BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3143
(337 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328704199|ref|XP_001943651.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Acyrthosiphon pisum]
Length = 771
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/301 (71%), Positives = 252/301 (83%), Gaps = 12/301 (3%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E + EE D D+ L +DE+K D IK+RQKL+GK+ +K+ E +V E+ EE
Sbjct: 99 EHEDYKEESDCDS-----LSEDELKKDGIKDRQKLVGKRNKKKKEVEENKNEVTVEDEEE 153
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
EDAPP EEN+SF+QMN+SRPL+KAI ALNY++PTPIQAA IPVALLGRDICG
Sbjct: 154 FF------EDAPPFEENASFYQMNISRPLMKAISALNYVHPTPIQAAAIPVALLGRDICG 207
Query: 134 CAATGTGKTAAFMLPILERLLYKPRD-DQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLPILERLLY+P+ TRVLVLVPTRELGVQVYQVT+QLAQFTSVE
Sbjct: 208 CAATGTGKTAAYMLPILERLLYRPKGFTPITRVLVLVPTRELGVQVYQVTKQLAQFTSVE 267
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V LSVGGLE+KVQES+LRK PD+VIATPGRLLDHL NTPSFSL+D+EVLVLDEADRMLDE
Sbjct: 268 VGLSVGGLELKVQESILRKNPDVVIATPGRLLDHLQNTPSFSLADLEVLVLDEADRMLDE 327
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII +C+RTRQTMLFSATMTDAVNDL +VSL++PV++FVD+N +VA NLRQEF
Sbjct: 328 NFADQMKEIINMCARTRQTMLFSATMTDAVNDLATVSLSKPVKIFVDSNTDVAFNLRQEF 387
Query: 313 V 313
V
Sbjct: 388 V 388
>gi|157125871|ref|XP_001654429.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108873494|gb|EAT37719.1| AAEL010317-PA [Aedes aegypti]
Length = 804
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/334 (61%), Positives = 258/334 (77%), Gaps = 13/334 (3%)
Query: 9 NKEDKEDNEGSEEDDVDAEED-FALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVE 67
+KE+ E E +++ D ++ D L DDE+KHD ++ ++K K +++ + + K+ ++E
Sbjct: 106 SKENAEMLEEADDHDPNSYHDEVDLSDDELKHDVMRVKEK---KGRKREIPTDNKV-EIE 161
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
EE E ++FFE+A EE SSF+QMNLSRPL+KAIG L YIYPTPIQAATIP+ALL
Sbjct: 162 DEEDEP----QDFFEEAGGNEEISSFYQMNLSRPLMKAIGVLGYIYPTPIQAATIPIALL 217
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLA 186
GRDICGCAATGTGKTAA+MLP LERLLYKP Q TRVLVLVPTRELG QVYQV++QL
Sbjct: 218 GRDICGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVPTRELGAQVYQVSKQLT 277
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
QFTS+EV +++GGL+VK QE+VLR PD+VIATPGRL+DH+ NTPSFSL IEVL+LDEA
Sbjct: 278 QFTSIEVGIAIGGLDVKAQEAVLRTNPDVVIATPGRLIDHIKNTPSFSLDSIEVLILDEA 337
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRMLDE+FA QMKEII+ CS+TRQTMLFSATMTD V DL +VSLT+PV+VFV+NN VA
Sbjct: 338 DRMLDEYFAEQMKEIIQSCSKTRQTMLFSATMTDQVKDLAAVSLTKPVKVFVNNNQTVAF 397
Query: 307 NLRQEFVSFSNIDEVRLYNVLGLMLLR---ENCL 337
NLRQEF+ E +L ++ R ++C+
Sbjct: 398 NLRQEFIRIREGREADREPLLAALICRTFHDHCM 431
>gi|312375048|gb|EFR22493.1| hypothetical protein AND_15188 [Anopheles darlingi]
Length = 879
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/311 (62%), Positives = 237/311 (76%), Gaps = 6/311 (1%)
Query: 32 LPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEEN- 90
L DDE+KHD +K +++ K + V+ +E E+ G K++FE+A E+
Sbjct: 149 LSDDELKHDYMKVKERKGRKARAAAAENGQAEPTVKVQEDTED-GAKDYFEEAEGTNEHI 207
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SF+QM+LSRPL+KAIGAL YIYPTPIQA+TIP+ALLGRDICGCAATGTGKTAA+MLP L
Sbjct: 208 QSFYQMDLSRPLMKAIGALGYIYPTPIQASTIPIALLGRDICGCAATGTGKTAAYMLPTL 267
Query: 151 ERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
ERLLYKP Q TRVLVLVPTRELG QVYQV +QL QFT+VEV +++GGL+VK QE+VL
Sbjct: 268 ERLLYKPNAAQAVTRVLVLVPTRELGAQVYQVAKQLTQFTNVEVGIAIGGLDVKAQEAVL 327
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R PDIVIATPGRL+DH+ NTPSFSL IE+L+LDEADRMLDE+FA QMKEIIR CS TR
Sbjct: 328 RTNPDIVIATPGRLIDHIKNTPSFSLDSIEILILDEADRMLDEYFAEQMKEIIRSCSATR 387
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGL 329
QTMLFSATMT+ V DL +VSL +PV++FV+NN VA NLRQEF+ E +L
Sbjct: 388 QTMLFSATMTEEVKDLAAVSLKKPVKIFVNNNQTVAFNLRQEFIRVREGREADREPILAA 447
Query: 330 MLLR---ENCL 337
++ R ++C+
Sbjct: 448 LVCRTFHDHCM 458
>gi|170044624|ref|XP_001849941.1| ATP-dependent RNA helicase DRS1 [Culex quinquefasciatus]
gi|167867695|gb|EDS31078.1| ATP-dependent RNA helicase DRS1 [Culex quinquefasciatus]
Length = 807
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/330 (60%), Positives = 242/330 (73%), Gaps = 33/330 (10%)
Query: 22 DDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFF 81
D +AE D L DDE+KHD ++ ++K K +KR E EN+G E
Sbjct: 126 DSYNAEID--LSDDELKHDTMRTKEK----KGRKR-------------EVSENDGKVEIE 166
Query: 82 ED----------APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
++ A EE SSF+QMNLSRPL+KAIG L YIYPTPIQAATIP+AL+GRD+
Sbjct: 167 DEDEEQQDFFEEAGGNEEISSFYQMNLSRPLMKAIGFLGYIYPTPIQAATIPIALMGRDV 226
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTS 190
CGCAATGTGKTAA+MLP LERLLYKP Q TRVLVLVPTRELG QVYQVT+QL Q+TS
Sbjct: 227 CGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVPTRELGAQVYQVTKQLTQYTS 286
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
+EV +++GGL+VK QE+VLR PDIVIATPGRL+DH+ NTPSFSL IEVL+LDEADRML
Sbjct: 287 IEVGIAIGGLDVKAQEAVLRTNPDIVIATPGRLIDHIKNTPSFSLDSIEVLILDEADRML 346
Query: 251 DEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
DE+FA QMKEII+ CS++RQTMLFSATMTD V DL +VSL++PV+VFV+NN VA NLRQ
Sbjct: 347 DEYFAEQMKEIIQSCSKSRQTMLFSATMTDQVKDLAAVSLSKPVKVFVNNNQTVAFNLRQ 406
Query: 311 EFVSFSNIDEVRLYNVLGLMLLR---ENCL 337
EF+ + +L ++ R ++C+
Sbjct: 407 EFIRIRESRDADREPILAALICRTFHDHCM 436
>gi|158287566|ref|XP_309566.4| AGAP011084-PA [Anopheles gambiae str. PEST]
gi|157019713|gb|EAA05253.5| AGAP011084-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/320 (60%), Positives = 245/320 (76%), Gaps = 18/320 (5%)
Query: 28 EDFALPDDEMKHDNIKNRQKLIGKKKQKRLAK-EGKLKQVEAEEYEENEGGKEFFEDAPP 86
E+ L DDE+KHD ++ + ++K K+L + E VE +E E+ +++FE+
Sbjct: 113 EEVDLSDDELKHDYMR-----VKERKGKKLTEAENGGPTVEVKEDTEDGTKEDYFEE--- 164
Query: 87 VEENS-----SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
+EEN+ SF+QM+LSRPL+KAIGAL YIYPTPIQA+TIP+AL+GRDICGCAATGTGK
Sbjct: 165 IEENANGEIQSFYQMDLSRPLMKAIGALGYIYPTPIQASTIPIALMGRDICGCAATGTGK 224
Query: 142 TAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
TAA+MLP +ERLLYKP Q TRVLVLVPTRELG QVYQV +QL QFT+V+V +++GGL
Sbjct: 225 TAAYMLPTIERLLYKPNVAQAVTRVLVLVPTRELGAQVYQVAKQLTQFTNVDVGIAIGGL 284
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+VK QE+VLRK PD+VIATPGRL+DH+ NTPSFSL IE+L+LDEADRMLDE+FA QMKE
Sbjct: 285 DVKAQEAVLRKNPDVVIATPGRLIDHIKNTPSFSLDSIEILILDEADRMLDEYFAEQMKE 344
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
IIR CS TRQTMLFSATMT+ V DL +VSL +PV++FV+NN VA NLRQEF+ E
Sbjct: 345 IIRSCSATRQTMLFSATMTEEVKDLAAVSLKKPVKIFVNNNQTVAFNLRQEFIRIREGRE 404
Query: 321 VRLYNVLGLMLLR---ENCL 337
+L ++ R ++C+
Sbjct: 405 ADREAILAALVCRTFHDHCM 424
>gi|357617988|gb|EHJ71096.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 776
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/331 (60%), Positives = 253/331 (76%), Gaps = 18/331 (5%)
Query: 7 EGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQV 66
+GN +D E +EG ++ +D +F + DDE+K D IK + K + KK+ E +LK+
Sbjct: 92 KGNIDDSE-SEGEKDAGLD---EFEISDDELKKDEIKTKTKKLTKKQML----EEELKKD 143
Query: 67 EAE----EYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATI 122
E E EY+ + FFE+ PP +E ++F+ MNLSRP+LKAI +LNY++PTPIQAATI
Sbjct: 144 EGEGARIEYDSD-----FFEEPPPYDEQATFYMMNLSRPMLKAIASLNYVHPTPIQAATI 198
Query: 123 PVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVT 182
P+ALLG+DIC CAATGTGKTAA+M+P+LERLLYKP ++ TRVLVLVPTRELG QV+ VT
Sbjct: 199 PIALLGKDICACAATGTGKTAAYMVPVLERLLYKP-TERRTRVLVLVPTRELGAQVHTVT 257
Query: 183 RQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
RQLAQFTSV + LSVGGL+VK QESVLR+ PD+VIATPGRL+DH+ NTPSF L+ IEVL+
Sbjct: 258 RQLAQFTSVTIGLSVGGLDVKYQESVLRRHPDVVIATPGRLIDHVRNTPSFDLNSIEVLI 317
Query: 243 LDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
LDEADRMLDE+FA QMKEIIR CS RQTMLFSATM+D V DL +VSL +PV++F+D+N
Sbjct: 318 LDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMSDQVRDLAAVSLKKPVKLFLDSNK 377
Query: 303 EVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
+VA NLRQEFV E +L ++ R
Sbjct: 378 DVAFNLRQEFVRIRKERECDREAILAALVCR 408
>gi|307173483|gb|EFN64393.1| Probable ATP-dependent RNA helicase DDX27 [Camponotus floridanus]
Length = 694
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/332 (59%), Positives = 250/332 (75%), Gaps = 25/332 (7%)
Query: 2 DSSDEEGN-KEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKE 60
+SSDEE + + K+ +GS+ D D+ F DE D + K I +K + +L +
Sbjct: 11 ESSDEEDDFQPRKQRKKGSK--DFDSNFQFISSTDEYNQDPWNDLSKYIKRKPKTKL--D 66
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEEN------------------SSFHQMNLSRPL 102
K++++ +EY E +G ++ F+ P +N S+F+QMNLSRPL
Sbjct: 67 DKIRKIR-KEYNEQDGIEDDFKIEPNTNQNDDTISLSEDELKKDSQTYSTFYQMNLSRPL 125
Query: 103 LKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN 162
LKAI A+N+I PTPIQAATIPVAL+GRDICGCAATGTGKTAA+MLP LERLLY+P D
Sbjct: 126 LKAITAMNFIQPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPA 185
Query: 163 -TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
+RVLVLVPTRELGVQVYQVT+QL QFT+VEV LSVGGL+VKVQESVLRK PDIVIATPG
Sbjct: 186 VSRVLVLVPTRELGVQVYQVTKQLTQFTTVEVGLSVGGLDVKVQESVLRKNPDIVIATPG 245
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RL+DHL+N P+FSL++IEVL+LDEADRMLDE+FA QMK I++ C+RT+QT+LFSATMT+
Sbjct: 246 RLIDHLNNAPTFSLNNIEVLILDEADRMLDEYFAEQMKYIVKQCARTKQTILFSATMTEE 305
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
V DL +VSL P+++FVD+N +VA NLRQEF+
Sbjct: 306 VKDLAAVSLNNPIKIFVDSNQDVAFNLRQEFI 337
>gi|350416437|ref|XP_003490948.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Bombus
impatiens]
Length = 741
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/254 (70%), Positives = 216/254 (85%), Gaps = 1/254 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ +E +++F+QMNLSRPLLKAI A+N+++PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 148 FEEYSNIETHATFYQMNLSRPLLKAITAMNFVHPTPIQAATIPVALMGRDICGCAATGTG 207
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP LERLLY+P D + +RVLVLVPTRELGVQVYQVT+QL+QFT++EV LSVGG
Sbjct: 208 KTAAYMLPTLERLLYRPLDGPSISRVLVLVPTRELGVQVYQVTKQLSQFTTIEVGLSVGG 267
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VKVQE+VLRK PDIVIATPGRL+DHL NTPSFSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 268 LDVKVQEAVLRKNPDIVIATPGRLIDHLRNTPSFSLDSIEVLILDEADRMLDEYFAEQMK 327
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
I++ CSR+RQT+LFSATMT+ V DL +VSL +PV+VFVD+N +VA NLRQEF+
Sbjct: 328 YIVKQCSRSRQTILFSATMTEEVKDLAAVSLDKPVKVFVDSNQDVAFNLRQEFIRIRKER 387
Query: 320 EVRLYNVLGLMLLR 333
E +L ++ R
Sbjct: 388 EGDREAILAALICR 401
>gi|340717314|ref|XP_003397129.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Bombus
terrestris]
Length = 740
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/234 (75%), Positives = 210/234 (89%), Gaps = 1/234 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ +E +++F+QMNLSRPLLKAI A+N+++PTPIQAATIPVALLGRDICGCAATGTG
Sbjct: 147 FEEYTNIETHATFYQMNLSRPLLKAITAMNFVHPTPIQAATIPVALLGRDICGCAATGTG 206
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP LERLLY+P D + +RVLVLVPTRELGVQVYQVT+QL+QFT++EV LSVGG
Sbjct: 207 KTAAYMLPTLERLLYRPLDGPSISRVLVLVPTRELGVQVYQVTKQLSQFTTIEVGLSVGG 266
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VKVQE+VLRK PDIVIATPGRL+DHL NTPSFSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 267 LDVKVQEAVLRKNPDIVIATPGRLIDHLRNTPSFSLDSIEVLILDEADRMLDEYFAEQMK 326
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
I++ CSR+RQT+LFSATMT+ V DL +VSL +PV+VFVD+N +VA NLRQEF+
Sbjct: 327 YIVKQCSRSRQTILFSATMTEEVKDLAAVSLDKPVKVFVDSNQDVAFNLRQEFI 380
>gi|380015035|ref|XP_003691517.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Apis florea]
Length = 710
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/234 (73%), Positives = 208/234 (88%), Gaps = 1/234 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ +E +++FHQMNLSRPLLKAI A+N+++PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 146 FEEYSNIESHATFHQMNLSRPLLKAITAMNFVHPTPIQAATIPVALMGRDICGCAATGTG 205
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP LERLLY+P D +RVLVLVPTRELGVQVYQVT+QL+QFT++EV LSVGG
Sbjct: 206 KTAAYMLPTLERLLYRPLDGPAISRVLVLVPTRELGVQVYQVTKQLSQFTTIEVGLSVGG 265
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK QE+VLR+ PDIVIATPGRL+DHL NTP+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 266 LDVKAQEAVLRRSPDIVIATPGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMK 325
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
I++ CSR+RQT+LFSATMT+ V DL +VSL +PV+VF+D+N +VA NLRQEF+
Sbjct: 326 YIVKQCSRSRQTILFSATMTEEVKDLAAVSLNKPVKVFIDSNQDVAFNLRQEFI 379
>gi|328778605|ref|XP_001122266.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Apis
mellifera]
Length = 739
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 172/234 (73%), Positives = 208/234 (88%), Gaps = 1/234 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ +E +++FHQMNLSRPLLKAI A+N+++PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 146 FEEYSNIESHATFHQMNLSRPLLKAITAMNFVHPTPIQAATIPVALMGRDICGCAATGTG 205
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP LERLLY+P D +RVLVLVPTRELGVQVYQVT+QL+QFT++EV LSVGG
Sbjct: 206 KTAAYMLPTLERLLYRPLDGPAISRVLVLVPTRELGVQVYQVTKQLSQFTTIEVGLSVGG 265
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK QE+VLR+ PDIVIATPGRL+DHL NTP+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 266 LDVKAQEAVLRRNPDIVIATPGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMK 325
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
I++ CSR+RQT+LFSATMT+ V DL +VSL +PV+VF+D+N +VA NLRQEF+
Sbjct: 326 YIVKQCSRSRQTILFSATMTEEVKDLAAVSLNKPVKVFIDSNQDVAFNLRQEFI 379
>gi|195381768|ref|XP_002049617.1| GJ21693 [Drosophila virilis]
gi|194144414|gb|EDW60810.1| GJ21693 [Drosophila virilis]
Length = 784
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/318 (61%), Positives = 245/318 (77%), Gaps = 18/318 (5%)
Query: 27 EEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPP 86
+E+ AL DDE+KHDN++ R+K K K+K+ A++ ++ K F+D
Sbjct: 101 DEEIALSDDELKHDNLRLREKKQSKNKKKKSAEDDLDEEEGE---------KMQFDDT-- 149
Query: 87 VEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
VE N +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRDICGCAATGTGKTA
Sbjct: 150 VEANELITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTA 209
Query: 144 AFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
A+MLP +ERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++V L++GGL+V
Sbjct: 210 AYMLPTVERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSIDVGLAIGGLDV 269
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
K QE+VLR+ PDIVIATPGRL+DH+ NTPSFSL IEVL+LDEADRMLDE+FA QMKEII
Sbjct: 270 KAQETVLRQNPDIVIATPGRLIDHIKNTPSFSLDSIEVLILDEADRMLDEYFAEQMKEII 329
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLRQEF+ E
Sbjct: 330 NSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQEFIRIREDKEGD 389
Query: 323 LYNVLGLMLLR---ENCL 337
+L ++ R ++C+
Sbjct: 390 REPILASLICRTFHDHCM 407
>gi|195123476|ref|XP_002006232.1| GI18677 [Drosophila mojavensis]
gi|193911300|gb|EDW10167.1| GI18677 [Drosophila mojavensis]
Length = 787
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/319 (62%), Positives = 250/319 (78%), Gaps = 18/319 (5%)
Query: 26 AEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAP 85
++E+ AL +DE+KHDN++ R+K K K+K+ A V+AEE EE E K F+D
Sbjct: 100 SDEEIALSEDELKHDNLRLREKKQSKNKKKKSA-------VDAEEEEEGE--KMQFDDT- 149
Query: 86 PVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
VE N +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRDICGCAATGTGKT
Sbjct: 150 -VESNETITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKT 208
Query: 143 AAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
AA+MLP +ERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS+EV L++GGL+
Sbjct: 209 AAYMLPTVERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSIEVGLAIGGLD 268
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE+FA QMKEI
Sbjct: 269 VKAQETVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEI 328
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEV 321
I C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLRQEF+ E
Sbjct: 329 INSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQEFIRIREDKEG 388
Query: 322 RLYNVLGLMLLR---ENCL 337
+L ++ R ++C+
Sbjct: 389 DREPILASLICRTFHDHCM 407
>gi|345492254|ref|XP_001602245.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Nasonia
vitripennis]
Length = 787
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/253 (70%), Positives = 211/253 (83%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ + ++F+ MNLSRPLLKA+ ++N++ PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 144 FEECTNYDTLATFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTG 203
Query: 141 KTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
KTAA+MLP LERLLY+P D TRVLVLVPTRELGVQVYQVT+QL+QFTSVEV LSVGGL
Sbjct: 204 KTAAYMLPTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGL 263
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+VKVQESVLRK PDIVIATPGRL+DHL NTP+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 264 DVKVQESVLRKNPDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMKH 323
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
I+R C+RTRQT+LFSATMT+ V DL +VSL +PV+VFVD+N +VA NLRQEF+ E
Sbjct: 324 IVRQCARTRQTILFSATMTEEVKDLAAVSLDKPVKVFVDSNQDVAFNLRQEFIRIRKERE 383
Query: 321 VRLYNVLGLMLLR 333
+L ++ R
Sbjct: 384 GDREAILAALICR 396
>gi|383864023|ref|XP_003707479.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Megachile
rotundata]
Length = 741
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/234 (75%), Positives = 207/234 (88%), Gaps = 1/234 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ E +++F+QMNLSRPLLKAI +N+++PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 147 FEEYSNSETHATFYQMNLSRPLLKAITTMNFVHPTPIQAATIPVALMGRDICGCAATGTG 206
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP LERLLY+P D +RVLVLVPTRELGVQVYQVT+QL+QFT+VEV LSVGG
Sbjct: 207 KTAAYMLPTLERLLYRPLDGPAISRVLVLVPTRELGVQVYQVTKQLSQFTTVEVGLSVGG 266
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VKVQE+VLRK PDIVIATPGRL+DHL NTP+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 267 LDVKVQETVLRKNPDIVIATPGRLIDHLKNTPTFSLDSIEVLILDEADRMLDEYFAEQMK 326
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
I++ CSRTRQTMLFSATMT+ V DL +VSL +PV+VFVD+N +VA NLRQEF+
Sbjct: 327 YIVQQCSRTRQTMLFSATMTEEVKDLAAVSLDKPVKVFVDSNQDVAFNLRQEFI 380
>gi|322795050|gb|EFZ17898.1| hypothetical protein SINV_07122 [Solenopsis invicta]
Length = 725
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/254 (68%), Positives = 212/254 (83%), Gaps = 1/254 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ + ++F+QMNLSRPLLKAI A+N+++PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 149 FEEYTNSQTYATFYQMNLSRPLLKAITAMNFVHPTPIQAATIPVALMGRDICGCAATGTG 208
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP+LERLLY+P D +RVLVLVPTRELGVQVYQVT+QLAQFT+VEV LSVGG
Sbjct: 209 KTAAYMLPVLERLLYRPLDGPAISRVLVLVPTRELGVQVYQVTKQLAQFTTVEVGLSVGG 268
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK+QE VLRK PDIVIATPGRL+DHL N P+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 269 LDVKIQEGVLRKNPDIVIATPGRLIDHLRNAPTFSLDSIEVLILDEADRMLDEYFAEQMK 328
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
I++ CSRTRQT+LFSATMT+ V DL +VSL +P+++FVD+N +VA NLRQEF+
Sbjct: 329 YIVKQCSRTRQTILFSATMTEEVKDLAAVSLDKPIKIFVDSNQDVAFNLRQEFIRIRKER 388
Query: 320 EVRLYNVLGLMLLR 333
E +L ++ R
Sbjct: 389 EGDREAILAALVCR 402
>gi|195024659|ref|XP_001985916.1| GH21077 [Drosophila grimshawi]
gi|193901916|gb|EDW00783.1| GH21077 [Drosophila grimshawi]
Length = 790
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/293 (63%), Positives = 234/293 (79%), Gaps = 16/293 (5%)
Query: 25 DAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDA 84
D +++ AL DDE++HDN++ R+K KKK+K + + E ++++
Sbjct: 101 DDDDEIALSDDELQHDNLRLREKKQSKKKKKSADDDIDEDEGEKMQFDDT---------- 150
Query: 85 PPVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
VE N +SF+QMNLSRPL++AIG L YIYPTPIQA+TIP+ALLGRDICGCAATGTGK
Sbjct: 151 --VESNDLITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPIALLGRDICGCAATGTGK 208
Query: 142 TAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
TAA+MLP +ERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++V L++GGL
Sbjct: 209 TAAYMLPTVERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSIDVGLAIGGL 268
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSFSL IEVL+LDEADRMLDE+FA QMKE
Sbjct: 269 DVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFSLDSIEVLILDEADRMLDEYFAEQMKE 328
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
II C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLRQEF+
Sbjct: 329 IINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQEFI 381
>gi|198456267|ref|XP_001360280.2| GA15282 [Drosophila pseudoobscura pseudoobscura]
gi|198135552|gb|EAL24855.2| GA15282 [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/325 (59%), Positives = 249/325 (76%), Gaps = 19/325 (5%)
Query: 17 EGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEG 76
E S+ED++D L +DE++HDN++ R+K K K+K+ A+E + E ++++
Sbjct: 98 EQSDEDEID------LSEDELQHDNLRLREKKQTKSKKKKKAEEEDEDEGEKMQFDDTVE 151
Query: 77 GKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
G E + +SF+QMNLSRPL++AIG L YIYPTPIQA+TIP+ALLGRDICGCAA
Sbjct: 152 GNE---------QITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPIALLGRDICGCAA 202
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++V L
Sbjct: 203 TGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSIDVGL 262
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE+FA
Sbjct: 263 AIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFA 322
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
QMKEII C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLRQEF+
Sbjct: 323 EQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQEFIRI 382
Query: 316 SNIDEVRLYNVLGLMLLR---ENCL 337
E +L ++ R ++C+
Sbjct: 383 REDKEGDREPILASLICRTFHDHCM 407
>gi|195149497|ref|XP_002015694.1| GL11206 [Drosophila persimilis]
gi|194109541|gb|EDW31584.1| GL11206 [Drosophila persimilis]
Length = 785
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/325 (59%), Positives = 249/325 (76%), Gaps = 19/325 (5%)
Query: 17 EGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEG 76
E S+ED++D L +DE++HDN++ R+K K K+K+ A+E + E ++++
Sbjct: 98 EQSDEDEID------LSEDELQHDNLRLREKKQTKSKKKKKAEEEDEDEGEKMQFDDTVE 151
Query: 77 GKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
G E + +SF+QMNLSRPL++AIG L YIYPTPIQA+TIP+ALLGRDICGCAA
Sbjct: 152 GNE---------QITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPIALLGRDICGCAA 202
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++V L
Sbjct: 203 TGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSIDVGL 262
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE+FA
Sbjct: 263 AIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFA 322
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
QMKEII C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLRQEF+
Sbjct: 323 EQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQEFIRI 382
Query: 316 SNIDEVRLYNVLGLMLLR---ENCL 337
E +L ++ R ++C+
Sbjct: 383 REDKEGDREPILASLICRTFHDHCM 407
>gi|307214987|gb|EFN89832.1| Probable ATP-dependent RNA helicase DDX27 [Harpegnathos saltator]
Length = 734
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/254 (69%), Positives = 210/254 (82%), Gaps = 1/254 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ E +++F+QMNLSRPLLKAI +N++ PTPIQAATIPVAL+GRDICGCAATGTG
Sbjct: 145 FEECTNFETDATFYQMNLSRPLLKAITTMNFLTPTPIQAATIPVALMGRDICGCAATGTG 204
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLP LERL+YKP D TRVLVLVPTRELGVQVYQVT+QL+QFTSVE LSVGG
Sbjct: 205 KTAAYMLPTLERLMYKPLDGPAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVETGLSVGG 264
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VKVQES+LR+ PDIVIATPGRL+DHL NTP+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 265 LDVKVQESILRRNPDIVIATPGRLIDHLRNTPTFSLDIIEVLILDEADRMLDEYFAEQMK 324
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
I+ CSR+RQTMLFSATMT+ V DL +VSL +P+++FVD+N +VA NLRQEF+
Sbjct: 325 YIVNQCSRSRQTMLFSATMTEEVKDLAAVSLDKPIKIFVDSNQDVAFNLRQEFIRIRKER 384
Query: 320 EVRLYNVLGLMLLR 333
E +L ++ R
Sbjct: 385 EGDREAILAALICR 398
>gi|194757571|ref|XP_001961038.1| GF13667 [Drosophila ananassae]
gi|190622336|gb|EDV37860.1| GF13667 [Drosophila ananassae]
Length = 782
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/331 (58%), Positives = 251/331 (75%), Gaps = 28/331 (8%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K + K K+K+ A+E + + E ++++
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKKLSKNKKKKAAEEDEEDEGEKMQFDD 148
Query: 74 NEGGKEFFEDAPPVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
+ +E N +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRD
Sbjct: 149 S------------IEANDQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRD 196
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFT 189
ICGCAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFT
Sbjct: 197 ICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFT 256
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
S++V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRM
Sbjct: 257 SIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRM 316
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
LDE+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLR
Sbjct: 317 LDEYFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLR 376
Query: 310 QEFVSFSNIDEVRLYNVLGLMLLR---ENCL 337
QEF+ E +L ++ R ++C+
Sbjct: 377 QEFIRIREDKEGDREPILASLICRTFHDHCM 407
>gi|189238701|ref|XP_968537.2| PREDICTED: similar to Rs1 CG2173-PA [Tribolium castaneum]
Length = 1657
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/316 (58%), Positives = 229/316 (72%), Gaps = 27/316 (8%)
Query: 26 AEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAP 85
A+ D +L D E+KHD I+ E E ++ + FFE
Sbjct: 1061 ADSDVSLSDSELKHDKIR-----------------------EKETRKKAAPNENFFETVD 1097
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
E++SF+QMNLSRPLLKAI + +++PTPIQA+TIPVAL+GRDICGCAATGTGKTAA+
Sbjct: 1098 LDTEHASFYQMNLSRPLLKAISDMKFVHPTPIQASTIPVALMGRDICGCAATGTGKTAAY 1157
Query: 146 MLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
MLP LERLLY+P TRVLVLVPTRELGVQVYQVT+QLAQF+ +++ L+VGGL++K
Sbjct: 1158 MLPTLERLLYRPVGGPPVTRVLVLVPTRELGVQVYQVTKQLAQFSDIQIGLAVGGLDLKA 1217
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
QE++LRK PDIVIATPGRL+DHL +TP+F L IEVL+LDEADRMLDE+FA QMKEII+
Sbjct: 1218 QETILRKNPDIVIATPGRLIDHLKSTPTFGLDSIEVLILDEADRMLDEYFAEQMKEIIKQ 1277
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
C+RTRQTMLFSATMT+ V L +VSL +PVR+FVD+N EVA LRQEFV E
Sbjct: 1278 CARTRQTMLFSATMTEEVESLAAVSLNKPVRLFVDSNREVAFGLRQEFVRIRQDKEGDRE 1337
Query: 325 NVLGLML---LRENCL 337
+L ++ RE+C+
Sbjct: 1338 AILAALVCRTFREHCM 1353
>gi|270010045|gb|EFA06493.1| hypothetical protein TcasGA2_TC009390 [Tribolium castaneum]
Length = 691
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/316 (58%), Positives = 229/316 (72%), Gaps = 27/316 (8%)
Query: 26 AEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAP 85
A+ D +L D E+KHD I+ E E ++ + FFE
Sbjct: 95 ADSDVSLSDSELKHDKIR-----------------------EKETRKKAAPNENFFETVD 131
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
E++SF+QMNLSRPLLKAI + +++PTPIQA+TIPVAL+GRDICGCAATGTGKTAA+
Sbjct: 132 LDTEHASFYQMNLSRPLLKAISDMKFVHPTPIQASTIPVALMGRDICGCAATGTGKTAAY 191
Query: 146 MLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
MLP LERLLY+P TRVLVLVPTRELGVQVYQVT+QLAQF+ +++ L+VGGL++K
Sbjct: 192 MLPTLERLLYRPVGGPPVTRVLVLVPTRELGVQVYQVTKQLAQFSDIQIGLAVGGLDLKA 251
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
QE++LRK PDIVIATPGRL+DHL +TP+F L IEVL+LDEADRMLDE+FA QMKEII+
Sbjct: 252 QETILRKNPDIVIATPGRLIDHLKSTPTFGLDSIEVLILDEADRMLDEYFAEQMKEIIKQ 311
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
C+RTRQTMLFSATMT+ V L +VSL +PVR+FVD+N EVA LRQEFV E
Sbjct: 312 CARTRQTMLFSATMTEEVESLAAVSLNKPVRLFVDSNREVAFGLRQEFVRIRQDKEGDRE 371
Query: 325 NVLGLML---LRENCL 337
+L ++ RE+C+
Sbjct: 372 AILAALVCRTFREHCM 387
>gi|195431333|ref|XP_002063697.1| GK15774 [Drosophila willistoni]
gi|194159782|gb|EDW74683.1| GK15774 [Drosophila willistoni]
Length = 792
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 247/324 (76%), Gaps = 18/324 (5%)
Query: 19 SEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGK 78
S++D++D L +DE++HDN++ R+K + KKK+K+ + + + E K
Sbjct: 99 SDDDEID------LSEDELQHDNLRLREKKVSKKKKKQQQDDDEQADEDEGE-------K 145
Query: 79 EFFEDAPPVEEN-SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
F+D E +SF+QMNLSRPL++AIG L YIYPTPIQA+TIP+ALLGRDICGCAAT
Sbjct: 146 MQFDDTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPIALLGRDICGCAAT 205
Query: 138 GTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
GTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++V L+
Sbjct: 206 GTGKTAAYMLPTLERLLYRPLNNKTITRVLVLVPTRELGAQVYQVTKQLCQFTSIDVGLA 265
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
+GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSFSL IEVL+LDEADRMLDE+FA
Sbjct: 266 IGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFSLDSIEVLILDEADRMLDEYFAE 325
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
QMKEII C +TRQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEF+
Sbjct: 326 QMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIR 385
Query: 317 NIDEVRLYNVLGLMLLR---ENCL 337
E +L ++ R ++C+
Sbjct: 386 EDKEGDREPILASLICRTFHDHCM 409
>gi|195474630|ref|XP_002089594.1| GE19181 [Drosophila yakuba]
gi|194175695|gb|EDW89306.1| GE19181 [Drosophila yakuba]
Length = 782
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 248/328 (75%), Gaps = 22/328 (6%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K KKK+K+ +E + + E ++++
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFDD 148
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
E+ +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRDICG
Sbjct: 149 T---------VEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICG 199
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++
Sbjct: 200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSID 259
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE
Sbjct: 260 VGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDE 319
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEF
Sbjct: 320 YFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 379
Query: 313 VSFSNIDEVRLYNVLGLMLLR---ENCL 337
+ E +L ++ R ++C+
Sbjct: 380 IRIREDKEGDREPILASLICRTFHDHCM 407
>gi|194863559|ref|XP_001970500.1| GG23340 [Drosophila erecta]
gi|190662367|gb|EDV59559.1| GG23340 [Drosophila erecta]
Length = 782
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 248/328 (75%), Gaps = 22/328 (6%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K KKK+K+ +E + + E ++++
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFDD 148
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
E+ +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRDICG
Sbjct: 149 T---------VEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICG 199
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++
Sbjct: 200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSID 259
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L +EVL+LDEADRMLDE
Sbjct: 260 VGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSVEVLILDEADRMLDE 319
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +PV+VFV+NN +VA NLRQEF
Sbjct: 320 YFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPVKVFVNNNQQVAFNLRQEF 379
Query: 313 VSFSNIDEVRLYNVLGLMLLR---ENCL 337
+ E +L ++ R ++C+
Sbjct: 380 IRIREDKEGDREPILASLICRTFHDHCM 407
>gi|21356161|ref|NP_651970.1| Rs1 [Drosophila melanogaster]
gi|7304081|gb|AAF59119.1| Rs1 [Drosophila melanogaster]
gi|28626484|gb|AAO49161.1| LD15481p [Drosophila melanogaster]
Length = 782
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 244/328 (74%), Gaps = 22/328 (6%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K + K K+ E+ E+
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKK---------ESKKKKKKAGEEDEED 139
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+F + E+ +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRDICG
Sbjct: 140 EGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICG 199
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFT+++
Sbjct: 200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTID 259
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE
Sbjct: 260 VGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDE 319
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEF
Sbjct: 320 YFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 379
Query: 313 VSFSNIDEVRLYNVLGLMLLR---ENCL 337
+ E +L ++ R ++C+
Sbjct: 380 IRIREDKEGDREPILASLICRTFHDHCM 407
>gi|195332387|ref|XP_002032880.1| GM21012 [Drosophila sechellia]
gi|194124850|gb|EDW46893.1| GM21012 [Drosophila sechellia]
Length = 782
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 243/328 (74%), Gaps = 22/328 (6%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K + K K+ E+ E+
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKK---------ESKKKKKKAGEEDEED 139
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+F + E+ +SF+QMNLSRPL++AIG L Y YPTPIQA+TIPVALLGRDICG
Sbjct: 140 EGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYTYPTPIQASTIPVALLGRDICG 199
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++
Sbjct: 200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSID 259
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE
Sbjct: 260 VGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDE 319
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEF
Sbjct: 320 YFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 379
Query: 313 VSFSNIDEVRLYNVLGLMLLR---ENCL 337
+ E +L ++ R ++C+
Sbjct: 380 IRIREDKEGDREPILASLICRTFHDHCM 407
>gi|332021296|gb|EGI61675.1| Putative ATP-dependent RNA helicase DDX27 [Acromyrmex echinatior]
Length = 740
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 171/254 (67%), Positives = 209/254 (82%), Gaps = 1/254 (0%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
FE+ + ++F+QMNLSRPLLKAI +N++ PTPIQAATIP AL+GRDICGCAATGTG
Sbjct: 141 FEEYTDSQTYTTFYQMNLSRPLLKAITTMNFVQPTPIQAATIPAALMGRDICGCAATGTG 200
Query: 141 KTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
KTAA+MLPILERLLY+P D + +RVLVLVPTRELGVQVYQV +QLAQFT++E+ LSVGG
Sbjct: 201 KTAAYMLPILERLLYRPLDGPSISRVLVLVPTRELGVQVYQVAKQLAQFTTIEIGLSVGG 260
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK+QE VLRK PDIVIATPGRL+DHL N P+FSL IEVL+LDEADRMLDE+FA QMK
Sbjct: 261 LDVKIQEGVLRKNPDIVIATPGRLIDHLRNAPTFSLDSIEVLILDEADRMLDEYFAEQMK 320
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
I++ CSRTRQT+LFSATMT+ V DL +VSL +P+++FVD+N +VA NLRQEF+
Sbjct: 321 YIVKQCSRTRQTILFSATMTEEVEDLAAVSLDKPIKIFVDSNQDVAFNLRQEFIRIRKER 380
Query: 320 EVRLYNVLGLMLLR 333
E +L ++ R
Sbjct: 381 EGDREAILAALVCR 394
>gi|195581486|ref|XP_002080565.1| GD10546 [Drosophila simulans]
gi|194192574|gb|EDX06150.1| GD10546 [Drosophila simulans]
Length = 782
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 243/328 (74%), Gaps = 22/328 (6%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K + K K+ E+ E+
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKK---------ESKKKKKKAGEEDEED 139
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+F + E+ +SF+QMNLSRPL++AIG L Y YPTPIQA+TIPVALLGRDICG
Sbjct: 140 EGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYTYPTPIQASTIPVALLGRDICG 199
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFTS++
Sbjct: 200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTSID 259
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE
Sbjct: 260 VGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDE 319
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEF
Sbjct: 320 YFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 379
Query: 313 VSFSNIDEVRLYNVLGLMLLR---ENCL 337
+ E +L ++ R ++C+
Sbjct: 380 IRIREDKEGDREPILASLICRTFHDHCM 407
>gi|5901872|gb|AAD55444.1|AF181659_1 BcDNA.GM05306 [Drosophila melanogaster]
Length = 641
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 188/301 (62%), Positives = 237/301 (78%), Gaps = 19/301 (6%)
Query: 14 EDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEE 73
E ++GSE D L +DE+KHDN++ R+K KKK+K+ +E + + E
Sbjct: 98 EQSDGSEID---------LSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEK----- 143
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+F + E+ +SF+QMNLSRPL++AIG L YIYPTPIQA+TIPVALLGRDICG
Sbjct: 144 ----MQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICG 199
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAA+MLP LERLLY+P +++ TRVLVLVPTRELG QVYQVT+QL QFT+++
Sbjct: 200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTID 259
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
V L++GGL+VK QE+VLR+ PDIVIATPGRL+DH+ NTPSF+L IEVL+LDEADRMLDE
Sbjct: 260 VGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDE 319
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+FA QMKEII C +TRQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEF
Sbjct: 320 YFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEF 379
Query: 313 V 313
+
Sbjct: 380 I 380
>gi|321473370|gb|EFX84337.1| hypothetical protein DAPPUDRAFT_209410 [Daphnia pulex]
Length = 592
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 165/237 (69%), Positives = 206/237 (86%)
Query: 77 GKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
G++FF+++ E SFH+MNLSRPL+KAI ++N+++PTPIQ+ATIPVALLGRD+CGCAA
Sbjct: 2 GEDFFDESLLYEPAESFHEMNLSRPLMKAIASMNFVHPTPIQSATIPVALLGRDVCGCAA 61
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
TGTGKTAAFMLP+LERL+Y+P+ TRVLVLVPTRELGVQVYQV++QL+QFT++++ LS
Sbjct: 62 TGTGKTAAFMLPVLERLMYRPKVSATTRVLVLVPTRELGVQVYQVSKQLSQFTNIQIGLS 121
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
+GGL++KVQE VLR PD+VIATPGRL+DHL NTPSFSL I+VL+LDEADRMLDE F
Sbjct: 122 IGGLDLKVQEKVLRGNPDVVIATPGRLIDHLRNTPSFSLEAIDVLILDEADRMLDEFFIE 181
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
Q+KEII C R RQTMLFSATM++ V DL +VSL +P++VFV+NN +VA NLRQEFV
Sbjct: 182 QVKEIIMQCGRKRQTMLFSATMSNEVRDLAAVSLNKPIKVFVNNNRDVAFNLRQEFV 238
>gi|427792819|gb|JAA61861.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 696
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/263 (67%), Positives = 215/263 (81%), Gaps = 9/263 (3%)
Query: 51 KKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALN 110
+ KQK + EG VE EE E + + FF D EN+SF QMNLSRPLLKA+ A+N
Sbjct: 94 RAKQKAITVEG----VENEEDEAEDVTQAFFGD-----ENTSFQQMNLSRPLLKALTAMN 144
Query: 111 YIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVP 170
++YPTPIQ++TIP+ALLGRDI CAATGTGKTAAFMLP+LERLL++P+ D TRVLV+VP
Sbjct: 145 FVYPTPIQSSTIPMALLGRDIYACAATGTGKTAAFMLPVLERLLFRPKQDVVTRVLVIVP 204
Query: 171 TRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNT 230
TREL VQVYQV+ QLAQFT++ + LS GGL++K QE+ LRK PDI+IATPGRL+DHL NT
Sbjct: 205 TRELAVQVYQVSLQLAQFTNIMITLSAGGLDLKAQEAALRKLPDIIIATPGRLIDHLENT 264
Query: 231 PSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSL 290
P F L +IEVL+LDEAD+MLDE FASQMKEIIR C+ TRQTMLFSATMT+ V DL +VSL
Sbjct: 265 PGFDLRNIEVLILDEADKMLDETFASQMKEIIRQCAPTRQTMLFSATMTEEVKDLAAVSL 324
Query: 291 TRPVRVFVDNNHEVALNLRQEFV 313
+PV++F++NN +VALNLRQEFV
Sbjct: 325 QKPVKLFLNNNTDVALNLRQEFV 347
>gi|57529371|ref|NP_001006293.1| probable ATP-dependent RNA helicase DDX27 [Gallus gallus]
gi|53130268|emb|CAG31463.1| hypothetical protein RCJMB04_6k21 [Gallus gallus]
Length = 758
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/317 (59%), Positives = 233/317 (73%), Gaps = 24/317 (7%)
Query: 1 DDSSDEEGNKEDKEDNE--GSEEDDVDAEEDFALPDDEM--KHDNIKNRQKLIGKKKQKR 56
D +++ E N+ +K + E G EE++ D E ++L D+ + K D +K K+++
Sbjct: 106 DGNAETEDNQSEKRECEDFGREEEE-DNESQYSLDDETIFTKADTLKV--------KERK 156
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTP 116
+K+G K+ E+ FFEDA ++N SF MNLSRPLLKAI AL + PTP
Sbjct: 157 RSKKGGQKEAES-----------FFEDASEYDDNLSFQDMNLSRPLLKAITALGFKQPTP 205
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
IQ A IPV LLG+DIC CAATGTGKTAAF+LP+LERL+YKPR TRVLVLVPTRELG+
Sbjct: 206 IQKACIPVGLLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGI 265
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
QV+ VT+QLAQF+SV L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS
Sbjct: 266 QVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFHLS 325
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+EVL+LDEADRMLDE+F QMKEIIRLCSR RQTMLFSATMT+ V DL SVSL P R+
Sbjct: 326 SVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTEEVKDLASVSLKNPTRI 385
Query: 297 FVDNNHEVALNLRQEFV 313
FV++N +VA LRQEF+
Sbjct: 386 FVNSNTDVAPFLRQEFI 402
>gi|326932134|ref|XP_003212175.1| PREDICTED: hypothetical protein LOC100549747 [Meleagris gallopavo]
Length = 1561
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/314 (58%), Positives = 228/314 (72%), Gaps = 21/314 (6%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEM--KHDNIKNRQKLIGKKKQKRLAK 59
D+ E+ E +E + E++ D E ++L D+ + K D IK K+++ +K
Sbjct: 911 DAGTEDNQSEKRECEDFGREEEEDNESQYSLDDETIFTKADTIK--------VKERKRSK 962
Query: 60 EGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
+G K+ E+ FFEDA +++ SF MNLSRPLLKAI AL + PTPIQ
Sbjct: 963 KGGQKEAES-----------FFEDASQYDDSLSFQDMNLSRPLLKAITALGFKQPTPIQK 1011
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
A IPV LLG+DIC CAATGTGKTAAF+LP+LERL+YKPR TRVLVLVPTRELG+QV+
Sbjct: 1012 ACIPVGLLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVH 1071
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
VT+QLAQF+SV L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS +E
Sbjct: 1072 SVTKQLAQFSSVTSCLAVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVE 1131
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
VL+LDEADRMLDE+F QMKEIIRLCS+ RQTMLFSATMT+ V DL SVSL P R+FV+
Sbjct: 1132 VLILDEADRMLDEYFEEQMKEIIRLCSKHRQTMLFSATMTEEVKDLASVSLKNPTRIFVN 1191
Query: 300 NNHEVALNLRQEFV 313
+N +VA LRQEF+
Sbjct: 1192 SNTDVAPFLRQEFI 1205
>gi|50838814|ref|NP_001002869.1| probable ATP-dependent RNA helicase DDX27 [Danio rerio]
gi|49618925|gb|AAT68047.1| DEAD box polypeptide 27 [Danio rerio]
Length = 776
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 164/234 (70%), Positives = 196/234 (83%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFEDA +EN +FH MNLSRPLLKAI + + PTPIQ A +PV LLG+DIC CAATGT
Sbjct: 190 FFEDASQYDENLTFHDMNLSRPLLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGT 249
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAFMLP+LERL+YKPR+ Q TRVLVLVPTRELG+QV+ V RQLAQFT++ L+VGG
Sbjct: 250 GKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGG 309
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L++K QE+ LR PD++IATPGRL+DHLHNTPSF LS IE+L+LDEADRMLDE+F QMK
Sbjct: 310 LDLKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMK 369
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EIIR+C+ RQTMLFSATM++ V DL SVSL +PVR+FV++N +VA LRQEFV
Sbjct: 370 EIIRMCAYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFV 423
>gi|291239420|ref|XP_002739621.1| PREDICTED: Rs1-like [Saccoglossus kowalevskii]
Length = 563
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 195/218 (89%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLKAI A+N+++PTPIQ ATIPVALLG+DIC CAATGTGKTAAFMLP+LERLLY
Sbjct: 1 MNLSRPLLKAINAMNFVHPTPIQVATIPVALLGKDICACAATGTGKTAAFMLPVLERLLY 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KP+ TRVLVLVPTRELG+QV+ VTRQLAQFT ++ L+VGGL+VK+QE+VLR+ PDI
Sbjct: 61 KPKQAAVTRVLVLVPTRELGIQVHSVTRQLAQFTEIDSCLAVGGLDVKLQEAVLRQGPDI 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
VIATPGRL+DHLHN PSFSLS+IE+L+LDEADRMLDE+F QMKEIIR+CS TRQTMLFS
Sbjct: 121 VIATPGRLIDHLHNAPSFSLSNIEILILDEADRMLDEYFEEQMKEIIRMCSITRQTMLFS 180
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
ATMTD V DLV+VSL PVR+F++ N +VA NLRQEF+
Sbjct: 181 ATMTDEVKDLVAVSLKNPVRLFINENTDVAYNLRQEFI 218
>gi|242007312|ref|XP_002424485.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212507903|gb|EEB11747.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 669
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 209/262 (79%), Gaps = 4/262 (1%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F E+ + +SF+QMNLSRPL+KAI A+N+ +PTPIQ A IPVALLGRDICGCAATGT
Sbjct: 144 FSEEISENHDITSFYQMNLSRPLMKAIAAMNFSHPTPIQCAAIPVALLGRDICGCAATGT 203
Query: 140 GKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
GKTAA+MLPILERLLYKP+ + TRVLVLVPTRELGVQV QV +QL++FT++E+ L+VG
Sbjct: 204 GKTAAYMLPILERLLYKPQGSLSITRVLVLVPTRELGVQVIQVAKQLSKFTTIEIGLAVG 263
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
GL+VKVQE+ LRK PDIVIATPGRL+DHL N+ FSL IE+LVLDEADRMLDE+FA QM
Sbjct: 264 GLDVKVQEAFLRKQPDIVIATPGRLIDHLKNSLGFSLDSIEILVLDEADRMLDEYFAEQM 323
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
KEI+R CSRTRQTMLFSATMT AV DL SVSL+ PV++FVD+N V NLRQEF+
Sbjct: 324 KEIVRQCSRTRQTMLFSATMTTAVEDLASVSLSNPVKIFVDSNQSVTNNLRQEFIRIRKG 383
Query: 319 DEVRLYNVLGLML---LRENCL 337
E VL ++ R NC+
Sbjct: 384 REGDKEAVLAALVRRTFRANCI 405
>gi|73992237|ref|XP_534451.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Canis lupus familiaris]
Length = 765
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/315 (60%), Positives = 227/315 (72%), Gaps = 9/315 (2%)
Query: 1 DDSSDEEGNKEDKEDNEGSE-EDDVDAE-EDFALPDDEMKHDNIKNRQKLIGKKKQKRLA 58
+D + G E+KE EGSE E+ D E +D P+DE + + + I L
Sbjct: 100 EDKEAKSGKSEEKEAKEGSELEEQEDHEGKDEEGPEDEDSETDYSSADENI-------LT 152
Query: 59 KEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQ 118
K LK E ++ ++ + FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ
Sbjct: 153 KADTLKVKERKKKKKGQETGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQ 212
Query: 119 AATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQV 178
A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV
Sbjct: 213 KACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQSPVTRVLVLVPTRELGIQV 272
Query: 179 YQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDI 238
+ VT+QLAQF ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS I
Sbjct: 273 HSVTKQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSI 332
Query: 239 EVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
EVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV
Sbjct: 333 EVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFV 392
Query: 299 DNNHEVALNLRQEFV 313
++N +VA LRQEFV
Sbjct: 393 NSNTDVAPFLRQEFV 407
>gi|194224511|ref|XP_001501169.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Equus
caballus]
Length = 724
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/317 (59%), Positives = 228/317 (71%), Gaps = 19/317 (5%)
Query: 3 SSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHD------NIKNRQKLIGKKKQKR 56
S E KE KE +E E++D++ E++ DD+ + D NI + + K+QK+
Sbjct: 155 SGKSEMEKEAKEGSEPEEQEDLEGEDEAGSEDDDSETDYSSADENILTKADTLKVKEQKK 214
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTP 116
K+G + GG FFEDA +E+ SF MNLSRPLLKAI A+ + PTP
Sbjct: 215 KKKKG-----------QEAGG--FFEDASQYDESLSFQDMNLSRPLLKAITAMGFKQPTP 261
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
IQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+
Sbjct: 262 IQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGI 321
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
QV+ VT+QLAQF S+ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS
Sbjct: 322 QVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLS 381
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+
Sbjct: 382 SIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRI 441
Query: 297 FVDNNHEVALNLRQEFV 313
FV++N +VA LRQEF+
Sbjct: 442 FVNSNTDVAPFLRQEFI 458
>gi|124249330|ref|NP_694705.2| probable ATP-dependent RNA helicase DDX27 [Mus musculus]
gi|341940504|sp|Q921N6.3|DDX27_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|74140985|dbj|BAE22077.1| unnamed protein product [Mus musculus]
gi|74210620|dbj|BAE23664.1| unnamed protein product [Mus musculus]
gi|148674548|gb|EDL06495.1| mCG14602, isoform CRA_c [Mus musculus]
Length = 760
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 229/330 (69%), Gaps = 21/330 (6%)
Query: 4 SDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKL 63
SD +G + ED GS+ D D+E D++ D+E+ L K L
Sbjct: 118 SDLKGQENPGEDEAGSK--DEDSETDYSSEDEEI-------------------LTKADTL 156
Query: 64 KQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIP 123
K E ++ ++ + FFEDA +++ SF MNLSRPLLKAI A+ + PTPIQ A IP
Sbjct: 157 KVKEKKKKKKGQAAGGFFEDASEYDKSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIP 216
Query: 124 VALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTR 183
V LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+
Sbjct: 217 VGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTK 276
Query: 184 QLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVL 243
QLAQF S+ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+L
Sbjct: 277 QLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLIL 336
Query: 244 DEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
DEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +
Sbjct: 337 DEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTD 396
Query: 304 VALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
VA LRQEF+ E ++ +L+R
Sbjct: 397 VAPFLRQEFIRIRPNREGDREAIVAALLMR 426
>gi|432110218|gb|ELK33991.1| Putative ATP-dependent RNA helicase DDX27 [Myotis davidii]
Length = 863
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 187/306 (61%), Positives = 226/306 (73%), Gaps = 21/306 (6%)
Query: 11 EDKEDNEGSEED---DVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVE 67
E++ED EG +E+ D D+E D++ D+ NI + + K++K+ K+G
Sbjct: 122 EEQEDPEGQDEEGSADEDSETDYSSSDE-----NILTKADTLKVKERKKKKKKG------ 170
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
+ GG FFEDA +EN SF MNLSRPLLKAI A+N+ PTPIQ A IPV LL
Sbjct: 171 -----QEAGG--FFEDASQYDENLSFQDMNLSRPLLKAITAMNFKQPTPIQKACIPVGLL 223
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQ
Sbjct: 224 GKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQ 283
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
F ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 284 FCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEAD 343
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA
Sbjct: 344 RMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF 403
Query: 308 LRQEFV 313
LRQEF+
Sbjct: 404 LRQEFI 409
>gi|109091647|ref|XP_001099400.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Macaca
mulatta]
gi|355563050|gb|EHH19612.1| Putative ATP-dependent RNA helicase DDX27 [Macaca mulatta]
gi|355784407|gb|EHH65258.1| Putative ATP-dependent RNA helicase DDX27 [Macaca fascicularis]
Length = 763
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 185/306 (60%), Positives = 219/306 (71%), Gaps = 5/306 (1%)
Query: 8 GNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVE 67
G E+KE EGSE + +ED D+E D + L K LK +
Sbjct: 107 GKLEEKETKEGSEPKE---QEDLEGNDEEGSEDEASETD--YSSADENILTKADTLKVKD 161
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
++ ++ + FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LL
Sbjct: 162 RKKKKKGQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLL 221
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQ
Sbjct: 222 GKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQ 281
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
F ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 282 FCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEAD 341
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA
Sbjct: 342 RMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF 401
Query: 308 LRQEFV 313
LRQEF+
Sbjct: 402 LRQEFI 407
>gi|355683275|gb|AER97071.1| DEAD box polypeptide 27 [Mustela putorius furo]
Length = 712
Score = 356 bits (913), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 189/316 (59%), Positives = 228/316 (72%), Gaps = 10/316 (3%)
Query: 1 DDSSDEEGNKEDKEDNEGSEED---DVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRL 57
+D + G E+KE EGSE D D D +++ P++E + + ++ I K
Sbjct: 100 EDKEAKSGKSEEKEAKEGSEPDEQEDPDGKDEGG-PEEEDSETDYSSAEENILTKADTLK 158
Query: 58 AKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPI 117
KE K K+ + +E GG FFEDA +EN SF MNLSRPLLKAI + + PTPI
Sbjct: 159 VKERKKKKKKGQET----GG--FFEDASQYDENLSFQDMNLSRPLLKAITTMGFKQPTPI 212
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVL+LVPTRELG+Q
Sbjct: 213 QKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLILVPTRELGIQ 272
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
V+ VT+QLAQF S+ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS
Sbjct: 273 VHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSS 332
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+F
Sbjct: 333 IEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIF 392
Query: 298 VDNNHEVALNLRQEFV 313
V++N +VA LRQEF+
Sbjct: 393 VNSNTDVAPFLRQEFI 408
>gi|395829165|ref|XP_003787731.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Otolemur garnettii]
Length = 795
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 204 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 261
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 262 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 321
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 322 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 381
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIRLCS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 382 EQMKEIIRLCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 439
>gi|410953778|ref|XP_003983547.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27 [Felis catus]
Length = 920
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/306 (60%), Positives = 221/306 (72%), Gaps = 23/306 (7%)
Query: 11 EDKEDNEGSEED---DVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVE 67
E++ED EG +E+ D D+E D++ D+ + L K LK E
Sbjct: 278 EEQEDLEGKDEEGPEDEDSETDYSSADENI-------------------LTKADTLKVKE 318
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
++ + E G FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LL
Sbjct: 319 RKKKKGQEAGG-FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLL 377
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQ
Sbjct: 378 GKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQ 437
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
F ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 438 FCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEAD 497
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA
Sbjct: 498 RMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF 557
Query: 308 LRQEFV 313
LRQEFV
Sbjct: 558 LRQEFV 563
>gi|281351106|gb|EFB26690.1| hypothetical protein PANDA_000812 [Ailuropoda melanoleuca]
Length = 703
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 221/306 (72%), Gaps = 23/306 (7%)
Query: 11 EDKEDNEGSEED---DVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVE 67
E++ED+EG +E+ D D+E D++ D+ + L K LK E
Sbjct: 92 EEQEDHEGKDEEGPEDEDSETDYSSADENI-------------------LTKADTLKVKE 132
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
++ + E G FFEDA +EN SF MNLSRPLLKAI + + PTPIQ A IPV LL
Sbjct: 133 RKKKKGQETGG-FFEDASQYDENLSFQDMNLSRPLLKAITVMGFKQPTPIQKACIPVGLL 191
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQ
Sbjct: 192 GKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQ 251
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
F ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 252 FCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEAD 311
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA
Sbjct: 312 RMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF 371
Query: 308 LRQEFV 313
LRQEF+
Sbjct: 372 LRQEFI 377
>gi|440902879|gb|ELR53614.1| Putative ATP-dependent RNA helicase DDX27, partial [Bos grunniens
mutus]
Length = 741
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/258 (67%), Positives = 200/258 (77%), Gaps = 2/258 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 144 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 201
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF S+ L
Sbjct: 202 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCL 261
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 262 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 321
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 322 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 381
Query: 316 SNIDEVRLYNVLGLMLLR 333
E ++ +L+R
Sbjct: 382 RPNREGDREAIVAALLMR 399
>gi|301754403|ref|XP_002913034.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Ailuropoda melanoleuca]
Length = 764
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/306 (60%), Positives = 221/306 (72%), Gaps = 23/306 (7%)
Query: 11 EDKEDNEGSEED---DVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVE 67
E++ED+EG +E+ D D+E D++ D+ + L K LK E
Sbjct: 123 EEQEDHEGKDEEGPEDEDSETDYSSADENI-------------------LTKADTLKVKE 163
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
++ + E G FFEDA +EN SF MNLSRPLLKAI + + PTPIQ A IPV LL
Sbjct: 164 RKKKKGQETGG-FFEDASQYDENLSFQDMNLSRPLLKAITVMGFKQPTPIQKACIPVGLL 222
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQ
Sbjct: 223 GKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQ 282
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
F ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 283 FCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEAD 342
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA
Sbjct: 343 RMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF 402
Query: 308 LRQEFV 313
LRQEF+
Sbjct: 403 LRQEFI 408
>gi|122692565|ref|NP_001073740.1| probable ATP-dependent RNA helicase DDX27 [Bos taurus]
gi|142980808|sp|A1A4H6.1|DDX27_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|119223998|gb|AAI26498.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Bos taurus]
gi|296481114|tpg|DAA23229.1| TPA: probable ATP-dependent RNA helicase DDX27 [Bos taurus]
Length = 765
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/258 (67%), Positives = 200/258 (77%), Gaps = 2/258 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF S+ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 411
Query: 316 SNIDEVRLYNVLGLMLLR 333
E ++ +L+R
Sbjct: 412 RPNREGDREAIVAALLMR 429
>gi|344279740|ref|XP_003411645.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Loxodonta africana]
Length = 822
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 231 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 288
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF S+ L
Sbjct: 289 ATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCL 348
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 349 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 408
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 409 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 466
>gi|410931566|ref|XP_003979166.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like, partial
[Takifugu rubripes]
Length = 697
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 203/261 (77%)
Query: 73 ENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
E EG + FFEDA + +F MNLSRP+LKAI AL + PTPIQ A +PV LLGRD+C
Sbjct: 165 EEEGPESFFEDASQYNDQLTFDDMNLSRPILKAITALGFKQPTPIQKACVPVGLLGRDLC 224
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
CAATGTGKTAAF+LP+LERL+YKPR Q TRVLVLVPTRELG+QV+ VTRQLAQFTS+
Sbjct: 225 ACAATGTGKTAAFVLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHAVTRQLAQFTSIT 284
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
L+VGGL++K QE LR PD++IATPGRL+DHLHNTPSF LS IE+L+LDEADRMLDE
Sbjct: 285 TCLAVGGLDLKSQEVALRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDE 344
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+F QMKEIIRLCS RQTMLFSATM++ V DL +VSL +PVR+FV++N +VA LRQEF
Sbjct: 345 YFEEQMKEIIRLCSYNRQTMLFSATMSEEVKDLAAVSLKQPVRIFVNSNTDVAPYLRQEF 404
Query: 313 VSFSNIDEVRLYNVLGLMLLR 333
V E V+ +L R
Sbjct: 405 VRIRPNKEGDREAVVAALLTR 425
>gi|449486366|ref|XP_002191498.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Taeniopygia guttata]
Length = 757
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/238 (70%), Positives = 195/238 (81%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
G + FFEDA ++N SF MNLSRPLLKAI AL + PTPIQ A IPV LLG+DIC CA
Sbjct: 164 GAESFFEDASQYDDNLSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACA 223
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF+LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF++V L
Sbjct: 224 ATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSNVTTCL 283
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS +EVL+LDEADRMLDE+F
Sbjct: 284 AVGGLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFE 343
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIRLCS RQTMLFSATMT+ V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 344 EQMKEIIRLCSHHRQTMLFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 401
>gi|417412705|gb|JAA52724.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 788
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+N+ PTPIQ A IPV LLG+DIC CA
Sbjct: 197 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMNFKQPTPIQKACIPVGLLGKDICACA 254
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LPILERL+YKPR TRVLVLVPTRELG+QV+ V +QLAQF S+ L
Sbjct: 255 ATGTGKTAAFALPILERLIYKPRQAPVTRVLVLVPTRELGIQVHSVVKQLAQFCSITTCL 314
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 315 AVGGLDVKSQEAALRAVPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 374
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 375 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 432
>gi|189342956|gb|ACD91989.1| DEAD box polypeptide 27 [Homo sapiens]
gi|313883628|gb|ADR83300.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 765
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|354480665|ref|XP_003502525.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Cricetulus
griseus]
Length = 788
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/334 (55%), Positives = 233/334 (69%), Gaps = 6/334 (1%)
Query: 3 SSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGK 62
+ D+E E+ EG E D+ +ED + + K ++ + ++ L K
Sbjct: 123 AEDKEAKSGKVEEKEGRESCDLKGQEDLGGNEADSKDEDSETD---YSSGDEEVLTKADT 179
Query: 63 LKQVEAEEYEENEGGKE---FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
LK E ++ ++ + G+E FFEDA +++ SF MNLSRPLLKAI A+ + PTPIQ
Sbjct: 180 LKVKEKKKKKKKKKGQEAGGFFEDASEYDKSLSFQDMNLSRPLLKAITAMGFKQPTPIQK 239
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+
Sbjct: 240 ACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVH 299
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
VT+QLAQF SV L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IE
Sbjct: 300 SVTKQLAQFCSVTTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIE 359
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
VL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV+
Sbjct: 360 VLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVN 419
Query: 300 NNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
+N +VA LRQEF+ E ++ +L+R
Sbjct: 420 SNTDVAPFLRQEFIRIRPNREGDREAIVAALLMR 453
>gi|348564128|ref|XP_003467857.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Cavia
porcellus]
Length = 803
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/316 (59%), Positives = 228/316 (72%), Gaps = 9/316 (2%)
Query: 1 DDSSDEEGNKEDKEDNEGS---EEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRL 57
+D + G +EDK GS E++ ++ +E+ A DE + + ++ I K
Sbjct: 138 EDKEAKSGKREDKAAQSGSDLEEQEGLEGKEEAAGSADEESETDYSSAEENILTKADTLK 197
Query: 58 AKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPI 117
KE K K+ + +E GG FFEDA +E+ SF MNLSRPLLKAI A+ + PTPI
Sbjct: 198 VKEQKKKKKKGQEA----GG--FFEDASQYDESLSFQDMNLSRPLLKAITAMGFKQPTPI 251
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+Q
Sbjct: 252 QKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQ 311
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
V+ VT+QLAQF S+ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS
Sbjct: 312 VHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSS 371
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMT+ V DL SVSL PVR+F
Sbjct: 372 IEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTEEVKDLASVSLKNPVRIF 431
Query: 298 VDNNHEVALNLRQEFV 313
V++N +VA LRQEF+
Sbjct: 432 VNSNTDVAPFLRQEFI 447
>gi|426241599|ref|XP_004014677.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Ovis aries]
Length = 765
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 173/258 (67%), Positives = 200/258 (77%), Gaps = 2/258 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF S+ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 411
Query: 316 SNIDEVRLYNVLGLMLLR 333
E ++ +L+R
Sbjct: 412 RPNREGDREAIVAALLMR 429
>gi|40225538|gb|AAH11927.2| DDX27 protein, partial [Homo sapiens]
gi|48257213|gb|AAH16060.2| DDX27 protein, partial [Homo sapiens]
Length = 767
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 176 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 233
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 234 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 293
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 294 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 353
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 354 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 411
>gi|221043088|dbj|BAH13221.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|10434683|dbj|BAB14343.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|297707298|ref|XP_002830447.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Pongo abelii]
Length = 765
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|224593278|ref|NP_060365.7| probable ATP-dependent RNA helicase DDX27 [Homo sapiens]
gi|29427946|sp|Q96GQ7.2|DDX27_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|116497013|gb|AAI26288.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|119596072|gb|EAW75666.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_b [Homo
sapiens]
gi|120660308|gb|AAI30276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|219519028|gb|AAI44126.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|313883552|gb|ADR83262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 796
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 205 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 262
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 263 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 322
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 323 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 383 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 440
>gi|32425487|gb|AAH09304.2| DDX27 protein, partial [Homo sapiens]
Length = 769
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 178 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 235
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 236 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 295
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 296 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 355
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 356 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 413
>gi|114682555|ref|XP_001166506.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 5 [Pan
troglodytes]
Length = 796
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 205 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 262
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 263 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 322
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 323 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 383 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 440
>gi|15422163|gb|AAK95821.1| RNA helicase-like protein [Homo sapiens]
Length = 796
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 205 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 262
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 263 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 322
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 323 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 383 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 440
>gi|296200672|ref|XP_002747679.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Callithrix
jacchus]
Length = 764
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/307 (59%), Positives = 219/307 (71%), Gaps = 8/307 (2%)
Query: 7 EGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQV 66
E KE KE +E E++D+ D++ + D + + L K LK
Sbjct: 110 EKQKEGKEGSEPKEQEDLQGNNKEGSEDEDSETDYSSADENI--------LTKADTLKVK 161
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
+ ++ ++ + FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV L
Sbjct: 162 DRKKKKKGQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL 221
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
LG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLA
Sbjct: 222 LGKDICACAATGTGKTAAFALPVLERLIYKPRRGPVTRVLVLVPTRELGIQVHSVTRQLA 281
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
QF ++ L+VGGL+VK QE LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEA
Sbjct: 282 QFCNITTCLAVGGLDVKSQEVALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEA 341
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA
Sbjct: 342 DRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAP 401
Query: 307 NLRQEFV 313
LRQEF+
Sbjct: 402 FLRQEFI 408
>gi|351703078|gb|EHB05997.1| Putative ATP-dependent RNA helicase DDX27 [Heterocephalus glaber]
Length = 765
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 169/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +++ SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDDSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF S+ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCSITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|119596074|gb|EAW75668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_d [Homo
sapiens]
Length = 763
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 170/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 205 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 262
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 263 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 322
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 323 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 383 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 440
>gi|209447030|ref|NP_001129273.1| probable ATP-dependent RNA helicase DDX27 [Rattus norvegicus]
gi|169642292|gb|AAI60885.1| Ddx27 protein [Rattus norvegicus]
Length = 761
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/346 (53%), Positives = 231/346 (66%), Gaps = 32/346 (9%)
Query: 1 DDSSDEEGNKEDKEDNEGSE-------------EDDVDAEEDFALPDDEMKHDNIKNRQK 47
+D + G E+KE EGS+ D ++E D++ D+E+
Sbjct: 100 EDKEAKSGKAEEKEGQEGSDLKGQENLGENEAGSKDEESETDYSSEDEEI---------- 149
Query: 48 LIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIG 107
L K LK E ++ ++ + FFEDA +++ +F MNLSRPLLKAI
Sbjct: 150 ---------LTKADTLKVKEKKKKKKGQESGGFFEDASEYDKSLTFQDMNLSRPLLKAIT 200
Query: 108 ALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLV 167
A+ + PTPIQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLV
Sbjct: 201 AMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLV 260
Query: 168 LVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHL 227
LVPTRELG+QV+ VT+QLAQF S+ L+VGGL+VK QE+ LR PDI+IATPGRL+DHL
Sbjct: 261 LVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHL 320
Query: 228 HNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVS 287
HN PSF LS IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL S
Sbjct: 321 HNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLAS 380
Query: 288 VSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
VSL PVR+FV++N +VA LRQEF+ E ++ +L+R
Sbjct: 381 VSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMR 426
>gi|432859445|ref|XP_004069111.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Oryzias
latipes]
Length = 771
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 178/306 (58%), Positives = 221/306 (72%), Gaps = 20/306 (6%)
Query: 30 FALPDDEM--KHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPV 87
F D+E+ K D ++++ G++ +KR A E E + F EDA
Sbjct: 153 FGSSDEEVLTKSDTLRDK----GRRGKKRKAAE--------------EAPESFHEDASQF 194
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
++ SF MNLSRP+LKAI AL + PTPIQ A +PV+LLGRD+C CAATGTGKTAAFML
Sbjct: 195 DDQLSFDDMNLSRPILKAITALGFKQPTPIQKACVPVSLLGRDLCACAATGTGKTAAFML 254
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+LERL+YKPR Q TRVLVLVPTRELG+QV+ V RQLAQFTS+ L+VGGL++K QE+
Sbjct: 255 PVLERLIYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKSQEA 314
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LR PD++IATPGRL+DHLHNTP+F LS IE+L+LDEADRMLDE+F QMKEIIRLCS
Sbjct: 315 ALRAGPDVLIATPGRLIDHLHNTPNFELSHIEILILDEADRMLDEYFEEQMKEIIRLCSY 374
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
RQTMLFSATMT+ V DL +VSL +PVR+FV++N +VA LRQEF+ E V+
Sbjct: 375 NRQTMLFSATMTEEVKDLAAVSLKQPVRIFVNSNTDVAPFLRQEFIRIRPHREGDREAVV 434
Query: 328 GLMLLR 333
+L R
Sbjct: 435 AALLTR 440
>gi|403282331|ref|XP_003932605.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Saimiri
boliviensis boliviensis]
Length = 765
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/238 (71%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL++K QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 292 AVGGLDLKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 352 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|301621509|ref|XP_002940090.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Xenopus
(Silurana) tropicalis]
Length = 760
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 165/234 (70%), Positives = 193/234 (82%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFEDA +EN F +MNLSRPLLKAI A+++ PTPIQ A IP+ LLG+DIC CAATGT
Sbjct: 172 FFEDASQYDENLMFQEMNLSRPLLKAISAMSFTQPTPIQKACIPIGLLGKDICACAATGT 231
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAFMLP+LERL+YKPR+ TRVLVLVPTRELG+QV+ V+R LAQFT V L+VGG
Sbjct: 232 GKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVSRLLAQFTEVTTCLAVGG 291
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK QE+ LR PD++IATPGRL+DHLHN PSFSL IEVL+LDEADRMLDE+F QMK
Sbjct: 292 LDVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLDSIEVLILDEADRMLDEYFEEQMK 351
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EIIRLCS RQT+LFSATM++ V DL SVSL PVR+FV++N +VA LRQEFV
Sbjct: 352 EIIRLCSHQRQTLLFSATMSEEVKDLASVSLRNPVRIFVNSNTDVAPFLRQEFV 405
>gi|119596071|gb|EAW75665.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_a [Homo
sapiens]
Length = 440
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/234 (71%), Positives = 191/234 (81%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CAATGT
Sbjct: 176 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGT 235
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L+VGG
Sbjct: 236 GKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGG 295
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F QMK
Sbjct: 296 LDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMK 355
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 356 EIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 409
>gi|67967779|dbj|BAE00372.1| unnamed protein product [Macaca fascicularis]
Length = 764
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/312 (59%), Positives = 220/312 (70%), Gaps = 25/312 (8%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEG 61
+ D EGN E+ ++E SE D A+E NI + + K +K+ K+G
Sbjct: 122 EQEDLEGNDEEGSEDEASETDYSSADE------------NILTKADTLKVKDRKKKKKKG 169
Query: 62 KLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
+ GG FFEDA +EN SF MNLSRPLLKAI A+ + PT IQ A
Sbjct: 170 -----------QEAGG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTSIQKAC 216
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ V
Sbjct: 217 IPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSV 276
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
TRQLAQF ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL
Sbjct: 277 TRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVL 336
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N
Sbjct: 337 ILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSN 396
Query: 302 HEVALNLRQEFV 313
+VA LRQEF+
Sbjct: 397 TDVAPFLRQEFI 408
>gi|291409987|ref|XP_002721272.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Oryctolagus
cuniculus]
Length = 789
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/238 (70%), Positives = 193/238 (81%), Gaps = 2/238 (0%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +E+ SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 199 GG--FFEDASQYDESLSFQDMNLSRPLLKAISAMGFKQPTPIQKACIPVGLLGKDICACA 256
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF S+ L
Sbjct: 257 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCL 316
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF L+ IEVL+LDEADRMLDE+F
Sbjct: 317 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLNSIEVLILDEADRMLDEYFE 376
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 377 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 434
>gi|395506879|ref|XP_003757757.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Sarcophilus
harrisii]
Length = 766
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/234 (71%), Positives = 192/234 (82%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFEDA +EN +F MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CAATGT
Sbjct: 181 FFEDASQYDENLTFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGT 240
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF++V L+VGG
Sbjct: 241 GKTAAFALPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSTVTTCLAVGG 300
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F QMK
Sbjct: 301 LDVKSQEAALRAGPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMK 360
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EII+LCS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 361 EIIQLCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 414
>gi|334312364|ref|XP_001379053.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Monodelphis
domestica]
Length = 891
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 165/234 (70%), Positives = 191/234 (81%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFEDA +EN +F MNLSRPLLKAI + + PTPIQ A IPV LLG+DIC CAATGT
Sbjct: 307 FFEDASQYDENLTFQDMNLSRPLLKAITTMGFKQPTPIQKACIPVGLLGKDICACAATGT 366
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF++V L+VGG
Sbjct: 367 GKTAAFALPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSTVTTCLAVGG 426
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F QMK
Sbjct: 427 LDVKSQEAALRAGPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMK 486
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EII++CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 487 EIIQMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 540
>gi|390333392|ref|XP_783077.3| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Strongylocentrotus purpuratus]
Length = 734
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/236 (67%), Positives = 195/236 (82%)
Query: 78 KEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
K FFE+ + +F +MNLSRP+L+AI LN+ PTPIQ+ATIPVALLG+DIC CAAT
Sbjct: 140 KPFFEELRDDSKAMAFTEMNLSRPILRAISGLNFTEPTPIQSATIPVALLGKDICACAAT 199
Query: 138 GTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
GTGKTAAFMLP++ERLLYKP+ TRVLV+ PTRELGVQ++ V+RQL +FT++E L+V
Sbjct: 200 GTGKTAAFMLPVVERLLYKPKQAPVTRVLVVTPTRELGVQIFNVSRQLCEFTNIECCLAV 259
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL++K+QE+ LRK PDIVIATPGRL+DHLHN P+FSLS +EVL+LDEADRMLDE F Q
Sbjct: 260 GGLDIKLQEAALRKGPDIVIATPGRLIDHLHNAPTFSLSSVEVLILDEADRMLDEFFEEQ 319
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MKEII++CS RQTMLFSATMTD V DL VSL PVR+FV+ N +VA NL+QEF+
Sbjct: 320 MKEIIKMCSVARQTMLFSATMTDQVKDLALVSLKNPVRIFVNENTDVAYNLQQEFI 375
>gi|405953609|gb|EKC21239.1| Putative ATP-dependent RNA helicase DDX27 [Crassostrea gigas]
Length = 740
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 157/242 (64%), Positives = 198/242 (81%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE + EF E ++ +F MN+SRPL+K +G +N+ PTPIQ ATIP+ALLGRD+
Sbjct: 149 EEEKEKVEFSETVDSYDDKLTFQDMNVSRPLMKGLGQMNFTKPTPIQTATIPIALLGRDL 208
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
C CA TG+GKT AFMLPILERL+Y+ +++ TRVLVLVPTREL VQV+ V RQLAQ+T++
Sbjct: 209 CACAVTGSGKTVAFMLPILERLMYRTQEEAATRVLVLVPTRELAVQVHTVARQLAQYTNI 268
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
E+ LS GGL++K QE+ LR PDIVIATPGRL+DHLHN+P+FSL +IE+LVLDEADRMLD
Sbjct: 269 EIVLSAGGLDIKAQEAALRMKPDIVIATPGRLIDHLHNSPNFSLRNIEILVLDEADRMLD 328
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
E+FA QM EIIR C++TRQTMLFSATM++AV DL SVSL +PV++FV+ N +VAL LRQE
Sbjct: 329 EYFAEQMNEIIRQCAQTRQTMLFSATMSEAVQDLASVSLKQPVKIFVNQNTDVALGLRQE 388
Query: 312 FV 313
F+
Sbjct: 389 FI 390
>gi|260798638|ref|XP_002594307.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
gi|229279540|gb|EEN50318.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
Length = 563
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 185/218 (84%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPL+KAI + + +PTPIQ ATIPVALLG+D+C CAATGTGKTAAFMLP+LERLLY
Sbjct: 1 MNLSRPLVKAISQMKFHHPTPIQKATIPVALLGKDVCACAATGTGKTAAFMLPVLERLLY 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KPR TRVLVL PTREL VQV+QV+RQLAQFTSVE++L+ GGL+++ QE+ LR PD+
Sbjct: 61 KPRQAPVTRVLVLAPTRELAVQVHQVSRQLAQFTSVEISLAAGGLDIRTQEAALRLGPDV 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
VIATPGRL+DHLHNTPSF L IEVL+LDEADRMLDE F QM EIIRLC+R RQTMLFS
Sbjct: 121 VIATPGRLIDHLHNTPSFDLKSIEVLILDEADRMLDEFFEEQMNEIIRLCARKRQTMLFS 180
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
ATM+D V DL +VSL PV++FV+ N +VA NLRQEF+
Sbjct: 181 ATMSDQVKDLAAVSLENPVKLFVNENTDVAFNLRQEFI 218
>gi|443720455|gb|ELU10207.1| hypothetical protein CAPTEDRAFT_141736, partial [Capitella teleta]
Length = 616
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 162/260 (62%), Positives = 201/260 (77%), Gaps = 1/260 (0%)
Query: 75 EGGK-EFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+G K + E+ +++ +F MNLSRPLLKAI + + PTPIQ ATIPVALLG+DIC
Sbjct: 17 DGAKISYSEEVTSYDDSVAFPDMNLSRPLLKAIANMGFTQPTPIQGATIPVALLGKDICA 76
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
CAATGTGKTAAF+LP+LERLLY+PR TRVLVL PTREL VQ++ V RQL QFT++E
Sbjct: 77 CAATGTGKTAAFLLPVLERLLYRPRQAPVTRVLVLTPTRELAVQIHTVARQLTQFTNIET 136
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
+LS GG++VK QE+ LR PDIVIATPGRL+DHLHN P+F+L+ +EVL+LDEADRMLDE+
Sbjct: 137 SLSAGGMDVKAQEAALRLGPDIVIATPGRLIDHLHNAPNFNLNSVEVLILDEADRMLDEY 196
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
FA QMKE+I LC+ RQTMLFSATMT+ V DL +VSL PV++FV+ N +VALNLRQEF+
Sbjct: 197 FAEQMKEVISLCATVRQTMLFSATMTEEVKDLAAVSLNSPVKIFVNENTQVALNLRQEFI 256
Query: 314 SFSNIDEVRLYNVLGLMLLR 333
E V+G +L R
Sbjct: 257 RIRPNREGDREAVVGALLKR 276
>gi|324505328|gb|ADY42291.1| ATP-dependent RNA helicase DDX27 [Ascaris suum]
Length = 688
Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 159/226 (70%), Positives = 185/226 (81%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E + SF MNLSRP+LKA+GA + PTPIQAA IP+AL GRD+C CAATGTGKTAAFML
Sbjct: 142 EPSVSFEYMNLSRPMLKAVGACGFTKPTPIQAACIPLALAGRDLCACAATGTGKTAAFML 201
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PILERLL+KP+ TRVLVLVPTREL +QV+ VTR L+QF+ VE+ L GGL++K QE+
Sbjct: 202 PILERLLFKPKQKSVTRVLVLVPTRELAMQVFHVTRLLSQFSQVEICLCAGGLDIKAQEA 261
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LR PDIVIATPGRL+DHLHN P+FSL DIEVLVLDEADRMLDE FA QMKE+IRLCS
Sbjct: 262 ALRLGPDIVIATPGRLIDHLHNAPNFSLHDIEVLVLDEADRMLDEAFADQMKELIRLCSA 321
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQT+LFSATMTD + L +VSL PVR+F++ N E ALNLRQEF+
Sbjct: 322 NRQTLLFSATMTDQIEQLAAVSLKNPVRIFINENTETALNLRQEFI 367
>gi|345328224|ref|XP_001507068.2| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Ornithorhynchus anatinus]
Length = 716
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/288 (61%), Positives = 212/288 (73%), Gaps = 18/288 (6%)
Query: 26 AEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAP 85
+E D+ +E NI + + K++K+ K G + GG FFEDA
Sbjct: 91 SESDY-SSAEE----NILTKADTLKVKERKKRKKGG-----------QEAGG--FFEDAS 132
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
+E+ SF MNLSRPLLKAI A+ + PTPIQ A IPV +LG+DIC CAATGTGKTAAF
Sbjct: 133 KYDESLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGMLGKDICACAATGTGKTAAF 192
Query: 146 MLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+QLAQF++V L+VGGL+VK Q
Sbjct: 193 ALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFSNVTTCLAVGGLDVKTQ 252
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
E+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F QMKEII++C
Sbjct: 253 EAALRAGPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIKMC 312
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
S RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEFV
Sbjct: 313 SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFV 360
>gi|395752428|ref|XP_003779421.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 2
[Pongo abelii]
Length = 796
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/269 (63%), Positives = 193/269 (71%), Gaps = 33/269 (12%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 174 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 231
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L
Sbjct: 232 ATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCL 291
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD-------- 247
+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADSPPVGTAC 351
Query: 248 -----------------------RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVND 284
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V D
Sbjct: 352 PHAPTLWLLHLPFPQPGAISCPFRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKD 411
Query: 285 LVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
L SVSL PVR+FV++N +VA LRQEF+
Sbjct: 412 LASVSLKNPVRIFVNSNTDVAPFLRQEFI 440
>gi|15030137|gb|AAH11321.1| Ddx27 protein [Mus musculus]
Length = 572
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/238 (67%), Positives = 188/238 (78%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+Y
Sbjct: 1 MNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIY 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KPR TRVLVLVPTRELG+QV+ VT+QLAQF S+ L+VGGL+VK QE+ LR PDI
Sbjct: 61 KPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDI 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
+IATPGRL+DHLHN PSF LS IEVL+LDEAD+MLDE+F QMKEIIR+CS RQTMLFS
Sbjct: 121 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADKMLDEYFEEQMKEIIRMCSHHRQTMLFS 180
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
ATMTD V DL SVSL PVR+FV++N +VA LRQEF+ E ++ +L+R
Sbjct: 181 ATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVAALLMR 238
>gi|339250128|ref|XP_003374049.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316969700|gb|EFV53757.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 693
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/277 (58%), Positives = 206/277 (74%), Gaps = 5/277 (1%)
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTP 116
L +E K A+E E+N FF++ + +F +MNLSR L KAI ++NY+ PTP
Sbjct: 123 LIREKLRKGKPAKEKEDN-----FFDNRSKYNISLTFEEMNLSRSLNKAISSMNYVNPTP 177
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
IQ+A IPVALLG+DIC CAATGTGKT A+M+PILERLL+KP + TRVLV+VPTREL +
Sbjct: 178 IQSACIPVALLGKDICACAATGTGKTCAYMIPILERLLFKPVGRRITRVLVMVPTRELAM 237
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
QVY+ LA++TS+ +ALS GG+++K QE+ LR PD+VIATPGRL+DHLHN+P F+L+
Sbjct: 238 QVYETGTTLAKYTSISIALSTGGMDLKSQEAALRLNPDVVIATPGRLIDHLHNSPGFNLN 297
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+E+LVLDEADRMLDEHF QM EI+RLCS TRQ MLFSATMTD V DL SVSL +PV++
Sbjct: 298 GVEILVLDEADRMLDEHFEEQMLEIMRLCSPTRQAMLFSATMTDKVKDLASVSLKKPVKL 357
Query: 297 FVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
FV+ N E+ALNLRQ+FV E L +L R
Sbjct: 358 FVNENTEMALNLRQQFVRIRKERECSREASLAALLKR 394
>gi|426392064|ref|XP_004062380.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Gorilla
gorilla gorilla]
Length = 575
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/219 (72%), Positives = 181/219 (82%), Gaps = 1/219 (0%)
Query: 96 MNLSRPLLK-AIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLL 154
MNLSRPLLK AI A+ + PTPIQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+
Sbjct: 1 MNLSRPLLKVAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLI 60
Query: 155 YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPD 214
YKPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L+VGGL+VK QE+ LR PD
Sbjct: 61 YKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPD 120
Query: 215 IVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLF 274
I+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLF
Sbjct: 121 ILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLF 180
Query: 275 SATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
SATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 181 SATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 219
>gi|340372235|ref|XP_003384650.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Amphimedon queenslandica]
Length = 598
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/269 (60%), Positives = 201/269 (74%), Gaps = 3/269 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
++ E K FF AP + N +F MNLSRPLLKA+ L + PT +QA TIP+AL+G+DI
Sbjct: 126 DKEERKKAFFSRAPVLSVNVAFTDMNLSRPLLKAVTLLGFTSPTSVQARTIPLALMGKDI 185
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
C CAATGTGKTAAFMLPILERLLY+P ++TRVL+L+PTREL +QV+ V + LAQ T +
Sbjct: 186 CACAATGTGKTAAFMLPILERLLYRPTRMRSTRVLILLPTRELAIQVHSVGKALAQNTKI 245
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
++ L+ GGLE + QE+ LRK PDIVIATPGRL+DHLHNTPSFSL IE+LVLDEADRMLD
Sbjct: 246 DLCLAAGGLEGRSQEASLRKSPDIVIATPGRLVDHLHNTPSFSLQAIEILVLDEADRMLD 305
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
EHF QM EIIRLC +RQT+LFSATMTD V +L +SL PVRVFVD+N + A NL QE
Sbjct: 306 EHFLDQMNEIIRLCPVSRQTLLFSATMTDEVEELARLSLHNPVRVFVDSNTDTADNLHQE 365
Query: 312 FV---SFSNIDEVRLYNVLGLMLLRENCL 337
FV S D + + L L +++CL
Sbjct: 366 FVRIRSNKEADREAIVSALCLRSFKDHCL 394
>gi|10732632|gb|AAG22482.1|AF193054_1 unknown [Homo sapiens]
Length = 312
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/218 (72%), Positives = 177/218 (81%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+Y
Sbjct: 1 MNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIY 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L+VGGL+VK QE+ LR PDI
Sbjct: 61 KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDI 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFS
Sbjct: 121 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFS 180
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
ATMTD V DL SVSL PVR+FV+ H LRQEF+
Sbjct: 181 ATMTDEVKDLASVSLKNPVRIFVNKQHRCGSLLRQEFI 218
>gi|391340178|ref|XP_003744422.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Metaseiulus occidentalis]
Length = 721
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 152/222 (68%), Positives = 189/222 (85%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF M+LSRPLLKA+ A+ ++ PTPIQ + IPVAL GRDI CAATGTGKTAAFMLP+LE
Sbjct: 145 SFQNMDLSRPLLKALTAMKFVNPTPIQRSAIPVALGGRDIYACAATGTGKTAAFMLPVLE 204
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+ R + TRV+V+VPTREL VQVYQV+ QLAQFTS+ VAL+ GGL++KVQES LR+
Sbjct: 205 RLLYRSRGEIVTRVIVVVPTRELSVQVYQVSIQLAQFTSINVALATGGLDLKVQESHLRQ 264
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDI+IATPGRL+DHL NTP+F+L +IEV++LDEAD++L++ FA Q+KEII+ C+ TRQT
Sbjct: 265 NPDIIIATPGRLIDHLQNTPTFNLHNIEVMILDEADKLLEDQFAEQLKEIIKQCAPTRQT 324
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATM+D V DL +SL PVR+F++NN +VALNLRQEFV
Sbjct: 325 MLFSATMSDRVQDLAKLSLKDPVRLFLNNNTDVALNLRQEFV 366
>gi|393910125|gb|EJD75750.1| DEAD box polypeptide 27 [Loa loa]
Length = 684
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 152/239 (63%), Positives = 186/239 (77%), Gaps = 5/239 (2%)
Query: 80 FFEDAPPV-----EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGC 134
FF++A E SF QMNLSR LLKAI A + PT IQ+ IP+AL GRD+C C
Sbjct: 125 FFDNATSTNALNAETAISFDQMNLSRALLKAITACGFTEPTRIQSTCIPLALAGRDLCAC 184
Query: 135 AATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVA 194
+ATGTGKTAAFMLP+LERLLY+P+ TRV+VL PTREL +Q +QV+RQL+QF +++
Sbjct: 185 SATGTGKTAAFMLPVLERLLYRPQQKAMTRVVVLTPTRELAIQTFQVSRQLSQFMRIDIC 244
Query: 195 LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHF 254
L GGL++K QE+ LR+ PDIVIATPGRL+DHLHN P+FSL ++E+LVLDEADRMLDE F
Sbjct: 245 LCAGGLDLKTQEAALRQRPDIVIATPGRLIDHLHNAPNFSLVNVEILVLDEADRMLDEAF 304
Query: 255 ASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
A QMKEII LC++ RQTMLFSATMTD V +L +VSL PV++F+ N E ALNLRQEFV
Sbjct: 305 ADQMKEIIHLCAQNRQTMLFSATMTDQVEELAAVSLKNPVKLFITGNTETALNLRQEFV 363
>gi|198423018|ref|XP_002125988.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
[Ciona intestinalis]
Length = 718
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 180/224 (80%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N F QMN+SRPLLKAI +NY+ PTPIQ A IP+ LLGRDIC CAATGTGKTAAFMLP+
Sbjct: 170 NLGFQQMNISRPLLKAISEINYVTPTPIQQAAIPIGLLGRDICACAATGTGKTAAFMLPV 229
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+ + TRVL LVPTREL VQVY VT LAQ +++ + L+ GGL++K QE+ L
Sbjct: 230 LERLLYRTQSTPITRVLCLVPTRELAVQVYSVTHHLAQHSNLRICLAAGGLDMKSQEAAL 289
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R+ PDIVIATPGRL+DHLHNTPSF L +E+L+LDEADRMLDE F QM EII+LCS R
Sbjct: 290 RQGPDIVIATPGRLIDHLHNTPSFDLQMVEILILDEADRMLDEFFEDQMNEIIKLCSHHR 349
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATM++ V +L +VSL PV++FV++N +VA LRQEF+
Sbjct: 350 QTMLFSATMSEQVQELAAVSLKNPVKIFVNSNTDVAPFLRQEFI 393
>gi|196003440|ref|XP_002111587.1| hypothetical protein TRIADDRAFT_23405 [Trichoplax adhaerens]
gi|190585486|gb|EDV25554.1| hypothetical protein TRIADDRAFT_23405, partial [Trichoplax
adhaerens]
Length = 463
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/237 (63%), Positives = 189/237 (79%), Gaps = 1/237 (0%)
Query: 78 KEFFEDAPPVEE-NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
K+ F + PPV++ SF +NLSRPLLKAI L + +PTPIQ++TIP+ALLG+DIC CAA
Sbjct: 3 KDAFFEKPPVQDLTKSFRDINLSRPLLKAISTLGFEHPTPIQSSTIPIALLGKDICACAA 62
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
TGTGKTAAFMLPILERL+Y+P+ TRVLVLVPTREL +QV+ V + L Q+T +E L+
Sbjct: 63 TGTGKTAAFMLPILERLIYRPKRIPVTRVLVLVPTRELAIQVFSVGKSLCQYTDIEFCLA 122
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GGL++ QE+ LR+ PDIVIATPGRL+DHLHNTPSF L IE+LVLDEADR + EHF
Sbjct: 123 AGGLDIASQEAALRRNPDIVIATPGRLVDHLHNTPSFDLQGIEILVLDEADRQIHEHFKD 182
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QM E+IRL + RQTMLFSATMTD V +L ++SL +P+R+F++ N +VA NLRQEF+
Sbjct: 183 QMDELIRLSPKGRQTMLFSATMTDEVEELATLSLNKPIRLFINRNTDVANNLRQEFI 239
>gi|156379137|ref|XP_001631315.1| predicted protein [Nematostella vectensis]
gi|156218353|gb|EDO39252.1| predicted protein [Nematostella vectensis]
Length = 298
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 155/235 (65%), Positives = 190/235 (80%), Gaps = 1/235 (0%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLKA+ L +++PTPIQA+TIPVAL+G+D+C CAATGTGKTAAFMLPILERLLY
Sbjct: 1 MNLSRPLLKAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLY 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
+P RVLV+ PTREL +Q++ VT L+++T+++V L+ GGL++K QE+ LRK PDI
Sbjct: 61 RPTQSPAIRVLVITPTRELAIQIHSVTNNLSKYTNIQVCLAAGGLDLKSQEAALRKNPDI 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
VIATPGRL+DHLHNT SF L IE+LVLDEADRMLDEHF QM EII+L R RQTMLFS
Sbjct: 121 VIATPGRLVDHLHNTMSFGLQSIEILVLDEADRMLDEHFRDQMNEIIKLSPRGRQTMLFS 180
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVLGL 329
ATMTD V +LV++SL +PVR+FVD+N +VA NLRQEF+ N +E RL V L
Sbjct: 181 ATMTDEVEELVTLSLNQPVRLFVDSNTDVAYNLRQEFIRIRPNREEDRLAIVAAL 235
>gi|392884823|ref|NP_490891.2| Protein Y71G12B.8 [Caenorhabditis elegans]
gi|373219451|emb|CCD67990.1| Protein Y71G12B.8 [Caenorhabditis elegans]
Length = 739
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 182/224 (81%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N SF QMNLSR +LKA Y PTPIQ A IPVAL G+DIC CAATGTGKTAAF+LPI
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LER++Y+P+ TRVLVLVPTREL +QV+QV R+L+ F +EV L GGL++K QE+ L
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAAL 266
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R PD+V+ATPGRL+DHLHN+PSF+LS+IEVLVLDEADRML+E F QM E+IRLC++ R
Sbjct: 267 RSGPDVVVATPGRLIDHLHNSPSFNLSNIEVLVLDEADRMLEEAFRDQMNELIRLCAQNR 326
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT+LFSATMT+ +++L S+SL +PV++F++ N + AL LRQEF+
Sbjct: 327 QTLLFSATMTEEIDELASMSLQKPVKIFINENTDTALKLRQEFI 370
>gi|397475811|ref|XP_003809313.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Pan paniscus]
Length = 605
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/249 (63%), Positives = 181/249 (72%), Gaps = 31/249 (12%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+Y
Sbjct: 1 MNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIY 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KPR TRVLVLVPTRELG+QV+ VTRQLAQF ++ L+VGGL+VK QE+ LR PDI
Sbjct: 61 KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDI 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD---------------------------- 247
+IATPGRL+DHLHN PSF LS IEVL+LDEAD
Sbjct: 121 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADSPPVGTACPHAPTLWLLHLPFPQPGAIS 180
Query: 248 ---RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
RMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +V
Sbjct: 181 CPFRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDV 240
Query: 305 ALNLRQEFV 313
A LRQEF+
Sbjct: 241 APFLRQEFI 249
>gi|308497817|ref|XP_003111095.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
gi|308240643|gb|EFO84595.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
Length = 749
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 179/224 (79%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N SF QMNLSR +LKA Y PTPIQ A IPVAL G+DIC CAATGTGKTAAF+LPI
Sbjct: 154 NVSFEQMNLSRQILKACAGAGYTDPTPIQQACIPVALSGKDICACAATGTGKTAAFVLPI 213
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LER++Y+P+ TRVLVLVPTREL +QV+QV R+L+ F +EV L GGL++K QE+ L
Sbjct: 214 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAAL 273
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R PD+V+ATPGRL+DHLHN+P+F+L IEVLVLDEADRML+E F QM E+IRLC+ R
Sbjct: 274 RSGPDVVVATPGRLIDHLHNSPNFNLGSIEVLVLDEADRMLEEAFRDQMNELIRLCAENR 333
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT+LFSATMT+ +++L S+SL RPV++F++ N + AL LRQEF+
Sbjct: 334 QTLLFSATMTEEIDELASMSLQRPVKIFINENTDTALKLRQEFI 377
>gi|348544540|ref|XP_003459739.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Oreochromis
niloticus]
Length = 736
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/277 (57%), Positives = 195/277 (70%), Gaps = 30/277 (10%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAI---------------GALNYIYPTP 116
++ + + F+EDA ++ +F MNLSRP+LKAI
Sbjct: 147 KKRKAAESFYEDASQYDDQLTFDDMNLSRPILKAITALGFKQPTPIQKAC---------- 196
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
+PV LLG+D+C CAATGTGKTAAFMLP+LERL+YKPR Q TRVLVLVPTRELG+
Sbjct: 197 -----VPVGLLGKDLCACAATGTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGI 251
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
QV+ V RQLAQFTS+ L+VGGL++K QE+ LR PDI+IATPGRL+DHLHNTPSF L+
Sbjct: 252 QVHSVARQLAQFTSITTCLAVGGLDLKSQEAALRAGPDILIATPGRLIDHLHNTPSFELT 311
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
IE+L+LDEADRMLDE+F QMKEIIRLCS RQTMLFSATMT+ V DL +VSL +PVR+
Sbjct: 312 HIEILILDEADRMLDEYFEEQMKEIIRLCSYNRQTMLFSATMTEEVKDLAAVSLKQPVRI 371
Query: 297 FVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
FV++N +VA LRQEFV E V+ +L R
Sbjct: 372 FVNSNTDVAPFLRQEFVRIRPHREGDREAVVAALLTR 408
>gi|13384106|gb|AAK21271.1| RNA helicase-like protein [Homo sapiens]
Length = 561
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 169/205 (82%)
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
+ + PTPIQ A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVL
Sbjct: 1 MGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVL 60
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
VPTRELG+QV+ VTRQLAQF ++ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLH
Sbjct: 61 VPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLH 120
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
N PSF LS IEVL+LDEADRMLDE+F QMKEIIR+CS RQTMLFSATMTD V DL SV
Sbjct: 121 NCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASV 180
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFV 313
SL PVR+FV++N +VA LRQEF+
Sbjct: 181 SLKNPVRIFVNSNTDVAPFLRQEFI 205
>gi|449684384|ref|XP_002156411.2| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Hydra magnipapillata]
Length = 544
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 185/235 (78%), Gaps = 1/235 (0%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLKAI L + +PT IQ++TIP+ALLG+D+C CA TG+GKTAAFMLPILERLL+
Sbjct: 1 MNLSRPLLKAINELGFEHPTKIQSSTIPIALLGKDLCACATTGSGKTAAFMLPILERLLF 60
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KP+ T++L++ + V VY V+ LA+F+++++ L+ GGL+ + QE++LRK PD+
Sbjct: 61 KPKQTAXTKILLVFICKNFCVXVYSVSESLAKFSNIQLGLATGGLDSRSQEAILRKNPDV 120
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
VIATPGRL+DHLHNTPSF+L IE+LVLDEADRML+EHF QMKEIIRLC R RQTMLFS
Sbjct: 121 VIATPGRLIDHLHNTPSFNLQTIEILVLDEADRMLEEHFHDQMKEIIRLCPRGRQTMLFS 180
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEV-RLYNVLGL 329
ATMTD VN L+S+SL PV++FVD N +VA +L QEFV + E RL V+ L
Sbjct: 181 ATMTDEVNALMSLSLNNPVKLFVDQNTDVASSLHQEFVRIRSTREADRLAVVVAL 235
>gi|444731361|gb|ELW71716.1| putative ATP-dependent RNA helicase DDX27 [Tupaia chinensis]
Length = 735
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/238 (63%), Positives = 176/238 (73%), Gaps = 24/238 (10%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CA
Sbjct: 171 GG--FFEDASEYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 228
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATGT TRVLVLVPTRELG+QV+ VT+QLAQF S+ L
Sbjct: 229 ATGT----------------------VTRVLVLVPTRELGIQVHAVTKQLAQFCSITTCL 266
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+VGGL+VK QE+ LR PD++IATPGRL+DHLHN PSF LS++EVL+LDEADRMLDE+F
Sbjct: 267 AVGGLDVKSQEAALRAAPDVLIATPGRLIDHLHNCPSFHLSNVEVLILDEADRMLDEYFE 326
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 327 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 384
>gi|268563805|ref|XP_002638939.1| Hypothetical protein CBG22166 [Caenorhabditis briggsae]
Length = 753
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/322 (50%), Positives = 211/322 (65%), Gaps = 45/322 (13%)
Query: 19 SEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGK 78
+E DDV+ ED D+++ K + + +KK K GK ++V G
Sbjct: 84 NEADDVEINED-----DDVQQLGGKETRDTVREKK-----KAGKSRKVA--------DGD 125
Query: 79 EFFE---DAPPVEENS--SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+FF D ++ N SF QMNLSR +LKA Y PTPIQ A IPVAL G+DIC
Sbjct: 126 DFFSALIDGKSLDTNVNVSFEQMNLSRQILKACAGAGYSDPTPIQQACIPVALTGKDICA 185
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
CAATGTGKTAAF+LPILER++Y+P+ TRVLVLVPTREL +QV+QV R+L+ F +EV
Sbjct: 186 CAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEV 245
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE-------------- 239
L GGL++K QE+ LR PD+V+ATPGRL+DHLHN+PSF+L+ IE
Sbjct: 246 CLCAGGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLASIEVFLSLEKEKFRNSE 305
Query: 240 --------VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLT 291
VLVLDEADRML+E F QM E+IRLC+ RQT+LFSATMT+ +++L S+SL
Sbjct: 306 IQESKNLKVLVLDEADRMLEEAFRDQMNELIRLCAENRQTLLFSATMTEEIDELASMSLK 365
Query: 292 RPVRVFVDNNHEVALNLRQEFV 313
+PV++F++ N + AL LRQEF+
Sbjct: 366 KPVKIFINENTDTALKLRQEFI 387
>gi|409051554|gb|EKM61030.1| hypothetical protein PHACADRAFT_24252 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 145/236 (61%), Positives = 181/236 (76%), Gaps = 2/236 (0%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F DA PVE++SSF MNLSRP+LKAI +LN+ PTPIQAATIPVALLG+DI G A TG+
Sbjct: 183 FASDAGPVEQHSSFMSMNLSRPVLKAIASLNFTKPTPIQAATIPVALLGKDIVGNAVTGS 242
Query: 140 GKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
GKTAAFM+P++ERL+Y+ R + TR +VLVPTRELGVQ Y+V +LA T + L V
Sbjct: 243 GKTAAFMIPMIERLMYRERGKKAAATRCMVLVPTRELGVQCYEVGTKLAAHTDIRFCLVV 302
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL +K QE LR PDI+IATPGRL+DH+ NTP+F+L +++LVLDEADRML E F +
Sbjct: 303 GGLSLKSQEVALRTRPDIIIATPGRLIDHIRNTPTFTLDTLDILVLDEADRMLSEGFQDE 362
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ EII+ C +RQTMLFSATMTD+V++LV +SL +PVR+FVD A L QEFV
Sbjct: 363 LAEIIKSCPVSRQTMLFSATMTDSVDELVRMSLNQPVRLFVDPKRTTARGLLQEFV 418
>gi|390604335|gb|EIN13726.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 785
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/244 (59%), Positives = 187/244 (76%), Gaps = 3/244 (1%)
Query: 73 ENEGGKEFF-EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
E E FF D P E +S+F MNLSRP+LKAI +L++ PTPIQAATIPVALLG+D+
Sbjct: 179 EKERKAAFFASDTGPSETHSTFLSMNLSRPILKAITSLSFHKPTPIQAATIPVALLGKDV 238
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFT 189
G A TG+GKTAAF++P+LERLLY+ R ++ TR LVLVPTRELGVQ ++V +LA +T
Sbjct: 239 VGNAVTGSGKTAAFIIPMLERLLYRDRAKKSAATRCLVLVPTRELGVQCFEVGTKLATYT 298
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
+ L+VGGL VK QE+ LR PD+VIATPGRL+DHL N+PSF+L +++LVLDEADRM
Sbjct: 299 DIRFCLAVGGLSVKSQEAALRSKPDVVIATPGRLIDHLRNSPSFNLDALDILVLDEADRM 358
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L + FA ++ EII+ C ++RQTMLFSATMTD+V++LV +SL +PVR+FVD A L
Sbjct: 359 LSDGFADELAEIIKSCPKSRQTMLFSATMTDSVDELVKMSLDKPVRLFVDPKRSTAKGLI 418
Query: 310 QEFV 313
QEFV
Sbjct: 419 QEFV 422
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/249 (58%), Positives = 188/249 (75%), Gaps = 2/249 (0%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
E + E++ F ++ E+SSF MNLSRP+LKA+ L + PTPIQAATIPVAL
Sbjct: 155 EETQAEKDRKAAYFDSESGAPAEHSSFLTMNLSRPILKALTTLGFTKPTPIQAATIPVAL 214
