Your job contains 1 sequence.
>psy3140
MTAIESFVTSIDEKTVDREKTCPLLLRVFTNFGKHNNVSDFHNGFPPNQLQIYTWMDATL
RELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKTLQQCR
FIIGDYMDVKILTPKRNR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3140
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0024491 - symbol:Bin1 "Bicoid interacting protein ... 375 1.3e-34 1
UNIPROTKB|Q90ZH5 - symbol:chSAP18 "Uncharacterized protei... 357 1.1e-32 1
UNIPROTKB|G3X7E1 - symbol:SAP18 "Histone deacetylase comp... 357 1.1e-32 1
UNIPROTKB|Q3T022 - symbol:SAP18 "Histone deacetylase comp... 357 1.1e-32 1
UNIPROTKB|I3LF36 - symbol:SAP18 "Uncharacterized protein"... 357 1.1e-32 1
UNIPROTKB|O00422 - symbol:SAP18 "Histone deacetylase comp... 356 1.4e-32 1
RGD|1310388 - symbol:Sap18 "Sin3-associated polypeptide 1... 356 1.4e-32 1
TAIR|locus:2043704 - symbol:SAP18 "SIN3 associated polype... 277 3.3e-24 1
GENEDB_PFALCIPARUM|MAL7P1.37 - symbol:MAL7P1.37 "sin3 ass... 187 1.6e-13 1
UNIPROTKB|Q8IBX6 - symbol:MAL7P1.37 "Sin3 associated poly... 187 1.6e-13 1
POMBASE|SPCC126.13c - symbol:SPCC126.13c "histone deacety... 107 3.4e-06 1
>FB|FBgn0024491 [details] [associations]
symbol:Bin1 "Bicoid interacting protein 1" species:7227
"Drosophila melanogaster" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003714 "transcription
corepressor activity" evidence=IGI;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016580 "Sin3 complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0006342 "chromatin silencing" evidence=IGI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] EMBL:AE014297 GO:GO:0007275
GO:GO:0003714 GO:GO:0006351 GO:GO:0006342 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 CTD:274 GO:GO:0016580 eggNOG:NOG249491
KO:K14324 OMA:DISITPP InterPro:IPR017250 InterPro:IPR010516
PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637 EMBL:AF297546
EMBL:AY070913 EMBL:BT025229 EMBL:AJ278500 RefSeq:NP_524377.1
UniGene:Dm.20197 ProteinModelPortal:Q9VEX9 SMR:Q9VEX9
DIP:DIP-19160N IntAct:Q9VEX9 MINT:MINT-806704 STRING:Q9VEX9
PaxDb:Q9VEX9 PRIDE:Q9VEX9 EnsemblMetazoa:FBtr0083279 GeneID:41965
KEGG:dme:Dmel_CG6046 FlyBase:FBgn0024491
GeneTree:ENSGT00390000003152 InParanoid:Q9VEX9 OrthoDB:EOG4BVQ9X
PhylomeDB:Q9VEX9 GenomeRNAi:41965 NextBio:826507 Bgee:Q9VEX9
GermOnline:CG6046 Uniprot:Q9VEX9
Length = 150
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 72/141 (51%), Positives = 102/141 (72%)
Query: 1 MTAIESFVTSIDEKT----VDREKTCPLLLRVFTNFGKHNNVSDFHNG-FPPNQLQIYTW 55
M +ES + ++EKT +DREKTCP+LLRVF + G+H++VS++ G P N+LQIYTW
Sbjct: 1 MANVESMI--VEEKTQVKQIDREKTCPMLLRVFCSTGRHHSVSEYMFGNVPTNELQIYTW 58
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
DATL ELT+L+R+VNP+ +++GT F F ++ P ++ F +R+IG T GQKG DDNKT
Sbjct: 59 QDATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCTGQKGIDDNKT 118
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
L Q +F IGD++D+ I P R
Sbjct: 119 LAQAKFSIGDFLDISITPPNR 139
>UNIPROTKB|Q90ZH5 [details] [associations]
symbol:chSAP18 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] GO:GO:0005886 GO:GO:0005634
