
T ss_dssp EEEEEE--ETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTST
T ss_pred cCceec--HHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCcccccc
Confidence 998765 48888999996432 3479999 99999999998889999999999853221
Q ss_pred ---------HHHHHHHHHHHHHHH---HHhc---------------CCCCCchHHHHHHHHHHHHHcCCC-CCCCCceec
Q psy3139 546 ---------QRSVYTAILKGLIAL---VTTQ---------------FLPGSSLHRLEYLLEQPLLALALD-YRPQRVHSI 597 (708)
Q Consensus 546 ---------qr~~yt~VLka~ial---~~a~---------------fp~G~~g~~lD~~AR~~L~~~G~~-y~HGtGHGV 597 (708)
-++ -++++.++.|. .+.+ ..+|++..++-.+.......++.. ...-+||+|
T Consensus 190 ~~~~~~pvtGrk-ADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~gvt~~~It~~IekvaksY~ck~Vegl~sH~i 268 (614)
T 4b6a_t 190 ILQPTGPLLGGK-ADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGITGQLIRTIVDTIARSYNCGVVPGSRVRRI 268 (614)
T ss_dssp TTTTTSCBCHHH-HHHHHHHHHHHHHHHHHC----------------STTCBHHHHHHHHHHHHHTTTCEECTTCEEEEE
T ss_pred cccccccccchh-hhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCCCcchHHHHHHHHHHHhcCCcEEecccccccc
Confidence 011 12233333222 2111 145777776665555555555542 234479999
Q ss_pred CCC
Q psy3139 598 GEF 600 (708)
Q Consensus 598 G~~ 600 (708)
+.|
T Consensus 269 ~r~ 271 (614)
T 4b6a_t 269 RRF 271 (614)
T ss_dssp BTT
T ss_pred cce
Confidence 976
No 54
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=98.71 E-value=4.5e-08 Score=105.86 Aligned_cols=136 Identities=14% Similarity=0.224 Sum_probs=99.5
Q ss_pred ccCCcCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCce-----EE
Q psy3139 34 SHVTSDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESG-----QG 108 (708)
Q Consensus 34 ~~~~~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g-----~~ 108 (708)
.+-.....+|+++||+.|+++|+|+++|.+.+ +++|||||.+... .+
T Consensus 9 ~~~~~Ey~~Rl~rlr~~m~~~glDalli~~~~----------------------------ni~YLTG~~~~~~~~~~~~l 60 (377)
T 4fkc_A 9 HHGSMDYKRRIHKFQAHFGKKGFEGALVAPGS----------------------------NFYYLTGFNPLGTLERLFVL 60 (377)
T ss_dssp CSSSSCHHHHHHHHHHHHHHTTCCEEEECSSH----------------------------HHHHHHSCCCCCCSSSCCEE
T ss_pred CcchHHHHHHHHHHHHHHHHCCCCEEEECCCh----------------------------hheeecCCCCCCCCcceEEE
Confidence 44556799999999999999999999997542 5999999997654 57
Q ss_pred EEeCCccEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCH
Q psy3139 109 VVTQTTAVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNM 188 (708)
Q Consensus 109 ~vt~~~a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (708)
+++.+...++++.|+..++.++..+ +...... .......+
T Consensus 61 vv~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~---------------------------------------~~~~~~~~ 100 (377)
T 4fkc_A 61 ILPSEGLLTAIAPRLYEKELEEFNG-EVVLWSD---------------------------------------SENPYKIF 100 (377)
T ss_dssp EEESSSCCEEEEEGGGHHHHTTCSS-EEEEECT---------------------------------------TSCHHHHH
T ss_pred EEcCCCcEEEEeccchHHHHHhcCC-CEEEecc---------------------------------------ccCHHHHH
Confidence 7788877888888998888877764 2222111 00001123
Q ss_pred HHHHHHhccCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 189 NQWIATHAKYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 189 ~~~l~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
.+.|++.....++|++|. .+++..+..|.+.+. +.+++++ .++++.++.
T Consensus 101 ~~~l~~~~~~~~~i~~d~-~~~~~~~~~l~~~~~--~~~~~d~-~~~i~~lR~ 149 (377)
T 4fkc_A 101 ATKIKETFKEGEKLLIDD-TMPVGVFLKAKDIFD--KYSLHPI-SPVISELRE 149 (377)
T ss_dssp HHHHHHHSCSSCEEEECT-TSCHHHHHHTHHHHT--TSEEEES-HHHHHHHHT
T ss_pred HHHHHHhhhccceeeeec-cccHHHHHHHHhhCC--CCeEEEh-HHHHHHHHh
Confidence 455666666788999996 578999999988875 5678887 578888763
No 55
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=98.64 E-value=5.2e-08 Score=104.78 Aligned_cols=120 Identities=13% Similarity=0.168 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCce-E-EEEeCCccEEE
Q psy3139 41 NQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESG-Q-GVVTQTTAVLW 118 (708)
Q Consensus 41 ~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g-~-~~vt~~~a~l~ 118 (708)
.+|+++||+.|+++++|+++|.+.+ +++|||||+|+++ + ++|+++...|+
T Consensus 5 ~~R~~~l~~~m~~~~~da~li~~~~----------------------------n~~yltg~~~~~~~~~llv~~~~~~l~ 56 (351)
T 1wy2_A 5 NEKVKKIIEFMDKNSIDAVLIAKNP----------------------------NVYYISGASPLAGGYILITGESATLYV 56 (351)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECSHH----------------------------HHHHHHSCCCSSCCEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCC----------------------------CceEecCCCCCCCcEEEEEECCCcEEE
Confidence 6899999999999999999997542 5899999999887 7 88899999999
Q ss_pred eccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHhccC
Q psy3139 119 TEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATHAKY 198 (708)
Q Consensus 119 td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 198 (708)
+|.|| ++| ++.++ +++... . . .+.+.+.++.
T Consensus 57 ~~~~~-~~~-~~~~~--~~v~~~---------------------------------------~-----~-~~~l~~~l~~ 87 (351)
T 1wy2_A 57 PELEY-EMA-KEESN--IPVEKF---------------------------------------K-----K-MDEFYKALEG 87 (351)
T ss_dssp EHHHH-HHH-HHHCS--SCEEEE---------------------------------------S-----S-HHHHHHHHTT
T ss_pred ECchH-HHH-hhcCC--CeEEEe---------------------------------------C-----c-HHHHHHHHcc
Confidence 99999 888 45543 333221 0 1 2334444444
Q ss_pred CCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 199 TDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 199 ~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
.++||+| ..+++..++.|++.+. ..+++.. .++++.++.