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQ 184
LG+D+ G A TG+GKTAAF +P+LERLLY+ + + TR LVLVPTREL VQ Y+V ++
Sbjct: 215 LGKDVVGNAVTGSGKTAAFTIPMLERLLYREKGKKAAATRCLVLVPTRELAVQCYEVGKK 274
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LA T +EVAL VGGL +K QE+ LR PDIVIATPGRL+DH+HN+PSF+L +++VLVLD
Sbjct: 275 LAAHTDIEVALIVGGLSLKSQEATLRARPDIVIATPGRLIDHIHNSPSFTLDNLDVLVLD 334
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADRML + FA ++ EII+ C ++RQTMLFSATMTD+V++LV +SL +PVR+FVD
Sbjct: 335 EADRMLSDGFADELTEIIKACPKSRQTMLFSATMTDSVDELVRMSLDKPVRLFVDPKRST 394
Query: 305 ALNLRQEFV 313
A L QEFV
Sbjct: 395 AKGLIQEFV 403
>gi|392597372|gb|EIW86694.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 750
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/314 (50%), Positives = 204/314 (64%), Gaps = 34/314 (10%)
Query: 11 EDKEDNE--GSEEDDVDAE--EDFALP----DDEMKHDNIKNRQKLIGKKKQKRLAKEGK 62
ED ED E G EE D E EDF DDE + D + +
Sbjct: 112 EDDEDIEASGDEEGDSSGERSEDFGSASSDEDDEGQSDEVSD------------------ 153
Query: 63 LKQVEAEEYEENEGGKEFFEDA-PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
E E + + FFED+ ++SF MNLSRPL KA+ L + PTPIQ A
Sbjct: 154 -----LETQAEKDRKRAFFEDSDTTTPAHASFLTMNLSRPLQKALTTLGFNKPTPIQVAA 208
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLY--KPRDDQNTRVLVLVPTRELGVQVY 179
IPVAL+G+DI G A TG+GKTAAF++P+LERLLY K + TR L+LVPTRELGVQ Y
Sbjct: 209 IPVALIGKDIVGNAVTGSGKTAAFVIPMLERLLYREKGKSAAATRCLILVPTRELGVQCY 268
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
+V ++LA +T +AL VGGL +K QE+ LR PD+VIATPGRL+DH+HN+PSF+L ++
Sbjct: 269 EVAQKLAAYTDARIALVVGGLSLKSQEAALRTRPDVVIATPGRLVDHIHNSPSFNLDALD 328
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADRML E FA ++ EII+ C ++RQTMLFSATMTD+V++LV +SL +PVR+FVD
Sbjct: 329 ILVLDEADRMLSEGFADELSEIIKACPKSRQTMLFSATMTDSVDELVKMSLNKPVRLFVD 388
Query: 300 NNHEVALNLRQEFV 313
A L QEFV
Sbjct: 389 PRRTTARGLVQEFV 402
>gi|328772256|gb|EGF82294.1| hypothetical protein BATDEDRAFT_34342 [Batrachochytrium
dendrobatidis JAM81]
Length = 741
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/271 (53%), Positives = 191/271 (70%), Gaps = 4/271 (1%)
Query: 67 EAEEYEENEGGKEFFE---DAPPVEE-NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATI 122
E E+ +++ EFF+ D P E SF + LSRP+LK+I AL Y+ PT IQA I
Sbjct: 159 EPEDIVKDKSKAEFFDLESDKPEHREITESFQSLQLSRPVLKSIAALGYVRPTDIQARAI 218
Query: 123 PVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVT 182
P+AL GRDICG A TG+GKTAAF++PI+ERLL++P++D TRVL+LVPTRELGVQ V
Sbjct: 219 PLALQGRDICGSAVTGSGKTAAFIIPIVERLLFRPKNDATTRVLILVPTRELGVQCQSVA 278
Query: 183 RQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
+++FT + L VGGL K QE+ LR PDI+IATPGRL+DH+HN+PSF L I++LV
Sbjct: 279 ISISKFTDISTCLCVGGLPTKTQEAELRLRPDIIIATPGRLIDHIHNSPSFFLDAIDILV 338
Query: 243 LDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
+DEADR+LD+ F +++ EII+ RTRQTMLFSATMTD V+DL+ +SL RPVR+FVD N
Sbjct: 339 IDEADRILDDGFDAELNEIIKHTPRTRQTMLFSATMTDNVDDLIKLSLNRPVRLFVDQNT 398
Query: 303 EVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
++ L QEF+ E +L + R
Sbjct: 399 KLTNRLVQEFIRVRGHKETSRPAILAALCSR 429
>gi|148235819|ref|NP_001089455.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Xenopus laevis]
gi|66910710|gb|AAH97561.1| MGC114699 protein [Xenopus laevis]
Length = 758
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/254 (59%), Positives = 175/254 (68%), Gaps = 40/254 (15%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F EDA +E+ +F MNLSRPLLKAI A+++ PTPIQ A IPV LLG+DIC CAATGT
Sbjct: 170 FSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGT 229
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAFMLP+LERL+YKPR+ TRVLVLVPTRELG+QV+ VTRQLAQFT V L+VGG
Sbjct: 230 GKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGG 289
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM- 258
L+VK QE+ LR PD++IATPGRL+DHLHN PSFSL+ IEVL+LDEADRMLDE+F QM
Sbjct: 290 LDVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMK 349
Query: 259 -------------------KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
E V DL SVSL PVR+FV+
Sbjct: 350 EIIRLCSHQRQTLLFSATMSE--------------------EVKDLASVSLRNPVRIFVN 389
Query: 300 NNHEVALNLRQEFV 313
+N +VA LRQEFV
Sbjct: 390 SNTDVAPFLRQEFV 403
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 224/339 (66%), Gaps = 6/339 (1%)
Query: 1 DDSSDEEGNKEDKEDNEGSEEDDVDAEED-FALPDD--EMKHDNIK-NRQKLIGKKKQKR 56
D++S +EG+++D ED E + D+V+ +ED A D+ E + D+ + + + +
Sbjct: 114 DENSADEGSEQDSEDGEFNGLDEVEDDEDPLATSDEGSEAEDDSAELSAAEDGEDDEDDG 173
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTP 116
L+ + E + E++ F D P EE+SSF MNLSRP++K++ L + PTP
Sbjct: 174 LSASSDGESEEDTQAEKDRKAAFFASDVAPSEEHSSFLSMNLSRPIIKSLTTLGFNTPTP 233
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTREL 174
IQAATIPVALLG+D+ G A TG+GKTAAF++P+LERL+Y+ R + TR LVLVPTREL
Sbjct: 234 IQAATIPVALLGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAATRCLVLVPTREL 293
Query: 175 GVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFS 234
VQ ++V +LA T + L VGGL +K QE+ LR PD+VIATPGRL+DHL N+P+F+
Sbjct: 294 AVQCFEVGTKLAAHTDIRSCLVVGGLSLKAQEASLRTRPDVVIATPGRLIDHLRNSPTFT 353
Query: 235 LSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPV 294
L +++LVLDEADRML++ F+ ++ EII+ C +RQTMLFSATMTD V++LV +SL +PV
Sbjct: 354 LEALDILVLDEADRMLEDGFSDELTEIIKSCPTSRQTMLFSATMTDTVDELVRMSLNKPV 413
Query: 295 RVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
R+FVD A L QEFV E +L + R
Sbjct: 414 RLFVDPKRTTARGLVQEFVRVRAGKEAERSALLAALCKR 452
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 178/228 (78%), Gaps = 2/228 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE++SF MNLSRP++K+I AL + PTPIQAATIPVALLG+DI G A TG+GKTAAF++
Sbjct: 190 EEHTSFLSMNLSRPIIKSITALGFNKPTPIQAATIPVALLGKDIVGNAVTGSGKTAAFII 249
Query: 148 PILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
P+LERLLY+ R + TR LVLVPTRELGVQ ++V +LA T + +L VGGL VK Q
Sbjct: 250 PMLERLLYRDRGKKAAATRCLVLVPTRELGVQCFEVGTKLAAHTDIRFSLVVGGLSVKTQ 309
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
E+ LR PD+VIATPGRL+DHL N+P+F+L +++LVLDEADRML + FA ++ EII+ C
Sbjct: 310 EATLRTRPDVVIATPGRLIDHLRNSPAFTLDALDILVLDEADRMLSDGFADELTEIIKSC 369
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+RQTMLFSATMTD+V++LV +SL +PVR+FVD A L QEFV
Sbjct: 370 PMSRQTMLFSATMTDSVDELVRMSLDKPVRLFVDPKRSTASGLVQEFV 417
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/244 (56%), Positives = 185/244 (75%), Gaps = 3/244 (1%)
Query: 73 ENEGGKEFFE-DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
E E FF+ ++ P E ++SF MNLSRP++K++ L + PTPIQAATIPVALLG+D+
Sbjct: 168 EKERKAAFFDSESGPSEAHTSFLSMNLSRPIIKSLTTLGFTTPTPIQAATIPVALLGKDV 227
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFT 189
G A TG+GKTAAF++P+LERL+Y+ R + TR LVLVPTRELGVQ ++V +LA T
Sbjct: 228 VGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAATRCLVLVPTRELGVQCFEVGTKLAAHT 287
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
+ AL VGGL +K QE+ LR PD+VIATPGRL+DH+ N+P+F+L +++LVLDEADRM
Sbjct: 288 DIRFALVVGGLSIKAQEANLRTRPDVVIATPGRLIDHIRNSPTFTLDALDILVLDEADRM 347
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L++ FA ++ EII+ C +RQTMLFSATMTD+V++LV +SL +PVR+FVD A L
Sbjct: 348 LEDGFADELTEIIKSCPTSRQTMLFSATMTDSVDELVRMSLNKPVRLFVDPKRATARGLL 407
Query: 310 QEFV 313
QEFV
Sbjct: 408 QEFV 411
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/225 (60%), Positives = 179/225 (79%), Gaps = 2/225 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
S+F MNLSRP++K++ +L++ PTPIQAATIPVALLG+DI G A TG+GKTAAFM+PIL
Sbjct: 176 STFLTMNLSRPIMKSLTSLSFHTPTPIQAATIPVALLGKDIVGNAVTGSGKTAAFMIPIL 235
Query: 151 ERLLY--KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
ERLLY K ++ TR LVLVPTREL VQ ++V +LA T ++++L VGGL +K QE+
Sbjct: 236 ERLLYRQKGKNAAATRCLVLVPTRELAVQCFEVGTKLAAHTDIQMSLVVGGLSLKAQEAT 295
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
LR PD+VIATPGRL+DHL N+P+F+L ++VLVLDEADRML + FA +++EI++ C R+
Sbjct: 296 LRSKPDLVIATPGRLIDHLRNSPTFNLDALDVLVLDEADRMLSDGFADELEEIVKSCPRS 355
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQTMLFSATMTD+V++LV +SL +PVR+FVD A L QEFV
Sbjct: 356 RQTMLFSATMTDSVDELVKMSLNKPVRLFVDPKRATAKGLVQEFV 400
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/249 (56%), Positives = 182/249 (73%), Gaps = 7/249 (2%)
Query: 72 EENEGGKE-----FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
EE E KE F + P E ++SF MNLSRP++K+I L + PTPIQAATIPVAL
Sbjct: 159 EETEAQKERKAAYFDSEQGPAEAHTSFLSMNLSRPIIKSITTLGFTTPTPIQAATIPVAL 218
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQ 184
LG+D+ G A TG+GKTAAF++P+LERL+Y+ R + TR L+L PTREL VQ Y+V +
Sbjct: 219 LGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAATRCLILAPTRELAVQCYEVGSK 278
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LA T + AL VGGL VK QE+ LR PD+VIATPGRL+DHL N+P+F+L +++LVLD
Sbjct: 279 LAAHTDIRFALVVGGLSVKAQETNLRTRPDVVIATPGRLIDHLRNSPTFTLDALDILVLD 338
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADRML++ F+ ++ EII C +RQTMLFSATMTD+V++LV +SL +PVR+FVD
Sbjct: 339 EADRMLEDGFSDELTEIITSCPTSRQTMLFSATMTDSVDELVRMSLNKPVRLFVDPKRST 398
Query: 305 ALNLRQEFV 313
A L QEFV
Sbjct: 399 ARGLLQEFV 407
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 177/236 (75%), Gaps = 2/236 (0%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F DAP + +SSF MNLSRP+LKA+ L + PTPIQAATIPV LLG+D+ G A TG+
Sbjct: 203 FASDAPSSDTHSSFLTMNLSRPVLKALTTLGFNTPTPIQAATIPVGLLGKDVVGNAVTGS 262
Query: 140 GKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
GKTAAF++P++ERLLY+ + + TR L+LVPTREL VQ Y+V ++L T ++ L V
Sbjct: 263 GKTAAFIIPMIERLLYRDKGKKAAATRCLILVPTRELAVQCYEVGKKLGTHTDIQFCLIV 322
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL +K QE LR PD+VIATPGRL+DHL N+PSF+L +++LVLDEADRML + FA +
Sbjct: 323 GGLSLKSQEVALRARPDVVIATPGRLIDHLRNSPSFTLDALDILVLDEADRMLSDGFADE 382
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ EII+ C +RQTMLFSATMTD+V++LV +SL +PVR+FVD A L QEFV
Sbjct: 383 LTEIIQSCPTSRQTMLFSATMTDSVDELVKMSLNKPVRLFVDPKRSTARGLVQEFV 438
>gi|384493436|gb|EIE83927.1| hypothetical protein RO3G_08632 [Rhizopus delemar RA 99-880]
Length = 711
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/252 (53%), Positives = 181/252 (71%), Gaps = 2/252 (0%)
Query: 78 KEFFEDAPPV--EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
KE+F D V +++ SF MNLSRP+LK + +L ++ PTPIQ+ TIP+AL+G+DICG A
Sbjct: 201 KEYFADESEVDKQDHISFTSMNLSRPILKGVTSLGFVKPTPIQSQTIPIALMGKDICGGA 260
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
ATG+GKTAAF++PILERLLY+PR +TRVL+L PTREL QV+ + A +T + L
Sbjct: 261 ATGSGKTAAFVIPILERLLYRPRQTPSTRVLILCPTRELAAQVHSAAVKFAAYTDITFCL 320
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGGL +K QE L+ PD+V+ATPGRL+DH+ NT F L E+LV+DEADRML++ FA
Sbjct: 321 CVGGLSLKTQEQELKLKPDVVVATPGRLIDHVRNTSGFHLDACEILVMDEADRMLEDGFA 380
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
++ EI++ C ++RQTMLFSATMTD V+ L+ +SL PVR+FVD +++ A L QEFV
Sbjct: 381 DELGEIVKSCPKSRQTMLFSATMTDNVDQLIRMSLHNPVRLFVDRSNQAASRLIQEFVRI 440
Query: 316 SNIDEVRLYNVL 327
E VL
Sbjct: 441 RQAREADRSAVL 452
>gi|345563744|gb|EGX46729.1| hypothetical protein AOL_s00097g477 [Arthrobotrys oligospora ATCC
24927]
Length = 854
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 176/248 (70%), Gaps = 4/248 (1%)
Query: 70 EYEENEGGKEFF----EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
E EE K F D P S+F QMNLSRP+L+ +G +N+ PT IQ+ TIP+A
Sbjct: 294 ETEETRAAKAAFFATPTDLPTTSLTSTFQQMNLSRPILRGLGHINFTTPTAIQSRTIPIA 353
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
LL RDI G A TG+GKTAA+M+PILERLLY+P+ TRV++L PTREL +QV+ V +L
Sbjct: 354 LLARDIVGGAVTGSGKTAAYMVPILERLLYRPKKVAQTRVVILTPTRELAIQVHAVAVKL 413
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
A FT ++ L+VGGL +K QE+ LR+ PDIVIATPGR +DH+ N+ SF IE+LVLDE
Sbjct: 414 AAFTDIKFTLAVGGLSLKAQEAELRQRPDIVIATPGRFIDHMRNSASFHTDGIEILVLDE 473
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADRML++ FA ++ EI++ ++RQTMLFSATMTD+V+ LV V + +PVR+ VD+
Sbjct: 474 ADRMLEDGFADELDEILKTLPKSRQTMLFSATMTDSVDKLVRVGMQKPVRLLVDSKKSTV 533
Query: 306 LNLRQEFV 313
L QEF+
Sbjct: 534 ATLTQEFI 541
>gi|320162646|gb|EFW39545.1| ATP-dependent RNA helicase DRS1 [Capsaspora owczarzaki ATCC 30864]
Length = 924
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 184/254 (72%), Gaps = 2/254 (0%)
Query: 62 KLKQVEAEEYEENEGGKE-FFEDAPP-VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
K K A E E E K FFE AP + + F +MNLSRPLL+AI +LN+ T IQA
Sbjct: 311 KDKARAARERERKEKLKAAFFEQAPADIISSKQFTEMNLSRPLLRAISSLNFANATDIQA 370
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
ATIP AL+GRD+ CA TG+GKTAAF+LP+LERLLY+ + + +RVLVL PTREL VQ +
Sbjct: 371 ATIPPALMGRDLVACAKTGSGKTAAFLLPVLERLLYRQKTNPASRVLVLSPTRELAVQCH 430
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
+ +LA+FT + ++L GG K Q++ LR PD+++ATPGRL+DHL N+P F L IE
Sbjct: 431 AMGEKLAKFTDIRMSLICGGFSTKRQQAELRAHPDVIVATPGRLIDHLQNSPGFDLEGIE 490
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
VL++DEADR+L+ F ++ EIIR CS +RQTMLFSATMTD V +L+++S+ +P+RVF++
Sbjct: 491 VLIMDEADRLLEMGFKEEVDEIIRQCSVSRQTMLFSATMTDEVENLIALSMNKPLRVFIN 550
Query: 300 NNHEVALNLRQEFV 313
N + A NL QEFV
Sbjct: 551 KNTDTATNLTQEFV 564
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 132/224 (58%), Positives = 171/224 (76%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+SSF MNLSRP+LK + L + PT IQ TIP+ALLG+DI G A TG+GKTAAF++PI
Sbjct: 258 HSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPI 317
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+P+ TRVL+L PTREL +Q + V ++A FT + V L +GGL +K+QE L
Sbjct: 318 LERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQEL 377
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK PDIVIATPGR +DH+ N+ F++ +IE++V+DEADRML++ FA ++ EII+ C ++R
Sbjct: 378 RKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSR 437
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD V+DL+ +SL RPVRVFVDN A L QEFV
Sbjct: 438 QTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFV 481
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/249 (57%), Positives = 180/249 (72%), Gaps = 4/249 (1%)
Query: 69 EEYEENEGGKEFFEDAPPVEENS--SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
+E E++ K F P E + SF MNLSRP+LKA+ ALN+ PTPIQA+TIPVAL
Sbjct: 149 DETAEDKARKAAFFAEPSSHEPAADSFLSMNLSRPILKALTALNFHTPTPIQASTIPVAL 208
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLY--KPRDDQNTRVLVLVPTRELGVQVYQVTRQ 184
LG+DI G A TG+GKTAAF++P+LERLLY K ++ TR ++LVPTREL VQ + V +
Sbjct: 209 LGKDIVGNAVTGSGKTAAFVIPMLERLLYRDKSKNAAATRCVILVPTRELAVQCFDVATK 268
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LA T V L VGGL VK QE+ LR PD+VIATPGRL+DHL N P F L +++LVLD
Sbjct: 269 LAAHTDVRFCLIVGGLSVKAQEASLRLRPDVVIATPGRLIDHLRNAPQFGLDAVDILVLD 328
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADRML + FA ++ EI++ C R RQTMLFSATMTD+V++LV +SL +PVR+FVD
Sbjct: 329 EADRMLSDGFADELAEIVQACPRGRQTMLFSATMTDSVDELVKMSLNKPVRLFVDAKRTT 388
Query: 305 ALNLRQEFV 313
A +L QEFV
Sbjct: 389 ARSLVQEFV 397
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 181/254 (71%), Gaps = 6/254 (2%)
Query: 66 VEAEEYEENEGGKEFFE--DAPPV--EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
E E E E +F D P V + ++SF M+LSRPLLKA+ AL + PTPIQ AT
Sbjct: 156 TEEETQAEKERKAAYFASPDDPSVSGQVHTSFTTMSLSRPLLKALTALGFSTPTPIQVAT 215
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNT--RVLVLVPTRELGVQVY 179
IPVALLG+D+ G A TG+GKTAAFM+P+LERL+Y+ R R +VLVPTRELGVQ
Sbjct: 216 IPVALLGKDVVGNAVTGSGKTAAFMIPVLERLMYRERGKNKAAVRCVVLVPTRELGVQCV 275
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V ++L+ F V ++L VGGL +K QE+ LR PDIVIATPGRL+DHL N+PSF L ++
Sbjct: 276 DVAKKLSAFMDVRISLIVGGLSLKSQEAELRTRPDIVIATPGRLIDHLRNSPSFGLETLD 335
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
VL+LDEADRML + FA ++KEII+ C +RQTMLFSATMTD V+ LV +SL RPV++FVD
Sbjct: 336 VLILDEADRMLSDGFADELKEIIQACPTSRQTMLFSATMTDDVDALVRMSLNRPVKLFVD 395
Query: 300 NNHEVALNLRQEFV 313
A L QEFV
Sbjct: 396 PKRSTARGLIQEFV 409
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 173/222 (77%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF M LSRP+L+ + +LN+ PTPIQ+ TIPVALLG+DI G A TG+GKTAAF++PILE
Sbjct: 232 SFQDMKLSRPILRGLSSLNFEDPTPIQSKTIPVALLGKDIVGAAVTGSGKTAAFVVPILE 291
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL+Y+P+ +RVL++ PTREL +Q + V +++A FT + + L VGGL +KVQE LRK
Sbjct: 292 RLVYRPKKIPTSRVLIICPTRELAMQCHNVAKRIAAFTDITLCLCVGGLSLKVQEQELRK 351
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDI+IATPGR +DH+ N+ FS+ +IE++V+DEADRML++ FA ++ EI++LC ++RQT
Sbjct: 352 RPDIIIATPGRFIDHVRNSQGFSVDNIEIMVIDEADRMLEDGFADELNEIVKLCPKSRQT 411
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATMT+ V+DLV +SL RPVR+FVD A L QEF+
Sbjct: 412 MLFSATMTEKVDDLVRLSLNRPVRIFVDAKKATAKRLVQEFI 453
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 174/224 (77%), Gaps = 2/224 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F QMNLSRP+LKAI +L + PTPIQA+TIPVALLG+DI G A TG+GKTAAFM+P+LE
Sbjct: 175 TFLQMNLSRPILKAISSLGFTKPTPIQASTIPVALLGKDIVGNAVTGSGKTAAFMIPMLE 234
Query: 152 RLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RLLY+ + + TR L+L+PTREL VQ Y+V ++L T ++ L VGGL +K QE+ L
Sbjct: 235 RLLYREKGKRAAATRCLILLPTRELAVQCYEVGKRLGAHTDIQFCLLVGGLSLKAQEAAL 294
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R+ PD+V+ATPGRL+DH+ N+ F+L +++LVLDEADRML E FA ++ EII+ C ++R
Sbjct: 295 RQRPDVVLATPGRLIDHVRNSVGFNLDSLDILVLDEADRMLSEGFADELTEIIKACPKSR 354
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V++L+ +SL +PVR+FVD A L QEFV
Sbjct: 355 QTMLFSATMTDSVDELIKMSLNKPVRLFVDPKRSTARGLIQEFV 398
>gi|255538978|ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 783
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 179/255 (70%), Gaps = 9/255 (3%)
Query: 78 KEFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
K FF A E +SFH ++NLSRPLL+A L Y PTPIQAA IP+AL GRDIC
Sbjct: 133 KSFFASA----EGASFHANSFMEINLSRPLLRACEVLGYTKPTPIQAACIPLALTGRDIC 188
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKTAAF LP LERLL++P+ Q RVL+L PTREL VQV+ + +LAQFT +
Sbjct: 189 GSAITGSGKTAAFALPTLERLLFRPKRVQAIRVLILTPTRELAVQVHSMVEKLAQFTDIR 248
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
L VGGL KVQES LR PDIV+ATPGR++DHL NT S L D+ VL+LDEADR+L+
Sbjct: 249 CCLIVGGLSTKVQESALRSMPDIVVATPGRMIDHLRNTMSVDLDDLAVLILDEADRLLEL 308
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
F++++ E++RLC + RQTMLFSATMT+ +N+L+ +SLT+P+R+ D + + L +E
Sbjct: 309 GFSAEIHELVRLCPKRRQTMLFSATMTEEINELIKLSLTKPLRLSADPSTKRPATLTEEV 368
Query: 313 VSFSNIDEVRLYNVL 327
V + EV VL
Sbjct: 369 VRIRRMREVNQEAVL 383
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 177/235 (75%), Gaps = 2/235 (0%)
Query: 80 FFEDAPP-VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
+F +P + ++SF MNLSRPLL+A+ + + PTPIQAATIPVALLG+D+ G A TG
Sbjct: 174 YFAPSPTDAQVHTSFTSMNLSRPLLRALTSAGFNSPTPIQAATIPVALLGKDVVGGAVTG 233
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKTAAF++PILERLLY+ RD +TRVLVLVPTREL VQ + V +L FT V AL VG
Sbjct: 234 SGKTAAFIIPILERLLYRSRD-AHTRVLVLVPTRELAVQCHAVAEKLGTFTDVRCALIVG 292
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
GL +K QE+ LR PD+V+ATPGRL+DHL N+ SF+L ++VLVLDEADRML + FA ++
Sbjct: 293 GLSLKAQEATLRTRPDLVVATPGRLIDHLRNSRSFALDALDVLVLDEADRMLSDGFADEL 352
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
KEI++ C RQTMLFSATMTD V L+ +SL PVR+FVD + + A L QEFV
Sbjct: 353 KEIVQSCPTGRQTMLFSATMTDDVETLIRLSLRHPVRLFVDPSKQTARGLVQEFV 407
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/244 (55%), Positives = 181/244 (74%), Gaps = 3/244 (1%)
Query: 73 ENEGGKEFFED-APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EN +F+D P E ++SF MNLSRP++KA+ + PTPIQAA +PVALLG+D+
Sbjct: 167 ENLRKAAYFDDETRPSETHASFLTMNLSRPIIKALTTMGLHKPTPIQAAAVPVALLGKDV 226
Query: 132 CGCAATGTGKTAAFMLPILERLLY--KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
G A TG+GKTAAF +PI+ERLLY K ++ TR LV+VPTREL VQ ++V ++A T
Sbjct: 227 VGGAVTGSGKTAAFTIPIIERLLYRDKGKNAAATRCLVVVPTRELAVQCFEVGTRMAGHT 286
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
V L VGGL +K QE+ LR PD++IATPGRL+DHLHN+PSF+L +++LVLDEADRM
Sbjct: 287 DVRFCLVVGGLSLKSQEAALRSRPDVLIATPGRLIDHLHNSPSFTLDALDILVLDEADRM 346
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L++ FA ++ EI++ C +RQTMLFSATMTD+V+ L+ +SLT+PVR+FVD +A L
Sbjct: 347 LEDGFADELTEIVKACPVSRQTMLFSATMTDSVDKLIRLSLTKPVRIFVDAKRSMAKGLV 406
Query: 310 QEFV 313
QEFV
Sbjct: 407 QEFV 410
>gi|313231894|emb|CBY09006.1| unnamed protein product [Oikopleura dioica]
Length = 1234
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/330 (48%), Positives = 215/330 (65%), Gaps = 27/330 (8%)
Query: 9 NKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGK---KKQKRLAKEGKL-- 63
NK D EG + ++ ++ A E K + NR + +G +K+K A+E KL
Sbjct: 550 NKIDTNTPEGRAQ--LEMQKADAFRHREQKREKKGNRVRALGSEQSQKEKAEAREKKLAH 607
Query: 64 ---KQVEAEEYEENE---------GGK--EFFEDA--PPVE-ENSSFHQMNLSRPLLKAI 106
K V+ Y +++ G K EFFE+ P E E SF R LLKA+
Sbjct: 608 VTQKAVKFHRYVKDQDRSSKTKGRGQKKDEFFENWVKPDDEDEKDSFADYGFERKLLKAL 667
Query: 107 GALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYK--PRDDQNTR 164
+ + PTPIQ A+IPVA+ GRDIC CA TG+GKT AF+LPIL+R + + + TR
Sbjct: 668 ANVGWTTPTPIQKASIPVAVTGRDICACATTGSGKTGAFVLPILQRFALRDPSKVESCTR 727
Query: 165 VLVLVPTRELGVQVYQVTRQL-AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRL 223
VLVL+PTREL VQV+ V R+L A+ +V VA + GGL++ Q VLR+ PDI++ATPGRL
Sbjct: 728 VLVLLPTRELCVQVFAVFRKLVAELENVTVACAAGGLDLVQQTQVLRRDPDILVATPGRL 787
Query: 224 LDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVN 283
+DHLHNTP+FSL +IE+LVLDEADRMLDE FASQMKEI+ +TRQTMLFSATMTD V
Sbjct: 788 IDHLHNTPNFSLQEIEILVLDEADRMLDEFFASQMKEILSQTCKTRQTMLFSATMTDTVQ 847
Query: 284 DLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+L V+LT+P+++F+ +N +VA L Q+FV
Sbjct: 848 ELTDVALTKPMKIFISSNTDVADGLEQQFV 877
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 6/241 (2%)
Query: 79 EFFEDA--PPVE-ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
EFFE+ P E E SF R LLKA+ + + PTPIQ A+IPVA+ GRDIC CA
Sbjct: 88 EFFENWVKPDDEDEKDSFADYGFERKLLKALANVGWTTPTPIQKASIPVAVTGRDICACA 147
Query: 136 ATGTGKTAAFMLPILERLLYK--PRDDQNTRVLVLVPTRELGVQVYQVTRQL-AQFTSVE 192
TG+GKT AF+LPIL+R + + + TRVLVL+PTREL VQV+ V R+L A+ +V
Sbjct: 148 TTGSGKTGAFVLPILQRFALRDPSKVESCTRVLVLLPTRELCVQVFAVFRKLVAELENVT 207
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
VA + GGL++ Q VLR+ PDI++ATPGRL+DHLHNTP+FSL +IE+LVLDEADRMLDE
Sbjct: 208 VACAAGGLDLVQQTQVLRRDPDILVATPGRLIDHLHNTPNFSLQEIEILVLDEADRMLDE 267
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
FASQMKEI+ +TRQTMLFSATMTD V +L V+LT+P+++F+ +N +VA L Q+F
Sbjct: 268 FFASQMKEILSQTCKTRQTMLFSATMTDTVQELTDVALTKPMKIFISSNTDVADGLEQQF 327
Query: 313 V 313
V
Sbjct: 328 V 328
>gi|58266632|ref|XP_570472.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110998|ref|XP_775963.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818015|sp|P0CQ93.1|DRS1_CRYNB RecName: Full=ATP-dependent RNA helicase DRS1
gi|338818016|sp|P0CQ92.1|DRS1_CRYNJ RecName: Full=ATP-dependent RNA helicase DRS1
gi|50258629|gb|EAL21316.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226705|gb|AAW43165.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 808
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 185/267 (69%), Gaps = 10/267 (3%)
Query: 80 FFEDAPPVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
FF P + SSF MNLSRPLL+A+ +L + PTPIQA IP+ALLGRDI G A
Sbjct: 208 FFSSDPTTTDPTLPSSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAV 267
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQNT--RVLVLVPTRELGVQVYQVTRQLAQFTSVEV- 193
TG+GKTAAFM+PILERL Y+ R RVLVL PTREL VQ V + LA+ ++V
Sbjct: 268 TGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVR 327
Query: 194 -ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
AL VGGL + Q LR PDI+IATPGRL+DHL NTPSF+LS ++VLV+DEADRML+
Sbjct: 328 FALLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEA 387
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
F +++EII+ C R+RQTMLFSATMTD+V++LV +SL +P+RVFVD A L QEF
Sbjct: 388 GFTDELEEIIKACPRSRQTMLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTARGLTQEF 447
Query: 313 VSFSNIDEVRLYNVLGLM--LLRENCL 337
V + D+ R ++L L +RE C+
Sbjct: 448 VRIRS-DDSRSPSLLALCKRTIREKCI 473
>gi|405120234|gb|AFR95005.1| ATP-dependent RNA helicase DRS1 [Cryptococcus neoformans var.
grubii H99]
Length = 813
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 185/267 (69%), Gaps = 10/267 (3%)
Query: 80 FFEDAPPVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
FF P + SSF MNLSRPLL+A+ +L + PTPIQA IP+ALLGRDI G A
Sbjct: 190 FFSSDPTTTDPTLPSSFAAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAV 249
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQNT--RVLVLVPTRELGVQVYQVTRQLAQFTSVEV- 193
TG+GKTAAFM+PILERL Y+ R RVLVL PTREL VQ V + LA+ ++V
Sbjct: 250 TGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVR 309
Query: 194 -ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
AL VGGL + Q LR PDI+IATPGRL+DHL NTPSF+LS ++VLV+DEADRML+
Sbjct: 310 FALLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEA 369
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
F +++EII+ C R+RQTMLFSATMTD+V++LV +SL +P+RVFVD A L QEF
Sbjct: 370 GFTDELEEIIKACPRSRQTMLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTAKGLTQEF 429
Query: 313 VSFSNIDEVRLYNVLGLM--LLRENCL 337
V + D+ R ++L L +RE C+
Sbjct: 430 VRIRS-DDSRSPSLLALCKRTIREKCI 455
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 172/233 (73%), Gaps = 2/233 (0%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DA + +F MNLSRPLLKA+ L + PTPIQAA IPVALLG+D+ G A TG+GKT
Sbjct: 211 DAATSTSDVTFQSMNLSRPLLKALANLGFEKPTPIQAAAIPVALLGKDVVGGAVTGSGKT 270
Query: 143 AAFMLPILERLLYKPRDDQ--NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
AAF++PILERLL++ R TRV++L PTREL VQ + V ++ FT V +L VGGL
Sbjct: 271 AAFVIPILERLLFRDRGKAAATTRVVILCPTRELAVQCHAVATRIGSFTDVRFSLVVGGL 330
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+K QE+ LR PD+VIATPGRL+DHL N+PSFSL ++VL++DEADRML+E FA+++ E
Sbjct: 331 SLKGQEAELRTRPDVVIATPGRLIDHLRNSPSFSLDMLDVLIMDEADRMLEEGFAAELGE 390
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
II C + RQTMLFSATMTD+V++L+ + L +PVR+FVD A L QEFV
Sbjct: 391 IISACPKQRQTMLFSATMTDSVDELIRMGLNKPVRLFVDPRKSTASGLTQEFV 443
>gi|119494918|ref|XP_001264258.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
gi|142982588|sp|A1D1R8.1|DRS1_NEOFI RecName: Full=ATP-dependent RNA helicase drs1
gi|119412420|gb|EAW22361.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
Length = 819
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 179/252 (71%), Gaps = 7/252 (2%)
Query: 66 VEAEEYEENEGGKEFF----EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
V+AEE E+ K FF + N SF NLSRP+L+ + ++N+ PTPIQ T
Sbjct: 273 VDAEEAEKR---KAFFAPEEKSTAASTSNRSFQDFNLSRPILRGLASVNFTTPTPIQQKT 329
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ Y V
Sbjct: 330 IPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNV 389
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+LA T + VGG ++ QE++L+K PD++IATPGR +DH+ N+PSF++ +E+L
Sbjct: 390 ATKLATHTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEIL 449
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD+V+ L+ V L RPVR+ VD+
Sbjct: 450 VLDEADRMLEDGFADELNEILTTIPQSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSK 509
Query: 302 HEVALNLRQEFV 313
++NL QEFV
Sbjct: 510 KNTSMNLTQEFV 521
>gi|121700981|ref|XP_001268755.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
gi|142982514|sp|A1CNV8.1|DRS1_ASPCL RecName: Full=ATP-dependent RNA helicase drs1
gi|119396898|gb|EAW07329.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
Length = 826
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 191/285 (67%), Gaps = 24/285 (8%)
Query: 33 PDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFF--EDAPPVEEN 90
PDDE+ D+ + G +V+AEE E+ K FF E+ E
Sbjct: 264 PDDEVASDD-----------------ESGAESEVDAEEAEKR---KAFFAPEEKTTEEPT 303
Query: 91 S--SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
S SF NLSRP+L+ + ++N+ PTPIQ TIPVALLG+DI G A TG+GKTAAF++P
Sbjct: 304 SKRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVP 363
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
ILERLL++PR +RV +L+PTREL VQ Y V +LA T V VGG ++ QE++
Sbjct: 364 ILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATHTDVTFCQLVGGFSLREQENI 423
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L+K PD++IATPGR +DH+ N+PSF++ +E+LVLDEADRML++ FA ++ EI+ ++
Sbjct: 424 LKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKS 483
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQTMLFSATMTD+V+ L+ V L RPVR+ VD+ ++NL QEFV
Sbjct: 484 RQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFV 528
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/252 (52%), Positives = 181/252 (71%), Gaps = 7/252 (2%)
Query: 66 VEAEEYEENEGGKEFF---EDAPPVEE-NSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
V+AEE E+ K FF E + V N SF NLSRP+L+ + ++N+ PTPIQ T
Sbjct: 284 VDAEEAEKR---KAFFAPEEKSTAVSTFNRSFQDFNLSRPILRGLASVNFTTPTPIQQKT 340
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ Y V
Sbjct: 341 IPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNV 400
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+LA T + VGG ++ QE++L+K PD++IATPGR +DH+ N+PSF++ +E+L
Sbjct: 401 ATKLATHTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEIL 460
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD+V+ L+ V L RPVR+ VD+
Sbjct: 461 VLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDSK 520
Query: 302 HEVALNLRQEFV 313
++NL QEFV
Sbjct: 521 KNTSMNLTQEFV 532
>gi|321257748|ref|XP_003193695.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317460165|gb|ADV21908.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 790
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 181/253 (71%), Gaps = 7/253 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF MNLSRPLL+A+ +L + PTPIQA IP+ALLGRDI G A TG+GKTAAFM+PIL
Sbjct: 204 TSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPIL 263
Query: 151 ERLLYKPRDDQNT--RVLVLVPTRELGVQVYQVTRQLAQFTSVEV--ALSVGGLEVKVQE 206
ERL Y+ R RVLVL PTREL VQ V + LA+ ++V AL VGGL + Q
Sbjct: 264 ERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQA 323
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
LR PDI+IATPGRL+DHL NTPSF+LS ++VLV+DEADRML+ F +++EII+ C
Sbjct: 324 HTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACP 383
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNV 326
R+RQTMLFSATMTD+V++LV +SL +P+RVFVD A L QEFV + D+ R ++
Sbjct: 384 RSRQTMLFSATMTDSVDELVKLSLDKPIRVFVDPKRNTAKGLTQEFVRIRS-DDSRSPSL 442
Query: 327 LGLM--LLRENCL 337
L L +RE C+
Sbjct: 443 LALCKRTIREKCI 455
>gi|156037652|ref|XP_001586553.1| hypothetical protein SS1G_12540 [Sclerotinia sclerotiorum 1980]
gi|160380650|sp|A7F4L5.1|DRS1_SCLS1 RecName: Full=ATP-dependent RNA helicase drs1
gi|154697948|gb|EDN97686.1| hypothetical protein SS1G_12540 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 801
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/314 (45%), Positives = 207/314 (65%), Gaps = 15/314 (4%)
Query: 3 SSDEEGNKEDKE--DNEGSEEDDVDAEEDFALPDDEMKH-DNIKNRQKLIGKKKQKRLAK 59
S++E G +ED E DNEG+E+DD D + A P H D+ + + + +
Sbjct: 189 SAEESGAEEDSEASDNEGAEDDDSD-NDSVASP---APHPDDAASEASDDDEDIDEDPEE 244
Query: 60 EGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
K + A E + +G K E NS+F M+LSRP+L+ + + + PTPIQ+
Sbjct: 245 AAKREAFFAPEEKPVKGAKP--------ELNSTFQSMSLSRPILRGLATVGFTQPTPIQS 296
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKTAAF++P+LERLLY+P+ +RV +L+PTREL +Q +
Sbjct: 297 KTIPVALLGKDVVGGAVTGSGKTAAFIVPVLERLLYRPKKVPTSRVAILMPTRELAIQCH 356
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA T ++ L+VGGL +KVQE+ LR PD++IATPGR +DH+ N+PSF++ +E
Sbjct: 357 AVATKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSPSFTVDTLE 416
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADRML+ FA ++ EI+ ++RQTMLFSATM+ +V++L+ V L RPVR+ VD
Sbjct: 417 ILVLDEADRMLEAGFADELNEILTTIPKSRQTMLFSATMSSSVDNLIRVGLNRPVRLLVD 476
Query: 300 NNHEVALNLRQEFV 313
+ A L QEF+
Sbjct: 477 SQKSTAGTLTQEFI 490
>gi|392578431|gb|EIW71559.1| hypothetical protein TREMEDRAFT_27480 [Tremella mesenterica DSM
1558]
Length = 786
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/266 (54%), Positives = 185/266 (69%), Gaps = 9/266 (3%)
Query: 80 FFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
FF P + +SF MNLSRPLL+A+ +LN I PTPIQA IP+ALLGRDI G A T
Sbjct: 193 FFAADPTTDPTLPTSFSTMNLSRPLLRALTSLNLITPTPIQARAIPLALLGRDILGSAVT 252
Query: 138 GTGKTAAFMLPILERLLYK--PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV-- 193
G+GKTAAFM+PILERL Y+ R Q RVL+L PTREL VQ + ++L+ + +
Sbjct: 253 GSGKTAAFMVPILERLTYRERGRGGQACRVLILCPTRELAVQCEEFGKKLSTQGGLNIRF 312
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
AL VGGL + Q LR PDI+IATPGRL+DHL NTPSF+LS ++VLV+DEADRML+
Sbjct: 313 ALLVGGLSLNAQAQNLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAG 372
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
F ++ EI+R C R RQTMLFSATMTD+V++LV +SL +P+R+FVD A+ L QEFV
Sbjct: 373 FTDELNEIVRSCPRGRQTMLFSATMTDSVDELVKLSLDKPIRLFVDPKRNTAIGLTQEFV 432
Query: 314 SFSNIDEVRLYNVLGLM--LLRENCL 337
+ D+ R ++L L +RE C+
Sbjct: 433 RIKS-DDTRSPSLLALCKRTVRERCI 457
>gi|225457931|ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
vinifera]
Length = 732
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/259 (53%), Positives = 182/259 (70%), Gaps = 11/259 (4%)
Query: 76 GG--KEFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLG 128
GG K FF A + +SFH ++NLSRPLL+A AL Y PTPIQAA IP+AL G
Sbjct: 107 GGDRKSFFAPA----DGASFHANSFLELNLSRPLLRACEALGYTKPTPIQAACIPIALTG 162
Query: 129 RDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF 188
RDICG A TG+GKTAAF LP LERLL++P+ Q RVLVL PTREL VQV+ + +LAQF
Sbjct: 163 RDICGSAITGSGKTAAFSLPTLERLLFRPKRVQAIRVLVLTPTRELAVQVHSMMEKLAQF 222
Query: 189 TSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADR 248
T + L VGGL K+QE+ LR PD+V+ATPGR++DHL N+ S L D+ VL+LDEADR
Sbjct: 223 TDIRCCLIVGGLSSKMQETALRSMPDVVVATPGRMIDHLRNSMSVDLEDLAVLILDEADR 282
Query: 249 MLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNL 308
+L+ F ++++E++RLC + RQTMLFSATMT+ V++LV +S+T+P+R+ D + + L
Sbjct: 283 LLELGFNAEIRELVRLCPKRRQTMLFSATMTEEVDELVKLSMTKPMRLAADPSTKRPATL 342
Query: 309 RQEFVSFSNIDEVRLYNVL 327
+E V + EV VL
Sbjct: 343 TEEVVRIRRMREVNQEAVL 361
>gi|340959217|gb|EGS20398.1| hypothetical protein CTHT_0022270 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 806
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 128/242 (52%), Positives = 178/242 (73%), Gaps = 8/242 (3%)
Query: 78 KEFFEDAPPVE------ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
KEFF A P E + S+F MNLSRP+L+ + ++ + PTPIQA TIP+AL+G+D+
Sbjct: 266 KEFF--AAPEETETKNGQASTFQSMNLSRPILRGLTSVGFTKPTPIQAQTIPIALMGKDV 323
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKTAAF++PILERLLY+P+ TRV++L PTREL +Q + V +LA +T +
Sbjct: 324 VGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVATKLAAYTDI 383
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ L+VGGL +KVQE+ LR PD+VIATPGR +DH+ N+ SF++ IE+LVLDEADRML+
Sbjct: 384 KFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLE 443
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
+ FA ++ EI++ ++RQTMLFSATMT +V+ L+ V L +P R+ VD+ + A L QE
Sbjct: 444 DGFADELNEILKTLPKSRQTMLFSATMTSSVDKLIRVGLNKPARIMVDSQKKTAGTLTQE 503
Query: 312 FV 313
FV
Sbjct: 504 FV 505
>gi|426201453|gb|EKV51376.1| hypothetical protein AGABI2DRAFT_114110 [Agaricus bisporus var.
bisporus H97]
Length = 754
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 178/238 (74%), Gaps = 4/238 (1%)
Query: 80 FFEDAPPVEENS--SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
FF+ P +++ SF MNLSRPL+KA+ L + PTPIQA+TIPVALLG+D+ G A T
Sbjct: 181 FFDQEIPASKSTHNSFLSMNLSRPLMKAVTNLGFNKPTPIQASTIPVALLGKDVVGNAVT 240
Query: 138 GTGKTAAFMLPILERLLYKPRDDQNT--RVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
G+GKTAAFM+P++ERLL++ + + R LVLVPTREL VQ Y+V +L+ T + + L
Sbjct: 241 GSGKTAAFMIPMIERLLFREKGKKAAAIRCLVLVPTRELAVQCYEVGTKLSIHTDIRLCL 300
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGGL +K QE+ LR PDIVIATPGRL+DH+ N+ SFSL +++LV+DEADR+L E F+
Sbjct: 301 VVGGLSLKSQEADLRSRPDIVIATPGRLIDHIRNSASFSLDALDILVIDEADRILSEGFS 360
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ EII+ C R+RQTMLFSATMTD+V++LV VSL +PVR+FVD A L QEFV
Sbjct: 361 DELTEIIKSCPRSRQTMLFSATMTDSVDELVRVSLEKPVRLFVDPKRTTARGLIQEFV 418
>gi|430811708|emb|CCJ30841.1| unnamed protein product [Pneumocystis jirovecii]
Length = 610
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 177/236 (75%), Gaps = 2/236 (0%)
Query: 80 FFE--DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
FFE D E SF Q+NLSRP+LKA+ ++ + PT IQ+ IP+ALLG+DI G A T
Sbjct: 158 FFEKNDINMQEHVLSFSQLNLSRPILKALESIGFDKPTTIQSKAIPIALLGKDIVGSAVT 217
Query: 138 GTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
G+GKTAAF++P+LERLLY+P+ TRVL+L PTREL +Q Y VT++LA +T ++ +
Sbjct: 218 GSGKTAAFVIPVLERLLYRPKKIAVTRVLILCPTRELAIQCYNVTKKLATYTDIKTCICT 277
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL +K+QE+ LRK PDIVIATPGR +DH+ N+ FS + IE++V+DEADR+LDE F +
Sbjct: 278 GGLSLKIQEAELRKRPDIVIATPGRFIDHVRNSYGFSPNSIEIIVIDEADRILDEGFQDE 337
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ EII++C ++RQT+LFSATMTD V+ L+ +SL +PVR+FVD + +L QEF+
Sbjct: 338 LNEIIKICPKSRQTILFSATMTDKVDQLIRLSLNKPVRLFVDPKNSTVKSLIQEFI 393
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 180/256 (70%), Gaps = 8/256 (3%)
Query: 66 VEAE-EYEENEGGKEFFEDAPPVEENS-------SFHQMNLSRPLLKAIGALNYIYPTPI 117
+E+E + EE K FF E S SF + NLSRP+L+ + A+N+ PTPI
Sbjct: 269 IESEVDAEEEAKRKAFFAPEEQTSEQSAAELSKKSFQEFNLSRPILRGLAAVNFTNPTPI 328
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ
Sbjct: 329 QRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQ 388
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
Y V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++
Sbjct: 389 CYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDT 448
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD+V+ L+ V L RPVR+
Sbjct: 449 LEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLM 508
Query: 298 VDNNHEVALNLRQEFV 313
VD+ ++NL QEFV
Sbjct: 509 VDSKKNTSMNLIQEFV 524
>gi|142982571|sp|P0C2N7.1|DRS1_CHAGB RecName: Full=ATP-dependent RNA helicase DRS1
Length = 795
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 180/261 (68%), Gaps = 8/261 (3%)
Query: 78 KEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
KEFF AP EN SSF M+LSRP+L+ + ++ + PTPIQA TIP+AL+G+D
Sbjct: 257 KEFFA-APEETENVGKKGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKD 315
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
+ G A TG+GKTAAF++PILERLLY+P+ TRV+VL PTREL +Q + V +LA T
Sbjct: 316 VVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTD 375
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
++ L+VGGL +KVQE LR PD+VIATPGR +DH+ N+ SF++ +E+LVLDEADRML
Sbjct: 376 IKFCLAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRML 435
Query: 251 DEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ FA ++ EI+ ++RQTMLFSATMT V+ L+ V L +P R+ VD+ + A+ L Q
Sbjct: 436 EDGFADELNEILTTLPKSRQTMLFSATMTSTVDKLIRVGLNKPARIMVDSQKQTAVTLAQ 495
Query: 311 EFVSFSNIDEVRLYNVLGLML 331
EFV E + LG L
Sbjct: 496 EFVRLRPGREEKRMGYLGPYL 516
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 179/256 (69%), Gaps = 10/256 (3%)
Query: 65 QVEAEEYEENEGGKEFF-------EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPI 117
+V+AEE + K FF EDA SF + NLSRP+L+ + A+N+ PTPI
Sbjct: 268 EVDAEEEAKR---KAFFAPEEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPI 324
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ
Sbjct: 325 QQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQ 384
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
Y V +LA +T + VGG ++ QE+VL+K PD++IATPGR +DH+ N+ SF++
Sbjct: 385 CYNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDT 444
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD+V+ L+ V L RPVR+
Sbjct: 445 LEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLM 504
Query: 298 VDNNHEVALNLRQEFV 313
VD A+ L QEFV
Sbjct: 505 VDTKKNTAVTLVQEFV 520
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 180/256 (70%), Gaps = 8/256 (3%)
Query: 66 VEAE-EYEENEGGKEFFEDAPPVEENS-------SFHQMNLSRPLLKAIGALNYIYPTPI 117
+E+E + EE K FF E S SF + NLSRP+L+ + A+N+ PTPI
Sbjct: 305 IESEVDAEEEAKRKAFFAPEEQTSEQSAAELSKKSFQEFNLSRPILRGLAAVNFTNPTPI 364
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ
Sbjct: 365 QRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQ 424
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
Y V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++
Sbjct: 425 CYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDT 484
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD+V+ L+ V L RPVR+
Sbjct: 485 LEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLM 544
Query: 298 VDNNHEVALNLRQEFV 313
VD+ ++NL QEFV
Sbjct: 545 VDSKKNTSMNLIQEFV 560
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/258 (51%), Positives = 180/258 (69%), Gaps = 14/258 (5%)
Query: 65 QVEAEEYEENEGGKEFFEDAPPVEENS---------SFHQMNLSRPLLKAIGALNYIYPT 115
QV+AEE E+ K FF AP E+ S SF + NLSRP+L+ + +N+ PT
Sbjct: 279 QVDAEEEEKR---KAFF--APEEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPT 333
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQ TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL
Sbjct: 334 PIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELA 393
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
VQ Y V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++
Sbjct: 394 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 453
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD V+ L+ V L RPVR
Sbjct: 454 DTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVR 513
Query: 296 VFVDNNHEVALNLRQEFV 313
+ VD A+ L QEFV
Sbjct: 514 LMVDAKKNTAVTLVQEFV 531
>gi|142982528|sp|A2QAX7.1|DRS1_ASPNC RecName: Full=ATP-dependent RNA helicase drs1
gi|134055839|emb|CAK37361.1| unnamed protein product [Aspergillus niger]
Length = 824
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/258 (51%), Positives = 180/258 (69%), Gaps = 14/258 (5%)
Query: 65 QVEAEEYEENEGGKEFFEDAPPVEENS---------SFHQMNLSRPLLKAIGALNYIYPT 115
QV+AEE E+ K FF AP E+ S SF + NLSRP+L+ + +N+ PT
Sbjct: 279 QVDAEEEEKR---KAFF--APEEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPT 333
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQ TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL
Sbjct: 334 PIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELA 393
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
VQ Y V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++
Sbjct: 394 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 453
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD V+ L+ V L RPVR
Sbjct: 454 DTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVR 513
Query: 296 VFVDNNHEVALNLRQEFV 313
+ VD A+ L QEFV
Sbjct: 514 LMVDAKKNTAVTLVQEFV 531
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/258 (51%), Positives = 180/258 (69%), Gaps = 14/258 (5%)
Query: 65 QVEAEEYEENEGGKEFFEDAPPVEENS---------SFHQMNLSRPLLKAIGALNYIYPT 115
QV+AEE E+ K FF AP E+ S SF + NLSRP+L+ + +N+ PT
Sbjct: 252 QVDAEEEEKR---KAFF--APEEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPT 306
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQ TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL
Sbjct: 307 PIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELA 366
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
VQ Y V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++
Sbjct: 367 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 426
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD V+ L+ V L RPVR
Sbjct: 427 DTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVR 486
Query: 296 VFVDNNHEVALNLRQEFV 313
+ VD A+ L QEFV
Sbjct: 487 LMVDAKKNTAVTLVQEFV 504
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/258 (51%), Positives = 180/258 (69%), Gaps = 14/258 (5%)
Query: 65 QVEAEEYEENEGGKEFFEDAPPVEENS---------SFHQMNLSRPLLKAIGALNYIYPT 115
QV+AEE E+ K FF AP E+ S SF + NLSRP+L+ + +N+ PT
Sbjct: 284 QVDAEEEEKR---KAFF--APEEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPT 338
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQ TIPVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL
Sbjct: 339 PIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELA 398
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
VQ Y V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++
Sbjct: 399 VQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTV 458
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD V+ L+ V L RPVR
Sbjct: 459 DTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVR 518
Query: 296 VFVDNNHEVALNLRQEFV 313
+ VD A+ L QEFV
Sbjct: 519 LMVDAKKNTAVTLVQEFV 536
>gi|115492615|ref|XP_001210935.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
gi|121742543|sp|Q0CZN5.1|DRS1_ASPTN RecName: Full=ATP-dependent RNA helicase drs1
gi|114197795|gb|EAU39495.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
Length = 821
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 176/251 (70%), Gaps = 12/251 (4%)
Query: 72 EENEGGKEFFEDAPPVEENS---------SFHQMNLSRPLLKAIGALNYIYPTPIQAATI 122
EE E K FF P EE + SF + NLSRP+L+ + A+N+ PTPIQ TI
Sbjct: 279 EEQEKRKAFF---APEEEKTKEQADGAQRSFQEFNLSRPILRGLAAVNFTNPTPIQRKTI 335
Query: 123 PVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVT 182
PVALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ Y V
Sbjct: 336 PVALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVA 395
Query: 183 RQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
+LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+LV
Sbjct: 396 TKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILV 455
Query: 243 LDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
LDEADRML++ FA ++ EI+ ++RQTMLFSATMTD V+ L+ V L RPVR+ VD+
Sbjct: 456 LDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVRLMVDSKK 515
Query: 303 EVALNLRQEFV 313
+L L QEFV
Sbjct: 516 NTSLTLVQEFV 526
>gi|449516409|ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 129/236 (54%), Positives = 172/236 (72%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP LE
Sbjct: 136 SFMELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLE 195
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+P+ D+ RVL+L P REL +QV+ + +LAQFT + L VGGL K QE+ LR
Sbjct: 196 RLLYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRS 255
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD+V+ATPGR++DHL N+ S L D+ VL+LDEADR+L+ F+++++E++RLC + RQT
Sbjct: 256 MPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQT 315
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
MLFSATMT+ VN+L+ +SLT+P+R+ D + L +E V + EV VL
Sbjct: 316 MLFSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVL 371
>gi|449460106|ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 129/236 (54%), Positives = 172/236 (72%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP LE
Sbjct: 136 SFMELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLE 195
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+P+ D+ RVL+L P REL +QV+ + +LAQFT + L VGGL K QE+ LR
Sbjct: 196 RLLYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRS 255
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD+V+ATPGR++DHL N+ S L D+ VL+LDEADR+L+ F+++++E++RLC + RQT
Sbjct: 256 MPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQT 315
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
MLFSATMT+ VN+L+ +SLT+P+R+ D + L +E V + EV VL
Sbjct: 316 MLFSATMTEEVNELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVL 371
>gi|116208202|ref|XP_001229910.1| hypothetical protein CHGG_03394 [Chaetomium globosum CBS 148.51]
gi|88183991|gb|EAQ91459.1| hypothetical protein CHGG_03394 [Chaetomium globosum CBS 148.51]
Length = 1453
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 180/261 (68%), Gaps = 8/261 (3%)
Query: 78 KEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
KEFF AP EN SSF M+LSRP+L+ + ++ + PTPIQA TIP+AL+G+D
Sbjct: 257 KEFFA-APEETENVGKKGGLSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKD 315
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
+ G A TG+GKTAAF++PILERLLY+P+ TRV+VL PTREL +Q + V +LA T
Sbjct: 316 VVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTD 375
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
++ L+VGGL +KVQE LR PD+VIATPGR +DH+ N+ SF++ +E+LVLDEADRML
Sbjct: 376 IKFCLAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRML 435
Query: 251 DEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ FA ++ EI+ ++RQTMLFSATMT V+ L+ V L +P R+ VD+ + A+ L Q
Sbjct: 436 EDGFADELNEILTTLPKSRQTMLFSATMTSTVDKLIRVGLNKPARIMVDSQKQTAVTLAQ 495
Query: 311 EFVSFSNIDEVRLYNVLGLML 331
EFV E + LG L
Sbjct: 496 EFVRLRPGREEKRMGYLGPYL 516
>gi|409083507|gb|EKM83864.1| hypothetical protein AGABI1DRAFT_117335, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 701
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 207/320 (64%), Gaps = 22/320 (6%)
Query: 1 DDSSDEEGNKEDKEDNEGSEEDD---VDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRL 57
D + DE E+ E+ SE DD + +D ++EM + +++ + + +
Sbjct: 114 DQAEDEADKAENGEEISESESDDDPLATSGDDSDNEEEEMDSEKVESSGDDDDSEDETQA 173
Query: 58 AKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENS--SFHQMNLSRPLLKAIGALNYIYPT 115
K+ K FF+ P +N+ SF MNLSRPL+KA+ L + PT
Sbjct: 174 EKDRKTA---------------FFDQEIPASKNTHNSFLSMNLSRPLMKAVTNLGFNKPT 218
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNT--RVLVLVPTRE 173
PIQA+TIPVALLG+D+ G A TG+GKTAAFM+P++ERLL++ + + R LVLVPTRE
Sbjct: 219 PIQASTIPVALLGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGKKAAAIRCLVLVPTRE 278
Query: 174 LGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSF 233
L VQ Y+V +L+ T + + L VGGL +K QE+ LR PDIVIATPGRL+DH+ N+ SF
Sbjct: 279 LAVQCYEVGTKLSIHTDIRLCLVVGGLSLKSQEADLRSRPDIVIATPGRLIDHIRNSASF 338
Query: 234 SLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRP 293
SL +++LV+DEADR+L E F+ ++ EII+ C R+RQTMLFSATMTD+V++LV VSL +P
Sbjct: 339 SLDALDILVIDEADRILSEGFSDELTEIIKSCPRSRQTMLFSATMTDSVDELVRVSLEKP 398
Query: 294 VRVFVDNNHEVALNLRQEFV 313
VR+FVD A L QEFV
Sbjct: 399 VRLFVDPKRTTARGLIQEFV 418
>gi|407919354|gb|EKG12604.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 791
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 182/272 (66%), Gaps = 11/272 (4%)
Query: 67 EAEEYE---ENEGGKEFF--------EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPT 115
+AEE E E E K FF P + SF M+LSRP+LK + A+ + PT
Sbjct: 240 DAEEQEDPVEAERRKAFFAPEENIDGSKPPAAKGKGSFQHMSLSRPILKGLAAVGFSEPT 299
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQA TIPVALLG+D+ G A TG+GKTAAF++PILERLLY+P+ TRV +L+PTREL
Sbjct: 300 PIQAKTIPVALLGKDVVGGAVTGSGKTAAFVIPILERLLYRPKKVPTTRVAILMPTRELA 359
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
VQ + V+++LA FT + A VGG ++ QE++L++ PD+VIATPGR +DH+ N+ SF++
Sbjct: 360 VQCFNVSKKLAAFTDITFAQIVGGFSLREQENILKQRPDVVIATPGRFIDHMRNSASFAV 419
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMTD V+ L+ V L RPVR
Sbjct: 420 DTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDTVDKLIRVGLNRPVR 479
Query: 296 VFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
+ VD L QEFV E + VL
Sbjct: 480 LMVDAKKATVSGLVQEFVRLRPGKEEKKLAVL 511
>gi|67517117|ref|XP_658442.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
gi|40746512|gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
Length = 1676
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 174/249 (69%), Gaps = 7/249 (2%)
Query: 72 EENEGGKEFF-------EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPV 124
EE K FF EDA SF + NLSRP+L+ + A+N+ PTPIQ TIPV
Sbjct: 764 EEEAKRKAFFAPEEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPV 823
Query: 125 ALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQ 184
ALLG+DI G A TG+GKTAAF++PILERLL++PR +RV +L+PTREL VQ Y V +
Sbjct: 824 ALLGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATK 883
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LA +T + VGG ++ QE+VL+K PD++IATPGR +DH+ N+ SF++ +E+LVLD
Sbjct: 884 LATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLD 943
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADRML++ FA ++ EI+ ++RQTMLFSATMTD+V+ L+ V L RPVR+ VD
Sbjct: 944 EADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNT 1003
Query: 305 ALNLRQEFV 313
A+ L QEFV
Sbjct: 1004 AVTLVQEFV 1012
>gi|171685610|ref|XP_001907746.1| hypothetical protein [Podospora anserina S mat+]
gi|170942766|emb|CAP68419.1| unnamed protein product [Podospora anserina S mat+]
Length = 798
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 177/240 (73%), Gaps = 4/240 (1%)
Query: 78 KEFFEDAPPVEE----NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
KEFF D V++ +SSF +M+LSRP+LK + ++ + PTPIQ+ TIP+AL+G+D+ G
Sbjct: 256 KEFFADEDDVKQEKGVHSSFLEMSLSRPILKGLNSVGFTKPTPIQSKTIPIALMGKDVVG 315
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
A TG+GKT AF++PILERLLY+ + TRV++L PTREL +Q + V +LA T ++
Sbjct: 316 GAVTGSGKTGAFLVPILERLLYRSKKVATTRVVILAPTRELAIQCHAVGVKLASHTDIKF 375
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
L+VGGL +KVQE LR PD+VIATPGR +DH+ N+ SF++ +E+LVLDEADRML++
Sbjct: 376 CLAVGGLSLKVQEQELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDG 435
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
FA ++ EI+ ++RQTMLFSATMT +V+ L+ L +PVR+ VD+ + A NLRQEFV
Sbjct: 436 FADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIQVDSQKKTASNLRQEFV 495
>gi|401885525|gb|EJT49639.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
gi|406694842|gb|EKC98161.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 804
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/243 (56%), Positives = 171/243 (70%), Gaps = 9/243 (3%)
Query: 80 FFEDAPPVEENSS-----FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGC 134
FF P ++ S F MNLSRPLL+A+ +L + PTPIQ+ +P+ALLGRDI G
Sbjct: 192 FFSADPTADKEKSDLPTTFASMNLSRPLLRALSSLGFNAPTPIQSRAVPLALLGRDILGS 251
Query: 135 AATGTGKTAAFMLPILERLLYKPRDDQNT--RVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
A TG+GKTAAFM+PILERL Y+ R RVLVL PTREL VQ QV + LA+ ++
Sbjct: 252 AVTGSGKTAAFMIPILERLQYRDRGKGGAACRVLVLCPTRELAVQCEQVGKALAERGGLD 311
Query: 193 V--ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
V AL VGGL + Q LR PDI+IATPGRL+DHL NTPSF+L +++LV+DEADRML
Sbjct: 312 VRFALLVGGLSLNAQAHALRTLPDILIATPGRLIDHLTNTPSFTLGALDILVIDEADRML 371
Query: 251 DEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ F +++EI+R C R RQTMLFSATMTD+V++LV +SL RPVRVFVD A L Q
Sbjct: 372 EAGFTDELEEIVRQCPRGRQTMLFSATMTDSVDELVKLSLDRPVRVFVDKERNTAAGLTQ 431
Query: 311 EFV 313
EFV
Sbjct: 432 EFV 434
>gi|164428960|ref|XP_001728501.1| hypothetical protein NCU11175 [Neurospora crassa OR74A]
gi|157072353|gb|EDO65410.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 857
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 208/312 (66%), Gaps = 14/312 (4%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEG 61
D DE+ ED E +G +ED+ DA +D ++ D++++ + +E
Sbjct: 218 DGEDEDSEGEDGE-KKGEDEDEGDASDDDSVATAVEHPDDVQSSDDE----EGIDEEEEA 272
Query: 62 KLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
K+K+ A E EEN+ K+ E SSF +M+LSRP+L+ + ++ + PTPIQA T
Sbjct: 273 KMKEFFAPE-EENQPKKKG--------EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKT 323
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP++L+G+D+ G A TG+GKTAAF++PILERLLY+P+ TRV++L PTREL +Q + V
Sbjct: 324 IPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAV 383
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+LA T ++ L+VGGL +KVQE+ LR PD+VIATPGR +DH+ N+ SF++ IE+L
Sbjct: 384 AVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEIL 443
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ L +PVR+ D+
Sbjct: 444 VLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQ 503
Query: 302 HEVALNLRQEFV 313
+ A L QEFV
Sbjct: 504 KKTAGTLVQEFV 515
>gi|142982611|sp|P0C2N8.1|DRS1_NEUCR RecName: Full=ATP-dependent RNA helicase drs-1
Length = 829
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 208/312 (66%), Gaps = 14/312 (4%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEG 61
D DE+ ED E +G +ED+ DA +D ++ D++++ + +E
Sbjct: 218 DGEDEDSEGEDGE-KKGEDEDEGDASDDDSVATAVEHPDDVQSSDDE----EGIDEEEEA 272
Query: 62 KLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
K+K+ A E EEN+ K+ E SSF +M+LSRP+L+ + ++ + PTPIQA T
Sbjct: 273 KMKEFFAPE-EENQPKKKG--------EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKT 323
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP++L+G+D+ G A TG+GKTAAF++PILERLLY+P+ TRV++L PTREL +Q + V
Sbjct: 324 IPISLMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAV 383
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+LA T ++ L+VGGL +KVQE+ LR PD+VIATPGR +DH+ N+ SF++ IE+L
Sbjct: 384 AVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEIL 443
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ L +PVR+ D+
Sbjct: 444 VLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQ 503
Query: 302 HEVALNLRQEFV 313
+ A L QEFV
Sbjct: 504 KKTAGTLVQEFV 515
>gi|358392056|gb|EHK41460.1| hypothetical protein TRIATDRAFT_162817, partial [Trichoderma
atroviride IMI 206040]
Length = 760
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 167/223 (74%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF M+LSRP+++ I A+ + PTPIQA TIP+AL+G+D+ G A TG+GKTAAF+LPIL
Sbjct: 245 SSFQVMSLSRPIMRGITAVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVLPIL 304
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ TRV++L PTREL +Q + V +LA T ++ L+VGGL +K QE+ LR
Sbjct: 305 ERLLYRPKKIPTTRVVILTPTRELAIQCHAVATKLAAHTDIKFTLAVGGLSLKAQETELR 364
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD++IATPGR +DH+ N+ SFS+ +E+LVLDEADRML++ FA ++ EI+ ++RQ
Sbjct: 365 LRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQ 424
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT V+ L+ V L +PVRV VD+ + A L QEFV
Sbjct: 425 TMLFSATMTSTVDRLIKVGLNKPVRVMVDSQKKTAGTLIQEFV 467
>gi|255711296|ref|XP_002551931.1| KLTH0B03278p [Lachancea thermotolerans]
gi|238933309|emb|CAR21493.1| KLTH0B03278p [Lachancea thermotolerans CBS 6340]
Length = 739
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 209/326 (64%), Gaps = 26/326 (7%)
Query: 3 SSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGK 62
S+ EG+ D E +E ++D E D + ++ L+ A G
Sbjct: 150 SATHEGDATDSEGDESGVDEDSGVESD----------KQTEGQEALM-------TAGNGS 192
Query: 63 LKQVEAEEYEENEGGKEFF---EDAPPVEE--NSSFHQMNLSRPLLKAIGALNYIYPTPI 117
+ +E + E EF+ E++ ++ +++F+ ++LSRP+LK +GALNY+ P+PI
Sbjct: 193 VSDIED---DSEEAKAEFYALEEESTEAKKTVHTNFNSLSLSRPVLKGLGALNYVKPSPI 249
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q+ATIP+ALLG+DI A TG+GKTAA+M+PI+ERLLYKP +TRV+VL PTREL +Q
Sbjct: 250 QSATIPIALLGKDIIAGAVTGSGKTAAYMIPIIERLLYKPAQIASTRVIVLTPTRELAIQ 309
Query: 178 VYQVTRQLAQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
V V +LA+F + + L+VGGL ++ QE LR PDIVIATPGRL+DH+ N+ SF++
Sbjct: 310 VSDVGAKLAKFVNGISFGLAVGGLNLRQQEQTLRSRPDIVIATPGRLIDHIRNSASFNVD 369
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+E+LV+DEADRML+E F ++ EI+ L RQT+LFSATM +N L+S+SL +PV++
Sbjct: 370 SVEILVIDEADRMLEEGFQDELNEIMSLIPSKRQTLLFSATMNSKINQLISLSLKKPVKI 429
Query: 297 FVDNNHEVALNLRQEFVSFSNIDEVR 322
+D + A L QEFV DE++
Sbjct: 430 MIDPPRQAAAKLTQEFVRVRKRDELK 455
>gi|365759503|gb|EHN01286.1| Drs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 737
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 193/282 (68%), Gaps = 14/282 (4%)
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSS-------FHQMNLSRPLLKAIGAL 109
L K GK +V AEE + E +F+ AP E N + F+ ++LSRP+LK + L
Sbjct: 178 LEKTGKDDEV-AEEDDSEEAKADFY--APETEGNEAKKQMYDNFNSLSLSRPVLKGLANL 234
Query: 110 NYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLV 169
Y+ P+PIQ+ATIP+ALLG+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+
Sbjct: 235 GYVMPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLL 294
Query: 170 PTRELGVQVYQVTRQLAQFT-SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
PTREL +QV V +Q+A+F S+ L+VGGL ++ QE +L+ PDIVIATPGR +DH+
Sbjct: 295 PTRELALQVADVGKQIARFVPSITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIR 354
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
N+ SF++ +E+LV+DEADRML+E F ++ EI+ L +RQ +LFSATM + LVS+
Sbjct: 355 NSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSSRQNLLFSATMNSKIKSLVSL 414
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LYNVL 327
SL RPVR+ +D + A L QEFV D ++ ++N++
Sbjct: 415 SLKRPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALIFNLI 456
>gi|378728301|gb|EHY54760.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 813
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 163/223 (73%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF Q +LSRP+LKA+ AL++ PTPIQA IPVAL G D+ G A TG+GKTAAF+LPIL
Sbjct: 286 SSFQQFSLSRPILKALAALSFTAPTPIQARAIPVALQGLDVVGSAVTGSGKTAAFLLPIL 345
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+PR TRV +L+PTREL VQ Y V LA+FT + A VGG ++ QE++L+
Sbjct: 346 ERLLYRPRKVPTTRVAILMPTRELAVQCYNVATALARFTDITFAQVVGGFPLREQEAILK 405
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K PD+VIATPGR +DH+ N+ SF + +IE+LVLDEADRML+ F ++ EI++ + RQ
Sbjct: 406 KRPDVVIATPGRFIDHMRNSASFVVENIEILVLDEADRMLETGFEDELNEILKTIPKGRQ 465
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMTD+V+ LV V + RPVR+ VD L QEFV
Sbjct: 466 TMLFSATMTDSVDKLVRVGMNRPVRLSVDAKKSTVSGLVQEFV 508
>gi|302833349|ref|XP_002948238.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
gi|300266458|gb|EFJ50645.1| hypothetical protein VOLCADRAFT_80160 [Volvox carteri f.
nagariensis]
Length = 836
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 139/256 (54%), Positives = 175/256 (68%), Gaps = 3/256 (1%)
Query: 64 KQVEAEEYEENEGGKEFFEDAPPVEE--NSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
KQ++ + + G F+ D P + +SSF +NLSRPLLKA+ AL Y PTPIQAA
Sbjct: 146 KQLQGRQQNGGKAG-SFYSDTPEGTKFSSSSFADLNLSRPLLKAVEALGYKTPTPIQAAC 204
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP+AL GRDICG A TG+GKTAAF LP LERLL++PR T VLVL PTREL VQ++ +
Sbjct: 205 IPLALAGRDICGSAVTGSGKTAAFALPFLERLLHRPRGLAATYVLVLTPTRELAVQIHSM 264
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+LAQFT V VAL VGGL + VQ + LRK P++V+ATPGRL+DHL N+ S L D+ VL
Sbjct: 265 IEKLAQFTDVTVALIVGGLSLSVQAATLRKLPEVVVATPGRLIDHLRNSQSVGLEDLAVL 324
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADR+L+ F ++ E++R + RQTMLFSAT +D V DLVS+SL +PVR+ D
Sbjct: 325 VLDEADRLLEMGFRDEVMEVVRCAPKKRQTMLFSATFSDQVRDLVSLSLKQPVRLAADAA 384
Query: 302 HEVALNLRQEFVSFSN 317
L QE V
Sbjct: 385 RAAPKLLTQEIVRLKG 400
>gi|224083077|ref|XP_002306942.1| predicted protein [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/266 (52%), Positives = 182/266 (68%), Gaps = 9/266 (3%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAAT 121
E +E E K FF AP E +SFH ++NLSRPLL+A AL Y PTPIQAA
Sbjct: 111 EGDEDTNVEERKSFF--AP--SEGTSFHANSFMELNLSRPLLRACEALGYTKPTPIQAAC 166
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP+AL GRDICG A TG+GKTAAF LP LERLL++P+ RVL+L PTREL VQV+ +
Sbjct: 167 IPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRILAIRVLILTPTRELAVQVHSM 226
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
++AQFT + L VGGL KVQE+ LR PDIV+ATPGR++DHL N+ S L D+ VL
Sbjct: 227 IEKIAQFTDIRCCLVVGGLSTKVQEASLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVL 286
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
+LDEADR+L+ F +++ E++RLC + RQTMLFSATMT+ V+ L+ +SLT+P+R+ D +
Sbjct: 287 ILDEADRLLELGFNAEIHELVRLCPKRRQTMLFSATMTEEVDMLIKLSLTKPLRLSADPS 346
Query: 302 HEVALNLRQEFVSFSNIDEVRLYNVL 327
+ L +E + + EV VL
Sbjct: 347 AKRPAALTEEVLRLRRMREVNQEAVL 372
>gi|401840824|gb|EJT43489.1| DRS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 758
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 193/282 (68%), Gaps = 14/282 (4%)
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSS-------FHQMNLSRPLLKAIGAL 109
L K GK +V AEE + E +F+ AP E N + F+ ++LSRP+LK + L
Sbjct: 199 LEKTGKDDEV-AEEDDSEEAKADFY--APETEGNEAKKQMYDNFNSLSLSRPVLKGLANL 255
Query: 110 NYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLV 169
Y+ P+PIQ+ATIP+ALLG+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+
Sbjct: 256 GYVTPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLL 315
Query: 170 PTRELGVQVYQVTRQLAQFT-SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
PTREL +QV V +Q+A+F S+ L+VGGL ++ QE +L+ PDIVIATPGR +DH+
Sbjct: 316 PTRELALQVADVGKQIARFVPSITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIR 375
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
N+ SF++ +E+LV+DEADRML+E F ++ EI+ L +RQ +LFSATM + LVS+
Sbjct: 376 NSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSSRQNLLFSATMNSKIKSLVSL 435
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LYNVL 327
SL RPVR+ +D + A L QEFV D ++ ++N++
Sbjct: 436 SLKRPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALIFNLI 477
>gi|440636791|gb|ELR06710.1| hypothetical protein GMDG_00327 [Geomyces destructans 20631-21]
Length = 787
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 165/222 (74%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF M+LSRP+ + + A + PTPIQA TIPVALLG+D+ G A TG+GKTAAF++P+LE
Sbjct: 264 SFQNMSLSRPIHRGLAACGFSAPTPIQAKTIPVALLGKDVVGGAVTGSGKTAAFIVPVLE 323
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+P+ +RV +L+PTREL +Q + V +LA +T ++ L+VGGL +K+QE+ LR
Sbjct: 324 RLLYRPKKVPTSRVAILMPTRELAIQCHAVATKLASYTDIKFCLAVGGLSLKIQEAELRL 383
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDI+IATPGR +DH+ N+PSF++ +E+LVLDEADRML++ FA ++ EI+ ++RQT
Sbjct: 384 RPDIIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQT 443
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATMT +V+ L+ V L RPVR+ VD L QEFV
Sbjct: 444 MLFSATMTSSVDKLIRVGLNRPVRLMVDAQRSTVTTLVQEFV 485
>gi|340518289|gb|EGR48530.1| predicted protein [Trichoderma reesei QM6a]
Length = 787
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 165/223 (73%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF M+LSRP+L+ I + + PTPIQA TIP+AL+G+D+ G A TG+GKTAAF+LPIL
Sbjct: 251 SSFQAMSLSRPILRGITTVGFTKPTPIQAKTIPIALMGKDLVGGAVTGSGKTAAFVLPIL 310
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ TRV++L PTREL +Q + V +LA T ++ L+VGGL +K QE LR
Sbjct: 311 ERLLYRPKKIPTTRVVILTPTRELAIQCHAVATKLAAHTDIKFTLAVGGLSLKAQEVELR 370
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD++IATPGR +DH+ N+ SFS+ +E+LVLDEADRML++ FA ++ EI+ ++RQ
Sbjct: 371 LRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQ 430
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT V+ L+ V L +PVRV VD+ + A L QEFV
Sbjct: 431 TMLFSATMTSTVDRLIKVGLNKPVRVMVDSQKKTAGTLTQEFV 473
>gi|218186850|gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
Length = 802
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/260 (51%), Positives = 179/260 (68%), Gaps = 9/260 (3%)
Query: 79 EFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+FF + E +SFH ++NLSRPLL+A AL Y PTPIQAA IP+AL GRDICG
Sbjct: 181 KFFASS----EGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICG 236
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
A TG+GKTAAF LP+LERLL++P+ RVL+L PTREL V+ + +LAQFT +
Sbjct: 237 SAITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAPVHSMIEKLAQFTDIRC 296
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
L VGGL KVQE LR PDIV+ATPGR++DHL N+ S L D+ +L+LDEADR+L+
Sbjct: 297 CLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELG 356
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
F+++++E+IR+C R RQTMLFSATMT+ +N+LV++SL +PVR+ D + + L +E V
Sbjct: 357 FSAEIQELIRMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVV 416
Query: 314 SFSNIDEVRLYNVLGLMLLR 333
E VL + L+
Sbjct: 417 RIRRAREANQEAVLLALCLK 436
>gi|336469774|gb|EGO57936.1| hypothetical protein NEUTE1DRAFT_81992 [Neurospora tetrasperma FGSC
2508]
Length = 830
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/244 (51%), Positives = 176/244 (72%), Gaps = 11/244 (4%)
Query: 78 KEFFEDAPPVEEN--------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
KEFF P EEN +SF +M+LSRP+L+ + ++ + PTPIQA TIP++L+G+
Sbjct: 276 KEFF---APEEENQPKKKGEMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGK 332
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
D+ G A TG+GKTAAF++PILERLLY+P+ TRV++L PTREL +Q + V +LA T
Sbjct: 333 DVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHT 392
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
++ L+VGGL +KVQE+ LR PD+VIATPGR +DH+ N+ SF++ IE+LVLDEADRM
Sbjct: 393 DIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRM 452
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ L +PVR+ D+ + A L
Sbjct: 453 LEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLV 512
Query: 310 QEFV 313
QEFV
Sbjct: 513 QEFV 516
>gi|367028222|ref|XP_003663395.1| hypothetical protein MYCTH_2118610 [Myceliophthora thermophila ATCC
42464]
gi|347010664|gb|AEO58150.1| hypothetical protein MYCTH_2118610 [Myceliophthora thermophila ATCC
42464]
Length = 1400
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/242 (52%), Positives = 172/242 (71%), Gaps = 6/242 (2%)
Query: 78 KEFF------EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
KEFF E A SSF M+LSRP+L+ + ++ + PTPIQA TIP+AL+G+D+
Sbjct: 267 KEFFAAPEETEKATKKGGPSSFQSMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDV 326
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKTAAF++PILERLLY+P+ TRV++L PTREL +Q + V +LA T +
Sbjct: 327 VGGAVTGSGKTAAFIVPILERLLYRPKKVPTTRVVILTPTRELAIQCHSVATKLASHTDI 386
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ L+VGGL +KVQE LR PD+VIATPGR +DH+ N+ SF++ +E+LVLDEADRML+
Sbjct: 387 KFCLAVGGLSLKVQEGELRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLE 446
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
+ FA ++ EI+ ++RQTMLFSATMT V+ L+ V L +P R+ VD+ + A L QE
Sbjct: 447 DGFADELNEILTTLPKSRQTMLFSATMTSTVDKLIRVGLNKPARIMVDSQKQTAGTLTQE 506
Query: 312 FV 313
FV
Sbjct: 507 FV 508
>gi|171656|gb|AAA34666.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
Length = 722
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 187 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 237
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 238 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 297
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 298 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 357
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 358 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 417
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 418 KLTQEFVRIRKRDHLKPALLFNLI 441
>gi|349579719|dbj|GAA24880.1| K7_Drs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 756
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 221 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 271
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 272 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 331
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 332 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 391
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 392 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 451
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 452 KLTQEFVRIRKRDHLKPALLFNLI 475
>gi|154316321|ref|XP_001557482.1| hypothetical protein BC1G_03746 [Botryotinia fuckeliana B05.10]
gi|160380649|sp|A6RUH2.1|DRS1_BOTFB RecName: Full=ATP-dependent RNA helicase drs1
gi|347828004|emb|CCD43701.1| hypothetical protein [Botryotinia fuckeliana]
Length = 801
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 170/226 (75%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E N++F M+LSRP+L+ + + + PTPIQ+ TIPVALLG+D+ G A TG+GKTAAF++
Sbjct: 265 ELNTTFQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVV 324
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+LERLLY+P+ +RV +L+PTREL +Q + V +LA T ++ L+VGGL +KVQE+
Sbjct: 325 PVLERLLYRPKKVPTSRVAILMPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQEA 384
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LR PD++IATPGR +DH+ N+PSF++ +E+LVLDEADRML+ FA ++ EI+ +
Sbjct: 385 ELRLRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIPK 444
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+RQTMLFSATM+ +V++L+ V L RPVR+ VD+ A L QEF+
Sbjct: 445 SRQTMLFSATMSSSVDNLIRVGLNRPVRLLVDSQKSTAGTLVQEFI 490
>gi|350290558|gb|EGZ71772.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 865
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/244 (51%), Positives = 176/244 (72%), Gaps = 11/244 (4%)
Query: 78 KEFFEDAPPVEEN--------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
KEFF P EEN +SF +M+LSRP+L+ + ++ + PTPIQA TIP++L+G+
Sbjct: 276 KEFF---APEEENQPKKKGEMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGK 332
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
D+ G A TG+GKTAAF++PILERLLY+P+ TRV++L PTREL +Q + V +LA T
Sbjct: 333 DVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHT 392
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
++ L+VGGL +KVQE+ LR PD+VIATPGR +DH+ N+ SF++ IE+LVLDEADRM
Sbjct: 393 DIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRM 452
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ L +PVR+ D+ + A L
Sbjct: 453 LEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLV 512
Query: 310 QEFV 313
QEFV
Sbjct: 513 QEFV 516
>gi|392297967|gb|EIW09066.1| Drs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 748
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 213 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 263
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 264 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 323
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 324 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 383
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 384 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 443
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 444 KLTQEFVRIRKRDHLKPALLFNLI 467
>gi|323303947|gb|EGA57727.1| Drs1p [Saccharomyces cerevisiae FostersB]
Length = 755
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 220 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 270
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 271 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 330
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 331 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 390
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 391 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 450
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 451 KLTQEFVRIRKRDHLKPALLFNLI 474
>gi|259147982|emb|CAY81231.1| Drs1p [Saccharomyces cerevisiae EC1118]
Length = 754
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 219 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 269
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 270 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 329
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 330 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 389
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 390 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 449
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 450 KLTQEFVRIRKRDHLKPALLFNLI 473
>gi|256272311|gb|EEU07295.1| Drs1p [Saccharomyces cerevisiae JAY291]
Length = 751
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 216 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 266
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 267 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 326
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 327 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 386
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 387 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 446
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 447 KLTQEFVRIRKRDHLKPALLFNLI 470
>gi|160380652|sp|A7A0P8.1|DRS1_YEAS7 RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|151941161|gb|EDN59539.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406035|gb|EDV09302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207343227|gb|EDZ70754.1| YLL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 754
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 219 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 269
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 270 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 329
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 330 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 389
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 390 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 449
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 450 KLTQEFVRIRKRDHLKPALLFNLI 473
>gi|6323021|ref|NP_013093.1| Drs1p [Saccharomyces cerevisiae S288c]
gi|1706521|sp|P32892.2|DRS1_YEAST RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|1360171|emb|CAA97452.1| DRS1 [Saccharomyces cerevisiae]
gi|1495215|emb|CAA62783.1| L1345/DRS1 protein [Saccharomyces cerevisiae]
gi|285813414|tpg|DAA09310.1| TPA: Drs1p [Saccharomyces cerevisiae S288c]
Length = 752
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 184/264 (69%), Gaps = 13/264 (4%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A E E +E K+ +E+ F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALL
Sbjct: 217 APETEGDEAKKQMYEN---------FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL 267
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL+PTREL +QV V +Q+A+
Sbjct: 268 GKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 327
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
F S + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEA
Sbjct: 328 FVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEA 387
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D + A
Sbjct: 388 DRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDPPKKAAT 447
Query: 307 NLRQEFVSFSNIDEVR---LYNVL 327
L QEFV D ++ L+N++
Sbjct: 448 KLTQEFVRIRKRDHLKPALLFNLI 471
>gi|448528530|ref|XP_003869731.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis Co 90-125]
gi|380354084|emb|CCG23598.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis]
Length = 632
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 177/236 (75%), Gaps = 4/236 (1%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F+E AP E N++F ++ LSRP+LK+I +L++ PTPIQ++TIP+ALLG+DI A TG+
Sbjct: 142 FYESAPSNETNTTFQELQLSRPILKSIQSLSFTSPTPIQSSTIPIALLGKDIVAGAQTGS 201
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT-SVEVALSVG 198
GKTAA+++P++ERL++K + +T+ ++L PTREL +QVY V R+L QF ++ L+VG
Sbjct: 202 GKTAAYLIPLIERLIFK--NSTSTKAIILAPTRELAIQVYDVGRKLGQFVKNLSFGLAVG 259
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
GL ++ QE L+ PDIVIATPGRL+DH+ N+PSFS+ D++VLV+DEADRML+E F ++
Sbjct: 260 GLNLRQQEQQLKSRPDIVIATPGRLIDHIRNSPSFSVEDVQVLVIDEADRMLEEGFQEEL 319
Query: 259 KEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EI+ L + RQT+LFSATM V DLV +SL +PVRV +D VA L Q+FV
Sbjct: 320 TEILSLIPKQKRQTLLFSATMNTKVQDLVQLSLNKPVRVMIDPPKTVASRLEQQFV 375
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/314 (46%), Positives = 195/314 (62%), Gaps = 33/314 (10%)
Query: 1 DDSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKE 60
D +EE + E +E++ G + D D +E ++ H R+K + KK+K
Sbjct: 58 DQDGEEENDDEQREEDRGQDSTDEDEKE-------QLDHSQ---RKKSLDSKKEK----- 102
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEEN-SSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
+FF N SSF ++N+SRPLL+A AL Y PTPIQA
Sbjct: 103 -----------------PQFFSSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQA 145
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
A IP+AL GRDICG A TG+GKTAAF LPILERLL++PR RVL++ PTREL VQ++
Sbjct: 146 ACIPLALAGRDICGSAVTGSGKTAAFALPILERLLFRPRRIPAIRVLIITPTRELAVQLH 205
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
+ +LAQFT + +L VGGL KVQE LR PDIV+ATPGR++DHL NT S L ++
Sbjct: 206 SMIEKLAQFTDIRCSLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQSVGLEELA 265
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADR+L+ F ++ E+++LC RQTMLFSATMTD V++L+ +SL PVR+ D
Sbjct: 266 ILVLDEADRLLELGFREEIHELVKLCPSRRQTMLFSATMTDEVSELIKLSLKSPVRLSAD 325
Query: 300 NNHEVALNLRQEFV 313
+ E L +E +
Sbjct: 326 PSTERPSTLTEEVI 339
>gi|408399032|gb|EKJ78157.1| hypothetical protein FPSE_01618 [Fusarium pseudograminearum CS3096]
Length = 793
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/244 (51%), Positives = 174/244 (71%), Gaps = 11/244 (4%)
Query: 78 KEFFEDAPPVEEN--------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
K FF P EEN SSF M+LSRP+++ + ++ + PTPIQA +IP+AL+G+
Sbjct: 239 KAFF---APEEENNPDKKATASSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGK 295
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
D+ G A TG+GKT AF+LPILERLLY+P+ TRV+VL+PTREL +Q + V +LA FT
Sbjct: 296 DVVGGAETGSGKTGAFILPILERLLYRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFT 355
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
++ L+VGGL +K QE L+ PD++IATPGR +DH+ N+ SFS+ +E+LVLDEADRM
Sbjct: 356 DIKFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRM 415
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L++ FA ++ EI+ ++RQTMLFSATMT +V+ L+S+ L RP RV V++ + L
Sbjct: 416 LEDGFAEELNEILTTLPKSRQTMLFSATMTSSVDRLISIGLNRPARVMVNSQKKTVTTLV 475
Query: 310 QEFV 313
QEFV
Sbjct: 476 QEFV 479
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 166/222 (74%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + NLSRP+L+ + A+ + PTPIQ IPVALLG+DI G A TG+GKTAAF++PILE
Sbjct: 305 TFQEFNLSRPILRGLAAVGFTDPTPIQRKAIPVALLGKDIVGSAVTGSGKTAAFIVPILE 364
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLL++PR +RV++L+PTREL VQ Y V+ +LA FT V VGG ++ QE+VL+K
Sbjct: 365 RLLFRPRKVPTSRVVILMPTRELAVQCYNVSVKLATFTDVTFCQLVGGFSLREQENVLKK 424
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD++IATPGR +DH+ N+PSF++ +E+LVLDEADRML++ FA ++ EI+ ++RQT
Sbjct: 425 RPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQT 484
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATMTD+++ L+ V + RPVR+ VD+ L QEFV
Sbjct: 485 MLFSATMTDSIDKLIRVGMNRPVRLMVDSKKNTVSTLVQEFV 526
>gi|388580558|gb|EIM20872.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 801
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/249 (51%), Positives = 176/249 (70%), Gaps = 10/249 (4%)
Query: 71 YEENEGGKEFFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLG 128
++N EFF P N ++F + LSRP+LKAI L + +PTPIQ +PVAL G
Sbjct: 187 RKKN----EFFAQQPTASTNKKNTFTSLGLSRPILKAISGLGFTHPTPIQKTVMPVALAG 242
Query: 129 RDICGCAATGTGKTAAFMLPILERLLYKPRDDQN---TRVLVLVPTRELGVQVYQVTRQL 185
+D+ G A TG+GKTAAF+LP+LERL+Y+P+ TRVLVL PTREL Q ++V + L
Sbjct: 243 KDVVGQAVTGSGKTAAFILPVLERLMYRPKTSSKGGETRVLVLCPTRELAQQCFEVGQSL 302
Query: 186 AQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
++F + L VGGL +K+QE L++ PD+VIATPGRL+DH+ N+PSF+L +++L++D
Sbjct: 303 SKFMGDISFCLCVGGLSLKLQEQQLKQRPDVVIATPGRLIDHVRNSPSFTLDALDILIMD 362
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADRML++ F ++ EI++ C + RQTMLFSATMTD V++LV +SL +PVR+FVD
Sbjct: 363 EADRMLEDGFKDELDEIVKECPKNRQTMLFSATMTDKVDELVRLSLNKPVRLFVDPKKST 422
Query: 305 ALNLRQEFV 313
A L QEFV
Sbjct: 423 AKGLTQEFV 431
>gi|358377688|gb|EHK15371.1| hypothetical protein TRIVIDRAFT_196232 [Trichoderma virens Gv29-8]
Length = 1380
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 165/223 (73%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF M+LSRP+L+ I + + PTPIQA TIP+AL+G+D+ G A TG+GKTAAF+LPIL
Sbjct: 243 SSFQAMSLSRPILRGITTVGFSKPTPIQAKTIPIALMGKDLVGGAVTGSGKTAAFVLPIL 302
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ TRV++L PTREL +Q + V +LA T ++ L+VGGL +K QE LR
Sbjct: 303 ERLLYRPKKIPTTRVVILTPTRELAIQCHAVATKLAAHTDIKFTLAVGGLSLKAQEVELR 362
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD++IATPGR +DH+ N+ SFS+ +E+LVLDEADRML++ FA ++ EI+ ++RQ
Sbjct: 363 LRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQ 422
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT V+ L+ V L +PVRV VD+ + A L QEFV
Sbjct: 423 TMLFSATMTSTVDRLIKVGLNKPVRVMVDSQKKTAGTLTQEFV 465
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 179/263 (68%), Gaps = 2/263 (0%)
Query: 67 EAEEYE-ENEGGKEFFEDAPPVEENS-SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPV 124
EA EY+ E+ K FF V ++ +F ++NLSRPLL+A L Y PTPIQAA IP+
Sbjct: 141 EAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPL 200
Query: 125 ALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQ 184
AL GRD+C A TG+GKTAAF LP LERLL++P+ TRVL+L PTREL VQ++ + +
Sbjct: 201 ALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQN 260
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LAQFT ++ L VGGL V+ QE VLR PDIV+ATPGR++DHL N+ S L D+ VL+LD
Sbjct: 261 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILD 320
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADR+L FA+++ E++RLC + RQTMLFSATMT+ V +LV +SL +P+R+ D +
Sbjct: 321 EADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARR 380
Query: 305 ALNLRQEFVSFSNIDEVRLYNVL 327
L +E V E VL
Sbjct: 381 PPGLTEEVVRIRRTREANQEAVL 403
>gi|223590197|sp|A5DKW3.2|DRS1_PICGU RecName: Full=ATP-dependent RNA helicase DRS1
gi|190347530|gb|EDK39816.2| hypothetical protein PGUG_03914 [Meyerozyma guilliermondii ATCC
6260]
Length = 705
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 183/257 (71%), Gaps = 5/257 (1%)
Query: 79 EFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
EF+E++ E+ +SF + LSRPLLK +G L Y P+ IQAA+IP+A++G+DI A TG
Sbjct: 186 EFYEESKTTEKITSFQALQLSRPLLKGVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTG 245
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSV 197
+GKTAA+++PI+ERL+YKP TRV+VL PTREL +QV V ++L QF + + L+V
Sbjct: 246 SGKTAAYLIPIIERLIYKPAAVSATRVIVLTPTRELAIQVCDVGKKLGQFVANLNFGLAV 305
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL ++ QE L+ PDIV+ATPGRL+DH+ N+PSFS+ ++EVLV+DEADRML+E F +
Sbjct: 306 GGLNLRQQEQQLKSRPDIVVATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVE 365
Query: 258 MKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
+ EI+ L + RQTMLFSATM + DL+ +SL +PVR+ V+ + A L QEFV
Sbjct: 366 LTEILELIPKHKRQTMLFSATMNTKIQDLIQLSLDKPVRIMVNPPKQAASKLVQEFVRIR 425
Query: 317 NIDEVR---LYNVLGLM 330
+ ++ LY++L L+
Sbjct: 426 KREHLKPALLYHLLRLV 442
>gi|146417127|ref|XP_001484533.1| hypothetical protein PGUG_03914 [Meyerozyma guilliermondii ATCC
6260]
Length = 705
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 183/257 (71%), Gaps = 5/257 (1%)
Query: 79 EFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
EF+E++ E+ +SF + LSRPLLK +G L Y P+ IQAA+IP+A++G+DI A TG
Sbjct: 186 EFYEESKTTEKITSFQALQLSRPLLKGVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTG 245
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSV 197
+GKTAA+++PI+ERL+YKP TRV+VL PTREL +QV V ++L QF + + L+V
Sbjct: 246 SGKTAAYLIPIIERLIYKPAAVSATRVIVLTPTRELAIQVCDVGKKLGQFVANLNFGLAV 305
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL ++ QE L+ PDIV+ATPGRL+DH+ N+PSFS+ ++EVLV+DEADRML+E F +
Sbjct: 306 GGLNLRQQEQQLKSRPDIVVATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVE 365
Query: 258 MKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
+ EI+ L + RQTMLFSATM + DL+ +SL +PVR+ V+ + A L QEFV
Sbjct: 366 LTEILELIPKHKRQTMLFSATMNTKIQDLIQLSLDKPVRIMVNPPKQAASKLVQEFVRIR 425
Query: 317 NIDEVR---LYNVLGLM 330
+ ++ LY++L L+
Sbjct: 426 KREHLKPALLYHLLRLV 442
>gi|302792278|ref|XP_002977905.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
gi|300154608|gb|EFJ21243.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
Length = 741
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 163/223 (73%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF ++N+SRPLL+A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LPIL
Sbjct: 115 SSFIELNVSRPLLRACDALGYRQPTPIQAACIPLALAGRDICGSAVTGSGKTAAFALPIL 174
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++PR RVL++ PTREL VQ++ + +LAQFT + L VGGL KVQE LR
Sbjct: 175 ERLLFRPRRIPAIRVLIITPTRELAVQLHSMIEKLAQFTDIRCCLVVGGLSSKVQEVALR 234
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL NT S L ++ +LVLDEADR+L+ F ++ E+++LC RQ
Sbjct: 235 THPDIVVATPGRMIDHLRNTQSVGLEELAILVLDEADRLLELGFREEIHELVKLCPSRRQ 294
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMTD V++L+ +SL PVR+ D + E L +E +
Sbjct: 295 TMLFSATMTDEVSELIKLSLKSPVRLSADPSTERPSTLTEEVI 337
>gi|242778101|ref|XP_002479171.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722790|gb|EED22208.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 833
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 163/224 (72%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ SF NLSRP+L+ + A+ + PTPIQ IPVALLG+D+ G A TG+GKT AF++PI
Sbjct: 310 HGSFQNYNLSRPILRGLAAVGFTKPTPIQRKAIPVALLGKDVVGGAVTGSGKTGAFIIPI 369
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+PR +RV +L+PTREL VQ Y V +LA +T + +GG ++ QE+VL
Sbjct: 370 LERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLIGGFSLREQENVL 429
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+K PDI+IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 430 KKRPDIIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSR 489
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V+ L+ V L RPVR+ VD + A L QEFV
Sbjct: 490 QTMLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQTAGTLVQEFV 533
>gi|389630538|ref|XP_003712922.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
gi|351645254|gb|EHA53115.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
Length = 799
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 204/313 (65%), Gaps = 18/313 (5%)
Query: 1 DDSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKE 60
+DS++ ++ E +EG E D D E A P + H + + + ++ AK
Sbjct: 192 EDSAEASEGQDGSEASEGEEGDSDD--ESVASP---VPHPDDDQESESEQDEDEEEAAKM 246
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
+ + + + N+G N+SF M+LSRP+L+ + ++ + PTPIQ+
Sbjct: 247 KEFFAADEPKSDTNKG-------------NASFQSMSLSRPILRGLTSVGFAKPTPIQSK 293
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIP+AL+G+D+ G A TG+GKTAAF++PILERLLY+P+ +RV++L PTREL +Q +
Sbjct: 294 TIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAIQCHA 353
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA T ++ L+VGGL +KVQES LR PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 354 VATKLASHTDIKFCLAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASFAVDTVEI 413
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V++L+ V L +PVR+ VD+
Sbjct: 414 LVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDNLIRVGLNKPVRLMVDS 473
Query: 301 NHEVALNLRQEFV 313
+ + L QEFV
Sbjct: 474 QKKTVVTLTQEFV 486
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 179/263 (68%), Gaps = 2/263 (0%)
Query: 67 EAEEYE-ENEGGKEFFEDAPPVEENS-SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPV 124
EA EY+ E+ K FF V ++ +F ++NLSRPLL+A L Y PTPIQAA IP+
Sbjct: 141 EAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPL 200
Query: 125 ALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQ 184
AL GRD+C A TG+GKTAAF LP LERLL++P+ TRVL+L PTREL VQ++ + +
Sbjct: 201 ALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQN 260
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LAQFT ++ L VGGL V+ QE VLR PDIV+ATPGR++DHL N+ S L D+ VL+LD
Sbjct: 261 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILD 320
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADR+L FA+++ E++RLC + RQTMLFSATMT+ V +LV +SL +P+R+ D +
Sbjct: 321 EADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARR 380
Query: 305 ALNLRQEFVSFSNIDEVRLYNVL 327
L +E V E VL
Sbjct: 381 PPGLTEEVVRIRRTREANQEAVL 403
>gi|46124501|ref|XP_386804.1| hypothetical protein FG06628.1 [Gibberella zeae PH-1]
gi|91206590|sp|Q4I830.1|DRS1_GIBZE RecName: Full=ATP-dependent RNA helicase DRS1
Length = 796
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/244 (50%), Positives = 173/244 (70%), Gaps = 11/244 (4%)
Query: 78 KEFFEDAPPVEEN--------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
K FF P EEN SSF M+LSRP+++ + ++ + PTPIQA +IP+AL+G+
Sbjct: 238 KAFF---APEEENNPDKKATASSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGK 294
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
D+ G A TG+GKT AF+LPILERLLY+P+ TRV+VL+PTREL +Q + V +LA FT
Sbjct: 295 DVVGGAETGSGKTGAFILPILERLLYRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFT 354
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
++ L+VGGL +K QE L+ PD++IATPGR +DH+ N+ SFS+ +E+LVLDEADRM
Sbjct: 355 DIKFTLAVGGLSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRM 414
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ + L RP RV V++ + L
Sbjct: 415 LEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIQIGLNRPARVMVNSQKKTVTTLV 474
Query: 310 QEFV 313
QEFV
Sbjct: 475 QEFV 478
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 179/262 (68%), Gaps = 2/262 (0%)
Query: 68 AEEYE-ENEGGKEFFEDAPPVEENS-SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
A EY+ E+ K FF V ++ SF ++NLSRPLL+A L Y PTPIQAA IP+A
Sbjct: 145 AAEYKPEDFTPKPFFSTVDGVSFHADSFMELNLSRPLLRACETLGYKKPTPIQAACIPLA 204
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L GRD+C A TG+GKTAAF LP LERLL++P+ TRVL+L PTREL VQ++ + ++L
Sbjct: 205 LTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQKL 264
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
AQFT ++ L VGGL V+ QE VLR PDIV+ATPGR++DHL N+ S L D+ VL+LDE
Sbjct: 265 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDE 324
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADR+L FA+++ E++RLC + RQTMLFSATMT+ V +LV +SL +P+R+ D +
Sbjct: 325 ADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRP 384
Query: 306 LNLRQEFVSFSNIDEVRLYNVL 327
L +E V E VL
Sbjct: 385 PGLTEEVVRIRRTREANQEAVL 406
>gi|254571715|ref|XP_002492967.1| Nucleolar DEAD-box protein required for ribosome assembly and
function [Komagataella pastoris GS115]
gi|238032765|emb|CAY70788.1| Nucleolar DEAD-box protein required for ribosome assembly and
function [Komagataella pastoris GS115]
gi|328353020|emb|CCA39418.1| ATP-dependent RNA helicase DDX27 [Komagataella pastoris CBS 7435]
Length = 761
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/275 (48%), Positives = 188/275 (68%), Gaps = 12/275 (4%)
Query: 65 QVEAEEYEENEGGKE----FFEDAPPVEENSSFH----QMNLSRPLLKAIGALNYIYPTP 116
QVE E+ +E E E +F+ E N S H ++LSRP+LK + L Y P+P
Sbjct: 213 QVEPEDIQEPEDTVEEVNRYFDQTKNQEVNKSVHVTFQSLSLSRPVLKGLSTLGYTKPSP 272
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
IQ+A+IP+ LLG+DI A TG+GKTAA+M+PI+ERLL+KP TRV+VL PTREL +
Sbjct: 273 IQSASIPIGLLGKDIVAGAQTGSGKTAAYMIPIIERLLFKPSKISATRVVVLTPTRELAI 332
Query: 177 QVYQVTRQLAQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV V ++++QF + +E L+VGGL ++ QE LRK PDIVIATPGR +DH+ N+PSFS+
Sbjct: 333 QVNDVGKKISQFVNGIEFGLAVGGLNLRKQEQELRKRPDIVIATPGRFIDHIRNSPSFSV 392
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LV+DEADRML++ F ++KEI+ L +QTMLFSATM +++ DL+ +SL +PVR
Sbjct: 393 ESVEILVIDEADRMLEDGFQEELKEILTLLPGKKQTMLFSATMNNSIKDLIQLSLHKPVR 452
Query: 296 VFVDNNHEVALNLRQEFVSFSNIDEVR---LYNVL 327
+ +D + L QEFV E++ L+++L
Sbjct: 453 IMIDPPKQAVSGLVQEFVRLRKNLEMKPALLFDIL 487
>gi|68473179|ref|XP_719395.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|74656492|sp|Q5ACK7.1|DRS1_CANAL RecName: Full=ATP-dependent RNA helicase DRS1
gi|46441210|gb|EAL00509.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|238880416|gb|EEQ44054.1| hypothetical protein CAWG_02313 [Candida albicans WO-1]
Length = 613
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/254 (49%), Positives = 183/254 (72%), Gaps = 7/254 (2%)
Query: 79 EFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
+F+E++ P + ++SF + LSRP+LK I L + PTPIQ+A+IP+ALLG+DI A TG
Sbjct: 118 DFYEESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTG 177
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT-SVEVALSV 197
+GKT A+M+PI+ERLLYKP +T+V++L PTREL +QVY+ ++L+ ++ + L+V
Sbjct: 178 SGKTGAYMIPIIERLLYKP--STSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAV 235
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL ++ QE L+ PDIVIATPGRL+DH+ N+PSFS+ DI+VLV+DEADRML+E F +
Sbjct: 236 GGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDE 295
Query: 258 MKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
+ EI+ L + RQT+LFSATM + DL+ +SL +PVR+ +D VA L Q+FV
Sbjct: 296 LTEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFVRIR 355
Query: 317 NIDEVR---LYNVL 327
D+++ LY +L
Sbjct: 356 KRDQLKPALLYQLL 369
>gi|152013519|sp|A4QYM6.1|DRS1_MAGO7 RecName: Full=ATP-dependent RNA helicase DRS1
gi|440472865|gb|ELQ41697.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae Y34]
gi|440482949|gb|ELQ63394.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae P131]
Length = 790
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/317 (43%), Positives = 203/317 (64%), Gaps = 26/317 (8%)
Query: 1 DDSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKE 60
+DS++ ++ E +EG E D D E A P + H + + + ++ AK
Sbjct: 183 EDSAEASEGQDGSEASEGEEGDSDD--ESVASP---VPHPDDDQESESEQDEDEEEAAKM 237
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEE----NSSFHQMNLSRPLLKAIGALNYIYPTP 116
KEFF P + N+SF M+LSRP+L+ + ++ + PTP
Sbjct: 238 -----------------KEFFAADEPKSDTNKGNASFQSMSLSRPILRGLTSVGFAKPTP 280
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
IQ+ TIP+AL+G+D+ G A TG+GKTAAF++PILERLLY+P+ +RV++L PTREL +
Sbjct: 281 IQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAI 340
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
Q + V +LA T ++ L+VGGL +KVQES LR PD++IATPGR +DH+ N+ SF++
Sbjct: 341 QCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASFAVD 400
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V++L+ V L +PVR+
Sbjct: 401 TVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDNLIRVGLNKPVRL 460
Query: 297 FVDNNHEVALNLRQEFV 313
VD+ + + L QEFV
Sbjct: 461 MVDSQKKTVVTLTQEFV 477
>gi|342889281|gb|EGU88436.1| hypothetical protein FOXB_01039 [Fusarium oxysporum Fo5176]
Length = 797
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 170/240 (70%), Gaps = 4/240 (1%)
Query: 78 KEFF----EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
K FF E+A + SSF M+LSRP+L+ + + + PTPIQA +IP+AL+G+D+ G
Sbjct: 241 KAFFAPEEEEASGKKSASSFQAMSLSRPILRGLATVGFSKPTPIQAKSIPIALMGKDLVG 300
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
A TG+GKT AF++PILERLLY+P+ TRV+VL PTREL +Q + V +LA FT ++
Sbjct: 301 GAVTGSGKTGAFIVPILERLLYRPKKIPTTRVVVLTPTRELAIQCHAVATKLAAFTDIKF 360
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
L+VGGL +K QE L+ PD++IATPGR +DH+ N+ SFS+ +E++VLDEADRML++
Sbjct: 361 TLAVGGLSLKAQEVELKLRPDVIIATPGRFIDHMRNSASFSVDTVEIMVLDEADRMLEDG 420
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
FA ++ EI+ ++RQTMLFSATMT V+ L+ + L +P RV VD+ + L QEFV
Sbjct: 421 FADELNEILTTLPKSRQTMLFSATMTSTVDRLIKIGLNKPARVMVDSQKKTVTTLVQEFV 480
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/250 (51%), Positives = 175/250 (70%), Gaps = 5/250 (2%)
Query: 89 ENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
E +SFH ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTA
Sbjct: 178 EGASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTA 237
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LP+LERLL++P+ RVL+L PTREL QV+ + +LAQFT + L VGGL K
Sbjct: 238 AFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTK 297
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
VQE LR PDIV+ATPGR++DHL N+ S L D+ V++LDEADR+L+ F+++++E+IR
Sbjct: 298 VQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIR 357
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRL 323
+C + RQTMLFSATMT+ +++L+ +SL +PVR+ D + + L +E V E
Sbjct: 358 MCPKRRQTMLFSATMTEEIDELIKLSLNKPVRLEADPSLKRPATLTEEVVRIRRARESNQ 417
Query: 324 YNVLGLMLLR 333
VL + L+
Sbjct: 418 EAVLLALCLK 427
>gi|227206264|dbj|BAH57187.1| AT4G16630 [Arabidopsis thaliana]
Length = 617
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 179/263 (68%), Gaps = 2/263 (0%)
Query: 67 EAEEYE-ENEGGKEFFEDAPPVEENS-SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPV 124
EA EY+ E+ K FF V ++ +F ++NLSRPLL+A L Y PTPIQAA IP+
Sbjct: 79 EAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPL 138
Query: 125 ALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQ 184
AL GRD+C A TG+GKTAAF LP LERLL++P+ TRVL+L PTREL VQ++ + +
Sbjct: 139 ALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQN 198
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
LAQFT ++ L VGGL V+ QE VLR PDIV+ATPGR++DHL N+ S L D+ VL+LD
Sbjct: 199 LAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILD 258
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADR+L FA+++ E++RLC + RQTMLFSATMT+ V +LV +SL +P+R+ D +
Sbjct: 259 EADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARR 318
Query: 305 ALNLRQEFVSFSNIDEVRLYNVL 327
L +E V E VL
Sbjct: 319 PPGLTEEVVRIRRTREANQEAVL 341
>gi|45184660|ref|NP_982378.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|74695973|sp|Q75F95.1|DRS1_ASHGO RecName: Full=ATP-dependent RNA helicase DRS1
gi|44980006|gb|AAS50202.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|374105576|gb|AEY94487.1| FAAL164Cp [Ashbya gossypii FDAG1]
Length = 734
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/272 (48%), Positives = 186/272 (68%), Gaps = 9/272 (3%)
Query: 65 QVEAEEYEENEGGKEFFEDAPPVEE-----NSSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
Q EA E + E +F+ + EE +S+F+ ++LSRP+LK + AL Y P+PIQ
Sbjct: 188 QEEAREEDTAEEMAQFYAPSNEGEEAKNVVHSTFNSLSLSRPVLKGLAALGYTKPSPIQG 247
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
ATIP+ALLG+D+ A TG+GKTAAFM+PI+ERLLYKP +TRVLVL PTREL +QV
Sbjct: 248 ATIPIALLGKDVIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVLVLTPTRELAIQVA 307
Query: 180 QVTRQLAQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDI 238
V ++L +F S + L+VGGL ++ QE L+ PDIVIATPGR++DH+ N+ SFS+ +
Sbjct: 308 DVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRPDIVIATPGRIIDHIRNSASFSVDSV 367
Query: 239 EVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
EVLV+DEADRML++ F ++ EI+ L RQT+LFSATM + L+S+SL +PVR+ +
Sbjct: 368 EVLVIDEADRMLEDGFQDELNEIMSLIPSKRQTLLFSATMNSRIKQLISLSLKKPVRIMI 427
Query: 299 DNNHEVALNLRQEFVSFSNIDEVR---LYNVL 327
D + A L QEFV + ++ LY++L
Sbjct: 428 DPPKQAANKLTQEFVRLRKREHLKPALLYHLL 459
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 163/224 (72%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
NS+F NLSRP+L+ + A+ + PTPIQ IP+ LLG+D+ G A TG+GKTAAF++PI
Sbjct: 318 NSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPIGLLGKDLVGGAVTGSGKTAAFIIPI 377
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+PR +RV +L+PTREL VQ Y V +LA +T + VGG ++ QE+VL
Sbjct: 378 LERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVL 437
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 438 KQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILNTIPKSR 497
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V+ L+ V L RPVR+ VD+ L QEFV
Sbjct: 498 QTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHTVGTLVQEFV 541
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 163/224 (72%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
NS+F NLSRP+L+ + A+ + PTPIQ IP+ LLG+D+ G A TG+GKTAAF++PI
Sbjct: 318 NSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPIGLLGKDLVGGAVTGSGKTAAFIIPI 377
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+PR +RV +L+PTREL VQ Y V +LA +T + VGG ++ QE+VL
Sbjct: 378 LERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVL 437
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 438 KQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILNTIPKSR 497
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V+ L+ V L RPVR+ VD+ L QEFV
Sbjct: 498 QTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHTVGTLVQEFV 541
>gi|170083961|ref|XP_001873204.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650756|gb|EDR14996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 355
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 168/220 (76%), Gaps = 2/220 (0%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
MNLSRPLLK+I +L + PTPIQAA IPVALLG+D+ G A TG+GKTAAF++P++ERLLY
Sbjct: 1 MNLSRPLLKSIASLGFNKPTPIQAAAIPVALLGKDVVGNAMTGSGKTAAFIIPMVERLLY 60
Query: 156 --KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCP 213
K + TR LVLVPTREL VQ + V +L+ T +++ L VGGL +K QE LR P
Sbjct: 61 REKGKKAAATRCLVLVPTRELAVQCFDVGVKLSTHTDIQLCLLVGGLSLKSQEVALRARP 120
Query: 214 DIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTML 273
DIVIATPGRL+DH+ N+P+F+L I++LVLDEADRML + FA ++ EII+ C +RQTML
Sbjct: 121 DIVIATPGRLIDHIRNSPAFTLDAIDILVLDEADRMLSDGFADELAEIIKSCPVSRQTML 180
Query: 274 FSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
FSATMTD+V++LV +SL +PVR+FVD A L QEFV
Sbjct: 181 FSATMTDSVDELVKMSLNKPVRLFVDPRKATARGLVQEFV 220
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 163/224 (72%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
NS+F NLSRP+L+ + A+ + PTPIQ IPV LLG+D+ G A TG+GKTAAF++PI
Sbjct: 318 NSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPI 377
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+PR +RV +L+PTREL VQ Y V +LA +T + VGG ++ QE+VL
Sbjct: 378 LERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVL 437
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 438 KQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILNTIPKSR 497
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V+ L+ V L RPVR+ VD+ L QEFV
Sbjct: 498 QTMLFSATMTDSVDKLIRVGLNRPVRLMVDSKKHTVGTLVQEFV 541
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 173/243 (71%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP+L
Sbjct: 162 NSFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 221
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ RVL+L PTREL QV+ + +LAQFT + L VGGL KVQE LR
Sbjct: 222 ERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALR 281
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL N+ S L D+ V++LDEADR+L+ F+++++E+IR+C + RQ
Sbjct: 282 SMPDIVVATPGRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIRMCPKRRQ 341
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
TMLFSATMT+ +++L+ +SL +PVR+ D + + L +E V E VL +
Sbjct: 342 TMLFSATMTEEIDELIKLSLNKPVRLEADPSLKRPATLTEEVVRIRRARESNQEAVLLAL 401
Query: 331 LLR 333
L+
Sbjct: 402 CLK 404
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 173/243 (71%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP+L
Sbjct: 162 NSFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 221
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ RVL+L PTREL QV+ + +LAQFT + L VGGL KVQE LR
Sbjct: 222 ERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALR 281
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL N+ S L D+ V++LDEADR+L+ F+++++E+IR+C + RQ
Sbjct: 282 SMPDIVVATPGRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIRMCPKRRQ 341
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
TMLFSATMT+ +++L+ +SL +PVR+ D + + L +E V E VL +
Sbjct: 342 TMLFSATMTEEIDELIKLSLNKPVRLEADPSLKRPATLTEEVVRIRRARESNQEAVLLAL 401
Query: 331 LLR 333