eggNOG:NOG249491 HOGENOM:HOG000238745 KO:K14324 OMA:DISITPP
InterPro:IPR017250 InterPro:IPR010516 PANTHER:PTHR13082
Pfam:PF06487 PIRSF:PIRSF037637 CTD:10284 HOVERGEN:HBG003465
OrthoDB:EOG44MXTB GeneTree:ENSGT00390000003152 EMBL:AADN02005103
EMBL:AB052899 IPI:IPI00587707 RefSeq:NP_989643.1 UniGene:Gga.1083
SMR:Q90ZH5 STRING:Q90ZH5 Ensembl:ENSGALT00000027671 GeneID:374206
KEGG:gga:374206 InParanoid:Q90ZH5 NextBio:20813710 Uniprot:Q90ZH5
Length = 153
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 72/141 (51%), Positives = 100/141 (70%)
Query: 3 AIESFVTSID-----EKTVDREKTCPLLLRVFT-NFGKHNNVSDFHNG-FPPNQLQIYTW 55
A+ES VT + EK +DREKTCPLLLRVFT N G+H+ + +F G P ++LQIYTW
Sbjct: 2 AVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTW 61
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
MDATL+ELT+L++EV PEA+++GT F F ++ + + V++IG T+ G+KG DD+ T
Sbjct: 62 MDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMT 121
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
LQ +F IGDY+D+ I P R
Sbjct: 122 LQSQKFQIGDYLDIAITPPNR 142
>UNIPROTKB|G3X7E1 [details] [associations]
symbol:SAP18 "Histone deacetylase complex subunit SAP18"
species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005886
GO:GO:0005634 KO:K14324 OMA:DISITPP InterPro:IPR017250
InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637
RefSeq:NP_001030544.2 UniGene:Bt.48904 GeneID:615692
KEGG:bta:615692 CTD:10284 NextBio:20899743
GeneTree:ENSGT00390000003152 EMBL:DAAA02033233
Ensembl:ENSBTAT00000024791 Uniprot:G3X7E1
Length = 172
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 72/141 (51%), Positives = 100/141 (70%)
Query: 3 AIESFVTSID-----EKTVDREKTCPLLLRVFT-NFGKHNNVSDFHNG-FPPNQLQIYTW 55
A+ES VT + EK +DREKTCPLLLRVFT N G+H+ + +F G P ++LQIYTW
Sbjct: 21 AVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTW 80
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
MDATL+ELT+L++EV PEA+++GT F F ++ + + V++IG T+ G+KG DD+ T
Sbjct: 81 MDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMT 140
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
LQ +F IGDY+D+ I P R
Sbjct: 141 LQSQKFQIGDYLDIAITPPNR 161
>UNIPROTKB|Q3T022 [details] [associations]
symbol:SAP18 "Histone deacetylase complex subunit SAP18"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 eggNOG:NOG249491
HOGENOM:HOG000238745 KO:K14324 InterPro:IPR017250
InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637
EMBL:BC102603 IPI:IPI00688908 RefSeq:NP_001030544.2
UniGene:Bt.48904 ProteinModelPortal:Q3T022 SMR:Q3T022 STRING:Q3T022
PRIDE:Q3T022 GeneID:615692 KEGG:bta:615692 CTD:10284
HOVERGEN:HBG003465 InParanoid:Q3T022 OrthoDB:EOG44MXTB
NextBio:20899743 Uniprot:Q3T022
Length = 153
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 72/141 (51%), Positives = 100/141 (70%)
Query: 3 AIESFVTSID-----EKTVDREKTCPLLLRVFT-NFGKHNNVSDFHNG-FPPNQLQIYTW 55
A+ES VT + EK +DREKTCPLLLRVFT N G+H+ + +F G P ++LQIYTW
Sbjct: 2 AVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTW 61
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
MDATL+ELT+L++EV PEA+++GT F F ++ + + V++IG T+ G+KG DD+ T
Sbjct: 62 MDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMT 121