T Consensus 88 ~~~ig~e-~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~~r~ 126 (351)
T 1wy2_A 88 IKSLGIE-SSLPYGFIEELKKKAN--IKEFKKV-DDVIRDMRI 126 (351)
T ss_dssp CSEEEEC-TTCBHHHHHHHHHHSC--CCEEEEC-HHHHHHHHT
T ss_pred CCEEEEc-CcCCHHHHHHHHhhCC--CCeEEEc-HHHHHHHHh
Confidence 5799999 8899999999887653 3477776 578887763
No 56
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=98.59 E-value=2e-08 Score=116.19 Aligned_cols=152 Identities=8% Similarity=0.068 Sum_probs=113.9
Q ss_pred hHhHHHHHHHHhhhCC-----CCEEEEec------------cccchhhccccCCCCCCCcceEEEEEEeCCceEEEecCC
Q psy3139 263 WENKVQSMKDFMSSKS-----VDVMVITA------------LDQIAWLLNLRGKDNPFSPLFKAYFVISTSLCVLYLPKN 325 (708)
Q Consensus 263 ~~~Ki~rvr~~M~e~g-----~DallIs~------------ldnIaWLtnlRG~Dv~~~Pvf~aylvv~~d~~~Lfvd~~ 325 (708)
..+|++++|+.|++++ +||+||++ ..+++|||||.|+. ++++|+.+++.||+|.+
T Consensus 6 ~~~Rl~~LR~~m~~~~~~~~~lda~lv~~~D~h~sey~~~~~~~~~ylsGFtGSa--------G~~vVt~~~a~l~tDgR 77 (623)
T 3ctz_A 6 TSELLRQLRQAMRNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA--------GTAIITEEHAAMWTDGR 77 (623)
T ss_dssp CHHHHHHHHHHTTCTTTCSSCCSEEEECSCCTTCCSSCCGGGCHHHHHHSCCSSC--------CEEEEESSCEEEEECGG
T ss_pred HHHHHHHHHHHHHhcCCCCCceeEEEECCCCccccccccchhccceeccCcCCCc--------eEEEEecCeeEEEECcH
Confidence 4679999999999999 99999999 99999999999863 57899999999999976
Q ss_pred CCcHHHHhhcC-CcEEEeCc-----cHhhhhhhhhhCCCEEEecCC-chHHHHHHHhhhhhcCccCCCCccccccccccc
Q psy3139 326 KITPVLRNYLG-DIVIKPYD-----LVWTDLPEFVRTGKCLYLPDE-ANFLLYAWMKNAETAGFQDDKGYHIEGYWYTWR 398 (708)
Q Consensus 326 kl~~~v~~~l~-~v~v~~Y~-----~~~~~L~~l~~~~~~I~id~~-~~~~l~~~l~~~~~ag~~~~~~~~~~~~~~~~~ 398 (708)
... ++++.++ ++++.... .+.+.|.+....+++|++|+. .+...++.+++
T Consensus 78 Y~~-QA~~ql~~~~~l~~~~~~~~~~~~~~l~~~l~~~~~vG~d~~~~s~~~~~~l~~---------------------- 134 (623)
T 3ctz_A 78 YFL-QAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAK---------------------- 134 (623)
T ss_dssp GHH-HHHHHBCTTEEEEETTSTTCCCHHHHHHHHCCTTCEEEECGGGSBHHHHHHHHH----------------------
T ss_pred HHH-HHHHhcCCceEEEEecCCCCccHHHHHHHhCcCCCEEEECcccccHHHHHHHHH----------------------
Confidence 543 4566663 56665432 445666654334689999998 78888877663
Q ss_pred cccccccccCCC--CCeeeeC-CchhHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3139 399 TAVDRWSIDEVP--PLKLLTG-PSPVKDL---KAYKNSAEAKGMRNSQIKDALVWVRLVHRIEK 456 (708)
Q Consensus 399 ~a~~~~~~~~l~--~~~~v~~-~~pI~~l---RaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~ 456 (708)
.++ +.++++. .++|..+ |.+|++.| .++.+....+.++.+-+..+++
T Consensus 135 ---------~l~~~~~~lv~~~~~lvd~iw~~Rp~k~~~e--~~~~~~~~ag~~~~~rl~~lr~ 187 (623)
T 3ctz_A 135 ---------VLRSAGHHLIPVKENLVDKIWTDRPERPCKP--LLTLGLDYTGISWKDKVADLRL 187 (623)
T ss_dssp ---------HHHHTTCEEEECSSCHHHHHCTTCCCCCCCC--CEECCHHHHSSCHHHHHHHHHH
T ss_pred ---------HHHhcCCEEEecCCCcHHHHhhcCCCCCchh--hhhcchhhcChhHHHHHHHHHH
Confidence 122 2367777 5999999 99999999 7777666666555544444444
No 57
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=98.59 E-value=2.5e-08 Score=111.69 Aligned_cols=142 Identities=13% Similarity=0.071 Sum_probs=87.7
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccC--------CceEEEE
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTG--------ESGQGVV 110 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftg--------s~g~~~v 110 (708)
...+||++||+.|+++++||+||++. .+++|||||+| +.+.+||
T Consensus 78 ~~~~Rl~rlr~~m~~~glDalli~~~----------------------------~ni~YlTGf~g~~~~~~~~~~~~llV 129 (470)
T 4b28_A 78 MRRFRHRRLTDHVVARGYAGLLMFDP----------------------------LNIRYATDSTNMQLWNTHNPFRATLL 129 (470)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECSH----------------------------HHHHHHHCCCSSHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCC----------------------------CcceeecCCCCCcccccCCCCEEEEE
Confidence 45789999999999999999999765 26999999998 5689999
Q ss_pred eCCccEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceec-cccCCCCCCHH
Q psy3139 111 TQTTAVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVG-FFGHVKSPNMN 189 (708)
Q Consensus 111 t~~~a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 189 (708)
+++.+.+|+|+||........+.. -.+ +.. .++.|... . ..+. .... -...+.
T Consensus 130 ~~dg~~~l~d~r~~~~l~~~~~~~-~~~-~~~--------------------~~~~~~~~--~-~~~~~~~~~-~~~~l~ 183 (470)
T 4b28_A 130 CADGYMVMWDYKNSPFLSEFNPLV-REQ-RAG--------------------ADLFYFDR--G-DKVDVAADV-FANEVR 183 (470)
T ss_dssp ETTSCEEEECCTTCGGGGTTCTTS-CEE-ECC--------------------CCCSHHHH--G-GGHHHHHHH-HHHHHH
T ss_pred ECCCCEEEEecchhhhhhhhhhHH-HHH-Hhc--------------------CCeeeecc--C-ccccccchh-HHHHHH
Confidence 999999999999955333221100 011 110 00001000 0 0000 0000 000233
Q ss_pred HHHHHhccCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 190 QWIATHAKYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 190 ~~l~~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
+.|++.....++||+|+. ++..++.|.+ .+++++.. .++++.++.