L+
Sbjct: 402 CLK 404
>gi|302917131|ref|XP_003052376.1| hypothetical protein NECHADRAFT_1180 [Nectria haematococca mpVI
77-13-4]
gi|256733315|gb|EEU46663.1| hypothetical protein NECHADRAFT_1180 [Nectria haematococca mpVI
77-13-4]
Length = 768
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 183/268 (68%), Gaps = 8/268 (2%)
Query: 78 KEFF---EDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
K FF E A P +++ SSF M+LSRP+L+ + ++ + PTPIQ+ +IP+AL+G+D+
Sbjct: 237 KAFFAPEEPAKPGKKSDMSSFQAMSLSRPILRGLASVGFTKPTPIQSKSIPIALMGKDLV 296
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKT AF++PILERLLY+P+ TRV+VL PTREL +Q + V +LA +T ++
Sbjct: 297 GGAVTGSGKTGAFIVPILERLLYRPKKIPTTRVVVLTPTRELAIQCHAVATKLAAYTDIK 356
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
L+VGGL +KVQE+ LR PD++IATPGR +DH+ N+ SF++ +E+L+LDEADRML++
Sbjct: 357 FTLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSASFNVDTVEILILDEADRMLED 416
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
FA ++ EI+ ++RQTMLFSATMT V+ L+ V + +P RV VD+ + L QEF
Sbjct: 417 GFADELNEILTTLPKSRQTMLFSATMTSTVDRLIRVGMNKPARVMVDSQKKTVGTLVQEF 476
Query: 313 VSFSNIDEVRLYNVLGLM---LLRENCL 337
V E + L + L RE +
Sbjct: 477 VRLRPGREEKRMGYLAYICKTLYRERVI 504
>gi|319411502|emb|CBQ73546.1| related to DRS1-RNA helicase of the DEAD box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/257 (50%), Positives = 175/257 (68%), Gaps = 12/257 (4%)
Query: 69 EEYEENEGGKEFFEDAPPVEEN--------SSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E +E FF D P + +SF +LSRP+L+A+ +L++ PTPIQ+
Sbjct: 303 ETEQEKAKKAAFFADEPAATSSKKSNADAETSFGAFSLSRPVLRALSSLSFHKPTPIQSR 362
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPR---DDQNTRVLVLVPTRELGVQ 177
TIP+AL G+DI A TG+GKTAAFM+P LERL ++ + + TRVL+L PTREL +Q
Sbjct: 363 TIPIALAGKDIVAGAVTGSGKTAAFMIPTLERLTWRAKGRAQEAKTRVLILAPTRELAIQ 422
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
Y V + +A+FT + L VGGL VK QE+ L+ P++VIATPGRL+DH+ N+ SF+L D
Sbjct: 423 CYSVGKSIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDD 482
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+E+LV+DEADRML++ FA ++ EI++ C + RQTMLFSATMTD V LV +SL RPVR+
Sbjct: 483 VEILVMDEADRMLEDGFADELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKRPVRL 542
Query: 297 FVDNNHEVALNLRQEFV 313
FVD A L QEFV
Sbjct: 543 FVDPKRTTAKKLIQEFV 559
>gi|354547460|emb|CCE44195.1| hypothetical protein CPAR2_504190 [Candida parapsilosis]
Length = 604
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 177/236 (75%), Gaps = 4/236 (1%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F+E AP E +++F ++ LSRP+LK+I +L++ PTPIQ++TIP+ALLG+DI A TG+
Sbjct: 114 FYESAPTNETSTTFQELQLSRPILKSIQSLSFTSPTPIQSSTIPIALLGKDIVAGAQTGS 173
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT-SVEVALSVG 198
GKTAA+++P++ERL++K + +T+ ++L PTREL +QVY V ++L QF ++ L+VG
Sbjct: 174 GKTAAYLIPLIERLIFK--NATSTKAIILTPTRELAIQVYDVGKKLGQFVKNLSFGLAVG 231
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
GL ++ QE L+ PDIVIATPGRL+DH+ N+PSFS+ D++VLV+DEADRML+E F ++
Sbjct: 232 GLNLRQQEQQLKSRPDIVIATPGRLIDHIRNSPSFSVEDVQVLVIDEADRMLEEGFQEEL 291
Query: 259 KEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
EI+ L + RQT+LFSATM V DLV +SL +PVRV +D VA L Q+FV
Sbjct: 292 TEILSLIPKQKRQTLLFSATMNTKVQDLVQLSLNKPVRVMIDPPKTVASRLEQQFV 347
>gi|158514833|sp|A3LSN3.3|DRS1_PICST RecName: Full=ATP-dependent RNA helicase DRS1
Length = 741
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 175/255 (68%), Gaps = 7/255 (2%)
Query: 75 EGGKEFFED-----APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
E EF+ D + + +++F + LSRP+LK + L Y P+PIQ+A+IP+ALLGR
Sbjct: 201 EAMAEFYADEKETKSAKSQVHTTFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGR 260
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
DI A TG+GKTAA+M+PI+ERLLYKP +TRV+VL PTREL +QV V +++ QF
Sbjct: 261 DIVAGAVTGSGKTAAYMIPIIERLLYKPSKVASTRVIVLTPTRELAIQVGDVGKKIGQFV 320
Query: 190 -SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADR 248
++ L+VGGL ++ QE L+ PD+VIATPGRL+DH+ N+PSFS+ +EVLV+DEADR
Sbjct: 321 NNLNFGLAVGGLNLRQQEQQLKSRPDVVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADR 380
Query: 249 MLDEHFASQMKEIIRLCSRT-RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
MLDE F ++ EI+ L + RQT+LFSATM + DL+ +SL RPVR+ +D A
Sbjct: 381 MLDEGFQVELTEILSLIPKNKRQTLLFSATMNTKIQDLIQLSLQRPVRIMIDPPKTAATK 440
Query: 308 LRQEFVSFSNIDEVR 322
L QEFV D ++
Sbjct: 441 LTQEFVRIRKRDHLK 455
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 173/243 (71%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP+L
Sbjct: 183 NSFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 242
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ RVL+L PTREL Q++ + +LAQFT + L VGGL K+QE LR
Sbjct: 243 ERLLFRPKRVPAIRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALR 302
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL N+ S L D+ V++LDEADR+L+ F+++++E+IR+C + RQ
Sbjct: 303 SMPDIVVATPGRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIRMCPKRRQ 362
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
TMLFSATMT+ +++LV +SL +PVR+ D + + L +E V E VL +
Sbjct: 363 TMLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEVVRIRRARESNQEAVLLAL 422
Query: 331 LLR 333
L+
Sbjct: 423 CLK 425
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 173/243 (71%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF ++NLSRPL++A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP+L
Sbjct: 167 NSFLELNLSRPLVRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 226
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ RVL+L PTREL Q++ + +LAQFT + L VGGL K+QE LR
Sbjct: 227 ERLLFRPKRVPAIRVLILTPTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALR 286
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL N+ S L D+ V++LDEADR+L+ F+++++E+IR+C + RQ
Sbjct: 287 SMPDIVVATPGRIIDHLRNSLSVGLEDLAVVILDEADRLLELGFSAEIQELIRMCPKRRQ 346
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
TMLFSATMT+ +++LV +SL +PVR+ D + + L +E V E VL +
Sbjct: 347 TMLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEVVRIRRARESNQEAVLLAL 406
Query: 331 LLR 333
L+
Sbjct: 407 CLK 409
>gi|150864695|ref|XP_001383630.2| nucleolar DEAD-box protein required for synthesis of 60S ribosomal
subunits [Scheffersomyces stipitis CBS 6054]
gi|149385951|gb|ABN65601.2| nucleolar DEAD-box protein required for synthesis of 60S ribosomal
subunits, partial [Scheffersomyces stipitis CBS 6054]
Length = 672
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/255 (49%), Positives = 175/255 (68%), Gaps = 7/255 (2%)
Query: 75 EGGKEFFED-----APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
E EF+ D + + +++F + LSRP+LK + L Y P+PIQ+A+IP+ALLGR
Sbjct: 138 EAMAEFYADEKETKSAKSQVHTTFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGR 197
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
DI A TG+GKTAA+M+PI+ERLLYKP +TRV+VL PTREL +QV V +++ QF
Sbjct: 198 DIVAGAVTGSGKTAAYMIPIIERLLYKPSKVASTRVIVLTPTRELAIQVGDVGKKIGQFV 257
Query: 190 -SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADR 248
++ L+VGGL ++ QE L+ PD+VIATPGRL+DH+ N+PSFS+ +EVLV+DEADR
Sbjct: 258 NNLNFGLAVGGLNLRQQEQQLKSRPDVVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADR 317
Query: 249 MLDEHFASQMKEIIRLCSRT-RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
MLDE F ++ EI+ L + RQT+LFSATM + DL+ +SL RPVR+ +D A
Sbjct: 318 MLDEGFQVELTEILSLIPKNKRQTLLFSATMNTKIQDLIQLSLQRPVRIMIDPPKTAATK 377
Query: 308 LRQEFVSFSNIDEVR 322
L QEFV D ++
Sbjct: 378 LTQEFVRIRKRDHLK 392
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 164/224 (73%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+S+F NLSRP+L+ + A+ + PTPIQ IPV LLG+D+ G A TG+GKTAAF++PI
Sbjct: 311 SSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPI 370
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+PR +RV++L+PTREL VQ Y V +LA +T + VGG ++ QE+VL
Sbjct: 371 LERLLYRPRKVPTSRVVILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVL 430
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 431 KQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSR 490
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V+ L+ V L RPVR+ VD + L QEFV
Sbjct: 491 QTMLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQTVGTLVQEFV 534
>gi|384249200|gb|EIE22682.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 662
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 169/247 (68%), Gaps = 8/247 (3%)
Query: 71 YEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
Y + G +F S+F ++LSRPLLKA AL YI PTPIQAA IP+AL GRD
Sbjct: 105 YAQTPDGTKF--------SASAFSDLHLSRPLLKACTALGYINPTPIQAACIPLALAGRD 156
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
ICG A TG+GKTAAF LP+LERLL++ R T LVL PTREL VQV+ + LAQFT
Sbjct: 157 ICGSAITGSGKTAAFALPLLERLLFRNRRIAATYGLVLTPTRELAVQVHSMITNLAQFTD 216
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
+ +AL VGGL ++VQ + LR P++V+ATPGRL+DHL NT S L D++ LVLDEADR+L
Sbjct: 217 IRIALVVGGLSLQVQSATLRTSPEVVVATPGRLIDHLRNTQSVGLEDLQALVLDEADRLL 276
Query: 251 DEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
F+ ++KE++RL R RQT+LFSATMT+ V DL ++SL RPVR+ D +L Q
Sbjct: 277 QMGFSEEIKEVLRLTPRKRQTLLFSATMTEEVRDLAALSLQRPVRLAADAAGAAPRSLTQ 336
Query: 311 EFVSFSN 317
E V F
Sbjct: 337 EIVRFKG 343
>gi|50286247|ref|XP_445552.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661437|sp|Q6FW42.1|DRS1_CANGA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49524857|emb|CAG58463.1| unnamed protein product [Candida glabrata]
Length = 725
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 174/244 (71%), Gaps = 4/244 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E + +F+ + LSRP++K + L Y+ P+PIQ+ATIP+ALLG+DI A TG+GKTAAFM+
Sbjct: 203 EVHKTFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 262
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQE 206
PI+ERLLYKP +TRV+VL PTREL +QV V +++ QF S + L+VGGL ++ QE
Sbjct: 263 PIIERLLYKPAKVASTRVIVLTPTRELAIQVADVGKKIGQFVSNLTFGLAVGGLNLRQQE 322
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+L+ PDIVIATPGR +DH+ N+ SF++ +EVLV+DEADRML++ F ++ EI+ L
Sbjct: 323 QMLKTRPDIVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQDELNEIMSLLP 382
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---L 323
RQT+LFSATM + L+S+SL RPVR+ +D + A L QEFV D ++ L
Sbjct: 383 SKRQTLLFSATMNSRIKQLISLSLKRPVRIMIDPPKQAATKLTQEFVRIRKRDHLKPSLL 442
Query: 324 YNVL 327
+N++
Sbjct: 443 FNLI 446
>gi|388854481|emb|CCF51868.1| related to DRS1-RNA helicase of the DEAD box family [Ustilago
hordei]
Length = 935
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 180/273 (65%), Gaps = 18/273 (6%)
Query: 59 KEGKLKQVEAEEYEENEGGKE--FFEDAPPV-----------EENSSFHQMNLSRPLLKA 105
+E Q +++E E E K+ FF + P + +SSF LSRPLL+A
Sbjct: 281 QESNSSQDDSDEETEQEKAKKAAFFAEEPTTTISKSKSSATTDADSSFTSFQLSRPLLRA 340
Query: 106 IGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRD----DQ 161
+ L++ PTPIQ+ TIP+AL G+DI A TG+GKTAAFM+P +ERL ++ +
Sbjct: 341 LTTLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKSRTPLQA 400
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
+RVL+L PTREL +Q Y V + +A+FT + L VGGL VK QE+ L+ P++VIATPG
Sbjct: 401 KSRVLILAPTRELAIQCYSVGKNIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIATPG 460
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR-TRQTMLFSATMTD 280
RL+DH+ N+ SF+L DIE+LV+DEADRML + FA ++ EI++ C + RQTMLFSATMTD
Sbjct: 461 RLIDHVRNSASFTLDDIEILVMDEADRMLQDGFADELNEIVKSCPKGARQTMLFSATMTD 520
Query: 281 AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
V LV +SL RPVR+FVD A L QEFV
Sbjct: 521 DVEQLVRLSLKRPVRLFVDPKRTTAKKLVQEFV 553
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/252 (51%), Positives = 174/252 (69%), Gaps = 13/252 (5%)
Query: 75 EGGKEFFEDAP-PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
E +E+F+DAP E SSF +++LSRPLLKA+ +L +I PT IQ+ IPVAL G+D+C
Sbjct: 96 EKEREYFDDAPVQSAETSSFQELHLSRPLLKAVSSLGFIKPTVIQSMVIPVALQGKDVCA 155
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
+ TG+GKTAAF LPILERLLY+PR TRVLVL PTREL VQ + + +LA FT +
Sbjct: 156 SSRTGSGKTAAFALPILERLLYRPRRVAATRVLVLTPTRELAVQAHAMMEKLAAFTDIRC 215
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
+ +GG++ ++QE+ LRK PD+V+ATPGR++DHL N P +E+LVLDEADR+L+
Sbjct: 216 YIVIGGVKNQLQETELRKKPDVVVATPGRMIDHLRNAPGIGFEALEILVLDEADRLLEMG 275
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD------------NN 301
F +++E++++C + RQTMLFSATMT V+ L + SL RPVRV D N
Sbjct: 276 FTEEVQELVKMCPQQRQTMLFSATMTHDVDKLAAFSLRRPVRVTADGSIRTDETQGTLNK 335
Query: 302 HEVALNLRQEFV 313
V +L QEFV
Sbjct: 336 VAVPSSLLQEFV 347
>gi|401624697|gb|EJS42747.1| drs1p [Saccharomyces arboricola H-6]
Length = 747
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 174/242 (71%), Gaps = 4/242 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F+ ++LSRP+LK + +L Y+ P+PIQ+ATIP+ALLG+DI A TG+GKTAAFM+PI
Sbjct: 225 HGNFNTLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPI 284
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF-TSVEVALSVGGLEVKVQESV 208
+ERLLYKP TRV+VL+PTREL +QV V +Q+A+F + L+VGGL ++ QE +
Sbjct: 285 IERLLYKPAKIAATRVIVLLPTRELAIQVADVGKQIARFLPGITFGLAVGGLNLRQQEQL 344
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEADRML+E F ++ EI+ L
Sbjct: 345 LKTRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELSEIMGLLPSN 404
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LYN 325
RQ +LFSATM + LVS+SL RPVR+ +D + A L QEFV D ++ L+N
Sbjct: 405 RQNLLFSATMNSKIKSLVSLSLKRPVRIMIDPPKQAAARLTQEFVRIRKRDHLKPSLLFN 464
Query: 326 VL 327
++
Sbjct: 465 LI 466
>gi|357152627|ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
[Brachypodium distachyon]
Length = 780
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 171/243 (70%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF ++N+SRPLL+A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP+L
Sbjct: 175 NSFLELNISRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 234
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ RVL+L PTREL QV+ + +LAQFT + L VGGL KVQE LR
Sbjct: 235 ERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALR 294
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL N+ S L D+ +L+LDEADR+L+ F+ ++ E+IR+C + RQ
Sbjct: 295 SNPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSVEINELIRMCPKRRQ 354
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
TMLFSATMT+ +++LV +SL +PVR+ D + + L +E V E VL +
Sbjct: 355 TMLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEVVRIRRSREANQEAVLLAL 414
Query: 331 LLR 333
L+
Sbjct: 415 CLK 417
>gi|346324903|gb|EGX94500.1| ATP-dependent RNA helicase (Drs1), putative [Cordyceps militaris
CM01]
Length = 769
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/316 (44%), Positives = 200/316 (63%), Gaps = 24/316 (7%)
Query: 1 DDSSDEEGNKED---KEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRL 57
D+ + GN+E+ +ED S+ D V E A PDD+ +L Q+
Sbjct: 179 DEETKGNGNEENGDKQEDGAASDNDSVATPE--AHPDDD----------ELSETSDQEDA 226
Query: 58 AKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPI 117
+E K A E E+ +GGKE + SSF M+LSRP+L+ + + + PTPI
Sbjct: 227 EEEAKRVAFFAPE-EKPKGGKE--------AKISSFQAMSLSRPILRGLTNVGFTKPTPI 277
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q+ TIP+AL+G+DI G A TG+GKT AF++PILERLLY+P+ TRV+VL PTREL +Q
Sbjct: 278 QSKTIPIALMGKDIVGGAVTGSGKTGAFIIPILERLLYRPKKIPTTRVVVLTPTRELAIQ 337
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
+ V +LA T ++ L+VGGL +KVQE+ LR PD++IATPGR +DH+ N+ SF +
Sbjct: 338 CHAVATKLAAHTDIKFTLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSASFPIDT 397
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT V+ L+ + + +P RV
Sbjct: 398 VEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSTVDRLIRLGMNKPARVM 457
Query: 298 VDNNHEVALNLRQEFV 313
VD+ L QEFV
Sbjct: 458 VDSQKRTVGTLVQEFV 473
>gi|357152629|ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
[Brachypodium distachyon]
Length = 770
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 171/243 (70%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF ++N+SRPLL+A AL Y PTPIQAA IP+AL GRDICG A TG+GKTAAF LP+L
Sbjct: 165 NSFLELNISRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 224
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ RVL+L PTREL QV+ + +LAQFT + L VGGL KVQE LR
Sbjct: 225 ERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALR 284
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR++DHL N+ S L D+ +L+LDEADR+L+ F+ ++ E+IR+C + RQ
Sbjct: 285 SNPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSVEINELIRMCPKRRQ 344
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
TMLFSATMT+ +++LV +SL +PVR+ D + + L +E V E VL +
Sbjct: 345 TMLFSATMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEVVRIRRSREANQEAVLLAL 404
Query: 331 LLR 333
L+
Sbjct: 405 CLK 407
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 177/254 (69%), Gaps = 7/254 (2%)
Query: 67 EAEEYEENEGGKEFFE-DAPPVEENS------SFHQMNLSRPLLKAIGALNYIYPTPIQA 119
++E+ EE EFF D VE S SF ++LSRP+L+ + ++ + PTPIQ
Sbjct: 262 DSEDDEEIRKQNEFFAPDEQAVESKSNSGAPASFQNLSLSRPILRGLASVGFSTPTPIQR 321
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKTAAF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 322 KTIPVALLGKDVVGGAVTGSGKTAAFIVPILERLLYRPRKVPTSRVAILMPTRELAVQCY 381
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E
Sbjct: 382 NVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLE 441
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+L+LDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ V L +P+R+ VD
Sbjct: 442 ILILDEADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTSSVDKLIRVGLNKPIRLMVD 501
Query: 300 NNHEVALNLRQEFV 313
+ + L QEFV
Sbjct: 502 SKKQTVGTLVQEFV 515
>gi|443897915|dbj|GAC75254.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 909
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/246 (52%), Positives = 171/246 (69%), Gaps = 12/246 (4%)
Query: 80 FFEDAPPVEE--------NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
FF D P SSF +LSRP+L+A+ +L++ PTPIQ+ TIP+AL G+DI
Sbjct: 299 FFADEPSTSAKAKASDAAESSFASFSLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDI 358
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPR---DDQNTRVLVLVPTRELGVQVYQVTRQLAQF 188
A TG+GKTAAFM+P +ERL ++ + + +RVL+L PTREL +Q Y V + +A+F
Sbjct: 359 VAGAVTGSGKTAAFMIPAIERLTWRAKGRAQEAKSRVLILAPTRELAIQCYSVGKSIAKF 418
Query: 189 TSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADR 248
T + L VGGL VK QE+ L+ P++VIATPGRL+DH+ N+ SF+L DIE+LV+DEADR
Sbjct: 419 TDIRFCLCVGGLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADR 478
Query: 249 MLDEHFASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
ML++ FA ++ EI++ C + RQTMLFSATMTD V LV +SL RPVR+FVD A
Sbjct: 479 MLEDGFADELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKRPVRLFVDPKRTTAKK 538
Query: 308 LRQEFV 313
L QEFV
Sbjct: 539 LVQEFV 544
>gi|402077170|gb|EJT72519.1| ATP-dependent RNA helicase DRS1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 827
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 171/241 (70%), Gaps = 5/241 (2%)
Query: 78 KEFFEDAPPVEEN-----SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
K+FF P E +SF M+LSRP+L+ + ++ + PTPIQA IP+AL+G+D+
Sbjct: 265 KDFFAAEEPKAEKGKGGAASFQGMSLSRPILRGLASVGFGKPTPIQAKAIPMALMGKDVV 324
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKT AFM+PILERLLY+P+ +RV+VL PTREL +Q + V +LA T ++
Sbjct: 325 GGAQTGSGKTGAFMVPILERLLYRPKKVPTSRVVVLTPTRELAIQCHAVAIKLASHTDIK 384
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
L+VGGL +KVQE+ LR PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++
Sbjct: 385 FCLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLED 444
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
FA ++ EI+ ++RQTMLFSATMT +V+ L+ L +PVR+ VD+ + L QEF
Sbjct: 445 GFADELNEILTTLPKSRQTMLFSATMTSSVDTLIRAGLNKPVRIMVDSQKKTVGTLVQEF 504
Query: 313 V 313
V
Sbjct: 505 V 505
>gi|50419843|ref|XP_458454.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
gi|74659385|sp|Q6BTL5.1|DRS1_DEBHA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49654120|emb|CAG86536.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
Length = 771
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/235 (52%), Positives = 169/235 (71%), Gaps = 2/235 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F + LSRP+LK + L Y P+PIQ+A IP+ALLG+DI A TG+GKTAA+M+PI
Sbjct: 257 HTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPI 316
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF-TSVEVALSVGGLEVKVQESV 208
+ERLLYKP +TRV+VL PTREL +QV V +++ QF ++ L+VGGL ++ QE
Sbjct: 317 IERLLYKPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQ 376
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR- 267
L+ PDIVIATPGRL+DH+ N+PSFS+ +EVLV+DEADRMLDE F +++ EI+ L R
Sbjct: 377 LKTRPDIVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEILSLIPRH 436
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
RQT+L+SATM + DL+ +SL +PVRV +D A+ L QEFV D ++
Sbjct: 437 KRQTLLYSATMNTKIQDLIQLSLQKPVRVMIDPPKSAAIKLVQEFVRIRKRDHLK 491
>gi|322692214|gb|EFY84155.1| dependent RNA helicase drs-1 [Metarhizium acridum CQMa 102]
Length = 780
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 176/250 (70%), Gaps = 5/250 (2%)
Query: 69 EEYEENEGGKEFF-----EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIP 123
E+ EE EFF + + + + SSF M+LSRP+L+ + A+ + PTPIQA TIP
Sbjct: 226 EDAEEQAKRDEFFAPEERQKSDKIVDLSSFQGMSLSRPILRGLAAVGFTKPTPIQAKTIP 285
Query: 124 VALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTR 183
+AL+G+D+ G A TG+GKT AF +PILERLL++P+ TRV+VL PTREL +Q + V
Sbjct: 286 IALMGKDLVGGAVTGSGKTGAFFVPILERLLFRPKKIPTTRVVVLTPTRELAMQCHDVGT 345
Query: 184 QLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVL 243
+LA++T ++ +L+VGGL +K QE LR PDI++ATPGR +DH+ N+ SF++ +E+LVL
Sbjct: 346 KLARYTDIKFSLAVGGLSLKAQEVELRLRPDIIVATPGRFIDHMRNSASFNVDTVEILVL 405
Query: 244 DEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
DEADRML++ FA ++ EI+ ++RQTMLFSATMT V+ L+ L +PVR+ VD+ +
Sbjct: 406 DEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSTVDRLIRAGLNKPVRLMVDSQKK 465
Query: 304 VALNLRQEFV 313
L QEFV
Sbjct: 466 TVTTLVQEFV 475
>gi|254578822|ref|XP_002495397.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
gi|238938287|emb|CAR26464.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
Length = 750
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/256 (49%), Positives = 175/256 (68%), Gaps = 10/256 (3%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A + E E K+ F ++F+ ++LSRP+LKA+G L Y P+PIQ ATIP+ALL
Sbjct: 223 APQSESEEAKKKVF---------NNFNSLSLSRPVLKALGDLGYATPSPIQGATIPIALL 273
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G+DI A TG+GKTAAFM+PI+ERL+YKP +TRV+VL PTREL +QV V ++L +
Sbjct: 274 GKDIIAGAVTGSGKTAAFMIPIIERLIYKPAKVASTRVIVLAPTRELAIQVADVGKKLGK 333
Query: 188 FTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
+ + + ++VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SF++ +EVLV+DEA
Sbjct: 334 YVNGLTFGIAVGGLNLRQQEQILKTRPDIVIATPGRFIDHIRNSSSFNVDSVEVLVIDEA 393
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DRML+E F ++ EI+ L RQTMLFSATM + LVS+SL RPVRV D +
Sbjct: 394 DRMLEEGFQDEINEIMHLLPSKRQTMLFSATMNSKIKQLVSLSLKRPVRVMTDPPQQAVS 453
Query: 307 NLRQEFVSFSNIDEVR 322
L+QEFV D ++
Sbjct: 454 KLQQEFVRIRKRDHLK 469
>gi|429859431|gb|ELA34212.1| ATP-dependent RNA helicase drs1 [Colletotrichum gloeosporioides
Nara gc5]
Length = 772
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 166/223 (74%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF M+LSRPLL+ + A+ + PTPIQA T+P+AL+G+D+ G A TG+GKTAAF++PIL
Sbjct: 249 SSFQGMSLSRPLLRGLAAVGFSKPTPIQAKTVPIALMGKDVVGGAVTGSGKTAAFVVPIL 308
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ +RV++L PTREL +Q + V +LA +T ++ L+VGGL +K QE LR
Sbjct: 309 ERLLYRPKKVPTSRVVILTPTRELAIQCHAVATKLAAYTDIKFTLAVGGLSLKQQEVELR 368
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++RQ
Sbjct: 369 LRPDVIIATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQ 428
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT +V+ LV V + +P RV VD+ + L QEF+
Sbjct: 429 TMLFSATMTSSVDRLVRVGMNKPARVMVDSQKKTVGTLVQEFI 471
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 172/253 (67%), Gaps = 6/253 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENS------SFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E+ E E K FF N SF +LSRP+L+ + ++ + PTPIQ
Sbjct: 274 ESEDAAEIEKQKSFFAPEEKASANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRK 333
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV++L+PTREL VQ Y
Sbjct: 334 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVVILMPTRELAVQCYN 393
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 394 VATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 453
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT+ V+ L+ V L RPVR+ VD
Sbjct: 454 LVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDA 513
Query: 301 NHEVALNLRQEFV 313
+ L QEFV
Sbjct: 514 KKQTVGTLIQEFV 526
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 177/254 (69%), Gaps = 7/254 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
E+E+ +E EFF V E+ +SF ++LSRP+L+ + ++ + PTPIQ
Sbjct: 266 ESEDDDEIRKQNEFFAPEEQVTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQR 325
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 326 KTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSRVAILMPTRELAVQCY 385
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E
Sbjct: 386 NVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLE 445
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT++V+ L+ V L +PVR+ VD
Sbjct: 446 ILVLDEADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVD 505
Query: 300 NNHEVALNLRQEFV 313
+ + L QEFV
Sbjct: 506 SKKQTVGTLVQEFV 519
>gi|357459393|ref|XP_003599977.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355489025|gb|AES70228.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 828
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 169/238 (71%), Gaps = 7/238 (2%)
Query: 67 EAEEYEENEGG--KEFFEDAPPVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
E E+ E+ G K FF AP + SF Q+NLSRPLL+A L Y PTPIQAA
Sbjct: 124 EEEDEEDGNAGENKSFF--APSAGTSFSADSFLQLNLSRPLLRACEVLGYSKPTPIQAAC 181
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP+AL GRDICG A TG+GKTAAF LP LERLL++P+ RVL+L PTREL QV +
Sbjct: 182 IPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVHAIRVLILTPTRELAAQVQSM 241
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+ L+QFT + L VGGL K QE LR PDIV+ATPGR++DHL N+ S L D+ VL
Sbjct: 242 IKSLSQFTDIRCCLIVGGLSTKEQEVALRSRPDIVVATPGRMIDHLRNSMSVDLDDLSVL 301
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LDEADR+L+ F+++++E++R+C + RQTMLFSATMT+ V+DL+ +SL++P+R+ D
Sbjct: 302 ILDEADRLLELGFSAEIQELVRVCPKKRQTMLFSATMTEEVDDLIKLSLSKPLRLSAD 359
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 176/254 (69%), Gaps = 7/254 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
E+E+ EE EFF V E +SF ++LSRP+L+ + ++ + PTPIQ
Sbjct: 268 ESEDDEEIRKQNEFFAPEEQVAEPKSASGAPASFQNLSLSRPILRGLASVGFSAPTPIQK 327
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 328 KTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSRVAILMPTRELAVQCY 387
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E
Sbjct: 388 NVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLE 447
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT++V+ L+ V L +PVR+ VD
Sbjct: 448 ILVLDEADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVD 507
Query: 300 NNHEVALNLRQEFV 313
+ + L QEFV
Sbjct: 508 SKKQTVGTLVQEFV 521
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 181/264 (68%), Gaps = 7/264 (2%)
Query: 57 LAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGAL 109
LA + + E+E+ +E EFF V E+ +SF ++LSRP+L+ + ++
Sbjct: 255 LASDEDVSGSESEDDDEIRKQNEFFAPEDQVTESKSTSGAPASFQNLSLSRPILRGLASV 314
Query: 110 NYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLV 169
+ PTPIQ TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+
Sbjct: 315 GFSTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSRVAILM 374
Query: 170 PTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHN 229
PTREL VQ Y V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N
Sbjct: 375 PTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRN 434
Query: 230 TPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVS 289
+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT++V+ L+ V
Sbjct: 435 SASFTVDTLEILVLDEADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVG 494
Query: 290 LTRPVRVFVDNNHEVALNLRQEFV 313
L +PVR+ VD+ + L QEFV
Sbjct: 495 LNKPVRLMVDSKKQTVGTLVQEFV 518
>gi|295664398|ref|XP_002792751.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278865|gb|EEH34431.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 835
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 175/253 (69%), Gaps = 6/253 (2%)
Query: 67 EAEEYEENEGGKEFF--EDAPPVEEN----SSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E+ E E K FF ED ++N SF +LSRP+L+ + ++ + PTPIQ
Sbjct: 283 ESEDAAEVEKQKAFFAPEDTTSTKDNLETAKSFQAFSLSRPILRGLTSVGFTTPTPIQRK 342
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 343 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYN 402
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 403 VATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 462
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT+ ++ L+ V L RPVR+ V+
Sbjct: 463 LVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNTIDKLIRVGLNRPVRLMVNA 522
Query: 301 NHEVALNLRQEFV 313
+ L QEFV
Sbjct: 523 QKQTVGTLVQEFV 535
>gi|212533429|ref|XP_002146871.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
gi|210072235|gb|EEA26324.1| ATP-dependent RNA helicase (Drs1), putative [Talaromyces marneffei
ATCC 18224]
Length = 826
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 162/224 (72%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N SF NLSRP+L+ + A+ + PTPIQ IPVALLG+D+ G A TG+GKT AF++PI
Sbjct: 303 NGSFQNYNLSRPILRGLAAVGFTKPTPIQRKAIPVALLGKDVVGGAVTGSGKTGAFIIPI 362
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+ R +RV +L+PTREL VQ + V +LA +T + +GG ++ QE++L
Sbjct: 363 LERLLYRQRKVPTSRVAILMPTRELAVQCFNVATKLATYTDITFCQLIGGFSLREQENIL 422
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+K PDI+IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 423 KKRPDIIIATPGRFIDHMRNSSSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSR 482
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMTD+V+ L+ V L RPVR+ VD + A L QEFV
Sbjct: 483 QTMLFSATMTDSVDKLIRVGLNRPVRLMVDAKKQTAGTLVQEFV 526
>gi|400599006|gb|EJP66710.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 768
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 170/242 (70%), Gaps = 8/242 (3%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
E+ +GGK+ E SSF M+LSRP+L+ + + + PTPIQA TIP+AL+G+D+
Sbjct: 237 EKPKGGKD--------ERVSSFQAMSLSRPILRGLTNVGFTKPTPIQAKTIPIALMGKDL 288
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF++PILERLLY+P+ TRV+VL PTREL +Q + V +LA T +
Sbjct: 289 VGGAVTGSGKTGAFIIPILERLLYRPKKVPTTRVVVLTPTRELAIQCHAVATKLAAHTDI 348
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ L+VGGL +KVQE+ LR PD++IATPGR +DH+ N+ SF + +E+LVLDEADRML+
Sbjct: 349 KFTLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSASFPIDTVEILVLDEADRMLE 408
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
+ FA ++ EI+ ++RQTMLFSATMT V+ L+ V + +P RV VD+ L QE
Sbjct: 409 DGFADELNEILTTLPKSRQTMLFSATMTSTVDRLIRVGMNKPARVMVDSQKRTVGTLVQE 468
Query: 312 FV 313
FV
Sbjct: 469 FV 470
>gi|367014751|ref|XP_003681875.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
gi|359749536|emb|CCE92664.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
Length = 740
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/267 (49%), Positives = 180/267 (67%), Gaps = 14/267 (5%)
Query: 68 AEEYEENEGGKE----FFEDAPPVEE-------NSSFHQMNLSRPLLKAIGALNYIYPTP 116
EE+ E+E E F+ AP E ++ F+ ++LSRP+LK +G L Y P+P
Sbjct: 187 GEEHSEDEDSPEEMAKFY--APEAESEQATKQVHNDFNSLSLSRPVLKGLGDLGYTRPSP 244
Query: 117 IQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGV 176
IQ+ATIP+ALLG+DI A TG+GKTAAFM+PI+ERLLYKP +TRV+VL PTREL +
Sbjct: 245 IQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLTPTRELAI 304
Query: 177 QVYQVTRQLAQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV V ++L ++ S + L+VGGL ++ QE L+ PDIV+ATPGR +DH+ N+ SF++
Sbjct: 305 QVSDVAKKLGKYVSGLTFGLAVGGLNLRQQEQSLKARPDIVVATPGRFIDHIRNSASFNV 364
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+EVLV+DEADRML+E F ++ EI+ L RQT+LFSATM + LVS++L RPVR
Sbjct: 365 DSVEVLVIDEADRMLEEGFQEELNEILSLLPSKRQTLLFSATMNSKIKQLVSLTLKRPVR 424
Query: 296 VFVDNNHEVALNLRQEFVSFSNIDEVR 322
V +D + A L QEFV D ++
Sbjct: 425 VMIDPPKQAASKLTQEFVRIRKRDHLK 451
>gi|164660112|ref|XP_001731179.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
gi|159105079|gb|EDP43965.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
Length = 638
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 169/238 (71%), Gaps = 4/238 (1%)
Query: 80 FFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
FF P E + F + L+R LL+ + ALN+ PTPIQA TIP+AL G+DI A T
Sbjct: 64 FFAKEEPKESPIPTDFTALQLNRALLRGLAALNFSRPTPIQARTIPIALAGKDIVAGAVT 123
Query: 138 GTGKTAAFMLPILERLLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
G+GKTAAF++PI+ERL Y+ R DD +RV+VL PTREL +Q + V + L +F +V L
Sbjct: 124 GSGKTAAFLIPIMERLSYRQRSADDAKSRVVVLCPTRELAIQCHSVAQALGKFMNVRFCL 183
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGGL +K+QE+ L+ PD++IATPGRL+DH+ N+ SF + D+E+LV+DEADRML++ F
Sbjct: 184 CVGGLSLKLQEAELKTRPDVIIATPGRLIDHVRNSASFGMEDVEILVMDEADRMLEDGFE 243
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ EI+RLC + RQTMLFSATMT+ V+ LV +SL PVR+FVD A L QEFV
Sbjct: 244 DELNEIVRLCPKQRQTMLFSATMTEDVDQLVRLSLRTPVRLFVDPKRSTASKLTQEFV 301
>gi|169598332|ref|XP_001792589.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
gi|118595361|sp|Q0V1Z7.1|DRS1_PHANO RecName: Full=ATP-dependent RNA helicase DRS1
gi|111069059|gb|EAT90179.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
Length = 808
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 157/223 (70%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SFH M+LSRP+ K + A+ + PTPIQA IP+A+ G+D+ G A TG+GKTAAF++PIL
Sbjct: 285 GSFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGAETGSGKTAAFLIPIL 344
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ TRV + +PTREL VQ + V +LA FT + AL GG + QE +L+
Sbjct: 345 ERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALLAGGFSSREQEVMLK 404
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD+VIATPGR +DH+HNT +F + +E+LVLDEADRML+E F +Q+ EI+ ++RQ
Sbjct: 405 TRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEILTTIPKSRQ 464
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT V+ L+ + + +PVR+ VD L QEF+
Sbjct: 465 TMLFSATMTSTVDKLIRIGMDKPVRLMVDAKKHTVKGLTQEFI 507
>gi|240274680|gb|EER38196.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H143]
Length = 828
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 171/253 (67%), Gaps = 6/253 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENS------SFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E+ E E K FF N SF +LSRP+L+ + + + PTPIQ
Sbjct: 274 ESEDAAEIEKQKSFFAPEEKASANGDLKSAKSFQAFSLSRPILRGLTFVGFTTPTPIQRK 333
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV++L+PTREL VQ Y
Sbjct: 334 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVVILMPTRELAVQCYN 393
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 394 VATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 453
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT+ V+ L+ V L RPVR+ VD
Sbjct: 454 LVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDA 513
Query: 301 NHEVALNLRQEFV 313
+ L QEFV
Sbjct: 514 KKQTVGTLIQEFV 526
>gi|154282923|ref|XP_001542257.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
gi|150410437|gb|EDN05825.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
Length = 1466
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/253 (49%), Positives = 176/253 (69%), Gaps = 6/253 (2%)
Query: 67 EAEEYEENEGGKEFF--EDAPP----VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E+ E E K FF E+ P ++ SF +LSRP+L+ + ++ + PTPIQ
Sbjct: 275 ESEDAAEIEKQKSFFAPEEKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRK 334
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 335 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYN 394
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 395 VATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 454
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT+ V+ L+ V L+RPVR+ VD
Sbjct: 455 LVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLSRPVRLMVDA 514
Query: 301 NHEVALNLRQEFV 313
+ L QEFV
Sbjct: 515 KKQTVGTLIQEFV 527
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 160/237 (67%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SF M+LSRP+L+ + A+ + PTPIQ IP+A+ G+D+ G A TG+GKTAAF++PIL
Sbjct: 280 GSFQAMSLSRPILRGLAAVGFSEPTPIQNKAIPIAMQGKDVVGGAETGSGKTAAFLIPIL 339
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ TRV + +PTREL VQ + V +LA FT + AL GG K QE+VL+
Sbjct: 340 ERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALMAGGFSTKDQEAVLK 399
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD+VIATPGR +DH+HNT +F + +E+LVLDEADRML+E F SQ+ EI+ ++RQ
Sbjct: 400 TRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEILTTIPKSRQ 459
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
TMLFSATMT V+ L+ + + +PVR+ VD L QEF+ E R L
Sbjct: 460 TMLFSATMTSTVDRLIRIGMDKPVRLMVDAKKHTVKGLTQEFIRLRQGKEDRRLAYL 516
>gi|344299490|gb|EGW29843.1| hypothetical protein SPAPADRAFT_157925 [Spathaspora passalidarum
NRRL Y-27907]
Length = 553
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/235 (51%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F + LSRP+LK + L Y+ P+PIQ+A+IP+ALLG+DI A TG+GKTAA+M+PI
Sbjct: 39 HTTFQTLQLSRPVLKGLAQLGYVKPSPIQSASIPIALLGKDIVAGAQTGSGKTAAYMIPI 98
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF-TSVEVALSVGGLEVKVQESV 208
+ERLLYKP +TRV+VL PTREL +QV V ++L+QF ++ L+VGGL ++ QE
Sbjct: 99 IERLLYKPSKVPSTRVIVLTPTRELAIQVCDVGKKLSQFINNLNFGLAVGGLNLRQQELQ 158
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR- 267
L+ PDIVIATPGRL+DH+ N+PSFS+ ++EVLV+DEADRMLDE F +++ EI+ L +
Sbjct: 159 LKSRPDIVIATPGRLIDHIRNSPSFSIDNLEVLVIDEADRMLDEGFQAELTEILSLIPKY 218
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
RQT+LFSATM + DL+ +SL +PVR+ +D A L QEF+ D ++
Sbjct: 219 KRQTLLFSATMNTKIQDLIQLSLQKPVRIMIDPPKTAASKLIQEFIRIRKRDHLK 273
>gi|71018173|ref|XP_759317.1| hypothetical protein UM03170.1 [Ustilago maydis 521]
gi|74701966|sp|Q4P9P3.1|DRS1_USTMA RecName: Full=ATP-dependent RNA helicase DRS1
gi|46099167|gb|EAK84400.1| hypothetical protein UM03170.1 [Ustilago maydis 521]
Length = 932
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 167/228 (73%), Gaps = 5/228 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF +LSRP+L+A+ +L++ PTPIQ+ TIP+AL G+DI A TG+GKTAAFM+P +
Sbjct: 333 SSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTI 392
Query: 151 ERLLYKPR----DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
ERL ++ + + +RVL+L PTREL +Q Y V + +A+FT + L VGGL VK QE
Sbjct: 393 ERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQE 452
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+ L+ P++VIATPGRL+DH+ N+ SF+L DIE+LV+DEADRML++ FA ++ EI++ C
Sbjct: 453 AELKLRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVKSCP 512
Query: 267 R-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ RQTMLFSATMTD V LV +SL RPVR+FVD A L QEFV
Sbjct: 513 KGARQTMLFSATMTDDVEQLVRLSLKRPVRLFVDPKRTTAKKLIQEFV 560
>gi|440799062|gb|ELR20123.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 762
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 173/240 (72%), Gaps = 3/240 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++LSR LLKA+ L Y PTP+Q+ IP+AL G+D+C A TG+GKTA+F+LPILE
Sbjct: 194 SFLDLHLSRALLKAVANLGYDRPTPVQSQAIPIALQGKDVCASATTGSGKTASFVLPILE 253
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL+++ + TRV++L PTREL +Q + V +LA+FT + L VGGL KVQE+ LR+
Sbjct: 254 RLIHRDKRIMATRVVILTPTRELAIQCHSVIEKLAKFTDITACLVVGGLSNKVQEAALRR 313
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDIV+ATPGR++DHL N SF+L +++LVLDEADR+L FA ++++II+ C RQT
Sbjct: 314 HPDIVVATPGRIIDHLRNAQSFTLETVDILVLDEADRLLSLGFADELEQIIKFCPPNRQT 373
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLML 331
+LFSATMT+ V+ L S+SL RPVRV +D N VA ++QEF+ I E R ++ ++L
Sbjct: 374 LLFSATMTEEVDRLASLSLNRPVRVRLDPNMRVASGIQQEFI---KIKEAREFDRDAMLL 430
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 158/224 (70%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SF M+LSRP+L+ + ++ + PTPIQ +P+A+ G+D+ G A TG+GKTAAF++PI
Sbjct: 274 TGSFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAMQGKDVVGGAETGSGKTAAFLIPI 333
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+P+ TRV + +PTREL VQ + V +LA FT + AL GG + QE+VL
Sbjct: 334 LERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALMAGGFSTRDQEAVL 393
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+ PD+VIATPGR +DH+HNT +F + +E+LVLDEADRML+E F SQ+ EI+ ++R
Sbjct: 394 KTRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEILTTIPKSR 453
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMT +V+ L+ + + +PVR+ VD L QEFV
Sbjct: 454 QTMLFSATMTSSVDKLIRIGMDKPVRLMVDAKKHTVAGLTQEFV 497
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 177/254 (69%), Gaps = 7/254 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
E+E+ +E EFF + E+ +SF ++LSRP+L+ + ++ + PTPIQ
Sbjct: 266 ESEDDDEIRKQNEFFAPEEGMTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQR 325
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 326 KTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSRVAILMPTRELAVQCY 385
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E
Sbjct: 386 NVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLE 445
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT++V+ L+ V L +PVR+ VD
Sbjct: 446 ILVLDEADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTNSVDKLIRVGLNKPVRLMVD 505
Query: 300 NNHEVALNLRQEFV 313
+ + L QEFV
Sbjct: 506 SKKQTVGTLVQEFV 519
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 184/269 (68%), Gaps = 11/269 (4%)
Query: 69 EEYEENEGGKEFF------EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATI 122
+E + E E+F EDA + +++F+ +NLSRP+LK + +L + P+PIQ+ATI
Sbjct: 187 KETDSAEAVAEYFAPEEEAEDAKK-QTHTTFNTLNLSRPVLKGLSSLGFTKPSPIQSATI 245
Query: 123 PVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVT 182
P+ALLG+DI A TG+GKTAAFM+PI+ERLLYKP +TRV++L PTREL +Q+ V
Sbjct: 246 PIALLGKDIVAGAVTGSGKTAAFMIPIIERLLYKPAKVASTRVVILTPTRELAIQISDVA 305
Query: 183 RQLAQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+++ F + + L+VGGL ++ QE +L+ PDIVIATPGR +DH+ N+ SFS+ +E+L
Sbjct: 306 KKIGHFVNGLTFGLAVGGLNLRQQEQILKSRPDIVIATPGRFIDHVRNSASFSVDRVEIL 365
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADRML+E F ++ EI+ L RQ +LFSATM + LVS+SL +PVR+ +D
Sbjct: 366 VLDEADRMLEEGFQDELSEIMTLLPTRRQNLLFSATMNSKIKQLVSLSLKKPVRIMIDPP 425
Query: 302 HEVALNLRQEFVSFSNIDEVR---LYNVL 327
+ A L QEFV D ++ LYN++
Sbjct: 426 KQAADRLVQEFVRIRKRDHLKPALLYNLI 454
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 158/224 (70%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SF M+LSRP+L+ + ++ + PTPIQ +P+A+ G+D+ G A TG+GKTAAF++PI
Sbjct: 274 TGSFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAMQGKDVVGGAETGSGKTAAFLIPI 333
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+P+ TRV + +PTREL VQ + V +LA FT + AL GG + QE+VL
Sbjct: 334 LERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALMAGGFSTRDQEAVL 393
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+ PD+VIATPGR +DH+HNT +F + +E+LVLDEADRML+E F SQ+ EI+ ++R
Sbjct: 394 KTRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEILTTIPKSR 453
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMT +V+ L+ + + +PVR+ VD L QEFV
Sbjct: 454 QTMLFSATMTSSVDKLIRIGMDKPVRLMVDAKKHTVAGLTQEFV 497
>gi|50311527|ref|XP_455788.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660268|sp|Q6CJV1.1|DRS1_KLULA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49644924|emb|CAG98496.1| KLLA0F15752p [Kluyveromyces lactis]
Length = 748
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 172/242 (71%), Gaps = 4/242 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F+ ++LSRP+LK +G+L Y P+PIQ+A IP+ALLG+DI A TG+GKTAAFM+PI
Sbjct: 232 HKTFNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPI 291
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQESV 208
+ERLLYKP +TRV+VL PTREL +QV V + + +F + + L+VGGL ++ QE
Sbjct: 292 IERLLYKPAHIASTRVVVLTPTRELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQQEQA 351
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L+ PDIVIATPGR +DHL N+ SFS+ +E+LV+DEADRML+E F +++EI+ L
Sbjct: 352 LKTRPDIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEELQEIMSLIPSK 411
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LYN 325
RQT+LFSATM + L+S+SL +PVR+ +D + A L QEF+ D ++ LY
Sbjct: 412 RQTLLFSATMNSKIKQLISLSLKKPVRIMIDPPKQAADKLTQEFIRIRKRDHLKPALLYQ 471
Query: 326 VL 327
++
Sbjct: 472 LI 473
>gi|380487114|emb|CCF38253.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 777
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 175/240 (72%), Gaps = 6/240 (2%)
Query: 80 FF---EDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGC 134
FF E A P +++ SSF M+LSRPLL+ + A+ + PTPIQA T+P+AL+G+D+ G
Sbjct: 236 FFAPEEPAKPGKKDTASSFQAMSLSRPLLRGLAAVGFSKPTPIQAKTVPIALMGKDVVGG 295
Query: 135 AATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVA 194
A TG+GKTAAF++PILERLLY+P+ +RV++L PTREL +Q + V +LA +T ++
Sbjct: 296 AVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILTPTRELAIQCHAVATKLAAYTDIKFT 355
Query: 195 LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHF 254
L+VGGL +K QE LR PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ F
Sbjct: 356 LAVGGLSLKAQEVELRLRPDVIIATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGF 415
Query: 255 ASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN-NHEVALNLRQEFV 313
A ++ EI+ ++RQTMLFSATMT +V+ LV V + +P RV VD+ ++ L QEFV
Sbjct: 416 ADELNEILTTLPKSRQTMLFSATMTSSVDKLVRVGMNKPARVMVDSQKNKTVGTLVQEFV 475
>gi|261189897|ref|XP_002621359.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
gi|239591595|gb|EEQ74176.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
Length = 834
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 163/227 (71%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
+E SF +LSRP+L+ + ++ + PTPIQ TIPVALLG+D+ G A TG+GKT AF+
Sbjct: 307 LEPAKSFQAFSLSRPILRGLTSVGFTTPTPIQQKTIPVALLGKDVVGGAVTGSGKTGAFI 366
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+PILERLLY+PR +RV +L+PTREL VQ Y V +LA FT + VGG ++ QE
Sbjct: 367 IPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQE 426
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
++L+K PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+
Sbjct: 427 NILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP 486
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++RQTMLFSATMT+ V+ L+ V L RPVR+ VD + L QEFV
Sbjct: 487 KSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVGTLVQEFV 533
>gi|327352045|gb|EGE80902.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 834
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 163/227 (71%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
+E SF +LSRP+L+ + ++ + PTPIQ TIPVALLG+D+ G A TG+GKT AF+
Sbjct: 307 LEPAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFI 366
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+PILERLLY+PR +RV +L+PTREL VQ Y V +LA FT + VGG ++ QE
Sbjct: 367 IPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQE 426
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
++L+K PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+
Sbjct: 427 NILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP 486
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++RQTMLFSATMT+ V+ L+ V L RPVR+ VD + L QEFV
Sbjct: 487 KSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVGTLVQEFV 533
>gi|239612877|gb|EEQ89864.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ER-3]
Length = 834
Score = 259 bits (663), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 163/227 (71%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
+E SF +LSRP+L+ + ++ + PTPIQ TIPVALLG+D+ G A TG+GKT AF+
Sbjct: 307 LEPAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFI 366
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+PILERLLY+PR +RV +L+PTREL VQ Y V +LA FT + VGG ++ QE
Sbjct: 367 IPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLREQE 426
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
++L+K PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+
Sbjct: 427 NILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP 486
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++RQTMLFSATMT+ V+ L+ V L RPVR+ VD + L QEFV
Sbjct: 487 KSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDAKKQTVGTLVQEFV 533
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 170/253 (67%), Gaps = 6/253 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENS------SFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E+ E E K FF N SF +LSRP+L+ + ++ + PTPIQ
Sbjct: 275 ESEDAAEIEKQKSFFAPEEKASANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRK 334
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 335 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYN 394
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 395 VATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 454
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ F ++ EI+ ++RQTMLFSATMT+ V+ L+ V L RPVR+ VD
Sbjct: 455 LVLDEADRMLEDGFTDELNEILTTIPKSRQTMLFSATMTNNVDKLIRVGLNRPVRLMVDA 514
Query: 301 NHEVALNLRQEFV 313
+ L QEFV
Sbjct: 515 KKQTVGTLIQEFV 527
>gi|346978687|gb|EGY22139.1| ATP-dependent RNA helicase DRS1 [Verticillium dahliae VdLs.17]
Length = 748
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 166/223 (74%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF M+LSRP+L+ + +++ PTPIQ TIP+AL+G+D+ G A TG+GKTAAF++PIL
Sbjct: 219 NSFQAMSLSRPILRGLAGVSFTKPTPIQQKTIPIALMGKDLVGGAVTGSGKTAAFVVPIL 278
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+P+ +RV++L PTREL +Q + V +LA +T ++ L+VGGL +K+QE+ LR
Sbjct: 279 ERLLYRPKKVPTSRVVILTPTRELAIQCHSVATKLAAYTDIKFTLAVGGLSLKMQEAELR 338
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++RQ
Sbjct: 339 LRPDVIIATPGRFIDHMRNSASFAVDAVEILVLDEADRMLEDGFADELNEILTSMPKSRQ 398
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT +V+ L+ V + P RV VD+ + L QEF+
Sbjct: 399 TMLFSATMTSSVDRLIRVGMNTPARVMVDSQKKTVTTLTQEFI 441
>gi|255079330|ref|XP_002503245.1| predicted protein [Micromonas sp. RCC299]
gi|226518511|gb|ACO64503.1| predicted protein [Micromonas sp. RCC299]
Length = 605
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 157/211 (74%), Gaps = 1/211 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F ++NLSRPL+KA GAL Y PTPIQAA +P+AL GRDICG A TG+GKTAAFMLP L
Sbjct: 150 ANFTELNLSRPLVKACGALGYASPTPIQAAVVPLALTGRDICGRAVTGSGKTAAFMLPCL 209
Query: 151 ERLLYK-PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
ER+L++ P+ T VLVLVPTREL VQV+Q+T +LAQFTSV AL VGGL VQ + L
Sbjct: 210 ERMLHRGPKPVAATHVLVLVPTRELAVQVHQMTERLAQFTSVRAALVVGGLSANVQATSL 269
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R P++V+ATPGRL+DH+ NT S L D+ LVLDEADR+L+ F +++EI+R C + R
Sbjct: 270 RSRPEVVVATPGRLIDHVRNTHSVGLEDLATLVLDEADRLLEMGFLEEIREIVRHCPKRR 329
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
QTMLFSAT+T V +L S+ P R+ D
Sbjct: 330 QTMLFSATLTSGVEELAEFSMKNPARLSADQ 360
>gi|367049970|ref|XP_003655364.1| hypothetical protein THITE_2119013 [Thielavia terrestris NRRL 8126]
gi|347002628|gb|AEO69028.1| hypothetical protein THITE_2119013 [Thielavia terrestris NRRL 8126]
Length = 755
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/318 (44%), Positives = 202/318 (63%), Gaps = 32/318 (10%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEG 61
D ++ G+ ED+E+ S++D V A P + H + + ++ + AK
Sbjct: 163 DVEEDGGSGEDEEEQSASDDDSV------ATP---VPHPDDVESSEDDEEEDAEEEAKR- 212
Query: 62 KLKQVEAEEYEENEGGKEFF----EDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPT 115
KEFF E P ++ SSF + LSRPLL+A+ ++ + PT
Sbjct: 213 ----------------KEFFAAPEETEKPAKKGKLSSFLDLPLSRPLLRALTSVGFDEPT 256
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQA TIP+AL+G+D+ G A TG+GKTAAFM+PILERLL++P TRV++L PTREL
Sbjct: 257 PIQAKTIPIALMGKDVVGGAVTGSGKTAAFMVPILERLLHRPNKVPTTRVVILTPTRELA 316
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
+Q + V +LA+FT ++ L+ GGL KVQE+ LR PD+VIATPGR +DH+ N+ SF++
Sbjct: 317 MQCHAVATKLARFTDIKFCLAAGGLSRKVQEAELRLRPDVVIATPGRFIDHMRNSASFAV 376
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V++L+ V L +PVR
Sbjct: 377 DRVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDNLIRVGLNKPVR 436
Query: 296 VFVDNNHEVALNLRQEFV 313
+ VD+ A L QEFV
Sbjct: 437 IMVDSQKATAGTLTQEFV 454
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 175/254 (68%), Gaps = 7/254 (2%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEE-------NSSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
E+E+ +E EFF V E +SF ++LSRP+L+ + ++ + PTPIQ
Sbjct: 265 ESEDDDEIRKQNEFFAPEEQVTELKSTSRAPASFQNLSLSRPILRGLASVGFSTPTPIQR 324
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 325 KTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSRVAILMPTRELAVQCY 384
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E
Sbjct: 385 NVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLE 444
Query: 240 VLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ + L +PVR+ VD
Sbjct: 445 ILVLDEADRMLEDGFAEELNEILTTIPKSRQTMLFSATMTSSVDKLIRLGLNKPVRLMVD 504
Query: 300 NNHEVALNLRQEFV 313
+ + L QEFV
Sbjct: 505 SKKQTVGTLVQEFV 518
>gi|452986589|gb|EME86345.1| hypothetical protein MYCFIDRAFT_202484 [Pseudocercospora fijiensis
CIRAD86]
Length = 756
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 161/223 (72%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++FH MNLSR +LK + A+ + PTPIQA TIPVAL G+D+ G A TG+GKTAAF++PIL
Sbjct: 234 TAFHSMNLSRQILKGLAAVGFDKPTPIQAKTIPVALEGKDLVGGAVTGSGKTAAFLIPIL 293
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLLY+PR+ TRV +L+PTREL +Q + V ++LA T + ++GGL + QE L+
Sbjct: 294 ERLLYRPRNAATTRVAILMPTRELALQCFNVAKKLAAHTDITFGQAIGGLNSREQEKQLK 353
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIVIATPGR +D N+ SF+++ IE+LVLDEADRML+E FA ++ EI+ ++RQ
Sbjct: 354 LRPDIVIATPGRFIDLERNSASFAVNTIEILVLDEADRMLEEGFADELNEILTKIPKSRQ 413
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT V+DL+ V + RPVR+ VD L QEFV
Sbjct: 414 TMLFSATMTSKVDDLIRVGMQRPVRLMVDAQKATVSGLVQEFV 456
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 161/222 (72%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF M+LSRP+L+ + ++ + PTPIQ+ +P+A+ G+D+ G A TG+GKTAAF++PILE
Sbjct: 290 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAMQGKDVVGGAETGSGKTAAFLIPILE 349
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+ + TRV + +PTREL VQ + V +LA FT + AL GG + QE+VL+
Sbjct: 350 RLLYRQKKIPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALMAGGFSSREQEAVLKT 409
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD+VIATPGR +DH+HNT +F + ++E+LVLDEADRML+E F SQ+ EI+ ++RQT
Sbjct: 410 RPDVVIATPGRFIDHMHNTAAFQVENLEILVLDEADRMLEEGFESQLNEILTTIPKSRQT 469
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATMT +V+ L+ + + +PVR+ VD+ + L QEFV
Sbjct: 470 MLFSATMTSSVDKLIRIGMDKPVRLMVDSKKQTVKGLTQEFV 511
>gi|398407733|ref|XP_003855332.1| hypothetical protein MYCGRDRAFT_99289 [Zymoseptoria tritici IPO323]
gi|339475216|gb|EGP90308.1| hypothetical protein MYCGRDRAFT_99289 [Zymoseptoria tritici IPO323]
Length = 740
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 162/223 (72%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F MNLSRP+LK + A+ + PTPIQA TIPVAL G+D+ G A TG+GKT AF++PIL
Sbjct: 226 TAFSTMNLSRPILKGLAAVGFNTPTPIQAKTIPVALEGKDLVGGAVTGSGKTGAFLIPIL 285
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P+ TRV++L+PTREL +Q + V ++LA FT + ++GGL + QE L+
Sbjct: 286 ERLLFRPKRTATTRVVILMPTRELALQCFAVAKKLASFTDITFGQAIGGLNSREQEKQLK 345
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIVIATPGR +D N+ SF++S +E+LVLDEADRML+E FA ++ EI+ ++RQ
Sbjct: 346 LRPDIVIATPGRFIDLERNSASFTVSTVEILVLDEADRMLEEGFADELNEILNKIPKSRQ 405
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMLFSATMT V+DL+ V L RPVR+ VD + L QEFV
Sbjct: 406 TMLFSATMTSKVDDLIRVGLQRPVRLLVDAQRQTVSGLVQEFV 448
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 169/240 (70%), Gaps = 4/240 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F+ ++LSRP+LK + L Y P+PIQ+ATIPVAL G+D+ A TG+GKTAAFM+PI+E
Sbjct: 240 TFNSLSLSRPVLKGLAHLGYTKPSPIQSATIPVALQGKDVIAGAVTGSGKTAAFMIPIIE 299
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQESVLR 210
RLL+KP TRV+VL PTREL +Q+ V +++ QF S + L+VGGL ++ QE L+
Sbjct: 300 RLLFKPSKVAMTRVIVLTPTRELAIQISDVAKKIGQFVSGLTFGLAVGGLNLRQQEQALK 359
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIVIATPGR +DH+ N+ SF++ +E+LVLDEADRML+E F ++KEI+ + RQ
Sbjct: 360 ARPDIVIATPGRFIDHIRNSASFNVDSVEILVLDEADRMLEEGFQDELKEIMTMLPSKRQ 419
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LYNVL 327
+LFSATM + LVS+SL RPVR+ +D + A L QEFV D ++ L+N++
Sbjct: 420 NLLFSATMNSKIKSLVSLSLRRPVRIMIDPPKQAASKLTQEFVRIRKRDNLKPALLFNLI 479
>gi|406868092|gb|EKD21129.1| ATP-dependent RNA helicase DRS1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 820
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 169/238 (71%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F + LSRP+L+ + A+ + PTPIQA TIP+AL G+D+ G A TG+GKTAAF++P+
Sbjct: 277 HATFQSLGLSRPILRGLSAVGFSAPTPIQAKTIPMALQGKDVVGGAVTGSGKTAAFIVPV 336
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+P+ +RV +L+PTREL +Q + V +LA T ++ L+VGGL +KVQE+ L
Sbjct: 337 LERLLYRPKKVPTSRVAILMPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQEAEL 396
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML+ FA ++ EI+ ++R
Sbjct: 397 RLRPDVIIATPGRFIDHMRNSVSFTVDTLEILVLDEADRMLEAGFADELNEILTTIPKSR 456
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
QTMLFSATM+ +V++L+ V L RPVR+ VD + L QEF+ E + L
Sbjct: 457 QTMLFSATMSSSVDNLIRVGLNRPVRLLVDAQKQTVGTLVQEFIRLRPGRETKRMGYL 514
>gi|310791457|gb|EFQ26984.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 772
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 117/225 (52%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+SSF M+LSRPLL+ + A+ + PTPIQA TIP+AL+G+D+ G A TG+GKT AF++PI
Sbjct: 246 SSSFQAMSLSRPLLRGLAAVGFSKPTPIQAKTIPIALMGKDVVGGAVTGSGKTGAFVVPI 305
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LERLLY+P+ +RV++L PTREL +Q + V +LA +T ++ L+VGGL +K QE L
Sbjct: 306 LERLLYRPKKVPTSRVVILTPTRELAIQCHAVATKLAAYTDIKFTLAVGGLSLKAQEVEL 365
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R PD++IATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA ++ EI+ ++R
Sbjct: 366 RLRPDVIIATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFADELNEILTTLPKSR 425
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDN-NHEVALNLRQEFV 313
QTMLFSATMT +V+ LV + + +P RV VD+ ++ L QEFV
Sbjct: 426 QTMLFSATMTSSVDKLVRLGMNKPARVMVDSQKNKTVGTLVQEFV 470
>gi|365984639|ref|XP_003669152.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
gi|343767920|emb|CCD23909.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/244 (48%), Positives = 177/244 (72%), Gaps = 4/244 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+ ++SF+ ++LSRP+LK + L Y P+PIQ+ATIP+ALLG+DI A TG+GKTAAFM+
Sbjct: 246 QTHTSFNTLSLSRPVLKGLANLGYNKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 305
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQE 206
PI+ERLL+KP +TRV+VL PTREL +Q+ V +++ +F + + L+VGGL ++ QE
Sbjct: 306 PIIERLLFKPAKVSSTRVIVLTPTRELAIQIADVAKKIGKFVNGLTFGLAVGGLNLRQQE 365
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+L++ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEADRML+E F ++ EI++L
Sbjct: 366 QILKQRPDIVIATPGRFIDHVRNSASFNVDSVEILVMDEADRMLEEGFQEELNEIMQLLP 425
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---L 323
RQTMLFSATM + L+++SL +PVR+ ++ + A L QEFV D ++ L
Sbjct: 426 TKRQTMLFSATMNSKIKQLINLSLKKPVRIMINPPKQAASKLTQEFVRIRTRDHLKPALL 485
Query: 324 YNVL 327
+N++
Sbjct: 486 FNLI 489
>gi|452845761|gb|EME47694.1| hypothetical protein DOTSEDRAFT_77927 [Dothistroma septosporum
NZE10]
Length = 1056
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 198/325 (60%), Gaps = 23/325 (7%)
Query: 9 NKEDKEDNE----GSEEDDVDAEEDFALPDDEMK--HDNIKNRQKLIGKKKQKRLAK--- 59
++ED ED + GSEED+ EE DD M+ HDN N + +A
Sbjct: 432 HEEDSEDVDEILDGSEEDE---EEYHTAIDDTMEDSHDNESNSEDAGRGGADDEIATALP 488
Query: 60 -------EGKLKQVEA-EEYEENEGGKEFFEDAPPVEEN---SSFHQMNLSRPLLKAIGA 108
E + EA ++ E E FF D + ++FH MNLSRP+LK + +
Sbjct: 489 TAHPNDDEEPVSASEAGDDAAEREKANAFFADGESKKTGPTATAFHSMNLSRPILKGLAS 548
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
+ + PTPIQ +PVAL G+D+ G A TG+GKTAAF++PILERLLY+P+ TRV +L
Sbjct: 549 VGFDKPTPIQMKAVPVALEGKDLVGGAVTGSGKTAAFLIPILERLLYRPKRTSMTRVAIL 608
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
+PTREL +Q + V ++L+ FT + VA++VGGL +K Q+ L+ PDIVIATPGR +D
Sbjct: 609 MPTRELALQCFNVAKKLSAFTDISVAMAVGGLSIKEQDKELKMRPDIVIATPGRFIDLER 668
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
N S + IE+LVLDEADRML+E FA ++ EI+ ++RQTMLFSATMT V+DLV
Sbjct: 669 NYRSLDVGTIEILVLDEADRMLEEGFADELNEILSKIPKSRQTMLFSATMTTKVDDLVRS 728
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFV 313
L RPVR+ VD + L QEFV
Sbjct: 729 GLQRPVRLMVDAQKQTVSGLTQEFV 753
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 160/222 (72%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF M+LSRP+L+ + ++ + PTPIQ+ +P+A+ G+D+ G A TG+GKTAAF++PILE
Sbjct: 289 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAMQGKDVVGGAETGSGKTAAFLIPILE 348
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+ + TRV + +PTREL VQ + V +LA FT + AL GG + QE+VL+
Sbjct: 349 RLLYRQKKIPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALMAGGFSSREQEAVLKT 408
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD+VIATPGR +DH+HNT +F + ++E+LVLDEADRML+E F SQ+ EI+ ++RQT
Sbjct: 409 RPDVVIATPGRFIDHMHNTAAFQVENLEILVLDEADRMLEEGFESQLNEILTTIPKSRQT 468
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATMT +V+ L+ + + +PVR+ VD + L QEFV
Sbjct: 469 MLFSATMTSSVDKLIRIGMDKPVRLMVDAKKQTVKGLTQEFV 510
>gi|226295334|gb|EEH50754.1| ATP-dependent RNA helicase drs1 [Paracoccidioides brasiliensis
Pb18]
Length = 755
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 180/277 (64%), Gaps = 7/277 (2%)
Query: 67 EAEEYEENEGGKEFF--EDAPPVEEN----SSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E E E K FF ED +N SF +LSRP+L+ + ++ + PTPIQ
Sbjct: 269 ESENPAEVEKQKAFFAPEDTTSTNDNLETAKSFQAFSLSRPILRGLTSVGFTTPTPIQRK 328
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ
Sbjct: 329 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCCN 388
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 389 VATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 448
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT+ ++ L+ V L RPVR+ VD
Sbjct: 449 LVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNTIDKLIRVGLNRPVRLMVDA 508
Query: 301 NHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLRENCL 337
+ L QEFV E + L + L + CL
Sbjct: 509 QKQTVGTLVQEFVRLRPGREDKRLGYL-IALCKTVCL 544
>gi|241957775|ref|XP_002421607.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
gi|223644951|emb|CAX40951.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
Length = 592
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/253 (49%), Positives = 180/253 (71%), Gaps = 8/253 (3%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
F+E + + ++SF + LSRP+LK I L + PTPIQ+A+IP+ALLG+DI A TG+
Sbjct: 104 FYEQSTH-QSHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGS 162
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVG 198
GKT A+M+PI+ERLLYKP +T+V++L PTREL +QVY+ ++L+ + + + L+VG
Sbjct: 163 GKTGAYMIPIIERLLYKP--STSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVG 220
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
GL ++ QE L+ PDIVIATPGRL+DH+ N+PSFS+ DI+VLV+DEADRML+E F ++
Sbjct: 221 GLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQEEL 280
Query: 259 KEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
EI+ L + RQT+LFSATM + DL+ +SL +PVR+ +D +VA L Q+FV
Sbjct: 281 TEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKQVASKLLQQFVRIRK 340
Query: 318 IDEVR---LYNVL 327
D ++ LY +L
Sbjct: 341 RDHLKPALLYQLL 353
>gi|320581153|gb|EFW95374.1| ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 747
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 170/246 (69%), Gaps = 4/246 (1%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E+ SF + LSRP+LKA+ AL Y P+ IQ+A+IP+ALLG+DI A TG+GKTAA+M+P
Sbjct: 238 EHQSFQSLKLSRPILKALSALGYSKPSAIQSASIPIALLGKDIVAGAVTGSGKTAAYMIP 297
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQES 207
I+ERLLYKP +TRV+VL PTREL +QV V +++ QF + + L+VGGL ++ QE
Sbjct: 298 IIERLLYKPSKMPSTRVIVLAPTRELAIQVADVGKKIGQFVNGLTFGLAVGGLNLRQQEQ 357
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L+K PDIVIATPGRL+DH+ N+ SF++ +EVLV DEADRML+E F ++ EI+ L
Sbjct: 358 ELKKRPDIVIATPGRLIDHIRNSVSFNVESVEVLVFDEADRMLEEGFQKELTEILSLLPL 417
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LY 324
RQTMLFSATM + L+ +SL +PVRV + A L QEFV + + L+
Sbjct: 418 NRQTMLFSATMNSRIKSLIQLSLKKPVRVMIGAPKAAASELVQEFVRIRKRESSKPALLF 477
Query: 325 NVLGLM 330
N+L M
Sbjct: 478 NILSEM 483
>gi|225677534|gb|EEH15818.1| ATP-dependent RNA helicase drs1 [Paracoccidioides brasiliensis
Pb03]
Length = 815
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/253 (49%), Positives = 172/253 (67%), Gaps = 6/253 (2%)
Query: 67 EAEEYEENEGGKEFF--EDAPPVEEN----SSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
E+E E E K FF ED +N SF +LSRP+L+ + ++ + PTPIQ
Sbjct: 270 ESENPAEVEKQKAFFAPEDTTSTNDNLETAKSFQAFSLSRPILRGLTSVGFTTPTPIQRK 329
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQ 180
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ
Sbjct: 330 TIPVALLGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCCN 389
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V +LA +T + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E+
Sbjct: 390 VATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEI 449
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT+ ++ L+ V L RPVR+ VD
Sbjct: 450 LVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTNTIDKLIRVGLNRPVRLMVDA 509
Query: 301 NHEVALNLRQEFV 313
+ L QEFV
Sbjct: 510 QKQTVGTLVQEFV 522
>gi|260941344|ref|XP_002614838.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
gi|238851261|gb|EEQ40725.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
Length = 748
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/254 (48%), Positives = 178/254 (70%), Gaps = 5/254 (1%)
Query: 79 EFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
EF+E A + + SF ++L+RP+LK + +L Y P+PIQ+A+IP+ALLG+DI A TG
Sbjct: 224 EFYEKAESDQAHKSFQSLDLARPVLKGLASLGYTKPSPIQSASIPIALLGKDIVAGAVTG 283
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT-SVEVALSV 197
+GKTAA+M+PI+ERLLYK +TRV++L PTREL +QV V +++ ++ ++ L+V
Sbjct: 284 SGKTAAYMIPIIERLLYKSSKVASTRVVILTPTRELAIQVCDVGKKIGRYVNNLTFGLAV 343
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GGL ++ QE L+ PDIV+ATPGRL+DH+ N+ SFSL +E+LV+DEADRML+E F +
Sbjct: 344 GGLNLRQQEQQLKTRPDIVVATPGRLIDHIRNSASFSLDALEILVMDEADRMLEEGFQVE 403
Query: 258 MKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
+ EI+ L + RQTMLFSATM + DL+ +SL +PVR+ +D A L QEFV
Sbjct: 404 LTEILTLIPKHKRQTMLFSATMNTKIQDLIQLSLNKPVRIMIDPPKAAANKLVQEFVRIR 463
Query: 317 NIDEVR---LYNVL 327
DE++ LY +L
Sbjct: 464 KKDEMKPALLYYLL 477
>gi|444318547|ref|XP_004179931.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
gi|387512972|emb|CCH60412.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
Length = 757
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/259 (47%), Positives = 178/259 (68%), Gaps = 10/259 (3%)
Query: 73 ENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
ENEG D + +++F+ ++LSRP+LK + AL Y P+PIQ+A IP+ALLG+DI
Sbjct: 224 ENEG------DEAKKQVHNTFNTLSLSRPVLKGLAALGYSKPSPIQSAAIPIALLGKDII 277
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-V 191
A TG+GKTAAFM+PI+ERLLYKP +TRV+VL PTREL +QV V +++ +F + V
Sbjct: 278 AGAVTGSGKTAAFMIPIIERLLYKPAKVTSTRVIVLTPTRELAIQVSDVGKKVGKFVNGV 337
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
L+VGGL ++ QE L+ PDIV+ATPGR +DH+ N+ SF++ +E+LV+DEADRML+
Sbjct: 338 TFGLAVGGLNLRQQEQQLKSRPDIVVATPGRFIDHIRNSASFNVDSVEILVIDEADRMLE 397
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
+ F ++ EI+ L RQT+LFSATM + L+S+SL +PVR+ +D + A L QE
Sbjct: 398 DGFQDELNEIMSLLPSKRQTLLFSATMNSKIKQLISLSLKKPVRIMIDPPKQAAAKLVQE 457
Query: 312 FVSFSNIDEVR---LYNVL 327
FV D ++ LY ++
Sbjct: 458 FVRIRKRDNLKPALLYTLI 476
>gi|47211205|emb|CAF90162.1| unnamed protein product [Tetraodon nigroviridis]
Length = 517
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 143/168 (85%)
Query: 146 MLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
MLP+LERL+YKPR Q TRVLVLVPTRELG+QV+ V+RQLAQFTS+ L+VGGL++K Q
Sbjct: 1 MLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVSRQLAQFTSITTCLAVGGLDLKSQ 60
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
E LR PD++IATPGRL+DHLHNTPSF LS IE+L+LDEADRMLDE+F QMKEIIRLC
Sbjct: 61 EVALRAGPDVLIATPGRLIDHLHNTPSFELSHIEILILDEADRMLDEYFEEQMKEIIRLC 120
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
S RQTMLFSATM++ V DL +VSL +PVR+FV++N +VA LRQEFV
Sbjct: 121 SYNRQTMLFSATMSEEVKDLAAVSLKQPVRIFVNSNTDVAPYLRQEFV 168
>gi|453086868|gb|EMF14909.1| DEAD-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 725
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/252 (49%), Positives = 172/252 (68%), Gaps = 10/252 (3%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSS------FHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
AE+ E E +FF + +E SS FH MNLSRP+L+ + A+ + PTPIQA +
Sbjct: 209 AEDVLEKEKRNKFFAN----DEKSSNPAATAFHAMNLSRPILRGLAAVGFDKPTPIQAKS 264
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IPVAL GRD+ G A TG+GKT AF++PILERL+++P+ TRV++L+PTREL +Q + V
Sbjct: 265 IPVALEGRDLVGGAETGSGKTGAFIIPILERLMFRPKRTATTRVVILMPTRELALQCFNV 324
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
++LA T + ++GGL ++ QE L+ PDIVIATPGR +D N+ F +S +E+L
Sbjct: 325 AKKLAAHTDITFGQAIGGLNLREQEKALKLRPDIVIATPGRFIDLERNSTGFDVSTVEIL 384
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
VLDEADRML+E FA ++ EI+ ++RQTMLFSATMT V+DL+ L RPVR+ VD+
Sbjct: 385 VLDEADRMLEEGFADELNEILTKIPKSRQTMLFSATMTTKVDDLIRSGLQRPVRLMVDSQ 444
Query: 302 HEVALNLRQEFV 313
+ L QEFV
Sbjct: 445 QQTVKGLVQEFV 456
>gi|298706016|emb|CBJ29130.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 944
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 171/246 (69%), Gaps = 11/246 (4%)
Query: 79 EFFED-----APPVEENSS-----FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLG 128
E+FED A P +++S F Q+N+SRPLL+A+ A+ Y+ PT +Q +P AL G
Sbjct: 285 EYFEDGDDADASPGGDDASSGGVPFQQLNISRPLLRAVEAMGYVTPTSVQQRAVPFALAG 344
Query: 129 RDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF 188
RD+C A TG+GKTAAF+LPILERLLY+P+ TRV+++ PTRELGVQ++ + R L+QF
Sbjct: 345 RDVCASATTGSGKTAAFLLPILERLLYRPKKVAVTRVMIITPTRELGVQIHSMCRSLSQF 404
Query: 189 TSVEVALSVGGLE-VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
T + AL VGG + +K QE+ LR PDIVI TPGR++DHL N+ S + D+E+LVLDEAD
Sbjct: 405 TDIACALVVGGNKNLKAQEAELRARPDIVICTPGRMVDHLTNSASVHMDDVEILVLDEAD 464
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
R+L+ F ++ E+++ C RQT+LFSATM V+DL S++L +PVRV +
Sbjct: 465 RLLELGFQEEVAELVKSCPIGRQTLLFSATMNTKVDDLASLALNKPVRVKASPMNSAPQR 524
Query: 308 LRQEFV 313
L QEFV
Sbjct: 525 LVQEFV 530
>gi|448091961|ref|XP_004197457.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|448096550|ref|XP_004198488.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359378879|emb|CCE85138.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
gi|359379910|emb|CCE84107.1| Piso0_004710 [Millerozyma farinosa CBS 7064]
Length = 719
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 168/237 (70%), Gaps = 2/237 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+ + +F + LSRP+L+A+G L Y+ P+ IQ++ IP+ALLG+DI A TG+GKTAA+M+
Sbjct: 203 QSHETFQSLQLSRPILRALGQLGYVKPSAIQSSAIPIALLGKDIVAGAVTGSGKTAAYMI 262
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF-TSVEVALSVGGLEVKVQE 206
PI+ERLLYKP RV+VL PTREL +QV+ V +++ +F ++ L+VGGL ++ QE
Sbjct: 263 PIIERLLYKPSKISAIRVIVLTPTRELAIQVHDVGKKIGRFVNNLNFGLAVGGLNLRQQE 322
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L+ PDIVIATPGRL+DH+ N+PSFS+ +E++V+DEADRMLDE F +++ EI+ L
Sbjct: 323 QQLKSRPDIVIATPGRLIDHIRNSPSFSIDTLEIMVIDEADRMLDEGFQAELTEILSLVP 382
Query: 267 R-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
+ RQT+LFSATM + DL+ +SL RPVR+ +D L QEFV D ++
Sbjct: 383 KQKRQTLLFSATMNTKIQDLIQLSLDRPVRIMIDPPKATTAKLVQEFVRIRKRDHLK 439
>gi|149042852|gb|EDL96426.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Rattus norvegicus]
Length = 340
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/249 (54%), Positives = 168/249 (67%), Gaps = 11/249 (4%)
Query: 3 SSDEEGNKEDKEDNEGSEEDDVDAEEDF----ALPDDEMKHDNIKNRQKLIGKKKQKRLA 58
+ D+E E+ EG E D+ +E+ A DE + + + I L
Sbjct: 99 AEDKEAKSGKAEEKEGQEGSDLKGQENLGENEAGSKDEESETDYSSEDEEI-------LT 151
Query: 59 KEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQ 118
K LK E ++ ++ + FFEDA +++ +F MNLSRPLLKAI A+ + PTPIQ
Sbjct: 152 KADTLKVKEKKKKKKGQESGGFFEDASEYDKSLTFQDMNLSRPLLKAITAMGFKQPTPIQ 211
Query: 119 AATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQV 178
A IPV LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV
Sbjct: 212 KACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQV 271
Query: 179 YQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDI 238
+ VT+QLAQF S+ L+VGGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS I
Sbjct: 272 HSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSI 331
Query: 239 EVLVLDEAD 247
EVL+LDEAD
Sbjct: 332 EVLILDEAD 340
>gi|325179957|emb|CCA14359.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 843
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 195/321 (60%), Gaps = 20/321 (6%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEG 61
D DE+ +K D + S+EDD + + L ++E K ++L K K +
Sbjct: 129 DKDDEKLDKADVTSHSTSDEDDEEISDKPDLVEEEAKLQEALQSKQLHAKNKSE------ 182
Query: 62 KLKQVEAEEYEENEGGKEFFEDAPPVEENS---------SFHQMNLSRPLLKAIGALNYI 112
++ EE FFE+ P V + +F LSRP+L+A+ +
Sbjct: 183 -----PEQDEEERVKALAFFENNPFVSSGNMKVSAIKVDTFADFKLSRPILRALNQMELT 237
Query: 113 YPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTR 172
PT IQ IP+ALLG+DIC A TG+GKTAAF+LPILERL + R TRV+++ P R
Sbjct: 238 KPTLIQEYAIPMALLGKDICASAQTGSGKTAAFLLPILERLQLRTRRIAATRVIIICPVR 297
Query: 173 ELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPS 232
EL Q V +LA+FT + AL VGGL +K QE LR CPDI++ TPGR++DHL N+PS
Sbjct: 298 ELATQCQSVLIKLARFTDITSALVVGGLPLKAQELELRTCPDIIVCTPGRMIDHLRNSPS 357
Query: 233 FSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTR 292
L +E+LVLDEADR+L+ F +++EI+R+C R RQTMLFSATMT ++ L+++S+ R
Sbjct: 358 VHLDSLEILVLDEADRLLELGFTEEIQEIVRMCPRARQTMLFSATMTSKIDQLIALSMKR 417
Query: 293 PVRVFVDNNHEVALNLRQEFV 313
PVR+ D ++++ +L QEFV
Sbjct: 418 PVRICADPLYDMSKHLVQEFV 438
>gi|291001041|ref|XP_002683087.1| DEAD-box ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096716|gb|EFC50343.1| DEAD-box ATP-dependent RNA helicase [Naegleria gruberi]
Length = 887
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/322 (45%), Positives = 198/322 (61%), Gaps = 18/322 (5%)
Query: 12 DKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEY 71
D+ED E SE +D EE+ +HD IK +GK KE + +E
Sbjct: 205 DEEDGEISENND--EEEELG------RHDIIKT----LGKASNSIDKKENNI----IDEK 248
Query: 72 EENEGGKEFFEDAPP-VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
+E+ FF +AP +E + SF+ MNLSRPLLKAI Y +PTPIQ+ IP+ L GRD
Sbjct: 249 DEDNYDTSFFSEAPADIEVSKSFNDMNLSRPLLKAIYEKGYEHPTPIQSRCIPLLLKGRD 308
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
IC A TG+GKTAAF+LP LERLLY+ R + T V+ L+PTREL Q Y+ Q+T
Sbjct: 309 ICASAMTGSGKTAAFILPTLERLLYRDRSRKETLVVALLPTRELAAQCYEDCSHFLQYTD 368
Query: 191 VEVALSVGG-LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
+ L GG L+++ Q VL+ P+I+IATPGR++DHL N+P+F L ++EVL+LDEADR+
Sbjct: 369 IRCCLITGGNLKIQKQIQVLQSKPEIIIATPGRVVDHLLNSPNFRLDEVEVLILDEADRL 428
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L+ F Q+K I+ RQTMLFSATMTD + LV +SL P+RV D+ VA L
Sbjct: 429 LELGFEPQIKTILDHIPTARQTMLFSATMTDDIEQLVKLSLKNPIRVSCDSRTGVASGLT 488
Query: 310 QEFVSFSNIDEVRLYNVLGLML 331
QEF+ ++ + + + + L L
Sbjct: 489 QEFIKLADDENIIMKQAILLSL 510
>gi|300121162|emb|CBK21543.2| unnamed protein product [Blastocystis hominis]
Length = 627
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 162/219 (73%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF+Q+ LSRPLL+A+ + + PTPIQA IP+AL G+DIC A TG+GKTAA++LPILE
Sbjct: 171 SFNQLRLSRPLLRAVNEMGFTTPTPIQARCIPLALAGKDICAAAKTGSGKTAAYLLPILE 230
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLYK RVL++ PTREL QV+ + +L ++TS+ L VGGL ++ Q L++
Sbjct: 231 RLLYKNNAQNLIRVLIVAPTRELAQQVHTIATKLTKYTSITCCLVVGGLPLQAQAVDLQR 290
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDIV+ TPGR++DH+HN+ S L D+EV++LDEADR+L+ F ++ E++RLC RQT
Sbjct: 291 RPDIVVCTPGRMIDHVHNSMSVDLDDVEVVILDEADRLLELGFTEELHELLRLCPVKRQT 350
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+LFSATMTD V+DL+S+SL +PVRVFVD ++V L Q
Sbjct: 351 LLFSATMTDDVSDLISLSLQKPVRVFVDPVNQVVDRLVQ 389
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 154/210 (73%), Gaps = 1/210 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++LSRPL +A AL Y PTPIQAA IP+A+ GRD+CG A TG+GKTAAFMLP LE
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLE 208
Query: 152 RLLYK-PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
R+L++ PR T VLVLVPTREL VQV+Q+T LAQFT++ L VGGL VQ + LR
Sbjct: 209 RMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALR 268
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
P+IV+ATPGR++DH+ NT SF L D+ L+LDEADR+L+ F ++KEI+R C + RQ
Sbjct: 269 TRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEIVRQCPKKRQ 328
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
T+LFSAT+T V L S+S+ P R+ D
Sbjct: 329 TLLFSATLTAGVEALASLSMKNPARLSADT 358
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 154/210 (73%), Gaps = 1/210 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++LSRPL +A AL Y PTPIQAA IP+A+ GRD+CG A TG+GKTAAFMLP LE
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLE 208
Query: 152 RLLYK-PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
R+L++ PR T VLVLVPTREL VQV+Q+T LAQFT++ L VGGL VQ + LR
Sbjct: 209 RMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAALR 268
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
P+IV+ATPGR++DH+ NT SF L D+ L+LDEADR+L+ F ++KEI+R C + RQ
Sbjct: 269 TRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEIVRQCPKKRQ 328
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
T+LFSAT+T V L S+S+ P R+ D
Sbjct: 329 TLLFSATLTAGVEALASLSMKNPARLSADT 358
>gi|406605499|emb|CCH43143.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 740
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 179/268 (66%), Gaps = 24/268 (8%)
Query: 82 EDAPPVEENSSFH------------------QMNLSRPLLKAIGALNYIYPTPIQAATIP 123
ED+P E+ + F+ ++LSRP+LK + L Y P+PIQ+ATIP
Sbjct: 206 EDSP--EDMAKFYAPTEEADQAKKQIHKTFQSLDLSRPILKGLSTLGYQTPSPIQSATIP 263
Query: 124 VALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTR 183
+ALLG+DI A TG+GKTAA+M+P++ERLLYKP +TRV+VL PTREL +QV V +
Sbjct: 264 IALLGKDIIAGAVTGSGKTAAYMIPVIERLLYKPAKLASTRVIVLTPTRELAIQVNDVGK 323
Query: 184 QLAQFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
++ +F + + L+VGGL ++ QE L++ PDIVIATPGR++DHL N+PSF++ +E+L+
Sbjct: 324 KIGKFVNGLSFGLAVGGLNLRQQEQELKQRPDIVIATPGRIIDHLRNSPSFNVDGVEILI 383
Query: 243 LDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
+DEADRML+E F ++ EI+ + RQT+LFSATM + L+ +SL +PVR+ +D
Sbjct: 384 VDEADRMLEEGFQKELTEILDILPTKRQTLLFSATMNSKIKSLIQLSLKKPVRIMIDPPK 443
Query: 303 EVALNLRQEFVSFSNIDEVR---LYNVL 327
+ A L QEFV D ++ L+N+L
Sbjct: 444 QAATGLVQEFVRIRKRDHLKPSILFNIL 471
>gi|301110278|ref|XP_002904219.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262096345|gb|EEY54397.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 758
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 178/265 (67%), Gaps = 7/265 (2%)
Query: 55 KRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEEN------SSFHQMNLSRPLLKAIGA 108
KR K+ + ++ +E E+ + EFFE P + +F + LSRP+++AI
Sbjct: 90 KRTKKDQQSREELVDELEKKKAA-EFFEADPFAAQEFAKTKFETFADLKLSRPIMRAISH 148
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
+ + PTPIQ IP+AL G+DIC A TG+GKTAAF+LPILERL ++ R Q+TRV+++
Sbjct: 149 IGFEKPTPIQQRAIPIALTGKDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRVMII 208
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
P REL Q + QLA+FT + +L+VGGL +K QE+ LR PD+V+ TPGR++DHL
Sbjct: 209 CPVRELATQCQSMLEQLARFTDITCSLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLR 268
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
N+ S + D+E+LVLDEADR+L+ F ++ E++R+C RQTMLFSATMT V+ L+ +
Sbjct: 269 NSKSVHMDDLEILVLDEADRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDL 328
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFV 313
S+ RPVR+ D ++A +L QEFV
Sbjct: 329 SMKRPVRISTDPLFDMAKHLVQEFV 353
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/228 (54%), Positives = 161/228 (70%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F +++LSRPLLKA+ L + PTPIQA TIP+AL G+DI A+TG+GKTAAF+L
Sbjct: 179 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKTIPLALNGKDILASASTGSGKTAAFLL 238
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PILERLL++ + + RVLVL+PTREL +Q V LAQF+++ L VGGL K QE
Sbjct: 239 PILERLLFRDSEYRAIRVLVLLPTRELALQCQSVLENLAQFSNITSCLIVGGLSNKAQEV 298
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LRK PD+VIATPGRL+DHL N L D+E+L+LDEADR+LD F ++ +I+ C
Sbjct: 299 ELRKRPDVVIATPGRLIDHLLNAHGIGLEDLEILILDEADRLLDMGFKDEINKIVDSCPT 358
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
+RQTMLFSAT+ D V L +SL +P+RV VD +VA L QEFV
Sbjct: 359 SRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALFQVASTLDQEFVKI 406
>gi|348667582|gb|EGZ07407.1| hypothetical protein PHYSODRAFT_527947 [Phytophthora sojae]
Length = 773
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 167/247 (67%), Gaps = 6/247 (2%)
Query: 73 ENEGGKEFFEDAPPVEEN------SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
E + EFFE P E +F + LSRP+++AI + + PTPIQ IP+AL
Sbjct: 125 EKKKAAEFFESDPFAAEEFAKTRFETFADLKLSRPIMRAISHIGFEKPTPIQQRAIPIAL 184
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
G+DIC A TG+GKTAAF+LPILERL ++ R Q+TR +++ P REL Q + QLA
Sbjct: 185 TGKDICASAQTGSGKTAAFLLPILERLQFRSRRVQSTRTMIICPVRELATQCQSMFEQLA 244
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
+FT + +L+VGGL +K QE+ LR PD+V+ TPGR++DHL N+ S + D+E+LVLDEA
Sbjct: 245 RFTDITCSLAVGGLPLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEA 304
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DR+L+ F ++ E++R+C RQTMLFSATMT V+ L+ +S+ RPVR+ D ++A
Sbjct: 305 DRLLELGFTEEVLELVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAK 364
Query: 307 NLRQEFV 313
+L QEFV
Sbjct: 365 HLVQEFV 371
>gi|156844737|ref|XP_001645430.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
gi|160380651|sp|A7TJM9.1|DRS1_VANPO RecName: Full=ATP-dependent RNA helicase DRS1
gi|156116092|gb|EDO17572.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 752
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 165/234 (70%), Gaps = 1/234 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+S+F+ + LSRP+LK + L Y P+PIQ+ATIP+ L G+DI A TG+GKTAAFM+PI
Sbjct: 230 HSTFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGLSGKDIIAGAVTGSGKTAAFMIPI 289
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQESV 208
+ERLLYKP +TRV+VL PTREL +Q+ V +++ ++ S + L+VGGL ++ QE
Sbjct: 290 IERLLYKPAKVASTRVIVLTPTRELAIQIADVGKKIGKYVSGLTFGLAVGGLNLRQQEQE 349
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L+ PDIVIATPGR +DH+ N+ SF++ +EVLV+DEADRML+E F ++ EI+ L
Sbjct: 350 LKTRPDIVIATPGRFIDHVRNSSSFNVDSVEVLVMDEADRMLEEGFQEELNEILTLLPSK 409
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
RQT+LFSATM + L+S+SL +PVR+ ++ + A L QEFV D ++
Sbjct: 410 RQTLLFSATMNSRIKSLISLSLRKPVRIMINPPKQAAARLTQEFVRIRKRDHLK 463
>gi|366986679|ref|XP_003673106.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
gi|342298969|emb|CCC66713.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
Length = 748
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 169/241 (70%), Gaps = 4/241 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F+ ++LSRP+LK + L Y P+PIQ+ATIPVAL G+DI A TG+GKTAAFM+P++
Sbjct: 226 ANFNSLSLSRPVLKGLATLGYTKPSPIQSATIPVALSGKDIIAGAVTGSGKTAAFMIPVI 285
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF-TSVEVALSVGGLEVKVQESVL 209
ERLL+K TRV+VL PTREL +Q+ V +++ +F + L+VGGL ++ QE L
Sbjct: 286 ERLLFKSAKIAATRVIVLTPTRELAIQISDVGKKIGKFINGITFGLAVGGLNLRQQEQEL 345
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+ PDIVIATPGR +DH+ N+ SF++ +E+LV+DEADRML+E F ++ EI++L R
Sbjct: 346 KARPDIVIATPGRFIDHIRNSASFNVDSVEILVIDEADRMLEEGFQEELNEIMQLLPNKR 405
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR---LYNV 326
QT+LFSATM + LVS+SL +PVR+ +D + A L QEFV D ++ L+N+
Sbjct: 406 QTLLFSATMNSKIKQLVSLSLRKPVRIMIDPPKQAASRLTQEFVRIRARDHLKPALLFNL 465
Query: 327 L 327
+
Sbjct: 466 I 466
>gi|303283946|ref|XP_003061264.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457615|gb|EEH54914.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 809
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 152/210 (72%), Gaps = 1/210 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF+ +NLSR L++A AL Y PTPIQAA +P+AL GRDICG A TG+GKTAAFMLP+LE
Sbjct: 179 SFNDLNLSRQLIRACTALGYDVPTPIQAAVVPLALTGRDICGRAVTGSGKTAAFMLPLLE 238
Query: 152 RLLYK-PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
R+L++ R T VLVLVPTREL VQV+Q+T +LAQFTS+ AL VGGL Q + LR
Sbjct: 239 RMLHRGARAAAATHVLVLVPTRELAVQVHQMTMRLAQFTSIRAALVVGGLSANTQAAELR 298
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
P+IV+ATPGRL+DH+ NT S L D+ LVLDEADR+L+ F +++EI+R C RQ
Sbjct: 299 TRPEIVVATPGRLIDHVRNTHSVGLEDLAALVLDEADRLLEMGFLEEIREIVRHCPTRRQ 358
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
TMLFSAT+T V +L S+ P R+ D
Sbjct: 359 TMLFSATLTSGVQELAEFSMKHPARLSADQ 388
>gi|322703237|gb|EFY94849.1| ATP-dependent RNA helicase drs-1 [Metarhizium anisopliae ARSEF 23]
Length = 944
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 192/297 (64%), Gaps = 7/297 (2%)
Query: 22 DDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFF 81
DD DA + + +D+ D + + + + + E+ EE EFF
Sbjct: 184 DDTDASDKSDVDEDDHDDDRASDDDSVATPEAHPE--DDASDATDDEEDAEEQAKRDEFF 241
Query: 82 -----EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
+ + + + SSF M+LSRP+L+ + A+ + PTPIQA TIP+AL+G+D+ G A
Sbjct: 242 APEERQKSDKIVDLSSFQGMSLSRPILRGLAAVGFTKPTPIQAKTIPIALMGKDVVGGAV 301
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
TG+GKT AF +PILERLL++P+ TRV+VL PTREL +Q + V +LA++T ++ +L+
Sbjct: 302 TGSGKTGAFFVPILERLLFRPKKIPTTRVVVLTPTRELAMQCHDVGTKLARYTDIKFSLA 361
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
VGGL +K QE LR PDI++ATPGR +DH+ N+ SF++ +E+LVLDEADRML++ FA
Sbjct: 362 VGGLSLKAQEVELRLRPDIIVATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFAD 421
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ EI+ ++RQTMLFSATMT V+ L+ V L +PVR+ VD+ + L QEFV
Sbjct: 422 ELNEILTTLPKSRQTMLFSATMTSTVDRLIRVGLNKPVRLMVDSQKKTVTTLVQEFV 478
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 166/231 (71%), Gaps = 1/231 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F+ ++LSRP+LK + L Y P+PIQ+ATIP+ LLG+DI A TG+GKTAAFM+PI
Sbjct: 219 HTNFNTLSLSRPVLKGLSDLGYTKPSPIQSATIPIGLLGKDIIAGAVTGSGKTAAFMIPI 278
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQESV 208
+ERLLYKP + +TRV+VL PTREL +QV V +++ ++ + + L+VGGL ++ QE
Sbjct: 279 IERLLYKPANIASTRVIVLTPTRELAIQVSDVGKRIGKYVNGLTFGLAVGGLNLRQQEQE 338
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L+ PD+VIATPGR +DH+ N+ SF++ +EVLV+DEADRML++ F ++ EI+ L
Sbjct: 339 LKTRPDVVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQEELNEIMSLLPTK 398
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
RQT+LFSATM + L+S+SL RPVR+ ++ + A L QEFV D
Sbjct: 399 RQTLLFSATMNSKIKQLISLSLRRPVRIMINPPKQAAARLTQEFVRIRKRD 449
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 158/224 (70%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++LSRPL KA+ L Y PTPIQA IP+ L G+DI A TG+GKTAAF+LPILE
Sbjct: 235 TFEELHLSRPLQKAVAKLGYTQPTPIQAKAIPLILNGKDILASATTGSGKTAAFILPILE 294
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLLY+ + +RVL+++PTREL +Q + V LAQFT+V+ L VGGL KVQE LRK
Sbjct: 295 RLLYRDATHRVSRVLIVLPTRELALQCHSVFESLAQFTNVQSCLVVGGLSNKVQEHELRK 354
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD++IATPGRL+DHL N L DIE+LVLDEADR+LD F ++ ++ C RQT
Sbjct: 355 RPDVIIATPGRLIDHLLNAHDVGLEDIEILVLDEADRLLDMGFKDELNRVVESCPDGRQT 414
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
+LFSAT++D V L +SL++PVRV VD +VA L QEF+
Sbjct: 415 LLFSATLSDDVKLLAKLSLSQPVRVAVDALFQVASTLEQEFIKI 458
>gi|449296384|gb|EMC92404.1| hypothetical protein BAUCODRAFT_27693 [Baudoinia compniacensis UAMH
10762]
Length = 699
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 163/243 (67%), Gaps = 2/243 (0%)
Query: 73 ENEGGKEFF--EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
E E FF E E +SF M+LSRP++K + ++ + TPIQ IPVAL G+D
Sbjct: 173 EREKEAAFFAPETTSKPENETSFGAMSLSRPIMKGLASVGFSAATPIQRKAIPVALEGKD 232
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
I G A TG+GKTAAFM+PILERLLY+P+ TRV +L+PTREL +Q V ++LA FT
Sbjct: 233 IVGGAVTGSGKTAAFMIPILERLLYRPKRVATTRVAILMPTRELALQCLAVAKKLAAFTD 292
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
+ ++GGL ++ QE L+ PDIVIATPGR +D + N +F IE+LVLDEADRML
Sbjct: 293 ITFGRAIGGLNLREQEKELKLRPDIVIATPGRFIDFMRNYNAFQTDKIEILVLDEADRML 352
Query: 251 DEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+E F+ ++ EI++ ++RQTMLFSATMT V+DL+ V + RPVR+ VD A L Q
Sbjct: 353 EEGFSDELNEILKTIPKSRQTMLFSATMTSRVDDLIRVGMQRPVRIMVDAQKASASGLVQ 412
Query: 311 EFV 313
EF+
Sbjct: 413 EFI 415
>gi|256079059|ref|XP_002575808.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230863|emb|CCD77280.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 625
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 166/226 (73%), Gaps = 3/226 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF +++L++PLLK++ ++ PTPIQ A IPVALL RDIC CA TG+GKT AF+LP+L
Sbjct: 125 SSFIELSLAKPLLKSLTEMSLDKPTPIQCACIPVALLHRDICACARTGSGKTLAFLLPVL 184
Query: 151 ERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFT-SVEVALSVGGLEVKVQES 207
ERL K D + TR LV+ PTREL VQ++ V +L ++ + + L+ GGL++ QE+
Sbjct: 185 ERLAKKSTDFNHAVTRALVISPTRELAVQIFNVAEKLVKYCPKLRIQLAAGGLDLHSQEA 244
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LR PD+V+ATPGRL+DHL N PSF+L IE LVLDEAD++LDE+FA Q+ EII+ CS
Sbjct: 245 SLRLNPDLVVATPGRLIDHLSNAPSFNLQHIEYLVLDEADKLLDEYFAEQIGEIIKFCST 304
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQT+LFSATMT++V +L +SL PV+VF++ VA L QEFV
Sbjct: 305 KRQTLLFSATMTESVKELAILSLRDPVQVFLNQATAVAQCLHQEFV 350
>gi|149245944|ref|XP_001527442.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013518|sp|A5DY34.1|DRS1_LODEL RecName: Full=ATP-dependent RNA helicase DRS1
gi|146449836|gb|EDK44092.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 686
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/255 (47%), Positives = 178/255 (69%), Gaps = 9/255 (3%)
Query: 71 YEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
YE E + ++ +F ++ LSRP+LK++ L + PTP+QA+TIP+ALLG+D
Sbjct: 181 YESQETN-----TSASALKSKTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKD 235
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
I A TG+GKTAA+++PI+ERLLY ++ +T+ ++L PTREL +QV+ V R+L QF S
Sbjct: 236 IVASAQTGSGKTAAYLIPIIERLLY-VKNSTSTKAIILTPTRELAIQVHDVGRKLGQFVS 294
Query: 191 -VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
+ ++VGGL +K QE L+ PDIVIATPGRL+DH+ N+PSFS+ D++VL++DEADRM
Sbjct: 295 NLNFGMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVEDVQVLIIDEADRM 354
Query: 250 LDEHFASQMKEIIRLCSR-TRQTMLFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALN 307
L+E F ++ EI+ L + RQT+LFSATM + + DLV +SL +P++V +D VA
Sbjct: 355 LEEGFQEELTEILSLIPKQKRQTLLFSATMNNTKIQDLVQLSLNKPIKVSIDPPRTVASK 414
Query: 308 LRQEFVSFSNIDEVR 322
L Q+FV +E++
Sbjct: 415 LEQQFVRIRKREELK 429
>gi|50547049|ref|XP_500994.1| YALI0B16896p [Yarrowia lipolytica]
gi|74660102|sp|Q6CEB8.1|DRS1_YARLI RecName: Full=ATP-dependent RNA helicase DRS1
gi|49646860|emb|CAG83247.1| YALI0B16896p [Yarrowia lipolytica CLIB122]
Length = 753
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/246 (50%), Positives = 175/246 (71%), Gaps = 9/246 (3%)
Query: 86 PVEENS--------SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
P EEN+ +F +NLSRP++K I AL Y PTPIQ+ TIP+AL+G+D+ A T
Sbjct: 239 PEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVT 298
Query: 138 GTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALS 196
G+GKTAA+++P+LERLLYK T+V+VL PTREL +QV V ++LAQ+ S V L+
Sbjct: 299 GSGKTAAYIIPVLERLLYKSSKVAATKVVVLTPTRELSIQVADVGKKLAQYVSGVRFGLA 358
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
VGGL ++VQE L+ P++VIATPGR +DH+ N+PSF++ D+E+LV+DEADRML+E F
Sbjct: 359 VGGLNLRVQEQELKTRPEVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQQ 418
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
++ EI+ L + RQT+LFSATM +++ L+ +SL+RPVRV ++ + A L QEFV
Sbjct: 419 ELTEILTLLPKKRQTLLFSATMNSSISSLIQLSLSRPVRVMINPPKQAASGLVQEFVRIR 478
Query: 317 NIDEVR 322
D ++
Sbjct: 479 KRDHLK 484
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 158/228 (69%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F +++LSRPLLKA+ L + PTPIQA IP+AL G+DI A+TG+GKTAAF+L
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+LERLL++ + + RVL+L+PTREL +Q V LAQF+++ L VGGL K QE
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEV 306
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LRK PD+VIATPGRL+DHL N L D+E+L+LDEADR+LD F ++ +I+ C
Sbjct: 307 ELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPT 366
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
RQTMLFSAT+ D V L +SL +P+RV VD +V L QEFV
Sbjct: 367 NRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKI 414
>gi|320588174|gb|EFX00649.1| ATP-dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 1617
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 159/237 (67%), Gaps = 1/237 (0%)
Query: 92 SFHQMNL-SRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SF M L SRP+L+ I A + PT IQA TIP + G D+ G A TG+GKTAAF+LPIL
Sbjct: 264 SFQAMRLFSRPILRGIAAAGFDTPTQIQAKTIPFGIGGHDVVGQAVTGSGKTAAFLLPIL 323
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERLL++P + TRV++L PTREL VQ ++V +LA FT + +AL+VGG K E+ LR
Sbjct: 324 ERLLHRPTNVPKTRVVILTPTRELAVQCHKVAVKLAAFTPITMALTVGGTSFKSSEASLR 383
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIVI TPGR +DH+ N+PSF++ +E+LVLDEADRML + FA ++ EI++ R RQ
Sbjct: 384 SRPDIVIGTPGRFIDHMRNSPSFAVDGVEILVLDEADRMLQDGFADELNEIVQTLPRGRQ 443
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
T+LFSATM +V+ L+ V L+RPVR+ D+ A L Q FV E R L
Sbjct: 444 TLLFSATMGASVDQLIRVGLSRPVRIQADDKSRTAGTLTQAFVRLRQGREDRRLGYL 500
>gi|331219074|ref|XP_003322214.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301204|gb|EFP77795.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 785
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 210/340 (61%), Gaps = 8/340 (2%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEG 61
D SDE+ + DK ++E +EDD D+EED + ++ D+ + + +G K Q +
Sbjct: 161 DCSDEDVDHSDKNNDETRQEDDFDSEEDGSHSANDQALDDKTYQDRELGSKNQDASSNAY 220
Query: 62 KLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
+ V + E E +D+ +S +LSRP+L + +++ PTPIQ
Sbjct: 221 FDQSVVPFDPATKE---ELVKDSHDQPFSSLPGAASLSRPVLLGLSSMSITSPTPIQRQA 277
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYK-PRDDQNTRVLVLVPTRELGVQVYQ 180
IP+ LLG+D+ + TG+GKT +M+PI+ERL+++ + TRV++L PTREL VQV+Q
Sbjct: 278 IPLGLLGKDLVCSSVTGSGKTLGYMVPIVERLIWRDKKGGGRTRVMILTPTRELAVQVFQ 337
Query: 181 VTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEV 240
V + LA+FT + +L VGG++++ QE+ LR+ P+IVI TPGR++DH+ NT FSL +E+
Sbjct: 338 VGKLLARFTDLTFSLCVGGMDLRTQEAELRERPEIVIGTPGRVIDHIRNTRGFSLETLEI 397
Query: 241 LVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDN 300
LV+DEADR+L+E F +++EII C R+RQTMLFSAT+ ++V DL +SL +P+R+ +D
Sbjct: 398 LVIDEADRILEEGFQDELEEIISNCPRSRQTMLFSATVNESVADLAKLSLDKPIRIKIDP 457
Query: 301 NHEVALNLRQEFV----SFSNIDEVRLYNVLGLMLLRENC 336
A L QEF+ S SN L +V +L C
Sbjct: 458 PKSTAAGLTQEFLKVKDSASNKKAASLTDVTRQAILVTLC 497
>gi|281208721|gb|EFA82896.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 803
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/228 (53%), Positives = 158/228 (69%), Gaps = 6/228 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F +++LSRPL KA+ L + PTPIQA TIP + CA TG+GKTAAF+L
Sbjct: 178 EELPTFQELHLSRPLQKAVQKLGFTMPTPIQAKTIPPS------TQCATTGSGKTAAFLL 231
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PILERLLY+ D++ RVLVL+PTREL +Q V LAQFT++ L VGGL KVQE
Sbjct: 232 PILERLLYRDVDNRAIRVLVLLPTRELALQCQSVLENLAQFTNITSCLVVGGLSNKVQEV 291
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LRK PD+VIATPGRL+DHL N L D+E+LVLDEADR+LD F ++++I+ C
Sbjct: 292 ELRKRPDVVIATPGRLIDHLLNAHDVGLDDLEILVLDEADRLLDMGFKDELEKIVESCPA 351
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
RQ++LFSAT++D V L +SL +P+RV VD ++VA L QEFV
Sbjct: 352 NRQSLLFSATLSDEVKTLAKLSLKQPIRVAVDALYQVASTLEQEFVKI 399
>gi|452823641|gb|EME30650.1| ATP-dependent RNA helicase DEAD [Galdieria sulphuraria]
Length = 558
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 168/242 (69%), Gaps = 2/242 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+S+F Q+ +SRPLL AI L + PTPIQ IP+AL+GRDIC A TG+GKT AF +PI
Sbjct: 98 DSTFLQLGISRPLLVAIRQLGWEVPTPIQDKVIPLALVGRDICASAVTGSGKTGAFAVPI 157
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
LE+L RV+V++PTREL +Q QV +L++ +++ L++GGL V+ ++ L
Sbjct: 158 LEKLWRSASKVSLVRVIVILPTRELALQCKQVFTELSKNMDIDIELAIGGLAVRAEQDAL 217
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++CPDIVI TPGR++DH+ NT FS+ D+E++VLDEADR+LD F+ +++EIIR CS R
Sbjct: 218 QRCPDIVIGTPGRIIDHIRNTKGFSVDDVEIVVLDEADRLLDLGFSEELEEIIRSCSPKR 277
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEV--RLYNVL 327
QT+LFSATMT +V L +SL P + VD +EV+ L QEFV S+ + V R+ +L
Sbjct: 278 QTLLFSATMTTSVQQLALLSLKEPANIVVDPLYEVSKTLEQEFVLISDGNNVNKRISYLL 337
Query: 328 GL 329
L
Sbjct: 338 AL 339
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/252 (51%), Positives = 164/252 (65%), Gaps = 18/252 (7%)
Query: 71 YEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
Y E G +F ++SF +N+SRPLLKA+ AL Y PTPIQAA IP+AL GRD
Sbjct: 137 YSETPEGTKF--------SSASFADLNISRPLLKAVEALGYKSPTPIQAACIPLALAGRD 188
Query: 131 ICG-----CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
ICG +GKTAAF LP LERLL++PR T VLVL PTREL VQ++ + +L
Sbjct: 189 ICGSAVTG-----SGKTAAFALPFLERLLHRPRGLAATYVLVLTPTRELAVQIHSMIEKL 243
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
AQFT + VAL VGGL ++VQ LR+ P++V+ATPGRL+DHL N+ S L D+ VLVLDE
Sbjct: 244 AQFTDINVALIVGGLSLQVQAITLRQSPEVVVATPGRLIDHLRNSQSVGLEDLAVLVLDE 303
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADR+L+ F ++ E++R R RQTMLFSAT D V DLV++SL +PVR+ D
Sbjct: 304 ADRLLEMGFREEVAEVVRAAPRKRQTMLFSATFNDQVRDLVALSLKQPVRLAADAARAAP 363
Query: 306 LNLRQEFVSFSN 317
L QE V
Sbjct: 364 KLLTQEIVRLKG 375
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 161/222 (72%), Gaps = 1/222 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F+ ++LSRPL +A L Y PTPIQAA IP+AL GRD+CG A TG+GKTAAF LP+LER
Sbjct: 212 FNDLHLSRPLCRACEKLGYATPTPIQAAIIPIALTGRDVCGRAQTGSGKTAAFALPLLER 271
Query: 153 LLYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+L++P++ + V+++VPTREL VQ Q+ ++L ++T+V+VA VGGL ++ Q + LR+
Sbjct: 272 MLHRPKNAVSAIHVVIMVPTRELAVQCAQMIQRLGEYTNVQVATIVGGLSMERQAAALRQ 331
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P+IV+ATPGRL+DH+ NT SF D+ +VLDEADR+L+ F ++KEI+R R RQT
Sbjct: 332 RPEIVVATPGRLIDHVRNTHSFGFEDVAAVVLDEADRLLEMGFLEEIKEIVRNMPRQRQT 391
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+LFSAT+T AV +L S+S+ P R+ D+ + L +E V
Sbjct: 392 LLFSATLTSAVEELASLSMRNPARLSADSLGTTPMTLTEEIV 433
>gi|219122480|ref|XP_002181572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406848|gb|EEC46786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 467
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 159/227 (70%), Gaps = 8/227 (3%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F+Q++LSRPLL+ + A+ ++ PTPIQAA IP+AL GRDIC A TG+GKTAAF+LPILER
Sbjct: 1 FNQLSLSRPLLRGVAAMGFVKPTPIQAAVIPLALAGRDICASAVTGSGKTAAFLLPILER 60
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE-VKVQESVLRK 211
LL+ R T+ ++L PTREL Q + AQFT++ +L VGG + V Q + LR
Sbjct: 61 LLH--RYSGRTKAIILTPTRELAAQCLGMLTSFAQFTNLRASLIVGGAKNVNAQAAELRS 118
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD+++ATPGRLLDH+ N+ +L DIE+LVLDEADR+LD F ++ E+++ C RQT
Sbjct: 119 RPDVIVATPGRLLDHITNSAGVTLEDIEILVLDEADRLLDLGFQDEVHELVKACPVQRQT 178
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNH-----EVALNLRQEFV 313
+LFSATM V+DL+ +S+ RPVRV + + EVA L QEFV
Sbjct: 179 LLFSATMNTKVDDLIQLSMKRPVRVRISDKANSMDIEVAPRLEQEFV 225
>gi|402882297|ref|XP_003904684.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Papio anubis]
Length = 711
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 145/238 (60%), Gaps = 55/238 (23%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC C
Sbjct: 173 GG--FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACC 230
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
+ KP + L
Sbjct: 231 ------------------VGKP-----------------------------------MCL 237
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
+ GL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 238 GLCGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 297
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 298 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFI 355
>gi|2245018|emb|CAB10438.1| RNA helicase like protein [Arabidopsis thaliana]
gi|7268413|emb|CAB78705.1| RNA helicase like protein [Arabidopsis thaliana]
Length = 683
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 171/269 (63%), Gaps = 24/269 (8%)
Query: 67 EAEEYE-ENEGGKEFFEDAPPVEENS-SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPV 124
EA EY+ E+ K FF V ++ +F ++NLSRPLL+A L Y PTPIQ IP
Sbjct: 141 EAAEYKPEDATPKPFFSTVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQVQFIPQ 200
Query: 125 ALLGRDICGCAATGTGK--------------------TAAFMLPILERLLYKPRDDQNTR 164
RD+C A TG+GK TAAF LP LERLL++P+ TR
Sbjct: 201 EW--RDLCASAITGSGKVSTRLMVLCNTEILFRYLTNTAAFALPTLERLLFRPKRVFATR 258
Query: 165 VLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLL 224
VL+L PTREL VQ++ + + LAQFT ++ L VGGL V+ QE VLR PDIV+ATPGR++
Sbjct: 259 VLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMI 318
Query: 225 DHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVND 284
DHL N+ S L D+ VL+LDEADR+L FA+++ E++RLC + RQTMLFSATMT+ V +
Sbjct: 319 DHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKE 378
Query: 285 LVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LV +SL +P+R+ D + L +E++
Sbjct: 379 LVKLSLNKPLRLSADPSARRPPGLTEEYL 407
>gi|358254115|dbj|GAA54145.1| ATP-dependent RNA helicase DDX27 [Clonorchis sinensis]
Length = 586
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 154/223 (69%), Gaps = 3/223 (1%)
Query: 114 PTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPT 171
P PIQ A IPVALL DIC CA TG+GKT AF+LPILERL KP TR LV+ PT
Sbjct: 6 PMPIQCACIPVALLNHDICACARTGSGKTFAFLLPILERLTKKPSGTARSITRALVISPT 65
Query: 172 RELGVQVYQVTRQLAQFT-SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNT 230
REL VQ+++V +L + + + L+ GGL++ QE+ LR PD+VIATPGRL+DHL N
Sbjct: 66 RELAVQIFRVAEKLVAYCPKIRIQLAAGGLDLHTQEASLRLNPDLVIATPGRLIDHLSNA 125
Query: 231 PSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSL 290
P+F+L IE LVLDEAD++LDE+F Q+ EI++ C R RQT+LFSATMT++V +L ++SL
Sbjct: 126 PNFNLQQIEYLVLDEADKLLDEYFVEQISEIVKHCGRQRQTLLFSATMTESVKELATLSL 185
Query: 291 TRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
PV+VF++ VA L+QEF+ E +L +L+R
Sbjct: 186 KNPVQVFLNQTTAVAKRLQQEFIRIRPHREEDRAAILVALLVR 228
>gi|349805347|gb|AEQ18146.1| putative atp-dependent rna helicase ddx27 [Hymenochirus curtipes]
Length = 443
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/147 (74%), Positives = 124/147 (84%), Gaps = 1/147 (0%)
Query: 103 LKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN 162
LKAI A+++ PTPIQ A IPV LLGRDIC CAATGTGKTAAFMLP+LERL+YKP+
Sbjct: 84 LKAISAMSF-QPTPIQKACIPVGLLGRDICACAATGTGKTAAFMLPVLERLMYKPQQAPV 142
Query: 163 TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGR 222
TRVLVLVPTRELG+QV+ VT+QLAQFT V L+VGGL+VK QE+ LR PDI+IATPGR
Sbjct: 143 TRVLVLVPTRELGIQVHAVTKQLAQFTEVTTCLAVGGLDVKTQEAALRSGPDILIATPGR 202
Query: 223 LLDHLHNTPSFSLSDIEVLVLDEADRM 249
L+DHLHN PSFSL IEVL+LDEADRM
Sbjct: 203 LIDHLHNCPSFSLQLIEVLILDEADRM 229
>gi|425770601|gb|EKV09069.1| hypothetical protein PDIP_65800 [Penicillium digitatum Pd1]
gi|425772047|gb|EKV10473.1| hypothetical protein PDIG_56240 [Penicillium digitatum PHI26]
Length = 1500
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 153/222 (68%), Gaps = 18/222 (8%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + NLSRP+L+ + A+ + PTPIQ IPVALLG+DI G A TG+GKTAAF++PILE
Sbjct: 305 TFQEFNLSRPILRGLAAVGFTDPTPIQRKAIPVALLGKDIVGSAVTGSGKTAAFIVPILE 364
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLL++PR +RV+VL+PT Q+ VGG ++ QE+VL+K
Sbjct: 365 RLLFRPRKVPTSRVVVLMPTHVTFCQL------------------VGGFSLREQENVLKK 406
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PD++IATPGR +DH+ N+PSF++ +E+LVLDEADRML++ FA ++ EI+ ++RQT
Sbjct: 407 RPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQT 466
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
MLFSATMTD+++ L+ V + RP+R+ VD L QEFV
Sbjct: 467 MLFSATMTDSIDKLIRVGMNRPMRLMVDAKKNTVSTLIQEFV 508
>gi|302417364|ref|XP_003006513.1| ATP-dependent RNA helicase DRS1 [Verticillium albo-atrum VaMs.102]
gi|261354115|gb|EEY16543.1| ATP-dependent RNA helicase DRS1 [Verticillium albo-atrum VaMs.102]
Length = 757
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/198 (51%), Positives = 146/198 (73%)
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
P TIP+AL+G+D+ G A TG+GKTAAF++PILERLLY+P+ +RV++L PTREL
Sbjct: 253 PGHQKTIPIALMGKDLVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILTPTRELA 312
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
+Q + V +LA +T ++ L+VGGL +K+QE+ LR PD++IATPGR +DH+ N+ SF++
Sbjct: 313 IQCHSVATKLAAYTDIKFTLAVGGLSLKMQEAELRLRPDVIIATPGRFIDHMRNSASFAV 372
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+E+LVLDEADRML++ FA ++ EI+ ++RQTMLFSATMT +V+ L+ V + P R
Sbjct: 373 DAVEILVLDEADRMLEDGFADELNEILTSMPKSRQTMLFSATMTSSVDRLIRVGMNTPAR 432