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
LQ +F IGDY+D+ I P R
Sbjct: 122 LQSQKFQIGDYLDIAITPPNR 142
>UNIPROTKB|I3LF36 [details] [associations]
symbol:SAP18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005886 GO:GO:0005634 KO:K14324
OMA:DISITPP InterPro:IPR017250 InterPro:IPR010516 PANTHER:PTHR13082
Pfam:PF06487 PIRSF:PIRSF037637 GeneTree:ENSGT00390000003152
EMBL:CU467900 RefSeq:XP_003357847.1 ProteinModelPortal:I3LF36
SMR:I3LF36 Ensembl:ENSSSCT00000028302 GeneID:100623258
KEGG:ssc:100623258 Uniprot:I3LF36
Length = 153
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 72/141 (51%), Positives = 100/141 (70%)
Query: 3 AIESFVTSID-----EKTVDREKTCPLLLRVFT-NFGKHNNVSDFHNG-FPPNQLQIYTW 55
A+ES VT + EK +DREKTCPLLLRVFT N G+H+ + +F G P ++LQIYTW
Sbjct: 2 AVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTW 61
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
MDATL+ELT+L++EV PEA+++GT F F ++ + + V++IG T+ G+KG DD+ T
Sbjct: 62 MDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMT 121
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
LQ +F IGDY+D+ I P R
Sbjct: 122 LQSQKFQIGDYLDIAITPPNR 142
>UNIPROTKB|O00422 [details] [associations]
symbol:SAP18 "Histone deacetylase complex subunit SAP18"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
EMBL:U96915 EMBL:AF153608 GO:GO:0005886 GO:GO:0005737 GO:GO:0003714
Pathway_Interaction_DB:telomerasepathway EMBL:CH471075
GO:GO:0006357 GO:GO:0006351 TCDB:3.A.18.1.1
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000118
EMBL:AL158032 eggNOG:NOG249491 HOGENOM:HOG000238745 KO:K14324
InterPro:IPR017250 InterPro:IPR010516 PANTHER:PTHR13082
Pfam:PF06487 PIRSF:PIRSF037637 CTD:10284 HOVERGEN:HBG003465
OrthoDB:EOG44MXTB EMBL:U78303 EMBL:AY550970 EMBL:CR457035
EMBL:AK311748 EMBL:BC030836 IPI:IPI00011698 RefSeq:NP_005861.2
UniGene:Hs.524899 PDB:2HDE PDBsum:2HDE ProteinModelPortal:O00422
SMR:O00422 DIP:DIP-33590N IntAct:O00422 MINT:MINT-5002140
STRING:O00422 PhosphoSite:O00422 PaxDb:O00422 PeptideAtlas:O00422
PRIDE:O00422 DNASU:10284 Ensembl:ENST00000382533 GeneID:10284
KEGG:hsa:10284 UCSC:uc001uns.3 GeneCards:GC13P021714
H-InvDB:HIX0011163 HGNC:HGNC:10530 HPA:CAB012273 HPA:HPA011352
MIM:602949 neXtProt:NX_O00422 PharmGKB:PA34940 InParanoid:O00422
PhylomeDB:O00422 ChiTaRS:SAP18 EvolutionaryTrace:O00422
GenomeRNAi:10284 NextBio:38964 Bgee:O00422 CleanEx:HS_SAP18
Genevestigator:O00422 GermOnline:ENSG00000150459 Uniprot:O00422
Length = 153
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 72/141 (51%), Positives = 100/141 (70%)
Query: 3 AIESFVTSID-----EKTVDREKTCPLLLRVFT-NFGKHNNVSDFHNG-FPPNQLQIYTW 55
A+ES VT + EK +DREKTCPLLLRVFT N G+H+ + +F G P ++LQIYTW
Sbjct: 2 AVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTW 61
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
MDATL+ELT+L++EV PEA+++GT F F ++ + + V++IG T+ G+KG DD+ T
Sbjct: 62 MDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMSGRKGTDDSMT 121
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
LQ +F IGDY+D+ I P R
Sbjct: 122 LQSQKFQIGDYLDIAITPPNR 142
>RGD|1310388 [details] [associations]