T Consensus 184 ~~l~~~~~~~~~igve~~--~~~~~~~L~~----~~~~~vd~-~~~v~~lR~ 228 (470)
T 4b28_A 184 ILLRDHAPGLRRLAVDKV--MLHGLRALQA----QGFEIMDG-EEVTEKARS 228 (470)
T ss_dssp HHHHHHSTTCCEEEESSC--CHHHHHHHHH----TTCEEEEH-HHHHHHHHT
T ss_pred HHHHHhCccCceeeeCcc--hHHHHHHHHc----CCCEEEEc-HHHHHHHHh
Confidence 455554334689999985 5666666654 47888887 588888763
No 58
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=98.37 E-value=8.3e-07 Score=96.96 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=95.7
Q ss_pred cCHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCC----ceEEEEeCC
Q psy3139 38 SDVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGE----SGQGVVTQT 113 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs----~g~~~vt~~ 113 (708)
..+.+|+++||+.|+++++|+++|.+.+ ++.|+|||..+ ...++|+.+
T Consensus 21 ~e~~~R~~~l~~~m~~~~~da~li~~~~----------------------------ni~yltg~~~~~~~~~~~llv~~~ 72 (401)
T 1chm_A 21 QEYANRQARLRAHLAAENIDAAIFTSYH----------------------------NINYYSDFLYCSFGRPYALVVTED 72 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSHH----------------------------HHHHHHSCCCCCTTCCCEEEECSS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEeCcc----------------------------cceeeCCCCcCCCCCeEEEEEecC
Confidence 3578999999999999999999997532 48999999652 246678999
Q ss_pred ccEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHH
Q psy3139 114 TAVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIA 193 (708)
Q Consensus 114 ~a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 193 (708)
..+|++|++|..++.++..+.. .+.-.+ . ...++.+.|+
T Consensus 73 ~~~l~~~~~~~~~~~~~~~~~~-~v~~~~--------------------------------------~--~~~~~~~~l~ 111 (401)
T 1chm_A 73 DVISISANIDGGQPWRRTVGTD-NIVYTD--------------------------------------W--QRDNYFAAIQ 111 (401)
T ss_dssp CEEEEEEGGGTTHHHHHCCSSE-EEEECT--------------------------------------T--STTHHHHHHH
T ss_pred CCEEEecccchhhHHHhhcccc-eeeecc--------------------------------------c--cccCHHHHHH
Confidence 9999999999888654433211 111110 0 0124567787
Q ss_pred HhccCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 194 THAKYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 194 ~~~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
+.++..++||+|+..+++..++.|.+.+. +.+++.. .++++.++.
T Consensus 112 ~~l~~~~~i~ve~~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~~R~ 156 (401)
T 1chm_A 112 QALPKARRIGIEHDHLNLQNRDKLAARYP--DAELVDV-AAACMRMRM 156 (401)
T ss_dssp HHCSCCSEEEECTTTCBHHHHHHHHHHCT--TCEEEEC-HHHHHHHHT
T ss_pred HHhccCCeEEEecCCCCHHHHHHHHhhCC--CCEEEEh-HHHHHHHHh
Confidence 77766679999999999999999887653 4577776 578887763
No 59
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=98.35 E-value=6.9e-07 Score=96.21 Aligned_cols=124 Identities=12% Similarity=0.151 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCC-----ceEEEEeCCc-c
Q psy3139 42 QRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGE-----SGQGVVTQTT-A 115 (708)
Q Consensus 42 ~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs-----~g~~~vt~~~-a 115 (708)
+|+++||+.|+++++|+++|.+.+ +++|||||.+. .+.++|+++. .
T Consensus 1 ~R~~~l~~~m~~~~~d~~li~~~~----------------------------n~~yltG~~~~~~~~~~~~l~i~~~~~~ 52 (356)
T 1wn1_A 1 MRLEKFIHLLGERGFDGALISPGT----------------------------NLYYLTGLRLHEVGERLAILAVSAEGDY 52 (356)
T ss_dssp CHHHHHHHHHHHTTCSEEEECSSH----------------------------HHHHHHCCCCSCCTTSCCEEEEETTSCE
T ss_pred CHHHHHHHHHHHCCCcEEEECCCc----------------------------cceeecCCcCCCCCCceEEEEEeCCCcE
Confidence 489999999999999999997542 59999999754 5788999876 9
Q ss_pred EEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCCCCCHHHHHHHh
Q psy3139 116 VLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVKSPNMNQWIATH 195 (708)
Q Consensus 116 ~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 195 (708)
+|++|.+|..+++. +++.... + .......+.++|++.
T Consensus 53 ~l~~~~~~~~~~~~------~~v~~~~--------~-----------------------------~~~~~~~l~~~l~~~ 89 (356)
T 1wn1_A 53 RFLAPSLYENVVNN------FPATFWH--------D-----------------------------GENPYAKLREILEEL 89 (356)
T ss_dssp EEEEEGGGTTTTTT------SCEEEEC--------T-----------------------------TSCHHHHHHHHHHHT
T ss_pred EEEECcccHHHhhC------CeEEEEc--------C-----------------------------CCCHHHHHHHHHHHh
Confidence 99999999877654 2222210 0 000001233344332
Q ss_pred ccCCCeEEECCCcccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 196 AKYTDKIASDPLKWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 196 ~~~~~~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
....++||+| ..++...++.|.+. .+.+++.. .++++.++.
T Consensus 90 ~~~~~~i~~~-~~~~~~~~~~l~~~---~~~~~~~~-~~~i~~~R~ 130 (356)
T 1wn1_A 90 GISKGRILIE-DTMRADWLIGIMKL---GKFTFQPL-SSLIKELRM 130 (356)
T ss_dssp TCSSEEEEEC-TTSBHHHHHHHGGG---SCEEEEET-HHHHHHHHT
T ss_pred cCCCCEEEEe-CCcCHHHHHHHHcC---CCCeEEEc-HHHHHHHHh
Confidence 1135689999 77888888877653 35677776 578887763
No 60
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=97.59 E-value=3.5e-05 Score=85.23 Aligned_cols=140 Identities=9% Similarity=0.050 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeCC----c-
Q psy3139 40 VNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQT----T- 114 (708)
Q Consensus 40 ~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~~----~- 114 (708)
..+|.++|.+.|.++ +..|+++++.. +-|..++|.= -.+.+.+|||||++.++.+|++++ +
T Consensus 6 ~~~RR~~l~~~l~~~--~~~i~~~~~~~-----~~~~d~~~~f-------rq~s~f~YltG~~~~~~~~v~~~~~~~~~~ 71 (427)
T 3ig4_A 6 FAQNRERLVNTLPDE--SITILFAGQAP-----HMSADAHYKF-------VPNRNFYYVTGIDEPNVIFMLKKFGNSVEE 71 (427)
T ss_dssp HHHHHHHHHTTSCSS--EEEEEECCCCC-----EEETTEECCC-------CCCHHHHHHHCCCSTTCEEEEEEETTEEEE
T ss_pred HHHHHHHHHHhCcCC--CEEEEECCCcc-----ccCCCCCCcc-------cCCCCeEEeeCCCCCCEEEEEEccCCCceE
Confidence 578888898888654 45677776542 1234456654 557789999999999999998662 2
Q ss_pred ----------cEEEeccccHHHHhcccCCCceEEEEecccCccccccCCCCCCCCcccccccccccccccceeccccCCC
Q psy3139 115 ----------AVLWTEAKYWERADSELSGTEWTLCRTDFTGRLTAKSNQSGASPRNVATSFGYIQRSMTDKVVGFFGHVK 184 (708)
Q Consensus 115 ----------a~l~td~rY~~qa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (708)
..+|++.||..|+.++..+ +.....