Query: 296 VFVDNNHEVALNLRQEFV 313
V VD+ + L QEF+
Sbjct: 433 VMVDSQKKTVTTLTQEFI 450
>gi|328856691|gb|EGG05811.1| hypothetical protein MELLADRAFT_43753 [Melampsora larici-populina
98AG31]
Length = 573
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYK-PRDDQNTRVLV 167
++ PTPIQ TIP+ALLG+D+ + TG+GKT +++PI ERL+++ + TRV++
Sbjct: 1 MSVTTPTPIQRQTIPLALLGKDLVCSSMTGSGKTLGYLVPIFERLMWRDKKGGGKTRVMI 60
Query: 168 LVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHL 227
L PTREL VQVYQV + LA++T + +L VGG+ ++ QE+ LR+ P+IV+ TPGR++DH+
Sbjct: 61 LTPTRELAVQVYQVGKSLARYTDLTFSLCVGGMNLRTQEAELRERPEIVVGTPGRVIDHV 120
Query: 228 HNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVS 287
NT FSL +E+LV+DEADR+L+E F +++EII C R+RQTMLFSAT++++V DL
Sbjct: 121 RNTRGFSLDTLEILVIDEADRILEEGFRDELEEIISNCPRSRQTMLFSATVSESVADLAR 180
Query: 288 VSLTRPVRVFVDNNHEVALNLRQEFV 313
+SL +P+R+ +D A L QEF+
Sbjct: 181 LSLEKPIRIKIDPPKSTATGLTQEFL 206
>gi|302142686|emb|CBI19889.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 141/197 (71%), Gaps = 12/197 (6%)
Query: 76 GG--KEFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLG 128
GG K FF A + +SFH ++NLSRPLL+A AL Y PTPIQAA IP+AL G
Sbjct: 107 GGDRKSFFAPA----DGASFHANSFLELNLSRPLLRACEALGYTKPTPIQAACIPIALTG 162
Query: 129 RDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQF 188
RDICG A TG+GKTAAF LP LERLL++P+ Q RVLVL PTREL VQV+ + +LAQF
Sbjct: 163 RDICGSAITGSGKTAAFSLPTLERLLFRPKRVQAIRVLVLTPTRELAVQVHSMMEKLAQF 222
Query: 189 TSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADR 248
T + L VGGL K+QE+ LR PD+V+ATPGR++DHL N+ S L D+ VL+LDEADR
Sbjct: 223 TDIRCCLIVGGLSSKMQETALRSMPDVVVATPGRMIDHLRNSMSVDLEDLAVLILDEADR 282
Query: 249 MLDEHFASQMKEIIRLC 265
+L+ F ++++E +R C
Sbjct: 283 LLELGFNAEIRE-LRCC 298
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
E +RLC + RQTMLFSATMT+ V++LV +S+T+P+R+ D + + L +E V +
Sbjct: 437 EFVRLCPKRRQTMLFSATMTEEVDELVKLSMTKPMRLAADPSTKRPATLTEEVVRIRRMR 496
Query: 320 EVRLYNVL 327
EV VL
Sbjct: 497 EVNQEAVL 504
>gi|223992625|ref|XP_002285996.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977311|gb|EED95637.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 495
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/247 (47%), Positives = 156/247 (63%), Gaps = 25/247 (10%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ LSRPLL+ + ++ ++ PTPIQA+ +PVA+ GRD+C A TG+GKTAAF+LP++E
Sbjct: 3 SFSQLGLSRPLLRGVASMGFVTPTPIQASVLPVAMAGRDVCASAVTGSGKTAAFLLPVME 62
Query: 152 RLLY---------------KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
R+L K TR LVL PTREL Q + +A+FT + AL
Sbjct: 63 RILQRGGGRTTMGGLNAKRKASALAATRALVLTPTRELAAQCVSMMTAMAKFTDLRAALI 122
Query: 197 VGGLE-VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGG + V Q + LR PD+V+ATPGRLLDH+ N+ L D+E L+LDEADR+LD F
Sbjct: 123 VGGAKNVMSQAAELRSRPDVVVATPGRLLDHITNSQGVDLDDLEFLILDEADRLLDLGFQ 182
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV------DN---NHEVAL 306
++ EI++ C RQT+LFSATM+ V+DL+ +SL +PVRV DN EVA
Sbjct: 183 DEVHEIVKACPTERQTLLFSATMSTKVDDLIKLSLKQPVRVQATEKGKKDNAPTGVEVAP 242
Query: 307 NLRQEFV 313
L QEFV
Sbjct: 243 RLEQEFV 249
>gi|385303016|gb|EIF47118.1| nucleolar dead-box protein required for synthesis of 60s ribosomal
subunits [Dekkera bruxellensis AWRI1499]
Length = 410
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 150/206 (72%), Gaps = 4/206 (1%)
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
+G+D+ A TG+GKTAA+++PI+ERLLYKP +TRV+++ PTREL +QV V R+++
Sbjct: 1 MGKDVVAGAQTGSGKTAAYLIPIIERLLYKPAHVASTRVVIMAPTRELAIQVADVARRIS 60
Query: 187 QFTS-VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
QF S + + ++VGGL ++ QE L+K PDIVIATPGR +DH+ N+PSFS+ ++E++VLDE
Sbjct: 61 QFVSGITIGMAVGGLSLRKQELELKKRPDIVIATPGRFIDHVRNSPSFSVDNVEIMVLDE 120
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADRML+E F +++ EI++L + RQTMLFSATM ++DL+ +SL +P R+ +D A
Sbjct: 121 ADRMLEEGFHAEITEILQLLPQKRQTMLFSATMNSNISDLIQLSLQKPARIMIDPPKAAA 180
Query: 306 LNLRQEFVSFSNIDEVR---LYNVLG 328
L QEFV D ++ LY+VL
Sbjct: 181 SGLLQEFVRIRKRDGLKPALLYDVLA 206
>gi|326433021|gb|EGD78591.1| hypothetical protein PTSG_09283 [Salpingoeca sp. ATCC 50818]
Length = 448
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 170/304 (55%), Gaps = 53/304 (17%)
Query: 28 EDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGG---------- 77
E A +E ++NR L+ ++++KRL E K KQ E E E+NEG
Sbjct: 70 ETLAAATEEADRVPLQNRIDLLLERRKKRLEAEMKAKQ-EGGETEDNEGSENEDEDGEEV 128
Query: 78 ---------------------------------KEFFEDAPPVEEN--SSFHQMNLSRPL 102
KEFF D P V+ + SSF +NLSR L
Sbjct: 129 LVDKASTPMAPLPNLDDLEDSDDEIDEEEEQLRKEFFSDTPEVDVSAVSSFSDLNLSRAL 188
Query: 103 LKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN 162
+ + PTPIQA IP+ L+G+D+C CAATG+GKT AF++P L+RL YKP
Sbjct: 189 QVGLTGMGLHKPTPIQARAIPIGLMGKDMCACAATGSGKTLAFLIPALDRLSYKPPGPSV 248
Query: 163 TRVLVLVPTRELGVQVYQVTRQL-AQFTS------VEVALSVGGLEVKVQESVLRKCPDI 215
TRVLVL PTREL QV++ +L A F S + AL +GG +++ +++ PD+
Sbjct: 249 TRVLVLAPTRELAKQVHENAWKLSAMFQSSKKGLNISCALIMGGNKLQADLPIIKARPDV 308
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
++ATPGRL+DH+ NTP F LS +E+L+LDEADR+L+ F +K I++ C RQTMLFS
Sbjct: 309 IVATPGRLVDHIENTPGFDLSTVEILILDEADRLLELGFEDHLKSIVKSCKPDRQTMLFS 368
Query: 276 ATMT 279
ATMT
Sbjct: 369 ATMT 372
>gi|115488568|ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
gi|113649278|dbj|BAF29790.1| Os12g0481100, partial [Oryza sativa Japonica Group]
Length = 832
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 160/291 (54%), Gaps = 71/291 (24%)
Query: 79 EFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+FF + E +SFH ++NLSRPLL+A AL Y PTPIQAA IP+AL GRDICG
Sbjct: 211 KFFASS----EGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICG 266
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA------- 186
A TG+GKTAAF LP+LERLL+
Sbjct: 267 SAITGSGKTAAFSLPVLERLLF-------------------------------RPKRVPA 295
Query: 187 ------------------------QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGR 222
QFT + L VGGL KVQE LR PDIV+ATPGR
Sbjct: 296 IRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGR 355
Query: 223 LLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAV 282
++DHL N+ S L D+ +L+LDEADR+L+ F+++++E+IR+C R RQTMLFSATMT+ +
Sbjct: 356 IIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTMLFSATMTEEI 415
Query: 283 NDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
N+LV++SL +PVR+ D + + L +E V E VL + L+
Sbjct: 416 NELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRAREANQEAVLLALCLK 466
>gi|143454043|sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|125579336|gb|EAZ20482.1| hypothetical protein OsJ_36091 [Oryza sativa Japonica Group]
gi|215706455|dbj|BAG93311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 802
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 160/291 (54%), Gaps = 71/291 (24%)
Query: 79 EFFEDAPPVEENSSFH-----QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
+FF + E +SFH ++NLSRPLL+A AL Y PTPIQAA IP+AL GRDICG
Sbjct: 181 KFFASS----EGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICG 236
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA------- 186
A TG+GKTAAF LP+LERLL+
Sbjct: 237 SAITGSGKTAAFSLPVLERLLF-------------------------------RPKRVPA 265
Query: 187 ------------------------QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGR 222
QFT + L VGGL KVQE LR PDIV+ATPGR
Sbjct: 266 IRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGR 325
Query: 223 LLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAV 282
++DHL N+ S L D+ +L+LDEADR+L+ F+++++E+IR+C R RQTMLFSATMT+ +
Sbjct: 326 IIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTMLFSATMTEEI 385
Query: 283 NDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLR 333
N+LV++SL +PVR+ D + + L +E V E VL + L+
Sbjct: 386 NELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRAREANQEAVLLALCLK 436
>gi|123504635|ref|XP_001328793.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121911741|gb|EAY16570.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 515
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 155/237 (65%), Gaps = 2/237 (0%)
Query: 79 EFFEDAPPVEEN-SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
+FF+ P+ + SF ++ LS +++A+ +N+ PTP+Q TIP+AL GRD+C A T
Sbjct: 3 DFFDTETPLPNDVESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVT 62
Query: 138 GTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
G+GKTAAF++P +ERLL + TR ++L PTREL Q Y V Q+ QFT + L
Sbjct: 63 GSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQFTPLTALLLT 122
Query: 198 GGLE-VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG VK +E L + PD ++ TPGR++DH+ N F+L ++ VLVLDE+DR+L E F S
Sbjct: 123 GGSSNVKEEEERLLEYPDFLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQEGFYS 182
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
Q++E+ + T Q++L +ATM +V+ L +SL +PVR+ +D+ +VA L QEF+
Sbjct: 183 QIEEVHKSLPETTQSILVTATMNSSVSRLAEMSLKKPVRIDLDDVFKVAKGLTQEFI 239
>gi|323454376|gb|EGB10246.1| hypothetical protein AURANDRAFT_23571, partial [Aureococcus
anophagefferens]
Length = 545
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 149/239 (62%), Gaps = 18/239 (7%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F ++ L R LL+A+ AL + PT IQ +P+AL GRD+C AATG+GKTAAF LP+LER
Sbjct: 53 FDELGLCRCLLRAVAALGFSRPTAIQERVVPLALAGRDVCASAATGSGKTAAFGLPLLER 112
Query: 153 LLY--KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL-EVKVQESVL 209
++ R ++L+PTREL Q ++ R L QF+ +VAL VGG +VKVQE L
Sbjct: 113 VVRAKAAHGKPTIRGVILLPTRELAAQCEEMVRGLGQFSGADVALVVGGAKDVKVQELAL 172
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC---- 265
R+ PD+V+ATPGRLLDHL N L D+E VLDEADR+L+ F ++++++
Sbjct: 173 RRKPDVVVATPGRLLDHLTNGRGVHLDDVECCVLDEADRLLELGFEDELRQLLGALPGGS 232
Query: 266 --------SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH---EVALNLRQEFV 313
S TRQTMLFSAT V L ++SL RPVRV V + H VA L Q+FV
Sbjct: 233 ERGKGGRGSGTRQTMLFSATFGAKVESLAALSLVRPVRVRVASGHGAGGVAAKLTQDFV 291
>gi|253744998|gb|EET01115.1| ATP-dependent RNA helicase [Giardia intestinalis ATCC 50581]
Length = 625
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 143/222 (64%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
S+ ++LSRPL +A+ L + +PT +Q IP+ L GRD A TG+GKT AF +P+LE
Sbjct: 2 SWQGLSLSRPLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R++ + +D T LVL PTREL Q V ++LA FT+ V L +GG + Q + LR
Sbjct: 62 RMVLRGKDTYGTTALVLSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRT 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDI++ATPGRL+D + NT +FSL IEVLVLDE D+MLD F ++KEI LC RQT
Sbjct: 122 EPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICTLCPVARQT 181
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+LFSATM V ++L +P++V +D VA + QEFV
Sbjct: 182 LLFSATMQKEVLSFSLLALQKPLQVQIDPPRTVAQTITQEFV 223
>gi|308160612|gb|EFO63089.1| ATP-dependent RNA helicase [Giardia lamblia P15]
Length = 625
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 143/222 (64%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
S+ ++LSR L +A+ L + +PTP+Q IP+ L GRD A TG+GKT AF +P+LE
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTPVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R++ + RD T L+L PTREL Q V ++LA FT+ V L +GG + Q + LR
Sbjct: 62 RMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTARQAAQLRT 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDI++ATPGRL+D + NT +FSL IEVLVLDE D+MLD F ++KEI LC RQT
Sbjct: 122 EPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPIARQT 181
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+LFSAT+ V ++L +P++V +D VA + QEFV
Sbjct: 182 LLFSATIEKEVLSFSLLALQKPLQVQIDPPRTVAQTITQEFV 223
>gi|237842773|ref|XP_002370684.1| DEAD/DEAH box RNA helicase, putative [Toxoplasma gondii ME49]
gi|211968348|gb|EEB03544.1| DEAD/DEAH box RNA helicase, putative [Toxoplasma gondii ME49]
Length = 962
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 13/222 (5%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+++ + LSRPLL+AI L Y +PT IQAA + AL GRD+ A TG+GKTAAF+LP L
Sbjct: 224 TAWGDLPLSRPLLRAIQDLEYAHPTHIQAACLRPALEGRDLLANAQTGSGKTAAFLLPTL 283
Query: 151 ERLLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
ERLL+ P R + T+ LVL+PTREL +Q Q+ + L+++T + AL+
Sbjct: 284 ERLLHSPGVRSRKMTANGPTGGLRGTKALVLLPTRELAMQCVQMLQCLSKYTPITHALAC 343
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+ +K ES LR PDIV+ATPGR+LD L N+P+ L +E++VLDEADR+L+ F +
Sbjct: 344 GGMTLKAHESALRHQPDIVVATPGRILDLLLNSPTVHLELLEIIVLDEADRLLELGFREE 403
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+ I+R C R RQT+LFSAT+T ++ L S++L RP+ + +
Sbjct: 404 ILAILRHCHRARQTLLFSATLTPSIASLASLALNRPLHISAE 445
>gi|221485654|gb|EEE23935.1| DEAD/DEAH box RNA helicase, putative [Toxoplasma gondii GT1]
Length = 962
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 13/222 (5%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+++ + LSRPLL+AI L Y +PT IQAA + AL GRD+ A TG+GKTAAF+LP L
Sbjct: 224 TAWGDLPLSRPLLRAIQDLEYAHPTHIQAACLRPALEGRDLLANAQTGSGKTAAFLLPTL 283
Query: 151 ERLLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
ERLL+ P R + T+ LVL+PTREL +Q Q+ + L+++T + AL+
Sbjct: 284 ERLLHSPGVRSRKMTANGPTGGLRGTKALVLLPTRELAMQCVQMLQCLSKYTPITHALAC 343
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+ +K ES LR PDIV+ATPGR+LD L N+P+ L +E++VLDEADR+L+ F +
Sbjct: 344 GGMTLKAHESALRHQPDIVVATPGRILDLLLNSPTVHLELLEIIVLDEADRLLELGFREE 403
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+ I+R C R RQT+LFSAT+T ++ L S++L RP+ + +
Sbjct: 404 ILAILRHCHRARQTLLFSATLTPSIASLASLALNRPLHISAE 445
>gi|221502971|gb|EEE28681.1| DEAD/DEAH box RNA helicase, putative [Toxoplasma gondii VEG]
Length = 959
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 149/222 (67%), Gaps = 13/222 (5%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+++ + LSRPLL+AI L Y +PT IQAA + AL GRD+ A TG+GKTAAF+LP L
Sbjct: 221 TAWGDLPLSRPLLRAIQDLEYAHPTHIQAACLRPALEGRDLLANAQTGSGKTAAFLLPTL 280
Query: 151 ERLLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
ERLL+ P R + T+ LVL+PTREL +Q Q+ + L+++T + AL+
Sbjct: 281 ERLLHSPGVRSRKMTANGPTGGLRGTKALVLLPTRELAMQCVQMLQCLSKYTPITHALAC 340
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+ +K ES LR PDIV+ATPGR+LD L N+P+ L +E++VLDEADR+L+ F +
Sbjct: 341 GGMTLKAHESALRHQPDIVVATPGRILDLLLNSPTVHLELLEIIVLDEADRLLELGFREE 400
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+ I+R C R RQT+LFSAT+T ++ L S++L RP+ + +
Sbjct: 401 ILAILRHCHRARQTLLFSATLTPSIASLASLALNRPLHISAE 442
>gi|401412566|ref|XP_003885730.1| putative DEAD/DEAH box RNA helicase [Neospora caninum Liverpool]
gi|325120150|emb|CBZ55704.1| putative DEAD/DEAH box RNA helicase [Neospora caninum Liverpool]
Length = 969
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 149/223 (66%), Gaps = 13/223 (5%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++ + LSRPLL+AI L Y +PT IQAA + AL GRD+ A TG+GKTAAF+LP
Sbjct: 230 QTAWGDLPLSRPLLRAIQDLEYAHPTHIQAACLRPALEGRDLLANAQTGSGKTAAFLLPT 289
Query: 150 LERLLYKPR-------------DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
LERLL+ P + T+ LVL+PTREL +Q Q+ + L+++T V AL+
Sbjct: 290 LERLLHSPGVRTRKMTPNGPAGGLRGTKALVLLPTRELAMQCVQMLQCLSKYTPVTHALA 349
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG+ +K E+ LR+ PDIV+ATPGR+LD L N+P+ L +E++VLDEADR+L+ F
Sbjct: 350 CGGMTLKAHENALRQQPDIVVATPGRILDLLLNSPTVHLELLEIIVLDEADRLLELGFRE 409
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
++ I+R C R RQT+LFSAT+T ++ L S++L RP+ + +
Sbjct: 410 EILAILRHCHRARQTLLFSATLTPSIASLASLALNRPLHISAE 452
>gi|159114905|ref|XP_001707676.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
gi|157435783|gb|EDO80002.1| ATP-dependent RNA helicase [Giardia lamblia ATCC 50803]
Length = 625
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 143/225 (63%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
S+ ++LSR L +A+ L + +PT +Q IP+ L GRD A TG+GKT AF +P+LE
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R++ + RD T L+L PTREL Q V ++LA FT+ V L +GG + Q + LR
Sbjct: 62 RMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRT 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
PDI++ATPGRL+D + NT +FSL IEVLVLDE D+MLD F ++KEI LC RQT
Sbjct: 122 EPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPVARQT 181
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
+LFSATM V ++L +P++V +D VA + QEFV +
Sbjct: 182 LLFSATMEKEVLSFSLLALQKPLQVQIDPPRTVAQTITQEFVMIT 226
>gi|449018026|dbj|BAM81428.1| probable ATP dependent RNA helicase [Cyanidioschyzon merolae strain
10D]
Length = 703
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 155/267 (58%), Gaps = 38/267 (14%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
V ++ S+ + LS +L+ + +L ++ PTPIQA IPVAL GRD+ G A TG+GKTAAF+
Sbjct: 136 VRQSESWAALALSPRMLRVVESLGWMQPTPIQAQAIPVALAGRDVLGSAVTGSGKTAAFL 195
Query: 147 LPILERLLYKPRDD-----------QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVA- 194
+PI+ERL R D RVL+++PTREL VQ + V + T+ E A
Sbjct: 196 IPIIERLYRAQRADGVRFAADASQTAAIRVLIVLPTRELAVQCHAVLEAICDRTARESAR 255
Query: 195 ---------------------LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSF 233
L VGGL +K QE LR PDI+I TPGR++DH N P+F
Sbjct: 256 RMKQGVAKFVGTPEQTRLRSVLLVGGLALKPQELALRHVPDIIIGTPGRIIDHARNAPNF 315
Query: 234 SLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT---RQTMLFSATMTDAVNDLVSVSL 290
+L D+E+LVLDEADR+L F +++E++RLC+ + RQTMLFSAT+ V +L +L
Sbjct: 316 TLDDVEILVLDEADRLLQMGFMDELREVVRLCAASAPYRQTMLFSATLDAGVEELARFAL 375
Query: 291 T--RPVRVFVDNNHEVALNLRQEFVSF 315
R V V VD ++ L QEFV
Sbjct: 376 APDRVVTVRVDATFDLVGTLVQEFVKL 402
>gi|118351203|ref|XP_001008880.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89290647|gb|EAR88635.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 643
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 141/205 (68%), Gaps = 1/205 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
++ + L +PLLKA+ + Y +PT IQ+ IP AL G+D+ + TG+GKTAAF++PIL+
Sbjct: 191 TWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQ 250
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+ P + ++ L++ PTREL Q+Y+V +L ++T + L +G ++ QE+ LR
Sbjct: 251 KFYRSPFTNY-SKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAELRG 309
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P+++IATPGRL+DHL N+ S L ++EVL+ DEAD++LD F + + I+ C+R RQT
Sbjct: 310 NPEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNIVENCNRERQT 369
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRV 296
+LFSAT+T VN L+ ++L +P+R+
Sbjct: 370 LLFSATLTSEVNKLIDIALRKPIRI 394
>gi|145481669|ref|XP_001426857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393934|emb|CAK59459.1| unnamed protein product [Paramecium tetraurelia]
Length = 542
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 183/297 (61%), Gaps = 11/297 (3%)
Query: 21 EDDVDAEEDFALPDDEMKHDNIKNRQKLIGK--KKQK---RLAKEGK--LKQVEAEEYEE 73
+ D D D P +++K ++ Q I K K QK + K+ K +++V+ EE +E
Sbjct: 17 QKDFDFYADLLNPAEKLKKRIQQSTQNQINKLVKSQKLNEKTQKKSKQLVQKVKNEEVQE 76
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
N + D N+ F Q+ L++ L+KA Y YPT IQA +P+ L G+D+
Sbjct: 77 NVKPQY---DPKIFATNTDFQQLKLNKSLVKACHEQGYKYPTKIQAQIVPLVLAGKDVLA 133
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
+ TG+GKTAAF+LP+++R + + ++ L+++PTREL +Q +++ ++L QF+
Sbjct: 134 SSCTGSGKTAAFLLPLMQRF-GNTKSQKYSKALIVMPTRELALQCFEMFQKLNQFSHCTA 192
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
AL +G + ++ QE+ LR+ PDI+IATPGR++D + N+ S LS IEVLVLDEADR+++
Sbjct: 193 ALVIGAVPIQQQEAELRRYPDIIIATPGRIVDIMKNSFSIDLSSIEVLVLDEADRLMEMG 252
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
F +++KEI++ R RQT+L SAT+ V L ++L +PV+V VD +A L+Q
Sbjct: 253 FEAEIKEILQQTPRDRQTVLVSATLKATVKQLSLLALHKPVKVSVDYVDGLAYGLKQ 309
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 164/291 (56%), Gaps = 9/291 (3%)
Query: 30 FALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYE-ENEGGKEFFEDAPPVE 88
F ++ HD K ++ ++ +K + + +Q E E E +E EDAP
Sbjct: 2 FGAKRRKVAHDAPKKKKPVVAEKPARAEPEPSDDEQSEEESATLEEPSAEEAVEDAP--- 58
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
+F + + L +A LNY YPTPIQ +IPVAL GRDI G A TG+GKTAAF LP
Sbjct: 59 -KKTFKDLGIVDALCEACEKLNYKYPTPIQEKSIPVALEGRDIIGLAETGSGKTAAFALP 117
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+L+ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q
Sbjct: 118 VLQALLDKP---QPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAIA 174
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K P I++ATPGRL+DHL T FSL ++ L++DEADR+LD F + +I++ R
Sbjct: 175 LGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILKFIPRE 234
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFVSFSNI 318
R+T LFSAT++ + L SL PVRV + +N ++ L Q ++ ++
Sbjct: 235 RRTYLFSATISSKIESLQRASLRDPVRVSISSNKYQTVSTLLQHYIFIPHV 285
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 152/247 (61%), Gaps = 5/247 (2%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
+P EE+ SF ++ + L A L + PT IQ +IP+AL G+DI G A TG+GKTA
Sbjct: 76 SPSKEEDKSFAELGVIDQLCDACANLGFTKPTAIQKESIPIALEGKDIIGLAETGSGKTA 135
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL+ L+ P+ +Q+ LVL PTREL Q+ Q L +V A+ VGG+++
Sbjct: 136 AFALPILQALMAAPQHEQHKFGLVLAPTRELAYQISQQFEALGSLINVRCAVLVGGMDMV 195
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P IV+ATPGRLLDHL NT FS+ ++ LV+DEADR+LD F + +I++
Sbjct: 196 PQAIALNKNPHIVVATPGRLLDHLENTKGFSMRSLKYLVMDEADRLLDLDFGPILDKILQ 255
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV----SFSNI 318
+ R+TMLFSATM+ +N+L +L PVRV + ++++ NL Q ++ F +I
Sbjct: 256 VLPSKRRTMLFSATMSTKLNNLTRAALQNPVRVSISSSSYQTVKNLMQRYIFIPHKFKDI 315
Query: 319 DEVRLYN 325
V L N
Sbjct: 316 YLVYLLN 322
>gi|358399923|gb|EHK49260.1| hypothetical protein TRIATDRAFT_143973 [Trichoderma atroviride IMI
206040]
Length = 479
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 154/277 (55%), Gaps = 7/277 (2%)
Query: 41 NIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGK---EFFEDAPPVEENSSFHQMN 97
N RQK+ +R E Q + + E E DA EE +F ++
Sbjct: 2 NGSKRQKVANGAPARREPAEATASQTSPDPHTEEESVTLDVASTADAAEAEEPKTFKELG 61
Query: 98 LSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKP 157
+ L +A +LNY PT IQA +IPVAL GRD+ G A TG+GKTAAF LPIL+ LL KP
Sbjct: 62 IVDSLCEACESLNYKTPTSIQARSIPVALQGRDVIGLAETGSGKTAAFALPILQALLEKP 121
Query: 158 RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVI 217
Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q L K P I++
Sbjct: 122 ---QPFFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVPQAIALGKKPHIIV 178
Query: 218 ATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSAT 277
ATPGRL+DHL T FSL ++ LV+DEADR+LD F + +I++ R R+T LFSAT
Sbjct: 179 ATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPRERRTYLFSAT 238
Query: 278 MTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
M+ V L SL P RV V +N ++ L Q +V
Sbjct: 239 MSSKVESLQRASLRDPARVSVSSNKYQTVSTLLQHYV 275
>gi|326481966|gb|EGE05976.1| 2-isopropylmalate synthase [Trichophyton equinum CBS 127.97]
Length = 638
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 131/189 (69%), Gaps = 7/189 (3%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEEN-------SSFHQMNLSRPLLKAIGALNYIYPTPIQA 119
E+E+ +E EFF V E+ +SF ++LSRP+L+ + ++ + PTPIQ
Sbjct: 265 ESEDDDEIRKQNEFFAPEDQVTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQR 324
Query: 120 ATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVY 179
TIPVALLG+D+ G A TG+GKT AF++PILERLLY+PR +RV +L+PTREL VQ Y
Sbjct: 325 KTIPVALLGKDVVGGAVTGSGKTGAFIVPILERLLYRPRKVPTSRVAILMPTRELAVQCY 384
Query: 180 QVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIE 239
V +LA FT + VGG ++ QE++L+K PD++IATPGR +DH+ N+ SF++ +E
Sbjct: 385 NVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLE 444
Query: 240 VLVLDEADR 248
+LVLDEAD+
Sbjct: 445 ILVLDEADQ 453
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 147/247 (59%), Gaps = 10/247 (4%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP +F + ++ L +A ALNY YPTPIQ +IPVAL GRDI G A TG+GKT
Sbjct: 61 DAP----KKTFKDLGVNDALCEACEALNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKT 116
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LP+L+ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++
Sbjct: 117 AAFALPVLQALLDKP---QPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDM 173
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P I++ATPGRL+DHL T FSL ++ L++DEADR+LD F + +I+
Sbjct: 174 VPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKIL 233
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQE--FVSFSNID 319
+ R R+T LFSAT++ + L SL PVRV + +N ++ L Q F+ F D
Sbjct: 234 KFIPRERRTYLFSATLSSKIESLQRASLRDPVRVSISSNKYQTVSTLIQHYMFIPFPQKD 293
Query: 320 EVRLYNV 326
+Y V
Sbjct: 294 TYLVYLV 300
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 136/222 (61%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ + L +A + Y PTPIQ+ IP+AL GRD+ G A TG+GKTAAF LP+L+
Sbjct: 47 SFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQ 106
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ P Q LVL PTREL Q+ Q L V A+ VGG+++ Q L K
Sbjct: 107 ALMEAP---QTLFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGK 163
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ L +DEADR+LD F + +IIR+ RTR T
Sbjct: 164 KPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHT 223
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATM+ V L SL+ PVRV V + ++ L+ ++
Sbjct: 224 YLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYI 265
>gi|197116587|ref|YP_002137014.1| ATP-dependent RNA helicase RhlE [Geobacter bemidjiensis Bem]
gi|197085947|gb|ACH37218.1| ATP-dependent RNA helicase RhlE [Geobacter bemidjiensis Bem]
Length = 453
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF +NLS P+LKAI A Y PTPIQA +IP+AL GRD+ G A TGTGKTA+F+LP LE
Sbjct: 2 SFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPALE 61
Query: 152 RLLY-KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RLL P + R+LVL PTREL +QV R +F V +GG+ + Q +L
Sbjct: 62 RLLTPSPLRGKGPRILVLTPTRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLLA 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRL+DHL + S + S +E+LVLDEADRMLD F+ + I RQ
Sbjct: 122 QPVDIIVATPGRLIDHL-DRRSINFSRLEMLVLDEADRMLDMGFSEDVDRIANAAPAERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
T+LF+ATM DA+ L L PVRV V+ L + Q
Sbjct: 181 TLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRL 222
>gi|402218296|gb|EJT98373.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 476
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/245 (44%), Positives = 147/245 (60%), Gaps = 4/245 (1%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
AP + N +F + L PL+ A LN+ PTPIQAA IP AL G+DI G A TG+GKTA
Sbjct: 32 APVADPNVTFSSLGLIEPLVDACKQLNFKRPTPIQAAAIPPALEGKDIIGLAETGSGKTA 91
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL++L + P+ +VL PTREL Q+ Q L V A+ +GG+++
Sbjct: 92 AFALPILQKLWHDPKP---FFCVVLAPTRELAYQISQQFEALGSTIGVRCAVLIGGVKMV 148
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P IV+ATPGRL DHL NT FSL ++ LV+DEADR+LD F + +++
Sbjct: 149 PQAVALSKRPHIVVATPGRLQDHLENTKGFSLRGLKYLVMDEADRLLDLDFGPIIDTLLK 208
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV-SFSNIDEVR 322
R R TMLFSATMT V L SL PV+V V + ++ L Q +V + + + E +
Sbjct: 209 AIPRQRNTMLFSATMTTKVAKLQRTSLRNPVKVEVSSKYQTVSTLLQTYVLTPAAVKEPQ 268
Query: 323 LYNVL 327
L ++L
Sbjct: 269 LVHLL 273
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 150/249 (60%), Gaps = 4/249 (1%)
Query: 66 VEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
V + E E +E E+ + +F + + L A +L Y PTPIQA +IP+A
Sbjct: 24 VSSGSEREQEAPEESGEEPADTKAPKTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLA 83
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L GRD+ G A TG+GKTAAF LPIL+ L+ KP Q LVL PTREL VQ+ + L
Sbjct: 84 LQGRDLVGLAETGSGKTAAFALPILQALMEKP---QPYFGLVLAPTRELAVQISEAFEAL 140
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
SV A+ VGG+++ Q L K P I++ATPGRLLDHL NT FSL +++ LV+DE
Sbjct: 141 GSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDE 200
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEV 304
ADR+LD F + +I+++ R R+T LFSAT++ V L SL+ P+RV + +N ++
Sbjct: 201 ADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQT 260
Query: 305 ALNLRQEFV 313
L Q ++
Sbjct: 261 VSTLLQSYI 269
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 139/231 (60%), Gaps = 5/231 (2%)
Query: 75 EGGKEFFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
E KE + P EE SF + + PL +A AL + PTPIQ IP+AL GRD+
Sbjct: 92 EATKEGQTELPSKEETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVI 151
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKTAAF LPIL+ LL KP Q LVL PTREL Q+ Q L S+
Sbjct: 152 GIAETGSGKTAAFALPILQSLLEKP---QPLFGLVLAPTRELAAQIGQTFEALGASISLR 208
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
A+ VGGL++ Q + L K P IV+ATPGRLLDHL T FSL ++ LV+DEADR+LD
Sbjct: 209 CAVVVGGLDMVSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDL 268
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
F + +I++ R R+T LFSATM+ V L SL P++V V ++ E
Sbjct: 269 DFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQE 319
>gi|253698823|ref|YP_003020012.1| DEAD/DEAH box helicase [Geobacter sp. M21]
gi|251773673|gb|ACT16254.1| DEAD/DEAH box helicase domain protein [Geobacter sp. M21]
Length = 449
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 137/222 (61%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF +NLS P+LKAI A Y PTPIQA +IP+AL GRD+ G A TGTGKTA+F+LP LE
Sbjct: 2 SFETLNLSAPILKAIQACGYTQPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPALE 61
Query: 152 RLLY-KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RLL P + R+LVL PTREL +QV R +F V +GG+ + Q +L
Sbjct: 62 RLLTPSPLRGKGPRILVLTPTRELAIQVVDAVRSYGKFMRVRCGSILGGMPYRDQMMLLA 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRL+DHL + S + S +E+LVLDEADRMLD F+ + I RQ
Sbjct: 122 QPVDIIVATPGRLIDHL-DRRSINFSRLEMLVLDEADRMLDMGFSDDVDRIADAAPAERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
T+LF+ATM DA+ L L PVRV V+ L + Q
Sbjct: 181 TLLFTATMDDAMAKLAQRLLKDPVRVAVEGTEVANLQIEQRL 222
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 139/231 (60%), Gaps = 5/231 (2%)
Query: 75 EGGKEFFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
E KE + P EE SF + + PL +A AL + PTPIQ IP+AL GRD+
Sbjct: 116 EATKEGQTELPSKEETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVI 175
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKTAAF LPIL+ LL KP Q LVL PTREL Q+ Q L S+
Sbjct: 176 GIAETGSGKTAAFALPILQSLLEKP---QPLFGLVLAPTRELAAQIGQTFEALGASISLR 232
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
A+ VGGL++ Q + L K P IV+ATPGRLLDHL T FSL ++ LV+DEADR+LD
Sbjct: 233 CAVVVGGLDMVSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDL 292
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
F + +I++ R R+T LFSATM+ V L SL P++V V ++ E
Sbjct: 293 DFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQE 343
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 142/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A AL Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 60 SFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 119
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ + L SV A+ VGG+++ Q L K
Sbjct: 120 ALMNKP---QSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGK 176
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 177 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 236
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 237 YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYL 279
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 142/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A AL Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 60 SFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 119
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ + L SV A+ VGG+++ Q L K
Sbjct: 120 ALMNKP---QSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGK 176
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 177 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 236
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 237 YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYL 279
>gi|322417740|ref|YP_004196963.1| DEAD/DEAH box helicase [Geobacter sp. M18]
gi|320124127|gb|ADW11687.1| DEAD/DEAH box helicase domain protein [Geobacter sp. M18]
Length = 442
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 136/222 (61%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF +NLS PL+KAI A Y PTPIQA +IP+AL GRD+ G A TGTGKTA+F+LP LE
Sbjct: 2 SFESLNLSAPLVKAINACGYTEPTPIQAESIPLALSGRDLIGSAQTGTGKTASFVLPALE 61
Query: 152 RLLY-KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RLL P + R+LVL PTREL QV + +F V +GG+ + Q +L
Sbjct: 62 RLLVPSPARGKGPRILVLTPTRELANQVVDAVKTYGKFMRVRCGSILGGMPYREQMMLLS 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRL+DHL S + S +E+LVLDEADRMLD F+ + I RQ
Sbjct: 122 QPVDIIVATPGRLIDHLDRR-SINFSRLEMLVLDEADRMLDMGFSEDVDRIAAAAPAERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
T+LF+ATM DA+ L L PVRV VD L++ Q
Sbjct: 181 TLLFTATMDDAMAKLAQRLLKDPVRVAVDGQQLTNLSIEQRL 222
>gi|403352245|gb|EJY75628.1| ATP-dependent RNA helicase Has1 [Oxytricha trifallax]
Length = 650
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 187/341 (54%), Gaps = 20/341 (5%)
Query: 2 DSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNI---KNRQKLIGKKKQKRLA 58
+S ++ + E+ D E S+ED+ D ++ L D + + R + K + +
Sbjct: 83 ESDEDSSDNEELNDQESSDEDE-DPRDNVKLRSRSQSQDEVAAAQRRSRTNSKDQTQSAL 141
Query: 59 KEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQ 118
K K E + EEN+ E+F N F + LS KAI Y T IQ
Sbjct: 142 KNSKQSIKEDVKVEENKLNDEYFS-------NLEFKDLPLSEQTQKAIEQFGYKKSTEIQ 194
Query: 119 AATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ--NTRVLVLVPTRELGV 176
A +IP AL GRD+ G A TG+GKT AFM+P +E LLYK + Q T V+++ PTREL +
Sbjct: 195 ARSIPHALNGRDVLGAAKTGSGKTLAFMIPAVE-LLYKAQFTQKKGTGVIIIAPTRELAM 253
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
Q Y+ R L Q+ S + +GG + + ++L+K ++++ATPGRLLDHL NTP F
Sbjct: 254 QNYKWARDLLQYHSKTHGVVIGGAKRSSEANMLKKGVNLLVATPGRLLDHLQNTPGFLFH 313
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
++++L++DEAD +L F +M +II+L + R T LFSATMT V DL +SL PV +
Sbjct: 314 NLQMLIIDEADAILKVGFEEEMNQIIKLLPKERVTCLFSATMTKKVEDLCRLSLKNPVLI 373
Query: 297 FV--DNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLREN 335
V D+N NL Q +V ID + + +L L++N
Sbjct: 374 EVSKDSNTSTVSNLEQGYVV---IDPAKKFQLL-FTFLKKN 410
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/233 (45%), Positives = 142/233 (60%), Gaps = 6/233 (2%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
+DAP ++ SF + + L++A AL Y +PTPIQ +IP+AL GRD+ G A TG+GK
Sbjct: 54 DDAPVAKK--SFADLGVVESLVEATEALGYKHPTPIQEKSIPLALAGRDVIGLAETGSGK 111
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
TAAF LP+L+ LL KP +V+ PTREL Q+ Q L ++ A+ VGGL+
Sbjct: 112 TAAFALPVLQALLEKP---SGLFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLD 168
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P +V+ATPGRLLDHL T FSL ++ LVLDEADR+LD F + +I
Sbjct: 169 MVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKI 228
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
++ R R T LFSATM+ V L SL P RV V +N ++V L Q F+
Sbjct: 229 LKFIPRERHTYLFSATMSSKVESLQRASLKDPARVSVQSNGYQVVSTLLQNFL 281
>gi|66475988|ref|XP_627810.1| Drs1p, eIF4a-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|46229323|gb|EAK90172.1| Drs1p, eIF4a-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
Length = 573
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 153/251 (60%), Gaps = 21/251 (8%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
+ + LSRPLLKA+ LN++ T IQ IP+AL GRDI A TG+GKTAAF+LP LER
Sbjct: 32 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER 91
Query: 153 LLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV-ALSVG 198
LL P R+ + T+VLVL+P+REL +Q + V L ++ V A+ G
Sbjct: 92 LLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTG 151
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+ ++ QE +L+ P IVIATPGR+LD L NT S L +E+++LDEADR+LD F +
Sbjct: 152 GMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQEC 211
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
EI++ SRTRQTMLFSAT++ +V DL ++L P +V + L+ S +
Sbjct: 212 LEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKV-------STVGLKSGIKSVGSS 264
Query: 319 DEVRLYNVLGL 329
E L ++ GL
Sbjct: 265 GESELLSITGL 275
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 141/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A AL Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 60 SFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 119
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ + L SV A+ VGG+++ Q L K
Sbjct: 120 ALMNKP---QSLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGK 176
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 177 KPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 236
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 237 YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQSYL 279
>gi|32399059|emb|CAD98299.1| DEAD/DEAH box RNA helicase, possible [Cryptosporidium parvum]
Length = 543
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 153/251 (60%), Gaps = 21/251 (8%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
+ + LSRPLLKA+ LN++ T IQ IP+AL GRDI A TG+GKTAAF+LP LER
Sbjct: 2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER 61
Query: 153 LLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV-ALSVG 198
LL P R+ + T+VLVL+P+REL +Q + V L ++ V A+ G
Sbjct: 62 LLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTG 121
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+ ++ QE +L+ P IVIATPGR+LD L NT S L +E+++LDEADR+LD F +
Sbjct: 122 GMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQEC 181
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
EI++ SRTRQTMLFSAT++ +V DL ++L P +V + L+ S +
Sbjct: 182 LEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKV-------STVGLKSGIKSVGSS 234
Query: 319 DEVRLYNVLGL 329
E L ++ GL
Sbjct: 235 GESELLSITGL 245
>gi|67618387|ref|XP_667590.1| DEAD/DEAH box RNA helicase [Cryptosporidium hominis TU502]
gi|54658742|gb|EAL37362.1| DEAD/DEAH box RNA helicase [Cryptosporidium hominis]
Length = 543
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 142/218 (65%), Gaps = 14/218 (6%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
+ + LSRPLLKA+ LN++ T IQ IP+AL GRDI A TG+GKTAAF+LP LER
Sbjct: 2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER 61
Query: 153 LLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV-ALSVG 198
LL P R+ + T+VLVL+P+REL +Q + V L ++ V A+ G
Sbjct: 62 LLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTG 121
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+ ++ QE +L+ P IVIATPGR+LD L NT S L +E+++LDEADR+LD F +
Sbjct: 122 GMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQEC 181
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
EI++ SRTRQTMLFSAT++ +V DL ++L P +V
Sbjct: 182 LEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKV 219
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 158/268 (58%), Gaps = 4/268 (1%)
Query: 47 KLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAI 106
K I ++K + + + V + E E +E E+ + +F + + L A
Sbjct: 5 KNIKRRKLSHTSSKPAPEDVSSGSERERETPEESDEEPADTKAPKTFKDLGIIDSLCDAC 64
Query: 107 GALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVL 166
+L Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+ L+ KP Q L
Sbjct: 65 TSLGYKNPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPILQALMEKP---QPYFGL 121
Query: 167 VLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDH 226
VL PTREL VQ+ + L SV A+ VGG+++ Q L K P I++ATPGRLLDH
Sbjct: 122 VLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDH 181
Query: 227 LHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLV 286
L NT FSL +++ LV+DEADR+LD F + +I+++ R R+T LFSAT++ V L
Sbjct: 182 LENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQ 241
Query: 287 SVSLTRPVRVFVDNN-HEVALNLRQEFV 313
SL+ P+RV + +N ++ L Q ++
Sbjct: 242 RASLSNPLRVSISSNKYQTVSTLLQSYI 269
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 138/231 (59%), Gaps = 5/231 (2%)
Query: 75 EGGKEFFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
E KE + P EE SF + + PL +A AL + PTPIQ IP+AL GRD+
Sbjct: 92 EATKEGQTELPSKEETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVI 151
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKTAAF LPIL+ LL KP Q LVL PTREL Q+ Q L S+
Sbjct: 152 GIAETGSGKTAAFALPILQSLLEKP---QPLFGLVLAPTRELAAQIGQTFEALGASISLR 208
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
A+ VGGL++ Q L K P IV+ATPGRLLDHL T FSL ++ LV+DEADR+LD
Sbjct: 209 CAVVVGGLDMVSQSIALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDL 268
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
F + +I++ R R+T LFSATM+ V L SL P++V V ++ E
Sbjct: 269 DFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQE 319
>gi|323509459|dbj|BAJ77622.1| cgd6_4830 [Cryptosporidium parvum]
Length = 532
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 153/251 (60%), Gaps = 21/251 (8%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
+ + LSRPLLKA+ LN++ T IQ IP+AL GRDI A TG+GKTAAF+LP LER
Sbjct: 2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER 61
Query: 153 LLYKP--RDDQ-----------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV-ALSVG 198
LL P R+ + T+VLVL+P+REL +Q + V L ++ V A+ G
Sbjct: 62 LLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTG 121
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+ ++ QE +L+ P IVIATPGR+LD L NT S L +E+++LDEADR+LD F +
Sbjct: 122 GMNIQQQERILKCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQEC 181
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
EI++ SRTRQTMLFSAT++ +V DL ++L P +V + L+ S +
Sbjct: 182 LEILKYSSRTRQTMLFSATLSRSVTDLALLALNNPCKV-------STVGLKSGIKSVGSS 234
Query: 319 DEVRLYNVLGL 329
E L ++ GL
Sbjct: 235 GESELLSITGL 245
>gi|398995582|ref|ZP_10698462.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
gi|398129619|gb|EJM18978.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
Length = 448
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILHR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVAECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + D+V+ L P + V+N ++ RQ+ ++ N+ + ++ N L
Sbjct: 181 LFSATTGGSGLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIITADHNVHKEQILNWL 237
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 141/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L A +L Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 50 SFKDLGIIDSLCDACTSLRYKAPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPILQ 109
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q LVL PTREL VQ+ + L SV A+ VGG+++ Q L K
Sbjct: 110 ALMEKP---QPYFGLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMDMISQSISLGK 166
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 167 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKVLPRERRT 226
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSAT++ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 227 YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYI 269
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 141/227 (62%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F ++ + L +A +LNY +PT IQA +IPVAL GRD+ G A TG+GKTAAF L
Sbjct: 53 EEPKTFKELGIVDSLCEACESLNYKHPTSIQAKSIPVALQGRDVIGLAETGSGKTAAFAL 112
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q
Sbjct: 113 PILQALLEKP---QPLFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDMVPQAI 169
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I++ATPGRL+DHL T FSL ++ LV+DEADR+LD F + +I++ R
Sbjct: 170 ALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPR 229
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
R+T LFSAT++ V L SL PVRV V ++ ++ L Q ++
Sbjct: 230 ERRTYLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYI 276
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L A +L Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 50 TFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPILQ 109
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q LVL PTREL VQ+ + L SV A+ VGG+++ Q L K
Sbjct: 110 ALMEKP---QPYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGK 166
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 167 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKVLPRERRT 226
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSAT++ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 227 YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYI 269
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L A +L Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 50 TFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLALQGRDLVGLAETGSGKTAAFALPILQ 109
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q LVL PTREL VQ+ + L SV A+ VGG+++ Q L K
Sbjct: 110 ALMEKP---QPYFGLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGK 166
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 167 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPVLDKILKVLPRERRT 226
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSAT++ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 227 YLFSATLSSKVESLQRASLSNPLRVSISSNKYQTVSTLLQSYI 269
>gi|325180097|emb|CCA14499.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 836
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 147/236 (62%), Gaps = 9/236 (3%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + LS P+ +A+ A+ Y PTPIQ ++P+ L G+D+ G A TG+GK+AAF++P++E+
Sbjct: 28 FQHLGLSNPVYRAVMAMGYKVPTPIQRKSLPLILSGKDVVGMARTGSGKSAAFLIPLIEK 87
Query: 153 LLYKPRDDQNTRV----LVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L + +TRV LVL PTREL +Q Q T+ LA++TS+ V+L VGG ++ Q S
Sbjct: 88 L-----KEHSTRVGLRGLVLAPTRELALQTLQFTKGLAKYTSLRVSLIVGGEGMEQQFSA 142
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L PDI++ATPGRL+ HL P F+L +E +V DEADR+ + FA Q+ EI+
Sbjct: 143 LASNPDILVATPGRLMHHLQEIPDFNLKSVEYVVFDEADRLFEMGFADQLHEILSQMPPN 202
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
RQT+LFSAT+ + L P + +D ++++ NL+ F + + D+ ++
Sbjct: 203 RQTLLFSATLPSVLAQFARAGLNEPAMIRLDVENKMSENLKMAFFTVRSDDKPAVF 258
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 149/248 (60%), Gaps = 8/248 (3%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
E E+ EG E + P +F + + L A +L Y PTPIQA +IP+AL
Sbjct: 29 ELEQEALEEGSDETADTKVP----KTFKDLGIIDSLCDACTSLGYKAPTPIQAESIPLAL 84
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
GRD+ G A TG+GKTAAF LPIL+ L+ KP Q LVL PTREL VQ+ + L
Sbjct: 85 QGRDLVGLAETGSGKTAAFALPILQALMEKP---QPYFGLVLAPTRELAVQISESFEALG 141
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
SV A+ VGG+++ Q L K P I++ATPGRLLDHL NT FSL +++ LV+DEA
Sbjct: 142 SLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEA 201
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVA 305
DR+LD F + +I+++ R R+T LFSAT++ V L SL+ P+RV + +N ++
Sbjct: 202 DRLLDLDFGPVLDKILKVLPRERRTYLFSATLSSKVESLQRASLSNPLRVSISSNKYQTV 261
Query: 306 LNLRQEFV 313
L Q ++
Sbjct: 262 STLLQSYI 269
>gi|388546779|ref|ZP_10150051.1| DEAD/DEAH box helicase-like protein [Pseudomonas sp. M47T1]
gi|388275103|gb|EIK94693.1| DEAD/DEAH box helicase-like protein [Pseudomonas sp. M47T1]
Length = 445
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 149/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ LN++ PTP+Q A IP+A+ GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFPLHERLLKAVAELNFVEPTPVQVAAIPLAVQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + R ++L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVEIRAVILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+HL N + LS +EVLVLDEADRMLD F+ + + C QT+
Sbjct: 122 PDILIGTPGRLLEHL-NAGNLDLSKVEVLVLDEADRMLDMGFSEDVTRLSEECKDRAQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + D++S L P + ++N ++A RQ+ V+ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLRDMMSKVLKDPEHLLINNVSQLAEGTRQQIVTADHNVHKEQILNWL 237
>gi|294944705|ref|XP_002784389.1| ATP-dependent RNA helicase DRS1, putative [Perkinsus marinus ATCC
50983]
gi|239897423|gb|EER16185.1| ATP-dependent RNA helicase DRS1, putative [Perkinsus marinus ATCC
50983]
Length = 720
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 149/247 (60%), Gaps = 16/247 (6%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
+E + ++ + LSRP+L+ + AL + PTP+Q IPVAL +DI A TG+GKT F+
Sbjct: 129 LETHVAWASLQLSRPVLRGLNALGFAEPTPVQRDVIPVALRSQDILAMAETGSGKTGGFL 188
Query: 147 LPILERL-----LYKPRDDQNT----------RVLVLVPTRELGVQVYQVTRQLAQFTSV 191
LPI+ERL + R D +T + LVL+PTREL VQ Y++ R +F +
Sbjct: 189 LPIVERLCQASHVRSRRKDPHTGRITGGRAATKALVLLPTRELAVQCYKMLRDFTKFAPL 248
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
L VGG + + Q S +R PD+V+ATPGR+LD L N+P+ L E++VLDE DR+L+
Sbjct: 249 TSCLVVGGFDAQKQASEMRAQPDVVLATPGRVLDLLLNSPNIHLEMCEIVVLDECDRLLE 308
Query: 252 EHFASQMKEII-RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
F + II + C+R+RQTM+FSATM V L V L++PV + + V+ L Q
Sbjct: 309 MGFRDECLTIIQKHCNRSRQTMMFSATMNQEVLKLAKVVLSKPVTIETTKANRVSPTLTQ 368
Query: 311 EFVSFSN 317
EF+ ++
Sbjct: 369 EFIRVTS 375
>gi|402083740|gb|EJT78758.1| ATP-dependent rRNA helicase RRP3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 485
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + PL +A AL Y PTPIQ IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 58 TFKDLGIVDPLCEACEALGYKQPTPIQTQAIPLALQGRDVIGIAETGSGKTAAFALPILQ 117
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q L K
Sbjct: 118 SLLDKP---QPLFGLVLAPTRELAAQIGQAFEALGSLISLRCAVVVGGLDMVSQSIALGK 174
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +V+ATPGRLLDHL T FSL ++ LV+DEADR+LD F + +I++ R R+T
Sbjct: 175 KPHVVVATPGRLLDHLEKTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKFLPRERRT 234
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
LFSATM+ V L SL P+RV V + E
Sbjct: 235 YLFSATMSSKVESLQRASLRDPLRVSVSSKRE 266
>gi|348685911|gb|EGZ25726.1| hypothetical protein PHYSODRAFT_486355 [Phytophthora sojae]
Length = 852
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 151/244 (61%), Gaps = 5/244 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
F + LS P+ + + A+ Y PTPIQ ++P+ L G+D A TG+GKTAAF++P+L
Sbjct: 36 GGFQHLGLSPPVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLIPML 95
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
E+L + R +VL PTREL VQ + +QL++FTS+++AL VGG + Q +
Sbjct: 96 EKL-KEHSTKIGVRAVVLSPTRELAVQTLRFAKQLSKFTSLKMALIVGGEGMDQQFEAIA 154
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD+++ATPGRL+ HL P F+L +E +V DEADR+ + FA Q++EI++ +RQ
Sbjct: 155 ANPDVLVATPGRLMHHLQEIPDFNLKAVEYVVFDEADRIFEMGFAEQLQEILKNMPTSRQ 214
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
T+LFSAT+ A+ L+ P + +D ++++ NL+ F + ++D+ L+ L
Sbjct: 215 TLLFSATLPKALVQFARAGLSDPELIRLDVENKISENLKMAFFTVRSLDKPALF----LY 270
Query: 331 LLRE 334
++RE
Sbjct: 271 MVRE 274
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 148/244 (60%), Gaps = 10/244 (4%)
Query: 65 QVEAEE-YEENEGGKEFFEDAPPVEE------NSSFHQMNLSRPLLKAIGALNYIYPTPI 117
Q EAE+ + ++E E+ P +E SF + + L +A +L Y PT I
Sbjct: 15 QGEAEDGFSDSETSPASLEETPGNDEKIEATTTKSFKDLGIIDSLCEACDSLGYKAPTQI 74
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
QA +IP+AL GRD+ G A TG+GKTAAF LPIL+ L+ KP Q+ LVL PTREL Q
Sbjct: 75 QAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP---QSMFGLVLAPTRELAYQ 131
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
+ Q L SV A+ VGG+++ Q L K P I++ATPGRLLDHL NT FSL
Sbjct: 132 ISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRS 191
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
++ LV+DEADR+LD F + +I+++ + R+T LFSATM+ V L SL+ P+RV
Sbjct: 192 LKYLVMDEADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVS 251
Query: 298 VDNN 301
V +N
Sbjct: 252 VSSN 255
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 151/252 (59%), Gaps = 10/252 (3%)
Query: 63 LKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATI 122
++ +A++ EE E K F E A N+ HQ + L +A L Y PT IQA +I
Sbjct: 36 VEAAQADDKEEAEPPKTFKELA-----NTPHHQ-GIVDALCEACETLGYKTPTGIQAQSI 89
Query: 123 PVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVT 182
PVAL GRD+ G A TG+GKTAAF LP+L+ LL KP Q LVL PTREL Q+ Q
Sbjct: 90 PVALQGRDVIGLAETGSGKTAAFALPVLQALLDKP---QPLFGLVLAPTRELAAQIGQTF 146
Query: 183 RQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
L S+ A+ VGGL++ Q L K P +++ATPGRL+DHL T FSL ++ LV
Sbjct: 147 EALGALISLRCAVIVGGLDMVPQAVALGKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLV 206
Query: 243 LDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD-NN 301
LDEADR+LD F ++++++ R R+T LFSATM+ +V L SL PVRV V +
Sbjct: 207 LDEADRLLDMDFGESIEKLLKFIPRERRTYLFSATMSSSVESLQRASLRDPVRVSVSASK 266
Query: 302 HEVALNLRQEFV 313
++ L+Q +V
Sbjct: 267 YQTVSTLKQHYV 278
>gi|303317380|ref|XP_003068692.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108373|gb|EER26547.1| ATP-dependent rRNA helicase RRP3, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 474
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 148/244 (60%), Gaps = 10/244 (4%)
Query: 65 QVEAEE-YEENEGGKEFFEDAPPVEE------NSSFHQMNLSRPLLKAIGALNYIYPTPI 117
Q EAE+ + ++E E+ P +E SF + + L +A +L Y PT I
Sbjct: 15 QGEAEDGFSDSETSPASLEETPGNDEKIEATTTKSFKDLGIIDSLCEACDSLGYKAPTQI 74
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
QA +IP+AL GRD+ G A TG+GKTAAF LPIL+ L+ KP Q+ LVL PTREL Q
Sbjct: 75 QAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP---QSMFGLVLAPTRELAYQ 131
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
+ Q L SV A+ VGG+++ Q L K P I++ATPGRLLDHL NT FSL
Sbjct: 132 ISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRS 191
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
++ LV+DEADR+LD F + +I+++ + R+T LFSATM+ V L SL+ P+RV
Sbjct: 192 LKYLVMDEADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVS 251
Query: 298 VDNN 301
V +N
Sbjct: 252 VSSN 255
>gi|226288804|gb|EEH44316.1| ATP-dependent rRNA helicase RRP3 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 6/231 (2%)
Query: 86 PVEENS--SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
P EE + SF + + L +A AL Y PTPIQ IP+AL GRD+ G A TG+GKTA
Sbjct: 49 PQEETATKSFKDLGVIDSLCEACEALGYKTPTPIQTEAIPLALQGRDLIGLAETGSGKTA 108
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL+ L+ KP Q+ LVL PTREL Q+ + L SV A+ VGG+++
Sbjct: 109 AFALPILQALMDKP---QSLFGLVLAPTRELAYQISEAFEALGSLISVRCAVIVGGMDMV 165
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I++
Sbjct: 166 PQAIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILK 225
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+ R R+T LFSATM+ V L SL+ P+RV + ++ ++ L Q F+
Sbjct: 226 VLPRERRTYLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVSTLLQTFL 276
>gi|403223642|dbj|BAM41772.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 567
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 154/241 (63%), Gaps = 17/241 (7%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N ++ +L + LLKAI L Y +PT IQ IP+AL G+D+ A TG+GKTA+F++P
Sbjct: 70 NLNWSDFSLCKSLLKAIYELGYEHPTLIQTKVIPLALEGKDLLVTAETGSGKTASFVIPT 129
Query: 150 LERLL----YKPRDDQN--------TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
L+RL+ K R N T+VLV++PTREL Q Y+V + L+++ + AL
Sbjct: 130 LQRLVASGFIKQRTKDNYTHGLRHGTKVLVILPTRELAAQCYEVYKSLSKYLTTNAALLT 189
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+ +K QE+ L++ PD +I TPGR LD L N+ S ++ +IEV+++DEAD++L+ F +
Sbjct: 190 GGIPIKEQENKLKQIPDTIICTPGRALDMLLNSSSINVENIEVVIMDEADKLLELGFRDE 249
Query: 258 MK-----EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
++ ++ C+R RQTMLFSAT+T+ +LV++S+T PV V VD +V+ L E
Sbjct: 250 VRPKRKSKMKNFCNRNRQTMLFSATLTEETKELVNLSMTNPVYVKVDEPTKVSKTLEFEM 309
Query: 313 V 313
+
Sbjct: 310 L 310
>gi|119186961|ref|XP_001244087.1| hypothetical protein CIMG_03528 [Coccidioides immitis RS]
gi|118595828|sp|Q1E1N5.1|RRP3_COCIM RecName: Full=ATP-dependent rRNA helicase RRP3
gi|392870806|gb|EAS32639.2| ATP-dependent rRNA helicase RRP3 [Coccidioides immitis RS]
Length = 474
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 149/244 (61%), Gaps = 10/244 (4%)
Query: 65 QVEAEE-YEENEGGKEFFEDAPPVEE------NSSFHQMNLSRPLLKAIGALNYIYPTPI 117
Q EAE+ + ++E + ++ P +E SF + + L +A +L Y PT I
Sbjct: 15 QGEAEDGFSDSETSQASLQETPGNDEKIEATTTKSFKDLGIIDSLCEACDSLGYKAPTQI 74
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
QA +IP+AL GRD+ G A TG+GKTAAF LPIL+ L+ KP Q+ LVL PTREL Q
Sbjct: 75 QAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP---QSMFGLVLAPTRELAYQ 131
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
+ Q L SV A+ VGG+++ Q L K P I++ATPGRLLDHL NT FSL
Sbjct: 132 ISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRS 191
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
++ LV+DEADR+LD F + +I+++ + R+T LFSATM+ V L SL+ P+RV
Sbjct: 192 LKYLVMDEADRLLDLDFGPILDKILKVLPKERRTYLFSATMSSKVESLQRASLSNPLRVS 251
Query: 298 VDNN 301
V +N
Sbjct: 252 VSSN 255
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 141/232 (60%), Gaps = 8/232 (3%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP +F + ++ L +A LNY YPTPIQ +IPVAL GRDI G A TG+GKT
Sbjct: 56 DAP----KKTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKT 111
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LP+L+ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++
Sbjct: 112 AAFALPVLQALLDKP---QPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDM 168
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P IV+ATPGRL+DHL T FSL ++ L++DEADR+LD F + +I+
Sbjct: 169 VPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKIL 228
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+ R R+T LFSAT++ + L SL PV+V + +N ++ L Q ++
Sbjct: 229 KFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQNYL 280
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 147/241 (60%), Gaps = 8/241 (3%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F + + L +A AL + PT IQ IP+AL G+DI G A TG+GKTAAF LPI
Sbjct: 35 DKTFADLGVVDSLCEACTALGFTKPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPI 94
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L+ LL KP Q LVL PTREL Q+ Q L SV A+ VGG+++ Q L
Sbjct: 95 LQELLDKP---QPMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVPQAIAL 151
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
K P IV+ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I ++ R R
Sbjct: 152 AKKPHIVVATPGRLLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKIFQVLPRER 211
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV----SFSNIDEVRLY 324
+TMLFSATM+ +N+L +L +PV+V + ++++ NL Q ++ F +I V L
Sbjct: 212 RTMLFSATMSTKLNNLTRAALQQPVKVSISSSSYQTVKNLMQRYIFIPHKFKDIYLVYLL 271
Query: 325 N 325
N
Sbjct: 272 N 272
>gi|229591936|ref|YP_002874055.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
gi|229363802|emb|CAY51237.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
Length = 456
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 156/250 (62%), Gaps = 9/250 (3%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFE AP F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+
Sbjct: 3 FFEVAP------VFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGS 56
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF+LPIL RL+ + + + L+L+PTREL Q + + +QFT ++ L GG
Sbjct: 57 GKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGG 116
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+ KVQ ++LRK PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++
Sbjct: 117 EDFKVQAAMLRKVPDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQ 175
Query: 260 EIIRLCSRTRQTMLFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SN 317
++ C +QTMLFSAT + + ++V+ L P + V+N ++ RQ+ V+ N
Sbjct: 176 RLVAECINRQQTMLFSATTGGSTLREMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHN 235
Query: 318 IDEVRLYNVL 327
+ + ++ N L
Sbjct: 236 VHKEQILNWL 245
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 142/232 (61%), Gaps = 6/232 (2%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
+AP EE +F ++ + L +A +LNY PT IQA IPVAL GRD+ G A TG+GKT
Sbjct: 52 EAP--EEPKTFKELGIVDSLCEACESLNYKRPTAIQAKAIPVALQGRDVIGLAETGSGKT 109
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL+ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++
Sbjct: 110 AAFALPILQALLEKP---QPLFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGLDM 166
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P I++ATPGRL+DHL T FSL ++ LV+DEADR+LD F + +I+
Sbjct: 167 VPQAIALGKKPHIIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKIL 226
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+ R R+T LFSAT++ V L SL PVRV V ++ ++ L Q ++
Sbjct: 227 KFIPRERRTYLFSATLSSKVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYI 278
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 141/232 (60%), Gaps = 8/232 (3%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP +F + ++ L +A LNY YPTPIQ +IPVAL GRDI G A TG+GKT
Sbjct: 56 DAP----KKTFKDLGVNDALCEACEKLNYKYPTPIQEQSIPVALQGRDIIGLAETGSGKT 111
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LP+L+ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++
Sbjct: 112 AAFALPVLQALLDKP---QPLFGLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDM 168
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P I++ATPGRL+DHL T FSL ++ L++DEADR+LD F + +I+
Sbjct: 169 VPQSIALGKKPHIIVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKIL 228
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+ R R+T LFSAT++ + L SL PV+V + +N ++ L Q ++
Sbjct: 229 KFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQHYL 280
>gi|448532819|ref|XP_003870508.1| Has1 protein [Candida orthopsilosis Co 90-125]
gi|380354863|emb|CCG24379.1| Has1 protein [Candida orthopsilosis]
Length = 573
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 184/311 (59%), Gaps = 27/311 (8%)
Query: 4 SDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKH------DNIKNRQKLIGKKKQ--- 54
S + K ++++E + +VD E+ DDE +IK+ ++ KKQ
Sbjct: 18 SSKHSKKRTRDESESESDVEVDTEKAVDQLDDEFDEVAGLLGQDIKDPEEKEANKKQAED 77
Query: 55 -KRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIY 113
KRL + K K V++ E + ++ ED P E+N SF + S P +KAI + +
Sbjct: 78 EKRLQELTKPKVVDSTETKGDD------EDEP--EDNYSFEKAEFSEPTMKAIREMGFKK 129
Query: 114 PTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY----KPRDDQNTRVLVLV 169
T +QA TIP L GRD+ G A TG+GKT AF++P +E LLY KPR+ T V+++
Sbjct: 130 MTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE-LLYSLKIKPRN--GTAVIIIT 186
Query: 170 PTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHN 229
PTREL +Q++ V RQL + S + +GG + + + + L K ++++ATPGRLLDHL N
Sbjct: 187 PTRELALQIFGVARQLMEHHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKN 246
Query: 230 TPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSV 288
T F S+++ L++DEADR+L+ F +MK+II+ L + RQTMLFSAT T V DL +
Sbjct: 247 TQGFVFSNLKALIIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKVEDLARI 306
Query: 289 SLTRPVRVFVD 299
SL RP ++++
Sbjct: 307 SL-RPGPLYIN 316
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 138/231 (59%), Gaps = 5/231 (2%)
Query: 75 EGGKEFFEDAPPVEEN--SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
E KE + P EE SF + + PL +A AL + PTPIQ IP+AL GRD+
Sbjct: 92 EATKEGQTELPSKEETPTKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVI 151
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKTAAF LPIL+ LL KP Q LVL PTREL Q+ Q L S+
Sbjct: 152 GIAETGSGKTAAFALPILQSLLEKP---QPLFGLVLAPTRELAAQIGQTFEALGASISLR 208
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
A+ VGGL++ Q L K P IV+ATPGRLLDHL T FSL ++ LV+DEADR+LD
Sbjct: 209 CAVVVGGLDMVSQSIALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDL 268
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
F + +I++ R R+T LFSATM+ V L SL P++V V ++ E
Sbjct: 269 DFGPILDKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSSQE 319
>gi|226944026|ref|YP_002799099.1| ATP-dependent DEAD/DEAH box helicase [Azotobacter vinelandii DJ]
gi|226718953|gb|ACO78124.1| ATP-dependent DEAD/DEAH box helicase [Azotobacter vinelandii DJ]
Length = 439
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ LN++ PTP+QAA IP AL G D+ A TG+GKTAAF+LP+L
Sbjct: 2 FSQFALHERLLKALAELNFVEPTPVQAAAIPPALEGHDLRVIARTGSGKTAAFVLPLLNG 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ R + R L+L+PTREL Q + + +QFT ++ L GG KVQ ++LRK
Sbjct: 62 LIGDARPRVSIRALILLPTRELAQQTLKEVERFSQFTFIKSGLVTGGENFKVQAALLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+HL N L D+EVLVLDEADRMLD FA ++ ++ C+ RQT+
Sbjct: 122 PDILIGTPGRLLEHL-NAGHLDLRDVEVLVLDEADRMLDMGFAEDVQRLVESCANRRQTL 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++ E++ RQ+ V+
Sbjct: 181 LFSATTGGSGLREMVAKVLREPRHLMLNAVGELSETTRQQIVT 223
>gi|313231896|emb|CBY09008.1| unnamed protein product [Oikopleura dioica]
Length = 250
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 127/188 (67%), Gaps = 23/188 (12%)
Query: 79 EFFEDA--PPVE-ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
EFFE+ P E E SF R LLKA+ + + PTPIQ A+IPVA+ GRDIC CA
Sbjct: 82 EFFENWVKPDDEDEKDSFADYGFERKLLKALANVGWTTPTPIQKASIPVAVTGRDICACA 141
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL-AQFTSVEVA 194
TG+ ++ TRVLVL+PTREL VQV+ V R+L A+ +V VA
Sbjct: 142 TTGSVESC-------------------TRVLVLLPTRELCVQVFAVFRKLVAELENVTVA 182
Query: 195 LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHF 254
+ GGL++ Q VLR+ PDI++ATPGRL+DHLHNTP+FSL +IE+LVLDEADRMLDE F
Sbjct: 183 CAAGGLDLVQQTQVLRRDPDILVATPGRLIDHLHNTPNFSLQEIEILVLDEADRMLDEFF 242
Query: 255 ASQMKEII 262
ASQMKEI+
Sbjct: 243 ASQMKEIL 250
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 140/223 (62%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A + Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 53 SFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 112
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ + L +V A+ VGG+++ Q L K
Sbjct: 113 ALMEKP---QSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGK 169
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 170 KPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRT 229
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV V +N ++ L Q ++
Sbjct: 230 FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYL 272
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 162/319 (50%), Gaps = 32/319 (10%)
Query: 10 KEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAE 69
K K++ GSE +D DA L D K DN + K K VE +
Sbjct: 10 KRAKKEESGSESEDNDAIAQEIL--DTTKSDNEEEEPKKSSKN----------YTSVEVD 57
Query: 70 EYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
E EE + +F + + + + L + PTPIQA +IP AL GR
Sbjct: 58 ESEE---------------QTKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGR 102
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
DI G A TG+GKTAAF +P+L+ L P Q +VL PTREL Q+ + L
Sbjct: 103 DIIGLAQTGSGKTAAFAIPVLQSLYENP---QPLYCVVLAPTRELAYQISETFEALGSAM 159
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
+ A+ VGG+ + Q L K P +++ATPGRL+DHL NT FSL ++ LV+DEADR+
Sbjct: 160 GLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADRL 219
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
LD F + +I+++ R R T LFSATMT V L SL PVRV V ++ A NL
Sbjct: 220 LDMEFGPSLDKILKVIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAVSTKYQTADNLL 279
Query: 310 QE--FVSFSNIDEVRLYNV 326
Q F F + D +Y V
Sbjct: 280 QYMVFCPFKHKDTHLVYLV 298
>gi|395648526|ref|ZP_10436376.1| ATP-dependent RNA helicase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 448
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ V+ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWL 237
>gi|395500069|ref|ZP_10431648.1| DEAD/DEAH box helicase [Pseudomonas sp. PAMC 25886]
Length = 448
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 152/237 (64%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ +++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVQECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ ++ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNSTTRQQIITADHNVHKEQILNWL 237
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 140/223 (62%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A + Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 53 SFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 112
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ + L +V A+ VGG+++ Q L K
Sbjct: 113 ALMEKP---QSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGK 169
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 170 KPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRT 229
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV V +N ++ L Q ++
Sbjct: 230 FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYL 272
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 139/229 (60%), Gaps = 5/229 (2%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
PV + S F + + L++A AL Y +PTPIQ +IP+AL GRD+ G A TG+GKTAAF
Sbjct: 57 PVAKKS-FADLGVVESLVEATEALGYKHPTPIQEKSIPLALEGRDVIGLAETGSGKTAAF 115
Query: 146 MLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
LP+L+ LL KP +V+ PTREL Q+ Q L ++ A+ VGGL++ Q
Sbjct: 116 ALPVLQALLEKP---SGLFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQ 172
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
L K P +V+ATPGRLLDHL T FSL ++ LVLDEADR+LD F + +I++
Sbjct: 173 AIALGKKPHVVVATPGRLLDHLEKTKGFSLRSLKYLVLDEADRLLDMDFGPSIDKILKFI 232
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
R R T LFSATM+ V L SL P RV V +N ++V L Q ++
Sbjct: 233 PRERHTYLFSATMSSKVESLQRASLKDPARVSVQSNGYQVVSTLLQNYL 281
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 142/236 (60%), Gaps = 8/236 (3%)
Query: 82 EDAPPVEENS----SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAAT 137
+D P E SF + + L +A + Y PTPIQA +IP+AL RD+ G A T
Sbjct: 40 QDGPESSETKPAPKSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAET 99
Query: 138 GTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
G+GKTAAF LPIL+ L+ KP Q+ LVL PTREL Q+ Q L +V A+ V
Sbjct: 100 GSGKTAAFALPILQALMDKP---QSFFGLVLAPTRELAFQISQSFEALGSTINVRCAVIV 156
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+++ Q L K P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F
Sbjct: 157 GGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPL 216
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEF 312
+ +I+++ R R+T LFSATM+ V L SL+ P+RV V +N ++ L Q +
Sbjct: 217 LDKILKILPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSY 272
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 154/271 (56%), Gaps = 3/271 (1%)
Query: 47 KLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAI 106
KL+ +K +K K+ K V + E E E +D ++ +F ++NL L++AI
Sbjct: 20 KLLAEKIKKNALKQKKQAPVTEKPEEIVETTSEASQDVNSEQQFHTFLELNLVPELMEAI 79
Query: 107 GALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVL 166
L Y PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL+ L R L
Sbjct: 80 EKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQRP---YYAL 136
Query: 167 VLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDH 226
VL PTREL Q+ + L V VGG+++ Q L + P I++ATPGR++DH
Sbjct: 137 VLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDH 196
Query: 227 LHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLV 286
L NT FSL ++ LV+DEADR+LD F + +I+++ R T LFSATMT+ + L
Sbjct: 197 LENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPTKRTTYLFSATMTNKIAKLQ 256
Query: 287 SVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
SL PV+V V N ++ A NL Q + S+
Sbjct: 257 RASLHEPVKVAVSNKYQTADNLVQSMMLVSD 287
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 139/230 (60%), Gaps = 7/230 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
APP +F + L +PLL+++ LN+ PT IQ +P AL GRDI G AATG+GKTA
Sbjct: 14 APP----PTFESLGLIKPLLESLEQLNFKIPTEIQVEALPHALEGRDIIGVAATGSGKTA 69
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL++L +P+ VL PTREL Q+ Q L A+ VGG+++
Sbjct: 70 AFGLPILQKLWEEPK---GLFACVLAPTRELAYQISQQLESLGSAMGARCAVIVGGMDMP 126
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P IV+ATPGRL+DHL T F+L +I+ LVLDEADR+LD F + + +I++
Sbjct: 127 AQAIALAKRPHIVVATPGRLMDHLEKTKGFNLRNIKFLVLDEADRLLDLDFGTIIDKILK 186
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
L + R T LFSATMT V L SL+ PVRV V ++ L Q ++
Sbjct: 187 LIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVSTKYQTVSTLLQYYL 236
>gi|398857768|ref|ZP_10613465.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM79]
gi|398905928|ref|ZP_10653194.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM50]
gi|398173884|gb|EJM61699.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM50]
gi|398240326|gb|EJN26009.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM79]
Length = 448
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVEECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++N ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNNVSDLNATTRQQIIT 223
>gi|444318663|ref|XP_004179989.1| hypothetical protein TBLA_0C06780 [Tetrapisispora blattae CBS 6284]
gi|387513030|emb|CCH60470.1| hypothetical protein TBLA_0C06780 [Tetrapisispora blattae CBS 6284]
Length = 496
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 147/232 (63%), Gaps = 9/232 (3%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E ++F +NLS P LKAIG L++ T +QA TIP L GRD+ G A TG+GKT AF++P
Sbjct: 30 ETTAFADLNLSEPTLKAIGKLDFTEMTAVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIP 89
Query: 149 ---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
+L L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 90 AIEMLHSLKFKPRN--GTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQE 147
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-L 264
L K +I+IATPGRLLDHL NT F +++ LV+DEADR+L+ F +MK+II+ L
Sbjct: 148 ADKLVKGVNILIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKIL 207
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRP---VRVFVDNNHEVALNLRQEFV 313
+ RQ+MLFSAT T V DL +SL + + V +N+ A L Q +V
Sbjct: 208 PNEDRQSMLFSATQTTKVEDLARISLRKGPLFINVVPENDTSTADGLEQGYV 259
>gi|398941979|ref|ZP_10670072.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM41(2012)]
gi|398161344|gb|EJM49580.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM41(2012)]
Length = 448
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVEECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++N ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNNVSDLNATTRQQIIT 223
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 151/272 (55%), Gaps = 8/272 (2%)
Query: 43 KNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPL 102
K +QK + +KQ R E EA E E E A P E SSF +++L L
Sbjct: 22 KIKQKALENRKQSR---EESQATEEANTASETEAA-VIEETAEPEEGFSSFRELDLVPEL 77
Query: 103 LKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN 162
++A LN+ PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL RL + D Q
Sbjct: 78 IEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRLWH---DQQP 134
Query: 163 TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGR 222
+L PTREL Q+ + L V VGG+ + Q L + P I+IATPGR
Sbjct: 135 YYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGR 194
Query: 223 LLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDA 281
L+DHL NT F+L ++ LV+DEADR+LD F + I++ + ++ R T LFSATMT
Sbjct: 195 LMDHLENTKGFALRKLQFLVMDEADRLLDMEFGPVLDRILKNIPTKGRTTYLFSATMTSK 254
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ L SLT PV+ V N ++ L Q +
Sbjct: 255 IDKLQRASLTNPVKCAVSNKYQTVDTLVQTLI 286
>gi|440736789|ref|ZP_20916374.1| ATP-dependent RNA helicase [Pseudomonas fluorescens BRIP34879]
gi|440382721|gb|ELQ19213.1| ATP-dependent RNA helicase [Pseudomonas fluorescens BRIP34879]
Length = 448
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVSECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV-SFSNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ V + N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVMADHNVHKEQILNWL 237
>gi|392308167|ref|ZP_10270701.1| ATP-dependent RNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 411
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 143/245 (58%), Gaps = 4/245 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + L+ L +A+ L + PTPIQ +IP+ L G D+ A TGTGKTAAFMLPIL
Sbjct: 2 SFQPLQLAPELDQALTTLQFSAPTPIQQQSIPLVLEGHDLLATAQTGTGKTAAFMLPILH 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P + R LVL PTREL QV + AQ+T ++VA GG + QE L+
Sbjct: 62 CLLKAPEQNSKVRALVLAPTRELAQQVAANSEDYAQYTGLKVACIYGGANISPQEKALKA 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D+VIATPGRLLDHL + L ++ LV DEADRMLD F ++K I+R +QT
Sbjct: 122 GVDVVIATPGRLLDHLIKG-TLKLENVSHLVFDEADRMLDMGFIGEIKRIMRHLPEQKQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLML 331
+LFSAT+ + V L S LT+P RV VD + A + Q F + +D+ R ++ ++
Sbjct: 181 LLFSATLDEQVQKLASQWLTKPQRVGVDPENSAAEKVEQLFYA---VDDDRKRELMSHLI 237
Query: 332 LRENC 336
+ N
Sbjct: 238 GKNNW 242
>gi|146283021|ref|YP_001173174.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri A1501]
gi|145571226|gb|ABP80332.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri A1501]
Length = 455
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 147/227 (64%), Gaps = 2/227 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 14 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 73
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 74 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 133
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRL++HL N S L D+E+LV+DEADRMLD FA M+ ++ C + +QT+
Sbjct: 134 PDVLIGTPGRLIEHL-NAGSLILKDVEILVIDEADRMLDMGFAEDMQRLVGECQKRQQTL 192
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
LFSAT A + ++V+ L P+ + ++ E+ + RQ+ ++ ++
Sbjct: 193 LFSATSGGAGLREMVAKVLRDPLHLQLNRVSELNESTRQQIITADDV 239
>gi|388468344|ref|ZP_10142554.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
gi|388011924|gb|EIK73111.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
Length = 448
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ + GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVAECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ V+ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWL 237
>gi|71029534|ref|XP_764410.1| DEAD box RNA helicase [Theileria parva strain Muguga]
gi|68351364|gb|EAN32127.1| DEAD box RNA helicase, putative [Theileria parva]
Length = 543
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 151/236 (63%), Gaps = 12/236 (5%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N ++ L R +L+AI + Y PT IQ+ IP+AL G+D+ A TG+GKTA+F++P
Sbjct: 74 NLNWSDFGLCRSILRAISEMGYQNPTIIQSKVIPLALEGKDLLVTAETGSGKTASFLIPT 133
Query: 150 LERL--------LYKPRDDQNTR----VLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
L+RL L + QN+R LV++PTREL Q + V + L+++ S + L
Sbjct: 134 LQRLVVSGVLKQLTNEKQVQNSRFGTKALVILPTRELAAQCFNVFKLLSKYLSSKSILLT 193
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+ +K QES LR+ P+ +I TPGR LD L N+ S ++ +IEV+++DEAD++L+ F +
Sbjct: 194 GGIPIKEQESRLRQFPESIICTPGRALDMLMNSSSINVENIEVVIMDEADKLLELGFRDE 253
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++++ C+R RQTMLFSAT+T+ +LVS+SL PV V VD+ +V+ L E +
Sbjct: 254 CLQVLKYCNRNRQTMLFSATLTEETKELVSLSLVNPVYVKVDDPTKVSKTLEFEML 309
>gi|447917697|ref|YP_007398265.1| ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
gi|445201560|gb|AGE26769.1| ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
Length = 448
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVSECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV-SFSNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ V + N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVMADHNVHKEQILNWL 237
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A L Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 57 SFKDLGIIDSLCEACETLGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 116
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ L SV A+ VGG+++ Q L K
Sbjct: 117 ALMEKP---QSLFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDMVPQAIALGK 173
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IV+ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 174 KPHIVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 233
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV + ++ ++ L Q ++
Sbjct: 234 YLFSATMSSKVESLQRASLSNPLRVSISSSKYQTVSTLLQSYL 276
>gi|423692871|ref|ZP_17667391.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
gi|387997844|gb|EIK59173.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
Length = 448
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ + GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ V+ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWL 237
>gi|387894976|ref|YP_006325273.1| DEAD/DEAH box helicase [Pseudomonas fluorescens A506]
gi|387163383|gb|AFJ58582.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
A506]
Length = 448
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ + GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVGECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + D+V+ L P + V+N ++ RQ+ V+ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWL 237
>gi|398878534|ref|ZP_10633653.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM67]
gi|398886701|ref|ZP_10641564.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM60]
gi|398188549|gb|EJM75850.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM60]
gi|398199789|gb|EJM86722.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM67]
Length = 448
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++N ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNNVSDLNATTRQQIIT 223
>gi|398838810|ref|ZP_10596069.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM102]
gi|398114480|gb|EJM04299.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM102]
Length = 448
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 144/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++N ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNNVSDLNATTRQQIIT 223
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 158/275 (57%), Gaps = 21/275 (7%)
Query: 53 KQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPP-------------VEENSSFHQMNLS 99
K++++A+E + E++ ++E EDA P + SF ++ L
Sbjct: 5 KKRKIAREAP----QQEDHSDSEAHSSASEDAAPNTTEQEQEPSEAPKQAPKSFKELGLI 60
Query: 100 RPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRD 159
L +A ++ Y PT IQA IP+AL GRD+ G A TG+GKTAAF LPIL+ L+ KP
Sbjct: 61 EQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-- 118
Query: 160 DQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIAT 219
+ LVL PTREL Q+ Q L SV + VGG+++ Q L K P I++AT
Sbjct: 119 -SSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVAT 177
Query: 220 PGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMT 279
PGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T LFSATM+
Sbjct: 178 PGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVLPRERRTYLFSATMS 237
Query: 280 DAVNDLVSVSLTRPVRVFVDNNH-EVALNLRQEFV 313
V L SL P+RV V ++ + L+Q ++
Sbjct: 238 SKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYI 272
>gi|397686167|ref|YP_006523486.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 10701]
gi|395807723|gb|AFN77128.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 10701]
Length = 448
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 149/228 (65%), Gaps = 2/228 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q+A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQSAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + +QFT ++ A+ GG + KVQ ++LRK
Sbjct: 62 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAILRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++HL N + L D+E+L+LDEADRMLD FA ++ ++ C++ +QT+
Sbjct: 122 PDILIGTPGRMIEHL-NAGTLILKDVELLILDEADRMLDMGFADDVQRLVNECAKRQQTL 180
Query: 273 LFSATMTDAVNDLVSVSLTR-PVRVFVDNNHEVALNLRQEFVSFSNID 319
LFSAT A ++ S+ R P+ + ++ E+ RQ+ ++ +++
Sbjct: 181 LFSATSGGAALREMAASVLRDPLHLQLNRVSELNEGTRQQIITAESVE 228
>gi|145493178|ref|XP_001432585.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399698|emb|CAK65188.1| unnamed protein product [Paramecium tetraurelia]
Length = 564
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 157/242 (64%), Gaps = 2/242 (0%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++ FHQ+ L++ L+KA Y +PT +QA IP+ + G+D+ + TG+GKTAAF+LPI
Sbjct: 115 DTEFHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPI 174
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
++R ++ Q ++ L+++PTREL +Q +++ +L ++ + AL +G + ++ QE+ L
Sbjct: 175 MQRF-GNLKNLQYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETEL 233
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK PDI+IATPGR +D L N+ S + +IE+LV DEADR+++ F ++++I++ S+ R
Sbjct: 234 RKYPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRLMEMGFEKEIRQILQATSKDR 293
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVLG 328
QT+L SAT+ V L ++L P++V VD +A L+Q + SN D R ++
Sbjct: 294 QTVLISATLNATVKQLSLLALNNPIKVNVDFVGGLAYGLKQYLLRIRSNQDSDREATLIT 353
Query: 329 LM 330
L+
Sbjct: 354 LL 355
>gi|429220230|ref|YP_007181874.1| DNA/RNA helicase [Deinococcus peraridilitoris DSM 19664]
gi|429131093|gb|AFZ68108.1| DNA/RNA helicase, superfamily II [Deinococcus peraridilitoris DSM
19664]
Length = 477
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 131/219 (59%), Gaps = 3/219 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++L L +A+G L Y PTPIQA +P AL GRD+ G A TG+GKTAAF+LPIL+
Sbjct: 8 AFSALDLHASLQRAVGELGYAKPTPIQALALPPALQGRDVLGAAQTGSGKTAAFLLPILQ 67
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL PR TR LVL PTREL Q+ + LA+FT V VA GG+ +K QE R
Sbjct: 68 RLQGLPRG--KTRALVLAPTRELAAQIEESALALAKFTDVRVASVFGGVSMKPQEKAFRG 125
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGRLLDH + P L +EVLVLDEADRMLD F ++ ++R RQT
Sbjct: 126 GTDLIIATPGRLLDHFQH-PYARLEALEVLVLDEADRMLDMGFLPDIRRVLRHLPARRQT 184
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ FSATM + L L PV V + A + Q
Sbjct: 185 LFFSATMPAPILQLSRELLRDPVMVGAERKAAPAQGVTQ 223
>gi|386021403|ref|YP_005939427.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 4166]
gi|327481375|gb|AEA84685.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri DSM 4166]
Length = 443
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 145/223 (65%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRL++HL N + L D+EVLV+DEADRMLD FA M+ ++ C + +QT+
Sbjct: 122 PDVLIGTPGRLIEHL-NAGNLILKDVEVLVIDEADRMLDMGFAEDMQRLVGECEKRQQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A + ++V+ L P+ + ++ E+ + RQ+ ++
Sbjct: 181 LFSATSGGAGLREMVAKVLNDPLHLQLNRVSELNESTRQQIIT 223
>gi|339494741|ref|YP_004715034.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338802113|gb|AEJ05945.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 443
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 2/227 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRL++HL N S L D+E+LV+DEADRMLD FA M+ ++ C + +QT+
Sbjct: 122 PDVLIGTPGRLIEHL-NAGSLILKDVEILVIDEADRMLDMGFAEDMQRLVGECEKRQQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
LFSAT A + ++V+ L P+ + ++ E+ RQ+ ++ ++
Sbjct: 181 LFSATSGGAGLREMVAKVLRDPLHLQLNRVSELNEATRQQVITADDV 227
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 136/227 (59%), Gaps = 5/227 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ SF +NL LL +I +L + PT IQAA+IP AL GRD+ G A TG+GKT +F +PI
Sbjct: 38 SKSFSSLNLHPSLLSSIASLQWTNPTQIQAASIPPALEGRDVIGLAETGSGKTGSFAIPI 97
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L LL KP+ + ++L PTREL Q+++V L + VGG+++ Q L
Sbjct: 98 LNYLLEKPQ--KQVFAVILAPTRELAFQIHEVMVALGRGMGANSVCVVGGVDMASQAIAL 155
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL---CS 266
+ P +V+ATPGRLLDHL NT F L I+ LV+DEADRML F ++ EI+ + C
Sbjct: 156 ARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVMDEADRMLSMDFEKEINEILEVIPDCE 215
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R+TMLFSATMT V L SL PVRV V + L Q ++
Sbjct: 216 KGRRTMLFSATMTSKVEKLQRASLVDPVRVEVSTKFQTPKKLLQNYL 262
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 156/278 (56%), Gaps = 12/278 (4%)
Query: 66 VEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
+EAE E + G E EEN +F + + L +A L + PT IQ IPVA
Sbjct: 9 MEAEAAEGSVGA--IIETEDKSEENVTFKSLGVVDVLCEACEQLKWKSPTKIQKEAIPVA 66
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L GRD+ G A TG+GKTA+F LPIL+ LL P Q LVL PTREL Q+ + L
Sbjct: 67 LQGRDVIGLAETGSGKTASFALPILQALLENP---QRLFALVLTPTRELAFQISEQFEAL 123
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
V+ A+ VGG+++ Q +L K P ++IATPGRL+DHL NT FSL ++ LV+DE
Sbjct: 124 GASIGVKSAVIVGGIDMMTQALLLAKKPHVIIATPGRLVDHLENTKGFSLKSLKYLVMDE 183
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADR+L+ F ++ +I+R+ R R+T L+SATMT V L SL PV+V V + ++
Sbjct: 184 ADRILNMDFEEEVDKILRVIPRERRTYLYSATMTKKVQKLQRASLRDPVKVEVSSKYQTV 243
Query: 306 LNLRQEFV----SFSNIDEVRLYNVLG---LMLLRENC 336
L Q ++ F ++ V L N L M+ C
Sbjct: 244 EKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTC 281
>gi|395798906|ref|ZP_10478189.1| DEAD/DEAH box helicase [Pseudomonas sp. Ag1]
gi|421139467|ref|ZP_15599506.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens BBc6R8]
gi|395337140|gb|EJF68998.1| DEAD/DEAH box helicase [Pseudomonas sp. Ag1]
gi|404509383|gb|EKA23314.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens BBc6R8]
Length = 448
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 152/237 (64%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ +++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVQECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + ++V+ L P + V+N ++ RQ+ ++ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLREMVAKVLNNPEHLQVNNVSDLNSTTRQQIITADHNVHKEQILNWL 237
>gi|258563612|ref|XP_002582551.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
gi|237908058|gb|EEP82459.1| ATP-dependent rRNA helicase RRP3 [Uncinocarpus reesii 1704]
Length = 472
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 141/223 (63%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A +L Y PT IQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 47 SFKDLGVIDSLCEACESLGYKAPTQIQAESIPLALQGRDVIGLAETGSGKTAAFALPILQ 106
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ LVL PTREL Q+ + L SV A+ VGG+++ Q L K
Sbjct: 107 ALMDKP---QSMFGLVLAPTRELAYQISEQVEALGSLISVRCAVIVGGMDMVSQAIALGK 163
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ + R+T
Sbjct: 164 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKVLPKERRT 223
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV + +N ++ L Q ++
Sbjct: 224 YLFSATMSSKVESLQRASLSNPLRVSISSNKYQTVATLLQNYL 266
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 153/271 (56%), Gaps = 3/271 (1%)
Query: 47 KLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAI 106
K + +K +K K+ K V + E E E +D ++ +F ++NL L++AI
Sbjct: 20 KSLAEKIKKNALKQKKQAPVTEKPEEIVETTSEASQDVNSEQQFHTFSELNLVPELMEAI 79
Query: 107 GALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVL 166
L Y PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL+ L R L
Sbjct: 80 EKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQRP---YYAL 136
Query: 167 VLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDH 226
VL PTREL Q+ + L V VGG+++ Q L + P I++ATPGR++DH
Sbjct: 137 VLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDH 196
Query: 227 LHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLV 286
L NT FSL ++ LV+DEADR+LD F + +I+++ R T LFSATMT+ + L
Sbjct: 197 LENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPTKRTTYLFSATMTNKIAKLQ 256
Query: 287 SVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
SL PV+V V N ++ A NL Q + S+
Sbjct: 257 RASLHEPVKVAVSNKYQTADNLVQSMMLVSD 287
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 159/295 (53%), Gaps = 14/295 (4%)
Query: 48 LIGKKKQKRLAKEGKLKQVEAEEYEENEGGK----EFFEDAPPV--EENSSFHQMNLSRP 101
L K K K L + K Q EA E++E K + E+ P E+ SF+ +NL
Sbjct: 23 LAAKIKAKALENQEKQTQKEASGEEKDESKKHKKAKVQEEEPEYQGEDLQSFNDLNLVPE 82
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L++A LN+ PTPIQA IP AL GRDI G A TG+GKTAAF +PIL RL D Q
Sbjct: 83 LIEACKNLNFDKPTPIQARAIPPALEGRDIIGLAQTGSGKTAAFAIPILNRLW---EDKQ 139
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
VL PTREL Q + L V VGG+ + Q L + P I+IATPG
Sbjct: 140 PYYACVLAPTRELAQQTKETFDSLGALMGVRSTCIVGGMNMMDQARELMRKPHIIIATPG 199
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQTMLFSATMTD 280
RL+DHL NT FSL + LV+DEADR+LD F + +I+++ ++ R T LFSATMT
Sbjct: 200 RLMDHLENTKGFSLRKLRFLVMDEADRLLDMEFGPVLDKILKVIPTQDRTTYLFSATMTS 259
Query: 281 AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLMLLREN 335
++ L SLT PV+ V N ++ L Q + + L N + LL EN
Sbjct: 260 KIDKLQRASLTEPVKCAVSNKYQTVDTLVQTLMVVPS----GLKNTYLIYLLNEN 310
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 145/245 (59%), Gaps = 7/245 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E+ +F ++ + L +A L + +P+ IQ IPVAL G+DI G A TG+GKT AF L
Sbjct: 34 EDTGTFQELGVVDVLCEACAELKWKHPSKIQKEAIPVALQGKDIIGLAETGSGKTGAFAL 93
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 94 PILQALLENP---QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQAL 150
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+ R
Sbjct: 151 ILSKKPHIIIATPGRLVDHLENTKGFNLKALKYLVMDEADRILNMDFEVEVDKILRVIPR 210
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRL 323
R+T LFSATMT V L SL PV+V V ++ L+Q + V F ++ V +
Sbjct: 211 ERRTYLFSATMTKKVQKLQRASLQDPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHI 270
Query: 324 YNVLG 328
N L
Sbjct: 271 LNELA 275
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 140/229 (61%), Gaps = 4/229 (1%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P + SF ++ L L +A ++ Y PT IQA IP+AL GRD+ G A TG+GKTAAF
Sbjct: 47 PKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAF 106
Query: 146 MLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
LPIL+ L+ KP + LVL PTREL Q+ Q L SV + VGG+++ Q
Sbjct: 107 ALPILQALMDKP---SSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQ 163
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
L K P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++
Sbjct: 164 SIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVL 223
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH-EVALNLRQEFV 313
R R+T LFSATM+ V L SL P+RV V ++ + L+Q ++
Sbjct: 224 PRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQSYI 272
>gi|28868793|ref|NP_791412.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969602|ref|ZP_03397738.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
T1]
gi|28852032|gb|AAO55107.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213925698|gb|EEB59257.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
T1]
Length = 453
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 153/250 (61%), Gaps = 8/250 (3%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FF + PV F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+
Sbjct: 2 FFVEVTPV-----FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGS 56
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF+LPIL RL+ + + R ++L+PTREL Q + + +QFT V+ L GG
Sbjct: 57 GKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGG 116
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+ KVQ ++LRK PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++
Sbjct: 117 EDFKVQAAMLRKVPDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVE 175
Query: 260 EIIRLCSRTRQTMLFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SN 317
+ C+ QTMLFSAT A + +++ L P + V++ E+A R + ++ N
Sbjct: 176 RLAGECAGREQTMLFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHN 235
Query: 318 IDEVRLYNVL 327
+ + ++ N L
Sbjct: 236 VHKEQVLNWL 245
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 143/259 (55%), Gaps = 13/259 (5%)
Query: 52 KKQKRLAKEGKLKQVEAEEYE---------ENEGGKEFFEDAPPVEENSSFHQMNLSRPL 102
K+QK K +K+ E E E E E DA E SF + + L
Sbjct: 5 KRQKVSHKASTVKESRVAERESSPAQSAVSEPEAEGEVTADAAE-EVTKSFKDLGVVDSL 63
Query: 103 LKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN 162
A L Y PTPIQA +IP AL RDI G A TG+GKTAAF LP+++ LL KP Q
Sbjct: 64 CDACANLGYTKPTPIQAQSIPHALANRDIIGLAETGSGKTAAFALPVIQALLEKP---QA 120
Query: 163 TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGR 222
LVL PTREL Q+ Q L S+ A+ VGGL++ Q L K P ++IATPGR
Sbjct: 121 FFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVAQAIALGKKPHVIIATPGR 180
Query: 223 LLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAV 282
L+DHL T FSL ++ LV+DEADR+LD F + +I++ R R+T LFSATM+ +
Sbjct: 181 LVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFVPRERRTFLFSATMSSKI 240
Query: 283 NDLVSVSLTRPVRVFVDNN 301
L SL PVRV + +N
Sbjct: 241 ESLQRASLRDPVRVSISSN 259
>gi|452977644|gb|EME77410.1| hypothetical protein MYCFIDRAFT_83332 [Pseudocercospora fijiensis
CIRAD86]
Length = 498
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 161/279 (57%), Gaps = 11/279 (3%)
Query: 43 KNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPV-------EENSSFHQ 95
K + + ++K+ R++ E K+ +E +++E + E A +F
Sbjct: 19 KKAKHTVSEEKEHRVSPEHPRKRAASEISDDDEVPERDVESAAASTVKDGDEAAEKTFAD 78
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
+ + L A +LN+ PT IQ IP+AL G+DI G A TG+GKTAAF LPIL+ LL
Sbjct: 79 LGVREELCDACDSLNFKRPTAIQREAIPIALEGKDIIGLAETGSGKTAAFALPILQALLD 138
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
KP Q L+L PTREL Q+ Q L SV A+ VGG+++ Q L K P I
Sbjct: 139 KP---QPLFGLILAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVPQAVALAKKPHI 195
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
V+ATPGRLLDH+ NT FS+ + LV+DEADR+LD F + +I++ +R R+TMLFS
Sbjct: 196 VVATPGRLLDHMENTKGFSVKHFKYLVMDEADRLLDLDFGPILDKILQELNRDRRTMLFS 255
Query: 276 ATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV 313
ATM+ +N L +L PVRV + +++++ NL Q ++
Sbjct: 256 ATMSTKLNSLTRAALQNPVRVSISESSYQTVKNLMQRYM 294
>gi|443472863|ref|ZP_21062888.1| ATP-dependent RNA helicase SrmB [Pseudomonas pseudoalcaligenes
KF707]
gi|442903426|gb|ELS28717.1| ATP-dependent RNA helicase SrmB [Pseudomonas pseudoalcaligenes
KF707]
Length = 442
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 147/223 (65%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPLLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + R L+L+PTREL Q + + +QFT ++ + GG + KVQ ++LRK
Sbjct: 62 LIGEAKPRERIRSLILLPTRELAQQTLKEVERFSQFTFIKSGIVTGGEDFKVQAAMLRKL 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++++TPGRL++HL N + L ++EVLVLDEADRMLD FA M+ I LC+ +QT+
Sbjct: 122 PDVLVSTPGRLIEHL-NAGTVDLREVEVLVLDEADRMLDMGFAEDMQRITELCANRQQTL 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT +A+ ++ + L P+ + +++ ++ RQ+ ++
Sbjct: 181 LFSATTGGNALREVSNQVLRDPLHLRLNSIDQLNEGTRQQIIT 223
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A + Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 53 SFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 112
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ P Q+ L+L PTREL Q+ + L +V A+ VGG+++ Q L K
Sbjct: 113 ALMENP---QSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGK 169
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 170 KPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRT 229
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV V +N ++ L Q ++
Sbjct: 230 FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYL 272
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 141/225 (62%), Gaps = 5/225 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F ++ + L +A +L Y PTPIQA IP+AL GRD+ G A TG+GKTAAF+LPIL
Sbjct: 51 TTFKELGIIDSLCEACESLGYKAPTPIQAEAIPLALQGRDLIGLAETGSGKTAAFVLPIL 110
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+ L+ KP Q L+L PTREL Q+ + L +V A+ VGG+++ Q L
Sbjct: 111 QALMDKP---QQLHSLILAPTRELAYQISEAVEALGSLIAVRCAVLVGGMDMITQAIALG 167
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR-TR 269
K P +++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R
Sbjct: 168 KKPHVIVATPGRLLDHLENTKGFSLRQLKYLVMDEADRLLDLDFGPILDKILKILPREGR 227
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVD-NNHEVALNLRQEFV 313
+T LFSATM+ V L SL+ P+RV V + ++ L Q ++
Sbjct: 228 KTYLFSATMSSKVESLQRASLSNPLRVAVSQDKYQTVSTLIQSYL 272
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 149/239 (62%), Gaps = 8/239 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ + L A +L Y PT IQ +IP+AL G+D+ G A TG+GKTAAF LPIL+
Sbjct: 89 TFAELGVREELCDACISLGYKTPTAIQRESIPIALQGKDVIGLAETGSGKTAAFALPILQ 148
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL K + LVL PTREL Q+ Q L +V+ A+ VGG+++ Q+ L K
Sbjct: 149 ALLEK---QDHYFGLVLAPTRELAYQISQQFEALGSLINVKCAVIVGGMDMTPQQIALAK 205
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 206 KPHIIVATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDLDFGPILDKILQVLPRERRT 265
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV----SFSNIDEVRLYN 325
MLFSATM+ +++L +L PVRV + ++++ NL+Q ++ F +I V L N
Sbjct: 266 MLFSATMSTKLDNLTRAALQSPVRVSISSSSYQTVKNLKQSYIFIPHKFKDIYLVYLVN 324
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q+ + L +A +LNY +PTPIQ +IPVAL RDI G A TG+GKTAAF LPIL+
Sbjct: 58 TFKQLGIVDSLCEACESLNYKFPTPIQEKSIPVALQNRDIIGLAETGSGKTAAFALPILQ 117
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q L K
Sbjct: 118 ALLDKP---QPLFGLVLAPTRELAHQIGQSFEALGSSISLRCAVIVGGLDMVPQAVALGK 174
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL T FSL ++ LV+DEADR+LD F + ++++ R R+T
Sbjct: 175 KPHIIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPAIDKLLKFIPRERRT 234
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
LFSAT++ V L SL PVRV V +N
Sbjct: 235 YLFSATLSSKVESLQRASLRDPVRVSVSSN 264
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF + ++ L A L Y PTPIQA +IP AL RDI G A TG+GKTAAF L
Sbjct: 49 EVTKSFKDLGVADSLCDACANLGYTKPTPIQAQSIPHALANRDIIGLAETGSGKTAAFAL 108
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+++ LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q
Sbjct: 109 PVIQALLEKP---QAFFGLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVAQAI 165
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +++ATPGRL+DHL T FSL ++ LV+DEADR+LD F + +I++ R
Sbjct: 166 ALGKKPHVIVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPR 225
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
R+T LFSATM+ + L SL PVRV + +N
Sbjct: 226 ERRTFLFSATMSSKIESLQRASLRDPVRVSISSN 259
>gi|408480568|ref|ZP_11186787.1| ATP-dependent RNA helicase [Pseudomonas sp. R81]
Length = 448
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 151/237 (63%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPVLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ + GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVSECVNRQQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT + + ++V+ L P + V+N ++ RQ+ V+ N+ + ++ N L
Sbjct: 181 LFSATTGGSTLREMVAKVLNNPEHLQVNNVSDLNATTRQQIVTADHNVHKEQILNWL 237
>gi|421616760|ref|ZP_16057762.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
gi|421617248|ref|ZP_16058242.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
gi|409780746|gb|EKN60363.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
gi|409781241|gb|EKN60843.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri KOS6]
Length = 443
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRL++HL N S L D+E+L++DEADRMLD FA M+ ++ C + +QT+
Sbjct: 122 PDVLIGTPGRLIEHL-NAGSLILKDVEILIIDEADRMLDMGFAEDMQRLVGECEKRQQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A + ++V L P+ + ++ E+ RQ+ ++
Sbjct: 181 LFSATSGGAGLREMVGKVLRDPLHLQLNRVSELNEATRQQIIT 223
>gi|339488772|ref|YP_004703300.1| DEAD/DEAH box helicase [Pseudomonas putida S16]
gi|338839615|gb|AEJ14420.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida S16]
Length = 440
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ LN++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELNFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ R L+L+PTREL Q + + +QFT ++ L GG + K Q ++LRK
Sbjct: 62 LVDLRERRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C +QT+
Sbjct: 122 PDVLIGTPGRLLEQL-NAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENRQQTL 180
Query: 273 LFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 181 LFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 223
>gi|58271466|ref|XP_572889.1| ATP-dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115044|ref|XP_773820.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819312|sp|P0CR01.1|RRP3_CRYNB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|338819313|sp|P0CR00.1|RRP3_CRYNJ RecName: Full=ATP-dependent rRNA helicase RRP3
gi|50256448|gb|EAL19173.1| hypothetical protein CNBH2720 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229148|gb|AAW45582.1| ATP-dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 484
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 132/221 (59%), Gaps = 3/221 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP N +F + +S L +A ++ + P+ IQA IP AL G+DI G A TG+GKT
Sbjct: 30 DAPEASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKT 89
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL+ L P Q LVL PTREL Q+ Q L V A+ VGG+++
Sbjct: 90 AAFSLPILQTLWENP---QPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDM 146
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P I++ATPGRL+DHL NT FSL ++ LV+DEADR+LD F + +I+
Sbjct: 147 MSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKIL 206
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
++ + R T LFSATMT V L SL +PVRV V + +
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYS 247
>gi|431803785|ref|YP_007230688.1| DEAD/DEAH box helicase [Pseudomonas putida HB3267]
gi|430794550|gb|AGA74745.1| DEAD/DEAH box helicase [Pseudomonas putida HB3267]
Length = 440
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ LN++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELNFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ R L+L+PTREL Q + + +QFT ++ L GG + K Q ++LRK
Sbjct: 62 LVDLRERRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C +QT+
Sbjct: 122 PDVLIGTPGRLLEQL-NAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENRQQTL 180
Query: 273 LFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 181 LFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 223
>gi|429329858|gb|AFZ81617.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 562
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 154/253 (60%), Gaps = 14/253 (5%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N ++ + R +L AI L + PT IQ+ IP+AL G+DI A TG+GKTAAF++P+
Sbjct: 69 NENWSDFRICRSILLAISDLEFTRPTIIQSRVIPIALEGKDILATAETGSGKTAAFIIPM 128
Query: 150 LERLL-------------YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
L+RL+ ++ T+ LVL+PTREL Q Y V + L +F ++ L
Sbjct: 129 LQRLVLSNVLTPKNGKFGFRNSTKDVTKALVLLPTRELAAQCYDVLKALTRFLNINDILL 188
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG+ +K QE+ L + P+++I+TPGR LD L N+ L +E+++LDEADR+L+ F
Sbjct: 189 TGGIPIKEQETKLSRIPNVIISTPGRALDILLNSGRIHLDSVEIVILDEADRLLEMGFRD 248
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
+ I++ C++ RQTMLFSAT+T+ DLV++SL P+ + ++ + +V+ L E +
Sbjct: 249 ECVNILKFCNKNRQTMLFSATLTEETKDLVNLSLVNPIYIKMEESTKVSKTLNFEAIMIP 308
Query: 317 NIDEVRLYNVLGL 329
+ DE+R VL L
Sbjct: 309 S-DELREACVLYL 320
>gi|153006338|ref|YP_001380663.1| DEAD/DEAH box helicase [Anaeromyxobacter sp. Fw109-5]
gi|152029911|gb|ABS27679.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter sp.