symbol:Sap18 "Sin3-associated polypeptide 18" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] RGD:1310388 eggNOG:NOG249491
HOGENOM:HOG000238745 KO:K14324 OMA:DISITPP InterPro:IPR017250
InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637
CTD:10284 HOVERGEN:HBG003465 OrthoDB:EOG44MXTB
GeneTree:ENSGT00390000003152 EMBL:BC104706 IPI:IPI00952210
RefSeq:NP_001028857.2 UniGene:Rn.74373 SMR:Q3MHS8 STRING:Q3MHS8
Ensembl:ENSRNOT00000028179 GeneID:290284 KEGG:rno:290284
UCSC:RGD:1310388 InParanoid:Q3MHS8 NextBio:630865
Genevestigator:Q3MHS8 Uniprot:Q3MHS8
Length = 153
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 72/141 (51%), Positives = 100/141 (70%)
Query: 3 AIESFVTSID-----EKTVDREKTCPLLLRVFT-NFGKHNNVSDFHNG-FPPNQLQIYTW 55
A+ES VT + EK +DREKTCPLLLRVFT N G+H+ + +F G P ++LQIYTW
Sbjct: 2 AVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTW 61
Query: 56 MDATLRELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKT 115
MDATL+ELT+L++EV PEA+++GT F F ++ + + V++IG T+ G+KG DD+ T
Sbjct: 62 MDATLKELTSLVKEVYPEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMSGRKGTDDSMT 121
Query: 116 LQQCRFIIGDYMDVKILTPKR 136
LQ +F IGDY+D+ I P R
Sbjct: 122 LQSQKFQIGDYLDIAITPPNR 142
>TAIR|locus:2043704 [details] [associations]
symbol:SAP18 "SIN3 associated polypeptide P18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IEP] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] GO:GO:0009737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006355 GO:GO:0009651 GO:GO:0006351
EMBL:AC003680 EMBL:AF378876 EMBL:AY050474 EMBL:AY088934
EMBL:AK227453 IPI:IPI00531442 PIR:T00877 RefSeq:NP_566050.1
UniGene:At.25070 ProteinModelPortal:O64644 SMR:O64644 IntAct:O64644
STRING:O64644 PaxDb:O64644 PRIDE:O64644 EnsemblPlants:AT2G45640.1
GeneID:819172 KEGG:ath:AT2G45640 TAIR:At2g45640 eggNOG:NOG249491
HOGENOM:HOG000238745 InParanoid:O64644 KO:K14324 OMA:DISITPP
PhylomeDB:O64644 ProtClustDB:CLSN2688947 Genevestigator:O64644
GermOnline:AT2G45640 InterPro:IPR017250 InterPro:IPR010516
PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637 Uniprot:O64644
Length = 152
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 57/120 (47%), Positives = 80/120 (66%)
Query: 16 VDREKTCPLLLRVFTNFGKHNNVSDF--HNGFPPNQLQIYTWMDATLRELTNLIREVNPE 73
VDREKTCPLLLRVFT G H+ D+ P +++QIYTW DA+LRELT+L++EV+
Sbjct: 33 VDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKDASLRELTDLVKEVSVA 92
Query: 74 AQQRGTCFYFTLLTPERGTSRFHVRDIGQTIC--GQKGPDDNKTLQQCRFIIGDYMDVKI 131
A++R F + P ++VR++G+T+ +K PDD+KTL + F IGDY+DV I
Sbjct: 93 ARRRNARLSFAFVYPNN-KGGYNVREVGETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151
>GENEDB_PFALCIPARUM|MAL7P1.37 [details] [associations]
symbol:MAL7P1.37 "sin3 associated polypeptide
p18-like protein" species:5833 "Plasmodium falciparum" [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] GO:GO:0003714 GO:GO:0006357 GO:GO:0000118
EMBL:AL844506 InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487
RefSeq:XP_001349027.1 ProteinModelPortal:Q8IBX6 IntAct:Q8IBX6
MINT:MINT-1654748 EnsemblProtists:MAL7P1.37:mRNA GeneID:2655210