T Consensus 72 ~lfv~~~~~~~~~w~g~r~~~~~a~~~~~--~~~v~~------------------------------------------- 106 (427)
T 3ig4_A 72 TLFIEKSDPVMEKWVGKTVSNEEAEKISG--IKKVIY------------------------------------------- 106 (427)
T ss_dssp EEEECCCCTTGGGTTCCCCCHHHHHHHHC--CSEEEE-------------------------------------------
T ss_pred EEEecCCCccceEEeCCCCcHHHHHhcCC--CCEEEE-------------------------------------------
Confidence 3445679999999888876 332222
Q ss_pred CCCHHHHHHHhccC--CCeEEECCC--------cccHHHHHHHHHHHHhCCCEEEecchhhhhhhcC
Q psy3139 185 SPNMNQWIATHAKY--TDKIASDPL--------KWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWY 241 (708)
Q Consensus 185 ~~~~~~~l~~~~~~--~~~~~~d~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~ 241 (708)
..++.+.|.+.++. .++|+++.. .+++..++.|.+.+. +.+++.+ ..+++.++.
T Consensus 107 ~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~-~~~i~~lR~ 170 (427)
T 3ig4_A 107 LDSFEKTMSNIFFTENVKHLYLDLECREWKGTETKTLAFAKHVREQYP--HVTIGNV-YPNICELRV 170 (427)
T ss_dssp GGGHHHHHHHHHTTTCCCEEEECCCCCCTTCCCCHHHHHHHHHHHHCT--TCEEEEC-HHHHHHHHT
T ss_pred hhhHHHHHHHHHhcCCCcEEEEeCCccccccccccCHHHHHHHHhhCC--CCeEeEh-HHHHHHHHh
Confidence 12456677666555 678999854 345667777776653 4678777 578888763
No 61
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=97.48 E-value=0.00011 Score=81.34 Aligned_cols=73 Identities=15% Similarity=0.267 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeC-----C
Q psy3139 39 DVNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQ-----T 113 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~-----~ 113 (708)
...+|+++||+.|++++ +++|+.+.+... +...+|.= -.+.+.+|||||++..+.++|++ +
T Consensus 7 e~~~R~~~l~~~m~~~~-~~ll~~~~~~~r------~~D~~y~f-------rq~~n~~YltG~~~~~~~lvi~~~~~~~~ 72 (440)
T 2v3z_A 7 EFQRRRQALVEQMQPGS-AALIFAAPEVTR------SADSEYPY-------RQNSDFWYFTGFNEPEAVLVLIKSDDTHN 72 (440)
T ss_dssp HHHHHHHHHHHHSCSSE-EEEEECCCCCEE------ETTEECCC-------CCCHHHHHHHCCCCSSCEEEEEECSSSCE
T ss_pred HHHHHHHHHHHhcccCC-EEEEECCCcccc------CCCCCCcc-------cCCCCEEEecCCCCCCEEEEEEecCCCCc
Confidence 46789999999999887 777665543211 23345542 23458999999999999999986 3
Q ss_pred ccEEEeccccHH
Q psy3139 114 TAVLWTEAKYWE 125 (708)
Q Consensus 114 ~a~l~td~rY~~ 125 (708)
+++||++.++..
T Consensus 73 ~~~Lf~~~~~~~ 84 (440)
T 2v3z_A 73 HSVLFNRVRDLT 84 (440)
T ss_dssp EEEEEECCCCHH
T ss_pred eEEEEecCCCcc
Confidence 689998887644
No 62
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=91.69 E-value=0.22 Score=55.71 Aligned_cols=74 Identities=14% Similarity=0.155 Sum_probs=52.5
Q ss_pred cCHHHHHHHHHHHHHhcCC----cEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccCCceEEEEeC-
Q psy3139 38 SDVNQRLSLLRSVMRSRGV----SVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTGESGQGVVTQ- 112 (708)
Q Consensus 38 ~~~~~rl~~lr~~m~~~~~----~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftgs~g~~~vt~- 112 (708)
....+|+++|++.|++++. |++||.++..... -+..++|.= -.+.+..|||||...+..+||..
T Consensus 22 ~e~~~Rr~~l~~~~~~~~~~~~~~~~il~~~~~~~~----~~~d~~y~f-------rq~s~f~YLtG~~~p~~~~vi~~~ 90 (494)
T 2iw2_A 22 ALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQR----YCTDTGVLF-------RQESFFHWAFGVTEPGCYGVIDVD 90 (494)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCTTCEEEEECCCCEES----TTSCCEECC-------CCCHHHHHHHCCCSSSCEEEEETT
T ss_pred HHHHHHHHHHHHHHHhhhcccCceEEEEeCCcceee----cCCCCCCCc-------cCCcceeeecCCCCCCeEEEEEcc
Confidence 4578999999999998854 6888877643210 012345653 35667899999999888888853
Q ss_pred -CccEEEeccc
Q psy3139 113 -TTAVLWTEAK 122 (708)
Q Consensus 113 -~~a~l~td~r 122 (708)
++.+||+..+
T Consensus 91 ~~~~~L~~~~~ 101 (494)
T 2iw2_A 91 TGKSTLFVPRL 101 (494)
T ss_dssp TCCEEEEECCC
T ss_pred CCeEEEEECCC
Confidence 6788888544
No 63
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=59.46 E-value=23 Score=37.25 Aligned_cols=77 Identities=10% Similarity=0.092 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-CccccCCcE
Q psy3139 546 QRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NSTLNINFF 616 (708)
Q Consensus 546 qr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~~Le~GMV 616 (708)
.|++-..+-+++.++...+. ||++-.+||.++.+.+.+.|.. |.....-|... ...|-.| +.+|++|.+
T Consensus 72 mR~A~~i~~~a~~~~~~~ik-pG~te~el~~~~~~~~~~~g~~~~~~~~~~fp~iv~~g~n~-~~~H~~~~~~~l~~GD~ 149 (337)
T 4fuk_A 72 IKTVCQLSREVLDIATAAAK-PGITTDELDRIVHEATVERNMYPSPLNYYGFPKSVCTSVNE-VICHGIPDSRELEEGDI 149 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-TTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT-EEECCCCCSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHcc-CCCCHHHHHHHHHHHHHHcCCCccCCCCCCcCceeeccccc-cccCCCCCCccccCCCE
Confidence 45666666777777776665 5999999999999988888752 33333333332 1346666 578999999
Q ss_pred EeeCCccc
Q psy3139 617 GVVEPEYL 624 (708)
Q Consensus 617 ~SiEPGiY 624 (708)
+.+.-|.+
T Consensus 150 v~iD~g~~ 157 (337)
T 4fuk_A 150 LNIDVSSY 157 (337)
T ss_dssp EEEEEEEE
T ss_pred EEEeccee
Confidence 99987765
No 64
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=56.51 E-value=21 Score=39.29 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccC-CceEEEEeCC-ccEE
Q psy3139 40 VNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTG-ESGQGVVTQT-TAVL 117 (708)
Q Consensus 40 ~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftg-s~g~~~vt~~-~a~l 117 (708)
..++.+++|+.|++.+.|+++|.++.+..- -+..++|.= -.+..-+|+|||+- .++.++|..+ +..|
T Consensus 12 ~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~----~~~D~~~~f-------rq~~~f~yl~g~~e~p~~~L~~~~~~~~~l 80 (451)
T 3rva_A 12 IEELQARTREALQREGLDGLVIHSGQGKRL----FLDDNHYPF-------KVNPQFKAWVPVIDNPNCWLVVNGVDKPTL 80 (451)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEECCCCCBC----TTSSCBCCC-------CCCHHHHTTCSCCSCSSCEEEECSSSCCEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCceEE----ecCCCCCCc-------ccCCCceEEeccCCCCCEEEEEecCCCeEE
Confidence 567778899999999999988877643311 122334443 33444579999986 5566666433 4455
Q ss_pred Ee
Q psy3139 118 WT 119 (708)
Q Consensus 118 ~t 119 (708)
|.