Fw109-5]
Length = 455
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+SF +++LS L A+ + +PTPIQA IP AL G+D+ G AATGTGKTAAF+LP+
Sbjct: 3 TTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPL 62
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
++RL KP TR LVL PTREL +Q+ + + V A+ +GG+ + Q L
Sbjct: 63 IDRLAGKP----GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEAL 118
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
R+ +IVIATPGRL+DHL + L IE LVLDEADRMLD F Q+ I+R + R
Sbjct: 119 RQKREIVIATPGRLVDHLEQG-NARLDGIEALVLDEADRMLDMGFKPQLDRILRRLPKQR 177
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
QT+LFSATM V D L PVRV V + A Q+
Sbjct: 178 QTLLFSATMAGEVADFARAHLRDPVRVEVARSGTTAARAEQQ 219
>gi|148546618|ref|YP_001266720.1| DEAD/DEAH box helicase [Pseudomonas putida F1]
gi|395447873|ref|YP_006388126.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida ND6]
gi|148510676|gb|ABQ77536.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida F1]
gi|388561870|gb|AFK71011.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida ND6]
Length = 453
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 145/230 (63%), Gaps = 6/230 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E S F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+L
Sbjct: 10 EVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVL 69
Query: 148 PILERL--LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
P+L RL L PR + R L+L+PTREL Q + + +QFT ++ L GG + K Q
Sbjct: 70 PLLNRLVDLSGPRVE--IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQ 127
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
++LRK PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C
Sbjct: 128 AAMLRKVPDVLIGTPGRLLEQL-NAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKEC 186
Query: 266 SRTRQTMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
QT+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 187 ENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 236
>gi|94498979|ref|ZP_01305517.1| DEAD/DEAH box helicase-like protein [Bermanella marisrubri]
gi|94428611|gb|EAT13583.1| DEAD/DEAH box helicase-like protein [Oceanobacter sp. RED65]
Length = 457
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 6/246 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L+ P++KAI Y PTPIQA IP L GRD+ A TGTGKTA F LPIL++
Sbjct: 3 FTDLALAEPIVKAIAEQGYTSPTPIQAQGIPAVLSGRDLLAAAQTGTGKTAGFTLPILQK 62
Query: 153 LLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
LL P+ RVLVL PTREL QV +++T + + GG+++ Q LR
Sbjct: 63 LLDAPKGVKPNQARVLVLTPTRELAAQVQDNVATYSKYTKIRSEVVFGGVKINPQMQRLR 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRLLD LHN + ++ L+LDEADRMLD F + +++I+RL + RQ
Sbjct: 123 RGVDILVATPGRLLD-LHNQNAIHFDQLDTLILDEADRMLDMGFINDIRKIMRLLPKKRQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
++FSAT +D + L + PV V V + A +RQ ++ +D+ + N+L +
Sbjct: 182 NLMFSATFSDKIRALAKTIVENPVEVSVTPKNTTAKKVRQSIIA---VDKKQKINLLIDL 238
Query: 331 LLRENC 336
L +E
Sbjct: 239 LAKEKW 244
>gi|321262460|ref|XP_003195949.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317462423|gb|ADV24162.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 484
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 132/221 (59%), Gaps = 3/221 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP N SF + +S L +A ++ + P+ IQA IP AL G+DI G A TG+GKT
Sbjct: 30 DAPEASHNKSFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKT 89
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL+ L P Q LVL PTREL Q+ Q L V A+ VGG+++
Sbjct: 90 AAFSLPILQTLWENP---QPFFALVLAPTRELAYQISQQITSLGSGIGVRTAVLVGGMDM 146
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P +++ATPGRL+DHL NT FSL ++ LV+DEADR+LD F + +++
Sbjct: 147 MSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKVL 206
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
++ + R T LFSATMT V L SL +PVRV V + +
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYS 247
>gi|392420851|ref|YP_006457455.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri CCUG 29243]
gi|452750382|ref|ZP_21950132.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri NF13]
gi|390983039|gb|AFM33032.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri CCUG 29243]
gi|452005755|gb|EMD98037.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri NF13]
Length = 443
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 146/228 (64%), Gaps = 2/228 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + R L+L+PTREL Q + + +QFT ++ A+ GG + KVQ +V+RK
Sbjct: 62 LIGDAVVRTDVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAVMRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++HL N + L D+E+L+LDEADRMLD FA ++ ++ C++ +QT+
Sbjct: 122 PDILIGTPGRMIEHL-NAGTLVLKDVEMLILDEADRMLDMGFAEDVQRLVGECAKRQQTL 180
Query: 273 LFSATMTDAVNDLVSVSLTR-PVRVFVDNNHEVALNLRQEFVSFSNID 319
LFSAT A ++ S+ R P+ + ++ E+ RQ+ ++ N +
Sbjct: 181 LFSATSGGAALREMTASVLRDPLHLQLNRVSELNEGTRQQIITAENTE 228
>gi|431926773|ref|YP_007239807.1| DNA/RNA helicase [Pseudomonas stutzeri RCH2]
gi|431825060|gb|AGA86177.1| DNA/RNA helicase, superfamily II [Pseudomonas stutzeri RCH2]
Length = 443
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 145/223 (65%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + R L+L+PTREL Q + + +QFT ++ A+ GG + KVQ +VLRK
Sbjct: 62 LIGDAVVRTDVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAVLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++HL N + L D+E+L+LDEADRMLD FA ++ ++ C++ +QT+
Sbjct: 122 PDILIGTPGRMIEHL-NAGTLILKDVEMLILDEADRMLDMGFAEDVQRLVGECAKRQQTL 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A+ ++ + L P+ + ++ E++ RQ+ ++
Sbjct: 181 LFSATSGGSALREMTASVLRDPLHLQLNRISELSEGTRQQIIT 223
>gi|209882552|ref|XP_002142712.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209558318|gb|EEA08363.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 555
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 135/218 (61%), Gaps = 14/218 (6%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
+ + LSRP+LKA+ LN++ PTPIQ IP+AL GRDI A TG+GKTAAF+LP +ER
Sbjct: 3 WSSLELSRPILKALNDLNFVNPTPIQKEVIPLALAGRDILAEAETGSGKTAAFLLPTIER 62
Query: 153 LL------------YKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEV-ALSVG 198
LL P N T+VL+L+P+REL +Q + V L ++ + + G
Sbjct: 63 LLKFPGIRARKMSPLGPTGGLNATKVLILLPSRELAMQCFDVLESLIKYCLIITRCIVTG 122
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+ E LR PDIVIATPGR+LD L NT L +E+++LDEADR+LD F +
Sbjct: 123 GMSQSQHEVTLRSQPDIVIATPGRILDMLINTMGVHLELLEIVILDEADRLLDMGFRREC 182
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
EI+R S+ RQTMLFSAT++ V DL ++L P R+
Sbjct: 183 LEILRYVSQCRQTMLFSATLSRGVTDLALLTLRNPCRI 220
>gi|294911908|ref|XP_002778095.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239886216|gb|EER09890.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 135/226 (59%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E +F + + L KA L + +P+ IQ TIP AL GRD+ A TG+GKT AF +
Sbjct: 26 EHAVTFESLGVCPELCKACDVLQWEHPSKIQEETIPYALQGRDLIALAETGSGKTGAFAI 85
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PI+++LL ++T VL PTREL VQ+ Q L ++ A VGGL++ Q
Sbjct: 86 PIIQKLLDAAPHRKSTWACVLAPTRELCVQIGQQFEGLGASINLTTATIVGGLDMVTQAM 145
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I++A+PGRL+DHL NT F L I+ LV+DEADR+L F + +I++ C R
Sbjct: 146 ALSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPR 205
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQT LFSATMT+ V+ L SLTRPV+ V +VA L Q ++
Sbjct: 206 DRQTFLFSATMTNKVSQLQRASLTRPVKCEVARKFDVAKGLVQNYM 251
>gi|325273395|ref|ZP_08139652.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
TJI-51]
gi|324101468|gb|EGB99057.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
TJI-51]
Length = 426
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 142/228 (62%), Gaps = 2/228 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E S F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+L
Sbjct: 10 EVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVL 69
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L RL+ R L+L+PTREL Q + + +QFT ++ L GG + K Q +
Sbjct: 70 PLLNRLVDLKGGRVEIRSLILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAA 129
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+LRK PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C
Sbjct: 130 MLRKVPDVLIGTPGRLLEQL-NAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECEN 188
Query: 268 TRQTMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
QT+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 189 REQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 236
>gi|167035034|ref|YP_001670265.1| DEAD/DEAH box helicase [Pseudomonas putida GB-1]
gi|166861522|gb|ABY99929.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida GB-1]
Length = 453
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 142/228 (62%), Gaps = 2/228 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E S F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+L
Sbjct: 10 EVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVL 69
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L RL+ R L+L+PTREL Q + + +QFT V+ L GG + K Q +
Sbjct: 70 PLLNRLVDLKGGRVEIRSLILLPTRELAQQTLKQVQLFSQFTYVKAGLVTGGEDFKEQAA 129
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+LRK PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C
Sbjct: 130 MLRKVPDVLIGTPGRLLEQL-NAGNLDLSHVKVLILDEADRMLDMGFAEDMERLCKECEN 188
Query: 268 TRQTMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
QT+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 189 REQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 236
>gi|226228176|ref|YP_002762282.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
gi|226091367|dbj|BAH39812.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
Length = 374
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 134/217 (61%), Gaps = 4/217 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L+RPLL A+ Y PTPIQ IP+ALLGRD+ G A TGTGKTA+F LP++
Sbjct: 2 TFADLGLARPLLDALHDAGYERPTPIQREAIPLALLGRDLIGLAQTGTGKTASFTLPVVH 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLL PR TRVLVL PTREL +QV + R+ + + V+V GG+ + QE LR+
Sbjct: 62 RLLGGPR---RTRVLVLTPTRELCLQVEESVRKYSSRSPVDVIPVYGGVGYEPQEKALRR 118
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D+V+ATPGRLLDHL + + +E LVLDEADRMLD FA Q+ I+ R RQT
Sbjct: 119 GVDVVVATPGRLLDHLEKR-NVDFTYLETLVLDEADRMLDMGFAPQINRIVDQIPRYRQT 177
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNL 308
+LFSATM V L L +PV V V A +
Sbjct: 178 LLFSATMPPEVEALGRKYLRKPVVVQVGRRSSAATTV 214
>gi|449547391|gb|EMD38359.1| hypothetical protein CERSUDRAFT_49063 [Ceriporiopsis subvermispora
B]
Length = 447
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L PLL+A+ L+Y PT IQA +P AL GRDI G AATG+GKTAAF LPIL++
Sbjct: 15 FRSLGLIEPLLEAVDQLHYTTPTEIQAEVLPHALQGRDIIGVAATGSGKTAAFALPILQK 74
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L +P+ V+ PTREL Q+ Q L V A VGG+ + Q L K
Sbjct: 75 LWEEPK---GLFACVMAPTRELAYQISQQFESLGSAIGVRCATIVGGMPIMDQAVALAKR 131
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P IV+ATPGRL DHL NT FSL ++ LV+DEADR+LD F + +I+++ + R T
Sbjct: 132 PHIVVATPGRLNDHLENTKGFSLRGLKFLVMDEADRLLDMDFGPIIDKILKVIPKERTTY 191
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L SL+ PVRV V + L Q ++
Sbjct: 192 LFSATMTTKVAKLQRASLSNPVRVEVSEKYSTVSTLLQYYL 232
>gi|407365774|ref|ZP_11112306.1| DEAD/DEAH box helicase [Pseudomonas mandelii JR-1]
Length = 448
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVEECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L + ++N ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNAEHLQLNNVSDLNATTRQQIIT 223
>gi|418294272|ref|ZP_12906168.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379065651|gb|EHY78394.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 443
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 146/229 (63%), Gaps = 2/229 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + R L+L+PTREL Q + + +QFT ++ A+ GG + KVQ +++RK
Sbjct: 62 LIGDAVVRTDVRALILLPTRELAQQTLKEVERFSQFTFIKSAMITGGEDFKVQAAIMRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++HL N + L D+E+L+LDEADRMLD FA ++ ++ C++ +QT+
Sbjct: 122 PDILIGTPGRMIEHL-NAGTLILKDVELLILDEADRMLDMGFADDVQRLVNECAKRQQTL 180
Query: 273 LFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
LFSAT A+ ++ + L P+ + ++ E+ RQ+ ++ N +
Sbjct: 181 LFSATSGGTALREMTASVLRDPLHLQLNRVSELNEGTRQQIITAENTEH 229
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 146/251 (58%), Gaps = 13/251 (5%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
EA E ++G K F SF ++ L LL+AI ++ + PTPIQA IP AL
Sbjct: 51 EASEVSVSDGSKRF----------ESFTELKLIPELLEAIQSMKFTKPTPIQAEAIPHAL 100
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
G+D+ G A TG+GKTAAF +PIL+ L + D LVL PTREL Q+ L
Sbjct: 101 EGKDVIGLAVTGSGKTAAFAIPILQSLWH---DQLPYYCLVLSPTRELAYQIKDTFDALG 157
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
+ VGG+++ Q L + P +++ATPGR++DHL +T FSL +++ LV+DEA
Sbjct: 158 SGMGLRACCIVGGMDMMDQARDLMRKPHVIVATPGRIVDHLEHTKGFSLKNLKYLVMDEA 217
Query: 247 DRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
DR+LD F ++ +I+R+ R R T LFSATMT+ + L SL PVR+ V + ++ A
Sbjct: 218 DRLLDLDFGPELDKILRVIPRERNTYLFSATMTNKIEKLQRASLNNPVRIAVSSKYQTAD 277
Query: 307 NLRQEFVSFSN 317
NL Q + S+
Sbjct: 278 NLVQSMMLVSD 288
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 147/262 (56%), Gaps = 10/262 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
E+ P E+ ++ + LS L KA L + P+ IQ IPVAL G+D+ G A TG+GK
Sbjct: 48 EETPKAEQPLTWKDLGLSETLCKACDELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGK 107
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG++
Sbjct: 108 TGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVIVGGMD 164
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I
Sbjct: 165 MVAQGLQLAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKI 224
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+++ R R+T LFSATMT V L SL PV+V V N ++ L+Q + V + +
Sbjct: 225 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVDQLQQYYLFIPVKYKD 284
Query: 318 IDEVRLYNVLG---LMLLRENC 336
+ V + N L M+ C
Sbjct: 285 VYLVHILNELAGNSFMIFCSTC 306
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 155/272 (56%), Gaps = 11/272 (4%)
Query: 51 KKKQKRLAKEGKLKQVEAEEYEE---NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIG 107
K ++K+L+ + K + E + + G K+ DA P +F + + L +A
Sbjct: 31 KTEEKQLSSQPKQPPAPSSEADSETIDNGSKQGNNDAAP----KTFADLGIVESLCEACE 86
Query: 108 ALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLV 167
L Y PTPIQ IP+AL RD+ G A TG+GKTAAF LPIL+ LL KP Q LV
Sbjct: 87 RLGYKRPTPIQEQAIPLALQNRDLIGIAETGSGKTAAFALPILQALLDKP---QPLFALV 143
Query: 168 LVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHL 227
L PTREL Q+ Q L S+ AL +GGL++ Q L K P +++ATPGRLLDHL
Sbjct: 144 LAPTRELAAQIAQAFEALGSMISLRCALILGGLDMVQQAIALGKKPHVIVATPGRLLDHL 203
Query: 228 HNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVS 287
T FSL +++ LV+DEADR+LD F +++I++ R R+T LFSATM+ V L
Sbjct: 204 EKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSKVESLQR 263
Query: 288 VSLTRPVRVFVDNN-HEVALNLRQEFVSFSNI 318
SL P++V + + ++ L Q ++ +I
Sbjct: 264 ASLRDPLKVSISTSKYQTVSTLVQHYIFIPHI 295
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A L Y PTPIQ +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 57 SFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 116
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L V+ A+ VGG+++ Q L K
Sbjct: 117 SLLDKP---QPLFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAIALGK 173
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 174 KPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 233
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSAT++ V L SL P+RV + +N ++ L Q ++
Sbjct: 234 YLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYI 276
>gi|392548564|ref|ZP_10295701.1| ATP-dependent RNA helicase [Pseudoalteromonas rubra ATCC 29570]
Length = 407
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 146/245 (59%), Gaps = 6/245 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + L+ LL+ + AL++ PT IQA +IPV L G D+ CA TGTGKTAAFMLPI+
Sbjct: 2 SFESLALAPALLEGLQALDFTEPTAIQAQSIPVILAGHDLLACAQTGTGKTAAFMLPIMT 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+LL +P R L+L PTREL QV Q A ++ GG + QE LR+
Sbjct: 62 QLLIQP--GSGVRALILAPTRELAQQVAQHANTYAAHCELKTVCLHGGANIGPQEKALRE 119
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DIV+ATPGRLLDHL + +LS +E LV DEADRMLD F +++ I+R RQT
Sbjct: 120 GADIVVATPGRLLDHLIKG-TLNLSAVEYLVFDEADRMLDMGFMGEIRRIMRKMPPDRQT 178
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLML 331
+LFSAT+ +AV + V L P R+ ++ ++ A + Q F + +DE R ++ ++
Sbjct: 179 LLFSATVDEAVFNQVKDWLKEPKRIGIEAQNQAAAKVEQIFYA---VDEERKRELIAHLI 235
Query: 332 LRENC 336
++N
Sbjct: 236 GKQNW 240
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 138/230 (60%), Gaps = 8/230 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
APP +F + L PLL+A+ + Y PT IQA +P AL GRDI G A+TG+GKTA
Sbjct: 21 APP-----TFKSLGLIDPLLEALEQMKYKAPTDIQAEALPHALQGRDIIGVASTGSGKTA 75
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL++L D + V+ PTREL Q+ Q + V A +GG++++
Sbjct: 76 AFALPILQKLW---EDPKGLFACVIAPTRELAFQITQQFESIGSAMGVRCATIIGGVDIQ 132
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q+ L K P +++ATPGRLL+HL T FSL ++ LVLDEADR+LD F + +I++
Sbjct: 133 SQKIALAKKPHVIVATPGRLLEHLEETKGFSLRSLKFLVLDEADRLLDMDFGPILDKILK 192
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
L + R T LFSATMT V L SL+ PVRV V++ + L Q ++
Sbjct: 193 LIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVNSKYSTVSTLLQYYL 242
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 130/205 (63%), Gaps = 2/205 (0%)
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
L + PTPIQ A+IP+AL G+D+ G A TG+GKTAAF LPIL+ L + P +L
Sbjct: 120 LKFHKPTPIQQASIPLALAGKDLIGLAETGSGKTAAFALPILQALYHSPHS--TLFACIL 177
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
PTREL Q+ + T + V+ + VGG+++ Q L K P I++ATPGRLLDHL
Sbjct: 178 APTRELAFQISEQTEAIGGSLGVKTCVIVGGMDMMPQAIALSKRPHIIVATPGRLLDHLE 237
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
NT FSL I+ LV+DEADR+LD F +++I+++ R T LFSATMTD V L +
Sbjct: 238 NTKGFSLRSIKYLVMDEADRLLDLDFGPIIEKILKVLPPQRNTYLFSATMTDKVERLQRM 297
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFV 313
SLT PVRV V + ++ +L Q F+
Sbjct: 298 SLTNPVRVAVSSKYQTVKSLLQYFM 322
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L A L Y PTPIQ +IP+AL GRDI G A TG+GKTAAF LPIL+
Sbjct: 63 SFRDLGIVDSLCDACDRLGYKRPTPIQEQSIPLALQGRDIIGIAETGSGKTAAFALPILQ 122
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L S+ AL +GGL++ Q L K
Sbjct: 123 ALLDKP---QPLFALVLAPTRELAAQITQAFEALGSLISLRCALILGGLDMVQQAIALGK 179
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +V+ATPGRLLDHL T FSL +++ LV+DEADR+LD F +++I++ R R+T
Sbjct: 180 KPHVVVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILKFLPRERRT 239
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL P++V + ++ ++ L Q ++
Sbjct: 240 FLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVATLVQNYL 282
>gi|410076008|ref|XP_003955586.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
gi|372462169|emb|CCF56451.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
Length = 496
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 155/254 (61%), Gaps = 9/254 (3%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
+ E +E+ K+ D+ + +F ++NLS+P LKAI + + TP+QA TIP +
Sbjct: 10 QEEGADESTIQKQIVTDSTESDVVETFKELNLSQPTLKAIDKMGFTKMTPVQARTIPPLM 69
Query: 127 LGRDICGCAATGTGKTAAFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTR 183
GRD+ G A TG+GKT AF+LP +L L +KPR+ T V+V+ PTREL +Q++ V R
Sbjct: 70 AGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKPRN--GTGVIVITPTRELALQIFGVVR 127
Query: 184 QLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVL 243
+L +F S + +GG + + L K +I+IATPGRLLDHL NT F +++ LV+
Sbjct: 128 ELMEFHSQTFGIVIGGANRRQEAEKLMKGVNILIATPGRLLDHLQNTKGFVFKNLKALVI 187
Query: 244 DEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRP---VRVFVD 299
DEADR+L+ F +M++II+ L + RQ+MLFSAT T V DL +SL + + V +
Sbjct: 188 DEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLARISLRKGPLFINVVSE 247
Query: 300 NNHEVALNLRQEFV 313
+ A L Q +V
Sbjct: 248 KDSSTADGLEQGYV 261
>gi|254565179|ref|XP_002489700.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|238029496|emb|CAY67419.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|328350119|emb|CCA36519.1| ATP-dependent RNA helicase DDX18 [Komagataella pastoris CBS 7435]
Length = 546
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 155/252 (61%), Gaps = 14/252 (5%)
Query: 69 EEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLG 128
EE ++ + K++ + V EN F + LS P LKAIG + + T +QA TIP L G
Sbjct: 67 EEIDDVKSSKDY---SSTVYEN--FTDLKLSEPTLKAIGNMGFTKMTAVQARTIPPLLAG 121
Query: 129 RDICGCAATGTGKTAAFMLPILERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
RD+ G A TG+GKT AF++P +E L +KPR+ T +V+ PTREL +Q++ V R+L
Sbjct: 122 RDVLGAAKTGSGKTLAFLIPAIEMLYSLKFKPRN--GTGAIVITPTRELALQIFGVAREL 179
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
+ S + +GG + + L K +I+IATPGRLLDHL NT F +++ L++DE
Sbjct: 180 MESHSQTFGILIGGANRRAEAEKLMKGVNIIIATPGRLLDHLQNTKGFIFKNLKALIIDE 239
Query: 246 ADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTR-PVRVFVDNNHE 303
ADR+L+ F +MK+II+ L + RQTMLFSAT T V DL VSL + P+ + VD+ +E
Sbjct: 240 ADRILEIGFEDEMKQIIKILPNENRQTMLFSATQTTKVEDLARVSLRKGPLYINVDSENE 299
Query: 304 VAL--NLRQEFV 313
+ L Q +V
Sbjct: 300 TSTVDGLEQGYV 311
>gi|312796956|ref|YP_004029878.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
gi|312168731|emb|CBW75734.1| ATP-dependent RNA helicase [Burkholderia rhizoxinica HKI 454]
Length = 508
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 137/224 (61%), Gaps = 6/224 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF L+ P+L+AIG Y PTPIQA IP+ L GRD+ G A TGTGKTA+F LPI++
Sbjct: 43 SFDGFGLAAPILQAIGEQGYTKPTPIQAQAIPIVLAGRDVMGAAQTGTGKTASFSLPIIQ 102
Query: 152 RLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
RLL + R L+L PTREL QV A+ T++ A+ GG+++ Q
Sbjct: 103 RLLPLASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTALRSAVVFGGVDMNPQT 162
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+ LR+ +I+IATPGRLLDH+ S SL+ +++LVLDEADRMLD F ++ I+ L
Sbjct: 163 AELRRGVEILIATPGRLLDHVQQK-STSLAQVQMLVLDEADRMLDMGFLPDLQRILNLLP 221
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
RQT+LFSAT + + L S L PV + V ++ A N+RQ
Sbjct: 222 SQRQTLLFSATFSAEIKKLASTYLRDPVTIEVARSNSTASNVRQ 265
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 137/230 (59%), Gaps = 7/230 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
APPV +F + L PLL+A+ + Y PT IQ ++P AL GRDI G A+TG+GKTA
Sbjct: 14 APPV----TFKSLGLIDPLLEALEQVGYKTPTDIQVESLPHALEGRDIIGVASTGSGKTA 69
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL++L D + VL PTREL Q+ Q L A+ VGG+++
Sbjct: 70 AFALPILQKLW---EDPKGLFACVLAPTRELAYQISQQFESLGSAMGARCAVIVGGMDMP 126
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P IV+ATPGRL+ HL T FSL I+ LVLDEADR+LD F + + +I++
Sbjct: 127 AQAIALAKRPHIVVATPGRLMQHLEETKGFSLRSIKFLVLDEADRLLDLDFGASIDKILK 186
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ + R T LFSATMT V L SL+ PVR+ V + ++ L Q ++
Sbjct: 187 VIPKERTTYLFSATMTTKVAKLQRASLSNPVRIEVSSKYQTVSTLLQYYL 236
>gi|424073352|ref|ZP_17810770.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407996213|gb|EKG36696.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDMRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|302188635|ref|ZP_07265308.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
642]
gi|443642767|ref|ZP_21126617.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
B64]
gi|443282784|gb|ELS41789.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
B64]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|66047019|ref|YP_236860.1| helicase [Pseudomonas syringae pv. syringae B728a]
gi|422673345|ref|ZP_16732705.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aceris
str. M302273]
gi|424068921|ref|ZP_17806369.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440722920|ref|ZP_20903290.1| helicase [Pseudomonas syringae BRIP34876]
gi|440727353|ref|ZP_20907589.1| helicase [Pseudomonas syringae BRIP34881]
gi|63257726|gb|AAY38822.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Pseudomonas syringae pv. syringae B728a]
gi|330971079|gb|EGH71145.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aceris
str. M302273]
gi|407996030|gb|EKG36527.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440360496|gb|ELP97768.1| helicase [Pseudomonas syringae BRIP34876]
gi|440364118|gb|ELQ01258.1| helicase [Pseudomonas syringae BRIP34881]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|422616661|ref|ZP_16685366.1| helicase [Pseudomonas syringae pv. japonica str. M301072]
gi|330896875|gb|EGH28465.1| helicase [Pseudomonas syringae pv. japonica str. M301072]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGGCAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|396459541|ref|XP_003834383.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
gi|312210932|emb|CBX91018.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
Length = 516
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/241 (44%), Positives = 142/241 (58%), Gaps = 13/241 (5%)
Query: 83 DAPPVEENS--------SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGC 134
DA P+E + +F + + L A L + PTPIQ IP+AL GRD+ G
Sbjct: 71 DAGPIETTTAQADVAKKTFADLGVREELCDACENLKFTTPTPIQTQAIPLALEGRDVIGL 130
Query: 135 AATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVA 194
A TG+GKTAAF+LPIL+ LL KP Q L+L PTREL Q+ Q L +V+ A
Sbjct: 131 AETGSGKTAAFVLPILQALLDKP---QALFGLILAPTRELAYQIAQQVDALGSIINVKCA 187
Query: 195 LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHF 254
VGG+++ Q L K P IV+ATPGRLLDHL NT FSL ++ +VLDEADR+LD F
Sbjct: 188 TLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDF 247
Query: 255 ASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEF 312
+ +I+R+ R R T LFSATM+ V L +L PVRV + ++H+V L Q +
Sbjct: 248 GPVLDKILRVLPRDGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRY 307
Query: 313 V 313
+
Sbjct: 308 L 308
>gi|71736956|ref|YP_273717.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289647906|ref|ZP_06479249.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422584568|ref|ZP_16659674.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598398|ref|ZP_16672660.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422680932|ref|ZP_16739203.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|71557509|gb|AAZ36720.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157456|gb|EFH98539.1| ATP-dependent RNA helicase SrmB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330869381|gb|EGH04090.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330988677|gb|EGH86780.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010277|gb|EGH90333.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 132/221 (59%), Gaps = 3/221 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L PLL+A+ LN+ +PT IQ +P AL GRDI G A+TG+GKTAAF LPIL++
Sbjct: 539 FRSLGLIDPLLEALEQLNFKHPTDIQVEALPHALQGRDIIGVASTGSGKTAAFALPILQK 598
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L +P+ VL PTREL Q+ Q L V VGGL++ Q L K
Sbjct: 599 LWEEPK---GLFACVLAPTRELAYQISQQFEGLGSAMGVRCVTIVGGLDMMAQSVALAKR 655
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P IV+ATPGRL+DHL NT FSL ++ LVLDEADR+LD F + +I+++ + R T
Sbjct: 656 PHIVVATPGRLIDHLENTKGFSLRGLKFLVLDEADRLLDMDFGPIIDKILKIIPKERTTY 715
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L SL+ PVRV V + L Q ++
Sbjct: 716 LFSATMTTKVAKLQRASLSNPVRVEVSEKYSTVSTLLQYYL 756
>gi|237745550|ref|ZP_04576030.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
gi|229376901|gb|EEO26992.1| ATP-dependent RNA helicase [Oxalobacter formigenes HOxBLS]
Length = 470
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 137/233 (58%), Gaps = 6/233 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F L+ +LKA+ L Y PTPIQ+ IPV L G+D+ G A TGTGKTA + LP+L+
Sbjct: 17 FGDFGLASEILKALDDLGYSSPTPIQSQAIPVILEGKDVMGAAQTGTGKTAGYSLPVLQS 76
Query: 153 LLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
LLY + R L+LVPTREL QVY+ R+ A++TS+ A+ GG+++ Q
Sbjct: 77 LLYYANASMSPARHPVRALILVPTRELADQVYEDVRKYAKYTSLRTAVVFGGVDMSGQTG 136
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+LR +I+IATPGRLLDH+ + +L +LVLDEADRMLD F ++ I+ L +
Sbjct: 137 ILRAGAEILIATPGRLLDHIQQK-NVNLGQTGILVLDEADRMLDMGFLPDLQRIVNLLPK 195
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
RQ +LFSAT + + L + L RPV V V + A N+ Q D+
Sbjct: 196 KRQNLLFSATFSSEIRKLANSFLDRPVSVEVARQNATADNVTQTVYRIDEADK 248
>gi|344249399|gb|EGW05503.1| putative ATP-dependent RNA helicase DDX27 [Cricetulus griseus]
Length = 486
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 105/139 (75%)
Query: 195 LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHF 254
S GGL+VK QE+ LR PDI+IATPGRL+DHLHN PSF LS IEVL+LDEADRMLDE+F
Sbjct: 13 FSAGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYF 72
Query: 255 ASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
QMKEIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 73 EEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIR 132
Query: 315 FSNIDEVRLYNVLGLMLLR 333
E ++ +L+R
Sbjct: 133 IRPNREGDREAIVAALLMR 151
>gi|440741996|ref|ZP_20921326.1| helicase [Pseudomonas syringae BRIP39023]
gi|440378082|gb|ELQ14712.1| helicase [Pseudomonas syringae BRIP39023]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|237798870|ref|ZP_04587331.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021724|gb|EGI01781.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|410079330|ref|XP_003957246.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
gi|372463831|emb|CCF58111.1| hypothetical protein KAFR_0D04630 [Kazachstania africana CBS 2517]
Length = 487
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 152/284 (53%), Gaps = 11/284 (3%)
Query: 38 KHDNIKNRQ--KLIGKKKQKRLAKEGKLKQVEAEEYEENEGG-----KEFFEDAPPVEEN 90
KH N + L K K K L + KLK+ EA + E G EDA E
Sbjct: 7 KHSKSNNTEISSLAAKIKAKALENQKKLKEDEAINSSDEEKGIIVKNNAAEEDAGNDETF 66
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SF ++NL L++A LNY PTPIQ+ +IP AL G+DI G A TG+GKTAAF +PIL
Sbjct: 67 ESFTELNLVPELIQACKNLNYEKPTPIQSKSIPPALNGKDIIGLAQTGSGKTAAFAIPIL 126
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L + D +L PTREL Q+ + L V VGG+ + Q L
Sbjct: 127 NSLWH---DQLPYYACILSPTRELAQQIKETFDSLGSLMGVRTVCIVGGMNMMDQARDLM 183
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTR 269
+ P I+IATPGRL+DHL NT FSL + LV+DEADR+LD F + I++ L + R
Sbjct: 184 RKPHIIIATPGRLMDHLENTRGFSLRKLRYLVMDEADRLLDMEFGPVLDRILKILPTEGR 243
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 244 TTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 287
>gi|422667305|ref|ZP_16727169.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330977878|gb|EGH77781.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ + L +A +LNY +PTPIQ +IP+AL RDI G A TG+GKTAAF LPIL+
Sbjct: 58 TFKELGIVDSLCEACESLNYKFPTPIQEKSIPIALQDRDIIGLAETGSGKTAAFALPILQ 117
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q L K
Sbjct: 118 ALLDKP---QPLFGLVLAPTRELAHQIGQAFEALGSSISLRCAVIVGGLDMVPQAVALGK 174
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL T FSL ++ LV+DEADR+LD F + ++++ R R+T
Sbjct: 175 KPHIIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPAIDKLLKFIPRERRT 234
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
LFSAT++ V L SL PVRV V +N
Sbjct: 235 YLFSATLSSKVESLQRASLRDPVRVSVSSN 264
>gi|416015105|ref|ZP_11562765.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. B076]
gi|416028719|ref|ZP_11571636.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422404416|ref|ZP_16481469.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320325391|gb|EFW81456.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327468|gb|EFW83481.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330877269|gb|EGH11418.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|301384847|ref|ZP_07233265.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
Max13]
gi|302059212|ref|ZP_07250753.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
K40]
gi|302130851|ref|ZP_07256841.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422297602|ref|ZP_16385235.1| ATP-dependent RNA helicase SrmB [Pseudomonas avellanae BPIC 631]
gi|422658705|ref|ZP_16721137.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331017330|gb|EGH97386.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|407990944|gb|EKG32917.1| ATP-dependent RNA helicase SrmB [Pseudomonas avellanae BPIC 631]
Length = 445
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 148/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
LFSAT A + +++ L P + V++ E+A R + ++ N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWL 237
>gi|405122110|gb|AFR96877.1| ATP-dependent rRNA helicase RRP3 [Cryptococcus neoformans var.
grubii H99]
Length = 484
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 132/222 (59%), Gaps = 3/222 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP N +F + +S L +A ++ + P+ IQA IP AL G+DI G A TG+GKT
Sbjct: 30 DAPEASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKT 89
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL+ L P Q LVL PTREL Q+ Q L V A+ VGG+++
Sbjct: 90 AAFSLPILQTLWENP---QPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDM 146
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P +++ATPGRL+DHL NT FSL ++ LV+DEADR+LD F + +++
Sbjct: 147 MSQSIALSKRPHVIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKVL 206
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
++ + R T LFSATMT V L SL +PVRV V + +
Sbjct: 207 KVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVEVSSKYST 248
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 136/222 (61%), Gaps = 4/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ + L +A L Y PTPIQ IP+AL GRD+ G A TG+GKTAAF+LP+L+
Sbjct: 29 TFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQ 88
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q L+L PTREL Q+ L SV L +GG+++ Q L K
Sbjct: 89 ALMDKP---QQFHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAIALGK 145
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGRLLDHL NT FSL ++ LVLDEADR+LD F + +++RL + R+T
Sbjct: 146 KPHVIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRLLPK-RKT 204
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATM+ V L SL+ PVRV V ++ A L Q ++
Sbjct: 205 YLFSATMSSKVESLQRASLSDPVRVSVSTKNQTASKLLQSYL 246
>gi|386010970|ref|YP_005929247.1| DEAD/DEAH box helicase [Pseudomonas putida BIRD-1]
gi|313497676|gb|ADR59042.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida BIRD-1]
Length = 440
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 140/223 (62%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ R L+L+PTREL Q + + +QFT V+ L GG + K Q ++LRK
Sbjct: 62 LVDLKGGRVEIRSLILLPTRELAQQTLKQVQLFSQFTYVKAGLVTGGEDFKEQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C QT+
Sbjct: 122 PDVLIGTPGRLLEQL-NAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENREQTL 180
Query: 273 LFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 181 LFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 223
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 147/261 (56%), Gaps = 10/261 (3%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
+AP E+ ++ + L+ L KA L + P+ IQ IPVAL G+DI G A TG+GKT
Sbjct: 51 EAPKCEQLQTWKDLGLNETLCKACEELKWKAPSKIQKEAIPVALQGKDIIGLAETGSGKT 110
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG+++
Sbjct: 111 GAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDM 167
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I+
Sbjct: 168 VAQGLQLAKKPHIIIATPGRLVDHLENLKGFNLKAIKYLVMDEADRILNMDFEVELDKIL 227
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNI 318
++ R R+T LFSATMT V L SL PV+V V N ++ L+Q + V + ++
Sbjct: 228 KVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVDQLQQYYIFIPVKYKDV 287
Query: 319 DEVRLYNVLG---LMLLRENC 336
V + N L M+ C
Sbjct: 288 YLVHILNELAGNSFMIFCSTC 308
>gi|26991217|ref|NP_746642.1| DEAD/DEAH box helicase [Pseudomonas putida KT2440]
gi|397696842|ref|YP_006534725.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|421524014|ref|ZP_15970641.1| DEAD/DEAH box helicase [Pseudomonas putida LS46]
gi|24986267|gb|AAN70106.1|AE016650_5 ATP-dependent RNA helicase, DEAD box family [Pseudomonas putida
KT2440]
gi|397333572|gb|AFO49931.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida DOT-T1E]
gi|402752259|gb|EJX12766.1| DEAD/DEAH box helicase [Pseudomonas putida LS46]
Length = 440
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 143/225 (63%), Gaps = 6/225 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
Query: 153 L--LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L L PR + R L+L+PTREL Q + + +QFT ++ L GG + K Q ++LR
Sbjct: 62 LVDLSGPRVE--IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLR 119
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA M+ + + C Q
Sbjct: 120 KVPDVLIGTPGRLLEQL-NAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENREQ 178
Query: 271 TMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
T+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 179 TLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 223
>gi|170722989|ref|YP_001750677.1| DEAD/DEAH box helicase [Pseudomonas putida W619]
gi|169760992|gb|ACA74308.1| DEAD/DEAH box helicase domain protein [Pseudomonas putida W619]
Length = 452
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 142/228 (62%), Gaps = 2/228 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E S F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+L
Sbjct: 10 EVTSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVL 69
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L RL+ R L+L+PTREL Q + + +QFT ++ L GG + K Q +
Sbjct: 70 PLLNRLVDLKGARVEIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQAA 129
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+LRK PD++I TPGRLL+ L N + LS ++V++LDEADRMLD FA M+ + + C
Sbjct: 130 MLRKVPDVLIGTPGRLLEQL-NAGNLDLSHVQVMILDEADRMLDMGFAEDMERLCKECEN 188
Query: 268 TRQTMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
QT+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 189 REQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQVIT 236
>gi|404401914|ref|ZP_10993498.1| DEAD/DEAH box helicase [Pseudomonas fuscovaginae UPB0736]
Length = 448
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L D+EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKDVEVLVLDEADRMLDMGFAEDVQRLVEECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQMNETTRQQIIT 223
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L +A L + PT IQ IPVAL G+D+ G A TG+GKT AF LPIL+ LL P Q
Sbjct: 6 LCEACDQLGWKSPTKIQIEAIPVALQGKDVIGLAETGSGKTGAFALPILQSLLASP---Q 62
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
LVL PTREL Q+ + L V+ A+ VGG+++ Q VL K P IVIATPG
Sbjct: 63 RLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPG 122
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RL+DHL NT FSL ++ LV+DEADR+L+ F +++ +I+++ R R+T LFSATMT
Sbjct: 123 RLIDHLENTKGFSLRAVKFLVMDEADRILNMDFETEVDKILKVIPRERRTFLFSATMTKK 182
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
V L +L PV+ V + L+Q ++
Sbjct: 183 VQKLQRAALKDPVKCAVSTKYTTVDKLQQYYI 214
>gi|346642808|ref|YP_258676.2| DEAD/DEAH box helicase [Pseudomonas protegens Pf-5]
gi|341579950|gb|AAY90832.2| DEAD/DEAH box helicase domain protein [Pseudomonas protegens Pf-5]
Length = 446
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+L+ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMLEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + +++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNSVSQLNETTRQQIIT 223
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 137/239 (57%), Gaps = 3/239 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
A P + +F + L PLL+A+ + Y PT IQ+ ++P AL GRDI G A TG+GKT
Sbjct: 11 SATPEAQKHTFKSLGLIDPLLEALEQVGYKSPTEIQSESLPHALEGRDIIGVAETGSGKT 70
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL++L +P+ VL PTREL Q+ Q L A+ VGG+++
Sbjct: 71 AAFALPILQKLWEEPK---GLFACVLAPTRELAYQISQQFEALGAAMGARCAVIVGGMDL 127
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P +V+ATPGRLL HL T FSL ++ LVLDEADR+LD F + +I+
Sbjct: 128 PTQAIALAKRPHVVVATPGRLLQHLEETKGFSLRTLKFLVLDEADRLLDMDFGPAIDKIL 187
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEV 321
+L + R T LFSATMT V L SL PVRV V ++ L Q ++ D+V
Sbjct: 188 KLIPKERTTYLFSATMTSKVAKLQRASLVNPVRVEVSGKYQTVSTLLQHYLLVPLKDKV 246
>gi|104782944|ref|YP_609442.1| DEAD/DEAH box helicase [Pseudomonas entomophila L48]
gi|95111931|emb|CAK16656.1| putative ATP-dependent RNA helicase, DEAD box family [Pseudomonas
entomophila L48]
Length = 454
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 148/239 (61%), Gaps = 9/239 (3%)
Query: 79 EFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
EFF A + F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG
Sbjct: 4 EFFALA---RGYAVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTG 60
Query: 139 TGKTAAFMLPILERL--LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
+GKTAAF+LP+L RL L PR + R L+L+PTREL Q + + +QFT ++ L
Sbjct: 61 SGKTAAFVLPLLNRLVDLSGPRVE--IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLV 118
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG + K Q ++LRK PD++I TPGRLL+ L N + LS ++VL+LDEADRMLD FA
Sbjct: 119 TGGEDFKEQAAMLRKVPDVLIGTPGRLLEQL-NAGNLDLSHVKVLILDEADRMLDMGFAE 177
Query: 257 QMKEIIRLCSRTRQTMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
M+ + + C QT+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 178 DMERLCKECENREQTLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 236
>gi|443917623|gb|ELU38297.1| ATP-dependent rRNA helicase RRP3 [Rhizoctonia solani AG-1 IA]
Length = 1028
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 149/266 (56%), Gaps = 20/266 (7%)
Query: 67 EAEEYEENEGGKEFFEDAP-------PVEENSS----FHQMNLSRPLLKAIGALNYIYPT 115
+ E+ E++E G E D+P PV SS F + L PLL+A+ + Y PT
Sbjct: 64 DVEDLEQSESGTE---DSPNDVTSVAPVAPKSSASATFDSLGLISPLLEALKQVGYSKPT 120
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
IQA IP AL G+D+ G A TG+GKTAAF LPIL++L +PR VL PTREL
Sbjct: 121 EIQAGIIPHALEGKDVIGVAETGSGKTAAFALPILQKLWDEPR---GLFACVLAPTRELA 177
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
Q+ Q L V A VGG+++ Q L K P I++ATPGRL DHL NT FSL
Sbjct: 178 YQIAQQFEALGSAIGVRCATIVGGMDMMSQSIALGK-PHIIVATPGRLNDHLENTKGFSL 236
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+ LVLDEADR+LD F + +I+++ R R T LFSATM+ V L SL PVR
Sbjct: 237 RGLRYLVLDEADRLLDMDFGPVIDKILKVLPRERNTFLFSATMSTKVAKLQRASLQNPVR 296
Query: 296 VFVDNNHEVALNLRQEFV--SFSNID 319
V V+ + L Q ++ F+N D
Sbjct: 297 VEVNGKYSTVSTLLQYYLLTPFANKD 322
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 136/227 (59%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E +F + + L++A L Y PTPIQA +IP AL RD+ G A TG+GKTAAF L
Sbjct: 50 ESAKTFKDLGIVDSLVEACDRLGYTNPTPIQAQSIPHALQNRDVIGLAETGSGKTAAFAL 109
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PI++ LL KP + LVL PTREL Q+ L ++ VA+ VGGL++ Q
Sbjct: 110 PIIQALLDKP---SHLFGLVLAPTRELAAQIAASFEALGSLVNLRVAVIVGGLDMVAQAI 166
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P IV+ATPGRL+DHL T FSL ++ LV+DEADR+LD F + +I++ R
Sbjct: 167 ALGKKPHIVVATPGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPR 226
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV 313
R+T LFSATM+ + L SL PVR+ + ++H+ L Q ++
Sbjct: 227 ERRTFLFSATMSSKIESLQRASLRDPVRISISSSSHQTVSTLIQNYI 273
>gi|365984991|ref|XP_003669328.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
gi|343768096|emb|CCD24085.1| hypothetical protein NDAI_0C04250 [Naumovozyma dairenensis CBS 421]
Length = 504
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 140/248 (56%), Gaps = 13/248 (5%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
E E+ +EN E FE +F ++NL L++A LNY PTPIQ+ +IP AL
Sbjct: 69 EEEDEDENSTSYETFE---------TFSELNLVPELIQACKNLNYSKPTPIQSKSIPPAL 119
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
G DI G A TG+GKTAAF +PIL L + D Q +L PTREL Q+ + L
Sbjct: 120 KGHDIIGLAQTGSGKTAAFAIPILNSLWH---DQQPYYACILAPTRELAQQIKETFDSLG 176
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
V VGG+ + Q L + P ++IATPGRL+DHL NT FSL ++ LV+DEA
Sbjct: 177 SLMGVRSVCIVGGMNMMDQARDLMRKPHVIIATPGRLMDHLENTKGFSLRKLKYLVMDEA 236
Query: 247 DRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
DR+LD F + I++ L ++ R T LFSATMT ++ L SLT PV+ V N ++
Sbjct: 237 DRLLDMEFGPVLDRILKILPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTV 296
Query: 306 LNLRQEFV 313
L Q +
Sbjct: 297 DTLVQTLI 304
>gi|398844840|ref|ZP_10601893.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM84]
gi|398254166|gb|EJN39270.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM84]
Length = 440
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 143/225 (63%), Gaps = 6/225 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLNR 61
Query: 153 L--LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L L PR + R L+L+PTREL Q + + +QFT ++ L GG + K Q ++LR
Sbjct: 62 LVDLSGPRVE--IRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLR 119
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K PD++I TPGRLL+ L N + LS ++V++LDEADRMLD FA M+ + + C Q
Sbjct: 120 KVPDVLIGTPGRLLEQL-NAGNLDLSHVQVMILDEADRMLDMGFAEDMERLCKECENREQ 178
Query: 271 TMLFSATMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
T+LFSAT A+ D++ L P + +++ ++A RQ+ ++
Sbjct: 179 TLLFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIIT 223
>gi|330923108|ref|XP_003300102.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
gi|311325897|gb|EFQ91780.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
Length = 516
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 148/253 (58%), Gaps = 12/253 (4%)
Query: 67 EAEEYEENEGGKEFFEDAPPV-----EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
E ++ E + G E E+A P E +F + + L A L + PTPIQ
Sbjct: 59 EEDQGEASASGAE--EEAEPATTGADEVKKTFADLGIREELCDACENLKFKNPTPIQTQA 116
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP+AL GRD+ G A TG+GKTAAF+LPIL+ LL KP Q L+L PTREL Q+ Q
Sbjct: 117 IPLALEGRDVIGLAETGSGKTAAFVLPILQSLLEKP---QPLFGLILAPTRELAYQIAQQ 173
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
L +V+ A VGG+++ Q L K P IV+ATPGRLLDHL NT FSL ++ +
Sbjct: 174 VDALGSIINVKCATLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYM 233
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-D 299
VLDEADR+LD F + +I+++ R R T LFSATM+ V +L +L PVRV +
Sbjct: 234 VLDEADRLLDLDFGPVLDKILKVLPREGRHTYLFSATMSSKVENLQRAALQNPVRVSISS 293
Query: 300 NNHEVALNLRQEF 312
++H+V L Q +
Sbjct: 294 SSHQVVSTLLQRY 306
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 173/304 (56%), Gaps = 19/304 (6%)
Query: 25 DAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKL-----KQVEAEEYEENEGGKE 79
+A+ D +++K +K +Q+ K+++ R+AK+ K K+ + EE +NE K+
Sbjct: 17 EAKNDVKSLAEKIKASAMKQKQE---KEEESRMAKKQKSAEKQEKREKREERSKNEA-KQ 72
Query: 80 FFEDAPP---VEENS--SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGC 134
ED VEE+ SF ++NL LL+ I + + PTPIQA IP AL G+DI G
Sbjct: 73 DSEDTSKEVTVEESKVESFSELNLIPELLETINEMKFTKPTPIQAEAIPHALEGKDIIGL 132
Query: 135 AATGTGKTAAFMLPILERLLYKPRDDQNTRV-LVLVPTRELGVQVYQVTRQLAQFTSVEV 193
A TG+GKTAAF +PIL+ L D Q LVL PTREL Q+ + L +
Sbjct: 133 AQTGSGKTAAFAIPILQSLW----DAQTPYFGLVLAPTRELAYQIKETFDALGSSMGLRT 188
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
VGG+++ Q L + P I++ATPGR++DHL +T FSL +++ LV+DEADR+LD
Sbjct: 189 VCIVGGMDMMDQARDLMRRPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMD 248
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
F + +I+++ R T LFSATMT V L SL PV+V V ++ A NL Q +
Sbjct: 249 FGPALDKILKVIPTQRTTYLFSATMTSKVEKLQRASLHNPVKVAVSTKYQTADNLVQSMM 308
Query: 314 SFSN 317
S+
Sbjct: 309 LVSD 312
>gi|374262391|ref|ZP_09620958.1| hypothetical protein LDG_7373 [Legionella drancourtii LLAP12]
gi|363537177|gb|EHL30604.1| hypothetical protein LDG_7373 [Legionella drancourtii LLAP12]
Length = 418
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 147/241 (60%), Gaps = 5/241 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + L PLL+A+ Y P+PIQA +IP L G D+ A TGTGKTA+F+LPIL+
Sbjct: 2 SFTSLGLIEPLLRAVSESGYNEPSPIQAQSIPTILRGNDLLASAQTGTGKTASFVLPILQ 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL +PR N T+VL+L PTREL QV++ RQ + S+ A+ GG+++ Q LR
Sbjct: 62 RLHNQPRAKSNHTKVLILTPTRELAAQVHESIRQYGKHLSLRSAVVFGGVKISPQMMKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+I++ATPGRL+D L+ + SD+ LVLDEADRMLD F +K II L + RQ
Sbjct: 122 GGVEILVATPGRLMD-LYQQRAIQFSDVNTLVLDEADRMLDMGFIHDIKRIINLLPKERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
+LFSAT ++A+ L L +PV + V + A+ ++Q + +D+ R + +L +
Sbjct: 181 NLLFSATFSEAIRTLAKGLLNKPVEIDVAPRNTTAIAVKQ---TVHPVDKNRKHALLSHL 237
Query: 331 L 331
+
Sbjct: 238 I 238
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Anolis carolinensis]
Length = 399
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++ ++ L +A L + PT IQ +IP+AL GRDI G A TG+GKT AF L
Sbjct: 13 EAAKSFKELGVTEVLCEACDQLGWKTPTKIQVESIPLALQGRDIIGLAETGSGKTGAFAL 72
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 73 PILQALLETP---QRFFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSL 129
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 130 ALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 189
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 190 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYV 235
>gi|398985369|ref|ZP_10691023.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
gi|399014054|ref|ZP_10716350.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398111891|gb|EJM01765.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398154210|gb|EJM42690.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
Length = 446
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + D++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLRDMIGKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|425898142|ref|ZP_18874733.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397891895|gb|EJL08373.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 445
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRL++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRLIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|426225488|ref|XP_004006898.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Ovis aries]
Length = 408
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 144/248 (58%), Gaps = 12/248 (4%)
Query: 70 EYEENEGGKEFFEDAPP----VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
E++ EG DAP VEE +F + ++ L +A L + PT IQ IP+A
Sbjct: 6 EHDSREG-----MDAPQTAVEVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLA 60
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L GRDI G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L
Sbjct: 61 LQGRDIIGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEAL 117
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
V+ A+ VGG++ Q L K P +VIATPGRL+DHL NT F+L ++ LV+DE
Sbjct: 118 GSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDE 177
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADR+L+ F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++
Sbjct: 178 ADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTV 237
Query: 306 LNLRQEFV 313
L+Q ++
Sbjct: 238 EKLQQYYL 245
>gi|399004628|ref|ZP_10707239.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
gi|398129239|gb|EJM18612.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
Length = 445
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRL++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRLIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|90023351|ref|YP_529178.1| putative ATP-dependent RNA helicase [Saccharophagus degradans 2-40]
gi|89952951|gb|ABD82966.1| DEAD/DEAH box helicase-like protein [Saccharophagus degradans 2-40]
Length = 436
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 138/221 (62%), Gaps = 1/221 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F ++ L + L KA+ L + PT +Q TIP L G+DI A TG+GKTAAF+LP+L +
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L PR + +TR L+L+PTREL +Q + Q A +T ++V L +GG K Q + +RK
Sbjct: 63 FLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATVRKN 122
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P++++ATPGRL++H+ N + SD+E LVLDE+DRMLD F M I +C+ RQ +
Sbjct: 123 PEVLVATPGRLVEHIKNG-NVDFSDLEFLVLDESDRMLDMGFQENMLAIAAVCNEERQNL 181
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSAT+ ++ L PVR+ VD+ E N+ Q+ V
Sbjct: 182 LFSATLKHKGIGGITGLLQDPVRIQVDSAKEGHSNITQQRV 222
>gi|410093986|ref|ZP_11290448.1| ATP-dependent RNA helicase SrmB [Pseudomonas viridiflava UASWS0038]
gi|409758627|gb|EKN43906.1| ATP-dependent RNA helicase SrmB [Pseudomonas viridiflava UASWS0038]
Length = 445
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 147/237 (62%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R ++L+PTREL Q + + +QFT V+ L GG + K Q ++LRK
Sbjct: 62 LIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLVTGGEDFKAQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L +EVLVLDEADRMLD F+ ++ + C+ QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV-SFSNIDEVRLYNVL 327
LFSAT A + +++ L P + ++N E+A R + V + N+ + ++ N L
Sbjct: 181 LFSATTGGAGLREMIGKVLKDPQHLQLNNVSELASGTRHQIVMADHNVHKEQVLNWL 237
>gi|298708839|emb|CBJ30797.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 819
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 85 PPVEEN-SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
PP + SF M L + L + I A+ Y PTP+Q ++PV L G D+ A TG+GKTA
Sbjct: 3 PPAKPKVGSFQAMGLGQDLFRGIMAMGYKVPTPVQRKSLPVTLAGADVVVMARTGSGKTA 62
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF++P+LE+L R ++L PTREL VQ R++++ + +AL VGG +
Sbjct: 63 AFLIPVLEKLGSH-SHKMGARSIILSPTRELAVQTLTFARKMSKLKDLRMALLVGGDSMD 121
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q + L PDI+IATPGRL+ HL P F+L +EV+V DEADR+ + FA Q++EI+R
Sbjct: 122 KQFTALADNPDIIIATPGRLMHHLQEVPEFTLRSVEVVVFDEADRLFEMGFAEQLREIMR 181
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRL 323
RQ++LFSATM + L PV + +D +++ L F++ ++D+
Sbjct: 182 GVPEERQSLLFSATMPKQLVQFARAGLKDPVLIRLDTESKISTELSLAFLTCRSLDKPAA 241
Query: 324 YNVLGLMLLRE 334
L LLRE
Sbjct: 242 L----LFLLRE 248
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A L Y PTPIQ +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 61 SFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 120
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L V+ A+ VGG+++ Q L K
Sbjct: 121 ALLDKP---QPLFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSIALGK 177
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 178 KPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 237
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSAT++ V L SL P+RV + +N ++ L Q ++
Sbjct: 238 YLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYI 280
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 10/261 (3%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
DAP ++ +++ + L L KA L + P+ IQ IPVAL G+D+ G A TG+GKT
Sbjct: 11 DAPEEDKPATWSDLGLVDVLCKACEQLKWAQPSKIQKEAIPVALQGKDVIGLAETGSGKT 70
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL+ LL P Q L+L PTREL Q+ + L V+ A+ VGG+++
Sbjct: 71 AAFALPILQSLLENP---QRYFALILTPTRELAFQISEQIEALGANIGVKCAVIVGGMDM 127
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q +L K P I+IATPGRLLDHL NT F+L ++ LV+DEADR+L+ F ++ +I+
Sbjct: 128 MSQALILAKKPHILIATPGRLLDHLENTKGFNLKALKYLVMDEADRILNMDFEVEVDKIL 187
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNI 318
++ R R T LFSATMT V L L PV+V V ++ L+Q + V F ++
Sbjct: 188 KVIPRERHTFLFSATMTKKVKKLQRACLRDPVKVEVSTKYQTVEKLQQYYIFIPVKFKDV 247
Query: 319 DEVRLYNVLG---LMLLRENC 336
V + N + M+ C
Sbjct: 248 YLVHILNEMAGNSFMIFCSTC 268
>gi|398999282|ref|ZP_10702030.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM18]
gi|398132217|gb|EJM21499.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM18]
Length = 448
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++ ++ L +A L + PT IQ +IP+AL GRDI G A TG+GKT AF L
Sbjct: 13 EAAKSFKELGVTEVLCEACDQLGWKTPTKIQVESIPLALQGRDIIGLAETGSGKTGAFAL 72
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 73 PILQALLETP---QRFFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDMMAQSL 129
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 130 ALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 189
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 190 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYV 235
>gi|294012034|ref|YP_003545494.1| putative helicase [Sphingobium japonicum UT26S]
gi|292675364|dbj|BAI96882.1| putative helicase [Sphingobium japonicum UT26S]
Length = 461
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L+ P+LKA+ A Y PTPIQA IPV L G+D+CG A TGTGKTAAF LP L+
Sbjct: 3 FTDLGLAEPILKALAAKKYASPTPIQAQAIPVLLKGKDLCGIAQTGTGKTAAFALPSLDH 62
Query: 153 LLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
P+ Q R+LVL PTREL Q+ Q R +F + V + GG+ + Q L
Sbjct: 63 FARNPKPTPLQGCRMLVLSPTRELAAQIAQSFRDYGRFLKLSVEVVFGGVPINRQIRALG 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DIV+ATPGRLLD L + +F++ D E+ VLDEAD+M+D F +K I +L + RQ
Sbjct: 123 RGVDIVVATPGRLLD-LIDQRAFTIKDTEIFVLDEADQMMDMGFIHPLKRIAKLLPKERQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNV 326
+ FSATM + L S L PV+V V A +RQ+ + +++ L N+
Sbjct: 182 NLFFSATMPGEIEALASQFLHDPVKVSVAPQSTTAERVRQQATFVNQMEKQALLNL 237
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 141/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE + E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEPDSPTEALQTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|197123442|ref|YP_002135393.1| DEAD/DEAH box helicase [Anaeromyxobacter sp. K]
gi|196173291|gb|ACG74264.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter sp. K]
Length = 478
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F +NLS L+A+ + +PTPIQA IP AL GRD+ G AATGTGKTAAF+LPI
Sbjct: 6 SPTFADLNLSEKTLQALERAGFEHPTPIQAQAIPPALGGRDVIGAAATGTGKTAAFLLPI 65
Query: 150 LERLL-YKPRD-------DQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
+ERL P+D R LVL PTREL VQ+ + + V AL +GG+
Sbjct: 66 IERLAGGAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELERFGRGRHVRGALVIGGVG 125
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q + LR ++++ATPGRL+DHL + L +EVLVLDEADRMLD FA Q+K I
Sbjct: 126 MGAQSAALRDH-EVIVATPGRLVDHLQQG-TARLDGLEVLVLDEADRMLDMGFAPQLKRI 183
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
+ + RQT+LFSATM V D L PVRV V + +A
Sbjct: 184 LARVPKVRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTLA 227
>gi|441639369|ref|XP_004090206.1| PREDICTED: probable ATP-dependent RNA helicase DDX27, partial
[Nomascus leucogenys]
Length = 786
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 133/254 (52%), Gaps = 58/254 (22%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
FFEDA +EN SF MNLSRPLLKAI A+ + PTPIQ A IPV LLG+DIC CAATGT
Sbjct: 255 FFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGT 314
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
G + E L D +L+ P R +
Sbjct: 315 G---GLDVKSQEAALRAAPD-----ILIATPGRLI------------------------- 341
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
L CP HL + IEVL+LDEADRMLDE+F QMK
Sbjct: 342 -------DHLHNCPSF----------HLSS--------IEVLILDEADRMLDEYFEEQMK 376
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNID 319
EIIR+CS RQTMLFSATMTD V DL SVSL PVR+FV++N +VA LRQEF+
Sbjct: 377 EIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNR 436
Query: 320 EVRLYNVLGLMLLR 333
E ++ +L R
Sbjct: 437 EGDREAIVAALLTR 450
>gi|432871166|ref|XP_004071865.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Oryzias latipes]
Length = 439
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + ++ L +A L + PT IQ IPVAL G+D+ G A TG+GKT AF LPIL+
Sbjct: 40 TFKDLGVTDVLCEACDQLGWKSPTKIQVEAIPVALQGKDVIGLAETGSGKTGAFALPILQ 99
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q VL K
Sbjct: 100 SLLASP---QRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAK 156
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IVIATPGRL+DH+ NT FSL ++ LV+DEADR+L+ F +++ +I+++ R R+T
Sbjct: 157 KPHIVIATPGRLIDHMENTKGFSLRALKFLVMDEADRILNMDFETEVDKILKVIPRERRT 216
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L +L PV+ V + L+Q +V
Sbjct: 217 FLFSATMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYV 258
>gi|365760375|gb|EHN02100.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 503
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 141/247 (57%), Gaps = 15/247 (6%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
AE NEG E FE SF+++NL L++A LNY PTPIQ+ +IP AL
Sbjct: 71 AENDNANEG--ESFE---------SFNELNLVPELIQACKNLNYSKPTPIQSKSIPPALK 119
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G DI G A TG+GKTAAF +PIL RL + D + +L PTREL Q+ + L
Sbjct: 120 GHDIIGLAQTGSGKTAAFAIPILNRLWH---DQEPYYACILAPTRELAQQIKEAFDSLGS 176
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
V VGG+ + Q L + P I+IATPGRL+DHL NT FSL ++ LV+DEAD
Sbjct: 177 LMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEAD 236
Query: 248 RMLDEHFASQMKEIIRLC-SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
R+LD F + I+++ ++ R T LFSATMT ++ L SLT PV+ V N ++
Sbjct: 237 RLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVD 296
Query: 307 NLRQEFV 313
L Q +
Sbjct: 297 TLVQALM 303
>gi|398963567|ref|ZP_10679679.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
gi|398149569|gb|EJM38213.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
Length = 446
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L+ LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALNERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|156089185|ref|XP_001611999.1| DEAD/DEAH box helicase domain containing protein [Babesia bovis]
gi|154799253|gb|EDO08431.1| DEAD/DEAH box helicase domain containing protein [Babesia bovis]
Length = 649
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 150/243 (61%), Gaps = 13/243 (5%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++++ + LSR L+KA+ + Y P+ IQ+ IPVAL G+D+ A TG+GK+AAF++P
Sbjct: 124 DTNWSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAETGSGKSAAFLIPT 183
Query: 150 LERLL----YKPRD-------DQ--NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
L+RL+ K +D +Q T+ L+L+PTREL Q Y V L Q + L
Sbjct: 184 LQRLITAGVIKQKDVDLTRGGNQRVGTKALILLPTRELAAQCYDVFLALTQNLTQNGVLI 243
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG+ VK QE+ LR+ P IV ATPG++LD + N+ + IE++VLDEADR+LD F
Sbjct: 244 TGGVPVKEQEAKLRRMPYIVFATPGKVLDIMLNSNCIHMDAIEIVVLDEADRLLDLGFKD 303
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
++ I++LC++ RQTMLFSAT+T+A +LV V+L P+ + VA L+ E +
Sbjct: 304 ELAHILQLCNKERQTMLFSATLTEATKELVPVALVNPIYIKATPKITVAKTLKCENIQLK 363
Query: 317 NID 319
+ D
Sbjct: 364 SDD 366
>gi|84997373|ref|XP_953408.1| DEAD-box family helicase [Theileria annulata strain Ankara]
gi|65304404|emb|CAI76783.1| DEAD-box family helicase, putative [Theileria annulata]
Length = 570
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 180/322 (55%), Gaps = 26/322 (8%)
Query: 7 EGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQV 66
E N++ E + E +D EE F E + N+ L+ ++ + A ++ +
Sbjct: 2 EKNQQSDESSADDGELILDVEEGFLDFFSEYDNQNVNKESNLVSERNEDLKAANHEINSL 61
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLK---AIGALNYIYPTPIQAATIP 123
E +N+ + N ++ L R +++ AI + Y PT IQ+ IP
Sbjct: 62 NTEPKAKNK-----------LLSNLNWSDFGLCRSIMRVGIAISEMGYQNPTIIQSKVIP 110
Query: 124 VALLGRDICGCAATGTGKTAAFMLPILERL--------LYKPRDDQNTR----VLVLVPT 171
+AL G+D+ G+GKTA+F++P L+RL L K + NTR LV++PT
Sbjct: 111 LALEGKDLLIMMIQGSGKTASFLIPTLQRLVVSGVLKQLTKEKQAYNTRFGTKALVILPT 170
Query: 172 RELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTP 231
REL Q +QV + L+++ S + L GG+ +K QE+ LR+ P+ +I TPGR LD L N+
Sbjct: 171 RELAAQCFQVFKSLSKYLSSKAILLTGGIPIKEQENRLRQFPETIICTPGRALDMLINSS 230
Query: 232 SFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLT 291
S ++ +IEV+++DEAD++L+ F + ++++ C+R RQTMLFSAT+T+ +LVS+SL
Sbjct: 231 SINVENIEVVIMDEADKLLELGFRDECLQVLKYCNRNRQTMLFSATLTEETKELVSLSLV 290
Query: 292 RPVRVFVDNNHEVALNLRQEFV 313
PV V VD+ +V+ L E +
Sbjct: 291 NPVYVKVDDPTKVSRTLEFEMM 312
>gi|384487072|gb|EIE79252.1| hypothetical protein RO3G_03957 [Rhizopus delemar RA 99-880]
Length = 462
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 134/227 (59%), Gaps = 3/227 (1%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E+ F + +S+ L +A +N+ +PT IQ +IP A+ GRDI G A TG+GKTAAF +P
Sbjct: 21 EDLKFSDLGVSKELCEACEKMNFKHPTEIQKESIPWAIEGRDIIGLAQTGSGKTAAFAIP 80
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
I++RL P Q VL PTREL Q+ + L V A+ VGG+++ Q
Sbjct: 81 IIQRLWQNP---QAFFACVLAPTRELAYQIAETFESLGSVIGVRCAVIVGGMDMMTQSIA 137
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K P I++ TPGRL DHL NT F+L ++ LV+DEADR+LD F ++ +I+++ R
Sbjct: 138 LAKRPHIIVCTPGRLQDHLENTKGFNLKHLKYLVMDEADRLLDLDFGPKIDQILKVIPRE 197
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
R T LFSATMT V L SL +PV+V V + L Q ++ F
Sbjct: 198 RNTFLFSATMTTKVAKLQRASLHKPVKVEVATKYSTVKTLLQYYLFF 244
>gi|301610484|ref|XP_002934776.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 399
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F ++ ++ L + L + PT IQ IPVAL GRDI G A TG+GKT AF L
Sbjct: 16 EEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 76 PILQTLLESP---QRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSL 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 133 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 193 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYV 238
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 16 EEPKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 76 PILQTLLESP---QRLYALVLTPTRELAFQISEQFEALGSSIGVKSAVIVGGIDMMSQSL 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P IVIATPGRL+DHL NT F+L I+ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 133 ALAKKPHIVIATPGRLIDHLENTKGFNLRAIKYLVMDEADRILNMDFETEVDKILKVIPR 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V+ L +L PV+ V + ++ L+Q +V
Sbjct: 193 DRKTFLFSATMTKKVHKLQRAALKDPVKCAVSSKYQTVEKLQQFYV 238
>gi|367006540|ref|XP_003688001.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
gi|357526307|emb|CCE65567.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 142/229 (62%), Gaps = 9/229 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP--- 148
SF + LS P +KAI + + TP+QA TIP L GRD+ G A TG+GKT AF+LP
Sbjct: 35 SFADLKLSEPTMKAIEKMGFENMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIE 94
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+L L YKPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 95 MLHSLKYKPRN--GTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADK 152
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +MK+IIR+ +
Sbjct: 153 LVKGVNMLIATPGRLLDHLQNTKGFVYKNLKALIIDEADRILEIGFEDEMKQIIRILPKE 212
Query: 269 -RQTMLFSATMTDAVNDLVSVSLTRP---VRVFVDNNHEVALNLRQEFV 313
RQ+MLFSAT T V DL +SL + + V D + A L Q +V
Sbjct: 213 DRQSMLFSATQTTKVEDLARMSLRKGPLFINVVTDKDTSTADGLEQGYV 261
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 138/228 (60%), Gaps = 5/228 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E +F + + L A L + PTPIQA IP+AL GRD+ G A TG+GKTAAF+L
Sbjct: 86 EARKTFADLGVREELCDACENLKFTNPTPIQAQAIPLALQGRDVIGLAETGSGKTAAFVL 145
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL K Q+ L+L PTREL Q+ Q L +V+ A VGG+++ Q
Sbjct: 146 PILQALLEK---QQSLFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAI 202
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I++ATPGRLLDHL NT FSL ++ +VLDEADR+LD F + +I+++ R
Sbjct: 203 ALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLPR 262
Query: 268 -TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV 313
R T LFSATM+ V L +L PVRV + ++H+V L Q ++
Sbjct: 263 EGRHTYLFSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTLLQRYI 310
>gi|398914196|ref|ZP_10656834.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM49]
gi|398951208|ref|ZP_10673906.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|426410872|ref|YP_007030971.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
gi|398156990|gb|EJM45400.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|398178936|gb|EJM66566.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM49]
gi|426269089|gb|AFY21166.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
Length = 446
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|389685466|ref|ZP_10176790.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis O6]
gi|388551119|gb|EIM14388.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis O6]
Length = 445
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRL++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRLIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|398870252|ref|ZP_10625599.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
gi|398209137|gb|EJM95820.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
Length = 446
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|50291507|ref|XP_448186.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661162|sp|Q6FNK8.1|RRP3_CANGA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49527497|emb|CAG61137.1| unnamed protein product [Candida glabrata]
Length = 493
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 131/223 (58%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+NL L++A LN+ PTPIQA IP AL G D+ G A TG+GKTAAF +PIL
Sbjct: 74 SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILN 133
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+L D Q VL PTREL Q+ + L V VGG+ + Q L +
Sbjct: 134 KLW---EDQQPYYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMR 190
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQ 270
P I+IATPGRL+DHL NT FSL +++ LV+DEADR+LD F + I+++ ++ R
Sbjct: 191 KPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIPTKGRT 250
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 251 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 293
>gi|358060304|dbj|GAA94058.1| hypothetical protein E5Q_00705 [Mixia osmundae IAM 14324]
Length = 447
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 132/233 (56%), Gaps = 4/233 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
D PP + + F + L PL K L Y P+ IQA +IP AL GRD+ A TG+GKT
Sbjct: 5 DEPPAQ-TADFSSLGLIEPLCKVCEQLGYKKPSEIQAQSIPFALQGRDLVALAQTGSGKT 63
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL+ L +P VL PTREL Q+ + + L V A+ VGG+++
Sbjct: 64 AAFALPILQALWNEP---SPFFACVLAPTRELAYQISEQFQALGSTIGVRCAVIVGGMDM 120
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P I++ATPGRL DHL NT FSL I+ LV+DEADR+LD F + I+
Sbjct: 121 MTQSIALSKRPHIIVATPGRLQDHLENTKGFSLKAIKYLVMDEADRLLDMDFGPVIDTIL 180
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
++ R R T LFSATMT V L SL+ PV+V V + L QE+ F
Sbjct: 181 KIIPRERNTFLFSATMTTKVAKLQRASLSNPVKVEVSTKYSTVDTLVQEYCFF 233
>gi|330808146|ref|YP_004352608.1| ATP-dependent RNA helicase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423695930|ref|ZP_17670420.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q8r1-96]
gi|327376254|gb|AEA67604.1| putative ATP-dependent RNA helicase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|388009311|gb|EIK70562.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q8r1-96]
Length = 448
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 139/233 (59%), Gaps = 8/233 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED P +F + + L +A +L Y PTPIQ +IP AL GRD+ G A TG+GK
Sbjct: 54 EDVAP----KTFKDLGVIDSLCEACESLGYKSPTPIQQESIPPALAGRDLIGLAETGSGK 109
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
TAAF LPIL+ LL KP Q LVL PTREL Q+ + L SV A+ VGG++
Sbjct: 110 TAAFALPILQALLDKP---QPLFGLVLAPTRELAYQISKSFEGLGILISVRCAVIVGGMD 166
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I
Sbjct: 167 MVTQSIALGKKPHIIVATPGRLLDHLENTKGFSLRALKYLVMDEADRLLDLDFGPILDKI 226
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+++ R R+T LFSATM+ V L SL P+RV + N ++ L Q ++
Sbjct: 227 LKVLPRERRTYLFSATMSSKVESLQRASLRDPLRVQISTNKYQTVSTLLQSYL 279
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF + ++ L +A L + PT IQ IPVAL G+D+ G A TG+GKT AF L
Sbjct: 34 ETVKSFKDLGVTEVLCEACDQLGWKSPTKIQIEAIPVALQGKDVIGLAETGSGKTGAFAL 93
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 94 PILQSLLASP---QRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSL 150
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
VL K P +VIATPGRL+DHL NT FSL ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 151 VLAKKPHVVIATPGRLIDHLENTKGFSLRALKFLVMDEADRILNMDFETEVDKILKVIPR 210
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + L+Q ++
Sbjct: 211 ERRTFLFSATMTKKVQKLERAALKDPVKCAVSTKYSTVDKLQQYYI 256
>gi|294942246|ref|XP_002783449.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239895904|gb|EER15245.1| DEAD box RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 134/226 (59%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E +F + + L KA L + +P+ IQ TIP AL GRD+ A TG+GKT AF +
Sbjct: 26 EHAVTFESLGVCPELCKACDVLQWEHPSKIQEETIPYALQGRDLIALAETGSGKTGAFAI 85
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PI+++LL + T VL PTREL VQ+ Q L ++ A VGGL++ Q
Sbjct: 86 PIIQKLLDAAPHRKLTWACVLAPTRELCVQIGQQFEGLGASINLTTATIVGGLDMVTQAM 145
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I++A+PGRL+DHL NT F L I+ LV+DEADR+L F + +I++ C R
Sbjct: 146 SLSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCPR 205
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQT LFSATMT+ V+ L SLTRPV+ V +VA L Q ++
Sbjct: 206 DRQTFLFSATMTNKVSQLQRASLTRPVKCEVARKFDVAKGLVQNYM 251
>gi|348569356|ref|XP_003470464.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Cavia porcellus]
Length = 406
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 143/242 (59%), Gaps = 4/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
E+++ G+E A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EQHDSGEEL-RPAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMALQGRDI 63
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 64 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 120
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 121 QCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 180
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 181 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 240
Query: 312 FV 313
++
Sbjct: 241 YL 242
>gi|301765214|ref|XP_002918023.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Ailuropoda melanoleuca]
Length = 406
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSATEAPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 156/271 (57%), Gaps = 9/271 (3%)
Query: 58 AKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPI 117
+ E + + E + EE E + E+AP ++ + L L KA L + P+ I
Sbjct: 11 SAESEGEDAEVKNTEETEQTPDPIEEAP-----VTWSDLGLVDVLCKACEQLKWKTPSKI 65
Query: 118 QAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQ 177
Q +IPVAL G+DI G A TG+GKTAAF LPIL+ LL P Q L+L PTREL Q
Sbjct: 66 QRESIPVALQGKDIIGLAETGSGKTAAFALPILQALLENP---QRHFALILTPTRELAFQ 122
Query: 178 VYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSD 237
+ + L V+ + VGGL++ Q +L K P I+IATPGRL+DHL NT F+L
Sbjct: 123 ISEQFEALGSGIGVKSIVIVGGLDMTSQALMLAKKPHIIIATPGRLVDHLSNTKGFNLRA 182
Query: 238 IEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
++ LV+DEADR+L+ F +++ +I+++ R R+T LFSATMT VN L L PVRV
Sbjct: 183 LKFLVMDEADRILNMDFEAEVDKILKVIPRERRTFLFSATMTKKVNKLQRACLQDPVRVE 242
Query: 298 VDNNHEVALNLRQEFVSF-SNIDEVRLYNVL 327
V ++ L Q +V + +V L ++L
Sbjct: 243 VSTKYQTVEKLLQYYVFIPAKFKDVYLVHIL 273
>gi|302690998|ref|XP_003035178.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
gi|300108874|gb|EFJ00276.1| hypothetical protein SCHCODRAFT_14350 [Schizophyllum commune H4-8]
Length = 449
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
E+A +F + L PLL+A+ +++ PT IQA +P AL GRDI G A+TG+GK
Sbjct: 5 EEASTSAAAPTFKSLGLIDPLLEALDKMSFKAPTEIQAQALPHALEGRDIIGVASTGSGK 64
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
TAAF LPIL++L P+ VL PTREL Q+ Q L V A+ VGG +
Sbjct: 65 TAAFALPILQKLWDDPK---GLFACVLAPTRELAYQISQQFEALGSAMGVRCAVIVGGTD 121
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q+ L K P IV+ATPGRL DHL T F+L I+ LVLDEADR+LD F + +I
Sbjct: 122 IMAQKVALAKRPHIVVATPGRLDDHLEKTKGFNLRGIKFLVLDEADRLLDMDFGPVIDKI 181
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+++ + R T LFSATMT V L SL+ PVRV V+ ++ +L Q ++
Sbjct: 182 LKVIPKERTTYLFSATMTTKVAKLQRASLSNPVRVEVNTKYQTVDSLLQYYL 233
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
+ A VEE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GK
Sbjct: 17 QTAVEVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGK 76
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++
Sbjct: 77 TGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 133
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I
Sbjct: 134 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 193
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 194 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 245
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 58 EEHDSSAEAPQTAVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 117
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 118 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 174
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 175 QCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 234
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 235 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 294
Query: 312 FV 313
++
Sbjct: 295 YL 296
>gi|403164869|ref|XP_003324940.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165434|gb|EFP80521.2| hypothetical protein PGTG_06477 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 518
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 140/241 (58%), Gaps = 5/241 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E + +F ++ L L +A LNY PTPIQA +IP AL RDI G A TG+GKTAAF L
Sbjct: 69 EVSKTFEELGLIPELCEACRTLNYKRPTPIQAESIPYALEDRDIIGLAQTGSGKTAAFAL 128
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L+ L P+ VL PTREL Q+ Q L V+ A+ VGG+++ Q
Sbjct: 129 PVLQSLWNDPKP---FFCCVLAPTRELAYQISQQFDALGSTIGVKTAVIVGGIDMMSQAI 185
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I++ATPGRL DHL NT FSL +++ L++DEADR+LD F + +I+++ R
Sbjct: 186 ALSKRPHIIVATPGRLHDHLENTKGFSLRNLKYLIMDEADRLLDMDFGPVIDKILKVIPR 245
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVSFSNIDEVRLYN 325
R+T LFSATMT V L SL PV+V + ++ L Q F F N D +Y
Sbjct: 246 ERRTYLFSATMTTKVAKLQRASLVSPVKVQMSTKYDTVDGLVQLYMFFPFKNKDAYLVYL 305
Query: 326 V 326
V
Sbjct: 306 V 306
>gi|209877961|ref|XP_002140422.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556028|gb|EEA06073.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 442
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 3/225 (1%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
EN +F + + + L A +L ++ PT IQ IP+AL G DI G A TG+GKT AF+LP
Sbjct: 27 ENITFASLGVCKELCLACESLGWLKPTDIQREAIPIALRGGDIIGLAETGSGKTGAFILP 86
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
IL+ LL + +VL PTREL VQ+ + L S++VA VGG+++ Q
Sbjct: 87 ILQSLL---ENQSRMYSVVLAPTRELCVQISEQFSALGSLISLQVANIVGGMDMVNQALS 143
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K P I++A+PGRL+DHL NT F++S ++ LV+DEADR+L F + +II C +
Sbjct: 144 LAKKPHIIVASPGRLVDHLENTKGFNISSVKYLVMDEADRLLSMDFEIALTKIIEACPKN 203
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R T LFSATMT V L VSL PV++ V+ ++ A NL Q ++
Sbjct: 204 RNTYLFSATMTTKVAKLQRVSLKNPVKICVNTKYDTAENLLQYYM 248
>gi|424921971|ref|ZP_18345332.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
gi|404303131|gb|EJZ57093.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
Length = 446
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 139/226 (61%), Gaps = 3/226 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ +S+PL A L ++ P+ IQ A +P AL G+D+ G A TG+GKT AF +P+L+
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ Q L + A+ VGG+++ Q L +
Sbjct: 105 SLLDHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALAR 161
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL NT F+L ++ L++DEADR+L+ F ++ +I+++ R R+T
Sbjct: 162 RPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRT 221
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
LFSATMT V+ L SL P RV V + ++ NL+Q ++ N
Sbjct: 222 YLFSATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPN 267
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + ++ L A +L + PT IQ IP+AL GRDI G A TG+GKTAAF LPIL+
Sbjct: 59 SFADLGVNESLCDACTSLGFKTPTAIQREAIPLALSGRDIIGLAETGSGKTAAFALPILQ 118
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL+ P Q LVL PTREL Q+ Q L V A+ VGG+++ Q L K
Sbjct: 119 ALLHDP---QPFFGLVLAPTRELAYQISQQFEALGSLIRVRCAVIVGGMDMVPQAIALAK 175
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IV+ATPGRLLDHL NT FSL ++ L++DEADR+LD F + +I+++ R R+T
Sbjct: 176 KPHIVVATPGRLLDHLENTKGFSLRSLKYLIMDEADRLLDLDFGPILDKILQVLPRERRT 235
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVD-NNHEVALNLRQEFV 313
LFSATM +++L +L PVRV + ++++ NL Q+++
Sbjct: 236 ALFSATMNTKLDNLTRAALRNPVRVSISTSSYQTVANLLQQYI 278
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 146/252 (57%), Gaps = 10/252 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
++ + + L KA L + PT IQ IP+AL G+DI G A TG+GKTAAF LPIL+
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQYEAIPLALEGKDIIGLAETGSGKTAAFALPILQ 78
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q +L K
Sbjct: 79 ALLENP---QRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALILAK 135
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I+IATPGRL+DHL NT FSL ++ LV+DEADR+L+ F ++ +I+R+ R R+T
Sbjct: 136 KPHILIATPGRLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERKT 195
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVL 327
+LFSATMT V L SL PV+V V ++ L+Q + V F ++ V + N L
Sbjct: 196 LLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNEL 255
Query: 328 G---LMLLRENC 336
M+ C
Sbjct: 256 AGNSFMIFCATC 267
>gi|255711788|ref|XP_002552177.1| KLTH0B08998p [Lachancea thermotolerans]
gi|238933555|emb|CAR21739.1| KLTH0B08998p [Lachancea thermotolerans CBS 6340]
Length = 492
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/246 (42%), Positives = 150/246 (60%), Gaps = 19/246 (7%)
Query: 62 KLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
K + +A E EN+G KE F ++NLS P +KAI + + T +Q+ T
Sbjct: 11 KKRSADAVEASENDGYKE------------KFAELNLSPPTMKAIDKMGFTTMTQVQSRT 58
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQV 178
IP L GRD+ G A TG+GKT AF+LP +L L +KPR+ T V+V+ PTREL +Q+
Sbjct: 59 IPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKPRN--GTGVIVITPTRELALQI 116
Query: 179 YQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDI 238
+ V + L +F S + +GG + + L K +++IATPGRLLDHL NT F ++
Sbjct: 117 FGVAKTLMEFHSQTFGIVIGGANRRQEADKLAKGVNLLIATPGRLLDHLQNTKDFVFKNL 176
Query: 239 EVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVF 297
+ LV+DEADR+L+ F +M++I++ L S RQTMLFSAT T V DL +SL RP +F
Sbjct: 177 KALVIDEADRILEIGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISL-RPGPLF 235
Query: 298 VDNNHE 303
++ + E
Sbjct: 236 INVDSE 241
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
+ A VEE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GK
Sbjct: 17 QTAVEVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGK 76
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++
Sbjct: 77 TGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGID 133
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I
Sbjct: 134 SMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKI 193
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 194 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 245
>gi|398382811|ref|ZP_10540892.1| DNA/RNA helicase, superfamily II [Sphingobium sp. AP49]
gi|397726211|gb|EJK86652.1| DNA/RNA helicase, superfamily II [Sphingobium sp. AP49]
Length = 460
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 138/237 (58%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F+++ LS P+LKA+ A NY PTPIQ IPV L GRD+CG A TGTGKTAAF LP L+
Sbjct: 3 FNELGLSEPILKALSAKNYATPTPIQQKAIPVLLEGRDLCGIAQTGTGKTAAFALPSLDY 62
Query: 153 LLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
P+ + R+LVL PTREL Q+ Q R +F + V GG+ + Q L
Sbjct: 63 FARNPKPTPIKGCRMLVLSPTRELAAQIAQSFRDYGRFMRLSVETVFGGVPIGKQIRALS 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
DIV+ATPGRLLD L + +F++ D E+ VLDEAD+M+D F +K + ++ R RQ
Sbjct: 123 AGVDIVVATPGRLLD-LIDQRAFTIKDTEIFVLDEADQMMDMGFIHPLKRVAKMLPRDRQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
+ FSATM + L + L PV+V V A +RQ+ + ++ L +++
Sbjct: 182 NLFFSATMPKEIEALAAQFLNDPVKVSVAPQSTTAERVRQQMTFVNQAEKQALLHIV 238
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 144/248 (58%), Gaps = 12/248 (4%)
Query: 70 EYEENEGGKEFFEDAPP----VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
E++ EG DAP VEE +F + ++ L +A L + PT IQ IP+A
Sbjct: 6 EHDSREG-----MDAPQTAVEVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLA 60
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L GRDI G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L
Sbjct: 61 LQGRDIIGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEAL 117
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
V+ A+ VGG++ Q L K P +VIATPGRL+DHL NT F+L ++ LV+DE
Sbjct: 118 GSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDE 177
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADR+L+ F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++
Sbjct: 178 ADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTV 237
Query: 306 LNLRQEFV 313
L+Q ++
Sbjct: 238 EKLQQYYL 245
>gi|336270890|ref|XP_003350204.1| hypothetical protein SMAC_01096 [Sordaria macrospora k-hell]
gi|380095599|emb|CCC07072.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 507
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 4/220 (1%)
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L +A L Y PTPIQA +IP+AL RDI G A TG+GKTAAF LPIL+ LL KP Q
Sbjct: 108 LCEACERLGYKNPTPIQAESIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKP---Q 164
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
LVL PTREL Q+ Q L S+ AL +GG+++ Q L K P +++ATPG
Sbjct: 165 PLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPG 224
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RLLDHL T FSL ++ LV+DEADR+LD F +++I++ R R+T LFSATM+
Sbjct: 225 RLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILKFLPRERRTFLFSATMSSK 284
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALN-LRQEFVSFSNIDE 320
V L SL P++V V N ++ L+ +V ++ +
Sbjct: 285 VESLQRASLRDPLKVSVSTNKYATVSTLKSNYVFIPHMHK 324
>gi|261194144|ref|XP_002623477.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
gi|239588491|gb|EEQ71134.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis
SLH14081]
Length = 465
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 5/212 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + L +A L Y PTPIQA +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 57 SFKDLGIIDSLCEACETLGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 116
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ L+L PTREL Q+ L SV A+ VGG+++ Q L K
Sbjct: 117 ALMEKP---QSLFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDMVPQAIALGK 173
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IV+ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 174 KPHIVVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDLDFGPILDKILKVLPRERRT 233
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRV--FVDNN 301
LFSATM+ V L SL+ +R+ F+ N
Sbjct: 234 YLFSATMSSKVESLQRASLSSGLRLPSFIPTN 265
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 139/226 (61%), Gaps = 3/226 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ +S+PL A L ++ P+ IQ A +P AL G+D+ G A TG+GKT AF +P+L+
Sbjct: 45 TFAELGVSQPLCDACHRLGWVKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ Q L + VA+ VGG+++ Q L +
Sbjct: 105 SLLDHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALAR 161
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL NT F+L ++ L++DEADR+L+ F ++ +I+++ R R+T
Sbjct: 162 RPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRT 221
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
LFSATMT V+ L SL P RV + ++ NL+Q ++ N
Sbjct: 222 YLFSATMTKKVSKLERASLRDPARVSISTRYKTVDNLKQHYIFVPN 267
>gi|149713748|ref|XP_001501504.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Equus caballus]
Length = 406
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSPTEVPQPAVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|400595961|gb|EJP63749.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 472
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 139/228 (60%), Gaps = 4/228 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ + L ++ ++ Y PT IQA +IPVAL GRD+ G A TG+GKTAAF LP+L+
Sbjct: 51 TFKELGIVDALCESCESVGYTTPTSIQAKSIPVALQGRDVIGLAETGSGKTAAFALPMLQ 110
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L S+ A+ VGGL++ Q L K
Sbjct: 111 ALLEKP---QPLFGLVLAPTRELAAQIGQTFEALGALISLRCAVIVGGLDMVPQAIALGK 167
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGRL+DHL T FSL ++ LV+DEADR+LD F + ++++ R R+T
Sbjct: 168 KPHVIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRLLDMDFGPSIDKLLKFVPRERRT 227
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFVSFSNI 318
LFSATM+ V L SL PVRV V ++ ++ L Q +V +I
Sbjct: 228 YLFSATMSSRVESLQRASLRDPVRVSVSSSKYQTVSTLLQHYVFIPHI 275
>gi|66357446|ref|XP_625901.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226956|gb|EAK87922.1| Rrp3p, eIF4A-1-family RNA SFII helicase (DEXDc+HELICc)
[Cryptosporidium parvum Iowa II]
Length = 446
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + + L A +L + PT IQ TIPVAL GRDI G A TG+GKT +F++PIL+
Sbjct: 34 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 93
Query: 152 RLLYKPRDDQ-NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RLL DDQ ++L PTREL VQ+ + S+++A VGGL++ +Q L
Sbjct: 94 RLL----DDQVPMYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLA 149
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K P I++A+PGRL+DHL NT F++ I+ LV+DEADR+L F + +I+ R R
Sbjct: 150 KKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPRNRT 209
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT V L +SL+ P+++ V+ ++ A NL Q ++
Sbjct: 210 TYLFSATMTTKVAKLQKISLSNPIKICVNTKYDTAANLMQYYM 252
>gi|367001072|ref|XP_003685271.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
gi|357523569|emb|CCE62837.1| hypothetical protein TPHA_0D01990 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 149/267 (55%), Gaps = 11/267 (4%)
Query: 54 QKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSS------FHQMNLSRPLLKAIG 107
QK+L + G E++E E ++ +EEN+S F++++L L++A
Sbjct: 33 QKKLKETGTTSMNESDE-ETGNTKRQVIRTEADIEENTSEKTFTSFNELDLVPELIQACH 91
Query: 108 ALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLV 167
LN+ PTPIQ+ +IP AL G DI G A TG+GKTAAF +PIL +L D Q +
Sbjct: 92 NLNFSKPTPIQSKSIPPALEGHDIIGLAQTGSGKTAAFAIPILNKLW---EDQQPYYACI 148
Query: 168 LVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHL 227
L PTREL Q+ + L V VGG+ + Q L + P I+IATPGRL+DHL
Sbjct: 149 LAPTRELAQQIKETFDSLGSLMGVRSVCIVGGMNMMDQSRELMRKPHIIIATPGRLMDHL 208
Query: 228 HNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQTMLFSATMTDAVNDLV 286
NT FSL ++ LV+DEADR+LD F + I+++ ++ R T LFSATMT + L
Sbjct: 209 ENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQDRTTYLFSATMTSKIEKLQ 268
Query: 287 SVSLTRPVRVFVDNNHEVALNLRQEFV 313
SLT PV+ V N ++ L Q +
Sbjct: 269 RASLTNPVKCAVSNKYQTVETLVQTLM 295
>gi|15239187|ref|NP_201391.1| DEAD-box ATP-dependent RNA helicase 27 [Arabidopsis thaliana]
gi|108861887|sp|Q9SB89.2|RH27_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 27
gi|2827700|emb|CAA16673.1| DEAD box ATP dependent helicase protein [Arabidopsis thaliana]
gi|9759574|dbj|BAB11137.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|16649121|gb|AAL24412.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|24899721|gb|AAN65075.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|332010738|gb|AED98121.1| DEAD-box ATP-dependent RNA helicase 27 [Arabidopsis thaliana]
Length = 633
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N +F ++LS K+I + + T IQA IP ++G D+ G A TG+GKT AF++P
Sbjct: 153 NKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPA 212
Query: 150 LE---RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+E R+ + PR+ T VLV+ PTREL +Q Y V ++L ++ S V +GG + K +
Sbjct: 213 VELLYRVKFTPRN--GTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEA 270
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+L K ++++ATPGRLLDHL NT F +++ LV+DEADR+L+++F +K+I+ L
Sbjct: 271 EILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLP 330
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
+TRQT LFSAT + V DL VSLT PV + VD + N
Sbjct: 331 KTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTN 371
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 142/242 (58%), Gaps = 10/242 (4%)
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L KA L + PT IQ IP+AL G+DI G A TG+GKTAAF LPIL+ LL P Q
Sbjct: 29 LHKACEDLKWKSPTKIQCEAIPLALEGKDIIGLAETGSGKTAAFALPILQALLENP---Q 85
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
L+L PTREL Q+ + L V+ A+ VGG+++ Q +L K P I+IATPG
Sbjct: 86 RYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPHILIATPG 145
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RL+DHL NT FSL ++ LV+DEADR+L+ F ++ +I+R+ R R+T+LFSATMT
Sbjct: 146 RLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERKTLLFSATMTKK 205
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVLG---LMLLRE 334
V L SL PV+V V ++ L+Q + V F ++ V + N L M+
Sbjct: 206 VQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCA 265
Query: 335 NC 336
C
Sbjct: 266 TC 267
>gi|426371743|ref|XP_004052801.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Gorilla gorilla gorilla]
Length = 406