KEGG:pfa:MAL7P1.37 EuPathDB:PlasmoDB:PF3D7_0711400 OMA:HHKHGHG
ProtClustDB:CLSZ2514865 Uniprot:Q8IBX6
Length = 728
Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/135 (33%), Positives = 73/135 (54%)
Query: 6 SFVTSIDE-KTVDREKTCPLLLRVFTNFGKHNNVSDFH---NGFPPNQLQIYTWMDATLR 61
S + ID+ ++REKTCP LLR+F K NV D N+LQIY W+D T+R
Sbjct: 597 SHMNGIDKIGIINREKTCPFLLRLFYKVDKEYNVDDMDILTKDNNSNELQIYAWIDITMR 656
Query: 62 ELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKTLQQCRF 121
E+ L+++ +++QR + F + + E+ F + + TI K +DNKTL +
Sbjct: 657 EIVTLVKDFYKDSRQRNAQWVFKVFSYEKKKLTF-LSKVHSTIYNYK--EDNKTLLSLNY 713
Query: 122 IIGDYMDVKILTPKR 136
IGD + + I+ ++
Sbjct: 714 EIGDIILLSIMLDRK 728
>UNIPROTKB|Q8IBX6 [details] [associations]
symbol:MAL7P1.37 "Sin3 associated polypeptide p18-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] GO:GO:0003714 GO:GO:0006357 GO:GO:0000118
EMBL:AL844506 InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487
RefSeq:XP_001349027.1 ProteinModelPortal:Q8IBX6 IntAct:Q8IBX6
MINT:MINT-1654748 EnsemblProtists:MAL7P1.37:mRNA GeneID:2655210
KEGG:pfa:MAL7P1.37 EuPathDB:PlasmoDB:PF3D7_0711400 OMA:HHKHGHG
ProtClustDB:CLSZ2514865 Uniprot:Q8IBX6
Length = 728
Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 45/135 (33%), Positives = 73/135 (54%)
Query: 6 SFVTSIDE-KTVDREKTCPLLLRVFTNFGKHNNVSDFH---NGFPPNQLQIYTWMDATLR 61
S + ID+ ++REKTCP LLR+F K NV D N+LQIY W+D T+R
Sbjct: 597 SHMNGIDKIGIINREKTCPFLLRLFYKVDKEYNVDDMDILTKDNNSNELQIYAWIDITMR 656
Query: 62 ELTNLIREVNPEAQQRGTCFYFTLLTPERGTSRFHVRDIGQTICGQKGPDDNKTLQQCRF 121
E+ L+++ +++QR + F + + E+ F + + TI K +DNKTL +
Sbjct: 657 EIVTLVKDFYKDSRQRNAQWVFKVFSYEKKKLTF-LSKVHSTIYNYK--EDNKTLLSLNY 713
Query: 122 IIGDYMDVKILTPKR 136
IGD + + I+ ++
Sbjct: 714 EIGDIILLSIMLDRK 728
>POMBASE|SPCC126.13c [details] [associations]
symbol:SPCC126.13c "histone deacetylase complex subunit,
SAP128 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=IC]
PomBase:SPCC126.13c GO:GO:0005829 EMBL:CU329672 GO:GO:0006351
GO:GO:0000790 GO:GO:0016575 GO:GO:0000118 KO:K14324
InterPro:IPR010516 Pfam:PF06487 PIR:T40917 RefSeq:NP_588456.1
ProteinModelPortal:O94405 EnsemblFungi:SPCC126.13c.1 GeneID:2539066
KEGG:spo:SPCC126.13c eggNOG:KOG3391 NextBio:20800239 Uniprot:O94405
Length = 145
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/120 (30%), Positives = 53/120 (44%)
Query: 22 CPLLLRVFTNFGKHNNVSDFHNGFPPNQLQIYTWMDATLRELTNLIREV----NPEAQQR 77
CP L+ V+ F N+V D P+ +Q+Y W+ TL EL LI + N E +
Sbjct: 23 CPFLISVYHQFQTKNHVLDIFEDVIPS-IQVYGWLTMTLYELGVLIADQLLLNNEETRHS 81
Query: 78 GTCFYFTLLTPERGTSRFHVRDIGQTIC--GQKGPDDNKTLQQCRFIIGDYMDVKILTPK 135
+ ++ R RD+G T+C K NK L++ GD +DV I K
Sbjct: 82 EWSLQIRTIFYDKYKDRPIARDLG-TVCLHNPKLFQGNKLLKRTGIKCGDKIDVTIKEDK 140
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 138 0.00091 102 3 11 22 0.40 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 578 (61 KB)
Total size of DFA: 143 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.60u 0.10s 13.70t Elapsed: 00:00:02
Total cpu time: 13.60u 0.10s 13.70t Elapsed: 00:00:02
Start: Thu Aug 15 12:06:09 2013 End: Thu Aug 15 12:06:11 2013