T Consensus 81 ~~ 82 (451)
T 3rva_A 81 IF 82 (451)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 65
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=52.91 E-value=35 Score=34.24 Aligned_cols=76 Identities=13% Similarity=-0.039 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-CccccCCcEE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NSTLNINFFG 617 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~~Le~GMV~ 617 (708)
|++-..+-+++.++...+. ||++-.+|++.++..+.+.|-. |...+.-|... ...|-.| +.+|++|.++
T Consensus 14 r~A~~i~~~a~~~~~~~ik-pG~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~v~~g~~~-~~~H~~~~~~~l~~Gdlv 91 (264)
T 3tb5_A 14 DESGELLADVHRHLRTFIK-PGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSIND-EICHGFPRKKVLKDGDLI 91 (264)
T ss_dssp HHHHHHHHHHHHHHHHHCC-TTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCCSEEEEETT-EEECCCCCSCBCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhCc-CCCCHHHHHHHHHHHHHHcCCCcccccccCCCcceEECCcc-cccCCCCCCccccCCCEE
Confidence 4445555667777776665 5999999999999999888852 22222233332 1346556 5789999999
Q ss_pred eeCCccc
Q psy3139 618 VVEPEYL 624 (708)
Q Consensus 618 SiEPGiY 624 (708)
.+.-|..
T Consensus 92 ~iD~g~~ 98 (264)
T 3tb5_A 92 KVDMCVD 98 (264)
T ss_dssp EEEEEEE
T ss_pred EEeccce
Confidence 9886653
No 66
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=48.45 E-value=54 Score=35.20 Aligned_cols=76 Identities=12% Similarity=0.039 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-CccccCCcEE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NSTLNINFFG 617 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~~Le~GMV~ 617 (708)
|++...+-+++.++...+ .+|++-.+|+..+.+.+.+.|.. |.-.++=|+-. .-.|--| +.+|++|.++
T Consensus 113 R~A~~ia~~al~~~~~~i-kpGvTE~El~~~~~~~~~~~Ga~ps~l~y~~Fp~iv~sg~N~-~i~H~~p~~r~L~~GDiV 190 (368)
T 3s6b_A 113 REACILGRKTLDYAHTLV-SPGVTTDEIDRKVHEFIIKNNAYPSTLNYYKFPKSCCTSVNE-IVCHGIPDYRPLKSGDII 190 (368)
T ss_dssp HHHHHHHHHHHHHHHHTC-CTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETT-EEECCCCCSCBCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHc-cCCCCHHHHHHHHHHHHHHcCCccccccccCCCCeEEEcCcc-ccccCCCCCccccCCCEE
Confidence 334444445555555555 45999999999999999998852 22222223321 1246556 5789999999
Q ss_pred eeCCccc
Q psy3139 618 VVEPEYL 624 (708)
Q Consensus 618 SiEPGiY 624 (708)
.+.-|.+
T Consensus 191 ~iD~G~~ 197 (368)
T 3s6b_A 191 NIDISVF 197 (368)
T ss_dssp EEEEEEE
T ss_pred EEEEeEE
Confidence 9887665
No 67
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=46.18 E-value=68 Score=33.70 Aligned_cols=80 Identities=10% Similarity=0.003 Sum_probs=50.7
Q ss_pred CHHHHHH----HHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-Cc
Q psy3139 543 TPLQRSV----YTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NS 609 (708)
Q Consensus 543 t~eqr~~----yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~ 609 (708)
++++.+. ...+-+++.++...+ .+|++-.+|+..+.+.+.+.|.. |.-...-|+-. .-.|--| +.
T Consensus 77 s~~EI~~mR~A~~ia~~al~~~~~~i-~pGvte~el~~~~~~~~~~~G~~~~~~~y~~fp~iv~sg~n~-~~~H~~p~~~ 154 (329)
T 2b3h_A 77 SSEDIEGMRLVCRLAREVLDVAAGMI-KPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNE-VICHGIPDRR 154 (329)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTC-CTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT-EEECCCCCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcHHHHHHHHHHHHHHcCCccccccccCCCCeEEecCCC-CcCCCCCCCc
Confidence 5555444 444445566655554 56999999999999999988852 22222223322 1245556 57
Q ss_pred cccCCcEEeeCCccc
Q psy3139 610 TLNINFFGVVEPEYL 624 (708)
Q Consensus 610 ~Le~GMV~SiEPGiY 624 (708)
+|++|.++.+.-|.+
T Consensus 155 ~L~~GDiv~iD~G~~ 169 (329)
T 2b3h_A 155 PLQEGDIVNVDITLY 169 (329)
T ss_dssp BCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEEeeEE
Confidence 899999998876654
No 68
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=44.77 E-value=47 Score=37.34 Aligned_cols=69 Identities=9% Similarity=-0.002 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeCCCCCcccccCCCCCCccccccccCCCCccccccccccccC-CceEEEEeCC-ccEE
Q psy3139 40 VNQRLSLLRSVMRSRGVSVYIIVNGDDHQVSIIPGNQGNSYVCTKTKQHGPWDKRLEYISGFTG-ESGQGVVTQT-TAVL 117 (708)
Q Consensus 40 ~~~rl~~lr~~m~~~~~~~~ii~~~d~h~~~~~~~~~~~Ey~~~~~~~~~~~~~~~~~~sgftg-s~g~~~vt~~-~a~l 117 (708)
..++.+++++.|++.+.|+++|.++.+..- -+..++|.= -.+..-+|+|||+- .++.+++..+ +..|
T Consensus 12 ~~~~~~r~~~~l~~~~~~~~~i~~~~~~~~----~~~D~~~pF-------rq~s~F~yl~g~~e~p~~~l~~~~~~~~~l 80 (517)
T 3l24_A 12 IATLQKRTREIIERENLDGVVFHSGQAKRQ----FLDDMYYPF-------KVNPQFKAWLPVIDNPHCWIVANGTDKPKL 80 (517)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCCCBC----TTSSCBCCC-------CCCHHHHTTSSCCSCSSCEEEECSSSCCEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCceEE----ecCCCCCCc-------eecCCceEEeccCCCCCEEEEEecCCCeEE
Confidence 456778899999999999988877644321 122344543 33444579999986 5566666432 4455
Q ss_pred Ee
Q psy3139 118 WT 119 (708)
Q Consensus 118 ~t 119 (708)
|.