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|398978205|ref|ZP_10687628.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
gi|398137316|gb|EJM26378.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
Length = 446
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 144/245 (58%), Gaps = 8/245 (3%)
Query: 74 NEGGKEFFEDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRD 130
N G E +A V E +F + + L A L + PTPIQA IP+AL GRD
Sbjct: 69 NASGSEQEAEAATVGADEAKKTFADLGVREELCDACENLKFTNPTPIQAQAIPLALEGRD 128
Query: 131 ICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
+ G A TG+GKTAAF+LPIL+ LL K Q+ L+L PTREL Q+ Q L +
Sbjct: 129 VIGLAETGSGKTAAFVLPILQALLEK---QQSLFGLILAPTRELAYQIAQQVDALGSIIN 185
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
V+ A VGG+++ Q L K P I++ATPGRLLDHL NT FSL ++ +VLDEADR+L
Sbjct: 186 VKCATLVGGMDMVPQAIALSKKPHIIVATPGRLLDHLENTKGFSLKHLKYMVLDEADRLL 245
Query: 251 DEHFASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNL 308
D F + +I+++ R R T L+SATM+ V L +L PVRV + ++H+V L
Sbjct: 246 DLDFGPVLDKILKVLPREGRHTYLYSATMSSKVESLQRAALQNPVRVSISSSSHQVVSTL 305
Query: 309 RQEFV 313
Q ++
Sbjct: 306 LQRYI 310
>gi|323508819|dbj|BAJ77303.1| cgd4_3180 [Cryptosporidium parvum]
gi|323510507|dbj|BAJ78147.1| cgd4_3180 [Cryptosporidium parvum]
Length = 441
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + + L A +L + PT IQ TIPVAL GRDI G A TG+GKT +F++PIL+
Sbjct: 29 TFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGRDIIGLAETGSGKTGSFIIPILQ 88
Query: 152 RLLYKPRDDQ-NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RLL DDQ ++L PTREL VQ+ + S+++A VGGL++ +Q L
Sbjct: 89 RLL----DDQVPMYAVILAPTRELCVQISEQFSAFGSLISLKIATLVGGLDMVMQSLSLA 144
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K P I++A+PGRL+DHL NT F++ I+ LV+DEADR+L F + +I+ R R
Sbjct: 145 KKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADRLLSMDFEIALNKIVESSPRNRT 204
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT V L +SL+ P+++ V+ ++ A NL Q ++
Sbjct: 205 TYLFSATMTTKVAKLQKISLSNPIKICVNTKYDTAANLMQYYM 247
>gi|237747736|ref|ZP_04578216.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229379098|gb|EEO29189.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 469
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 139/226 (61%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ F LS +LKA+ L Y+ PTPIQ IP+ L G+D+ G A TGTGKTA + LP+
Sbjct: 14 DKKFEDFGLSPDILKALDDLGYVSPTPIQVQAIPLVLEGKDVMGAAQTGTGKTAGYSLPM 73
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+ LL+ + R L+LVPTREL QV++ ++ A++T V+ A+ GG+++
Sbjct: 74 LQSLLFSANTSMSPARHPVRALILVPTRELADQVFEDVKRYAKYTPVKSAVVFGGVDISS 133
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q S+LR +I+IATPGRLLDH+ + +LS ++LVLDEADRMLD F ++ I+ L
Sbjct: 134 QTSILRAGVEILIATPGRLLDHVQQK-NVNLSHTQILVLDEADRMLDMGFLPDLQRIVNL 192
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQ +LFSAT ++ + L + PV V V + A N++Q
Sbjct: 193 LPKQRQNLLFSATFSNDIKKLARSFMKDPVTVEVARQNATAENVKQ 238
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 131/221 (59%), Gaps = 3/221 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F ++ + PLL+A+ +N+ PT IQA +P A+ GRDI G A TG+GKT AF LPIL+R
Sbjct: 17 FKELGVIGPLLEALEQMNFKKPTDIQAEALPHAISGRDIIGVAETGSGKTVAFALPILQR 76
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L +P+ VL PTREL Q+ Q L V A+ VGG+ + Q L K
Sbjct: 77 LWEEPK---GLFACVLAPTRELAYQISQQFESLGSAIGVRCAVIVGGMNMVDQAVALAKR 133
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P IV+ATPGRL DHL NT FSL I+ LVLDEADR+LD F + +I+++ + R T
Sbjct: 134 PHIVVATPGRLNDHLENTKGFSLRGIKFLVLDEADRLLDMDFGPIIDKILKVIPKERTTY 193
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L SLT PVRV V + L Q ++
Sbjct: 194 LFSATMTTKVAKLQRASLTNPVRVEVSKKYTTVSTLLQYYL 234
>gi|255723333|ref|XP_002546600.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
gi|240130731|gb|EER30294.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
Length = 572
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 147/234 (62%), Gaps = 13/234 (5%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E F +LS P +KAI + + T +QA TIP L GRD+ G A TG+GKT AF++P
Sbjct: 111 EEHLFEDADLSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIP 170
Query: 149 ILERLLY----KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
+E LLY KPR+ T V+++ PTREL +Q++ V R+L Q+ S + +GG + +
Sbjct: 171 AIE-LLYSLKIKPRN--GTAVIIITPTRELALQIFGVARELMQYHSQTCGIVIGGADRRQ 227
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR- 263
+ + L K ++++ATPGRLLDHL NTP F S+++ LV+DEADR+L+ F +MK+II+
Sbjct: 228 EATKLAKGVNLLVATPGRLLDHLKNTPGFVFSNLKALVIDEADRILEIGFEDEMKQIIKI 287
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRP----VRVFVDNNHEVALNLRQEFV 313
L + RQ+MLFSAT T V DL +SL RP + V D + A L Q +V
Sbjct: 288 LPNEDRQSMLFSATQTTKVEDLARMSL-RPGPLYINVVPDKDVSTADGLEQGYV 340
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + ++ L +A L + PT IQ IPVAL G+D+ G A TG+GKT AF LPIL+
Sbjct: 40 TFKDLGVTDVLCEACDQLGWKSPTKIQVEAIPVALQGKDVIGLAETGSGKTGAFALPILQ 99
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q VL K
Sbjct: 100 SLLASP---QRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAK 156
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IVIATPGRL+DH+ NT FSL ++ LV+DEADR+L+ F +++ +I+++ R R+T
Sbjct: 157 KPHIVIATPGRLIDHMENTKGFSLRALKFLVMDEADRILNMDFETEVDKILKVIPRERRT 216
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L +L PV+ V + L+Q +V
Sbjct: 217 FLFSATMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYV 258
>gi|410963866|ref|XP_003988480.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Felis catus]
Length = 406
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSPTEAPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
+V
Sbjct: 242 YV 243
>gi|406860112|gb|EKD13172.1| ATP-dependent rRNA helicase RRP3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 497
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 139/235 (59%), Gaps = 8/235 (3%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG+E + P +SF + + L A AL Y PTPIQA +IP+AL RD+ A
Sbjct: 61 GGEEAQTEVP-----TSFKDLGIVDELCDACTALGYKAPTPIQAESIPLALQDRDLIALA 115
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TG+GKTAAF LPIL+ LL KP Q LVL PTREL Q+ Q L V A+
Sbjct: 116 ETGSGKTAAFALPILQSLLDKP---QPFFGLVLAPTRELAYQISQSFEALGSKIGVRCAV 172
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGG+++ Q L K P I++A+PGRLLDHL NT FSL ++ LV+DEADR+LD F
Sbjct: 173 IVGGMDMVPQAIALGKKPHIIVASPGRLLDHLENTKGFSLRALKYLVMDEADRLLDLDFG 232
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ + +I+++ R R+T LFSATM+ V L SL P+RV V ++ L Q
Sbjct: 233 AIIDKILKVIPRERRTYLFSATMSSKVESLQRASLKDPLRVSVSTKYQTVSTLIQ 287
>gi|149238155|ref|XP_001524954.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032522|sp|A5E2Z9.1|HAS1_LODEL RecName: Full=ATP-dependent RNA helicase HAS1
gi|146451551|gb|EDK45807.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 559
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 174/309 (56%), Gaps = 36/309 (11%)
Query: 3 SSDEEGNKEDKEDNEGSEEDDVDAEE-------DFALPDDEMKHDNIKNRQKLIGKKKQK 55
S ++ N D ++ +E D D EE D A PD + K K+ +K
Sbjct: 18 SREDADNSNDTNEDAAIQEVDADFEEVAGLLGTDIADPDQKQKQKQSKD---------EK 68
Query: 56 RLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPT 115
RL + K K E E +E G N SF + + S P +KAI + + T
Sbjct: 69 RLQELTKPKVSNTSEAEADEPG-----------VNYSFEKADFSEPTMKAIKEMGFQKMT 117
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY----KPRDDQNTRVLVLVPT 171
+QA TIP L GRD+ G A TG+GKT AF+LP +E LLY KPR+ T V+++ PT
Sbjct: 118 KVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVE-LLYSLKIKPRN--GTAVIIITPT 174
Query: 172 RELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTP 231
REL +Q++ V RQL ++ S + +GG + + + + L K ++++ATPGRLLDHL NT
Sbjct: 175 RELALQIFGVARQLMEYHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQ 234
Query: 232 SFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSL 290
F +++ LV+DEADR+L+ F +MK+II+ L + RQTMLFSAT T V DL +SL
Sbjct: 235 GFVFLNLKALVIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKVEDLARISL 294
Query: 291 TRPVRVFVD 299
RP ++++
Sbjct: 295 -RPGPLYIN 302
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 147/256 (57%), Gaps = 10/256 (3%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EEN +F + + L +A L + PT IQ +PVAL GRD+ G A TG+GKTA+F L
Sbjct: 22 EENVTFKSLGVVDVLCEACEQLKWKAPTKIQREALPVALQGRDVIGLAETGSGKTASFAL 81
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 82 PILQALLETP---QRLFALVLTPTRELAFQISEQFEALGASIGVKSAVIVGGIDMMTQAL 138
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+ R
Sbjct: 139 TLAKKPHVIIATPGRLVDHLENTKGFNLKSLKYLVMDEADRILNMDFEEEVDKILRVIPR 198
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV----SFSNIDEVRL 323
R+T L+SATMT V L SL PV+V V + ++ L Q ++ F ++ V L
Sbjct: 199 ERRTYLYSATMTKKVQKLQRASLRDPVKVEVSSKYQTVEKLMQYYLFIPAKFKDVYLVHL 258
Query: 324 YNVLG---LMLLRENC 336
N L M+ C
Sbjct: 259 LNELAGNSFMVFCSTC 274
>gi|402885240|ref|XP_003906072.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Papio anubis]
Length = 406
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + PV EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG
Sbjct: 12 EASQPVMEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|301610486|ref|XP_002934777.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Xenopus (Silurana) tropicalis]
Length = 402
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F ++ ++ L + L + PT IQ IPVAL GRDI G A TG+GKT AF L
Sbjct: 16 EEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 76 PILQTLLESP---QRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSL 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 133 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 193 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYV 238
>gi|19354448|gb|AAH24730.1| Ddx27 protein [Mus musculus]
gi|148674546|gb|EDL06493.1| mCG14602, isoform CRA_a [Mus musculus]
Length = 292
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 126/195 (64%), Gaps = 21/195 (10%)
Query: 4 SDEEGNKEDKEDNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGKL 63
SD +G + ED GS+ D D+E D++ D+E+ L K L
Sbjct: 118 SDLKGQENPGEDEAGSK--DEDSETDYSSEDEEI-------------------LTKADTL 156
Query: 64 KQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIP 123
K E ++ ++ + FFEDA +++ SF MNLSRPLLKAI A+ + PTPIQ A IP
Sbjct: 157 KVKEKKKKKKGQAAGGFFEDASEYDKSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIP 216
Query: 124 VALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTR 183
V LLG+DIC CAATGTGKTAAF LP+LERL+YKPR TRVLVLVPTRELG+QV+ VT+
Sbjct: 217 VGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTK 276
Query: 184 QLAQFTSVEVALSVG 198
QLAQF S+ L+VG
Sbjct: 277 QLAQFCSITTCLAVG 291
>gi|398866146|ref|ZP_10621647.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
gi|398241657|gb|EJN27303.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
Length = 446
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMVAKVLNNPEHLQLNAVSQLNETTRQQIIT 223
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSATEAPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|419954928|ref|ZP_14471062.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri TS44]
gi|387968315|gb|EIK52606.1| ATP-dependent RNA helicase SrmB [Pseudomonas stutzeri TS44]
Length = 444
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 144/227 (63%), Gaps = 2/227 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PT +Q A IP AL G+D+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTAVQVAAIPPALEGKDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + AQFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRL++HL N + L D+E+L+LDEADRMLD FA ++ ++ C + +QT+
Sbjct: 122 PDVLIGTPGRLIEHL-NAGTLILKDVEILILDEADRMLDMGFAEDVQRLVGECGKRQQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
LFSAT A + ++ + L P+ + ++ E+ RQ+ ++ +I
Sbjct: 181 LFSATSGGAGLREMAAQVLREPLHLQLNRVSELNEGTRQQIITADDI 227
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE+ SF + ++ L +A L + PT IQ IPVAL GRDI G A TG+GKT AF L
Sbjct: 23 EESRSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFAL 82
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V + VGG++ Q
Sbjct: 83 PILQALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVHTTVIVGGIDAMSQSL 139
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 140 ALAKKPHVIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 199
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 200 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 245
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F ++ ++ L + L + PT IQ IPVAL GRDI G A TG+GKT AF L
Sbjct: 16 EEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 76 PILQTLLESP---QRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSL 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 133 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 193 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYV 238
>gi|401625423|gb|EJS43432.1| rrp3p [Saccharomyces arboricola H-6]
Length = 500
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 132/223 (59%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q+NL L++A LNY PTPIQ+ +IP AL G DI G A TG+GKTAAF +PIL
Sbjct: 81 TFSQLNLVPELIQACKNLNYSKPTPIQSKSIPPALKGHDIIGLAQTGSGKTAAFAIPILN 140
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + D + +L PTREL Q+ + L V VGG+ + Q L +
Sbjct: 141 RLWH---DQEPYYACILAPTRELAQQIKEAFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 197
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQ 270
P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ ++ R
Sbjct: 198 KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERT 257
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 258 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 300
>gi|41327776|ref|NP_957518.1| probable ATP-dependent RNA helicase DDX47 isoform 2 [Homo sapiens]
gi|119616689|gb|EAW96283.1| hCG27698, isoform CRA_c [Homo sapiens]
Length = 406
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|38566158|gb|AAH62498.1| ddx47-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 401
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F ++ ++ L + L + PT IQ IPVAL GRDI G A TG+GKT AF L
Sbjct: 15 EEQKTFRELGVTDVLCETCEQLGWKQPTKIQIEAIPVALQGRDIIGLAETGSGKTGAFAL 74
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 75 PILQTLLESP---QRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSL 131
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 132 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 191
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 192 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQFYV 237
>gi|401839240|gb|EJT42545.1| RRP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 404
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 141/247 (57%), Gaps = 15/247 (6%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
AE NEG E FE SF+++NL L++A LNY PTPIQ+ +IP AL
Sbjct: 71 AENDNANEG--ESFE---------SFNELNLVPELIQACKNLNYSKPTPIQSKSIPPALK 119
Query: 128 GRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQ 187
G DI G A TG+GKTAAF +PIL RL + D + +L PTREL Q+ + L
Sbjct: 120 GHDIIGLAQTGSGKTAAFAIPILNRLWH---DQEPYYACILAPTRELAQQIKEAFDSLGS 176
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
V VGG+ + Q L + P I+IATPGRL+DHL NT FSL ++ LV+DEAD
Sbjct: 177 LMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEAD 236
Query: 248 RMLDEHFASQMKEIIRLC-SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL 306
R+LD F + I+++ ++ R T LFSATMT ++ L SLT PV+ V N ++
Sbjct: 237 RLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVD 296
Query: 307 NLRQEFV 313
L Q +
Sbjct: 297 TLVQALM 303
>gi|302309551|ref|NP_986999.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|442570164|sp|Q74Z73.2|HAS1_ASHGO RecName: Full=ATP-dependent RNA helicase HAS1
gi|299788412|gb|AAS54823.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|374110250|gb|AEY99155.1| FAGR333Cp [Ashbya gossypii FDAG1]
Length = 504
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 140/215 (65%), Gaps = 7/215 (3%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---I 149
F ++NLS LKAIG + + T +QA TIP + GRD+ G A TG+GKT AF+LP +
Sbjct: 41 FDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEM 100
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + + L
Sbjct: 101 LHSLKFKPRN--GTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 158
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRT 268
K +++IATPGRLLDHL NT F +++ LV+DEADR+L+ F +MK+II+ L +
Sbjct: 159 AKGVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNED 218
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
RQ+MLFSAT T V DL +SL RP +F++ + E
Sbjct: 219 RQSMLFSATQTTKVEDLARISL-RPGPLFINVDSE 252
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 143/242 (59%), Gaps = 4/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
E+++ G+E A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EQHDSGEEL-RPAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMALQGRDI 63
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 64 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 120
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 121 QCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 180
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 181 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 240
Query: 312 FV 313
++
Sbjct: 241 YL 242
>gi|378949418|ref|YP_005206906.1| protein SrmB [Pseudomonas fluorescens F113]
gi|359759432|gb|AEV61511.1| SrmB [Pseudomonas fluorescens F113]
Length = 448
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECVNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 5/235 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ + L +A L Y PT IQ +IPVAL G+D+ G A TG+GKTAAF +PIL+
Sbjct: 83 SFKELGVMDSLCEACENLGYKNPTSIQVESIPVALEGKDLIGLAETGSGKTAAFAIPILQ 142
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P +L PTREL Q+ + L V A+ VGG+++ Q L K
Sbjct: 143 ALWDNP---TGLFACILAPTRELAFQISEQFEALGGGIGVRSAVIVGGMDMMTQSVALGK 199
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ +TR+T
Sbjct: 200 KPHILVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVIPQTRRT 259
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSNIDEVRLY 324
LFSATMT V L SL+ PVR+ V + + L Q+ F+ F + D +Y
Sbjct: 260 YLFSATMTSKVEKLQRASLSSPVRISVGSKYSTVSTLIQKFLFIPFKHKDTYLVY 314
>gi|398891184|ref|ZP_10644598.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
gi|398187211|gb|EJM74560.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
Length = 446
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|254236843|ref|ZP_04930166.1| hypothetical protein PACG_02863 [Pseudomonas aeruginosa C3719]
gi|126168774|gb|EAZ54285.1| hypothetical protein PACG_02863 [Pseudomonas aeruginosa C3719]
Length = 449
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 140/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V +V L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELF 235
>gi|423096700|ref|ZP_17084496.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q2-87]
gi|397887096|gb|EJL03579.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q2-87]
Length = 448
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 143/223 (64%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD F+ ++ ++ C+ +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVDECTNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|189205104|ref|XP_001938887.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985986|gb|EDU51474.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 517
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 146/252 (57%), Gaps = 10/252 (3%)
Query: 68 AEEYEENEGGKEFFEDAPPV-----EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATI 122
AE+ ++ + E+A P E +F + + L A L + PTPIQ I
Sbjct: 59 AEKDQDKSSAPDAEEEAEPATTGADEVKKTFADLGVREELCDACENLKFKNPTPIQTQAI 118
Query: 123 PVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVT 182
P+AL GRD+ G A TG+GKTAAF+LPIL+ LL KP Q L+L PTREL Q+ Q
Sbjct: 119 PLALEGRDVIGLAETGSGKTAAFVLPILQSLLEKP---QPLFGLILAPTRELAYQIAQQV 175
Query: 183 RQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
L +V+ A VGG+++ Q L K P IV+ATPGRLLDHL NT FSL ++ +V
Sbjct: 176 DALGSIINVKCATLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENTKGFSLKHLKYMV 235
Query: 243 LDEADRMLDEHFASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV-DN 300
LDEADR+LD F + +I+++ R R T LFSATM+ V L +L PVRV + +
Sbjct: 236 LDEADRLLDLDFGPVLDKILKVLPREGRHTYLFSATMSSKVESLQRAALQNPVRVSISSS 295
Query: 301 NHEVALNLRQEF 312
+H+V L Q +
Sbjct: 296 SHQVVSTLLQRY 307
>gi|398925961|ref|ZP_10662200.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
gi|398171555|gb|EJM59457.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
Length = 446
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 158/285 (55%), Gaps = 11/285 (3%)
Query: 60 EGKLKQVEAEEYEE-NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQ 118
E + +V++E+ +E G E AP ++ ++ + L+ L +A L + P+ IQ
Sbjct: 37 ENDVNEVDSEDEDEPAASGSESDTAAPTEDQKLTWKDLGLNDTLCQACDELKWKAPSKIQ 96
Query: 119 AATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQV 178
IPVAL G+D+ G A TG+GKT AF LPIL LL P Q LVL PTREL Q+
Sbjct: 97 REAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESP---QRYFALVLTPTRELAFQI 153
Query: 179 YQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDI 238
+ L ++ + VGG+++ Q L K P I+IATPGRL+DHL N F+L I
Sbjct: 154 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAI 213
Query: 239 EVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ LV+DEADR+L+ F ++ +I+++ R R+T LFSATMT V L SL PV+V V
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEV 273
Query: 299 DNNHEVALNLRQEF----VSFSNIDEVRLYNVLG---LMLLRENC 336
N ++ L+Q + V + ++ V + N L M+ C
Sbjct: 274 SNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTC 318
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 158/285 (55%), Gaps = 11/285 (3%)
Query: 60 EGKLKQVEAEEYEE-NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQ 118
E + +V++E+ +E G E AP ++ ++ + L+ L +A L + P+ IQ
Sbjct: 37 ENDVNEVDSEDEDEPAASGSESDTAAPTEDQKLTWKDLGLNDTLCQACDELKWKAPSKIQ 96
Query: 119 AATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQV 178
IPVAL G+D+ G A TG+GKT AF LPIL LL P Q LVL PTREL Q+
Sbjct: 97 REAIPVALQGKDVIGLAETGSGKTGAFALPILHALLESP---QRYFALVLTPTRELAFQI 153
Query: 179 YQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDI 238
+ L ++ + VGG+++ Q L K P I+IATPGRL+DHL N F+L I
Sbjct: 154 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAI 213
Query: 239 EVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ LV+DEADR+L+ F ++ +I+++ R R+T LFSATMT V L SL PV+V V
Sbjct: 214 KYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEV 273
Query: 299 DNNHEVALNLRQEF----VSFSNIDEVRLYNVLG---LMLLRENC 336
N ++ L+Q + V + ++ V + N L M+ C
Sbjct: 274 SNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTC 318
>gi|366994708|ref|XP_003677118.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
gi|342302986|emb|CCC70763.1| hypothetical protein NCAS_0F02790 [Naumovozyma castellii CBS 4309]
Length = 502
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 134/233 (57%), Gaps = 4/233 (1%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED E SF +++L LL+A LNY PTPIQ+ +IP AL G DI G A TG+GK
Sbjct: 73 EDETEHETFESFSELDLVPELLQACKNLNYTKPTPIQSRSIPPALKGNDIIGLAQTGSGK 132
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
TAAF +PIL L + D Q +L PTREL Q+ + L V VGG+
Sbjct: 133 TAAFAIPILNSLWH---DQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMN 189
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I
Sbjct: 190 MMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKYLVMDEADRLLDMEFGPVLDRI 249
Query: 262 IR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ L ++ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 250 LKILPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLI 302
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 150/259 (57%), Gaps = 13/259 (5%)
Query: 88 EENS---SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
EEN+ ++ + + L KA L + PT IQ +IP+ L G+DI G A TG+GKTAA
Sbjct: 12 EENANEMTWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTLQGKDIIGLAETGSGKTAA 71
Query: 145 FMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
F LPIL+ LL P Q L+L PTREL Q+ + L V+ A+ VGG+++
Sbjct: 72 FALPILQALLENP---QRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMS 128
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q +L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+
Sbjct: 129 QALILAKKPHILIATPGRLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDE 320
R R+T+LFSATMT V L SL PV+V V ++ L+Q + V F ++
Sbjct: 189 IPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYL 248
Query: 321 VRLYNVLG---LMLLRENC 336
V + N L M+ C
Sbjct: 249 VHILNELAGNSFMIFCATC 267
>gi|354543386|emb|CCE40105.1| hypothetical protein CPAR2_101430 [Candida parapsilosis]
Length = 578
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 180/304 (59%), Gaps = 26/304 (8%)
Query: 11 EDKEDNEGSEEDDVDAEEDFALPDDEMKH------DNIKNRQ-KLIGKKK---QKRLAKE 60
E + D++ E D+D E+ DDE NI++ + K + KK+ +KRL +
Sbjct: 29 ESESDSDSENEVDIDTEKAVDQLDDEFDEVAGLLGQNIQDPEAKAVNKKQAKDEKRLQEL 88
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
K K V++ + + E ++N SF + + S P +KAI + + T +QA
Sbjct: 89 TKAKVVDSSNNDNVDDDDE-------SKDNYSFEKADFSEPTMKAIREMGFTKMTKVQAK 141
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLY----KPRDDQNTRVLVLVPTRELGV 176
TIP L GRD+ G A TG+GKT AF++P +E L+Y KPR+ T V+++ PTREL +
Sbjct: 142 TIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE-LMYSLKIKPRN--GTAVIIITPTRELAL 198
Query: 177 QVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLS 236
Q++ V RQL + S + +GG + + + + L K ++++ATPGRLLDHL NT F S
Sbjct: 199 QIFGVARQLMEHHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQGFVFS 258
Query: 237 DIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++ L++DEADR+L+ F +MK+II+ L + RQTMLFSAT T V DL +SL RP
Sbjct: 259 NLKALIIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKVEDLARISL-RPGP 317
Query: 296 VFVD 299
++++
Sbjct: 318 LYIN 321
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSPTEVPQPAVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|421178877|ref|ZP_15636479.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa E2]
gi|404547823|gb|EKA56806.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa E2]
Length = 449
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 140/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V +V L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELF 235
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED E+ ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GK
Sbjct: 56 EDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGK 115
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG++
Sbjct: 116 TGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 172
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I
Sbjct: 173 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 232
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+++ R R+T LFSATMT V L SL PV+V V N ++ L+Q + V + +
Sbjct: 233 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 292
Query: 318 IDEVRLYNVLG---LMLLRENC 336
+ V + N L M+ C
Sbjct: 293 VYLVHILNELAGNSFMIFCSTC 314
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 135/222 (60%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + ++ L + L + PT IQ IPVAL G+DI G A TG+GKT AF +PIL+
Sbjct: 20 TFKDLGVTDVLCETCETLKWKTPTKIQKEAIPVALQGKDIIGLAETGSGKTGAFAIPILQ 79
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q +L K
Sbjct: 80 ALLENP---QRYFALILTPTRELAFQISEQIEALGSSIGVKCAVIVGGMDMMAQSLMLAK 136
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I+IATPGRL+DHL NT FSL +++VLV+DEADR+L+ F ++ +I+++ R R+T
Sbjct: 137 KPHIIIATPGRLVDHLENTKGFSLRNLKVLVMDEADRILNMDFEEEVDKILKVIPRERRT 196
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L SL PVRV V + L+Q ++
Sbjct: 197 FLFSATMTKKVQKLHRASLVDPVRVEVSTKFQTVEQLQQYYI 238
>gi|390167359|ref|ZP_10219350.1| putative helicase [Sphingobium indicum B90A]
gi|389590061|gb|EIM68066.1| putative helicase [Sphingobium indicum B90A]
Length = 461
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L+ P+L+A+ A Y PTPIQA IPV L G+D+CG A TGTGKTAAF LP L+
Sbjct: 3 FTDLGLAEPILRALAAKKYGSPTPIQAQAIPVLLKGKDLCGIAQTGTGKTAAFALPSLDH 62
Query: 153 LLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
P+ Q R+LVL PTREL Q+ Q R +F + V + GG+ + Q L
Sbjct: 63 FARNPKPTPLQGCRMLVLSPTRELAAQIAQSFRDYGRFLKLSVEVVFGGVPINRQIRALG 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DIV+ATPGRLLD L + +F++ D E+ VLDEAD+M+D F +K I +L + RQ
Sbjct: 123 RGVDIVVATPGRLLD-LIDQRAFTIKDTEIFVLDEADQMMDMGFIHPLKRIAKLLPKERQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNV 326
+ FSATM + L S L PV+V V A +RQ+ + +++ L N+
Sbjct: 182 NLFFSATMPGEIEALASQFLHDPVKVSVAPQSTTAERVRQQATFVNQMEKQALLNL 237
>gi|349578615|dbj|GAA23780.1| K7_Rrp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 501
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 78 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 137
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 138 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 194
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P IVIATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 195 DLMRKPHIVIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 254
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 255 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 301
>gi|156837514|ref|XP_001642781.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160358661|sp|A7TS37.1|RRP3_VANPO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|156113348|gb|EDO14923.1| hypothetical protein Kpol_1005p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 506
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 132/223 (59%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++L L++A LN+ PTPIQA +IP AL G DI G A TG+GKTAAF +PIL
Sbjct: 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILN 146
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + D Q +L PTREL Q+ + L V A VGG+ + Q L +
Sbjct: 147 RLWH---DQQPYYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMMDQARDLMR 203
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQ 270
P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ ++ R
Sbjct: 204 KPHIIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQGRT 263
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 264 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLI 306
>gi|383854020|ref|XP_003702520.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Megachile rotundata]
Length = 404
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 140/229 (61%), Gaps = 6/229 (2%)
Query: 88 EENS---SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
EEN+ ++ + + L KA L + PT IQ +IP+ L G+DI G A TG+GKTAA
Sbjct: 12 EENANEMTWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTLQGKDIIGLAETGSGKTAA 71
Query: 145 FMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
F LPIL+ LL P Q L+L PTREL Q+ + L V+ A+ VGG+++
Sbjct: 72 FALPILQALLENP---QRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMS 128
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q +L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+
Sbjct: 129 QALILAKKPHILIATPGRLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRV 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R R+T+LFSATMT V L SL PV+V V ++ L+Q ++
Sbjct: 189 IPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYI 237
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 3/218 (1%)
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
+ L PLLKA+ +N+ PT IQ+ +P ALLGRDI G A TG+GKTAAF LPIL++L
Sbjct: 20 LGLIDPLLKALDQVNFKQPTEIQSQALPSALLGRDIIGVAETGSGKTAAFALPILQKLWE 79
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
+P+ +L PTREL Q+ Q L V + VGG++ Q L K P I
Sbjct: 80 EPK---GLFACILAPTRELAYQISQQFESLGSAMGVRCLVLVGGVDRMPQAVALAKRPHI 136
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
++ATPGRL DHL NT FSL ++ LVLDEADR+LD F + +I+++ + R T LFS
Sbjct: 137 IVATPGRLNDHLQNTKGFSLRSLKFLVLDEADRLLDMDFGPDIDQILKVIPKERTTYLFS 196
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
ATMT V L SL+ PVRV V + ++ L Q ++
Sbjct: 197 ATMTTKVAKLQRASLSNPVRVEVSSKYQTVSTLLQYYL 234
>gi|308808320|ref|XP_003081470.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
gi|116059933|emb|CAL55992.1| ATP-dependent RNA helicase (ISS), partial [Ostreococcus tauri]
Length = 777
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 160/279 (57%), Gaps = 12/279 (4%)
Query: 34 DDEMKHDNIKNRQKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVE---EN 90
D+ K K R+ G + + AK K K VE + + G E E + +
Sbjct: 108 DETTKKRAKKGRRTSEGDGEGGKRAK--KTKAVEGAGEDGTDAGVEGLESVGRTDGILSD 165
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F + LS P ++ I ++ + T +QA +P L G+D+ G A TG+GKT AF++P
Sbjct: 166 ATFASLELSAPTMRGIESMGFTTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFLVPSA 225
Query: 151 ERLLYK----PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
E LLY PR+ T V+VL PTREL +Q+Y V +QL + S L +GG + +
Sbjct: 226 E-LLYHAKFMPRN--GTGVMVLSPTRELALQIYNVAQQLMEKHSQTHGLIIGGANRRAEA 282
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K ++++ATPGRLLDH+ NT F+ S ++V V+DEADRMLD F +M+ I+++
Sbjct: 283 ERLIKGVNLLVATPGRLLDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLP 342
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
+ RQTMLFSAT T V DL +SL P+ + VD++ V+
Sbjct: 343 KERQTMLFSATQTTKVEDLARLSLKSPIYIGVDDSRAVS 381
>gi|67624705|ref|XP_668635.1| DEAD box protein [Cryptosporidium hominis TU502]
gi|54659844|gb|EAL38406.1| DEAD box protein [Cryptosporidium hominis]
Length = 441
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 146/245 (59%), Gaps = 14/245 (5%)
Query: 79 EFFED-APPVEENS--------SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
EF E A + EN +F + + + L A +L + PT IQ TIPVAL GR
Sbjct: 7 EFLESHASKIAENVEEESSESVTFASLGVCKELCIACESLGWKTPTEIQKKTIPVALEGR 66
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQ-NTRVLVLVPTRELGVQVYQVTRQLAQF 188
DI G A TG+GKT +F++PIL+RLL DDQ ++L PTREL VQ+ +
Sbjct: 67 DIIGLAETGSGKTGSFIIPILQRLL----DDQVPMYAVILAPTRELCVQISEQFSAFGSL 122
Query: 189 TSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADR 248
S+++A VGGL++ +Q L K P I++A+PGRL+DHL NT F++ I+ LV+DEADR
Sbjct: 123 ISLKIATLVGGLDMVMQSLSLAKKPHIIVASPGRLVDHLENTKGFNIGGIKFLVMDEADR 182
Query: 249 MLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNL 308
+L F + +I+ + R T LFSATMT V L +SL+ P+++ V+ ++ A NL
Sbjct: 183 LLSMDFEIALNKIVESSPKNRTTYLFSATMTTKVAKLQKISLSNPIKICVNTKYDTAANL 242
Query: 309 RQEFV 313
Q ++
Sbjct: 243 MQYYM 247
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 4/225 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F ++ + L +A + Y PTPIQ +IP+AL GRD+ G A TG+GKTAAF LPI
Sbjct: 47 SKTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPI 106
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L+ L+ KP Q LVL PTREL Q+ + L V + VGG+++ Q L
Sbjct: 107 LQALMEKP---QPFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISL 163
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
K P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R
Sbjct: 164 GKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRER 223
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+T LFSATM+ V L SL+ P+RV V + ++ L Q ++
Sbjct: 224 RTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYL 268
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L +A LN+ PT +Q IP+AL GRD+ G A TG+GKTAAF LPIL+ LL P Q
Sbjct: 73 LCEACKQLNWTDPTKVQIEAIPLALQGRDVIGLAETGSGKTAAFALPILQALLEHP---Q 129
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
LVL PTREL Q+ + L ++VA+ VGG+++ Q L K P +++ATPG
Sbjct: 130 RLFALVLTPTRELAYQIAEQFEALGACIGIKVAVIVGGVDMVTQALCLAKKPHVIVATPG 189
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RL+DHL NT FSL ++ LV+DEADR+LD F S++ +I+++ R R+T LFSATMT
Sbjct: 190 RLVDHLENTKGFSLRSLKYLVMDEADRILDMDFESEVNKILQVIPRERKTYLFSATMTKK 249
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
V L SL PV+V V + ++ L+Q ++
Sbjct: 250 VTKLQRASLQDPVKVEVSSKYQTVDKLQQHYI 281
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 137/232 (59%), Gaps = 8/232 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED P +F + ++ L +A L + PT IQ +PVAL G+D+ G A TG+GK
Sbjct: 34 EDTP-----KTFKDLGVTEVLCEACDQLGWKSPTKIQIEAVPVALQGKDVIGLAETGSGK 88
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG++
Sbjct: 89 TGAFALPILQSLLASP---QRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGID 145
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q VL K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I
Sbjct: 146 MMSQSLVLAKKPHIVIATPGRLIDHLENTKGFTLRALKFLVMDEADRILNMDFETEVDKI 205
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+++ R R+T LFSATMT V L +L PV+ V + L+Q ++
Sbjct: 206 LKVIPRERRTFLFSATMTKKVQKLQRAALKDPVKCAVSTKYSTVDKLQQYYI 257
>gi|395538709|ref|XP_003771317.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Sarcophilus harrisii]
Length = 411
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 3/227 (1%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
V+E +F + ++ L A L + PT IQ IP+AL GRDI G A TG+GKT AF
Sbjct: 21 VQETKTFKDLGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGRDIIGLAETGSGKTGAFA 80
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
LPIL LL P Q LVL PTREL Q+ + L VE A+ VGG++ Q
Sbjct: 81 LPILNALLETP---QRFFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQS 137
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I++L
Sbjct: 138 LALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKLIP 197
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 244
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 4/225 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F ++ + L +A + Y PTPIQ +IP+AL GRD+ G A TG+GKTAAF LPI
Sbjct: 47 SKTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPI 106
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L+ L+ KP Q LVL PTREL Q+ + L V + VGG+++ Q L
Sbjct: 107 LQALMEKP---QPFFGLVLAPTRELAYQISKSFESLGASMGVRSCVIVGGMDMVSQSISL 163
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
K P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R
Sbjct: 164 GKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRER 223
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
+T LFSATM+ V L SL+ P+RV V + ++ L Q ++
Sbjct: 224 RTFLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYL 268
>gi|77457664|ref|YP_347169.1| DEAD/DEAH box helicase-like protein [Pseudomonas fluorescens Pf0-1]
gi|77381667|gb|ABA73180.1| ATP-dependent RNA helicase [Pseudomonas fluorescens Pf0-1]
Length = 446
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD FA ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNDTTRQQIIT 223
>gi|386057057|ref|YP_005973579.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa M18]
gi|347303363|gb|AEO73477.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa M18]
Length = 449
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 140/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V +V L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKVELF 235
>gi|27545287|ref|NP_775375.1| ATP-dependent RNA helicase DDX54 [Danio rerio]
gi|20977591|gb|AAM28223.1| ATP-dependent RNA helicase [Danio rerio]
Length = 862
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 137/228 (60%), Gaps = 2/228 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K I Y PTPIQ TIPV L G+D+ A TG+GKTAAF++
Sbjct: 75 KKSGGFQSMGLSYPVYKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLV 134
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ E+ L P+ R L+L PTREL +Q + T++L +FT + AL +GG + Q +
Sbjct: 135 PLFEK-LKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFA 193
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L +E +V DEADR+ + FA Q++EIIR
Sbjct: 194 ALHENPDIIIGTPGRLM-HVIQEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPD 252
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
RQT+LFSAT+ + + LT PV + +D + +++ L+ F S
Sbjct: 253 ARQTLLFSATLPKLIVEFARAGLTEPVLIRLDVDTKLSEQLKLSFFSL 300
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSPTEAPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
+V
Sbjct: 242 YV 243
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED E+ ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GK
Sbjct: 56 EDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGK 115
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG++
Sbjct: 116 TGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 172
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I
Sbjct: 173 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 232
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+++ R R+T LFSATMT V L SL PV++ V N ++ L+Q + V + +
Sbjct: 233 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKIEVSNKYQTVEQLQQSYLFIPVKYKD 292
Query: 318 IDEVRLYNVLG---LMLLRENC 336
+ V + N L M+ C
Sbjct: 293 VYLVHILNELAGNSFMIFCSTC 314
>gi|160358662|sp|A6ZSX1.1|RRP3_YEAS7 RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|151944009|gb|EDN62302.1| ribosomal RNA processing protein [Saccharomyces cerevisiae YJM789]
gi|190405848|gb|EDV09115.1| weak RNA-dependent ATPase activity which is not specific for rRNA
[Saccharomyces cerevisiae RM11-1a]
gi|256270568|gb|EEU05749.1| Rrp3p [Saccharomyces cerevisiae JAY291]
gi|323333235|gb|EGA74633.1| Rrp3p [Saccharomyces cerevisiae AWRI796]
Length = 501
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 78 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 137
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 138 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 194
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 195 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 254
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 255 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 301
>gi|259146813|emb|CAY80069.1| Rrp3p [Saccharomyces cerevisiae EC1118]
gi|365765178|gb|EHN06690.1| Rrp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 501
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 78 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 137
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 138 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 194
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 195 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 254
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 255 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 301
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 154/263 (58%), Gaps = 5/263 (1%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
E E+ ENE D E+ ++F ++ + L +A AL + P+ IQ IPVAL
Sbjct: 6 EDEDRLENEPKTTQGNDPDDGEDKTTFKELGVVDVLCEACEALKWRTPSKIQKEAIPVAL 65
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLA 186
GRDI G A TG+GKTAAF LPIL+ LL P L+L PTREL Q+ + L
Sbjct: 66 QGRDIIGLAETGSGKTAAFALPILQALLENP---ARLFALILTPTRELAFQISEQFEALG 122
Query: 187 QFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEA 246
++ A+ VGG+++ Q +L K P +VIATPGRL+DHL NT F+L ++ LV+DEA
Sbjct: 123 STIGIKSAVIVGGIDMMTQAMMLAKKPHVVIATPGRLIDHLENTKGFTLKNLRYLVMDEA 182
Query: 247 DRMLDEHFASQMKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
DR+L+ F ++ +I+++ R R+T L+SATMT V L SLT PVRV V ++
Sbjct: 183 DRILNMDFEEEVDKILKVIPRENRRTYLYSATMTKKVAKLQRASLTDPVRVEVSTKYQTV 242
Query: 306 LNLRQEFVSF-SNIDEVRLYNVL 327
L+Q ++ + EV L ++L
Sbjct: 243 DKLQQYYLFIPAKYKEVHLVHLL 265
>gi|344939864|ref|ZP_08779152.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
gi|344261056|gb|EGW21327.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
Length = 441
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 135/223 (60%), Gaps = 10/223 (4%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ LLKA+ Y+ PTP+Q IP+ L G+D+ A TGTGKTA+F LP+L+
Sbjct: 2 SFAQLGLADELLKAVADQGYVTPTPVQQKAIPLILEGKDVLAGAQTGTGKTASFTLPLLQ 61
Query: 152 RLL------YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
RL KPR R L+LVPTREL QVY+ + VGG + +Q
Sbjct: 62 RLAENHDPHQKPR---RVRALILVPTRELAAQVYESVKTYGAHLPFHAEAVVGGASIGIQ 118
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
LR+ DIV+ATPGRL+DH+ + +LS++EVLVLDEADRMLD F +K+++ L
Sbjct: 119 TRQLRRGCDIVVATPGRLIDHVQQR-NINLSNVEVLVLDEADRMLDMGFLPDIKQLMALI 177
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNL 308
+ RQ++LFSAT+ +A+ L + L PV V V + A N+
Sbjct: 178 PKKRQSLLFSATVPNAIKSLAAQLLNNPVEVEVAKQNATAENV 220
>gi|323354635|gb|EGA86470.1| Rrp3p [Saccharomyces cerevisiae VL3]
Length = 501
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 78 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 137
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 138 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 194
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 195 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 254
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 255 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 301
>gi|37362659|ref|NP_011932.2| RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|81175193|sp|P38712.2|RRP3_YEAST RecName: Full=ATP-dependent rRNA helicase RRP3; AltName:
Full=Ribosomal RNA-processing protein 3
gi|285809971|tpg|DAA06758.1| TPA: RNA-dependent ATPase RRP3 [Saccharomyces cerevisiae S288c]
gi|392298867|gb|EIW09962.1| Rrp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 501
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 78 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 137
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 138 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 194
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 195 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 254
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 255 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 301
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + PV EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG
Sbjct: 12 EASQPVMEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + PV EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG
Sbjct: 12 EASQPVMEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|409397522|ref|ZP_11248389.1| ATP-dependent RNA helicase SrmB [Pseudomonas sp. Chol1]
gi|409117977|gb|EKM94402.1| ATP-dependent RNA helicase SrmB [Pseudomonas sp. Chol1]
Length = 444
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 145/227 (63%), Gaps = 2/227 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PT +Q A IP AL G+D+ A TG+GKTAAF+LP+L R
Sbjct: 2 FDQFALHERLLKAVAELKFVEPTAVQVAAIPPALEGKDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + R L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRL++HL N + L D+E+L+LDEADRMLD FA ++ ++ C++ +QT+
Sbjct: 122 PDVLIGTPGRLIEHL-NAGTLILKDVEILILDEADRMLDMGFAEDVQRLVGECAKRQQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
LFSAT A + ++ + L P+ + ++ E+ RQ+ ++ +I
Sbjct: 181 LFSATSGGASLREMAAQVLREPLHLQLNRVSELNEGTRQQIITADDI 227
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 138/235 (58%), Gaps = 8/235 (3%)
Query: 84 APPVEE----NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
AP EE +F + + L +A L Y PTPIQ +IP+AL RDI G A TG+
Sbjct: 79 APEQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGS 138
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF LPIL+ LL KP LVL PTREL Q+ Q L S+ AL +GG
Sbjct: 139 GKTAAFALPILQALLDKP---APLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGG 195
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+++ Q L K P +++ATPGRLLDHL T FSL ++ LV+DEADR+LD F ++
Sbjct: 196 MDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILE 255
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN-LRQEFV 313
+I++ R R+T LFSATM+ V L SL P++V V +N ++ L+ +V
Sbjct: 256 KILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVSTLKSNYV 310
>gi|323308818|gb|EGA62055.1| Rrp3p [Saccharomyces cerevisiae FostersO]
Length = 501
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 131/223 (58%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +PIL
Sbjct: 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + D + +L PTREL Q+ + L V VGG+ + Q L +
Sbjct: 142 RLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 198
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQ 270
P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ ++ R
Sbjct: 199 KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERT 258
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 259 TYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 301
>gi|315645365|ref|ZP_07898490.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315279407|gb|EFU42713.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 506
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +N+S +LKA+ NY PTPIQA IP L GRD+ GCA TGTGKTAAF +P+++
Sbjct: 18 TFQDLNISPVILKALAKENYKEPTPIQAQAIPAVLAGRDLLGCAQTGTGKTAAFSVPMIQ 77
Query: 152 RL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L KP + R LVL PTREL +Q+ + +QFT + VGG+ K QE
Sbjct: 78 LLNEQPPKPGMARRIRALVLSPTRELALQISDNVKAYSQFTKLRSTAIVGGVSQKTQERA 137
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L++ DI+IATPGRLLD L N L +E+LVLDEADRMLD F +K II
Sbjct: 138 LQQGADILIATPGRLLD-LMNQKRIDLQHVEILVLDEADRMLDMGFIHDVKRIISKMPSK 196
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+QT+ FSATM + LV L PV+V + A ++Q
Sbjct: 197 KQTLFFSATMPAEITQLVKTLLQNPVKVEITPVSSTAERIKQ 238
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 138/235 (58%), Gaps = 8/235 (3%)
Query: 84 APPVEE----NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
AP EE +F + + L +A L Y PTPIQ +IP+AL RDI G A TG+
Sbjct: 79 APEQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGS 138
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF LPIL+ LL KP LVL PTREL Q+ Q L S+ AL +GG
Sbjct: 139 GKTAAFALPILQALLDKP---APLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGG 195
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+++ Q L K P +++ATPGRLLDHL T FSL ++ LV+DEADR+LD F ++
Sbjct: 196 MDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILE 255
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN-LRQEFV 313
+I++ R R+T LFSATM+ V L SL P++V V +N ++ L+ +V
Sbjct: 256 KILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVSTLKSNYV 310
>gi|325191409|emb|CCA26186.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 463
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 133/224 (59%), Gaps = 3/224 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F Q+ + L +AI +L + P+ IQ IP L GRD+ G A TG+GKT AF++PI
Sbjct: 28 DQTFEQLGVDATLCEAIASLGWSKPSKIQQEAIPHGLAGRDLIGLAETGSGKTGAFVIPI 87
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L+ LL P Q LVL PTREL Q+ + L ++ A VGG+++ Q+ L
Sbjct: 88 LQSLLRSP---QRLYALVLAPTRELAYQISEQFEALGASIGLKCACVVGGIDMMNQQIAL 144
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+ P I+IATPGRL+DHL NT FSL I+ LVLDEADRML F ++ +I++L R
Sbjct: 145 ARKPHIIIATPGRLVDHLENTKGFSLRTIKFLVLDEADRMLSMDFEEEINQIVQLMPSER 204
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT V L SL P+++ + + NLRQ ++
Sbjct: 205 NTYLFSATMTSKVAKLQRASLLNPIKIEITHKFATPENLRQHYL 248
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + P+ EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG
Sbjct: 12 ETSQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 243
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|73997169|ref|XP_866840.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Canis lupus familiaris]
Length = 407
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSPAEEPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|409422710|ref|ZP_11259795.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas sp.
HYS]
Length = 441
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 139/223 (62%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + R LVL+PTREL Q + + +QFT ++ L GG + K Q ++LRK
Sbjct: 62 LVDLKQKRVEIRALVLLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKEQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PD++I TPGRLL+ L N + L ++V+VLDEADRMLD FA ++ + C QTM
Sbjct: 122 PDVLIGTPGRLLEQL-NAGNLHLEHVQVIVLDEADRMLDMGFAEDVERLCNECPNREQTM 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A + D++ L P + +++ ++A RQ+ ++
Sbjct: 181 LFSATTGGAGLRDMIGKVLKTPEHLMLNSVSQLAEGTRQQIIT 223
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 16 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 76 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 133 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 193 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 238
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|398855606|ref|ZP_10612087.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
gi|398230573|gb|EJN16591.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
Length = 446
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 142/223 (63%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGR+++ L N + L ++EVLVLDEADRMLD F+ ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRMIEQL-NAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVDECPNRQQTM 180
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIIT 223
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQTAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKDPVKCAVSSKYQTVEKLQQYYI 243
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 134/223 (60%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L A L Y PTPIQ IP+AL RDI G A TG+GKTAAF LPIL+
Sbjct: 66 TFRDLGIVDSLCDACERLGYKNPTPIQQEAIPLALQNRDIIGIAETGSGKTAAFALPILQ 125
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q LVL PTREL Q+ Q L S+ AL +GGL++ Q L K
Sbjct: 126 ALLDKP---QPLFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGLDMVQQAIALGK 182
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +V+ATPGRLLDHL T FSL +++ LV+DEADR+LD F +++I++ R R+T
Sbjct: 183 KPHVVVATPGRLLDHLEKTKGFSLRNLKFLVMDEADRLLDMDFGPILEKILKFLPRERRT 242
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL P++V + ++ ++ L Q ++
Sbjct: 243 FLFSATMSSKVESLQRASLRDPLKVSISSSKYQTVSTLVQNYI 285
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + P+ EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG
Sbjct: 12 ETSQPIVEKEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|487961|gb|AAB68392.1| Yhr065cp [Saccharomyces cerevisiae]
Length = 543
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 120 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 179
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 180 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 236
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 237 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 296
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 297 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 343
>gi|323348235|gb|EGA82484.1| Rrp3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 543
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 120 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 179
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 180 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 236
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 237 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 296
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 297 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 343
>gi|323304679|gb|EGA58441.1| Rrp3p [Saccharomyces cerevisiae FostersB]
Length = 543
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 120 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 179
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 180 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 236
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 237 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 296
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 297 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 343
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 135/227 (59%), Gaps = 3/227 (1%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
V+E +F + ++ L A L + PT IQ IP+AL GRDI G A TG+GKT AF
Sbjct: 21 VQETKTFKDLGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGRDIIGLAETGSGKTGAFA 80
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
LPIL LL P Q LVL PTREL Q+ + L VE A+ VGG++ Q
Sbjct: 81 LPILNALLETP---QRFFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQS 137
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I++L
Sbjct: 138 LALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKLIP 197
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 244
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED E+ ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GK
Sbjct: 52 EDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGK 111
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG++
Sbjct: 112 TGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 168
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I
Sbjct: 169 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 228
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+++ R R+T LFSATMT V L SL PV+V V N ++ L+Q + V + +
Sbjct: 229 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 288
Query: 318 IDEVRLYNVLG---LMLLRENC 336
+ V + N L M+ C
Sbjct: 289 VYLVHILNELAGNSFMIFCSTC 310
>gi|50295040|ref|XP_449931.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608117|sp|Q6FIL3.1|HAS1_CANGA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49529245|emb|CAG62911.1| unnamed protein product [Candida glabrata]
Length = 494
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 148/232 (63%), Gaps = 11/232 (4%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP- 148
+ SF +NLS+P ++AI + + TP+QA TIP + GRD+ G A TG+GKT AF+LP
Sbjct: 28 DHSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPT 87
Query: 149 --ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+L L +KPR+ T V+++ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 88 IELLHSLKFKPRN--GTGVIIITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEA 145
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LC 265
L K ++++ATPGRLLDHL NT F +++ LV+DEADR+L+ F +M++II+ L
Sbjct: 146 EKLMKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILP 205
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEFV 313
+ RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +V
Sbjct: 206 NEDRQSMLFSATQTTKVEDLSRISL-RPGPLFINVVSEHDSSTADGLEQGYV 256
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 6/262 (2%)
Query: 59 KEGKLKQVEAEEYEENEGGKEFFEDA--PPVE-ENSSFHQMNLSRPLLKAIGALNYIYPT 115
K+ LKQ EE + E E F+ P E + SF+++ L LL+AI + + PT
Sbjct: 30 KKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFKSFNELKLIPELLEAIQQMKFTKPT 89
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELG 175
PIQ+ IP AL G+DI G A TG+GKTAAF +PIL+ L LVL PTREL
Sbjct: 90 PIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALW---EAQAAYYGLVLAPTRELA 146
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
Q+ + L + VGG+++ Q L + P I++ATPGR++DHL +T FSL
Sbjct: 147 YQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLEHTKGFSL 206
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++ LV+DEADR+LD F + +I+++ R T LFSATMT+ + L SL PVR
Sbjct: 207 KNLKYLVMDEADRLLDMDFGPALDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVR 266
Query: 296 VFVDNNHEVALNLRQEFVSFSN 317
V V N ++ A NL Q + S+
Sbjct: 267 VAVSNKYQTADNLVQSMMLVSD 288
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED E+ ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GK
Sbjct: 52 EDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGK 111
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG++
Sbjct: 112 TGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 168
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I
Sbjct: 169 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 228
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+++ R R+T LFSATMT V L SL PV+V V N ++ L+Q + V + +
Sbjct: 229 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 288
Query: 318 IDEVRLYNVLG---LMLLRENC 336
+ V + N L M+ C
Sbjct: 289 VYLVHILNELAGNSFMIFCSTC 310
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EEAKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|429334948|ref|ZP_19215595.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida CSV86]
gi|428760355|gb|EKX82622.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
putida CSV86]
Length = 439
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 140/223 (62%), Gaps = 2/223 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F L LLKA+ ALN++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSDFALHERLLKAVAALNFVEPTPVQAAAIPLALQGRDLRVTAKTGSGKTAAFVLPVLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + R L+L+PTREL Q + + AQFT ++ + GG + K Q ++LRK
Sbjct: 62 LVDLNQKRVEIRALILLPTRELAQQTLKEIERFAQFTFIKSGIITGGEDFKEQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI++ TPGR+L+HL N + L ++V+VLDEADRMLD FA ++ + LC QT+
Sbjct: 122 PDILVGTPGRMLEHL-NAGNLDLEHVQVVVLDEADRMLDMGFAEDVERLCGLCPNRAQTL 180
Query: 273 LFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT A + D++ L P + ++ ++ RQ+ ++
Sbjct: 181 LFSATTGGAGLRDMIGKVLKDPEHLMLNAVSQLNETTRQQIIT 223
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ L L +A + Y PTPIQ+ +IP+AL GRDI G A TG+GKTA+F+LPIL+
Sbjct: 73 TFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGSGKTASFVLPILQ 132
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q LV+ PTREL Q+ L +V VGG+++ Q L K
Sbjct: 133 ALMEKP---QPFFGLVMAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGK 189
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 190 KPHIIVATPGRLLDHLENTKGFSLRNLKFLVMDEADRLLDMDFGPILDKILKVLPRERRT 249
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL-NLRQEFV 313
LFSAT++ V L SL+ P RV + ++ + L+Q ++
Sbjct: 250 FLFSATLSSKVESLQRASLSNPARVSISSSKYATVETLQQTYI 292
>gi|302036818|ref|YP_003797140.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|190343232|gb|ACE75620.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|300604882|emb|CBK41215.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
Length = 431
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 134/220 (60%), Gaps = 3/220 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF + +S LL+ + + PT IQA IP AL GRD+ GCA TGTGKTAAF++P+L
Sbjct: 7 TSFDSLGVSPTLLRNLTKAGFAEPTAIQAQAIPHALAGRDVLGCAQTGTGKTAAFVIPML 66
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
ERL P+ R L+L PTREL +Q+ L + + VGG +++ Q LR
Sbjct: 67 ERLSGTPKG--QPRALILAPTRELAIQIQATIDTLGRDLQLFATTVVGGADMQAQVRGLR 124
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ PDI++ATPGRLLDH+ N + SL + +LVLDEADRMLD FA Q+ +I+ RQ
Sbjct: 125 QRPDIIVATPGRLLDHMWNG-TISLLAMSILVLDEADRMLDMGFAQQINQILDAMPEERQ 183
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
T+LFSATM + + L S+ PVRV V + A + Q
Sbjct: 184 TLLFSATMPNDLARLAQASVKDPVRVMVTKSATTADGVTQ 223
>gi|303288912|ref|XP_003063744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454812|gb|EEH52117.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 577
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 135/219 (61%), Gaps = 5/219 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F ++LS+P + I + Y T +QA TIP L GRD+ G A TG+GKT AF++P
Sbjct: 72 DKTFASLSLSKPTMAGIATMGYETMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFLVPS 131
Query: 150 LERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+E L + PR+ V++L PTREL +Q+Y VT+QL S L +GG + +
Sbjct: 132 VELLYHAKFMPRNGAG--VMILTPTRELALQIYNVTQQLMTKHSQTHGLIIGGANRRAEA 189
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K ++++ATPGRLLDH+ NT F+ S +++ +DEADRMLD F +M+ I+++
Sbjct: 190 EKLVKGVNLLVATPGRLLDHMQNTKGFTFSSLKIFCMDEADRMLDIGFEEEMRTIVKMIP 249
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
+ RQTMLFSAT T V DL +SL P + VD+ V+
Sbjct: 250 KDRQTMLFSATQTTKVEDLARLSLKSPTYIGVDDARAVS 288
>gi|88798356|ref|ZP_01113941.1| ATP-dependent RNA helicase, DEAD box family protein [Reinekea
blandensis MED297]
gi|88778796|gb|EAR09986.1| ATP-dependent RNA helicase, DEAD box family protein [Reinekea sp.
MED297]
Length = 433
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 132/223 (59%), Gaps = 3/223 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F ++ L+ P+LKA+ Y PTPIQA IP L GRD+ A TGTGKTA F LPI++
Sbjct: 3 FSELALADPILKAVTEQGYTTPTPIQAQGIPAVLSGRDLLAAAQTGTGKTAGFTLPIIQH 62
Query: 153 LLY--KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L+ +P RVLVL PTREL QV A++T V + GG+++ Q LR
Sbjct: 63 LITENRPVKANRCRVLVLTPTRELAAQVEDNVTAYAKYTDVRSEVVFGGVKINPQMQKLR 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRLLD LH+ + D+EVLVLDEADRMLD F ++ I+RL RQ
Sbjct: 123 RGVDILVATPGRLLD-LHSQNAIDFRDLEVLVLDEADRMLDMGFIHDIRRIMRLLPTQRQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++FSAT +D + L + PV V V + A +RQ+ +
Sbjct: 182 NLMFSATFSDEIRALAKTIVENPVEVSVTPKNTTAERVRQQVI 224
>gi|420137836|ref|ZP_14645791.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CIG1]
gi|403249405|gb|EJY62906.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CIG1]
Length = 449
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLAPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHGSVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|182412765|ref|YP_001817831.1| DEAD/DEAH box helicase [Opitutus terrae PB90-1]
gi|177839979|gb|ACB74231.1| DEAD/DEAH box helicase domain protein [Opitutus terrae PB90-1]
Length = 409
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + LS P+L+ + A Y PTPIQ IPV L G D+ G A TGTGKTAAF LPIL R
Sbjct: 3 FKALQLSAPVLRGVVAAGYTDPTPIQLRAIPVVLGGGDLIGSAQTGTGKTAAFALPILTR 62
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L + RVLVL PTREL QV R A+FT + GG+ +Q + L++
Sbjct: 63 L--GAHAARAPRVLVLEPTRELAAQVETAFRDFARFTDLRTVAVFGGVGYGLQRTELKRG 120
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
D+++ATPGRL+D+LH+ + +L +E+LVLDE DRMLD F +K+II+ C R RQT+
Sbjct: 121 VDVIVATPGRLMDYLHDR-TINLQGVEILVLDEVDRMLDMGFLPVVKDIIQRCPRQRQTL 179
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
FSAT+ + + S +L P RV V N V
Sbjct: 180 FFSATVPPEIQAVASFALRNPTRVEVGVNRSV 211
>gi|296387524|ref|ZP_06876999.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAb1]
gi|416877267|ref|ZP_11919721.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 152504]
gi|334839751|gb|EGM18425.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 152504]
Length = 449
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGGDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 161/294 (54%), Gaps = 18/294 (6%)
Query: 46 QKLIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENS----------SFHQ 95
+KL K K++ L K+ +L++ + E E +G K+ E + +F +
Sbjct: 17 KKLAEKIKKQALLKQKQLQESK-ESSHETDGDKDANSSVASTTETTIDPDAELKFNTFAE 75
Query: 96 MNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLY 155
+NL LL+AI +N+ PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL+ L +
Sbjct: 76 LNLVPDLLEAIQQMNFAKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQALWH 135
Query: 156 KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDI 215
LVL PTREL Q+ L + VGG+++ Q L + P I
Sbjct: 136 AQTPYFG---LVLAPTRELAFQIKDTFDALGATMGLRSVCIVGGMDMMDQARDLMRKPHI 192
Query: 216 VIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFS 275
++ATPGR++DHL +T FSL +++ LV+DEADR+LD F + +I+++ R T LFS
Sbjct: 193 IVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPPKRTTYLFS 252
Query: 276 ATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV----SFSNIDEVRLYN 325
ATMT+ + L SL PVRV V ++ A NL Q + + N + L N
Sbjct: 253 ATMTNKIEKLQRASLHNPVRVAVSTKYQTADNLVQSMMLVNDGYKNTILIHLLN 306
>gi|160880140|ref|YP_001559108.1| DEAD/DEAH box helicase [Clostridium phytofermentans ISDg]
gi|160428806|gb|ABX42369.1| DEAD/DEAH box helicase domain protein [Clostridium phytofermentans
ISDg]
Length = 514
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 132/202 (65%), Gaps = 3/202 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F++MNL +PLL+AI +I P+PIQ TIP+ L GRDI GCA TGTGKTAAF LPIL+
Sbjct: 2 NFNEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPILQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + R L++ PTREL +Q+Y+ ++TS++ ++ GG+ +Q + L+
Sbjct: 62 SL--SKGEGSGVRALIITPTRELAIQIYESFECFGKYTSLKQSVIYGGVGQSLQVNSLKA 119
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI+IATPGRL D L +L IE+ VLDEAD+MLD F + +K++I+L +TRQT
Sbjct: 120 GIDILIATPGRLND-LIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPKTRQT 178
Query: 272 MLFSATMTDAVNDLVSVSLTRP 293
+LFSATM + L + L P
Sbjct: 179 LLFSATMPKEIESLATNLLNNP 200
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 14 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 73
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 74 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 130
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 131 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVNPR 190
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 191 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 236
>gi|421158182|ref|ZP_15617475.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 25324]
gi|404549902|gb|EKA58715.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 25324]
Length = 449
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLAPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|116051990|ref|YP_789167.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa UCBPP-PA14]
gi|355639459|ref|ZP_09051174.1| hypothetical protein HMPREF1030_00260 [Pseudomonas sp. 2_1_26]
gi|392982323|ref|YP_006480910.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa DK2]
gi|419756955|ref|ZP_14283300.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PADK2_CF510]
gi|421172786|ref|ZP_15630547.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CI27]
gi|115587211|gb|ABJ13226.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|354831879|gb|EHF15883.1| hypothetical protein HMPREF1030_00260 [Pseudomonas sp. 2_1_26]
gi|384396710|gb|EIE43128.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317828|gb|AFM63208.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa DK2]
gi|404537189|gb|EKA46803.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa CI27]
Length = 449
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ +P+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAVPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 5 EEHDSPAEEPQPAVQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDI 64
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 121
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 122 QSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 181
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 182 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241
Query: 312 FV 313
++
Sbjct: 242 YL 243
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 135/220 (61%), Gaps = 3/220 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ L L +A + Y PTPIQ+ +IP+AL GRDI G A TG+GKTA+F+LPIL+
Sbjct: 72 TFKELGLIDSLCEACDKMGYKAPTPIQSESIPLALQGRDIIGLAETGSGKTASFVLPILQ 131
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q+ LVL PTREL Q+ L +V VGG+++ Q L K
Sbjct: 132 ALMEKP---QSFFGLVLAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGK 188
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 189 KPHIIVATPGRLLDHLENTKGFSLRSLKFLVMDEADRLLDMDFGPILDKILKVLPRERRT 248
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
LFSAT++ V L SL+ P RV + ++ + Q+
Sbjct: 249 FLFSATLSSKVESLQRASLSNPARVSISSSKYATVETLQQ 288
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 27 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 86
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 87 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 143
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 144 ALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 203
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 204 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 249
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|156083170|ref|XP_001609069.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796319|gb|EDO05501.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 433
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++F + + L KA ++ + PTPIQ A IP AL GRD+ G A TG+GKT AF +P+
Sbjct: 42 TTTFQSLGVCPELCKACQSMGWQAPTPIQMAAIPHALNGRDVIGLAVTGSGKTGAFTIPV 101
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L LL D Q +VL P+REL Q+ + R L+ +++V + +GG+++ Q S L
Sbjct: 102 LHHLL---EDVQRIYCVVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDMVHQASAL 158
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
K P +++A+PGRL DH+ NT FSLS ++ LV+DEADR+L + F ++ +II R
Sbjct: 159 AKRPHVIVASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIHAMPTER 218
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT LFSATMT ++ L ++L P+ V VD+ + A NL Q F+
Sbjct: 219 QTFLFSATMTKKLSKLQKMALKDPISVQVDDKYSTAENLDQRFL 262
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
Query: 82 EDAPPVEENS-SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
E P VEE + +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+G
Sbjct: 13 EPQPTVEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPMALQGRDIIGLAETGSG 72
Query: 141 KTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
KT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VGG+
Sbjct: 73 KTGAFALPILNALLDTP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGI 129
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+ Q L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +
Sbjct: 130 DSMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDK 189
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 190 ILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 242
>gi|115492529|ref|XP_001210892.1| ATP-dependent RNA helicase DDX18 [Aspergillus terreus NIH2624]
gi|121742586|sp|Q0CZS8.1|HAS1_ASPTN RecName: Full=ATP-dependent RNA helicase has1
gi|114197752|gb|EAU39452.1| ATP-dependent RNA helicase DDX18 [Aspergillus terreus NIH2624]
Length = 576
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 159/274 (58%), Gaps = 29/274 (10%)
Query: 67 EAEEYEENEGGKEFFEDA----------------PPVEENSSFHQMNLSRPLLKAIGALN 110
+AE+ E+ E G+ +DA P F ++NLS P +KAI +
Sbjct: 58 DAEDVEQTENGETAQDDAAKDAEAPLPSTMGLSLPTDAAPQKFDELNLSEPTMKAIRQMG 117
Query: 111 YIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---ILERLLYKPRDDQNTRVLV 167
+ T IQ TIP L GRDI G A TG+GKT AF++P +L L +KPR+ T V++
Sbjct: 118 FETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEMLSALRFKPRN--GTGVII 175
Query: 168 LVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHL 227
+ PTREL +Q++ V ++L +F S + +GG + + L K +++IATPGRLLDHL
Sbjct: 176 ITPTRELALQIFGVAKELCEFHSQTYGIVIGGANRRAEAEKLNKGVNLLIATPGRLLDHL 235
Query: 228 HNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLV 286
NT F + +VLVLDEADR LD F +++++I++ L S RQT+LFSAT T V DL
Sbjct: 236 QNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIVKILPSEERQTLLFSATQTTKVEDLA 295
Query: 287 SVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
+SL +P ++++ +H R+E + +D+
Sbjct: 296 RISL-KPGPLYINVDH------RKEHATVDGVDQ 322
>gi|333901178|ref|YP_004475051.1| DEAD/DEAH box helicase [Pseudomonas fulva 12-X]
gi|333116443|gb|AEF22957.1| DEAD/DEAH box helicase domain protein [Pseudomonas fulva 12-X]
Length = 449
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 143/225 (63%), Gaps = 5/225 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ LN+ PTP+QAA IP AL G+D+ A TG+GKTAAF+LP+L R
Sbjct: 2 FAQFALHERLLKAVAELNFTEPTPVQAAAIPPALEGKDLRVIAQTGSGKTAAFVLPMLNR 61
Query: 153 LL--YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
LL + + R L+++PTREL Q + + AQFT ++ L GG + KVQ ++LR
Sbjct: 62 LLGDGSSKARVSVRALIMLPTRELAQQTLKEVERFAQFTFLKGGLITGGEDFKVQAAMLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K DIVI TPGRL++H N + D+EVLVLDEADRMLD FA ++ + ++C+R Q
Sbjct: 122 KV-DIVIGTPGRLIEH-ANAGNLLFDDVEVLVLDEADRMLDMGFAEDVQRLAQMCNREHQ 179
Query: 271 TMLFSATMTDA-VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
T+LFSAT A + ++V+ L P + ++ E+A RQ+ ++
Sbjct: 180 TLLFSATSGGAGLREVVAQVLREPTHLQLNRVSELAEGTRQQIIT 224
>gi|356504849|ref|XP_003521207.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Glycine
max]
Length = 439
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 1/225 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + LS L++A L + P IQ IP+AL G+D+ G A TG+GKT AF L
Sbjct: 6 EETKTFKDLGLSESLVEACEKLGWKNPLKIQTEAIPLALEGKDVIGLAQTGSGKTGAFAL 65
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL PR ++ VL PTREL +Q+ + L V+ A+ VGG+++ Q
Sbjct: 66 PILHALLEAPRP-KDFFACVLSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSI 124
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+ K P I++ TPGR++DHL +T FSLS ++ LVLDEADR+L+E F + EI+++ R
Sbjct: 125 KIAKQPHIIVGTPGRVIDHLKHTKGFSLSRLKYLVLDEADRLLNEDFEESLNEILQMIPR 184
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
R+T LFSATMT V L V L PV++ + + L+Q++
Sbjct: 185 ERRTFLFSATMTKKVQKLQRVCLRNPVKIEASSKYSTVDTLKQQY 229
>gi|207344698|gb|EDZ71756.1| YHR065Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 496
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++NL L++A LNY PTPIQ+ IP AL G DI G A TG+GKTAAF +
Sbjct: 120 ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAI 179
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL RL + D + +L PTREL Q+ + L V VGG+ + Q
Sbjct: 180 PILNRLWH---DQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 236
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-S 266
L + P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ +
Sbjct: 237 DLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT 296
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ R T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 297 QERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLM 343
>gi|169609619|ref|XP_001798228.1| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
gi|143462316|sp|Q0UK12.2|RRP3_PHANO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|160701880|gb|EAT84178.2| hypothetical protein SNOG_07902 [Phaeosphaeria nodorum SN15]
Length = 546
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 135/224 (60%), Gaps = 5/224 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L A L Y TPIQ +IP+AL G+DI G A TG+GKTAAF+LPIL+
Sbjct: 116 TFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPILQ 175
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL KP Q L++ PTREL Q+ Q L +V+ A VGG+++ Q L K
Sbjct: 176 ALLDKP---QAYFGLIMAPTRELAYQISQQVDALGSIINVKCATLVGGMDMVPQAIALSK 232
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR-TRQ 270
P I++A+PGRLLDHL NT FSL ++ LVLDEADR+LD F + +I ++ R R
Sbjct: 233 RPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKIFKVLPRDDRH 292
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFV-DNNHEVALNLRQEFV 313
T LFSATM+ V L +L PVRV + ++H+V L Q ++
Sbjct: 293 TYLFSATMSSKVESLQRAALKNPVRVSISSSSHQVVSTLLQSYM 336
>gi|115375824|ref|ZP_01463075.1| ATP-dependent RNA helicase DeaD [Stigmatella aurantiaca DW4/3-1]
gi|310820250|ref|YP_003952608.1| ATP-dependent RNA helicase rhle [Stigmatella aurantiaca DW4/3-1]
gi|115367134|gb|EAU66118.1| ATP-dependent RNA helicase DeaD [Stigmatella aurantiaca DW4/3-1]
gi|309393322|gb|ADO70781.1| ATP-dependent RNA helicase RhlE [Stigmatella aurantiaca DW4/3-1]
Length = 496
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 127/225 (56%), Gaps = 5/225 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ LS PLL+A+ A Y PTPIQ IP AL G+D+ GCA TGTGKTAAF LPIL
Sbjct: 2 TFDELKLSEPLLRAVKAEGYTTPTPIQQRAIPPALTGQDVLGCAQTGTGKTAAFALPILH 61
Query: 152 RLLY----KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
RL P + RVLVL PTREL Q+ + +FT + A+ GG+ QE
Sbjct: 62 RLSAGRSPPPAQGRPIRVLVLTPTRELASQIADSFQAYGRFTGLSWAVIFGGVGQHAQEQ 121
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LR+ D++IATPGRLLD L S +EV VLDEADRMLD F +K II
Sbjct: 122 TLRRGVDVLIATPGRLLD-LMGQGLVSYKALEVFVLDEADRMLDMGFIHDVKRIISALPP 180
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
RQT+ FSATM + L L PVRV V A + Q+
Sbjct: 181 KRQTLFFSATMPPEIQSLAQGILKSPVRVEVTPESTTAETVEQKM 225
>gi|15599145|ref|NP_252639.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gi|218889767|ref|YP_002438631.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa LESB58]
gi|418587191|ref|ZP_13151225.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592075|ref|ZP_13155953.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P2]
gi|421152185|ref|ZP_15611773.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 14886]
gi|421518498|ref|ZP_15965172.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO579]
gi|9950138|gb|AAG07337.1|AE004813_4 probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO1]
gi|218769990|emb|CAW25752.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa LESB58]
gi|375042196|gb|EHS34856.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375049103|gb|EHS41612.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
MPAO1/P2]
gi|404347980|gb|EJZ74329.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa PAO579]
gi|404525815|gb|EKA36064.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa ATCC 14886]
Length = 449
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|313109386|ref|ZP_07795348.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 39016]
gi|386068049|ref|YP_005983353.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa NCGM2.S1]
gi|310881850|gb|EFQ40444.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 39016]
gi|348036608|dbj|BAK91968.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa NCGM2.S1]
Length = 449
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|451987161|ref|ZP_21935321.1| ATP-dependent RNA helicase PA3950 [Pseudomonas aeruginosa 18A]
gi|451755216|emb|CCQ87844.1| ATP-dependent RNA helicase PA3950 [Pseudomonas aeruginosa 18A]
Length = 449
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASIRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|90076578|dbj|BAE87969.1| unnamed protein product [Macaca fascicularis]
Length = 255
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|107103467|ref|ZP_01367385.1| hypothetical protein PaerPA_01004537 [Pseudomonas aeruginosa PACS2]
Length = 449
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|220918247|ref|YP_002493551.1| DEAD/DEAH box helicase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956101|gb|ACL66485.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 488
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 135/226 (59%), Gaps = 12/226 (5%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F +NLS L+A+ + +PTPIQA IP AL GRD+ G AATGTGKTAAF+LPI
Sbjct: 14 SPTFADLNLSEKTLQALERAGFEHPTPIQAQAIPPALGGRDVIGAAATGTGKTAAFLLPI 73
Query: 150 LERL---LYKPRD-------DQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
+ERL P+D R LVL PTREL VQ+ + + V AL +GG
Sbjct: 74 IERLGGGAPAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELDRFGRGRHVRGALVIGG 133
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+ + Q + LR ++++ATPGRL+DHL + L +EVLVLDEADRMLD FA Q+K
Sbjct: 134 VGMGAQSAALRDH-EVIVATPGRLVDHLQQG-TARLDGLEVLVLDEADRMLDMGFAPQLK 191
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
I+ + RQT+LFSATM V + L PVRV V + +A
Sbjct: 192 RILARVPKVRQTLLFSATMAGEVAEFARAHLRDPVRVEVARSGTLA 237
>gi|85816749|gb|EAQ37935.1| DEAD/DEAH box helicase [Dokdonia donghaensis MED134]
Length = 425
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS LLKA+ Y P+PIQ IP L G+D+ A TGTGKTA F LP+L
Sbjct: 2 SFKSLGLSDALLKAVSEKGYTTPSPIQQKAIPKVLEGKDVLASAQTGTGKTAGFTLPMLH 61
Query: 152 RLLYKPRDDQ-NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L+ PR + R LVL PTREL Q+Y R+ +++ ++ + GG+ Q +R
Sbjct: 62 NLIANPRQGRRKVRALVLTPTRELAAQIYDNVREYSKYVDIKSTVIFGGVNQNPQVRTIR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRLLD L N SLSDIE LVLDEADRMLD F +K+++RL RQ
Sbjct: 122 QGVDILVATPGRLLD-LENQGLLSLSDIEFLVLDEADRMLDMGFIHDIKKVLRLVPAKRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRV 296
+LFSAT + L S LT PV V
Sbjct: 181 NLLFSATFNKDIKKLASSILTNPVLV 206
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ + L +A + Y PTPIQ +IP+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 53 TFKELGIIEQLCEACETMGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 112
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q L+L PTREL Q+ + L V + VGG+++ Q L K
Sbjct: 113 ALMEKP---QPFFGLILAPTRELAYQISKSFESLGASLGVRSCVIVGGMDMVSQSISLGK 169
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL +++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 170 KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRT 229
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEVALNLRQEFV 313
LFSATM+ V L SL+ P+RV V + ++ L Q ++
Sbjct: 230 FLFSATMSSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQSYL 272
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 134/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG GKT AF L
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGPGKTGAFAL 80
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 81 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|301111750|ref|XP_002904954.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095284|gb|EEY53336.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 847
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 149/244 (61%), Gaps = 5/244 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
F + LS + + + A+ Y PTPIQ ++P+ L G+D A TG+GKTAAF++P++
Sbjct: 36 GGFQHLGLSPLVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLVPMV 95
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
E+L + R +VL PTREL VQ + +QL++FTS+++AL VGG + Q +
Sbjct: 96 EKL-KEHSTKIGVRAVVLSPTRELAVQTLRFAKQLSKFTSLKMALIVGGEGMDQQFEAIA 154
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PD+++ATPGRL+ L P F+L +E +V DEADR+ + FA Q++EI++ +RQ
Sbjct: 155 SNPDVLVATPGRLMHLLQEIPDFNLKAVEYVVFDEADRIFEMGFAEQLQEILKNMPTSRQ 214
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
T+LFSAT+ A+ L+ P + +D ++++ NL+ F + ++D+ L+ L
Sbjct: 215 TLLFSATLPKALVQFARAGLSDPELIRLDVENKISENLKMAFFTVRSLDKPALF----LY 270
Query: 331 LLRE 334
++RE
Sbjct: 271 MVRE 274
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +N+S +LKA+ NY PTPIQA IP L GRD+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFENLNISPVILKALAKENYKAPTPIQAQAIPAVLAGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 152 RL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L KP + R LVL PTREL +Q+ + +QFT + VGG+ K QE
Sbjct: 62 LLNQQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRSTAIVGGVSQKTQERA 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L++ DI+IATPGRLLD L N L +E+LVLDEADRMLD F +K II
Sbjct: 122 LQQGADILIATPGRLLD-LMNQKHVDLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+QT+ FSATM + LV L PV+V
Sbjct: 181 KQTLFFSATMPAEITQLVQTLLHNPVKV 208
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 152/274 (55%), Gaps = 12/274 (4%)
Query: 70 EYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
EY+ ++G ED ++ ++ + L+ L +A L + P+ IQ IPVAL G+
Sbjct: 49 EYDPSKGSDR--EDDTAEDQKLTWKDLGLNETLCQACDELKWRSPSKIQREAIPVALQGK 106
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFT 189
D+ G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L
Sbjct: 107 DVIGLAETGSGKTGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGI 163
Query: 190 SVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRM 249
++ + VGG+++ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+
Sbjct: 164 GIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRI 223
Query: 250 LDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLR 309
L+ F ++ +I+++ R R+T LFSATMT V L SL PV+V V N ++ L+
Sbjct: 224 LNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQ 283
Query: 310 QEF----VSFSNIDEVRLYNVLG---LMLLRENC 336
Q + V + ++ V + N L M+ C
Sbjct: 284 QSYLFIPVKYKDVYLVHILNDLAGNSFMIFCSTC 317
>gi|416864075|ref|ZP_11915427.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 138244]
gi|334835095|gb|EGM13996.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa 138244]
gi|453044054|gb|EME91780.1| putative ATP-dependent RNA helicase [Pseudomonas aeruginosa
PA21_ST175]
Length = 449
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L + PTPIQA IP AL GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHGSVRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK DI++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDILVATPGRLLD-LYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRRR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSIRQWLVPVDKKRKAELF 235
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ +S+PL A L ++ P+ IQ A +P AL G+D+ G A TG+GKT AF +P+L+
Sbjct: 55 TFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 114
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ Q L + A+ VGG+++ Q L +
Sbjct: 115 SLLDHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALAR 171
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL NT F+L ++ L++DEADR+L+ F ++ +I+++ + R+T
Sbjct: 172 RPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPKERRT 231
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
LFSATMT V+ L SL P RV V ++ NL+Q ++ N
Sbjct: 232 YLFSATMTKKVSKLERASLRDPARVSVSTRYKTVDNLKQHYIFIPN 277
>gi|392542118|ref|ZP_10289255.1| ATP-dependent RNA helicase [Pseudoalteromonas piscicida JCM 20779]
Length = 411
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 145/246 (58%), Gaps = 5/246 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ L LL AI L + PTPIQ +IP+ L G D+ A TGTGKTAAFMLPIL
Sbjct: 2 TFSELQLHPELLSAITELGFESPTPIQEKSIPLLLSGFDLIASAQTGTGKTAAFMLPILH 61
Query: 152 RLLYK-PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+L + +++ R L+L PTREL QV + T +L TS+ V GG + QE LR
Sbjct: 62 SMLMGGTQGEKSVRALILTPTRELAQQVAEHTEKLVVNTSLNVVCLYGGANIGPQEKRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
D+V+ATPGRLLDHL + +L +I+ LV DEADRMLD F ++K I+R RQ
Sbjct: 122 AGVDVVVATPGRLLDHLIKG-TLTLKNIQHLVFDEADRMLDMGFMGEIKRIMRTMPLKRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
T+LFSAT+ DAV V L P RV V++ + A + Q F S +DE R ++ +
Sbjct: 181 TLLFSATVDDAVLSQVKPWLNDPKRVGVESQNSTASTVTQTFYS---VDEDRKRELISHL 237
Query: 331 LLRENC 336
+ + N
Sbjct: 238 IGKNNW 243
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 135/224 (60%), Gaps = 3/224 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L L +A L Y PT IQA +IP+AL RD+ G A TG+GKTAAF LPIL+
Sbjct: 46 TFKDLGLIPQLCEACETLGYKAPTAIQAESIPLALQNRDLIGLAETGSGKTAAFALPILQ 105
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q LVL PTREL Q+ + L SV + VGG+++ Q + K
Sbjct: 106 ALMDKP---QPFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIGK 162
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 163 RPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKVLPRERRT 222
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
LFSATM+ V L SL+ P+RV V +N ++ ++ F
Sbjct: 223 FLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQYYMF 266
>gi|381199589|ref|ZP_09906736.1| putative helicase [Sphingobium yanoikuyae XLDN2-5]
gi|427407897|ref|ZP_18898099.1| hypothetical protein HMPREF9718_00573 [Sphingobium yanoikuyae ATCC
51230]
gi|425713860|gb|EKU76872.1| hypothetical protein HMPREF9718_00573 [Sphingobium yanoikuyae ATCC
51230]
Length = 476
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 136/237 (57%), Gaps = 3/237 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F+++ LS P++KA+ A Y PTPIQ IPV L GRD+CG A TGTGKTAAF LP L+
Sbjct: 3 FNELGLSEPIIKALTAKKYAEPTPIQQKAIPVLLEGRDLCGIAQTGTGKTAAFALPSLDY 62
Query: 153 LLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
P+ + R+LVL PTREL Q+ Q R +F + V GG+ V Q L
Sbjct: 63 FARNPKPTPIKGCRMLVLSPTRELAAQIAQSFRDYGRFLRLSVETVFGGVPVNKQIRALS 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
DIV+ATPGRLLD L + +F++ D E+ VLDEAD+M+D F +K I +L R RQ
Sbjct: 123 AGVDIVVATPGRLLD-LIDQRAFTIKDTEIFVLDEADQMMDMGFIHPLKRIAKLLPRDRQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
+ FSATM + L L PV+V V A +RQ+ + ++ L +++
Sbjct: 182 NLFFSATMPKEIEALAGQFLNDPVKVSVAPQSTTAERVRQQLTFVNQAEKQALLHIV 238
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +N+S +LKA+ NY PTPIQA IP L GRD+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFEDLNISPVILKALAKENYKAPTPIQAQAIPAVLAGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 152 RL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L KP + R LVL PTREL +Q+ + +QFT + VGG+ K QE
Sbjct: 62 LLNQQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRSTAIVGGVSQKTQERA 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L++ DI+IATPGRLLD L N L +E+LVLDEADRMLD F +K II
Sbjct: 122 LQQGADILIATPGRLLD-LMNQKHVDLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+QT+ FSATM + LV L PV+V
Sbjct: 181 KQTLFFSATMPAEITQLVQTLLHNPVKV 208
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 145/256 (56%), Gaps = 10/256 (3%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + + L +A L + PT IQ +IP+AL G+D+ G A TG+GKT +F L
Sbjct: 22 EEEVTFKSLGIVDVLCEACEQLKWKSPTKIQKESIPLALQGKDVIGLAETGSGKTGSFAL 81
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 82 PILQALLETP---QRLFALVLTPTRELAFQISEQFEALGAGIGVKCAVVVGGIDMMTQAL 138
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT FSL ++ LV+DEADR+L+ F ++ +I+R+ R
Sbjct: 139 TLAKKPHVVIATPGRLVDHLENTKGFSLKALKYLVMDEADRILNMDFEEEVDKILRVIPR 198
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV----SFSNIDEVRL 323
R T L+SATMT V L SL PV+V V + ++ L Q ++ F ++ V L
Sbjct: 199 ERHTYLYSATMTKKVQKLQRASLKDPVKVEVSSKYQTVEKLMQYYLFIPAKFKDVYLVHL 258
Query: 324 YNVLG---LMLLRENC 336
N L M+ C
Sbjct: 259 LNELAGNSFMVFCSTC 274
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 20 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 79
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 80 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSL 136
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 137 ALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 196
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 197 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 242
>gi|325982424|ref|YP_004294826.1| DEAD/DEAH box helicase domain-containing protein [Nitrosomonas sp.