T Consensus 81 ~~ 82 (517)
T 3l24_A 81 IF 82 (517)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 69
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=38.62 E-value=40 Score=35.86 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCCC-CCC----CceecCCCCccccCC-----CccccCCc
Q psy3139 546 QRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALDY-RPQ----RVHSIGEFLLVQEDF-----NSTLNINF 615 (708)
Q Consensus 546 qr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~y-~HG----tGHGVG~~L~VHEgP-----~~~Le~GM 615 (708)
.|++-+...+++..+...+. ||++-.+||..+.+.+.+.|..- .-| +.=+|+. --+|--| +.+|++|.
T Consensus 48 ~R~Aa~I~~~v~~~~~~~ik-pG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~-~v~Hg~P~~~~~~~~L~~GD 125 (358)
T 3fm3_A 48 ARRAAEAHRRARYRVQSIVR-PGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNS-CAAHYTVNPGEQDIVLKEDD 125 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-TTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETT-EEECCCCCTTCCCCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCC-EEEecCCCCCCCCeEecCCC
Confidence 46666666677766666555 59999999999988887766421 001 1112221 0124334 46899999
Q ss_pred EEeeCCccc
Q psy3139 616 FGVVEPEYL 624 (708)
Q Consensus 616 V~SiEPGiY 624 (708)
++.+--|.+
T Consensus 126 iV~ID~G~~ 134 (358)
T 3fm3_A 126 VLKIDFGTH 134 (358)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeeEE
Confidence 999987775
No 70
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=38.14 E-value=1.1e+02 Score=30.61 Aligned_cols=75 Identities=11% Similarity=0.029 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-CccccCCcEE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NSTLNINFFG 617 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~~Le~GMV~ 617 (708)
|++-..+-+++.++... ..+|++-.+|+....+.+.+.|.. |..-+.=|.-. ...|-.| +.+|++|.++
T Consensus 18 r~A~~i~~~~~~~~~~~-i~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~-~~~H~~p~~~~l~~Gd~v 95 (262)
T 3mx6_A 18 RAAGKLAAETLDFITDH-VKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINH-VVCHGIPNDKPLKNGDIV 95 (262)
T ss_dssp HHHHHHHHHHHHHHGGG-CCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT-EEECCCCCSCBCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHH-cCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEecccc-cccCCCCCCcccCCCCEE
Confidence 33344444555555544 456999999999999999888752 22222222221 1246556 5789999998
Q ss_pred eeCCcc
Q psy3139 618 VVEPEY 623 (708)
Q Consensus 618 SiEPGi 623 (708)
.+.-|.
T Consensus 96 ~iD~G~ 101 (262)
T 3mx6_A 96 NIDVTV 101 (262)
T ss_dssp EEEEEE
T ss_pred EEEeeE
Confidence 887554
No 71
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=38.04 E-value=72 Score=32.84 Aligned_cols=76 Identities=14% Similarity=0.025 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--CCCCCceecCCCCccccCC----CccccCCcEEe
Q psy3139 545 LQRSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--YRPQRVHSIGEFLLVQEDF----NSTLNINFFGV 618 (708)
Q Consensus 545 eqr~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y~HGtGHGVG~~L~VHEgP----~~~Le~GMV~S 618 (708)
..|++-..+-+++.++...+. ||++-.+|+..+.+.+.+.|.. |+ +-=+++.. .+|--| +.+|++|.++.
T Consensus 5 ~mr~A~~i~~~~l~~~~~~i~-pG~te~el~~~~~~~~~~~G~~~~fp--~~vs~n~~-~~H~~p~~~~~~~L~~GDiv~ 80 (295)
T 1xgs_A 5 KLMKAGEIAKKVREKAIKLAR-PGMLLLELAESIEKMIMELGGKPAFP--VNLSINEI-AAHYTPYKGDTTVLKEGDYLK 80 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-TTCBHHHHHHHHHHHHHHTTCEESSC--CEEEETTE-EECCCCCTTCCCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHcCCCCCCC--cEEeeCCc-cccccCCCCCCccccCCCEEE
Confidence 356666777777777766655 5999999999999999998864 43 22234431 346666 36899999999
Q ss_pred eCCccc
Q psy3139 619 VEPEYL 624 (708)
Q Consensus 619 iEPGiY 624 (708)
+.-|..
T Consensus 81 iD~G~~ 86 (295)
T 1xgs_A 81 IDVGVH 86 (295)
T ss_dssp EEEEEE
T ss_pred EEEeEE
Confidence 886653
No 72
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=36.96 E-value=1.4e+02 Score=29.36 Aligned_cols=75 Identities=9% Similarity=0.039 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-CccccCCcEE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NSTLNINFFG 617 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~~Le~GMV~ 617 (708)
|++-..+-+++.++...+ .+|++-.+|+....+.+.+.|.. |..-+.=|... .-.|-.| +.+|++|.++
T Consensus 13 r~A~~i~~~~~~~~~~~i-~~G~te~el~~~~~~~~~~~g~~~~~~~~~~f~~~v~~g~n~-~~~H~~p~~~~l~~gd~v 90 (252)
T 1qxy_A 13 KEIGYICAKVRNTMQAAT-KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNE-EVAHGIPSKRVIREGDLV 90 (252)
T ss_dssp HHHHHHHHHHHHHHHHHC-CTTCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETT-EEECCCCCSCBCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHC-CCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEEcCCc-cccCCCCCCcCcCCCCEE
Confidence 333444445555555554 56999999999999988887752 33223222222 1246556 5789999999
Q ss_pred eeCCcc
Q psy3139 618 VVEPEY 623 (708)
Q Consensus 618 SiEPGi 623 (708)
.+.-|.
T Consensus 91 ~iD~g~ 96 (252)
T 1qxy_A 91 NIDVSA 96 (252)
T ss_dssp EEEEEE
T ss_pred EEEeeE
Confidence 887654
No 73
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=36.84 E-value=1.3e+02 Score=30.60 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=48.8
Q ss_pred CHHHHHH----HHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC-Cc
Q psy3139 543 TPLQRSV----YTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF-NS 609 (708)
Q Consensus 543 t~eqr~~----yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~~ 609 (708)
++++.+. ...+-+++.++...+ .+|++-.+|+......+.+.|.. |..-++-|.-. ...|-.| +.