AL212]
gi|325531943|gb|ADZ26664.1| DEAD/DEAH box helicase domain protein [Nitrosomonas sp. AL212]
Length = 476
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 135/224 (60%), Gaps = 6/224 (2%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
+ N SF Q+ LS LL+AI Y PTPIQ IP+ L G D+ G A TGTGKTA F
Sbjct: 1 MSSNISFEQLGLSTDLLRAISEQGYTNPTPIQQQAIPIILKGFDVMGGAQTGTGKTAGFT 60
Query: 147 LPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
LP+L++L + TR L+LVPTREL +QVY+ R ++ +++ A+ G+
Sbjct: 61 LPMLQKLESHANSSTSPAKHPTRALILVPTRELAIQVYESVRAYGKYVALKSAVIYDGVN 120
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ VQ + +R +I++ATPGRLLDHL + LS IE+L+LDEADRMLD F +K+I
Sbjct: 121 IDVQIAAIRSGVEILVATPGRLLDHLQQK-NLILSKIEILILDEADRMLDMGFLPDIKQI 179
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
I++ RQ ++FSAT ++ + L L P+ + V + V+
Sbjct: 180 IQMLPDQRQNLMFSATFSEEIKKLAGKILKSPILIEVAKQNSVS 223
>gi|393245773|gb|EJD53283.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 463
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 133/226 (58%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF ++ L PLL+A+ L++ PT IQAA +P AL G DI G A TG+GKTAAF L
Sbjct: 22 ETRPSFKELGLIEPLLEALDKLSFARPTEIQAAALPHALAGHDIIGVAETGSGKTAAFAL 81
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL++L PR + PTREL Q+ Q L V VA+ +GG++ Q+
Sbjct: 82 PILQKLWEDPRP---LFACCIAPTRELAFQIAQSFEALGGSLGVRVAVIIGGVKEIEQQI 138
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I++A PGRL HL NT FSL ++ LVLDEADR+LD F + +++++ +
Sbjct: 139 ALSKRPHIIVAAPGRLNWHLENTKGFSLRTLKYLVLDEADRLLDLDFGKDIDKLLKVLPK 198
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R T LFSATMTD V L SL+ P RV V + + L Q ++
Sbjct: 199 ERHTYLFSATMTDKVEKLQRASLSNPKRVAVSSKYSTVSTLLQYYL 244
>gi|255087406|ref|XP_002505626.1| predicted protein [Micromonas sp. RCC299]
gi|226520896|gb|ACO66884.1| predicted protein [Micromonas sp. RCC299]
Length = 620
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 133/219 (60%), Gaps = 5/219 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F + LS+ + I L Y T +QA TIP L GRD+ G A TG+GKT AF++P
Sbjct: 118 DKTFDSLTLSKQTMAGISELGYTRMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFLIPS 177
Query: 150 LERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+E L + PR+ T V+VL PTREL +Q+Y V +QL + S L +GG + +
Sbjct: 178 VELLYHAKFMPRN--GTGVMVLSPTRELALQIYNVAQQLMKKHSQTHGLIIGGANRRAEA 235
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K ++++ATPGRLLDH+ NT F+ ++V +DEADRMLD F +M+ I+R+
Sbjct: 236 EKLVKGVNLLVATPGRLLDHMQNTKGFAFGSLKVFCMDEADRMLDIGFEEEMRTIVRMIP 295
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
+ RQTMLFSAT T V DL +SL P + VD+ V+
Sbjct: 296 KDRQTMLFSATQTTKVEDLARLSLKSPTYIGVDDARAVS 334
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 139/245 (56%), Gaps = 5/245 (2%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
E+A +F + L PLL+A+ L Y PT IQ +P AL GRDI G A+TG+GK
Sbjct: 5 EEASTSTAEPTFKSLGLINPLLEALDQLKYKEPTDIQREALPHALEGRDIIGVASTGSGK 64
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
TAAF LPIL++L +PR VL PTREL Q+ Q L V A+ VGG++
Sbjct: 65 TAAFALPILQKLWEEPR---GLFACVLAPTRELAYQISQQFEALGSAMGVRCAVLVGGMD 121
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I++ATPGRL HL T FSL ++ LVLDEADR+LD F + +I
Sbjct: 122 LIDQAVALAKKPHIIVATPGRLQQHLTETKGFSLRGLKFLVLDEADRLLDLDFGPVIDQI 181
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSNID 319
+++ + R T LFSATMT V L SL+ P+RV V + ++ L Q F+ S D
Sbjct: 182 LKIIPKERTTYLFSATMTTKVAKLQRASLSNPIRVEVSSKYQTVSTLLQYYLFIPLSQKD 241
Query: 320 EVRLY 324
+Y
Sbjct: 242 VHLIY 246
>gi|344300784|gb|EGW31105.1| ATP-dependent RNA helicase HAS1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 560
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 139/216 (64%), Gaps = 7/216 (3%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE+ F LS P +KAI + + T +QA TIP L GRD+ G A TG+GKT AF++
Sbjct: 93 EEDVFFKDAELSEPTMKAITEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLI 152
Query: 148 P---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
P +L L KPR+ T V+++ PTREL +Q++ V RQL + S + +GG + +
Sbjct: 153 PAIELLHSLKIKPRN--GTAVIIITPTRELALQIFGVARQLMEHHSQTCGIVIGGADRRA 210
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR- 263
+ L K ++++ATPGRLLDHL NTP F ++++ LV+DEADR+L+ F +MK+II+
Sbjct: 211 EAVKLGKGVNLLVATPGRLLDHLKNTPGFVFNNLKALVIDEADRILEIGFEDEMKQIIKI 270
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
L + RQ+MLFSAT T V DL +SL RP ++++
Sbjct: 271 LPNENRQSMLFSATQTTKVEDLARISL-RPGPLYIN 305
>gi|332286324|ref|YP_004418235.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330430277|gb|AEC21611.1| putative ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 477
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F + L+ PLL+A+ Y +PTPIQA IP + G D+ A TGTGKTA F LPIL
Sbjct: 5 NTFASLGLAEPLLRAVTDTGYEHPTPIQAQAIPQVMQGGDLLAAAQTGTGKTAGFTLPIL 64
Query: 151 ERLLYKP---RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
RLL P R RVL+L PTREL QV + R ++ TS+ + GG+ + Q S
Sbjct: 65 HRLLQNPAQGRKPGQPRVLILTPTRELTAQVEESVRTYSKHTSIRSMVMFGGVNINPQIS 124
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LRK DI++ATPGRLLDH + LS +E+LVLDEADRMLD F ++ I+ L +
Sbjct: 125 ALRKPLDILVATPGRLLDHAQQK-TVDLSAVEILVLDEADRMLDMGFIRDIRRILALLPK 183
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
RQ +LFSAT +D + L L P+ + V
Sbjct: 184 QRQNLLFSATFSDEIRALSKGVLNDPIEISV 214
>gi|366994590|ref|XP_003677059.1| hypothetical protein NCAS_0F02200 [Naumovozyma castellii CBS 4309]
gi|342302927|emb|CCC70704.1| hypothetical protein NCAS_0F02200 [Naumovozyma castellii CBS 4309]
Length = 508
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 143/230 (62%), Gaps = 9/230 (3%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP-- 148
+ F + LS P LKAI + + TP+QA TIP + GRD+ G A TG+GKT AF++P
Sbjct: 44 TKFQDLTLSPPTLKAIEKMGFTTLTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAI 103
Query: 149 -ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
+L L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 104 ELLHSLKFKPRN--GTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAD 161
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCS 266
L K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +MK+II+ L +
Sbjct: 162 KLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMKQIIKILPN 221
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRP---VRVFVDNNHEVALNLRQEFV 313
RQ+MLFSAT T V DL +SL + + V ++N A L Q +V
Sbjct: 222 EDRQSMLFSATQTTKVEDLARISLRKGPLFINVASEDNTSTADGLEQGYV 271
>gi|337278667|ref|YP_004618138.1| ATP-dependent RNA helicase [Ramlibacter tataouinensis TTB310]
gi|334729743|gb|AEG92119.1| Candidate ATP-dependent RNA helicase [Ramlibacter tataouinensis
TTB310]
Length = 486
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 6/242 (2%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
PV SF ++L+ PL +A+ + Y TPIQA IPV L GRD+ G A TGTGKTAAF
Sbjct: 5 PVVMTDSFSNLSLAEPLARAVAEMGYETMTPIQAQAIPVVLTGRDVMGAAQTGTGKTAAF 64
Query: 146 MLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
LP+L+RLL + R LVL+PTREL QV Q + A++T++ A+ GG+
Sbjct: 65 SLPLLQRLLKHENSSTSPARHPVRALVLLPTRELADQVAQQVKLYAKYTNLRSAVVFGGM 124
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
++K Q L++ ++++ATPGRLLDH+ + L +E +VLDEADRMLD F ++
Sbjct: 125 DMKPQTLELKRGVEVLVATPGRLLDHIEAKNAV-LGQVEYVVLDEADRMLDIGFLPDLQR 183
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
I+ + R T+LFSAT + + L + L PV + V +E A + Q F S ++ D+
Sbjct: 184 ILSYLPKQRTTLLFSATFSPEIKRLANSYLKDPVTIEVARPNETASTVEQHFYSVTDDDK 243
Query: 321 VR 322
R
Sbjct: 244 RR 245
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +N+S +LKA+ NY PTPIQA IP L GRD+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFQDLNISPIILKALAKENYKTPTPIQAQAIPAVLAGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 152 RL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L KP + R LVL PTREL +Q+ + +QFT + VGG+ K QE
Sbjct: 62 LLNEQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRSTAIVGGVSQKTQERA 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L++ DI+IATPGRL+D L N L +E+LVLDEADRMLD F +K II
Sbjct: 122 LQQGADILIATPGRLID-LINQKHVDLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRV 296
+QT+ FSATM + LV L PV+V
Sbjct: 181 KQTLFFSATMPSEITQLVKTLLHNPVKV 208
>gi|86159377|ref|YP_466162.1| DEAD/DEAH box helicase-like protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775888|gb|ABC82725.1| DEAD/DEAH box helicase-like protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 487
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/224 (45%), Positives = 132/224 (58%), Gaps = 10/224 (4%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ +F +NLS L A+ + +PTPIQ IP AL GRD+ G AATGTGKTAAF+LPI
Sbjct: 14 SPTFADLNLSEKTLHALERAGFEHPTPIQTQAIPPALAGRDVIGAAATGTGKTAAFLLPI 73
Query: 150 LERLLYKPRDDQ--------NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
+ERL D+ R LVL PTREL VQ+ + + V AL +GG+
Sbjct: 74 IERLSGAATKDRPAAAHARPGPRALVLAPTRELAVQIAGELDRFGRGRHVRGALVIGGVG 133
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q + LR ++++ATPGRL+DHL + L +EVLVLDEADRMLD FA Q+K I
Sbjct: 134 MGAQSAALRDH-EVIVATPGRLVDHLQQG-TARLDGLEVLVLDEADRMLDMGFAPQLKRI 191
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
+ + RQT+LFSATM V D L PVRV V + +A
Sbjct: 192 LARVPKVRQTLLFSATMAGEVADFARAHLRDPVRVEVARSGTLA 235
>gi|78776226|ref|YP_392541.1| DEAD/DEAH box helicase [Sulfurimonas denitrificans DSM 1251]
gi|78496766|gb|ABB43306.1| DEAD/DEAH box helicase-like protein [Sulfurimonas denitrificans DSM
1251]
Length = 398
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 133/223 (59%), Gaps = 8/223 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS P+LKAI Y PTPIQ IP+ L +DI A TGTGKTA F LP+LE
Sbjct: 2 SFTTLGLSAPILKAIKDQGYTKPTPIQKQAIPIILSKKDILAGAQTGTGKTAGFTLPLLE 61
Query: 152 RLLYKPRDDQNT----RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
L RD +T R L+L PTREL QV + ++ S + GG+ + Q S
Sbjct: 62 LL---SRDKSSTKKRIRALILTPTRELAAQVGESVSIYGKYLSFTSTIIYGGVSINPQLS 118
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LRK DIVIATPGRLLDHL S L D+E LVLDEADRMLD F + +K+++ + +
Sbjct: 119 ALRKGVDIVIATPGRLLDHLSQK-SIDLKDVEFLVLDEADRMLDMGFINDIKKVLAVLPK 177
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+QT+LFSAT +D + L L PV + V+ ++ A +++Q
Sbjct: 178 NKQTLLFSATYSDEIKKLSDRLLNSPVLIEVERPNKTAQSIKQ 220
>gi|313205949|ref|YP_004045126.1| dead/deah box helicase domain-containing protein [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485266|ref|YP_005394178.1| dead/deah box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|386322068|ref|YP_006018230.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-GD]
gi|416111966|ref|ZP_11592990.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
RA-YM]
gi|312445265|gb|ADQ81620.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|315022262|gb|EFT35290.1| DEAD/DEAH box helicase domain protein [Riemerella anatipestifer
RA-YM]
gi|325336611|gb|ADZ12885.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-GD]
gi|380459951|gb|AFD55635.1| dead/deah box helicase domain protein [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
Length = 371
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 137/237 (57%), Gaps = 2/237 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q++LS P+LKAI Y PT IQ IP L GRD+ GCA TGTGKTAAF +P+L+
Sbjct: 2 NFTQLSLSSPILKAISDAGYTTPTAIQEKAIPTILEGRDLIGCAQTGTGKTAAFSIPLLQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P+ ++ R L+L PTREL +Q+ + Q ++F +++ GG+ QE L +
Sbjct: 62 ILSETPKKGKSVRALILTPTRELAIQIQENIEQYSKFLNIKHLSIFGGVPQGKQERALNQ 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI+IATPGRLLD L SLS IE+LVLDEADRMLD F + +K+I+ + RQT
Sbjct: 122 GVDILIATPGRLLD-LMQQGLLSLSQIEILVLDEADRMLDMGFVNDVKKILTKVPKKRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR-LYNVL 327
+ FSATM +++ L P V V A + Q D+ L N+L
Sbjct: 181 LFFSATMPNSIRQFAETILDNPAEVTVTPVSSTAKTIEQSVYFVEKNDKTNLLINIL 237
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L ++ L + PTPIQ IP AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 47 TFASLGIIPELCQSCATLAFKAPTPIQVEAIPSALQGRDVIGLAQTGSGKTAAFSLPILQ 106
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+L P Q L+L PTREL Q+ Q L V A+ VGG+++ Q L K
Sbjct: 107 KLWENP---QPFFALILAPTRELAYQISQQVTSLGSPLGVRTAVIVGGMDMMSQSIALSK 163
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGRL+DHL NT FSL +++ LV+DEADR+LD F + +I+++ + R T
Sbjct: 164 RPHVIVATPGRLMDHLENTKGFSLKNVKFLVMDEADRLLDMDFGPIIDKILKVIPKERNT 223
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
LFSATMT V L SL +PVRV V +
Sbjct: 224 YLFSATMTTKVAKLQRASLNKPVRVEVATKYS 255
>gi|328771154|gb|EGF81194.1| hypothetical protein BATDEDRAFT_87448 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L++A L + P+ IQ A+IPVAL GRDI G A TG+GKTAAF LPIL+ L P Q
Sbjct: 22 LIEACTTLGFKKPSDIQCASIPVALTGRDIIGLAQTGSGKTAAFALPILQTLFANP---Q 78
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
+ V+ PTREL Q+ + L V A+ VGG+++ Q L K P ++I TPG
Sbjct: 79 HLYACVIAPTRELAFQISEQFEALGSVIGVRCAVIVGGMDMMSQSIALSKKPHVIICTPG 138
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RL+DHL NT F+L ++ LV+DEADR+LD F +++++++++ R R T LFSATMT
Sbjct: 139 RLVDHLENTKGFNLKHLKYLVMDEADRLLDLDFGAEIEKVLKVIPRERNTYLFSATMTSK 198
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
V L SL PV+V V + L Q + F
Sbjct: 199 VEKLQRASLVNPVKVEVATKYSTVDTLLQYYTFF 232
>gi|164661763|ref|XP_001732004.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
gi|159105905|gb|EDP44790.1| hypothetical protein MGL_1272 [Malassezia globosa CBS 7966]
Length = 470
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 139/242 (57%), Gaps = 8/242 (3%)
Query: 83 DAPPVEEN---SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
DAP EE+ SSF + + P+ +A L++ PT IQA IP AL GRD+ G A TG+
Sbjct: 14 DAPDAEEHEKASSFSDLGVIEPICEACEKLHFSAPTDIQAQAIPHALQGRDVIGLAQTGS 73
Query: 140 GKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
GKTAAF +PIL+ L PR +L PTREL Q+ Q L V A VGG
Sbjct: 74 GKTAAFSIPILQGLWDDPRP---LFACILAPTRELSYQISQQIEALGATIGVRCATIVGG 130
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+++ Q L K P +++ATPGRL DHL NT FSL + LV+DEADR+LD F +
Sbjct: 131 MDMMTQSIALSKRPHVIVATPGRLQDHLENTKGFSLRSLRYLVMDEADRLLDLDFGPIID 190
Query: 260 EIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSN 317
++++ + R+TMLFSATMT V L SL PVR+ + + L+Q F+ F++
Sbjct: 191 KLLQNIPKERRTMLFSATMTTKVAKLQRASLRNPVRIEIGTKYSTVSTLQQYYLFMPFAH 250
Query: 318 ID 319
D
Sbjct: 251 KD 252
>gi|334344694|ref|YP_004553246.1| DEAD/DEAH box helicase [Sphingobium chlorophenolicum L-1]
gi|334101316|gb|AEG48740.1| DEAD/DEAH box helicase domain protein [Sphingobium chlorophenolicum
L-1]
Length = 460
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 138/236 (58%), Gaps = 3/236 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + L+ P+L+A+ A Y PTPIQA IP+ L G+D+CG A TGTGKTAAF LP L+
Sbjct: 3 FTDLGLAEPILRALAAKKYGSPTPIQAQAIPMLLKGKDLCGIAQTGTGKTAAFALPSLDH 62
Query: 153 LLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
P+ Q R+LVL PTREL Q+ Q R +F + V + GG+ + Q L
Sbjct: 63 FARNPKPTPLQGCRMLVLSPTRELAAQIAQSFRDYGRFLKLSVEVVFGGVPINRQIRTLG 122
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DIV+ATPGRLLD L + +F++ D E+ VLDEAD+M+D F +K I +L + RQ
Sbjct: 123 RGVDIVVATPGRLLD-LIDQRAFTIKDTEIFVLDEADQMMDMGFIHPLKRIAKLLPKERQ 181
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNV 326
+ FSATM + L + L PV+V V A +RQ+ + +++ L N+
Sbjct: 182 NLFFSATMPGEIEALAAQFLHDPVKVSVAPQSTTAERVRQQATFVNQMEKQALLNL 237
>gi|385203300|ref|ZP_10030170.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385183191|gb|EIF32465.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 491
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 138/235 (58%), Gaps = 6/235 (2%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
D P S+F Q L+ +LKA+ Y PTPIQ IPV L GRD+ G A TGTG
Sbjct: 1 MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTG 60
Query: 141 KTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
KTA+F LPI++RLL + + R L+L PTREL QV + A+ T++ A+
Sbjct: 61 KTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAV 120
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
GG+++ Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F
Sbjct: 121 VFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFL 179
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ I+ L + RQT+LFSAT + + L + L P + V ++ A N+RQ
Sbjct: 180 PDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQ 234
>gi|406937818|gb|EKD71181.1| hypothetical protein ACD_46C00260G0006 [uncultured bacterium]
Length = 543
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 134/227 (59%), Gaps = 4/227 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+NL+ L KA+ A Y PT +QA +IP L G D+ CA TGTGKTAAF+LP L+
Sbjct: 2 SFAQLNLNDHLHKALKACGYTEPTSVQAKSIPAILAGNDLVACAQTGTGKTAAFVLPALQ 61
Query: 152 RL-LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL + KP + TR+L+L PTREL Q+ + +F + VGG+ Q L
Sbjct: 62 RLSMQKP--SKTTRILILTPTRELAAQITKAASLYGKFLKFNIVSLVGGMPYHHQIKDLA 119
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ DI++ATPGRLLDH+ + LS +E+LVLDEADRMLD F + I +L RQ
Sbjct: 120 RGADIIVATPGRLLDHI-ESKRVDLSHVEMLVLDEADRMLDMGFIDDVTTIAKLTPEQRQ 178
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
T+LFSAT+ ++ ++ L P+R+ + N A ++QE N
Sbjct: 179 TLLFSATIDKQLSHVIRHLLKNPIRIDLSNEKISAPKIKQELYRVKN 225
>gi|407685080|ref|YP_006800254.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str.
'English Channel 673']
gi|407246691|gb|AFT75877.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str.
'English Channel 673']
Length = 483
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 133/225 (59%), Gaps = 2/225 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKAI + P+PIQ IP L G+D+ A TGTGKTA F LPIL+
Sbjct: 2 SFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPILQ 61
Query: 152 RLL-YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ +P N R L+L PTREL QV + R ++F ++ A+ GG+ + Q LR
Sbjct: 62 RLMEGQPVSGNNVRALILTPTRELAAQVEESIRAFSEFLPLKTAVVFGGVGINPQMMKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLD L+ + S +EVLVLDEADRMLD F +K +++L + RQ
Sbjct: 122 KGVDVLIATPGRLLD-LYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPQERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
++LFSAT +D + L PV + + ++Q V+
Sbjct: 181 SLLFSATFSDEITALAKTITRNPVSISTAPANTTVEAVQQHLVTI 225
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 140/242 (57%), Gaps = 10/242 (4%)
Query: 102 LLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQ 161
L +A L + PT IQ IPVAL G D+ G A TG+GKT AF LPIL+ LL KP Q
Sbjct: 50 LCEACEQLKWKTPTKIQKEAIPVALQGSDVIGLAETGSGKTGAFALPILQTLLDKP---Q 106
Query: 162 NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPG 221
LVL PTREL Q+ + L ++ A+ VGG+++ Q +L K P IVIATPG
Sbjct: 107 RLYALVLTPTRELAFQISEQFEALGASIGIKCAVIVGGIDMMTQSLMLAKKPHIVIATPG 166
Query: 222 RLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDA 281
RL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I++ R R T+LFSATMT
Sbjct: 167 RLVDHLENTKGFNLRSLKYLVMDEADRILNMDFEQEVDKILKAIPRERNTLLFSATMTKK 226
Query: 282 VNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVLG---LMLLRE 334
V L SL PVRV V + ++ L+Q + V F ++ V + N L M+
Sbjct: 227 VAKLQRASLQNPVRVEVSSKYQTVDKLQQYYLFIPVKFKDVYLVYILNELAGNSFMVFCS 286
Query: 335 NC 336
C
Sbjct: 287 TC 288
>gi|410904152|ref|XP_003965556.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Takifugu
rubripes]
Length = 863
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K + Y PTPIQ TIPV L G+D+ A TG+GKTAAF++
Sbjct: 71 KKSGGFQSMGLSYPVYKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLI 130
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ E+ L P+ R L+L PTREL +Q + T++L +FT ++ AL +GG + Q +
Sbjct: 131 PMFEK-LKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQFA 189
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L ++E +V DEADR+ + FA Q++EIIR
Sbjct: 190 ALHENPDIIIGTPGRLM-HVIKEMNLKLHNMEYVVFDEADRLFEMGFAEQLQEIIRRFPD 248
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
TRQT+LFSAT+ + + LT PV + +D + +++ ++ F D+ L
Sbjct: 249 TRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHVRVDDKAALL--- 305
Query: 328 GLMLLR 333
L LLR
Sbjct: 306 -LYLLR 310
>gi|357500169|ref|XP_003620373.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355495388|gb|AES76591.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 502
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 153/266 (57%), Gaps = 7/266 (2%)
Query: 48 LIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIG 107
L +KK++ L KE K + +++ G+E +E SF + L L++A
Sbjct: 34 LFTQKKRRNLNKEKK----RQHQNRKSQAGREKLRMEEENKEMKSFKDLGLPESLVEACE 89
Query: 108 ALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLV 167
+ + P IQ IP AL G+D+ G A TG+GKT AF LPIL LL PR + V
Sbjct: 90 KMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHALLEAPRPNHFF-ACV 148
Query: 168 LVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV-LRKCPDIVIATPGRLLDH 226
+ PTREL +Q+ + L V+ A+ VGG+++ VQ+SV + K P I++ TPGR+LDH
Sbjct: 149 MSPTRELAIQISEQFEALGSEIGVKCAVLVGGIDM-VQQSVKIAKLPHIIVGTPGRVLDH 207
Query: 227 LHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLV 286
L NT FSL+ ++ LVLDEADR+L+E F + EI+ + R R+T LFSATMT V L
Sbjct: 208 LKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEILGMIPRERRTFLFSATMTKKVEKLQ 267
Query: 287 SVSLTRPVRVFVDNNHEVALNLRQEF 312
V L PV++ + + L+Q++
Sbjct: 268 RVCLRNPVKIETSSKYSTVDTLKQQY 293
>gi|407688996|ref|YP_006804169.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407292376|gb|AFT96688.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 483
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 133/225 (59%), Gaps = 2/225 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKAI + P+PIQ IP L G+D+ A TGTGKTA F LPIL+
Sbjct: 2 SFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPILQ 61
Query: 152 RLL-YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ +P N R L+L PTREL QV + R ++F ++ A+ GG+ + Q LR
Sbjct: 62 RLMEGQPVSGNNVRALILTPTRELAAQVEESIRAFSEFLPLKTAVVFGGVGINPQMMKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLD L+ + S +EVLVLDEADRMLD F +K +++L + RQ
Sbjct: 122 KGVDVLIATPGRLLD-LYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPQERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
++LFSAT +D + L PV + + ++Q V+
Sbjct: 181 SLLFSATFSDEITALAKTITRNPVSISTAPANTTVEAVQQHLVTI 225
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 133/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + ++ L KA L + PT IQ IPVAL GRD+ G A TG+GKT AF LPIL+
Sbjct: 25 SFKDLGVTDVLCKACDQLGWKVPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFALPILQ 84
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + L V+ + VGG++ Q L K
Sbjct: 85 ALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQTTVIVGGIDTMSQSLALAK 141
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R R+T
Sbjct: 142 KPHVIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKT 201
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 202 FLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 135/240 (56%), Gaps = 7/240 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + L PLL+A+ L Y PT IQA +P AL GRDI G A+TG+GKTAAF LPI++
Sbjct: 16 SFKSIGLIDPLLEAVEQLGYKTPTDIQAEALPHALEGRDIIGVASTGSGKTAAFALPIIQ 75
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P+ V+ PTREL Q+ Q L V A+ +GG++V Q L K
Sbjct: 76 ALWNDPK---GLFACVIAPTRELAYQISQQFEALGSGIGVRCAVIIGGMDVVSQSIALAK 132
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL HL NT FSL ++ VLDEADR+LD F + +I+++ + R T
Sbjct: 133 KPHIIVATPGRLNYHLENTKGFSLRGLKFFVLDEADRLLDMDFGPDIDKILKVIPKERTT 192
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVL 327
LFSATMT V L SL PVRV V + + L Q + +S + V L N L
Sbjct: 193 YLFSATMTTKVAKLQRASLQNPVRVEVSSKYSTVSTLLQYYLFMPLSHKEVHLVNLANTL 252
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 18/290 (6%)
Query: 51 KKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDA----------PPVE-ENSSFHQMNLS 99
KK +++ K+ LKQ + +E +E+ G + + P E + ++F ++NL
Sbjct: 17 KKLAEKIKKQALLKQKQLQESKESSDGDKTASSSVAATTETTIDPDAELKFNTFAELNLV 76
Query: 100 RPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRD 159
LL+AI + + PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL+ L +
Sbjct: 77 PDLLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAVTGSGKTAAFAIPILQALWHAQTP 136
Query: 160 DQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIAT 219
LVL PTREL Q+ L + VGG+++ Q L + P IV+AT
Sbjct: 137 YFG---LVLAPTRELAFQIKDTFDALGTTMGLRSVCIVGGMDMMDQARDLMRKPHIVVAT 193
Query: 220 PGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMT 279
PGR++DHL +T FSL +++ LV+DEADR+LD F + +I+++ R T LFSATMT
Sbjct: 194 PGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPPKRTTYLFSATMT 253
Query: 280 DAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV----SFSNIDEVRLYN 325
+ + L SL PVRV V ++ A NL Q + + N + L N
Sbjct: 254 NKIEKLQRASLHNPVRVAVSTKYQTADNLVQSMMLVNDGYKNTILIHLLN 303
>gi|254581554|ref|XP_002496762.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
gi|238939654|emb|CAR27829.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
Length = 494
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 146/236 (61%), Gaps = 19/236 (8%)
Query: 64 KQVEAEEYEENEGGKEFFEDAPPVEENS-----SFHQMNLSRPLLKAIGALNYIYPTPIQ 118
K+ EE EEN D EE+S +F ++ LS+P LKAI + + T +Q
Sbjct: 6 KKRNREEAEEN--------DVEQHEESSEKLSQTFGELELSQPTLKAIDKMGFTTMTSVQ 57
Query: 119 AATIPVALLGRDICGCAATGTGKTAAFMLPILERL---LYKPRDDQNTRVLVLVPTRELG 175
A TIP L GRD+ G A TG+GKT AF++P +ERL +KPR+ T V+V+ PTREL
Sbjct: 58 ARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIERLHSLKFKPRN--GTGVIVITPTRELA 115
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
+Q++ V R+L +F S + +GG + + L K +++IATPGRLLDHL NT F
Sbjct: 116 LQIFGVARELMEFHSQTFGIVIGGANRRQEADKLVKGVNLLIATPGRLLDHLQNTKGFVF 175
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSL 290
+++ L++DEADR+L+ F +M++II+ L + RQ+MLFSAT T V DL +SL
Sbjct: 176 KNLKALIIDEADRILEIGFEEEMRQIIKILPNEDRQSMLFSATQTTKVEDLARISL 231
>gi|393760514|ref|ZP_10349324.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393161371|gb|EJC61435.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 487
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 128/210 (60%), Gaps = 4/210 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L+ PLL+A+ Y +PTPIQA IP + G D+ A TGTGKTA F LPIL
Sbjct: 6 TFAALGLAEPLLRAVTDAGYTHPTPIQAQAIPKVIEGGDLLAAAQTGTGKTAGFTLPILH 65
Query: 152 RLLYKPRDDQN---TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
RLL P+ ++ R L+L PTREL QV + R +Q T + + GG+ + Q
Sbjct: 66 RLLNNPQQNRKPGRPRALILAPTRELAAQVEESVRLYSQHTRLRSMVMFGGVNINPQFHA 125
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
LRK DI++ATPGRLLDH+ + L+ +E+LVLDEADRMLD F +++II L
Sbjct: 126 LRKPLDILVATPGRLLDHVRQR-TVDLTGVEILVLDEADRMLDMGFIRDIRKIISLMPVE 184
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
RQT+LFSAT +D + +L SL P V V
Sbjct: 185 RQTLLFSATFSDEIRELARGSLNNPDEVAV 214
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ +S+PL A L + P+ IQ A +P AL G+D+ G A TG+GKT AF +P+L+
Sbjct: 45 TFAELGVSQPLCDACLRLGWTKPSKIQQAALPHALEGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ Q L + VA+ VGG+++ Q L +
Sbjct: 105 SLLDHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIVAVIVGGVDMAAQAMALAR 161
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRL+DHL NT F+L ++ L++DEADR+L+ F ++ +I+++ + R+T
Sbjct: 162 RPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPKERRT 221
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
LFSATMT V+ L SL P RV + ++ NL+Q ++ N
Sbjct: 222 YLFSATMTKKVSKLERASLRDPARVSISTRYKTVDNLKQHYIFIPN 267
>gi|442314863|ref|YP_007356166.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
gi|441483786|gb|AGC40472.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
Length = 376
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 137/237 (57%), Gaps = 2/237 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q++LS P+LKAI Y PT IQ IP L GRD+ GCA TGTGKTAAF +P+L+
Sbjct: 7 NFTQLSLSSPILKAISDAGYTTPTAIQEKAIPTILEGRDLIGCAQTGTGKTAAFSIPLLQ 66
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P+ ++ R L+L PTREL +Q+ + Q ++F +++ GG+ QE L +
Sbjct: 67 ILSETPKKGKSVRALILTPTRELAIQIQENIEQYSKFLNIKHLSIFGGVPQGKQERALNQ 126
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI+IATPGRLLD L SLS IE+LVLDEADRMLD F + +K+I+ + RQT
Sbjct: 127 GVDILIATPGRLLD-LMQQGLLSLSQIEILVLDEADRMLDMGFVNDVKKILTKVPKKRQT 185
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY-NVL 327
+ FSATM +++ L P V V A + Q D+ L N+L
Sbjct: 186 LFFSATMPNSIRQFAETILDNPAEVTVTPVSSTAKTIEQSVYFVEKNDKTNLLINIL 242
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 145/256 (56%), Gaps = 10/256 (3%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E+ ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GKT AF L
Sbjct: 52 EQKLTWKDLGLNETLCQACEELKWKAPSKIQKEAIPVALQGKDVIGLAETGSGKTGAFAL 111
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + L ++ + VGG+++ Q
Sbjct: 112 PILQALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGL 168
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I+++ R
Sbjct: 169 QLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPR 228
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRL 323
R+T LFSATMT V L SL PV+V V N ++ L+Q + V + ++ V +
Sbjct: 229 ERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHI 288
Query: 324 YNVLG---LMLLRENC 336
N L M+ C
Sbjct: 289 LNELAGNSFMIFCSTC 304
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 135/236 (57%), Gaps = 5/236 (2%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P +F + + +++A + + +PTPIQ +IP AL RD+ G A TG+GKTAAF
Sbjct: 104 PTGSTIAFSDLGVIPQIVEACTNMGFKHPTPIQVKSIPEALQSRDVIGLAQTGSGKTAAF 163
Query: 146 MLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
+PIL+ L P+ VL PTREL Q+ Q L V A VGG+++ Q
Sbjct: 164 TIPILQALWDNPKP---FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQ 220
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC 265
L K P +++ATPGRL DHL NT FSL ++ LV+DEADR+LD F + ++++
Sbjct: 221 SIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSI 280
Query: 266 SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSNID 319
R R+TMLFSATMT V L SL PVRV VD + L+Q F+ F++ D
Sbjct: 281 PRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYLFMPFAHKD 336
>gi|412993031|emb|CCO16564.1| predicted protein [Bathycoccus prasinos]
Length = 910
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 139/226 (61%), Gaps = 1/226 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M+L + +AI Y PTPIQ IPV G D+ A TG+GKTAAF++
Sbjct: 66 QKSGGFESMDLPPDIFRAIKRKGYRLPTPIQRKAIPVISTGVDVVAMARTGSGKTAAFVV 125
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L L K R L+L PTREL +Q + VTR +A+FT + + VGG +++Q
Sbjct: 126 PVLA-ALQKHSLRNGARALILAPTRELALQTFAVTRDMAKFTDLRLCALVGGDSMEMQFE 184
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L PD+++ATPGR+L H + SFSL +E +VLDEADR+L+ F Q+ EI++ S+
Sbjct: 185 DLANNPDVIVATPGRVLHHTNEIESFSLRLVEKVVLDEADRLLEMGFQEQLSEIMKKVSQ 244
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+RQT+LFSAT+ A+ + V V L P + +D+ +++ +LR F
Sbjct: 245 SRQTLLFSATLPSALAEFVKVGLREPRVIRLDSEMKISEDLRLTFA 290
>gi|330817865|ref|YP_004361570.1| ATP-dependent RNA helicase [Burkholderia gladioli BSR3]
gi|327370258|gb|AEA61614.1| Putative ATP-dependent RNA helicase 2 [Burkholderia gladioli BSR3]
Length = 485
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 6/235 (2%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
D+ +++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTG
Sbjct: 1 MSDSAATSVDATFDQFGLAPDILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTG 60
Query: 141 KTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
KTA+F LPI++RLL + + R L+L PTREL QV A+ T++ A+
Sbjct: 61 KTASFSLPIIQRLLPQANSSASPARHPVRALILTPTRELADQVAANVHAYAKHTALRSAV 120
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
GG+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F
Sbjct: 121 VFGGVDMNSQMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQMLVLDEADRMLDMGFL 179
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ I+ L + RQT+LFSAT + + L S L+ P + V ++ A N+ Q
Sbjct: 180 PDLQRILNLLPKQRQTLLFSATFSPEIKKLASTYLSNPQTIEVARSNATATNVTQ 234
>gi|170592549|ref|XP_001901027.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591094|gb|EDP29707.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 452
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 101/119 (84%)
Query: 195 LSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHF 254
L+ GGL++K QE+ LR+ PDIVIATPGRL+DHLHN P+FSL+D+E+LVLDEADRMLDE F
Sbjct: 18 LANGGLDLKTQEAALRQRPDIVIATPGRLIDHLHNAPNFSLADVEILVLDEADRMLDEAF 77
Query: 255 ASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ QMKEI+ LC+R RQTMLFSATMTD + +L +VSL PV++F+ N E ALNLRQEFV
Sbjct: 78 SIQMKEIMHLCARNRQTMLFSATMTDQIEELAAVSLKNPVKLFISGNTETALNLRQEFV 136
>gi|452877593|ref|ZP_21954868.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa VRFPA01]
gi|452185681|gb|EME12699.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa VRFPA01]
Length = 447
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L PTPIQA IP AL GRD+ A TGTGKTAAF LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGLHTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAAFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHGSIRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK D+++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDVLVATPGRLLD-LYRQNAVQFARLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLAGELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|297794203|ref|XP_002864986.1| hypothetical protein ARALYDRAFT_496826 [Arabidopsis lyrata subsp.
lyrata]
gi|297310821|gb|EFH41245.1| hypothetical protein ARALYDRAFT_496826 [Arabidopsis lyrata subsp.
lyrata]
Length = 591
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N +F ++LS K++ + + T IQA IP ++G+D+ G A TG+GKT AF++P
Sbjct: 112 NETFESLSLSDNTYKSVKEMGFARMTQIQAKAIPPLMMGKDVLGAARTGSGKTLAFLIPA 171
Query: 150 LERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
E L + PR+ T V+V+ PTREL +Q Y V ++L ++ S V +GG K +
Sbjct: 172 AELLYHVRFTPRN--GTGVIVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGENRKKEA 229
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+L K ++++ATPGRLLDHL NT F ++++ V+DEADR+L+++F +K+II+L
Sbjct: 230 EILAKGVNLLVATPGRLLDHLENTNGFVFKNLKLFVMDEADRILEQNFEEDLKKIIKLLP 289
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
+TRQT LFSAT + V DL VSL PV + VD + N
Sbjct: 290 KTRQTSLFSATQSAKVEDLARVSLASPVYIDVDEGRQKVTN 330
>gi|152986565|ref|YP_001346544.1| ATP-dependent RNA helicase [Pseudomonas aeruginosa PA7]
gi|150961723|gb|ABR83748.1| probable ATP-dependent RNA helicase [Pseudomonas aeruginosa PA7]
Length = 447
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/235 (44%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLLKA+ L PTPIQA IP AL GRD+ A TGTGKTAAF LP+L+
Sbjct: 2 TFASLGLLDPLLKALEGLGLHTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAAFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL L P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 RLTLEGPQVAANSVRALVLVPTRELAEQVHGSIRDYGQHLPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK D+++ATPGRLLD L+ + + ++ LVLDEADRMLD FA ++ E+ R R
Sbjct: 122 RKGVDVLVATPGRLLD-LYRQNAVQFARLQALVLDEADRMLDLGFARELDELFAALPRKR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +DA+ L L P+ + V + A ++RQ V + L+
Sbjct: 181 QTLLFSATFSDAIRTLAGELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELF 235
>gi|348618050|ref|ZP_08884583.1| ATP-dependent RNA helicase rhlE [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816755|emb|CCD29246.1| ATP-dependent RNA helicase rhlE [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 427
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 133/227 (58%), Gaps = 10/227 (4%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
S F L LLK+I Y PTPIQ IP AL GRD+ G A TGTGKTA F LPIL
Sbjct: 6 SHFSHFGLHDDLLKSIAEQGYAVPTPIQVHAIPAALAGRDVMGAAQTGTGKTAGFSLPIL 65
Query: 151 ERLLYKPRDDQN-------TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
+RLL P + + R L+L PTREL QV R AQ+T + GG+++K
Sbjct: 66 QRLL--PLANASVSPARHPVRALILTPTRELADQVAANIRAYAQYTLLRSLAVFGGVDMK 123
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q LR+ +I++ATPGRLLDHL + L +LVLDEADRMLD F +++I+
Sbjct: 124 AQAGELRRGVEILVATPGRLLDHLEQK-NLQLGQTGILVLDEADRMLDMGFLPDLQKILA 182
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
R RQT+LFSAT +D + +L + L PV + ++ + A+N+RQ
Sbjct: 183 ALPRERQTLLFSATFSDEIRNLAAYYLNDPVSIEIETRNATAVNVRQ 229
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 134/227 (59%), Gaps = 3/227 (1%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
V E +F + ++ L A L + PT IQ IP+AL GRDI G A TG+GKT AF
Sbjct: 21 VPETKTFKDLGVTDVLCDACDQLGWKTPTKIQIEAIPMALDGRDIIGLAETGSGKTGAFA 80
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
LPIL LL P Q LVL PTREL Q+ + L VE A+ VGG++ Q
Sbjct: 81 LPILNALLDTP---QRFFALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQS 137
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I++L
Sbjct: 138 LALAKKPHVIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKLIP 197
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 198 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 244
>gi|120609836|ref|YP_969514.1| DEAD/DEAH box helicase [Acidovorax citrulli AAC00-1]
gi|120588300|gb|ABM31740.1| DEAD/DEAH box helicase domain protein [Acidovorax citrulli AAC00-1]
Length = 489
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF ++L+ PL +A+ + Y TPIQA IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLSLAEPLARAVAEMGYTSMTPIQAEAIPVVLTGQDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+RLL + R LVL+PTREL QV Q A++T + + GG+++K
Sbjct: 62 LQRLLKHENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTLELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSY 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR-L 323
+TR T+LFSAT + + L L PV + V +E A + Q F S ++ D+ R +
Sbjct: 181 LPKTRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQRFYSVNDDDKRRAI 240
Query: 324 YNVL 327
++VL
Sbjct: 241 HHVL 244
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + PV EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG
Sbjct: 104 ETSQPVVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETG 163
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 164 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 220
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 221 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 280
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 281 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 335
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 140/242 (57%), Gaps = 3/242 (1%)
Query: 72 EENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDI 131
EE + + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 8 EEPDSPSGALQTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDI 67
Query: 132 CGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V
Sbjct: 68 IGLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGV 124
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
+ A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 125 QCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN 184
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE 311
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q
Sbjct: 185 MDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 244
Query: 312 FV 313
++
Sbjct: 245 YL 246
>gi|91782534|ref|YP_557740.1| ATP-dependent RNA helicase 2 [Burkholderia xenovorans LB400]
gi|91686488|gb|ABE29688.1| Putative ATP-dependent RNA helicase 2 [Burkholderia xenovorans
LB400]
Length = 491
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 138/235 (58%), Gaps = 6/235 (2%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
D P S+F Q L+ +LKA+ Y PTPIQ IPV L GRD+ G A TGTG
Sbjct: 1 MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTG 60
Query: 141 KTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
KTA+F LPI++RLL + + R L+L PTREL QV + A+ T++ A+
Sbjct: 61 KTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAV 120
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
GG+++ Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F
Sbjct: 121 VFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFL 179
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ I+ L + RQT+LFSAT + + L + L P + V ++ A N+RQ
Sbjct: 180 PDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVRQ 234
>gi|409200280|ref|ZP_11228483.1| ATP-dependent RNA helicase [Pseudoalteromonas flavipulchra JG1]
Length = 411
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 145/246 (58%), Gaps = 5/246 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ L LL AI L + PTPIQ +IP+ L G D+ A TGTGKTAAFMLPIL
Sbjct: 2 TFSELQLHPELLSAITELGFASPTPIQEKSIPLLLSGCDLIASAQTGTGKTAAFMLPILH 61
Query: 152 RLLYKP-RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+L + +++ + L+L PTREL QV + T +L TS+ V GG + QE LR
Sbjct: 62 SMLIGATQGEKSVKALILTPTRELAQQVAEHTEKLVVNTSLNVVCLYGGANIGPQEKRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
D+V+ATPGRLLDHL + +L +I+ LV DEADRMLD F ++K I+R RQ
Sbjct: 122 AGVDVVVATPGRLLDHLIKG-TLTLKNIQHLVFDEADRMLDMGFMGEIKRIMRTMPLKRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
T+LFSAT+ DAV V L P RV V++ + A + Q F S +DE R ++ +
Sbjct: 181 TLLFSATVDDAVLSQVKPWLNDPKRVGVESQNSTASTVTQTFYS---VDEDRKRELIAHL 237
Query: 331 LLRENC 336
+ + N
Sbjct: 238 IGKNNW 243
>gi|407452329|ref|YP_006724054.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
gi|403313313|gb|AFR36154.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
Length = 371
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 137/237 (57%), Gaps = 2/237 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q++LS P+LKAI Y PT IQ IP L GRD+ GCA TGTGKTAAF +P+L+
Sbjct: 2 NFTQLSLSSPILKAISDAGYTTPTAIQEKAIPTILEGRDLIGCAQTGTGKTAAFSIPLLQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P+ ++ R L+L PTREL +Q+ + Q ++F +++ GG+ QE L +
Sbjct: 62 ILSETPKKGKSIRALILTPTRELAIQIQENIEQYSKFLNIKHLSIFGGVPQGKQERALNQ 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI+IATPGRLLD L SLS IE+LVLDEADRMLD F + +K+I+ + RQT
Sbjct: 122 GVDILIATPGRLLD-LMQQGLLSLSQIEILVLDEADRMLDMGFVNDVKKILTKVPKKRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY-NVL 327
+ FSATM +++ L P V V A + Q D+ L N+L
Sbjct: 181 LFFSATMPNSIRQFAETILDNPAEVTVTPVSSTAKTIEQSVYFVEKNDKTNLLINIL 237
>gi|241956021|ref|XP_002420731.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223644073|emb|CAX41816.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 556
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 179/298 (60%), Gaps = 20/298 (6%)
Query: 10 KEDKEDNEGSEEDDVDAEEDFALPDDEMKH---DNIKNRQKLIGKKKQKRLAKEGKLKQV 66
K ED+E ED+ E+ DE+ D+I++ + KK+K+ AK+ +
Sbjct: 22 KRSHEDSESEVEDNEKVVEELDADFDEVAGLLGDDIEDPESKSQSKKEKQKAKD----EA 77
Query: 67 EAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
+ E+ + + KE ED EN F +LS P ++AI + + T +QA TIP L
Sbjct: 78 KLEKLTKPQVSKEITEDD---SENVLFENADLSEPTMRAIKEMGFTKMTKVQAKTIPPLL 134
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLY----KPRDDQNTRVLVLVPTRELGVQVYQVT 182
GRD+ G A TG+GKT AF++P +E LLY KPR+ T V+++ PTREL +Q++ V
Sbjct: 135 AGRDVLGAAKTGSGKTLAFLIPAIE-LLYSLKIKPRN--GTAVIIITPTRELALQIFGVA 191
Query: 183 RQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLV 242
R+L QF S + +GG + + + + L K ++++ATPGRLLDHL NT F S+++ LV
Sbjct: 192 RELMQFHSQTCGIVIGGADRRQEATKLSKGVNLLVATPGRLLDHLKNT-QFVFSNLKALV 250
Query: 243 LDEADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
+DEADR+L+ F +MK+II+ L + RQ+MLFSAT T V DL +SL RP ++++
Sbjct: 251 IDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQTTKVEDLARISL-RPGPLYIN 307
>gi|379725028|ref|YP_005317159.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|386727777|ref|YP_006194103.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|378573700|gb|AFC34010.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384094902|gb|AFH66338.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
Length = 422
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 133/222 (59%), Gaps = 4/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q+ L P++KA+ NY PTPIQ IP L GRD+ GCA TGTGKTAAF+LPI++
Sbjct: 2 TFQQLQLIPPIIKALAKENYTQPTPIQEQAIPPVLAGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 152 RLLY---KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L +P + R L+L PTREL +Q+ + FT++ + VGG+ + QE +
Sbjct: 62 LLSTQQGRPNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNLRYGVIVGGVSQRPQEQL 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L + DI+IATPGRL+D L N LS +++LVLDEADRMLD F MK II
Sbjct: 122 LEQGMDILIATPGRLID-LMNQGFVDLSHVQILVLDEADRMLDMGFIHDMKRIIAKLPVK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
RQT+ FSATM + LV+ L PV++ + A ++Q
Sbjct: 181 RQTLFFSATMPPEITSLVNSLLKNPVKIEITPVSSTAERIKQ 222
>gi|109095726|ref|XP_001086008.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Macaca mulatta]
Length = 406
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 138/235 (58%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + PV EE +F + ++ L +A L + PT I IP+AL GRDI G A TG
Sbjct: 12 EASQPVMEEEETKTFKDLGVTDVLCEACDQLGWTKPTKILIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|326315975|ref|YP_004233647.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372811|gb|ADX45080.1| DEAD/DEAH box helicase domain protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 491
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 146/244 (59%), Gaps = 7/244 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF ++L+ PL +A+ + Y TPIQA IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLSLAEPLARAVAEMGYTSMTPIQAEAIPVVLTGQDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+RLL + R LVL+PTREL QV Q A++T + + GG+++K
Sbjct: 62 LQRLLKHENSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTLELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSY 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR-L 323
+TR T+LFSAT + + L L PV + V +E A + Q F S ++ D+ R +
Sbjct: 181 LPKTRTTLLFSATFSPEIKRLAGSYLQNPVTIEVARPNETASTVEQRFYSVNDDDKRRAI 240
Query: 324 YNVL 327
++VL
Sbjct: 241 HHVL 244
>gi|367016289|ref|XP_003682643.1| hypothetical protein TDEL_0G00650 [Torulaspora delbrueckii]
gi|359750306|emb|CCE93432.1| hypothetical protein TDEL_0G00650 [Torulaspora delbrueckii]
Length = 485
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 145/229 (63%), Gaps = 11/229 (4%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F +NLS +KA+ + + TP+QA TIP L GRD+ G A TG+GKT AF++P +ER
Sbjct: 23 FSGLNLSDATMKAVEKMGFSSMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIER 82
Query: 153 L---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + + L
Sbjct: 83 LHSLKFKPRN--GTGVIVITPTRELALQIFGVARELMEFHSQTYGIVIGGANRRQEADKL 140
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRT 268
K +++IATPGRLLDHL NT F +++ LV+DEADR+L+ F +M++II+ L +
Sbjct: 141 AKGVNMLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMRQIIKILPNDD 200
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEFV 313
RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +V
Sbjct: 201 RQSMLFSATQTTKVEDLARISL-RPGPLFINVVSEKDNSTADGLEQGYV 248
>gi|337752121|ref|YP_004646283.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336303310|gb|AEI46413.1| DEAD/DEAH box helicase domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 422
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 133/222 (59%), Gaps = 4/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q+ L P++KA+ NY PTPIQ IP L GRD+ GCA TGTGKTAAF+LPI++
Sbjct: 2 TFQQLELIPPIIKALAKENYTQPTPIQEQAIPPVLAGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 152 RLLY---KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L +P + R L+L PTREL +Q+ + FT++ + VGG+ + QE +
Sbjct: 62 LLSTQQGRPNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNLRYGVIVGGVSQRPQEQL 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L + DI+IATPGRL+D L N LS +++LVLDEADRMLD F MK II
Sbjct: 122 LEQGMDILIATPGRLID-LMNQGFVDLSHVQILVLDEADRMLDMGFIHDMKRIIAKLPVK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
RQT+ FSATM + LV+ L PV++ + A ++Q
Sbjct: 181 RQTLFFSATMPPEITSLVNSLLKNPVKIEITPVSSTAERIKQ 222
>gi|340372039|ref|XP_003384552.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Amphimedon queenslandica]
Length = 451
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 147/249 (59%), Gaps = 10/249 (4%)
Query: 68 AEEYEENEGG-KEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVAL 126
AEE E G K+ ED E +F + ++ L ++ + + PT IQ IPVAL
Sbjct: 4 AEEDTELSGTEKQIEEDGK--SEGLTFSDIGITSVLCQSCEEMGWTTPTDIQREAIPVAL 61
Query: 127 LGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRV--LVLVPTRELGVQVYQVTRQ 184
GRD+ G A TG+GKT AF LPIL+ LL D TR+ LVL PTREL Q+ +
Sbjct: 62 EGRDVIGLAETGSGKTGAFSLPILQSLL-----DTPTRLFALVLTPTRELAFQISEQFEA 116
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
L V+ A+ VGG+++ Q L K P +VIATPGRL+DHL NT FSL ++ LV+D
Sbjct: 117 LGGRIGVKCAVVVGGVDMMTQALALAKKPHVVIATPGRLVDHLENTKGFSLRSVKYLVMD 176
Query: 245 EADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEV 304
EADR+L+ F ++ +I+++ SR R+T L+SATMT V L SL P++V V ++
Sbjct: 177 EADRILNMDFGEEVDKILKVLSRERRTYLYSATMTKKVQKLQRASLHNPIKVEVSTKYQT 236
Query: 305 ALNLRQEFV 313
L+Q ++
Sbjct: 237 VDKLQQSYI 245
>gi|424778219|ref|ZP_18205170.1| ATP-dependent RNA helicase [Alcaligenes sp. HPC1271]
gi|422887047|gb|EKU29458.1| ATP-dependent RNA helicase [Alcaligenes sp. HPC1271]
Length = 487
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 128/210 (60%), Gaps = 4/210 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L+ PLL+A+ Y +PTPIQA IP + G D+ A TGTGKTA F LPIL
Sbjct: 6 TFASLELAEPLLRAVTDAGYTHPTPIQAQAIPKVIEGGDLLAAAQTGTGKTAGFTLPILH 65
Query: 152 RLLYKPRDDQN---TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
RLL P+ ++ R L+L PTREL QV + R +Q T + + GG+ + Q
Sbjct: 66 RLLNNPQQNRKPGRPRALILAPTRELAAQVEESVRLYSQHTRLRSMVMFGGVNINPQFHA 125
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
LRK DI++ATPGRLLDH+ + L+ +E+LVLDEADRMLD F +++II L
Sbjct: 126 LRKPLDILVATPGRLLDHVRQR-TVDLTGVEILVLDEADRMLDMGFIRDIRKIISLMPVD 184
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
RQT+LFSAT +D + +L SL P V V
Sbjct: 185 RQTLLFSATFSDEIRELARGSLNNPDEVAV 214
>gi|357013855|ref|ZP_09078854.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 433
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 132/224 (58%), Gaps = 4/224 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q+ L P+LKA+ NY PTPIQ IP L GRD+ GCA TGTGKTAAF+LPI++
Sbjct: 2 TFEQLKLIPPILKALAKENYTQPTPIQEQAIPPVLAGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 152 RLLYKPRDDQNTRV---LVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L + R RV L+L PTREL +Q+ + +F ++ A+ VGG+ K QE
Sbjct: 62 LLSAQQRRPSGKRVIRSLILTPTRELAIQISDNFKAYGRFLNLRSAVIVGGVSQKAQEQA 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L + DI+IATPGRL+D L N L +++LVLDEADRMLD F M+ II
Sbjct: 122 LEQGMDILIATPGRLID-LMNQGFADLRHVQILVLDEADRMLDMGFIHDMRRIIAKLPAK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
RQT+ FSATM + LV LT P+++ + A ++Q
Sbjct: 181 RQTLFFSATMPPEITSLVDSLLTNPMKIEITPVSSTAERIKQSL 224
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 17 EEIKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 76
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q
Sbjct: 77 PILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSL 133
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 134 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 193
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 194 DRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 239
>gi|6323947|ref|NP_014017.1| ATP-dependent RNA helicase HAS1 [Saccharomyces cerevisiae S288c]
gi|2500537|sp|Q03532.1|HAS1_YEAST RecName: Full=ATP-dependent RNA helicase HAS1; AltName:
Full=Helicase associated with SET1 protein 1
gi|530347|emb|CAA56799.1| RNA helicase [Saccharomyces cerevisiae]
gi|151945998|gb|EDN64230.1| helicase associated with set1 [Saccharomyces cerevisiae YJM789]
gi|190408516|gb|EDV11781.1| RNA-dependent helicase [Saccharomyces cerevisiae RM11-1a]
gi|207342060|gb|EDZ69940.1| YMR290Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270688|gb|EEU05851.1| Has1p [Saccharomyces cerevisiae JAY291]
gi|259148878|emb|CAY82123.1| Has1p [Saccharomyces cerevisiae EC1118]
gi|285814296|tpg|DAA10191.1| TPA: ATP-dependent RNA helicase HAS1 [Saccharomyces cerevisiae
S288c]
gi|323346981|gb|EGA81258.1| Has1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353213|gb|EGA85513.1| Has1p [Saccharomyces cerevisiae VL3]
gi|349580582|dbj|GAA25742.1| K7_Has1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297463|gb|EIW08563.1| Has1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 505
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 14/241 (5%)
Query: 84 APPVEENS---SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
AP E+ + F ++ LS+P LKAI + + T +QA TIP L GRD+ G A TG+G
Sbjct: 32 APEGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSG 91
Query: 141 KTAAFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
KT AF++P +L L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +
Sbjct: 92 KTLAFLIPAIELLHSLKFKPRN--GTGIIVITPTRELALQIFGVARELMEFHSQTFGIVI 149
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG + + L K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +
Sbjct: 150 GGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDE 209
Query: 258 MKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEF 312
M++II+ L + RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +
Sbjct: 210 MRQIIKILPNEDRQSMLFSATQTTKVEDLARISL-RPGPLFINVVPETDNSTADGLEQGY 268
Query: 313 V 313
V
Sbjct: 269 V 269
>gi|84468282|dbj|BAE71224.1| putative replication protein A1 [Trifolium pratense]
Length = 440
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 132/224 (58%), Gaps = 1/224 (0%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E SF + L L++A L + P IQ IP+AL G+D+ G A TG+GKT AF LP
Sbjct: 7 EMKSFKDLGLPEELVEACDNLGWKTPLKIQIEAIPLALQGKDVIGLAQTGSGKTGAFALP 66
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
IL LL PR + + VL PTREL +Q+ + L V+ A+ VGG+++ Q
Sbjct: 67 ILHALLQAPRPN-HFFACVLSPTRELAIQISEQFEALGSGIGVKSAVLVGGIDMVQQSIK 125
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
+ K P I++ TPGR+LDHL NT FSLS ++ LVLDEADR+L+E F + EI+ + R
Sbjct: 126 IAKHPHIIVGTPGRVLDHLKNTKGFSLSKLKYLVLDEADRLLNEDFEESLNEILGMIPRE 185
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
R+T LFSATMT V L V L PV++ + L+Q++
Sbjct: 186 RRTFLFSATMTKKVEKLQRVCLRNPVKIEASTKYSTVDTLKQQY 229
>gi|381150962|ref|ZP_09862831.1| DNA/RNA helicase, superfamily II [Methylomicrobium album BG8]
gi|380882934|gb|EIC28811.1| DNA/RNA helicase, superfamily II [Methylomicrobium album BG8]
Length = 425
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 135/222 (60%), Gaps = 4/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKA+ Y+ PTPIQ TIP+ L GRD+ A TGTGKTA+F LP+L+
Sbjct: 2 SFAQLGLAAPLLKAVAEQGYVTPTPIQQQTIPLILDGRDVLAGAQTGTGKTASFTLPLLQ 61
Query: 152 RLLY---KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
RL KP+ + R L+L PTREL QV+ R + + + VGG+ + Q
Sbjct: 62 RLAESNDKPQKPRKIRALILAPTRELAAQVHDSVRAYGKHLPLFAEVVVGGVSINGQIRS 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L++ DIV+ATPGRLLDHL + LS +E+LVLDEADRMLD F +++II R
Sbjct: 122 LQRGCDIVVATPGRLLDHLLQK-NIELSHLEILVLDEADRMLDMGFLPDIRKIIGHLPRQ 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+Q++LFSAT + + L L P V V ++ A N+++
Sbjct: 181 KQSLLFSATFPEEIRGLAKQLLHEPAEVSVAPHNTTADNIKE 222
>gi|254428748|ref|ZP_05042455.1| DEAD/DEAH box helicase domain protein [Alcanivorax sp. DG881]
gi|196194917|gb|EDX89876.1| DEAD/DEAH box helicase domain protein [Alcanivorax sp. DG881]
Length = 450
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 145/229 (63%), Gaps = 2/229 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF +NL L+KA+G L PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L
Sbjct: 2 SSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPML 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+LL R +TR L+L+PTREL Q + L ++T ++ L GG + KVQ + +R
Sbjct: 62 HQLLQYSRPRTDTRALILLPTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K P+I+I TPGRL++HL + + L D+E+LVLDE+DRMLD F + + C RQ
Sbjct: 122 KNPEILIGTPGRLIEHL-DAGNLLLQDLEMLVLDESDRMLDMGFNDDVLRLAAECRAERQ 180
Query: 271 TMLFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
T+LFSAT +A+ +++S L P + +D+ ++ ++ Q+ ++ ++
Sbjct: 181 TLLFSATTGGNAMENMISSVLRDPKSLVLDSVRDLNESVSQQIITADDV 229
>gi|409045997|gb|EKM55477.1| hypothetical protein PHACADRAFT_184272 [Phanerochaete carnosa
HHB-10118-sp]
Length = 472
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 130/220 (59%), Gaps = 3/220 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
+P +E SF + L PLL+A+ L++ PT IQ A +P AL GRDI G A+TG+GKT
Sbjct: 13 SSPAPQEKPSFKALGLIDPLLEALQQLSFTSPTDIQTAALPHALEGRDIIGVASTGSGKT 72
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AAF LPIL++L PR V+ PTREL Q+ + L V A VGG++
Sbjct: 73 AAFALPILQKLWDDPR---GLFACVIAPTRELAYQITEHFEALGSAMGVRCATVVGGIDE 129
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L K P +V+ATPGRL HL NT FSL ++ LVLDEADR+LD F + +I+
Sbjct: 130 MSQAVALAKKPHVVVATPGRLQYHLENTKGFSLRSLKFLVLDEADRLLDMDFGPILDKIL 189
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
++ + R T LFSATMT V L SL+ PVRV V +
Sbjct: 190 KVIPQERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKY 229
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 146/255 (57%), Gaps = 10/255 (3%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
EN ++ + + L +A L + PT IQ IP+ + G+D+ G A TG+GKTAAF LP
Sbjct: 22 ENLTWKDLGIVDSLCQACEDLKWKAPTKIQREAIPLTIQGKDVIGLAETGSGKTAAFALP 81
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
IL+ LL P Q L+L PTREL Q+ + L V+ + VGG+++ Q +
Sbjct: 82 ILQALLENP---QRYFALILTPTRELAFQISEQFEALGASIGVKCVVIVGGMDMMTQSLM 138
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+ R
Sbjct: 139 LAKKPHIIIATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRE 198
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLY 324
R+T+LFSATMT V L SL PV+V V ++ L+Q + V F ++ V +
Sbjct: 199 RRTLLFSATMTKKVQKLQRASLQNPVKVEVSTKYQTVEKLQQYYVFIPVKFKDVYLVHIL 258
Query: 325 NVL---GLMLLRENC 336
N L M+ C
Sbjct: 259 NELSGNSFMIFCSTC 273
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 132/217 (60%), Gaps = 3/217 (1%)
Query: 97 NLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYK 156
L PL +A L + PT IQ IPVAL G+DI G A TG+GKTAAF+LPIL+ LL K
Sbjct: 1 GLMEPLCQACDRLQWKQPTKIQCEAIPVALTGKDIIGLAETGSGKTAAFVLPILQALLDK 60
Query: 157 PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIV 216
P Q L+L PTREL Q+ + L V+ A+ +GG+++ Q +L K P I+
Sbjct: 61 P---QRLFALILTPTRELAFQISEQIEALGSSIGVQCAVIIGGIDMMTQSIMLAKKPHII 117
Query: 217 IATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSA 276
I TPGRL DHL NT FSL ++ LV+DEADR+L+ F +++ +I+ + + R+T LFSA
Sbjct: 118 IGTPGRLADHLANTKGFSLRPLKYLVMDEADRILNMDFEAEVDKILSVLPKERRTYLFSA 177
Query: 277 TMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
TMT V L S+ PV++ V + L+Q ++
Sbjct: 178 TMTKKVKKLQRASVQDPVKIEVSTKYTTVEKLQQTYI 214
>gi|212690559|ref|ZP_03298687.1| hypothetical protein BACDOR_00044 [Bacteroides dorei DSM 17855]
gi|212666908|gb|EEB27480.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
Length = 434
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A++T V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDHKKGIKALILTPTRELAIQIGENFDQYAKYTGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L LT P +V V
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPKKVEV 206
>gi|423229947|ref|ZP_17216352.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|423247037|ref|ZP_17228088.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
gi|392632157|gb|EIY26120.1| hypothetical protein HMPREF1063_02172 [Bacteroides dorei
CL02T00C15]
gi|392633650|gb|EIY27591.1| hypothetical protein HMPREF1064_04294 [Bacteroides dorei
CL02T12C06]
Length = 434
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A++T V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDHKKGIKALILTPTRELAIQIGENFDQYAKYTGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L LT P +V V
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPKKVEV 206
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 133/230 (57%), Gaps = 5/230 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + + +++A + + +PTPIQ IP AL RD+ G A TG+GKTAAF +PIL+
Sbjct: 122 SFQDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQ 181
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P+ VL PTREL Q+ Q L V A VGG+++ Q L K
Sbjct: 182 ALWDNPKP---FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSK 238
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGRL DHL NT FSL ++ LV+DEADR+LD F + ++++ R R+T
Sbjct: 239 RPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRT 298
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSNID 319
MLFSATMT V L SL PVRV VD + L+Q F+ F++ D
Sbjct: 299 MLFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYLFMPFAHKD 348
>gi|323332194|gb|EGA73605.1| Has1p [Saccharomyces cerevisiae AWRI796]
Length = 505
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 150/241 (62%), Gaps = 14/241 (5%)
Query: 84 APPVEENS---SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
AP E+ + F ++ LS+P LKAI + + T +QA TIP L GRD+ G A TG+G
Sbjct: 32 APEGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSG 91
Query: 141 KTAAFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
KT AF++P +L L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +
Sbjct: 92 KTLAFLIPAIELLHSLKFKPRN--GTGIIVITPTRELALQIFGVARELMEFHSQTFGIVI 149
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG + + L K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +
Sbjct: 150 GGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTQGFVFKNLKALIIDEADRILEIGFEDE 209
Query: 258 MKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEF 312
M++II+ L + RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +
Sbjct: 210 MRQIIKILPNEDRQSMLFSATQTTKVEDLARISL-RPGPLFINVVPETDNSTADGLEQGY 268
Query: 313 V 313
V
Sbjct: 269 V 269
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 4/210 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ LS LLKA+ YI P+PIQ IP L G+D+ GCA TGTGKTAAF LPI++
Sbjct: 2 NFDELQLSPLLLKALDQKGYIKPSPIQEQAIPYVLNGQDLLGCAQTGTGKTAAFALPIIQ 61
Query: 152 RLLYKPRDDQN---TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L+ +P++ Q R L+L PTREL +Q+++ + T + A+ GG+ K Q
Sbjct: 62 NLMERPKNRQKKKPVRALILTPTRELALQIHENIEEYGAGTPINSAVIFGGVSAKPQIQS 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
LR+ DI++ATPGRLLD L LS +E+ VLDEADRMLD F +K +I L +
Sbjct: 122 LRRGIDILVATPGRLLD-LIGQHEIDLSFVEIFVLDEADRMLDMGFIHDVKRVITLLPKK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
RQT+LFSATM D + L + L PV+V V
Sbjct: 181 RQTLLFSATMPDEIQALAAKLLHNPVKVEV 210
>gi|265754229|ref|ZP_06089418.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|423241599|ref|ZP_17222711.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
gi|263234938|gb|EEZ20493.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 3_1_33FAA]
gi|392641052|gb|EIY34840.1| hypothetical protein HMPREF1065_03334 [Bacteroides dorei
CL03T12C01]
Length = 434
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A++T V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDHKKGIKALILTPTRELAIQIGENFDQYAKYTGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L LT P +V V
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPKKVEV 206
>gi|367014487|ref|XP_003681743.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
gi|359749404|emb|CCE92532.1| hypothetical protein TDEL_0E02890 [Torulaspora delbrueckii]
Length = 501
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF +N+ LL+A LN+ PTPIQA IP AL G+DI G A TG+GKTAAF LPIL
Sbjct: 82 SFSGLNIVPELLQACKNLNFTKPTPIQAKAIPPALEGKDIIGLAQTGSGKTAAFALPILN 141
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + D +L PTREL Q+ + L VGG+ + Q L +
Sbjct: 142 RLWH---DQSPYYACILSPTRELAQQIKETFDSLGTIMGARTTCIVGGMNMMDQARDLMR 198
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQ 270
P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I+++ ++ R
Sbjct: 199 KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQGRT 258
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 259 TYLFSATMTSKIDKLQRASLTDPVKCAVSNKYQTVDTLVQTLM 301
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 138/235 (58%), Gaps = 6/235 (2%)
Query: 82 EDAPPV---EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
E + PV EE +F + ++ L +A L + PT I IP+AL GRDI G A TG
Sbjct: 12 EASQPVMEEEETKTFKDLGVTDVLCEACDQLGWTKPTKILIEAIPLALQGRDIIGLAETG 71
Query: 139 TGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+ VG
Sbjct: 72 SGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVG 128
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G++ Q L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++
Sbjct: 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 189 DKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|238028205|ref|YP_002912436.1| ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
gi|237877399|gb|ACR29732.1| Putative ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
Length = 480
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 DATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV A+ T++ A+ GG+++
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQMLVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L + LT P + V ++ A N+ Q
Sbjct: 189 LPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQ 234
>gi|406596808|ref|YP_006747938.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii ATCC 27126]
gi|406598056|ref|YP_006749186.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii ATCC 27126]
gi|406374129|gb|AFS37384.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii ATCC 27126]
gi|406375377|gb|AFS38632.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii ATCC 27126]
Length = 483
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 133/225 (59%), Gaps = 2/225 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKAI + P+PIQ IP L G+D+ A TGTGKTA F LPIL+
Sbjct: 2 SFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPILQ 61
Query: 152 RLL-YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ +P N R L+L PTREL QV + R ++F ++ A+ GG+ + Q LR
Sbjct: 62 RLMEGQPVSGNNVRALILTPTRELAAQVEESIRAFSEFLPLKTAVVFGGVGINPQMMKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLD L+ + S +EVLVLDEADRMLD F ++ +++L + RQ
Sbjct: 122 KGVDVLIATPGRLLD-LYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIRRVLKLLPQERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
++LFSAT +D + L PV + + ++Q V+
Sbjct: 181 SLLFSATFSDEITALAKTITRNPVSISTAPANTTVEAVQQHLVTI 225
>gi|403222338|dbj|BAM40470.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 470
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 158/283 (55%), Gaps = 28/283 (9%)
Query: 15 DNEGSEEDDVDAEEDFALPDDEMKHDNIKNRQKLIGKKKQKRLAKEGK-LKQVEAEEYEE 73
DNE S + D PD E++ K + +L+ +K +K G LK++E E E
Sbjct: 2 DNEYSSDSD---------PDVELE----KYKSRLMSSINRKAASKNGAGLKEIEETENEA 48
Query: 74 NEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
++G K +F + +S L +A L + PT IQ IPVAL G+DI G
Sbjct: 49 DDGKK-----------GVTFEDLGVSPELCRACKQLGWKRPTKIQVEAIPVALQGKDIIG 97
Query: 134 CAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEV 193
A TG+GKTAAF +PIL++LL KP Q L+L PTREL +Q+ + L ++V
Sbjct: 98 LAETGSGKTAAFTIPILQKLLEKP---QRLFSLILTPTRELSLQIKEQLLSLGSEIGLDV 154
Query: 194 ALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEH 253
L +GGL++ Q L K P I++ +PGR+ DHL NT FSL I+ LVLDEADR+L
Sbjct: 155 CLILGGLDMVTQALQLSKKPHIIVGSPGRVADHLQNTKGFSLETIKFLVLDEADRILSID 214
Query: 254 FASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
F + +II+ + R T L+SATMT ++ L V+L +P+ +
Sbjct: 215 FDDSLNKIIQSLPKERITYLYSATMTSKLSKLQKVTLIKPINI 257
>gi|384251134|gb|EIE24612.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 502
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 8/220 (3%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
S F ++L+ +AI + + + T +QA TIP L GRD+ G A TG+GKT AF++P L
Sbjct: 4 SEFSSLDLTEQTQRAIAEMGFTHMTEVQARTIPHLLTGRDVLGAAKTGSGKTLAFLVPCL 63
Query: 151 ERLLYK----PRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
E LL+K PR+ T L++ PTREL +Q+Y V R L Q S L +GG + +
Sbjct: 64 E-LLHKAKFMPRN--GTGALIISPTRELAMQIYSVARDLLQHHSQTHGLIMGGANRRTEA 120
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K ++++ATPGRLLDHL NT F S++ LV+DEADR+L+ F +M++I+R+
Sbjct: 121 EKLVKGVNLIVATPGRLLDHLQNTKGFVYSNLACLVIDEADRILEIGFEEEMRQIVRILP 180
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTR-PVRVFVDNNHEVA 305
+ RQTMLFSAT T V DL +S R P+ V VD+ E A
Sbjct: 181 KDRQTMLFSATQTTKVEDLARLSFKRQPLYVGVDDKQEAA 220
>gi|89072882|ref|ZP_01159439.1| putative ATP-dependent RNA helicase RhlE [Photobacterium sp. SKA34]
gi|89051404|gb|EAR56859.1| putative ATP-dependent RNA helicase RhlE [Photobacterium sp. SKA34]
Length = 496
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 5/246 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS P+L+A+ Y P+PIQ IP L G+D+ A TGTGKTA F LP+LE
Sbjct: 2 SFASLGLSAPILEAVAKQGYEKPSPIQEQAIPAILAGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 152 RLLY-KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL +P + R LVL PTREL QV + ++ + A+ GG++V Q +R
Sbjct: 62 RLANGRPARSNHVRALVLTPTRELAAQVGESVATYSKNLRLSSAVVFGGVKVNPQMLRMR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D LH+ + D+E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LHSQNAVKFRDVEILVLDEADRMLDMGFIRDIRKILALLPKERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
+LFSAT +D + +L ++ PV + V+ ++ A ++Q +D+ + N+L +
Sbjct: 181 NLLFSATFSDEIRELAKGLVSNPVEIDVNPRNQTARTVKQWICP---VDQKKKPNLLTKL 237
Query: 331 LLRENC 336
L + N
Sbjct: 238 LNKRNW 243
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 147/256 (57%), Gaps = 10/256 (3%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE+ SF + + L +A L + P+ IQ IPVAL G DI G A TG+GKT AF +
Sbjct: 19 EESVSFKSLGVVDVLCEACERLKWKSPSKIQREAIPVALQGSDIIGLAETGSGKTGAFAI 78
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL++LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 79 PILQKLLDSP---QRLYALILTPTRELAFQISEQFEALGSAIGVKCAVVVGGIDMMSQSL 135
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+++ R
Sbjct: 136 MLAKKPHIIIATPGRLIDHLENTKGFNLRALKFLVMDEADRILNMDFEQEVDKILKVIPR 195
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV----SFSNIDEVRL 323
R T L+SATMT V L SL PV+V V + ++ L+Q ++ F ++ V +
Sbjct: 196 ERSTYLYSATMTKKVAKLQRASLQNPVKVEVSSKYQTVDKLQQYYLFVPAKFKDVYLVSV 255
Query: 324 YNVLG---LMLLRENC 336
N L M+ C
Sbjct: 256 LNELAGNSFMVFTSTC 271
>gi|440227497|ref|YP_007334588.1| ATP-dependent RNA helicase protein [Rhizobium tropici CIAT 899]
gi|440039008|gb|AGB72042.1| ATP-dependent RNA helicase protein [Rhizobium tropici CIAT 899]
Length = 548
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 140/231 (60%), Gaps = 5/231 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+ FH + LS+ ++ + N+ PTPIQA IP+ L GRD+ G A TGTGKTAAF LPI+
Sbjct: 2 TDFHSLGLSKQIVDTLSQNNFATPTPIQAQAIPLVLQGRDLIGLAQTGTGKTAAFGLPII 61
Query: 151 ERLLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
E LL + + D++ R L+L PTREL Q+ R + T + + L VGG + Q+
Sbjct: 62 EMLLKEAKRPDNRTVRTLILAPTRELVNQIADNLRLFMRKTQLRINLVVGGASINKQQLQ 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L + DI++ATPGRLLD L N + SL + LVLDEAD+MLD F +++I ++
Sbjct: 122 LERGTDILVATPGRLLD-LINRRALSLGHVTHLVLDEADQMLDLGFIHDLRKIAKMVPAK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVSFSN 317
RQT+LFSATM A+ DL S LT PV+V V + A + Q FV+ N
Sbjct: 181 RQTLLFSATMPKAIGDLASDYLTNPVKVEVSPPGKAADKVEQYVHFVAGQN 231
>gi|110634124|ref|YP_674332.1| DEAD/DEAH box helicase [Chelativorans sp. BNC1]
gi|110285108|gb|ABG63167.1| DEAD/DEAH box helicase-like protein [Chelativorans sp. BNC1]
Length = 477
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 130/222 (58%), Gaps = 1/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + LS +L A+G Y PTPIQA IP AL G+D+ G A TGTGKTA+F+LP+L
Sbjct: 2 TFSDLGLSPKVLAAVGDAGYTVPTPIQAGAIPHALQGKDVLGIAQTGTGKTASFVLPMLT 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + R L+L PTREL QV + + + + +AL +GG+ QE L +
Sbjct: 62 RLERGRARARMPRTLILEPTRELAAQVEENFVKYGKNHRLNIALLIGGVSFDEQEKKLER 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGRLLDH H L+ +E+LV+DEADRMLD F ++ I +L TRQT
Sbjct: 122 GADVLIATPGRLLDH-HERGKLLLTGVEILVIDEADRMLDMGFIPDIERICKLIPFTRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ FSATM + L L PVRV V A+N+ Q V
Sbjct: 181 LFFSATMPPEITKLTEQFLQGPVRVEVSKPASTAVNITQRLV 222
>gi|451993988|gb|EMD86460.1| hypothetical protein COCHEDRAFT_1218663 [Cochliobolus
heterostrophus C5]
Length = 579
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 147/246 (59%), Gaps = 7/246 (2%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P F ++NLS + AI + + T IQ TIP L GRD+ G A TG+GKT AF
Sbjct: 123 PTPNPVRFEELNLSERTMSAIKEMGFEKMTEIQQKTIPPLLSGRDVLGAAKTGSGKTLAF 182
Query: 146 MLPILE---RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
++P +E +L +KPR+ T V+V+ PTREL +Q++ V R+L S + +GG
Sbjct: 183 LIPAIEMLSQLRFKPRN--GTGVIVVSPTRELALQIFGVARELMSNHSQTFGILIGGANR 240
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
+ LRK +++IATPGRLLDHLHNT F ++ L++DEADR+L+ F +M+ II
Sbjct: 241 SAEAEKLRKGLNLIIATPGRLLDHLHNTQGFVFKNLRSLIIDEADRILEVGFEDEMRSII 300
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF-SNIDEV 321
++ RQTMLFSAT T V DL +SL +P ++++ ++ N +++ + F S+ V
Sbjct: 301 KILPTERQTMLFSATQTTKVEDLARISL-KPGPLYINVDYRAEHNQKKKVIVFLSSCASV 359
Query: 322 RLYNVL 327
Y+ L
Sbjct: 360 DFYSEL 365
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 143/255 (56%), Gaps = 10/255 (3%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GKT AF LP
Sbjct: 69 EKLTWKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALP 128
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
IL LL P Q LVL PTREL Q+ + L ++ + VGG+++ Q
Sbjct: 129 ILHALLENP---QRFFALVLTPTRELAFQIGEQFEALGSSIGIKCCVVVGGMDMVAQGLQ 185
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I+++ R
Sbjct: 186 LAKKPHIIIATPGRLVDHLENMKGFNLKSIKYLVMDEADRILNMDFEVELDKILKVLPRE 245
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLY 324
R+T LFSATMT V L SL PV+V V N ++ L+Q + V + ++ V +
Sbjct: 246 RRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQYYLFIPVKYKDVYLVHIL 305
Query: 325 NVLG---LMLLRENC 336
N L M+ C
Sbjct: 306 NELAGNSFMIFCSTC 320
>gi|291392612|ref|XP_002712706.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Oryctolagus cuniculus]
Length = 406
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 132/224 (58%), Gaps = 3/224 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF LPI
Sbjct: 23 TKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPI 82
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L LL P Q LVL PTREL Q+ + L V A+ VGG++ Q L
Sbjct: 83 LNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSLAL 139
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R R
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|393218838|gb|EJD04326.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 540
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 137/223 (61%), Gaps = 7/223 (3%)
Query: 85 PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
P E F + LS P KAI + + TP+QA IP L G+D+ G A TG+GKT A
Sbjct: 13 PAQPERQPFSSLELSEPTTKAIAEMGFTTMTPVQAKAIPPLLAGKDVLGAARTGSGKTLA 72
Query: 145 FMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
F++P +L RL +KPR+ T +++L PTREL +Q++ V ++L + S + +GG
Sbjct: 73 FLVPAVELLHRLKFKPRN--GTGIIILSPTRELALQIFGVAKELMAYHSQTFGIVIGGAN 130
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
K + L K ++V+ATPGRLLDHL NT F +++ LV+DEADR+L+ F +MK+I
Sbjct: 131 RKAEAEKLVKGVNLVVATPGRLLDHLENTKGFVFRNLKALVIDEADRILEIGFEEEMKKI 190
Query: 262 IR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
I L + RQ+MLFSAT T V DL +SL RP + +D + E
Sbjct: 191 ISILPNENRQSMLFSATQTTKVQDLARISL-RPGPLHIDVDKE 232
>gi|148232160|ref|NP_001084651.1| uncharacterized protein LOC414610 [Xenopus laevis]
gi|46249606|gb|AAH68844.1| MGC81500 protein [Xenopus laevis]
Length = 317
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
EE +F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF L
Sbjct: 16 EEQKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMALQGRDIIGLAETGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q LVL PTREL Q+ + + V+ A+ VGG+++ Q
Sbjct: 76 PILQTLLESP---QRLYALVLTPTRELAFQISEQFEAIGSSIGVKSAVIVGGIDMMSQSL 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L K P +VIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R
Sbjct: 133 ALAKKPHVVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + ++ L+Q +V
Sbjct: 193 DRKTFLFSATMTKKVQKLERAALKDPVKCAVSSKYQTVEKLQQFYV 238
>gi|296210932|ref|XP_002752173.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Callithrix jacchus]
Length = 406
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 133/224 (59%), Gaps = 3/224 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF LPI
Sbjct: 23 TKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPI 82
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q L
Sbjct: 83 LNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R R
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+T LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|116195380|ref|XP_001223502.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
gi|118595827|sp|Q2H1Q8.1|RRP3_CHAGB RecName: Full=ATP-dependent rRNA helicase RRP3
gi|88180201|gb|EAQ87669.1| hypothetical protein CHGG_04288 [Chaetomium globosum CBS 148.51]
Length = 493
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 143/249 (57%), Gaps = 10/249 (4%)
Query: 67 EAE-EYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
EAE E ++ G+E E AP +F + + L A L + PTPIQ +IP+A
Sbjct: 45 EAESETIDDASGEESEEPAP-----KTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLA 99
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L RDI G A TG+GKT AF LPIL+ LL KP Q LVL PTREL Q+ Q L
Sbjct: 100 LQDRDIIGLAETGSGKTGAFALPILQALLDKP---QPLFALVLAPTRELAAQIAQSFEAL 156
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
S+ AL +GGL++ Q L K P +V+ATPGRLLDHL T FSL ++ LV+DE
Sbjct: 157 GSLISLRCALILGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDE 216
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN-HEV 304
ADR+LD F + +I++ R R+T LFSATM+ V L L P++V + ++ ++
Sbjct: 217 ADRLLDMDFGPILDKILKFLPRERRTFLFSATMSSKVESLQRACLRDPLKVSISSSKYQT 276
Query: 305 ALNLRQEFV 313
L Q +V
Sbjct: 277 VSTLVQNYV 285
>gi|389696462|ref|ZP_10184104.1| DNA/RNA helicase, superfamily II [Microvirga sp. WSM3557]
gi|388585268|gb|EIM25563.1| DNA/RNA helicase, superfamily II [Microvirga sp. WSM3557]
Length = 505
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 133/223 (59%), Gaps = 3/223 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F L++P+LKA+ A Y PTPIQA TIP A+ GRD+CG A TGTGKTAAF LPIL R
Sbjct: 4 FTDFGLAQPILKALSAEGYEKPTPIQAQTIPYAMEGRDVCGIAQTGTGKTAAFALPILHR 63
Query: 153 LLY--KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L KPR ++ RVLVL PTREL Q+ + + + + GG+ + QE L
Sbjct: 64 LNANPKPRKPKSPRVLVLSPTRELSGQIADSFKAYGRNLRLSTEVVFGGVTISRQEKALA 123
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ D+++ATPGRL+D L + + SL DIE+LVLDEAD+MLD F +K I+ L + RQ
Sbjct: 124 QGVDVLVATPGRLID-LVDRRALSLRDIEILVLDEADQMLDLGFIHALKRIVTLLPKDRQ 182
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ FSATM ++ L L P V V A + Q +
Sbjct: 183 SLFFSATMPKTISTLADSFLRDPAHVAVTPVATTAERVEQSVI 225
>gi|156841974|ref|XP_001644357.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114998|gb|EDO16499.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 501
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 142/229 (62%), Gaps = 9/229 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP--- 148
+F + LS P LKAI + + TP+QA TIP L GRD+ G A TG+GKT AF++P
Sbjct: 38 NFKDLKLSDPTLKAIEKMGFTSMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE 97
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+L L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 98 MLHSLKFKPRN--GTGVIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEK 155
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSR 267
L K ++++ATPGRLLDHL NT F +++ LV+DEADR+L+ F +MK+II+ L +
Sbjct: 156 LIKGVNMLVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILPNE 215
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRP---VRVFVDNNHEVALNLRQEFV 313
RQ+MLFSAT T V DL +SL + + V + + A L Q +V
Sbjct: 216 DRQSMLFSATQTTKVEDLARISLRKGPLFINVVTERDTSTADGLEQGYV 264
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + ++ L +A L + PT IQ IPVAL GRDI G A TG+GKT AF LPIL+
Sbjct: 26 SFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPILQ 85
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + L V A+ VGG++ Q L K
Sbjct: 86 ALLDAP---QRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAK 142
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R R+T
Sbjct: 143 KPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKT 202
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 203 FLFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 244
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED ++ ++ + L+ L +A L + P+ IQ IPVAL G+D+ G A TG+GK
Sbjct: 60 EDDTADDQKLTWKDLGLNETLCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGK 119
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL LL P Q LVL PTREL Q+ + L ++ + VGG++
Sbjct: 120 TGAFALPILHALLENP---QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMD 176
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L K P I+IATPGRL+DHL N F+L I+ LV+DEADR+L+ F ++ +I
Sbjct: 177 MVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKI 236
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+++ R R+T LFSATMT V L SL PV+V V N ++ L+Q + V + +
Sbjct: 237 LKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKD 296
Query: 318 IDEVRLYNVL---GLMLLRENC 336
+ V + N L M+ C
Sbjct: 297 VYLVHILNELSGNSFMIFCSTC 318
>gi|110835269|ref|YP_694128.1| DEAD/DEAH box helicase [Alcanivorax borkumensis SK2]
gi|110648380|emb|CAL17856.1| ATP-dependent RNA helicase, DEAD box family [Alcanivorax
borkumensis SK2]
Length = 450
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 145/229 (63%), Gaps = 2/229 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF +NL L+KA+G L PTP+Q A IP AL GRD+ A TG+GKTAAF+LP+L
Sbjct: 2 SSFADLNLHERLIKALGELEITTPTPVQTAAIPAALEGRDLRVVARTGSGKTAAFLLPML 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+LL R +TR L+L+PTREL Q + L ++T ++ L GG + KVQ + +R
Sbjct: 62 HQLLQYSRPRTDTRALILLPTRELAQQTLKQVEALGRYTFIKAELLTGGEDFKVQAAKMR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K P+I+I TPGRL++HL + + L D+E+LVLDE+DRMLD F + + C RQ
Sbjct: 122 KNPEILIGTPGRLIEHL-DAGNLLLQDLEMLVLDESDRMLDMGFNDDVLRLAAECRPERQ 180
Query: 271 TMLFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
T+LFSAT +A+ +++S L P + +D+ ++ ++ Q+ ++ ++
Sbjct: 181 TLLFSATTGGNAMENMISSVLRDPRSLVLDSVRDLNESVSQQIITADDV 229
>gi|146323887|ref|XP_751498.2| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|91206842|sp|Q4WQM4.2|HAS1_ASPFU RecName: Full=ATP-dependent RNA helicase has1
gi|129557486|gb|EAL89460.2| ATP-dependent RNA helicase, putative [Aspergillus fumigatus Af293]
gi|159125568|gb|EDP50685.1| ATP-dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 622
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 141/223 (63%), Gaps = 8/223 (3%)
Query: 85 PPVE-ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
P VE E F ++ LS LKAI + + T IQ TIP L GRD+ G A TG+GKT
Sbjct: 133 PTVEGEPQKFTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTL 192
Query: 144 AFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
+F++P +L L +KPR+ T V+V+ PTREL +Q++ V R+L Q+ S + +GG
Sbjct: 193 SFLIPAVEMLSALRFKPRN--GTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGA 250
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+ + L K +++IATPGRLLDHL NT F +++ LV+DEADR+L+ F +M++
Sbjct: 251 NRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQ 310
Query: 261 IIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
I++ L S RQTMLFSAT T V DL +SL RP ++++ +H
Sbjct: 311 IVKILPSEERQTMLFSATQTTKVEDLARISL-RPGPLYINVDH 352
>gi|406606941|emb|CCH41663.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 578
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 141/223 (63%), Gaps = 11/223 (4%)
Query: 85 PPVEENSS----FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
P +E S F NLS P +KAI ++ + T +QA TIP L GRD+ G A TG+G
Sbjct: 103 PTYDETKSVSDKFDDHNLSAPTMKAIKSMGFEKMTQVQARTIPPLLAGRDVLGAAKTGSG 162
Query: 141 KTAAFMLPILERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
KT AF++P +E L +KPR+ T V+V+ PTREL +Q++ V R+L + S + +
Sbjct: 163 KTLAFLIPAIEMLYSLKFKPRN--GTGVIVVSPTRELALQIFGVARELMEHHSQTFGIVI 220
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG + +E L K +++IATPGRLLDHL NT F +++ LV+DEADR+L+ F +
Sbjct: 221 GGANRRAEEEKLVKGVNLLIATPGRLLDHLQNTRGFVFKNLKALVIDEADRILEIGFEEE 280
Query: 258 MKEIIRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
M++II++ + RQ+MLFSAT T V DL +SL RP +F++
Sbjct: 281 MRQIIKILPKDERQSMLFSATQTTKVEDLARISL-RPGPLFIN 322
>gi|269967184|ref|ZP_06181249.1| ATP-dependent RNA helicase [Vibrio alginolyticus 40B]
gi|269828174|gb|EEZ82443.1| ATP-dependent RNA helicase [Vibrio alginolyticus 40B]
Length = 522
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 130/222 (58%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R L+L PTREL QV + ++ + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRANQVRALILTPTRELAAQVQENVFMYSRHLPLNSAVVFGGVKINPQMQRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D L+N + +EVLVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LYNQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQSI 222
>gi|403215528|emb|CCK70027.1| hypothetical protein KNAG_0D02780 [Kazachstania naganishii CBS
8797]
Length = 476
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E + F + LS P +KAI + + T +Q TIP L G+D+ G A TG+GKT AF++P
Sbjct: 7 EIAEFSSLELSAPTMKAIEKMGFTKMTTVQERTIPPLLAGKDVLGAAKTGSGKTLAFLIP 66
Query: 149 ILERL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
+E L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 67 AIETLHALKFKPRN--GTGVIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQE 124
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-L 264
L K +I+IATPGRLLDHL NT F +++ LV+DEADR+L+ F +MK+IIR L
Sbjct: 125 AEKLAKGVNILIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIRIL 184
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRP---VRVFVDNNHEVALNLRQEFV 313
+ RQ+MLFSAT T V DL +SL + + V + +H A L Q +V
Sbjct: 185 PNEERQSMLFSATQTTKVEDLARISLRKGPLFINVVPETDHSTADGLEQGYV 236
>gi|401839179|gb|EJT42502.1| HAS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 505
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 145/229 (63%), Gaps = 11/229 (4%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---I 149
F ++ LS+P LKAI L + T +Q+ TIP L GRD+ G A TG+GKT AF++P +
Sbjct: 44 FEELKLSQPTLKAIEKLGFTTMTSVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +GG + + L
Sbjct: 104 LHSLKFKPRN--GTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 161
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRT 268
K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +M++II+ L +
Sbjct: 162 MKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNED 221
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEFV 313
RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +V
Sbjct: 222 RQSMLFSATQTTKVEDLARISL-RPGPLFINVVPETDNSTADGLEQGYV 269
>gi|342873274|gb|EGU75480.1| hypothetical protein FOXB_13992 [Fusarium oxysporum Fo5176]
Length = 587
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 144/225 (64%), Gaps = 10/225 (4%)
Query: 85 PPVE--ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
PPV E+ SF ++NLS +KAI + + T IQ IP +L GRD+ G A TG+GKT
Sbjct: 105 PPVAGAESQSFAELNLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKT 164
Query: 143 AAFMLPILE---RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGG 199
AF++P++E L +KPR+ T V+V+ PTREL +Q++ V R+L S + +GG
Sbjct: 165 LAFLIPVIEMLSSLRFKPRN--GTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGG 222
Query: 200 LEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMK 259
+ + L K +++IATPGRLLDHL NTP F +++ LV+DEADR+L+ F +M+
Sbjct: 223 ANRRAEADKLAKGVNLLIATPGRLLDHLQNTP-FVFKNLKSLVIDEADRILEIGFEDEMR 281
Query: 260 EIIRLCSRT-RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
+II++ + RQTMLFSAT T V DL +SL RP ++++ + E
Sbjct: 282 QIIKILPKEDRQTMLFSATQTTKVEDLARISL-RPGPLYINVDEE 325
>gi|294889193|ref|XP_002772710.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239877218|gb|EER04526.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 240
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 127/212 (59%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
EE +F + + L KA L + +P+ IQ TIP AL GRD+ A TG+GKT AF
Sbjct: 26 AEEPVTFESLGVCPELCKACDVLQWKHPSKIQEETIPYALQGRDLIALAETGSGKTGAFA 85
Query: 147 LPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
+PI+++LL + T VL PTREL VQ Q L ++ A VGGL++ Q
Sbjct: 86 IPIIQKLLDAAPHRKLTWACVLAPTRELCVQTGQQFEGLGASINLTTATIVGGLDMVTQA 145
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
L K P I++A+PGRL+DHL NT F L I+ LV+DEADR+L F + +I++ C
Sbjct: 146 MSLSKKPHIIVASPGRLVDHLENTKGFHLKTIKFLVMDEADRLLGMDFEDALNKIVQSCP 205
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
R RQT LFSATMT+ V+ L SLTRPV+ V
Sbjct: 206 RDRQTFLFSATMTNKVSQLQRASLTRPVKCEV 237
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 141/251 (56%), Gaps = 7/251 (2%)
Query: 66 VEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVA 125
V AE+ E++ E ED + + F L LL +I +L + T IQA++IP A
Sbjct: 31 VGAEQQEDDGSSSEQDEDG--IITSKPFASFGLHETLLSSIASLKWENATKIQASSIPPA 88
Query: 126 LLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQL 185
L GRD+ G A TG+GKT AF +P+L LL KP+ ++ ++L PTREL Q+++V L
Sbjct: 89 LEGRDVIGLAETGSGKTGAFSIPVLNYLLEKPQ--RSVFAVILAPTRELAFQIHEVVAAL 146
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
VGG+++ Q L + P +V+ATPGRLLDHL NT F L I+ LVLDE
Sbjct: 147 GSGMGASSVCVVGGVDMASQAIALARNPHVVVATPGRLLDHLQNTKGFHLRQIKYLVLDE 206
Query: 246 ADRMLDEHFASQMKEIIRLC---SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
ADRML F ++ EI+ + R+TMLFSATMT V L SL PVRV V
Sbjct: 207 ADRMLSMDFEREINEILEVIPDHEGGRRTMLFSATMTSKVEKLQRASLVDPVRVEVSTKF 266
Query: 303 EVALNLRQEFV 313
+ L Q ++
Sbjct: 267 QTPKKLLQSYL 277
>gi|237707985|ref|ZP_04538466.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
gi|229457971|gb|EEO63692.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 9_1_42FAA]
Length = 434
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A++T V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDYKKGIKALILTPTRELAIQIGENFDQYAKYTGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L LT P +V V
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPKKVEV 206
>gi|402700606|ref|ZP_10848585.1| DEAD/DEAH box helicase [Pseudomonas fragi A22]
Length = 448
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F L LLKA+ L ++ PTP+QAA IP+AL GRD+ A TG+GKTAAF+LPIL R
Sbjct: 2 FSDFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ + + + L+L+PTREL Q + + +QFT ++ L GG + KVQ ++LRK
Sbjct: 62 LIGPAKIRVSIKALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+ L N + L ++EVLVLDEADRMLD F+ ++ ++ C +QTM
Sbjct: 122 PDILIGTPGRLLEQL-NAGNLDLKEVEVLVLDEADRMLDMGFSEDVQRLVDECPNRQQTM 180
Query: 273 LFSAT 277
LFSAT
Sbjct: 181 LFSAT 185
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 143/251 (56%), Gaps = 7/251 (2%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED E ++ + L L K L + PT IQ IP+ L G+D+ G A TG+GK
Sbjct: 9 EDTKDNVEKITWKDLGLVDILCKTCLDLKWKEPTRIQQEAIPLTLQGKDVIGLAETGSGK 68
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
TAAF LPIL+ LL P Q L+L PTREL Q+ + L V+ + VGG++
Sbjct: 69 TAAFALPILQALLENP---QRYFALILTPTRELAFQISEQFDALGSSIGVKTVVLVGGMD 125
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q +L K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I
Sbjct: 126 MHAQGMILEKKPHIIIATPGRLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKI 185
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSN 317
+R+ R R+T+LFSATMT V L SL PV+V V ++ L+Q + V F +
Sbjct: 186 LRVIPRERRTLLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKD 245
Query: 318 IDEVRLYNVLG 328
+ V + N L
Sbjct: 246 VYLVHILNELA 256
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 141/241 (58%), Gaps = 3/241 (1%)
Query: 73 ENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDIC 132
E++ E + A EE +F + ++ L +A L + PT IQ IP+AL GRDI
Sbjct: 6 EHDSSTETLQAAAEEEEAKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDII 65
Query: 133 GCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVE 192
G A TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+
Sbjct: 66 GLAETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQ 122
Query: 193 VALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDE 252
A+ VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+
Sbjct: 123 CAVIVGGIDSMSQSIALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNM 182
Query: 253 HFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
F +++ +I+++ R R+T LFSATMT V L +L PV+ V + ++ L+Q +
Sbjct: 183 DFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYY 242
Query: 313 V 313
+
Sbjct: 243 L 243
>gi|407801566|ref|ZP_11148410.1| DEAD/DEAH box helicase [Alcanivorax sp. W11-5]
gi|407025003|gb|EKE36746.1| DEAD/DEAH box helicase [Alcanivorax sp. W11-5]
Length = 443
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 137/227 (60%), Gaps = 2/227 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F ++ L LLKA+ L + PTP+QAA IP AL G D+ A TG+GKTAAF+LP+L
Sbjct: 2 FAELPLHERLLKALAELGFTEPTPVQAAAIPEALAGHDLRVTAQTGSGKTAAFLLPMLHY 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ P TR L+L+PTREL Q + QL FT ++ L GG + KVQ + +RK
Sbjct: 62 LIEHPDHRAGTRALILLPTRELARQTLKHVEQLIGFTYIKAELITGGEDFKVQAARMRKN 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
PDI+I TPGRLL+HL + SD+ +LVLDEADRMLD F + + +C+ RQT+
Sbjct: 122 PDILIGTPGRLLEHL-EAGNLDFSDLTMLVLDEADRMLDMGFKDDVLRLAEICNPKRQTL 180
Query: 273 LFSAT-MTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
LFSAT A+ +V+ L P + ++ + N+R + ++ ++
Sbjct: 181 LFSATPGGQAMAQVVAAVLREPRELVINTVRDEHANIRHQLITVDDV 227
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 3/210 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L L +A L Y PT IQ IP+AL RD+ G A TG+GKTAAF LPIL+
Sbjct: 53 TFKDLGLIPQLCEACDTLGYKAPTAIQTEAIPLALQNRDLIGLAETGSGKTAAFALPILQ 112
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L+ KP Q LVL PTREL Q+ + L SV + VGG+++ Q + K
Sbjct: 113 ALMDKP---QPFFGLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIGK 169
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGRLLDHL NT FSL ++ LV+DEADR+LD F + +I+++ R R+T
Sbjct: 170 RPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKVLPRERRT 229
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
LFSATM+ V L SL+ P+RV V +N
Sbjct: 230 FLFSATMSSKVEGLQRASLSNPLRVSVSSN 259
>gi|301119991|ref|XP_002907723.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106235|gb|EEY64287.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 479
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 136/232 (58%), Gaps = 3/232 (1%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
E A ++SF ++ + + +AI A+ + P+ IQ IP L G+DI G A TG+GK
Sbjct: 19 ETAEGFSGSASFAELGVDSAICEAIEAVGWSAPSKIQQQAIPHGLAGKDIIGLAETGSGK 78
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF++PIL+ LL+ P Q LVL PTREL Q+ + L ++ A VGG++
Sbjct: 79 TGAFVIPILQSLLHNP---QRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGID 135
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q+ L + P +VIATPGRL+DHL NT FSL ++ LVLDEADRML F ++ +I
Sbjct: 136 MMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQI 195
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++L R T LFSATMT V L SL PV+V + + L+Q ++
Sbjct: 196 VQLMPADRNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYL 247
>gi|115352406|ref|YP_774245.1| DEAD/DEAH box helicase [Burkholderia ambifaria AMMD]
gi|115282394|gb|ABI87911.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria AMMD]
Length = 497
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 139/232 (59%), Gaps = 8/232 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A PV +++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 6 AKPV--DATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTA 63
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ TS+ A+ G
Sbjct: 64 SFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAVVFG 123
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 124 GVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 182
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ I+ L + RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 183 QRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
>gi|221062043|ref|XP_002262591.1| DEAD/DEAH box helicase (fragment) [Plasmodium knowlesi strain H]
gi|193811741|emb|CAQ42469.1| DEAD/DEAH box helicase, putative (fragment) [Plasmodium knowlesi
strain H]
Length = 555
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 177/310 (57%), Gaps = 18/310 (5%)
Query: 1 DDSSDEEGNKEDKEDNEGSEEDDVDAEEDFALPDD---EMKHDNIKNRQKLIGKKKQKRL 57
D + E N E + DN SE D+V++E D ++ E ++DN+++ + + + +
Sbjct: 48 DSAESENDNVESENDNVESENDNVESENDNVESENDNVESENDNVESENDNV-ESENDNV 106
Query: 58 AKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAI--GALNYIYPT 115
E + + E EE + KE + + ++ N+ + + +SRP LK + G LN PT
Sbjct: 107 ESENEDARGECEEPSSKKNPKEN-DSSSVIDRNTLWSDLYISRPFLKVLYEGKLNN--PT 163
Query: 116 PIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLL---------YKPRDDQNTRVL 166
IQ IP+AL G+ I + TG+GKT AF+LPILERLL Y PR T+ L
Sbjct: 164 FIQRDVIPLALEGKSILANSETGSGKTLAFVLPILERLLHSPNIKMRSYNPRSICITKSL 223
Query: 167 VLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDH 226
+L+PTREL +Q Y V + + ++ + +L GG++VK QE +K DI I TPGR+LD
Sbjct: 224 ILLPTRELALQCYDVVKSMTKYVPITYSLFCGGIDVKQQEHEYKKKKDIFICTPGRILDL 283
Query: 227 LHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLV 286
L N+ S ++ +EV+V DEAD++L+ F + +++ +C +Q + FSAT+T + +L
Sbjct: 284 LLNSSSDFINYLEVVVFDEADKLLELGFKEECLKVLDVCKFKKQILFFSATLTRDIKELA 343
Query: 287 SVSLTRPVRV 296
+ SL P+ +
Sbjct: 344 NFSLKNPIFI 353
>gi|390449448|ref|ZP_10235054.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
gi|389664141|gb|EIM75649.1| DEAD/DEAH box helicase [Nitratireductor aquibiodomus RA22]
Length = 470
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 129/222 (58%), Gaps = 1/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + LS+ +L A+ Y PTPIQA IP AL G+D+ G A TGTGKTA+F+LP+L
Sbjct: 2 TFSDLGLSQKVLSAVADAGYTQPTPIQAGAIPHALTGKDVLGIAQTGTGKTASFVLPMLT 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + R L+L PTREL QV + + + + +AL +GG+ QE L +
Sbjct: 62 RLERGRARARMPRTLILEPTRELAAQVEENFVKYGKNHRLNIALLIGGVSFDEQEKKLER 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGRLLDH L+ +E+LV+DEADRMLD F ++ I +L TRQT
Sbjct: 122 GADVLIATPGRLLDHFERG-KLLLTGVEILVIDEADRMLDMGFIPDIERICKLIPFTRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ FSATM + L L PVRV V A N+ Q FV
Sbjct: 181 LFFSATMPPEITKLTEQFLQAPVRVEVSRPATTATNITQRFV 222
>gi|302823844|ref|XP_002993570.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
gi|300138582|gb|EFJ05345.1| hypothetical protein SELMODRAFT_270055 [Selaginella moellendorffii]
Length = 434
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 132/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ + L+ A L + PTPIQ +P+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 9 SFGELGVREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTAAFALPILQ 68
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + VL PTREL +Q+ + L V VGG+ + Q L K
Sbjct: 69 ALF---QQCHPFFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGK 125
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IV+ATPGRLLDHL NT FSL +++ LVLDEAD++L F ++ EI+++ R R+T
Sbjct: 126 NPHIVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEILKVVPRERKT 185
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT+ V L L P +V V + + AL L+QE+V
Sbjct: 186 FLFSATMTNKVAKLQRACLRNPTKVEVSSKYTTALTLKQEYV 227
>gi|241663607|ref|YP_002981967.1| DEAD/DEAH box helicase [Ralstonia pickettii 12D]
gi|240865634|gb|ACS63295.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12D]
Length = 493
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 136/234 (58%), Gaps = 14/234 (5%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P E+ +F L +L+A+ Y PTPIQAA IPV GRD+ G A TGTGKTA F
Sbjct: 8 PANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGRDVMGAAQTGTGKTAGF 67
Query: 146 MLPILERLLYKPRDDQNT---------RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
LPI+ LL D NT R L+L PTREL QVY + A++T++ A+
Sbjct: 68 SLPIIHNLL----PDANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTALRSAVV 123
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG+++ Q LR+ +I++ATPGRLLDH+ S +LS + +LVLDEADRMLD F
Sbjct: 124 FGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQR-SVNLSQVRMLVLDEADRMLDMGFLP 182
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ II L RQT+LFSAT + + L + L P + V ++ A N+RQ
Sbjct: 183 DLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATAENVRQ 236
>gi|345318725|ref|XP_003430052.1| PREDICTED: probable ATP-dependent RNA helicase ddx27-like, partial
[Ornithorhynchus anatinus]
Length = 571
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 144/249 (57%), Gaps = 14/249 (5%)
Query: 80 FFEDAPP-VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
F + P V ++ S+ + L R +LK I L + YPT IQ IPVAL G DI + TG
Sbjct: 160 FINNVPECVNKDISWSEFKLHRLILKGIFELGFSYPTKIQCEVIPVALRGLDIIATSETG 219
Query: 139 TGKTAAFMLPILERLL----YKPRDDQN---------TRVLVLVPTRELGVQVYQVTRQL 185
+GKTAAF++P+++RLL + + QN + LVL PTREL Q Y V +L
Sbjct: 220 SGKTAAFLIPLVQRLLASCSLRHQIRQNYGKHAVYNEVKALVLFPTRELTSQCYAVFLKL 279
Query: 186 AQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDE 245
+ SVE ++ GG+ +K QE+ LR P+IV +TPGR LD N+ IE+++ DE
Sbjct: 280 TTYVSVESSMLTGGIPLKEQEAQLRCAPEIVFSTPGRTLDIFLNSSCIHSGSIEIVIFDE 339
Query: 246 ADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
ADR+LD F + I++ C+ RQ MLFSAT+++ +LVS++L PV + + N
Sbjct: 340 ADRLLDMGFKDECISILKCCNVERQIMLFSATLSNETKNLVSLALKSPVYISISNPSLTV 399
Query: 306 LNLRQEFVS 314
+L EF +
Sbjct: 400 ASLSLEFYT 408
>gi|189193121|ref|XP_001932899.1| ATP-dependent RNA helicase HAS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978463|gb|EDU45089.1| ATP-dependent RNA helicase HAS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 606
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 140/234 (59%), Gaps = 8/234 (3%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P+ + F ++NLS +AI + + T IQ IP L GRD+ G A TG+GKT AF
Sbjct: 122 PMANPTEFAELNLSERTRQAIDGMGFKTMTEIQQKAIPPLLAGRDVLGAAKTGSGKTLAF 181
Query: 146 MLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
++P +L +L +KPR+ T V+V+ PTREL +Q++ V R+L + S + +GG
Sbjct: 182 LIPAIEMLSQLRFKPRN--GTGVIVVSPTRELALQIFGVARELMEHHSQTFGICIGGANR 239
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
+ LRK +++IATPGRLLDHLHNT F ++ LV+DEADR+L+ F +M+ II
Sbjct: 240 SAEADKLRKGVNLLIATPGRLLDHLHNTQGFVFKNLRSLVIDEADRILEVGFEDEMRSII 299
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSL-TRPVRVFVDNN--HEVALNLRQEFV 313
++ RQTMLFSAT T V DL +SL P+ + VD+ H L Q +V
Sbjct: 300 KILPTERQTMLFSATQTTKVEDLARISLKAGPLYINVDHRAEHSTVQGLEQGYV 353
>gi|410094143|ref|ZP_11290596.1| ATP-dependent RNA helicase rhlE [Pseudomonas viridiflava UASWS0038]