T Consensus 43 s~~EI~~~r~A~~i~~~a~~~~~~~i-~pG~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~-~~~H~~p~~~ 120 (285)
T 3pka_A 43 TPEVIEKMRVAGRIAAGALAEAGKAV-APGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNE-VICHGIPDST 120 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTC-CTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETT-EEECCCCCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcHHHHHHHHHHHHHHcCCccccccccCCCCceEecccc-eeecCCCCCc
Confidence 4554444 444445555555554 46999999999999999988853 21112222221 1246556 57
Q ss_pred cccCCcEEeeCCcc
Q psy3139 610 TLNINFFGVVEPEY 623 (708)
Q Consensus 610 ~Le~GMV~SiEPGi 623 (708)
+|++|.++.+.-|.
T Consensus 121 ~l~~Gd~v~iD~G~ 134 (285)
T 3pka_A 121 VITDGDIVNIDVTA 134 (285)
T ss_dssp BCCTTCEEEEEEEE
T ss_pred ccCCCCEEEEEEEE
Confidence 89999998887554
No 74
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=29.12 E-value=2.1e+02 Score=28.98 Aligned_cols=75 Identities=12% Similarity=0.060 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--------CCCCCceecCCCCccccCC--CccccCCcE
Q psy3139 547 RSVYTAILKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--------YRPQRVHSIGEFLLVQEDF--NSTLNINFF 616 (708)
Q Consensus 547 r~~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--------y~HGtGHGVG~~L~VHEgP--~~~Le~GMV 616 (708)
|++...+-+++.++...+. +|++-.+++......+.+.|.. |..-++-|.-. ...|-.| +.+|++|.+
T Consensus 44 r~A~~i~~~a~~~~~~~i~-~G~tE~el~~~~~~~~~~~G~~~~~~~~~~f~~iv~~g~n~-~~~H~~p~~~~~l~~Gd~ 121 (286)
T 3tav_A 44 AAAGSIVGAALVAVRDAAK-AGVSTLELDQVAESVIREAGAVPSFLGYHGFPASICSSVND-QVVHGIPSATAVLADGDL 121 (286)
T ss_dssp HHHHHHHHHHHHHHHHHCC-TTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETT-BCSCCCCCTTCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHHHcCCcccccccCCCCCceEEecCc-cccCCCCCCCcccCCCCE
Confidence 4445555556666665554 5999999999999999988753 22222333322 2356556 468999999
Q ss_pred EeeCCcc
Q psy3139 617 GVVEPEY 623 (708)
Q Consensus 617 ~SiEPGi 623 (708)
+.+.-|.
T Consensus 122 v~iD~G~ 128 (286)
T 3tav_A 122 VSIDCGA 128 (286)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8887554
No 75
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=28.16 E-value=1.8e+02 Score=28.81 Aligned_cols=73 Identities=14% Similarity=0.019 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHH-HHHcCCC--------CCCCCceecCCCCccccCC-C-ccccCCcEE
Q psy3139 549 VYTAILKGLIALVTTQFLPGSSLHRLEYLLEQP-LLALALD--------YRPQRVHSIGEFLLVQEDF-N-STLNINFFG 617 (708)
Q Consensus 549 ~yt~VLka~ial~~a~fp~G~~g~~lD~~AR~~-L~~~G~~--------y~HGtGHGVG~~L~VHEgP-~-~~Le~GMV~ 617 (708)
+-..+-+++.++... ..+|++-.+++...... +.+.|.. |..-+.=|.-. ...|-.| + .+|++|.++
T Consensus 16 A~~i~~~~~~~~~~~-i~~G~te~el~~~~~~~~~~~~g~~~~~~~~~~f~~iv~~g~n~-~~~H~~p~~~~~l~~gd~v 93 (263)
T 2gg2_A 16 AGRLAAEVLEMIEPY-VKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINE-VVCHGIPDDAKLLKDGDIV 93 (263)
T ss_dssp HHHHHHHHHHHHGGG-CSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETT-EEECCCCCTTCBCCTTCEE
T ss_pred HHHHHHHHHHHHHHH-cCCCCcHHHHHHHHHHHHHHHhCCccccccccCCCcceEecccc-cccCCCCCCCcCcCCCCEE
Confidence 333344455555444 45699999999999998 8877752 22222222221 1236556 3 689999998
Q ss_pred eeCCcc
Q psy3139 618 VVEPEY 623 (708)
Q Consensus 618 SiEPGi 623 (708)
.+.-|.
T Consensus 94 ~iD~G~ 99 (263)
T 2gg2_A 94 NIDVTV 99 (263)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887654
No 76
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=26.75 E-value=1.9e+02 Score=28.83 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=47.7
Q ss_pred CHHHHHHHHHH----HHHHHHHHHhcCCCCCchHHHHHHHHHHHHHcCCC--C------CCCCceecCCCCccccCC-Cc
Q psy3139 543 TPLQRSVYTAI----LKGLIALVTTQFLPGSSLHRLEYLLEQPLLALALD--Y------RPQRVHSIGEFLLVQEDF-NS 609 (708)
Q Consensus 543 t~eqr~~yt~V----Lka~ial~~a~fp~G~~g~~lD~~AR~~L~~~G~~--y------~HGtGHGVG~~L~VHEgP-~~ 609 (708)
++++.+.+..+ -+++.++... ..+|++-.+|+......+.+.|.. | ..-+.=|.-. ...|-.| +.
T Consensus 18 s~~Ei~~~r~A~~i~~~~~~~~~~~-i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~f~~~v~~g~n~-~~~H~~p~~~ 95 (262)
T 1o0x_A 18 TPSEIEKMKKAGKAVAVALREVRKV-IVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNE-EVVHGLPLKE 95 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHGGGG-CSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETT-BCSCCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCcHHHHHHHHHHHHHHcCCccccccccCCCcceEecccc-cccCCCCCCC
Confidence 45554444433 3444444443 456999999999999999888863 2 1112222222 1246556 56
Q ss_pred c-ccCCcEEeeCCcc
Q psy3139 610 T-LNINFFGVVEPEY 623 (708)
Q Consensus 610 ~-Le~GMV~SiEPGi 623 (708)
+ |++|.++.+.-|.
T Consensus 96 ~~l~~Gd~v~iD~G~ 110 (262)
T 1o0x_A 96 KVFKEGDIVSVDVGA 110 (262)
T ss_dssp CBCCTTCEEEEEEEE
T ss_pred cccCCCCEEEEEEEE
Confidence 7 9999998887554
No 77
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=23.92 E-value=65 Score=28.26 Aligned_cols=58 Identities=10% Similarity=0.158 Sum_probs=38.7
Q ss_pred cccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCC
Q psy3139 208 KWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSV 279 (708)
Q Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~ 279 (708)
.+|-.+++-|.-.+...| +.+.- +.|++.+|.+.+.. +..+...-+.++|++|++.+.
T Consensus 36 ~Lt~~E~~lL~~L~~~~g-~vvsr-~~L~~~vW~~~~~~------------~~~~l~~~I~rLRkkL~~~~~ 93 (120)
T 2z9m_A 36 ELTHREFELFHYLSKHMG-QVMTR-EHLLQTVWGYDYFG------------DVRTVDVTIRRLREKIEDDPS 93 (120)
T ss_dssp CCCHHHHHHHHHHHTTTT-CCEEH-HHHHHHHHCTTCCS------------CTHHHHHHHHHHHHHHCSSTT
T ss_pred eCCHHHHHHHHHHHHCCC-ceEcH-HHHHHHHhCCCCCC------------CcchHHHHHHHHHHHhhcCCC
Confidence 357778877776665554 44443 78999999643211 234667789999999987543
No 78
>3q9v_A DNA-binding response regulator; response regulator protein, DNA binding protein; 1.60A {Deinococcus radiodurans}
Probab=23.22 E-value=87 Score=28.32 Aligned_cols=59 Identities=10% Similarity=0.139 Sum_probs=39.8
Q ss_pred cccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCCC
Q psy3139 208 KWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSVD 280 (708)
Q Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~D 280 (708)
.+|-.+++-|.-.+...| +.+.- +.|++.+|.+.+.. ...+...-+.++|++|++.+.+
T Consensus 60 ~Lt~~E~~LL~~L~~~~g-~vvsr-e~L~~~vW~~~~~~------------~~~~l~~~I~rLRkkL~~~~~~ 118 (133)
T 3q9v_A 60 RLSPKEFDILALLIRQPG-RVYSR-QEIGQEIWQGRLPE------------GSNVVDVHMANLRAKLRDLDGY 118 (133)
T ss_dssp CCCHHHHHHHHHHTTSTT-CEEEH-HHHHHHHHTTCCCT------------TCCHHHHHHHHHHHHHHHTTCT
T ss_pred EcCHHHHHHHHHHHHCCC-ceEcH-HHHHHHHcCCCCCC------------cHHHHHHHHHHHHHHHhccCCC
Confidence 356778777765555444 45443 78999999764322 2245777899999999986544
No 79
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=23.01 E-value=37 Score=22.24 Aligned_cols=15 Identities=47% Similarity=0.713 Sum_probs=12.7
Q ss_pred CHHHHHHHHHHHHHh
Q psy3139 39 DVNQRLSLLRSVMRS 53 (708)
Q Consensus 39 ~~~~rl~~lr~~m~~ 53 (708)
+..+||.+||+.+++
T Consensus 12 dlqerlrklrkklrs 26 (27)
T 3twe_A 12 DLQERLRKLRKKLRS 26 (27)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 568899999999874
No 80
>1ynf_A Succinylarginine dihydrolase; 1.90A {Escherichia coli} SCOP: d.126.1.7 PDB: 1ynh_A* 1yni_A*
Probab=21.73 E-value=96 Score=33.77 Aligned_cols=50 Identities=6% Similarity=0.117 Sum_probs=39.9
Q ss_pred chhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCHHHHH
Q psy3139 419 SPVKDLKAYKNSAEAKGMRNSQIKDALVWVRLVHRIEKGIESGELWDELKVL 470 (708)
Q Consensus 419 ~pI~~lRaiKn~~EIe~~R~A~~~D~~Al~~~l~~l~~~i~~G~~~TE~eva 470 (708)
+.+.++|-+-|+.|++.+-.+...+..-+.++-.|++...+.- ++.-|++
T Consensus 374 PACLRLRVvl~~~El~Avnp~~lm~~~l~~~L~~wV~~hYRd~--L~~~DLa 423 (458)
T 1ynf_A 374 PACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDR--LTAADLA 423 (458)
T ss_dssp TTTTEEEEEECHHHHHHSCGGGBCSHHHHHHHHHHHHHHCCSC--BCGGGGG
T ss_pred cchheeeeeCCHHHHHhcCCceecCHHHHHHHHHHHHHhcccc--CChhhcc
Confidence 3467899999999999998887777777778888999888765 6666654
No 81
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=20.28 E-value=1.2e+02 Score=26.00 Aligned_cols=58 Identities=7% Similarity=0.051 Sum_probs=39.6
Q ss_pred cccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCCC
Q psy3139 208 KWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKSV 279 (708)
Q Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g~ 279 (708)
.++-.+++-|.-.+...| +.+.- +.|++.+|.+.+.. +..+...-+.++|++|.+.+.
T Consensus 31 ~Lt~~E~~lL~~L~~~~g-~~vsr-~~L~~~vW~~~~~~------------~~~~l~~~I~rLRkkL~~~~~ 88 (110)
T 1opc_A 31 PLTSGEFAVLKALVSHPR-EPLSR-DKLMNLARGREYSA------------MERSIDVQISRLRRMVEEDPA 88 (110)
T ss_dssp CCCHHHHHHHHHHHHSTT-CCEEH-HHHHHHHCCSSSCT------------TSSCHHHHHHHHHHHHCSCTT
T ss_pred EcCHHHHHHHHHHHHcCC-ceEcH-HHHHHHHcCCCCCC------------CcchHHHHHHHHHHHhhcCCC
Confidence 357778877766665544 44443 78999999754321 235677889999999987543
No 82
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=20.19 E-value=95 Score=26.12 Aligned_cols=57 Identities=12% Similarity=0.187 Sum_probs=37.8
Q ss_pred cccHHHHHHHHHHHHhCCCEEEecchhhhhhhcCCCCCCCCCcceecccccCCcchHhHHHHHHHHhhhCC
Q psy3139 208 KWEFSEWLNLDNYLRAHGLQLNLLTENLVDSIWYPKPSLPPSVVFIHPLEYAGEPWENKVQSMKDFMSSKS 278 (708)
Q Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~lv~~~~~~rp~~~~~~~~~~~~~~~G~~~~~Ki~rvr~~M~e~g 278 (708)
.++-.+++-|.-.+...| +.+.- +.+++.+|.+.+.. +..+...-+.++|++|++.+
T Consensus 28 ~Lt~~e~~lL~~L~~~~g-~~vsr-~~L~~~vw~~~~~~------------~~~~l~~~I~rLRkkL~~~~ 84 (102)
T 3zq7_A 28 HLTPIEFRLLAVLLNNAG-KVLTQ-RQLLNQVWGPNAVE------------HSHYLRIYMGHLRQKLEQDP 84 (102)
T ss_dssp CCCHHHHHHHHHHHHTTT-CEEEH-HHHHHHHTSSSCST------------THHHHHHHHHHHHHHHCSST
T ss_pred EcCHHHHHHHHHHHHCCC-eeECH-HHHHHHhcCCCCCC------------ccchHHHHHHHHHHHhhcCC
Confidence 356778876665555544 45443 78999999743221 12356777999999998754
Done!