gi|409758453|gb|EKN43752.1| ATP-dependent RNA helicase rhlE [Pseudomonas viridiflava UASWS0038]
Length = 442
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLL+A+ AL Y PTP+QA IP L GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLIEPLLRALDALGYQTPTPVQAQAIPPVLAGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL + P+ NT R LVL PTREL QV++ RQ A+ + GG+ + Q L
Sbjct: 62 RLTMEGPKVAPNTIRALVLAPTRELAEQVHESIRQYAEHLPLSTYAVYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK D+++ATPGRLLD LH + S ++ L+LDEADRMLD FA +++ I + R
Sbjct: 122 RKGVDVLVATPGRLLD-LHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIYAALPKRR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +D + L S L P+ + V + A +++Q V+ + L+
Sbjct: 181 QTLLFSATFSDPIRLLASQMLDDPLTIEVSPRNVAAASVKQWVVTVDKKRKADLF 235
>gi|339061979|ref|ZP_08649136.1| ATP-dependent RNA helicase SrmB [gamma proteobacterium IMCC2047]
gi|330719991|gb|EGG98438.1| ATP-dependent RNA helicase SrmB [gamma proteobacterium IMCC2047]
Length = 448
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
Query: 98 LSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKP 157
L+ L+KA+ + PTP+Q +IP AL G+D+ A TG+GKTAAF+LPIL +LL
Sbjct: 11 LNERLIKALEKQGFEQPTPVQEQSIPAALAGKDLLVSAETGSGKTAAFLLPILNKLLAND 70
Query: 158 RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVI 217
+ TR LVLVPTREL QV + LA F+ ++ L +G ++Q+++ RK P+I+I
Sbjct: 71 APNTGTRALVLVPTRELARQVLKNCEALASFSHLKAGLIIGRENFQIQKALFRKNPEILI 130
Query: 218 ATPGRLLDHL-HNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSA 276
ATPGRL++HL NTP F D+EVLVLDEADRMLD F + +I C++ RQT+L+SA
Sbjct: 131 ATPGRLVEHLDQNTPDF--KDLEVLVLDEADRMLDMGFGEDVLKITHACNKERQTLLYSA 188
Query: 277 TMTD-AVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T+ + ++ LT P ++ +++ + ++RQ+ +
Sbjct: 189 TLNQKGLKPMIEKVLTDPQKLLLNSVRDQHQSIRQQII 226
>gi|363752775|ref|XP_003646604.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890239|gb|AET39787.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
Length = 500
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 7/215 (3%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---I 149
F ++ LS+ LKAI + + T +QA TIP + GRD+ G A TG+GKT AF++P +
Sbjct: 38 FDELGLSKQTLKAIEKMGFTTMTQVQAKTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIEM 97
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG + + L
Sbjct: 98 LHSLKFKPRN--GTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 155
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRT 268
K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +MK+II+ L +
Sbjct: 156 SKGVNLIIATPGRLLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIKILPNED 215
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
RQ+MLFSAT T V DL +SL RP +F++ + E
Sbjct: 216 RQSMLFSATQTTKVEDLARISL-RPGPLFINVDSE 249
>gi|172061278|ref|YP_001808930.1| DEAD/DEAH box helicase [Burkholderia ambifaria MC40-6]
gi|171993795|gb|ACB64714.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MC40-6]
Length = 511
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 146/255 (57%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 7 GLTHDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQ 62
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 63 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELA 122
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ TS+ A+ GG+++ Q + LR+ +I+IATPGRLLDH+ + +L
Sbjct: 123 DQVAANVHAYAKHTSLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANL 181
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 182 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQT 241
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 242 IEVARSNSTNANVTQ 256
>gi|340053603|emb|CCC47896.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 768
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 145/235 (61%), Gaps = 19/235 (8%)
Query: 95 QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLL 154
++ L + L++A+G L + PTP+Q IP L G D+C A TG+GKTAAF+LP+L LL
Sbjct: 135 ELGLCKALVRAVGHLGFFSPTPVQVQAIPAILDGGDVCARAVTGSGKTAAFLLPVLHTLL 194
Query: 155 YK-PRDDQNT-------RVLVLVPTRELGVQVYQVTRQLAQFTS-VEVALSVGGLEVKVQ 205
+ P T R L+LVP+RELG+Q V +QL FT+ + VAL++GG+ Q
Sbjct: 195 TRSPVKQAQTCGKRRFVRALILVPSRELGMQCQHVLQQLLTFTTGLTVALAIGGVAQSAQ 254
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTP----SFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
E+ L PDI+IATPGRL+D LHN S ++ +E++VLDE D++L Q+++I
Sbjct: 255 EAALEAIPDILIATPGRLVDLLHNYKGPHGSLDVTGVEIVVLDECDKLLTATLKDQVEDI 314
Query: 262 I-RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVAL--NLRQEFV 313
+ R+ TRQ ++FSATMT V++ L P V V + VAL NLRQ+FV
Sbjct: 315 LKRVPEETRQVLMFSATMTQVVDEFAKEHLFEPKNVDVGH---VALQSNLRQQFV 366
>gi|150002994|ref|YP_001297738.1| ATP-dependent RNA helicase DeaD [Bacteroides vulgatus ATCC 8482]
gi|149931418|gb|ABR38116.1| ATP-dependent RNA helicase DeaD [Bacteroides vulgatus ATCC 8482]
Length = 434
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 132/219 (60%), Gaps = 2/219 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A +T V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDHKKGIKALILTPTRELAIQIGENFDQYAGYTGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ FSATM + L LT P ++ V +RQ
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPEKIEVTPVSSTVDTIRQ 218
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 136/235 (57%), Gaps = 5/235 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PL KA +LN+ PTPIQ +IP AL +DI G A TG+GKTAAF LP+L+
Sbjct: 60 TFASLGLIEPLCKACESLNFKTPTPIQTESIPYALQNKDIIGLAQTGSGKTAAFALPVLQ 119
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L P VL PTREL Q+ Q L V+ + VGG+++ Q L K
Sbjct: 120 SLWDSP---SAFFACVLAPTRELAYQISQQFDALGSTIGVKTVVIVGGMDMMSQAIALSK 176
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGRL DHL +T FSL +++ L++DEADR+LD F + +I+++ + R+T
Sbjct: 177 RPHVIVATPGRLHDHLEHTKGFSLRNLQFLIMDEADRLLDMDFGPVIDKILKVIPKERKT 236
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSNIDEVRLY 324
LFSATMT V L SL PV+V V ++ L Q F+ F + D +Y
Sbjct: 237 YLFSATMTTKVAKLQRASLNNPVKVEVSAKYDTVSALVQTYLFLPFKHKDTYLVY 291
>gi|420246760|ref|ZP_14750191.1| DNA/RNA helicase, superfamily II, partial [Burkholderia sp. BT03]
gi|398073382|gb|EJL64557.1| DNA/RNA helicase, superfamily II, partial [Burkholderia sp. BT03]
Length = 411
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 135/235 (57%), Gaps = 6/235 (2%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
D N++F Q L +LKAI Y PTPIQA IPV L GRD+ G A TGTG
Sbjct: 1 MSDTATTPTNATFDQFGLHADILKAIAEQGYTTPTPIQAEAIPVVLGGRDVMGAAQTGTG 60
Query: 141 KTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
KTA F LPI++RLL + R L+L PTREL QV + A+ TS+ A+
Sbjct: 61 KTAGFSLPIIQRLLPLASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTSLRSAV 120
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
GG+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F
Sbjct: 121 VFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFL 179
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ I+ L RQT+LFSAT + + L S L P + V ++ A N+ Q
Sbjct: 180 PDLQRILNLLPAERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQ 234
>gi|170701603|ref|ZP_02892549.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
gi|170133486|gb|EDT01868.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
Length = 571
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 139/232 (59%), Gaps = 8/232 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A PV +++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 80 AKPV--DATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTA 137
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ TS+ A+ G
Sbjct: 138 SFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAVVFG 197
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 198 GVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 256
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ I+ L + RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 257 QRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQ 308
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 132/229 (57%), Gaps = 5/229 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + + +++A + + +PTPIQ IP AL RD+ G A TG+GKTAAF +PIL+
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L P+ VL PTREL Q+ Q L V A VGG+++ Q L K
Sbjct: 166 LWDNPKP---FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKR 222
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P +++ATPGRL DHL NT FSL ++ LV+DEADR+LD F + ++++ R R+TM
Sbjct: 223 PHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTM 282
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQE--FVSFSNID 319
LFSATMT V L SL PVRV VD + L+Q F+ F++ D
Sbjct: 283 LFSATMTTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYMFMPFAHKD 331
>gi|330926789|ref|XP_003301614.1| hypothetical protein PTT_13150 [Pyrenophora teres f. teres 0-1]
gi|311323488|gb|EFQ90287.1| hypothetical protein PTT_13150 [Pyrenophora teres f. teres 0-1]
Length = 1053
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 140/234 (59%), Gaps = 8/234 (3%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P+ + F ++NLS +AI + + T IQ IP L GRD+ G A TG+GKT AF
Sbjct: 569 PMANPTEFAELNLSERTRQAIDGMGFKTMTEIQQKAIPPLLAGRDVLGAAKTGSGKTLAF 628
Query: 146 MLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
++P +L +L +KPR+ T V+V+ PTREL +Q++ V R+L + S + +GG
Sbjct: 629 LIPAIEMLSQLRFKPRN--GTGVIVVSPTRELALQIFGVARELMEHHSQTFGICIGGANR 686
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
+ LRK +++IATPGRLLDHLHNT F ++ LV+DEADR+L+ F +M+ II
Sbjct: 687 SAEAEKLRKGVNLLIATPGRLLDHLHNTQGFVFKNLRSLVIDEADRILEVGFEDEMRSII 746
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSL-TRPVRVFVDNN--HEVALNLRQEFV 313
++ RQTMLFSAT T V DL +SL P+ + VD+ H L Q +V
Sbjct: 747 KILPTERQTMLFSATQTTKVEDLARISLKAGPLYINVDHRAEHSTVQGLEQGYV 800
>gi|294775629|ref|ZP_06741138.1| ATP-dependent RNA helicase RhlE [Bacteroides vulgatus PC510]
gi|345518166|ref|ZP_08797621.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 4_3_47FAA]
gi|423314906|ref|ZP_17292838.1| hypothetical protein HMPREF1058_03450 [Bacteroides vulgatus
CL09T03C04]
gi|254836435|gb|EET16744.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 4_3_47FAA]
gi|294450571|gb|EFG19062.1| ATP-dependent RNA helicase RhlE [Bacteroides vulgatus PC510]
gi|392681088|gb|EIY74450.1| hypothetical protein HMPREF1058_03450 [Bacteroides vulgatus
CL09T03C04]
Length = 434
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 132/219 (60%), Gaps = 2/219 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A +T V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDHKKGIKALILTPTRELAIQIGENFDQYAGYTGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ FSATM + L LT P ++ V +RQ
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPEKIEVTPVSSTVDTIRQ 218
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 144/252 (57%), Gaps = 10/252 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
++ + + L K L + PT IQ IP+ L G+DI G A TG+GKTAAF +PIL+
Sbjct: 24 TWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEGKDIIGLAETGSGKTAAFAIPILQ 83
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q +L K
Sbjct: 84 ALLENP---QRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALLLAK 140
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+ R R+T
Sbjct: 141 KPHILIATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRT 200
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVL 327
+LFSATMT V L SL PV+V V ++ L+Q + V F ++ V + N L
Sbjct: 201 LLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYVFIPVKFKDVYLVHILNEL 260
Query: 328 G---LMLLRENC 336
M+ C
Sbjct: 261 AGNSFMIFCATC 272
>gi|406915896|gb|EKD54936.1| hypothetical protein ACD_60C00032G0020 [uncultured bacterium]
Length = 457
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 132/221 (59%), Gaps = 2/221 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + NL+ + KAI A Y PTP+QA +IP L G+D+ A TGTGKTA+F+LP L
Sbjct: 2 TFAEFNLNPHIFKAIDACGYKNPTPVQAKSIPEILQGKDVVASAQTGTGKTASFVLPALH 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R L + R+L+L PTREL Q+ + +F V +A VGG+ + Q L K
Sbjct: 62 R-LSTSKASHKPRILILTPTRELATQITTAVTKYGKFLRVNIASLVGGMPYRQQLRSLSK 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI++ATPGRLLDH+ N LS IE+LVLDEADRMLD F ++EI R +RQT
Sbjct: 121 PVDIIVATPGRLLDHMSNR-RLDLSAIEMLVLDEADRMLDMGFIDDVQEIARATPASRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+LFSAT+ ++ +++ L PV++ N + + QE
Sbjct: 180 LLFSATVDKRLSHIINRLLKNPVQINFSNEQLTPVKISQEL 220
>gi|390570352|ref|ZP_10250619.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
gi|389937684|gb|EIM99545.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
terrae BS001]
Length = 486
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 134/226 (59%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
N++F Q L +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA F LPI
Sbjct: 10 NATFDQFGLHADILKAIAEQGYTTPTPIQAEAIPVVLGGRDVMGAAQTGTGKTAGFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + R L+L PTREL QV + A+ TS+ A+ GG+++
Sbjct: 70 IQRLLPLASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTSLRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QSAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
RQT+LFSAT + + L S L P + V ++ A N+ Q
Sbjct: 189 LPAERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQ 234
>gi|77359594|ref|YP_339169.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis TAC125]
gi|76874505|emb|CAI85726.1| putative ATP-dependent RNA helicase(rhlE-like) ; DEAD-box protein
family [Pseudoalteromonas haloplanktis TAC125]
Length = 432
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 152/269 (56%), Gaps = 10/269 (3%)
Query: 70 EYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGR 129
EYE N F A P+ ++F +NL LL AI NY PT IQ TIP L G
Sbjct: 3 EYEYNSALCHF--KAKPMSA-TTFSSLNLDPLLLTAIEQNNYTQPTAIQIKTIPPILAGS 59
Query: 130 DICGCAATGTGKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQ 187
D+ G A TGTGKTAAF+LP+L +LL P+ D+ RV++L PTREL QV+ + AQ
Sbjct: 60 DVMGSAQTGTGKTAAFVLPLLHKLLNTPKKDEPGVARVVILTPTRELAQQVFASFEKYAQ 119
Query: 188 FTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEAD 247
T+++ AL+ GG + Q L+ +++ATPGRLLDH+ S LS ++ LV DEAD
Sbjct: 120 GTNIKGALAYGGASIGPQIKALKDA-QVIVATPGRLLDHIVKG-SVVLSSVDSLVFDEAD 177
Query: 248 RMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALN 307
RMLD F ++K I+R RQT+LFSAT D+V L L P V VD + A+
Sbjct: 178 RMLDMGFIDEIKRILRHIPGDRQTLLFSATFDDSVFALSKKLLKNPELVEVDKRNSAAVE 237
Query: 308 LRQEFVSFSNIDEVRLYNVLGLMLLRENC 336
+ Q S +DE R ++ M+ +N
Sbjct: 238 VEQVIYS---VDEDRKRELVSHMIGMKNW 263
>gi|404492159|ref|YP_006716265.1| ATP-dependent RNA helicase RhlE [Pelobacter carbinolicus DSM 2380]
gi|77544268|gb|ABA87830.1| ATP-dependent RNA helicase RhlE [Pelobacter carbinolicus DSM 2380]
Length = 432
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F+ N + K I A Y+ PTPIQA IP + GRD+ G A TGTGKTAAF LPIL+R
Sbjct: 3 FNSFNFHPQVAKGIVAAGYVTPTPIQAQAIPSVIDGRDVMGLAQTGTGKTAAFALPILQR 62
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ PR R LV+ PTREL Q++Q +L + T + GG+ ++ Q + L++
Sbjct: 63 LIDGPRG--RLRALVVAPTRELAEQIHQAIGELGRHTGLRSMTVYGGVNIRPQIAGLKRG 120
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
DIV+A PGRL+DH+ + LS+IEVLVLDEAD+M D F +++I+R RQT+
Sbjct: 121 VDIVVACPGRLIDHIGQK-TIDLSNIEVLVLDEADQMFDMGFFPAVRQILRHVPAQRQTL 179
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
LFSATM A+ L LT P+ V V N
Sbjct: 180 LFSATMPAAIRRLSGEVLTSPMTVQVGNT 208
>gi|409399588|ref|ZP_11249862.1| ATP-dependent RNA helicase [Acidocella sp. MX-AZ02]
gi|409131306|gb|EKN01017.1| ATP-dependent RNA helicase [Acidocella sp. MX-AZ02]
Length = 549
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 133/237 (56%), Gaps = 1/237 (0%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
AP EE F + LS P+L A+ Y++ TPIQA IPV L+GRD+ G A TGTGKTA
Sbjct: 27 APAPEEKPDFASLGLSEPILNALAEKGYVHATPIQAQAIPVVLMGRDVLGVAQTGTGKTA 86
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
F LP+LE L + R L+L PTREL +QV + Q + + AL +GG +
Sbjct: 87 GFTLPMLEILAGSRARARMPRSLILEPTRELALQVAENFVQYGKNLKLNHALLIGGESMA 146
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q++VL K D++IATPGRL+D L L D+ VLV+DEADRMLD F ++ I+
Sbjct: 147 DQKAVLTKGVDVLIATPGRLID-LFERGGLLLRDVRVLVIDEADRMLDMGFIPDIERIVA 205
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
+ TRQT+ FSATM + L L+ P + V VA + S ID+
Sbjct: 206 MLPTTRQTLFFSATMAPEIRRLADAFLSNPKEITVSRQASVATTITTGLALVSEIDK 262
>gi|259155174|ref|NP_001158829.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
gi|223647616|gb|ACN10566.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
Length = 875
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 144/246 (58%), Gaps = 6/246 (2%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K + Y PTPIQ TIPV L G+D+ A TG+GKTAAF++
Sbjct: 74 KKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDMVAMARTGSGKTAAFLV 133
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ E+L P+ R L+L PTREL +Q + T++L +FT ++ AL +GG + Q +
Sbjct: 134 PMFEKLKV-PQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTALILGGDRMDDQFA 192
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L +E +V DEADR+ + FA Q++EIIR
Sbjct: 193 ALHENPDIIIGTPGRLM-HVVMEMNLKLQSVEYVVFDEADRLFEMGFADQLQEIIRRLPD 251
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
RQT+LFSAT+ + + LT PV + +D + +++ L+ F D+ L
Sbjct: 252 NRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSELLKLSFFHLRMDDKPALL--- 308
Query: 328 GLMLLR 333
L LLR
Sbjct: 309 -LHLLR 313
>gi|242222657|ref|XP_002477039.1| predicted protein [Postia placenta Mad-698-R]
gi|220723636|gb|EED77767.1| predicted protein [Postia placenta Mad-698-R]
Length = 389
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 138/249 (55%), Gaps = 7/249 (2%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
+P +F + L PLL+A+ LN+ PT IQ +P AL GRDI G A+TG+GKTA
Sbjct: 12 SPSQAPAPTFKSLGLIDPLLEALEQLNFKIPTEIQVQALPHALQGRDIIGVASTGSGKTA 71
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL++L +P+ ++ PTREL Q+ Q L V VGG++
Sbjct: 72 AFALPILQKLWEEPK---GLFACIMAPTRELAYQISQQIEALGSAMGVRCVTLVGGMDKM 128
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P IV+ATPGRL DHL +T FSL ++ LVLDEADR+LD F + +I++
Sbjct: 129 AQAVALAKRPHIVVATPGRLNDHLEDTKGFSLRGLKFLVLDEADRLLDMDFGPIIDKILK 188
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF----SNID 319
R R T LFSATMT V L SL+ PVRV V + L Q ++ ++
Sbjct: 189 AIPRERTTYLFSATMTTKVAKLQRASLSNPVRVEVSEKYSTVSTLLQYYLFIPLVQKDVH 248
Query: 320 EVRLYNVLG 328
+ L N+L
Sbjct: 249 LIYLANILA 257
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 136/225 (60%), Gaps = 1/225 (0%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
EN++F + L+ L +A L + PT IQ +IP+AL G+D+ G A TG+GKTAAF LP
Sbjct: 79 ENATFADLGLAEVLCEACATLKFTKPTEIQRRSIPLALQGKDVIGLAETGSGKTAAFALP 138
Query: 149 ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+L LL + + LVL PTREL Q+ Q L ++ A+ VGG+++ Q
Sbjct: 139 VLHDLL-ATKGKKEFFALVLAPTRELAFQIRQTFNALGSPIGLKSAVLVGGIDMTTQAIA 197
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K P ++IATPGRL+DHL NT F L + L++DEADRML+ + ++ +I+ + R
Sbjct: 198 LAKKPHVLIATPGRLVDHLENTKGFHLKALRYLIMDEADRMLNMDYEKELDKILAVIPRE 257
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L SL PV+V V++ ++ L Q ++
Sbjct: 258 RRTFLFSATMTSKVGKLQRASLRDPVKVEVNSKYKTVDTLIQRYM 302
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 132/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF LPIL
Sbjct: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILN 84
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + L V A+ VGG++ Q L K
Sbjct: 85 ALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVHCAVIVGGIDSMSQSLALAK 141
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R R+T
Sbjct: 142 KPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKT 201
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 202 FLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
S+F M L++ LL+AI + PTPIQ TIP+ L GRD+ G A TG+GKTAAF++P++
Sbjct: 69 SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
E L + NTR L+L P REL +Q +V + ++ T + VGG+ ++ Q S+L
Sbjct: 129 EH-LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLS 187
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
PDIV+ATPGR L HL LS IE +V DEADR+ + FA+Q+ EI+ +RQ
Sbjct: 188 GKPDIVVATPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQ 246
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
T+LFSAT+ + D L PV V +D +V+ +L+ F S
Sbjct: 247 TLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFS 290
>gi|365097957|ref|ZP_09331724.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
gi|363413202|gb|EHL20410.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
NO-1]
Length = 505
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 144/244 (59%), Gaps = 7/244 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF ++L+ PL +A+ + Y TPIQA IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+RLL + R LVL+PTREL QV Q A++T + + GG+++K
Sbjct: 62 LQRLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTIELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSF 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR-L 323
+ R T+LFSAT + + L S L PV + V +E A + Q F S + D+ R +
Sbjct: 181 LPKQRTTLLFSATFSPEIKRLASSYLQNPVTIEVARPNETASTVEQRFYSAGDDDKRRAI 240
Query: 324 YNVL 327
+ VL
Sbjct: 241 HQVL 244
>gi|353241604|emb|CCA73408.1| probable DEAD box protein (putative RNA helicase) [Piriformospora
indica DSM 11827]
Length = 458
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 135/238 (56%), Gaps = 9/238 (3%)
Query: 82 EDAPPVEENSS------FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
E P + ENS F+ + L LL+ + AL Y T IQA IP AL RDI G A
Sbjct: 16 EPNPLLAENSGEVSETPFNTLGLIPELLQTVEALGYKNATSIQAQAIPSALQDRDIIGVA 75
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TG+GKTAAF LPIL++ P+ +L PTREL Q+ + L V
Sbjct: 76 KTGSGKTAAFALPILQKWWEDPKP---LYACILAPTRELAYQIQKQFEALGANLGVRCCC 132
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGGL++ Q+ L K P IV+ATPGRL DHL NT FSL ++ LVLDEADR+LD F
Sbjct: 133 IVGGLDIMAQKVALAKRPHIVVATPGRLQDHLENTKGFSLRSLKYLVLDEADRLLDMDFG 192
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ +I+++ + R+TMLFSATM+ V L SL PV+V V + + L+Q +V
Sbjct: 193 PIIDKILKVIPKERRTMLFSATMSTKVKRLQRASLVNPVKVEVSSKYSTVSTLQQYYV 250
>gi|302822183|ref|XP_002992751.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
gi|300139492|gb|EFJ06232.1| hypothetical protein SELMODRAFT_448879 [Selaginella moellendorffii]
Length = 733
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 132/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ + L+ A L + PTPIQ +P+AL GRD+ G A TG+GKTAAF LPIL+
Sbjct: 175 SFGELGVREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTAAFALPILQ 234
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + VL PTREL +Q+ + L V VGG+ + Q L K
Sbjct: 235 ALF---QQCHPFFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGK 291
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P IV+ATPGRLLDHL NT FSL +++ LVLDEAD++L F ++ EI+++ R R+T
Sbjct: 292 NPHIVVATPGRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEILKVVPRERKT 351
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT+ V L L P +V V + + AL L+QE+V
Sbjct: 352 FLFSATMTNKVAKLQRACLRNPTKVEVSSKYTTALTLKQEYV 393
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 152/282 (53%), Gaps = 15/282 (5%)
Query: 67 EAEEYEENEGGKEFFEDAPPVEENS-----SFHQMNLSRPLLKAIGALNYIYPTPIQAAT 121
++ + EEN G + E+ EN S+ + L L A L + P+ IQ
Sbjct: 27 DSSDQEENGSGTDVDEEQDGQAENGTDVSKSWEDLGLIDTLCTACRGLKWKAPSKIQREA 86
Query: 122 IPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQV 181
IP+AL G+DI G A TG+GKT AF LPIL+ LL P Q +VL PTREL Q+ +
Sbjct: 87 IPLALQGKDIIGLAETGSGKTGAFALPILQALLDNP---QRYFAVVLTPTRELAYQISEQ 143
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
L V+ + VGG+++ Q L + P I+IATPGRL+DHL NT FSL I L
Sbjct: 144 FEALGATIGVKCCVIVGGMDLVTQAIQLARKPHIIIATPGRLVDHLENTKGFSLKAIRYL 203
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNN 301
V+DEADR+L+ F ++ +I+++ R R+T LFSATMT V L SL PV+V V +
Sbjct: 204 VMDEADRILNMDFEEEVNKILKVMPRERRTFLFSATMTKKVKKLERASLRDPVKVEVSSK 263
Query: 302 HEVALNLRQEFV----SFSNIDEVRLYNVLG---LMLLRENC 336
++ L Q ++ + N+ V + N L M+ C
Sbjct: 264 YQTVEKLLQYYLFIPARYKNVYLVHVLNELAGNSFMIFCSTC 305
>gi|50302969|ref|XP_451422.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607669|sp|Q6CXB7.1|HAS1_KLULA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49640553|emb|CAH03010.1| KLLA0A09669p [Kluyveromyces lactis]
Length = 497
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 139/220 (63%), Gaps = 7/220 (3%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E SF + LS +KAIG + + T +Q TIP L G+D+ G A TG+GKT AF++
Sbjct: 31 EVEGSFSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLI 90
Query: 148 P---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
P +L L +KPR+ T V+V+ PTREL +Q++ V R+L +F S + +GG +
Sbjct: 91 PAIEMLHSLKFKPRN--GTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQ 148
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR- 263
+ L K +I+IATPGRLLDHL NT F +++ LV+DEADR+L+ F +M++II+
Sbjct: 149 EADKLMKGVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKI 208
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
L + RQ+MLFSAT T V DL +SL RP +F++ + E
Sbjct: 209 LPNEDRQSMLFSATQTTKVEDLARISL-RPGPLFINVDSE 247
>gi|449550754|gb|EMD41718.1| hypothetical protein CERSUDRAFT_79353 [Ceriporiopsis subvermispora
B]
Length = 561
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 149/248 (60%), Gaps = 19/248 (7%)
Query: 82 EDAP---PVEENS-----SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICG 133
EDAP PV + S SF ++ LS P ++A+ + + TPIQ +IP L GRD+ G
Sbjct: 4 EDAPAPVPVPQESVPGRKSFSELELSEPTMRALQEMGFTTMTPIQEKSIPALLTGRDVLG 63
Query: 134 CAATGTGKTAAFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTS 190
A TG+GKT AF++P +L R+ +KPR+ T ++++ PTREL +Q++ V ++L S
Sbjct: 64 AARTGSGKTLAFLIPAIELLHRMKFKPRN--GTGIIIVSPTRELALQIFGVAKELMAHHS 121
Query: 191 VEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRML 250
+ +GG + + L+K ++++ATPGRLLDHL +T F +++ LV+DEADR+L
Sbjct: 122 QTFGIVMGGANRRAEAEKLQKGVNLIVATPGRLLDHLQDTKGFVFRNLKALVIDEADRIL 181
Query: 251 DEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVA 305
+ F +MK II L + RQ+MLFSAT T V DL +SL RP +++D N
Sbjct: 182 EVGFEEEMKRIINILPTENRQSMLFSATQTTKVTDLARISL-RPGPLYIDVDKTENTSTV 240
Query: 306 LNLRQEFV 313
L Q +V
Sbjct: 241 ATLSQGYV 248
>gi|312070907|ref|XP_003138363.1| hypothetical protein LOAG_02778 [Loa loa]
Length = 463
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 103/130 (79%), Gaps = 1/130 (0%)
Query: 185 LAQFTSVEVAL-SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVL 243
L F SV+ L GL++K QE+ LR+ PDIVIATPGRL+DHLHN P+FSL ++E+LVL
Sbjct: 13 LGVFKSVQTTLYDECGLDLKTQEAALRQRPDIVIATPGRLIDHLHNAPNFSLVNVEILVL 72
Query: 244 DEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
DEADRMLDE FA QMKEII LC++ RQTMLFSATMTD V +L +VSL PV++F+ N E
Sbjct: 73 DEADRMLDEAFADQMKEIIHLCAQNRQTMLFSATMTDQVEELAAVSLKNPVKLFITGNTE 132
Query: 304 VALNLRQEFV 313
ALNLRQEFV
Sbjct: 133 TALNLRQEFV 142
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 137/222 (61%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++NL LL++I + + PTPIQ+ +IP AL G+DI G A TG+GKTAAF +PIL+
Sbjct: 69 TFKELNLVPDLLESIENMKFTKPTPIQSESIPHALEGKDIIGLAQTGSGKTAAFAIPILQ 128
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + Q LVL PTREL Q+ + L + + VGG+++ Q L +
Sbjct: 129 SLWHA---QQPYFGLVLAPTRELAFQIKETFDALGSSMGLRSSCIVGGMDMMDQARDLMR 185
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGR++DHL +T F+L +++ LV+DEADR+LD F + +I+++ R T
Sbjct: 186 KPHIIVATPGRIMDHLEHTKGFTLKNLKYLVMDEADRLLDMDFGPALDKILKVIPTKRTT 245
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT+ + L SL PVRV V + ++ A NL Q +
Sbjct: 246 YLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMM 287
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 144/252 (57%), Gaps = 10/252 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
++ + + L K L + PT IQ IP+ L G+D+ G A TG+GKTAAF +PIL+
Sbjct: 19 TWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEGKDVIGLAETGSGKTAAFAIPILQ 78
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q +L K
Sbjct: 79 ALLENP---QRYFALILTPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALLLAK 135
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+R+ R R+T
Sbjct: 136 KPHILIATPGRLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRT 195
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVL 327
+LFSATMT V L SL PV+V V ++ L+Q + V F ++ V + N L
Sbjct: 196 LLFSATMTKKVQKLQRASLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNEL 255
Query: 328 G---LMLLRENC 336
M+ C
Sbjct: 256 AGNSFMIFCATC 267
>gi|348689923|gb|EGZ29737.1| hypothetical protein PHYSODRAFT_309945 [Phytophthora sojae]
Length = 482
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 135/232 (58%), Gaps = 3/232 (1%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
ED + SF ++ + + +AI A+ + P+ IQ IP L G+DI G A TG+GK
Sbjct: 22 EDGEGFRGSKSFQELGVDAAICEAIEAVGWSQPSKIQQQAIPHGLAGKDIIGLAETGSGK 81
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF++PIL+ LL R+ Q LVL PTREL Q+ + L ++ A VGG++
Sbjct: 82 TGAFVIPILQSLL---RNPQRLYALVLAPTRELAYQIGEQFEALGASIGLKCACVVGGID 138
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q+ L + P +VIATPGRL+DHL NT FSL ++ LVLDEADRML F ++ +I
Sbjct: 139 MMQQQVALARKPHVVIATPGRLVDHLENTKGFSLRTMKFLVLDEADRMLSMDFEEEINQI 198
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++L R T LFSATMT V L SL PV+V + + L+Q ++
Sbjct: 199 VQLMPAERNTYLFSATMTSKVRKLQRASLKDPVKVEITHKFATPETLKQHYL 250
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
++ +F + L + L+ A L + P+ IQ +IP AL GRD+ G A TG+GKT AF L
Sbjct: 16 DKKPTFASLGLCKELVSACEELGWREPSAIQQKSIPEALQGRDVIGLAQTGSGKTGAFAL 75
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL +PR + L+L PTREL +Q+ + L + V A VGG+E+ Q
Sbjct: 76 PILQSLLDEPRTYHS---LILSPTRELAIQIAEQVEALGRGIGVRTATLVGGIEMTSQAI 132
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+L K P +V+ TPGR++DHL NT F L ++VLVLDEADR+L+ F ++ +I+R+ +
Sbjct: 133 MLGKRPHVVVGTPGRVVDHLENTKGFGLKALKVLVLDEADRLLNLDFEEEIDKILRVIPQ 192
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L L PV+V V + +LRQ ++
Sbjct: 193 DRRTQLFSATMTSKVQKLQRACLRDPVKVEVSAKYSTVDSLRQHYL 238
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 6/230 (2%)
Query: 86 PVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAF 145
P E+ +F L +L+A+ Y PTPIQAA IPV + GRD+ G A TGTGKTA F
Sbjct: 10 PANESVTFDTFGLHPDILRALAESGYTRPTPIQAAAIPVVVAGRDVMGAAQTGTGKTAGF 69
Query: 146 MLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
LPI++ LL + + R L+L PTREL QVY + ++T++ A+ GG+
Sbjct: 70 SLPIIQNLLPEANTSASPARHPVRALILTPTRELADQVYDNVAKYGKYTALRSAVVFGGV 129
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
++ Q LR+ +I++ATPGRLLDH+ S +LS + +LVLDEADRMLD F ++
Sbjct: 130 DMNPQTEQLRRGVEILVATPGRLLDHVQQR-SVNLSQVRMLVLDEADRMLDMGFLPDLQR 188
Query: 261 IIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
II L RQT+LFSAT + + L + L P + V ++ A N+RQ
Sbjct: 189 IINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQ 238
>gi|433659531|ref|YP_007300390.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus BB22OP]
gi|432510918|gb|AGB11735.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus BB22OP]
Length = 522
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 129/222 (58%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R L+L PTREL QV + + + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRANQVRALILTPTRELAAQVQENVFMYGRHLPLSSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D L+N + +EVLVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LYNQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQSI 222
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 133/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + ++ L +A L + PT IQ IP+AL GRDI G A TG+GKT AF LPIL
Sbjct: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILN 84
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + L V+ A+ VGG++ Q L K
Sbjct: 85 ALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAK 141
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F +++ +I+++ R R+T
Sbjct: 142 KPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKT 201
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 202 FLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
>gi|374705810|ref|ZP_09712680.1| DEAD/DEAH box helicase [Pseudomonas sp. S9]
Length = 449
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 141/223 (63%), Gaps = 3/223 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ LN++ PTP+Q A IP AL G D+ A TG+GKTAAF+LP+L R
Sbjct: 2 FSQFALHERLLKAVAELNFVEPTPVQVAAIPAALQGHDLRVTAQTGSGKTAAFVLPMLNR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ P+ + R ++L+PTREL Q + + +QFT ++ L GG + KVQ ++LR+
Sbjct: 62 LMGDPKPRLSIRAVILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRRV 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
DI+I TPGRL++H N + L ++EVLVLDEADRMLD FA ++ + CS QT+
Sbjct: 122 -DILIGTPGRLIEH-ANAGNLLLDEVEVLVLDEADRMLDMGFAEDVQRLAEACSGPHQTL 179
Query: 273 LFSATM-TDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVS 314
LFSAT + ++V+ L PV + +++ ++ RQ+ ++
Sbjct: 180 LFSATSGGSGLREMVNKVLKEPVHLQLNSVSDLNEGTRQQIIT 222
>gi|345515892|ref|ZP_08795389.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
gi|229436523|gb|EEO46600.1| ATP-dependent RNA helicase DeaD [Bacteroides dorei 5_1_36/D4]
Length = 434
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +++L P+LKA+ Y PTPIQ IPV L G+D+ GCA TGTGKTAAF +P+++
Sbjct: 2 TFKELDLIEPILKALQQTGYTTPTPIQEQAIPVLLKGKDLLGCAQTGTGKTAAFAIPLIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R LY+ + + L+L PTREL +Q+ + Q A++ V+ A+ GG+ K Q L++
Sbjct: 62 R-LYQSDHKKGIKALILTPTRELAIQIGENFDQYAKYAGVKHAVIFGGVPQKAQVDALKR 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
++IATPGRLLD L + SL +E VLDEADRMLD F +K++++L RQT
Sbjct: 121 GVQVLIATPGRLLD-LQSQGCISLKGLEYFVLDEADRMLDMGFIHDIKKVLKLIPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L LT P +V V
Sbjct: 180 LFFSATMPSEIEKLADSMLTNPKKVEV 206
>gi|47223591|emb|CAF99200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 532
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K + Y PTPIQ TIPV L G+D+ A TG+GKTAAF++
Sbjct: 34 KKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLI 93
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ ER L P+ R L+L PTREL +Q + T++L +FT ++ AL +GG + Q +
Sbjct: 94 PMFER-LKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQFA 152
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L ++E +V DEADR+ + FA Q++EIIR
Sbjct: 153 ALHENPDIIIGTPGRLM-HVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFPE 211
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
TRQT+LFSAT+ + + LT PV + +D
Sbjct: 212 TRQTLLFSATLPKVIVEFARAGLTEPVLIRLD 243
>gi|156083174|ref|XP_001609071.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796321|gb|EDO05503.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 454
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 139/230 (60%), Gaps = 14/230 (6%)
Query: 95 QMNLSRPLLKAIG--ALNYI---------YPTPIQAATIPVALLGRDICGCAATGTGKTA 143
QM L RP L + A NY +PTPIQ A IP AL GRD+ G A TG+GKT
Sbjct: 25 QMKLQRPRLSSRWECARNYARRASPWDGRHPTPIQMAAIPHALNGRDVIGLAVTGSGKTG 84
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF +P+L LL D Q +VL P+REL Q+ + R L+ +++V + +GG+++
Sbjct: 85 AFTIPVLHHLL---EDVQRIYCVVLAPSRELCEQIAEQFRALSSSIALQVCVIIGGVDMV 141
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q S L K P +++A+PGRL DH+ NT FSLS ++ LV+DEADR+L + F ++ +II
Sbjct: 142 HQASALAKRPHVIVASPGRLADHVENTKGFSLSTVKKLVIDEADRLLSQDFDEELDKIIH 201
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
RQT LFSATMT ++ L ++L P+ V VD+ + A NL Q F+
Sbjct: 202 AMPTERQTFLFSATMTKKLSKLQKMALKDPISVQVDDKYSTAENLDQRFL 251
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 139/238 (58%), Gaps = 8/238 (3%)
Query: 81 FEDAPPVEENSSF-----HQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
F+D V++ SF ++ L +A L + PT IQ IP+AL GRDI G A
Sbjct: 26 FKDLVSVDDADSFLSCWRQAQGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLA 85
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TG+GKT AF LPIL LL P Q LVL PTREL Q+ + L V+ A+
Sbjct: 86 ETGSGKTGAFALPILNALLETP---QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAV 142
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGG++ Q L K P IVIATPGRL+DHL NT F+L ++ LV+DEADR+L+ F
Sbjct: 143 IVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 202
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+++ +I+++ R R+T+LFSATMT V L +L PV+ V + ++ L+Q ++
Sbjct: 203 TEVDKILKVIPRDRKTLLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYL 260
>gi|119499912|ref|XP_001266713.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143019652|sp|A1CW14.1|HAS1_NEOFI RecName: Full=ATP-dependent RNA helicase has1
gi|119414878|gb|EAW24816.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 622
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 141/223 (63%), Gaps = 8/223 (3%)
Query: 85 PPVE-ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
P VE E F ++ L+ LKAI + + T IQ TIP L GRD+ G A TG+GKT
Sbjct: 133 PTVEGEPQKFTELGLTEKTLKAINDMGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTL 192
Query: 144 AFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
+F++P +L L +KPR+ T V+V+ PTREL +Q++ V R+L Q+ S + +GG
Sbjct: 193 SFLIPAVEMLSALRFKPRN--GTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVIGGA 250
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
+ + L K +++IATPGRLLDHL NT F +++ LV+DEADR+L+ F +M++
Sbjct: 251 NRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQ 310
Query: 261 IIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
I++ L S RQTMLFSAT T V DL +SL RP ++++ +H
Sbjct: 311 IVKILPSEERQTMLFSATQTTKVEDLARISL-RPGPLYINVDH 352
>gi|407701321|ref|YP_006826108.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str. 'Black
Sea 11']
gi|407250468|gb|AFT79653.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str. 'Black
Sea 11']
Length = 483
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 2/206 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKAI + P+PIQ IP L G+D+ A TGTGKTA F LPIL+
Sbjct: 2 SFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPILQ 61
Query: 152 RLLY-KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ +P N R L+L PTREL QV + ++F ++ A+ GG+ + Q LR
Sbjct: 62 RLMSGQPVSGNNVRALILTPTRELAAQVEESISAFSEFLPLKTAVVFGGVGINPQMMKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLD L+ + S +EVLVLDEADRMLD F +K +++L + RQ
Sbjct: 122 KGVDVLIATPGRLLD-LYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPQERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRV 296
++LFSAT +D + L PV +
Sbjct: 181 SLLFSATFSDEITALAKTITRNPVSI 206
>gi|91224087|ref|ZP_01259350.1| ATP-dependent RNA helicase RhlE [Vibrio alginolyticus 12G01]
gi|91190998|gb|EAS77264.1| ATP-dependent RNA helicase RhlE [Vibrio alginolyticus 12G01]
Length = 517
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 129/222 (58%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R L+L PTREL QV + + + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRANQVRALILTPTRELAAQVQENVFMYGRHLPLSSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D L+N + +EVLVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LYNQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQSI 222
>gi|282599579|ref|ZP_05971084.2| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
gi|282568585|gb|EFB74120.1| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
Length = 457
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 143/255 (56%), Gaps = 7/255 (2%)
Query: 85 PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
P V +SF + L+ +L+AI L Y PTPIQ IP L G D+ A TGTGKTA
Sbjct: 3 PGVNNLTSFSDLALNEEILRAINELGYDSPTPIQQQAIPAVLAGNDLLASAQTGTGKTAG 62
Query: 145 FMLPILERLLYKPRDDQN---TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
F LPIL++L+ PR N R L+L PTREL QV + ++ ++ ++ + GG+
Sbjct: 63 FTLPILQKLVDAPRSGNNRRPIRALILTPTRELAAQVAENVKEYSRHLNIRSFVVFGGVS 122
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q LR D++IATPGRLLD H + LS +E+LVLDEADRMLD F ++ +
Sbjct: 123 INPQMMKLRSGVDVLIATPGRLLDLEHQN-AVDLSQVEILVLDEADRMLDMGFIHDIRRV 181
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEV 321
I + RQ +LFSAT +D + L S L PV + V + + + Q +V +D+
Sbjct: 182 ITKLPKKRQNLLFSATFSDDIKQLASKLLNNPVSIEVAPRNSASEQVTQ-YVHL--VDKK 238
Query: 322 RLYNVLGLMLLRENC 336
R +L M+ REN
Sbjct: 239 RKAELLSFMIGRENW 253
>gi|409407327|ref|ZP_11255778.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
gi|386433078|gb|EIJ45904.1| ATP-dependent RNA helicase [Herbaspirillum sp. GW103]
Length = 487
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 132/223 (59%), Gaps = 6/223 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F LS +LKA+ Y++PTPIQA IPV L GRD+ G A TGTGKTA F LPI++R
Sbjct: 18 FEDFGLSPDILKALSEQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQR 77
Query: 153 LLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
LL + R L+L PTREL QV + + ++FT + + GG+++ Q +
Sbjct: 78 LLAHASHSASPARHPVRALILTPTRELADQVAENVKAYSRFTPLRSTVVFGGVDMAPQTA 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
LR +IVIATPGRLLDH+ + +LS ++LV+DEADRMLD F ++ II L +
Sbjct: 138 TLRAGVEIVIATPGRLLDHVQQK-TVNLSQTQILVMDEADRMLDMGFLPDLQRIINLLPK 196
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
RQ +LFSAT + + L + PV + V ++ A N+ Q
Sbjct: 197 QRQNLLFSATFSPEIKKLAASFQNNPVTIEVARSNATAENVSQ 239
>gi|171318169|ref|ZP_02907335.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MEX-5]
gi|171096637|gb|EDT41526.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
MEX-5]
Length = 571
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 146/255 (57%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 59 GLTHDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQ 114
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 115 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELA 174
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ TS+ A+ GG+++ Q + LR+ +I+IATPGRLLDH+ + +L
Sbjct: 175 DQVAANVHAYAKHTSLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANL 233
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 234 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQT 293
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 294 IEVARSNSTNANVTQ 308
>gi|222086716|ref|YP_002545250.1| ATP-dependent RNA helicase [Agrobacterium radiobacter K84]
gi|221724164|gb|ACM27320.1| ATP-dependent RNA helicase protein [Agrobacterium radiobacter K84]
Length = 556
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 144/243 (59%), Gaps = 6/243 (2%)
Query: 80 FFEDAPPVE-ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
F APP E + FH + LS+ ++ + N+ PTPIQA IP+ L GRD+ G A TG
Sbjct: 6 LFALAPPKGIELTDFHSLGLSKQIVDTLSQNNFATPTPIQAQAIPLVLQGRDLIGLAQTG 65
Query: 139 TGKTAAFMLPILERLL--YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
TGKTAAF LPI+E LL K D++ R L+L PTREL Q+ + + T++ + +
Sbjct: 66 TGKTAAFGLPIIEMLLKDAKRPDNRTVRTLILAPTRELVNQIADNLKLFVRKTALRINVV 125
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
VGG + Q+ L + DI++ATPGRLLD L + + SL + LVLDEAD+MLD F
Sbjct: 126 VGGASINKQQLQLERGTDILVATPGRLLD-LISRRALSLGQVSYLVLDEADQMLDLGFIH 184
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVS 314
+++I ++ RQTMLFSATM + DL + LT PV+V V + A + Q FVS
Sbjct: 185 DLRKISKMVPAKRQTMLFSATMPKTIADLAAEYLTNPVKVEVSPPGKAADKVEQYVHFVS 244
Query: 315 FSN 317
N
Sbjct: 245 GQN 247
>gi|269961856|ref|ZP_06176213.1| ATP-dependent RNA helicase [Vibrio harveyi 1DA3]
gi|269833434|gb|EEZ87536.1| ATP-dependent RNA helicase [Vibrio harveyi 1DA3]
Length = 526
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R LVL PTREL QV + ++ + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRSNQVRALVLTPTRELAAQVQENVFMYSRHLPLTSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRLLD L+N + +E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLLD-LYNQNAVKFDQLEMLVLDEADRMLDMGFIRDIRKILDLLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQ 220
>gi|28900245|ref|NP_799900.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus RIMD
2210633]
gi|153837460|ref|ZP_01990127.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ3810]
gi|260361632|ref|ZP_05774659.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
K5030]
gi|260880805|ref|ZP_05893160.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AN-5034]
gi|260896485|ref|ZP_05904981.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
Peru-466]
gi|260899501|ref|ZP_05907896.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ4037]
gi|28808556|dbj|BAC61733.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus RIMD
2210633]
gi|149749260|gb|EDM60045.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ3810]
gi|308089237|gb|EFO38932.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
Peru-466]
gi|308092075|gb|EFO41770.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AN-5034]
gi|308109261|gb|EFO46801.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
AQ4037]
gi|308112745|gb|EFO50285.1| putative ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus
K5030]
Length = 522
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 129/222 (58%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R L+L PTREL QV + + + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRANQVRALILTPTRELAAQVQENVFMYGRHLPLSSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D L+N + +EVLVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LYNQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQSI 222
>gi|398791375|ref|ZP_10552120.1| DNA/RNA helicase, superfamily II [Pantoea sp. YR343]
gi|398215429|gb|EJN01992.1| DNA/RNA helicase, superfamily II [Pantoea sp. YR343]
Length = 462
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 142/248 (57%), Gaps = 7/248 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS +L+A+ Y PTPIQ IPV L GRD+ A TGTGKTA F LP+L+
Sbjct: 2 SFDSLGLSADILRAVAEQGYQEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQ 61
Query: 152 RLLYKP---RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
RL KP R + R L+L PTREL QV + R+ +Q+ + + GG+ + Q
Sbjct: 62 RLTAKPSTARGRRPVRALILTPTRELAAQVGENVREYSQYLDIRSLVVFGGVSINPQMMK 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
LR D+++ATPGRLLD H + LS +E+LVLDEADRMLD F ++ ++
Sbjct: 122 LRGGVDVLVATPGRLLDLAHQN-AVDLSQVEILVLDEADRMLDMGFIHDIRRVLARLPAK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLG 328
RQ +LFSAT +D + L LT P +V V + + + Q+ V F +D+ R +L
Sbjct: 181 RQNLLFSATFSDEIKTLAEKLLTNPEQVEVARRNTASEQVSQQ-VHF--VDKKRKRELLS 237
Query: 329 LMLLRENC 336
LM+ R+N
Sbjct: 238 LMIGRDNW 245
>gi|398800298|ref|ZP_10559570.1| DNA/RNA helicase, superfamily II [Pantoea sp. GM01]
gi|398095465|gb|EJL85801.1| DNA/RNA helicase, superfamily II [Pantoea sp. GM01]
Length = 463
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 142/248 (57%), Gaps = 7/248 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS +L+A+ Y PTPIQ IPV L GRD+ A TGTGKTA F LP+L+
Sbjct: 2 SFDSLGLSADILRAVAEQGYQEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQ 61
Query: 152 RLLYKP---RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
RL KP R + R L+L PTREL QV + R+ +Q+ + + GG+ + Q
Sbjct: 62 RLTAKPSTARGRRPVRALILTPTRELAAQVGENVREYSQYLDIRSLVVFGGVSINPQMMK 121
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
LR D+++ATPGRLLD H + LS +E+LVLDEADRMLD F ++ ++
Sbjct: 122 LRGGVDVLVATPGRLLDLAHQN-AVDLSQVEILVLDEADRMLDMGFIHDIRRVLARLPAK 180
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLG 328
RQ +LFSAT +D + L LT P +V V + + + Q+ V F +D+ R +L
Sbjct: 181 RQNLLFSATFSDEIKTLAEKLLTNPEQVEVARRNTASEQVSQQ-VHF--VDKKRKRELLS 237
Query: 329 LMLLRENC 336
LM+ R+N
Sbjct: 238 LMIGRDNW 245
>gi|298711460|emb|CBJ32599.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 848
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 133/232 (57%), Gaps = 4/232 (1%)
Query: 83 DAPPVEE-NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
D PP E+ +SF + ++ PL +A L + + T IQ +P+A G+D+ G A TG+GK
Sbjct: 397 DEPPPEDIKASFESLGVTGPLCEAAAQLGWTHATEIQRQALPLAFEGKDVIGLAETGSGK 456
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T AF LPIL+ LL P Q +++ PTREL Q+ +V L ++ VGG++
Sbjct: 457 TGAFALPILQALLENP---QRLFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGID 513
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q L P +VIATPGRL+DHL NT FSL + LVLDEADRML F ++ ++
Sbjct: 514 MFQQSVALALKPHVVIATPGRLVDHLENTKGFSLRTAKYLVLDEADRMLGMDFEEEINKV 573
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ + R R+T LFSATMT V L SL P RV V N L Q+++
Sbjct: 574 LSVLPRERRTFLFSATMTSKVAKLQRASLKNPARVEVANKFSTPKTLVQQYL 625
>gi|90577494|ref|ZP_01233305.1| putative ATP-dependent RNA helicase RhlE [Photobacterium angustum
S14]
gi|90440580|gb|EAS65760.1| putative ATP-dependent RNA helicase RhlE [Photobacterium angustum
S14]
Length = 497
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 142/246 (57%), Gaps = 5/246 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS P+L+A+ Y P+PIQ IP L G+D+ A TGTGKTA F LP+LE
Sbjct: 2 SFASLGLSAPILEAVAKQGYEKPSPIQEQAIPAILAGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 152 RLLY-KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL +P + R LVL PTREL QV + + + A+ GG++V Q +R
Sbjct: 62 RLANGRPARSNHVRALVLTPTRELAAQVGESVATYGKNLRLSSAVVFGGVKVNPQMLRMR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D LH+ + D+E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LHSQNAVKFRDVEILVLDEADRMLDMGFIRDIRKILALLPKERQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
+LFSAT +D + +L + PV + V+ ++ A ++Q +D+ + N+L +
Sbjct: 181 NLLFSATFSDEIRELAKGLVNNPVEIDVNPRNQTARTVKQWICP---VDQKKKPNLLTKL 237
Query: 331 LLRENC 336
L N
Sbjct: 238 LNERNW 243
>gi|424045995|ref|ZP_17783558.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
gi|408885826|gb|EKM24535.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
Length = 516
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R LVL PTREL QV + ++ + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRSNQVRALVLTPTRELAAQVQENVFMYSRHLPLTSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRLLD L+N + +E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLLD-LYNQNAVKFDQLEMLVLDEADRMLDMGFIRDIRKILDLLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQ 220
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 141/249 (56%), Gaps = 11/249 (4%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
APP ++F + L LL+A+ +N+ PT IQ IP AL G+DI G A+TG+GKTA
Sbjct: 12 APP----ATFKSLGLIDSLLQALEQVNHKVPTDIQTEVIPHALEGKDIIGVASTGSGKTA 67
Query: 144 AFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
AF LPIL++L +P+ VL PTREL Q+ Q L V A+ VGG+
Sbjct: 68 AFALPILQKLWEEPK---GLFACVLAPTRELAYQISQQFESLGSDMGVRCAVIVGGVPTV 124
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
Q L K P +V+ATPGRLL HL T F L++++ LVLDEADR+LD F + +I++
Sbjct: 125 PQAVALAKKPHVVVATPGRLLWHLQETKGFGLANLKFLVLDEADRLLDMDFGQVIDDILK 184
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF----SNID 319
+ + R T LFSATMT V L SL PVRV V ++ L Q ++ +++
Sbjct: 185 VIPKQRTTYLFSATMTSKVAKLQRASLKNPVRVEVAGKYQTVSTLLQYYLFIPLKDKDVN 244
Query: 320 EVRLYNVLG 328
V L N L
Sbjct: 245 LVYLVNALA 253
>gi|417322060|ref|ZP_12108594.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus 10329]
gi|328470214|gb|EGF41125.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus 10329]
Length = 522
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 129/222 (58%), Gaps = 2/222 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R L+L PTREL QV + + + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRANQVRALILTPTRELAAQVQENVFMYGRHLPLSSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D L+N + +EVLVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LYNQNAVKFDQLEVLVLDEADRMLDMGFIRDIRKILALLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQSI 222
>gi|328848641|gb|EGF97845.1| hypothetical protein MELLADRAFT_46164 [Melampsora larici-populina
98AG31]
Length = 659
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 161/277 (58%), Gaps = 22/277 (7%)
Query: 53 KQKRLAKEGKLKQVEAEEYEENEGGKE---FFE------DAPPVEENSSFHQMNLSRPLL 103
K KR K GK K A+E G + F E D P V E F +NLS
Sbjct: 84 KHKRKQKNGKRKD-NADEGSPATAGPDLTTFAESSASASDKPLVTE---FTSLNLSPGTA 139
Query: 104 KAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---ILERLLYKPRDD 160
KAI + + + T +QA TIP + GRD+ G A TG+GKT AF++P +L RL +KPR+
Sbjct: 140 KAIEEMGFKHMTEVQARTIPPLMTGRDVLGAARTGSGKTLAFLVPAVEMLSRLQFKPRN- 198
Query: 161 QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATP 220
T +++ PTREL +Q++ V ++L + S A+++GG K + L K +++I+TP
Sbjct: 199 -GTGAIIVSPTRELALQIFGVAQELMKHHSQTFAITIGGANRKAEAEKLIKGVNLLISTP 257
Query: 221 GRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQTMLFSATMT 279
GRLLDHL NT F S+++ L++DEADR+L+ F +M++II L S RQ+MLFSAT T
Sbjct: 258 GRLLDHLQNTKGFVFSNLKALIIDEADRILEIGFEDEMRKIISLLPSENRQSMLFSATQT 317
Query: 280 DAVNDLVSVSL-TRPVRVFVDNNHEVAL--NLRQEFV 313
V DL +SL P+ + VD N + A L Q +V
Sbjct: 318 TKVQDLARISLRPGPLYINVDANKQDATVQGLEQGYV 354
>gi|398379083|ref|ZP_10537228.1| DNA/RNA helicase, superfamily II [Rhizobium sp. AP16]
gi|397723550|gb|EJK84044.1| DNA/RNA helicase, superfamily II [Rhizobium sp. AP16]
Length = 580
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 144/243 (59%), Gaps = 6/243 (2%)
Query: 80 FFEDAPPVE-ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
F APP E + FH + LS+ ++ + N+ PTPIQA IP+ L GRD+ G A TG
Sbjct: 32 LFALAPPKGIELTDFHSLGLSKQIVDTLSQNNFATPTPIQAQAIPLVLQGRDLIGLAQTG 91
Query: 139 TGKTAAFMLPILERLL--YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
TGKTAAF LPI+E LL K D++ R L+L PTREL Q+ + + T++ + +
Sbjct: 92 TGKTAAFGLPIIEMLLKDAKRPDNRTVRTLILAPTRELVNQIADNLKLFVRKTALRINVV 151
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
VGG + Q+ L + DI++ATPGRLLD L + + SL + LVLDEAD+MLD F
Sbjct: 152 VGGASINKQQLQLERGTDILVATPGRLLD-LISRRALSLGQVSYLVLDEADQMLDLGFIH 210
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVS 314
+++I ++ RQTMLFSATM + DL + LT PV+V V + A + Q FVS
Sbjct: 211 DLRKISKMVPAKRQTMLFSATMPKTIADLAAEYLTNPVKVEVSPPGKAADKVEQYVHFVS 270
Query: 315 FSN 317
N
Sbjct: 271 GQN 273
>gi|421868011|ref|ZP_16299663.1| ATP-dependent RNA helicase Bcep18194_A5658 [Burkholderia
cenocepacia H111]
gi|358071942|emb|CCE50541.1| ATP-dependent RNA helicase Bcep18194_A5658 [Burkholderia
cenocepacia H111]
Length = 494
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 138/232 (59%), Gaps = 8/232 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A PV+ ++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 6 AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTA 63
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ T + A+ G
Sbjct: 64 SFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 123
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 124 GVDMNPQSAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 182
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ I+ L + RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 183 QRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 139/231 (60%), Gaps = 5/231 (2%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
+DAP EE +F + ++ L +A L + P+ IQ +IPVAL G D+ G A TG+GK
Sbjct: 20 DDAP--EETVTFKSLGVTDVLCEACEILGWKAPSKIQKESIPVALQGSDVIGLAETGSGK 77
Query: 142 TAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
T +F LP+L+ LL P Q LVL PTREL Q+ + L V+ A+ VGG++
Sbjct: 78 TGSFALPVLQTLLDNP---QRMYCLVLTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 134
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q VL K P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I
Sbjct: 135 MMTQSMVLAKKPHIIIATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFEQEVNKI 194
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
+++ + R+T L+SATMT V L L PV+V V ++ L+Q +
Sbjct: 195 LKVIPKERKTYLYSATMTSKVAKLQRACLKNPVKVEVSTKYQTVDKLQQSY 245
>gi|432885906|ref|XP_004074815.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Oryzias
latipes]
Length = 852
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K + Y PTPIQ TIPV L G+D+ A TG+GKTAAF++
Sbjct: 74 KKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLV 133
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ E+ L P+ R L++ PTREL +Q + T++L +F ++ AL +GG ++ Q +
Sbjct: 134 PMFEK-LKAPQASAGARALIMSPTRELALQTMKFTKELGKFAGLKTALILGGDRMEDQFA 192
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L +E +V DEADR+ + FA Q++EII+
Sbjct: 193 ALHENPDIIIGTPGRLM-HVVKEMNLKLHSVEYVVFDEADRLFEMGFAEQLQEIIQRLPD 251
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
TRQT+LFSAT+ + + LT PV + +D + +++ ++ F
Sbjct: 252 TRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSF 296
>gi|288959250|ref|YP_003449591.1| ATP-dependent RNA helicase [Azospirillum sp. B510]
gi|288911558|dbj|BAI73047.1| ATP-dependent RNA helicase [Azospirillum sp. B510]
Length = 456
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ L +LKA+ A Y PTP+Q A IP AL GRDI A TGTGKTAAFMLP L
Sbjct: 2 SFSELGLHPLVLKALEAFEYTTPTPVQLAAIPPALQGRDILATAETGTGKTAAFMLPALT 61
Query: 152 RLLYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
R P + T RVLVL PTREL QV R+ A+F + + VGG+ + Q +L
Sbjct: 62 RTAELPLNGAATPRVLVLAPTRELAKQVTDAARKYAKFMKLNIVDVVGGMPYREQLRLLS 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ D+++ATPGRLLDH+ +L ++EVL+LDEADRMLD F ++ I + C TRQ
Sbjct: 122 RPVDVLVATPGRLLDHVARR-RIALDEVEVLILDEADRMLDMGFLDDVETIAKCCPPTRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
T+LF+AT+ + L L P RV V++ ++N+ Q ++D R
Sbjct: 181 TLLFTATLDRRMAQLAGNLLRNPERVAVESQ-ATSVNVEQRLHHADDMDHKR 231
>gi|206560771|ref|YP_002231536.1| putative ATP-dependent RNA helicase 2 [Burkholderia cenocepacia
J2315]
gi|444363801|ref|ZP_21164182.1| DEAD/DEAH box helicase [Burkholderia cenocepacia BC7]
gi|444368994|ref|ZP_21168777.1| DEAD/DEAH box helicase [Burkholderia cenocepacia K56-2Valvano]
gi|198036813|emb|CAR52713.1| putative ATP-dependent RNA helicase 2 [Burkholderia cenocepacia
J2315]
gi|443594238|gb|ELT62906.1| DEAD/DEAH box helicase [Burkholderia cenocepacia BC7]
gi|443599860|gb|ELT68103.1| DEAD/DEAH box helicase [Burkholderia cenocepacia K56-2Valvano]
Length = 494
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 138/232 (59%), Gaps = 8/232 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A PV+ ++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 6 AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTA 63
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ T + A+ G
Sbjct: 64 SFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 123
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 124 GVDMNPQSAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 182
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ I+ L + RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 183 QRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E ++SF ++ ++ L +A L + PT IQ IPVAL GRD+ G A TG+GKT AF +
Sbjct: 76 EIHTSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAV 135
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L+ LL Q LVL PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 136 PVLQSLLACA---QRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQAL 192
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
VL K P +VIATPGRL+DH+ NT F+L ++ LV+DEADR+L+ F S++ +I+++ R
Sbjct: 193 VLAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPR 252
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L +L PV+ V + + L+Q ++
Sbjct: 253 DRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYI 298
>gi|432885908|ref|XP_004074816.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Oryzias
latipes]
Length = 853
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K + Y PTPIQ TIPV L G+D+ A TG+GKTAAF++
Sbjct: 75 KKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLV 134
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ E+ L P+ R L++ PTREL +Q + T++L +F ++ AL +GG ++ Q +
Sbjct: 135 PMFEK-LKAPQASAGARALIMSPTRELALQTMKFTKELGKFAGLKTALILGGDRMEDQFA 193
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L +E +V DEADR+ + FA Q++EII+
Sbjct: 194 ALHENPDIIIGTPGRLM-HVVKEMNLKLHSVEYVVFDEADRLFEMGFAEQLQEIIQRLPD 252
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
TRQT+LFSAT+ + + LT PV + +D + +++ ++ F
Sbjct: 253 TRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSF 297
>gi|429216159|ref|ZP_19207318.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
gi|428153812|gb|EKX00366.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
Length = 441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 135/221 (61%), Gaps = 1/221 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q L LLKA+ L++ PT +QAA IP AL GRD+ A TG+GKTAAF+LP+L R
Sbjct: 2 FAQFALHERLLKALETLSFTEPTAVQAAAIPKALEGRDLRVTAQTGSGKTAAFVLPLLHR 61
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
LL + + R L+L+PTREL Q + + AQFT ++ L GG + KVQ + LRK
Sbjct: 62 LLSEEKPKTGARALILLPTRELAQQTLKEVERFAQFTFIKACLITGGEDFKVQGARLRKN 121
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P+I+I TPGRL + N + L D+EVLVLDEADRMLD FA + ++ C RQT+
Sbjct: 122 PEIIIGTPGRLNEQF-NAGNLPLGDVEVLVLDEADRMLDMGFAEDVLKLAGACPAQRQTL 180
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSAT ++ +V L P + ++ E+ ++ Q+ +
Sbjct: 181 LFSATAGSGLHAMVEQVLREPESLQLNRVSELNEDIAQQVI 221
>gi|256827018|ref|YP_003150977.1| DNA/RNA helicase, superfamily II [Cryptobacterium curtum DSM 15641]
gi|256583161|gb|ACU94295.1| DNA/RNA helicase, superfamily II [Cryptobacterium curtum DSM 15641]
Length = 551
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/243 (41%), Positives = 139/243 (57%), Gaps = 6/243 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+FH + LS L A+ L Y PTP+Q IP L GRD+ A TGTGKTAAF LP ++
Sbjct: 4 TFHDLGLSEKALAAVDLLGYTDPTPVQEQAIPAVLAGRDVIAAAKTGTGKTAAFSLPTMD 63
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + R Q +L++ PTREL +Q+ V R +A+ + V VGG+ Q LR+
Sbjct: 64 RLGH-ARHGQGPLLLIVTPTRELALQIESVCRTIAKRSGHRVTCVVGGVSYNPQIDSLRR 122
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGRL+D L N + L+ +E LVLDEADRMLD F M+ I+ C RQT
Sbjct: 123 GTDVLIATPGRLID-LMNQDAAHLNQVETLVLDEADRMLDMGFLPDMRRIVAACPTQRQT 181
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLML 331
+LFSAT+ A+ D ++ L PV V + + E A + Q + + R N L + L
Sbjct: 182 LLFSATIDSAIEDNMAHLLNNPVFVEIAHRGETADTIEQYRIPVDH----RHKNDLLIAL 237
Query: 332 LRE 334
L E
Sbjct: 238 LNE 240
>gi|430809219|ref|ZP_19436334.1| RNA helicase [Cupriavidus sp. HMR-1]
gi|429498363|gb|EKZ96873.1| RNA helicase [Cupriavidus sp. HMR-1]
Length = 498
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 148/259 (57%), Gaps = 10/259 (3%)
Query: 82 EDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGK 141
+ AP E+ +F L +L+A+ Y PTPIQA IPV LLG+D+ G A TGTGK
Sbjct: 8 DQAPAAEQ--TFESFGLDPRVLRALTEQGYTKPTPIQAQAIPVVLLGKDVMGAAQTGTGK 65
Query: 142 TAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALS 196
TA F LPI++RLL + R L+L PTREL QVY + A+ T + +
Sbjct: 66 TAGFALPIIQRLLPLANASASPARHPVRALMLTPTRELADQVYDNVARYAKHTDLRSTVV 125
Query: 197 VGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFAS 256
GG+++ Q LR+ +I++ATPGRLLDH+ S +LS +++LVLDEADRMLD F
Sbjct: 126 FGGVDMNPQTDALRRGVEILVATPGRLLDHVQQK-SVNLSQVQMLVLDEADRMLDMGFLP 184
Query: 257 QMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFS 316
++ II L RQT+LFSAT + + L S L +PV + V ++ N+RQ V +
Sbjct: 185 DLQRIINLLPAQRQTLLFSATFSPEIKKLASSYLKQPVTIEVARSNSTNENVRQ--VVYQ 242
Query: 317 NIDEVRLYNVLGLMLLREN 335
D + V+ L+ R N
Sbjct: 243 VQDGHKQAAVVHLLKQRAN 261
>gi|395334120|gb|EJF66496.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 552
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 137/211 (64%), Gaps = 7/211 (3%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---I 149
F ++NLS P +KA+ + T IQ +IP L G+D+ G A TG+GKT AF++P +
Sbjct: 21 FSELNLSEPTMKALKEMGLETMTTIQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPAVEL 80
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L RL +KPR+ T V+++ PTREL +Q+++V R+L Q+ S + +GG K +E L
Sbjct: 81 LHRLKFKPRN--GTGVIIISPTRELALQIFEVARELMQYHSQTFGIIMGGATRKGEEIKL 138
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII-RLCSRT 268
+K +++IATPGRL+DHL T F +++ LV+DEADR+L+ F QMK+II L +
Sbjct: 139 QKGVNLLIATPGRLIDHLEGTKGFVFRNLKSLVIDEADRILEVGFEEQMKKIIATLPNEG 198
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
RQ+MLFSAT T V DL +SL RP + VD
Sbjct: 199 RQSMLFSATQTSKVTDLARISL-RPGPILVD 228
>gi|54302911|ref|YP_132904.1| ATP-dependent RNA helicase RhlE [Photobacterium profundum SS9]
gi|46916335|emb|CAG23104.1| putative ATP-dependent RNA helicase RhlE [Photobacterium profundum
SS9]
Length = 471
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 142/245 (57%), Gaps = 6/245 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS P+L+A+ Y P+PIQA IP + G+D+ A TGTGKTAAF LP+LE
Sbjct: 8 SFASLGLSAPILEAVTKQGYETPSPIQAQAIPAVIEGKDVMAAAQTGTGKTAAFTLPVLE 67
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R LVL PTREL QV + A+ + A+ GG+++ Q LR
Sbjct: 68 RLSNGPRVKPNQVRALVLTPTRELAAQVAESVALYAKNLPLSSAVVFGGVKINPQMMRLR 127
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ D+++ATPGRLLD L+N + IEVLVLDEADRMLD F +++++ + RQ
Sbjct: 128 QGADVLVATPGRLLD-LYNQRAVRFDQIEVLVLDEADRMLDMGFIRDIRKLLAAMPKQRQ 186
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
+LFSAT +D + L + PV + V + A ++Q +D+ R N+L
Sbjct: 187 NLLFSATFSDEIRQLAKGLVNNPVEISVTPRNATAPTVKQWICP---VDKSRKANLL-TK 242
Query: 331 LLREN 335
LL+EN
Sbjct: 243 LLKEN 247
>gi|323335994|gb|EGA77270.1| Has1p [Saccharomyces cerevisiae Vin13]
gi|365763984|gb|EHN05510.1| Has1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 505
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 149/241 (61%), Gaps = 14/241 (5%)
Query: 84 APPVEENS---SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
AP E+ + F ++ LS+P LKAI + + T +QA TIP L G D+ G A TG+G
Sbjct: 32 APEGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGXDVLGAAKTGSG 91
Query: 141 KTAAFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
KT AF++P +L L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +
Sbjct: 92 KTLAFLIPAIELLHSLKFKPRN--GTGIIVITPTRELALQIFGVARELMEFHSQTFGIVI 149
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG + + L K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +
Sbjct: 150 GGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDE 209
Query: 258 MKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEF 312
M++II+ L + RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +
Sbjct: 210 MRQIIKILPNEDRQSMLFSATQTTKVEDLARISL-RPGPLFINVVPETDNSTADGLEQGY 268
Query: 313 V 313
V
Sbjct: 269 V 269
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 138/235 (58%), Gaps = 10/235 (4%)
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
L + PT IQ IP+ L G+D+ G A TG+GKTAAF LPIL+ LL +P Q L+L
Sbjct: 13 LKWKEPTRIQQEAIPLTLQGKDVIGLAETGSGKTAAFALPILQALLEQP---QRYFALIL 69
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
PTREL Q+ + L V+ + VGG+++ Q +L K P I+IATPGRL+DHL
Sbjct: 70 TPTRELAFQISEQFDALGSSMGVKTVVLVGGMDMHAQGMILEKKPHIIIATPGRLVDHLE 129
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
NT F+L ++ LV+DEADR+L+ F ++ +I+R+ R R+T+LFSATMT V L
Sbjct: 130 NTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKKVQKLQRA 189
Query: 289 SLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVLG---LMLLRENC 336
SL PVRV V ++ L+Q + V F ++ V + N L M+ C
Sbjct: 190 SLRNPVRVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCGTC 244
>gi|359450109|ref|ZP_09239577.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20480]
gi|358044098|dbj|GAA75826.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20480]
Length = 438
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 149/259 (57%), Gaps = 9/259 (3%)
Query: 80 FFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGT 139
+F+ P +SF +NL LL AI NY PT IQ TIP L G D+ G A TGT
Sbjct: 18 YFKAKP--MSATSFSSLNLDPLLLTAIEQNNYTTPTAIQIKTIPPILAGNDVMGSAQTGT 75
Query: 140 GKTAAFMLPILERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
GKTAAF+LP+L +LL P+ D+ RV++L PTREL QV+ + AQ ++V+ AL+
Sbjct: 76 GKTAAFVLPLLHKLLNTPKKDEQGIARVVILTPTRELAQQVFASFEKYAQGSNVQGALAY 135
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG + Q L K +++ATPGRLLDH+ S LS ++ LV DEADRMLD F +
Sbjct: 136 GGASIGPQIKAL-KTAQVIVATPGRLLDHIVKG-SVVLSSVDSLVFDEADRMLDMGFIDE 193
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
+K I+R RQT+LFSAT D+V +L L P + VD + A+ + Q +
Sbjct: 194 IKRILRHIPGDRQTLLFSATFDDSVFELSKKLLKNPELIEVDKRNSAAVEVEQIIYA--- 250
Query: 318 IDEVRLYNVLGLMLLRENC 336
+DE R ++ M+ +N
Sbjct: 251 VDEDRKRELVSHMIGMKNW 269
>gi|84516715|ref|ZP_01004073.1| ATP-dependent RNA helicase RhlE [Loktanella vestfoldensis SKA53]
gi|84509183|gb|EAQ05642.1| ATP-dependent RNA helicase RhlE [Loktanella vestfoldensis SKA53]
Length = 498
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 135/232 (58%), Gaps = 1/232 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+ F MNL +LKA+ Y PTPIQ IP AL GRD+ G A TGTGKTAAF LP++
Sbjct: 2 TKFSDMNLDPKVLKAVAETGYDTPTPIQDGAIPPALEGRDVLGIAQTGTGKTAAFTLPMI 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L + R LVL PTREL QV + A++T + AL +GG K Q+ ++
Sbjct: 62 TLLGRGRARARMPRSLVLAPTRELAAQVAENFDTYAKYTKLTKALLIGGTSFKDQDKLID 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLDHL L+D++++V+DEADRMLD F ++EI + TRQ
Sbjct: 122 KGVDVLIATPGRLLDHLERG-KLILTDVKIMVVDEADRMLDMGFIPDIEEIFKRTPFTRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
T+ FSATM + + + L+ P +V V +N++Q V F ++R
Sbjct: 181 TLFFSATMAPEIERITNTFLSNPAKVEVARAATTNVNIKQGVVMFRASAKLR 232
>gi|429211643|ref|ZP_19202808.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
gi|428156125|gb|EKX02673.1| putative ATP-dependent RNA helicase [Pseudomonas sp. M1]
Length = 443
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLL+A+ L Y PTP+QA IP L GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFAALGLIEPLLRALDGLGYQNPTPVQAQAIPAVLKGRDLLAAAQTGTGKTAGFALPLLQ 61
Query: 152 RLLYK-PRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
+LL + P+ N+ R LVLVPTREL QV+ R Q + A++ GG+ + Q L
Sbjct: 62 KLLQEGPQVAANSVRALVLVPTRELAEQVHDSFRAYGQHVPLRTAVAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK D+++ATPGRLLD L+ + + ++VLVLDEADRMLD FA +++E+ +
Sbjct: 122 RKGVDVLVATPGRLLD-LYRQNALKFTQLQVLVLDEADRMLDLGFARELEEVFAALPKRH 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT ++A+ + L P+ + V + A ++Q+ ++ + L+
Sbjct: 181 QTLLFSATFSEAIRQMAGGLLRDPLSIEVAPRNTAAKTVKQQLITVDKKRKAELF 235
>gi|161524137|ref|YP_001579149.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC 17616]
gi|160341566|gb|ABX14652.1| DEAD/DEAH box helicase domain protein [Burkholderia multivorans
ATCC 17616]
Length = 509
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 146/255 (57%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G + V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 7 GLTRDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQ 62
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 63 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELA 122
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ T + A+ GG+++ Q + LR+ +I+IATPGRLLDH+ + +L
Sbjct: 123 DQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANL 181
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 182 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQT 241
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 242 IEVARSNSTNANVTQ 256
>gi|348532949|ref|XP_003453968.1| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Oreochromis niloticus]
Length = 336
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K + Y PTPIQ T+PV L G+D+ A TG+GKTAAF++
Sbjct: 73 KKSGGFQSMGLSYPVFKGVMKKGYKIPTPIQRKTVPVILDGKDVVAMARTGSGKTAAFLI 132
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+ E+ L P+ R L+L PTREL +Q + T++L +FT ++ AL +GG ++ Q +
Sbjct: 133 PMFEK-LKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTALILGGDRMEDQFA 191
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
L + PDI+I TPGRL+ H+ + L + +V DEADR+ + FA Q++EIIR
Sbjct: 192 ALHENPDIIIGTPGRLM-HVVMEMNLKLHSVAYVVFDEADRLFEMGFAEQLQEIIRRLPD 250
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
TRQT+LFSAT+ + + LT PV + +D + +++ ++ F
Sbjct: 251 TRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSF 295
>gi|198413643|ref|XP_002129533.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 2 [Ciona intestinalis]
Length = 401
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 136/229 (59%), Gaps = 3/229 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L + L + P+ IQ IPVAL G D+ G A TG+GKT AF +P+L+
Sbjct: 21 TFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLAETGSGKTGAFCIPVLQ 80
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + + L ++ + VGG+++ Q+ +L K
Sbjct: 81 ALLENP---QRLFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVGGVDMMGQQIILAK 137
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +V+ATPGRL+DHL T F+L I+ LVLDEADR+L+ F S++ I+++ R R+T
Sbjct: 138 KPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESELDTILKVIPRERRT 197
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
LFSATMT V L +LT+PV+ V+N + L Q ++ + D+
Sbjct: 198 FLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQYYLFLPSKDK 246
>gi|406939141|gb|EKD72227.1| hypothetical protein ACD_45C00735G0003 [uncultured bacterium]
Length = 427
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 4/212 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q NLS P+ KA+ A Y PTPIQA +IP LLG+DI A TGTGKTA+F+LP L
Sbjct: 2 TFAQFNLSPPIAKALDACGYKKPTPIQAKSIPEILLGKDIVASAQTGTGKTASFVLPALH 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
R L + R+L+L PTREL Q+ + +F V +A VGG+ + Q L
Sbjct: 62 R-LSTSKATSKPRILILTPTRELANQITTAIGKYGKFLRVNIASLVGGMPYRQQLRALSH 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGRLLDH+ + LS IE+L+LDEADRMLD F ++EI + RQT
Sbjct: 121 SVDMIIATPGRLLDHMSHR-RLDLSAIEMLILDEADRMLDMGFIDDVREIAKATPSNRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
+LFSAT+ + ++ ++ L P++ +D +HE
Sbjct: 180 LLFSATVDNRLSQVIRQLLNNPIK--IDFSHE 209
>gi|121708606|ref|XP_001272186.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143019610|sp|A1CIQ5.1|HAS1_ASPCL RecName: Full=ATP-dependent RNA helicase has1
gi|119400334|gb|EAW10760.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 625
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 137/218 (62%), Gaps = 7/218 (3%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E F ++ LS LKAI + + T IQ TIP L GRD+ G A TG+GKT +F++P
Sbjct: 141 EPQKFTELGLSEKTLKAINEMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIP 200
Query: 149 ---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
+L L +KPR+ T VLV+ PTREL +Q++ V R+L Q S + +GG + +
Sbjct: 201 AVEMLSALRFKPRN--GTGVLVVSPTRELALQIFGVARELCQHHSQTYGIVIGGANRRAE 258
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-L 264
L K +++IATPGRLLDHL NT F +++ LV+DEADR+L+ F +M++I++ L
Sbjct: 259 AEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKIL 318
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
S RQTMLFSAT T V DL +SL RP ++++ +H
Sbjct: 319 PSEERQTMLFSATQTTKVEDLARISL-RPGPLYINVDH 355
>gi|365984861|ref|XP_003669263.1| hypothetical protein NDAI_0C03600 [Naumovozyma dairenensis CBS 421]
gi|343768031|emb|CCD24020.1| hypothetical protein NDAI_0C03600 [Naumovozyma dairenensis CBS 421]
Length = 519
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 147/230 (63%), Gaps = 9/230 (3%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F+ ++LS +KAI + + TP+QA TIP + GRD+ G A TG+GKT AF++P +
Sbjct: 51 TNFNDLSLSSQTMKAIEKMGFESLTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAI 110
Query: 151 ERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
E L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +GG + +
Sbjct: 111 ELLYSLKFKPRN--GTGIIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAE 168
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCS 266
L K +I+IATPGRLLDHL NT F +++ L++DEADR+L+ F +MK+IIR L +
Sbjct: 169 KLMKGVNILIATPGRLLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIRILPN 228
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTR-PVRVFVDNNHEVAL--NLRQEFV 313
RQ+MLFSAT T V DL +SL + P+ + V++ + + L Q +V
Sbjct: 229 EDRQSMLFSATQTTKVEDLARISLRKGPLFINVESEKDTSTADGLEQGYV 278
>gi|241205862|ref|YP_002976958.1| DEAD/DEAH box helicase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859752|gb|ACS57419.1| DEAD/DEAH box helicase domain protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 580
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 145/231 (62%), Gaps = 5/231 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F + +S+P++ + L PTPIQ +IP+ L GRD+ G A TGTGKTAAF LP++
Sbjct: 23 TNFESLGVSKPIIATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLPLI 82
Query: 151 ERLLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
E+LL R D++ TR L+L PTREL Q+ + ++ + +S+ + + VGG+ + Q+
Sbjct: 83 EKLLADERRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQLQ 142
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K DI++ATPGRLLD L N + +L+ + LVLDEAD+MLD F +++I ++ +
Sbjct: 143 LEKGTDILVATPGRLLD-LINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVPKK 201
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVSFSN 317
RQTMLFSATM A+ DL L PV+V V + A + Q FV+ N
Sbjct: 202 RQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKN 252
>gi|153832249|ref|ZP_01984916.1| putative ATP-dependent RNA helicase RhlE [Vibrio harveyi HY01]
gi|148871560|gb|EDL70415.1| putative ATP-dependent RNA helicase RhlE [Vibrio harveyi HY01]
Length = 499
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R LVL PTREL QV + ++ + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRSNQVRALVLTPTRELAAQVQENVFMYSRHLPLTSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRLLD L+N + +E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLLD-LYNQNAVKFDQLEMLVLDEADRMLDMGFIRDIRKILDLLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+LFSAT +D + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSDEIRDLAKGLVNNPVEISVNPANSTARTVEQ 220
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 136/222 (61%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++NL LL++I ++ + PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL+
Sbjct: 124 TFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQ 183
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + Q LVL PTREL Q+ L + + VGG+++ Q L +
Sbjct: 184 SLWHA---QQPYFALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMR 240
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGR++DHL +T FSL +++ LV+DEADR+LD F + +I+++ R T
Sbjct: 241 KPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKRTT 300
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT+ + L SL PVRV V + ++ A NL Q +
Sbjct: 301 YLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMM 342
>gi|336365891|gb|EGN94240.1| hypothetical protein SERLA73DRAFT_163228 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378572|gb|EGO19730.1| hypothetical protein SERLADRAFT_364022 [Serpula lacrymans var.
lacrymans S7.9]
Length = 561
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 140/224 (62%), Gaps = 7/224 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
P V+ F ++LS P KA+ + + TP+QA +IP L G+D+ G A TG+GKT
Sbjct: 15 GPSVKGREPFSNLDLSEPTNKALEDMGFSTMTPVQAKSIPPLLAGKDVLGAARTGSGKTL 74
Query: 144 AFMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGL 200
AF+LP +L RL +KPR+ T ++++ PTREL +Q++ V + L S + +GG
Sbjct: 75 AFLLPAVELLHRLKFKPRN--GTGIIIVSPTRELALQIFGVAKDLMAHHSQTFGIVIGGA 132
Query: 201 EVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKE 260
++ + L K ++++ATPGRLLDHL NTP F +++ LV+DEADR+L+ F +MK+
Sbjct: 133 NIRAEREKLVKGVNLLVATPGRLLDHLQNTPGFVFRNLKALVIDEADRILEIGFEEEMKK 192
Query: 261 IIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
I+ L + RQ+MLFSAT T V DL +SL RP + +D + E
Sbjct: 193 IMTILPNDNRQSMLFSATQTTKVQDLARISL-RPGPLHIDVDKE 235
>gi|444318027|ref|XP_004179671.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
gi|387512712|emb|CCH60152.1| hypothetical protein TBLA_0C03500 [Tetrapisispora blattae CBS 6284]
Length = 506
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF ++ L L++A LNY PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL
Sbjct: 86 SSFSELKLVPELVEACKNLNYEKPTPIQSRAIPPALEGKDIIGLAQTGSGKTAAFAIPIL 145
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+L D Q ++ PTREL Q+ + L V VGG+ + Q L
Sbjct: 146 NKLW---EDQQPYYACIMAPTRELAQQIKEQFDSLGALMGVRSVCIVGGMNMMDQARDLM 202
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTR 269
+ P I+IATPGRL+DHL NT FSL ++ LV+DEADR+LD F + I++ L ++ R
Sbjct: 203 RKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDLEFGPVLDRILKILPTQGR 262
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V N ++ L Q +
Sbjct: 263 TTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLIQTLM 306
>gi|145348205|ref|XP_001418546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578775|gb|ABO96839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 546
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 147/245 (60%), Gaps = 5/245 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ F M++ + +A+ Y PTPIQ IP AL GRD+ A TG+GKTAAF++P+
Sbjct: 84 SGGFESMDILPDVFRAVKRKGYRVPTPIQRKAIPPALEGRDVVAMARTGSGKTAAFLIPV 143
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L +L R ++L PTREL +Q ++ ++LA+FT + VA VGG ++ Q + L
Sbjct: 144 LSKLRTHSLK-AGARCVILAPTRELALQTFKFAKELAKFTDLRVAALVGGDSMEAQFADL 202
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
PD+++ATPGRLL H+ +F+L + +VLDEADR+L+ FA Q+K+I+ + R
Sbjct: 203 SNNPDVIVATPGRLLHHIDEVKAFTLRTVCHVVLDEADRLLEMGFADQLKQIMNSVADVR 262
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGL 329
QT+LFSAT+ A+ + V V L P V +D +++ +LR FV + ++V L
Sbjct: 263 QTLLFSATLPSALAEFVRVGLREPEVVRLDAEMKISSDLRMSFVLMRSDEKVAAL----L 318
Query: 330 MLLRE 334
+LRE
Sbjct: 319 YMLRE 323
>gi|186476836|ref|YP_001858306.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phymatum STM815]
gi|184193295|gb|ACC71260.1| DEAD/DEAH box helicase domain protein [Burkholderia phymatum
STM815]
Length = 482
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 136/235 (57%), Gaps = 6/235 (2%)
Query: 81 FEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTG 140
D N++F Q L +LKAI Y PTPIQA IPV L GRD+ G A TGTG
Sbjct: 1 MSDTATTPTNATFDQFGLHADILKAIAEQGYTTPTPIQAKAIPVVLGGRDVMGAAQTGTG 60
Query: 141 KTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
KTA+F LPI++RLL + R L+L PTREL QV + A+ T++ A+
Sbjct: 61 KTASFSLPIIQRLLPLANTSASPARHPVRALILTPTRELADQVAANVQSYAKHTALRSAV 120
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
GG+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F
Sbjct: 121 VFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQK-TANLGQVQMLVLDEADRMLDMGFL 179
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ I+ L RQT+LFSAT + + L S L P + V ++ A N+ Q
Sbjct: 180 PDLQRILNLLPTERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQ 234
>gi|407712738|ref|YP_006833303.1| DEAD/DEAH box helicase [Burkholderia phenoliruptrix BR3459a]
gi|407234922|gb|AFT85121.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 512
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 137/239 (57%), Gaps = 6/239 (2%)
Query: 77 GKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
K D ++F Q L+ +LKA+ Y PTPIQA IPV L GRD+ G A
Sbjct: 23 AKATMSDTAVTPSTATFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQ 82
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
TGTGKTA+F LPI++RLL + R L+L PTREL QV + A+ T++
Sbjct: 83 TGTGKTASFSLPIIQRLLPHASTSASPARHPVRALILTPTRELADQVAANVQSYAKHTAL 142
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
A+ GG+++ Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD
Sbjct: 143 RSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLD 201
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
F ++ I+ L + RQT+LFSAT + + L + L P + V ++ A N+ Q
Sbjct: 202 MGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQ 260
>gi|333916134|ref|YP_004489866.1| DEAD/DEAH box helicase domain-containing protein [Delftia sp.
Cs1-4]
gi|333746334|gb|AEF91511.1| DEAD/DEAH box helicase domain protein [Delftia sp. Cs1-4]
Length = 504
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 140/236 (59%), Gaps = 6/236 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF + L+ L +A+ + Y TPIQA IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+RL+ + R LVL+PTREL QV Q Q A++T + + GG+++K
Sbjct: 62 LQRLMRHENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTLELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSH 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
+TR T+LFSAT + + L S L PV + V +E A + Q F S S+ D+
Sbjct: 181 LPKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARPNETASTVEQRFYSVSDDDK 236
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 135/224 (60%), Gaps = 7/224 (3%)
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
L + PT IQ IP+ L G+D+ G A TG+GKTAAF LPIL+ LL P Q L+L
Sbjct: 20 LKWNEPTKIQREAIPLVLEGKDVIGLAETGSGKTAAFALPILQALLENP---QRYFALIL 76
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
PTREL Q+ + L V+ A+ VGG+++ Q +L K P I+IATPGRL+DHL
Sbjct: 77 TPTRELAFQISEQFEALGSSIGVKCAVIVGGMDMHAQGLLLEKKPHIIIATPGRLVDHLE 136
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
NT F+L I+ L++DEADR+L+ F ++ +I+R+ R R+T+LFSATMT V L
Sbjct: 137 NTKGFNLRQIKFLIMDEADRILNMDFEVEVNKILRVMPRERRTLLFSATMTKKVQKLQRA 196
Query: 289 SLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYNVLG 328
SL PV+V V ++ L+Q + V F ++ V + N L
Sbjct: 197 SLRNPVKVEVSTKYQTVEKLQQYYIFIPVKFKDVYLVHILNELA 240
>gi|157115632|ref|XP_001658272.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108876828|gb|EAT41053.1| AAEL007274-PA [Aedes aegypti]
Length = 442
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 3/231 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
+A E+ +S+ M L L +A AL + P+ IQ IP+AL G+D+ G A TG+GKT
Sbjct: 49 NADSEEKQASWEDMGLIDTLCEACRALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKT 108
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AF LPIL+ LL P Q ++L PTREL Q+ + L ++ + VGG+++
Sbjct: 109 GAFALPILQALLENP---QRYFAVILTPTRELAYQISEQFEALGASIGIKCCVIVGGMDM 165
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L + P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++++I+
Sbjct: 166 VSQALHLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELEKIL 225
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ R R+T LFSATMT V L SL PV+V V + ++ L Q ++
Sbjct: 226 KVIPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQTVEKLLQYYI 276
>gi|160897598|ref|YP_001563180.1| DEAD/DEAH box helicase [Delftia acidovorans SPH-1]
gi|160363182|gb|ABX34795.1| DEAD/DEAH box helicase domain protein [Delftia acidovorans SPH-1]
Length = 504
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 140/236 (59%), Gaps = 6/236 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF + L+ L +A+ + Y TPIQA IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+RL+ + R LVL+PTREL QV Q Q A++T + + GG+++K
Sbjct: 62 LQRLMRHENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTLELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSH 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
+TR T+LFSAT + + L S L PV + V +E A + Q F S S+ D+
Sbjct: 181 LPKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARPNETASTVEQRFYSVSDDDK 236
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 142/238 (59%), Gaps = 7/238 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L + +L + PT IQ IP+ L GRD+ G A TG+GKT AF LPIL+
Sbjct: 23 TFKDLGIVDVLCQTCESLKWKAPTKIQKEAIPLTLQGRDVIGLAETGSGKTGAFALPILQ 82
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q L+L PTREL Q+ + + L V+ A+ VGG+++ Q +L K
Sbjct: 83 ALLQNP---QRYFALILTPTRELAFQISEQFQALGSKIGVKTAVIVGGMDMMSQALLLAK 139
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P ++IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++ +I+++ R R+T
Sbjct: 140 KPHVIIATPGRLVDHLENTKGFNLKALKFLVMDEADRILNMDFEVEVDKILKVIPRERRT 199
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF----VSFSNIDEVRLYN 325
+LFSATMT V L SL PV+V V + ++ L+Q + V F ++ V + N
Sbjct: 200 LLFSATMTQKVQKLQRASLHDPVKVEVSSKYQTVDKLQQYYLFIPVKFKDVYLVSIIN 257
>gi|395804393|ref|ZP_10483633.1| DEAD/DEAH box helicase [Flavobacterium sp. F52]
gi|395433492|gb|EJF99445.1| DEAD/DEAH box helicase [Flavobacterium sp. F52]
Length = 415
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 146/246 (59%), Gaps = 7/246 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI--- 149
F ++LS+ + KA+ Y+ PTPIQ +IPV L GRD+ GCA TGTGKTAAF +PI
Sbjct: 3 FEDLSLSKSIQKAVFEEGYLNPTPIQEQSIPVVLSGRDLIGCAQTGTGKTAAFAIPIIHQ 62
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L R++ + + R LV+ PTREL VQ+ + ++T++ GG+ Q L
Sbjct: 63 LHRIVGSSKKAKQIRALVVTPTRELAVQIGESFDTYGKYTNLTQLTIFGGVSQNPQVETL 122
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
+K DI+IATPGRLLD LH L+ + LVLDEAD+MLD F + +K+I++L + R
Sbjct: 123 KKGVDILIATPGRLLD-LHKQGFLDLNHLHTLVLDEADQMLDMGFINDVKKIVKLTPKNR 181
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGL 329
QT+LFSATM A+ +L + L P +V V A N+ Q V F +D+ N+L
Sbjct: 182 QTLLFSATMPIAIRELAEMFLQDPAKVEVSPVSSTAENVEQR-VYF--VDKTEKRNLLYS 238
Query: 330 MLLREN 335
++ EN
Sbjct: 239 LIKEEN 244
>gi|319944884|ref|ZP_08019146.1| ATP-dependent RNA helicase RhlE [Lautropia mirabilis ATCC 51599]
gi|319741454|gb|EFV93879.1| ATP-dependent RNA helicase RhlE [Lautropia mirabilis ATCC 51599]
Length = 489
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++SF + L+ PLL+A+ + Y PTPIQA IPV L GRD+ A TGTGKTA F LPI
Sbjct: 12 DTSFSGLGLADPLLRALADVGYTNPTPIQAKAIPVVLTGRDLLAAAQTGTGKTAGFTLPI 71
Query: 150 LERLLYKP---RDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
L+RLL P R R L+L PTREL QV + + A++T + L GG+ + Q
Sbjct: 72 LQRLLDNPMQTRKPGRPRCLILTPTRELTAQVEESVKAYAKYTRIRSVLIFGGVSINPQI 131
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
LR+ DI++ATPGRLLDH+ + LS +E+ VLDEADRMLD F ++ +I
Sbjct: 132 QALRQPVDILVATPGRLLDHVQQG-TVDLSGVEIFVLDEADRMLDMGFIHDIRRVIAKLP 190
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFV 298
RQ +LFSAT + + L L P V V
Sbjct: 191 AKRQNLLFSATFSPEIRSLAHGLLDNPAEVDV 222
>gi|255576631|ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 590
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 146/247 (59%), Gaps = 8/247 (3%)
Query: 67 EAEEYEENEG--GKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPV 124
E E +NEG G + + + SF + LS P KAI + + Y T IQA IP
Sbjct: 78 EENEVSKNEGQDGDKVRKRGSGIMSTDSFESLGLSEPTRKAIQEMGFQYLTQIQARAIPP 137
Query: 125 ALLGRDICGCAATGTGKTAAFMLPILERLL---YKPRDDQNTRVLVLVPTRELGVQVYQV 181
L+G+D+ G A TG+GKT AF++P +E L + PR+ T V+V+ PTREL +Q + V
Sbjct: 138 LLVGKDVLGAARTGSGKTLAFLIPAVELLYNVHFAPRN--GTGVVVICPTRELAIQTHAV 195
Query: 182 TRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVL 241
+ L ++ S + L +GG K + + K ++++ATPGRLLDHL NT F +++ L
Sbjct: 196 AKDLLKYHSQTLGLVIGGSARKGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCL 255
Query: 242 VLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSL-TRPVRVFVDN 300
++DEADR+L+ +F +MK+II++ ++RQT LFSAT T V DL +S PV + VD+
Sbjct: 256 MIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQTKKVEDLARLSFQITPVYIDVDD 315
Query: 301 NHEVALN 307
N
Sbjct: 316 GRTKVTN 322
>gi|94311518|ref|YP_584728.1| RNA helicase [Cupriavidus metallidurans CH34]
gi|93355370|gb|ABF09459.1| RNA helicase [Cupriavidus metallidurans CH34]
Length = 556
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 10/257 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
AP E+ +F L +L+A+ Y PTPIQA IPV LLG+D+ G A TGTGKTA
Sbjct: 68 APAAEQ--TFESFGLDPRILRALTEQGYTKPTPIQAQAIPVVLLGKDVMGAAQTGTGKTA 125
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
F LPI++RLL + R L+L PTREL QVY + A+ T + + G
Sbjct: 126 GFALPIIQRLLPLANASASPARHPVRALMLTPTRELADQVYDNVARYAKHTDLRSTVVFG 185
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q LR+ +I++ATPGRLLDH+ S +LS +++LVLDEADRMLD F +
Sbjct: 186 GVDMNPQTDALRRGVEILVATPGRLLDHVQQK-SVNLSQVQMLVLDEADRMLDMGFLPDL 244
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
+ II L RQT+LFSAT + + L S L +PV + V ++ N+RQ V +
Sbjct: 245 QRIINLLPAQRQTLLFSATFSPEIKKLASSYLKQPVTIEVARSNSTNENVRQ--VVYQVQ 302
Query: 319 DEVRLYNVLGLMLLREN 335
D + V+ L+ R N
Sbjct: 303 DGHKQAAVVHLLKQRAN 319
>gi|53712950|ref|YP_098942.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60681162|ref|YP_211306.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763047|ref|ZP_06091615.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|383117799|ref|ZP_09938542.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|423249596|ref|ZP_17230612.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|423256091|ref|ZP_17237019.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|423258064|ref|ZP_17238987.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|423264968|ref|ZP_17243971.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|423268460|ref|ZP_17247432.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|423273980|ref|ZP_17252927.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|423285051|ref|ZP_17263934.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
gi|52215815|dbj|BAD48408.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60492596|emb|CAH07368.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251946848|gb|EES87130.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|263255655|gb|EEZ27001.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|387777510|gb|EIK39607.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|392649282|gb|EIY42960.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|392655681|gb|EIY49323.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|392703744|gb|EIY96885.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|392704701|gb|EIY97836.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|392707413|gb|EIZ00532.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|404579640|gb|EKA84354.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
Length = 427
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +NL P+LKA+ Y PTPIQ +IP+ L G+D+ GCA TGTGKTAAF +PIL+
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+ LYK + + LVL PTREL +Q+ + ++T ++ A+ GG+ K Q LR
Sbjct: 62 K-LYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRS 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
I++ATPGRLLD L + SLS ++ VLDEADRMLD F +K I++L RQT
Sbjct: 121 GIQILVATPGRLLD-LISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L + LT+P +V V
Sbjct: 180 LFFSATMPPEIETLANSMLTKPEKVEV 206
>gi|307729080|ref|YP_003906304.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307583615|gb|ADN57013.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 487
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 145/253 (57%), Gaps = 10/253 (3%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++F Q L+ +LKA+ Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 TATFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV + A+ T++ A+ GG+++
Sbjct: 70 IQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QSEQLRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
+ RQT+LFSAT + + L + L P + V ++ A N+ Q + D+
Sbjct: 189 LPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTGAV 248
Query: 325 NVLGLMLLRENCL 337
+ L+RE L
Sbjct: 249 ----VQLIRERSL 257
>gi|401626153|gb|EJS44112.1| has1p [Saccharomyces arboricola H-6]
Length = 505
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 144/229 (62%), Gaps = 11/229 (4%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP---I 149
F ++ LS P LKAI + + T +Q+ TIP L GRD+ G A TG+GKT AF++P +
Sbjct: 44 FEELKLSEPTLKAIEKMGFSTMTSVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L L +KPR+ T ++V+ PTREL +Q++ V R+L +F S + +GG + + L
Sbjct: 104 LHSLKFKPRN--GTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 161
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRT 268
K +++IATPGRLLDHL NT F +++ L++DEADR+L+ F +M++II+ L +
Sbjct: 162 MKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNED 221
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVD----NNHEVALNLRQEFV 313
RQ+MLFSAT T V DL +SL RP +F++ ++ A L Q +V
Sbjct: 222 RQSMLFSATQTTKVEDLARISL-RPGPLFINVVPETDNSTADGLEQGYV 269
>gi|255716462|ref|XP_002554512.1| KLTH0F07106p [Lachancea thermotolerans]
gi|238935895|emb|CAR24075.1| KLTH0F07106p [Lachancea thermotolerans CBS 6340]
Length = 525
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 130/223 (58%), Gaps = 4/223 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++NL L++A L Y PTPIQA IP AL G+DI G A TG+GKTAAF +PIL
Sbjct: 106 SFSELNLVPELIEACENLKYSKPTPIQAEAIPPALEGKDIIGLAQTGSGKTAAFAIPILN 165
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+L + D Q VL PTREL Q+ + L V VGG+ + Q L +
Sbjct: 166 QLWH---DQQPYYACVLAPTRELAQQIKETFDSLGGAMGVRTTCIVGGMNMIDQARDLMR 222
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLC-SRTRQ 270
P I+IATPGRL+DHL NT FS+ ++ LV+DEADR+LD F + I+++ ++ R
Sbjct: 223 KPHIIIATPGRLMDHLENTKGFSMRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQGRT 282
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T LFSATMT ++ L SLT PV+ V ++ L Q +
Sbjct: 283 TYLFSATMTSKIDKLQRASLTNPVKCAVSTKYQTVDTLIQTLM 325
>gi|359440731|ref|ZP_09230644.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20429]
gi|392533197|ref|ZP_10280334.1| ATP-dependent RNA helicase [Pseudoalteromonas arctica A 37-1-2]
gi|358037437|dbj|GAA66893.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. BSi20429]
Length = 415
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 145/248 (58%), Gaps = 7/248 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F +NL LL AI NY PT IQ TIP L G D+ G A TGTGKTAAF+LP+L
Sbjct: 4 TTFSSLNLDPLLLTAIEQNNYTQPTAIQIKTIPPILAGSDVMGSAQTGTGKTAAFVLPLL 63
Query: 151 ERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+LL P+ D+ RV++L PTREL QV+ + AQ T++ AL+ GG+ + Q
Sbjct: 64 HKLLNTPKKDEQGLARVVILTPTRELAQQVFASFEKYAQGTNINGALAYGGVSIGPQIKA 123
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K +++ATPGRLLDH+ S LS ++ LV DEADRMLD F +++ I+R
Sbjct: 124 L-KTAQVIVATPGRLLDHIVKG-SVVLSSVDSLVFDEADRMLDMGFIDEIRRILRHIPGD 181
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLG 328
RQT+LFSAT D+V +L L P + VD + A+ + Q + +DE R ++
Sbjct: 182 RQTLLFSATFDDSVFELSKKLLKNPELIEVDKRNSAAVEVEQVIYA---VDEDRKRELVS 238
Query: 329 LMLLRENC 336
M+ +N
Sbjct: 239 HMIGMKNW 246
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 132/222 (59%), Gaps = 3/222 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L +A AL + PT IQ +PVAL G DI G A TG+GKTA F LPIL+
Sbjct: 20 TFRSLGVCEQLAEACDALGWKAPTQIQVDAVPVALKGHDIIGLAQTGSGKTATFALPILQ 79
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q VL PTREL +Q+ + L ++ A+ VGG+++ Q L K
Sbjct: 80 ALLENP---QPLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGIDMMAQSVALAK 136
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +V+ TPGRL+DHL NT FSL I+ LVLDEADR+L+ F ++ EI+++ + R+T
Sbjct: 137 RPHVVVGTPGRLVDHLTNTKGFSLRTIKYLVLDEADRLLNMDFEQEIDEILKVIPKERRT 196
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT V L L PV+V V + +L+QE++
Sbjct: 197 YLFSATMTTKVAKLQRACLKNPVKVEVSAKYSTVDSLKQEYL 238
>gi|388455396|ref|ZP_10137691.1| ATP-dependent RNA helicase RhlE [Fluoribacter dumoffii Tex-KL]
Length = 461
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 135/233 (57%), Gaps = 8/233 (3%)
Query: 85 PPVEENS------SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATG 138
PP E+ SF + L PLL++I L Y P+PIQ IP+ L G+D+ A TG
Sbjct: 28 PPSTEHQLKGNSMSFSSLGLIPPLLQSIEELGYKDPSPIQTKAIPIVLAGKDVLASAQTG 87
Query: 139 TGKTAAFMLPILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSV 197
TGKTA+F+LP+L L KPR N TRVL+L PTREL QV++ R+ ++ S+ A+
Sbjct: 88 TGKTASFVLPVLHMLSAKPRAKSNRTRVLILTPTRELASQVHESIREYGRYLSLRSAVVF 147
Query: 198 GGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQ 257
GG+++ Q LR ++++ATPGRLLD L + ++ L+LDEADRMLD F
Sbjct: 148 GGVKINPQMMKLRSGVELLVATPGRLLD-LFQQRAIQFDQVDTLILDEADRMLDMGFIHD 206
Query: 258 MKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
++ II + RQ +LFSAT TD + LV L PV + V + ++Q
Sbjct: 207 IRRIINCLPKNRQNLLFSATFTDEIRKLVKTILNEPVAIDVTPRNTTVAKIKQ 259
>gi|375357970|ref|YP_005110742.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|301162651|emb|CBW22198.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
Length = 427
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +NL P+LKA+ Y PTPIQ +IP+ L G+D+ GCA TGTGKTAAF +PIL+
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+ LYK + + LVL PTREL +Q+ + ++T ++ A+ GG+ K Q LR
Sbjct: 62 K-LYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRS 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
I++ATPGRLLD L + SLS ++ VLDEADRMLD F +K I++L RQT
Sbjct: 121 GIQILVATPGRLLD-LISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQT 179
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM + L + LT+P +V V
Sbjct: 180 LFFSATMPPEIETLANSMLTKPEKVEV 206
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 141/238 (59%), Gaps = 7/238 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++NL LL++I ++ + PTPIQ+ IP AL G+DI G A TG+GKTAAF +PIL+
Sbjct: 87 TFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQ 146
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + Q LVL PTREL Q+ L + + VGG+++ Q L +
Sbjct: 147 SLWHA---QQPYFALVLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMR 203
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P I++ATPGR++DHL +T FSL +++ LV+DEADR+LD F + +I+++ R T
Sbjct: 204 KPHIIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKRIT 263
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV----SFSNIDEVRLYN 325
LFSATMT+ + L SL PV+V V + ++ A NL Q + + N + L N
Sbjct: 264 YLFSATMTNKIEKLQRASLHNPVKVSVSSKYQTADNLIQSMMLVNDGYKNTILIHLLN 321
>gi|334366430|ref|ZP_08515362.1| putative ATP-dependent RNA helicase RhlE [Alistipes sp. HGB5]
gi|313157396|gb|EFR56819.1| putative ATP-dependent RNA helicase RhlE [Alistipes sp. HGB5]
Length = 473
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 132/224 (58%), Gaps = 3/224 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++NL P++ A+ Y+ PTPIQ IP AL GRD+ GCA TGTGKTAAF LPIL+
Sbjct: 2 TFKELNLIEPIMHAVAEKGYVTPTPIQEQAIPPALEGRDLMGCAQTGTGKTAAFTLPILQ 61
Query: 152 RLLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L +PR + + LVL PTREL +Q+ + R A++T + + GG+ + Q L
Sbjct: 62 LLSARPRTKGRRPIKALVLTPTRELAIQIDECCRDYARYTDLRHCVIFGGVNQRPQVDAL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ D+++ATPGRLLD L SLSDI VLDEADRMLD F +K I+ L + R
Sbjct: 122 QRGVDLLVATPGRLLD-LIGQGYVSLSDIRFFVLDEADRMLDMGFIHDIKRILPLLPKER 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT+ FSATM + L + L PV V V V + Q +
Sbjct: 181 QTLFFSATMPSDIVTLANSMLHDPVHVTVTPPASVVETISQSVM 224
>gi|402221225|gb|EJU01294.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 813
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 161/272 (59%), Gaps = 15/272 (5%)
Query: 50 GKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEENSS--FHQMNLSRPLLKAIG 107
GKK +K++ + ++ + EE+ KE + + +++ F + LS P +A+
Sbjct: 17 GKKDKKKMVMRAQHRRRQQEEHTL----KELVQAVDSFDPSTAELFAGLPLSLPTQRALR 72
Query: 108 ALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLL---YKPRDDQNTR 164
A +Y PT IQA T+ L GRD+ G A TG+GKT AF+LP+LE L + P+D
Sbjct: 73 AASYTTPTTIQARTLQHTLRGRDVLGAARTGSGKTLAFLLPVLELLWRSKWGPQD--GLG 130
Query: 165 VLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLL 224
L++ PTREL +Q+++V R + Q+ S L +GG V+ ++ L + +I++ATPGRLL
Sbjct: 131 ALIISPTRELAMQIFEVLRSVGQYHSFSAGLVIGGKNVRDEQERLTRM-NILVATPGRLL 189
Query: 225 DHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVND 284
H+ T F+ ++++LVLDEADR+LD F+ + II +TRQT+LFSAT T +V D
Sbjct: 190 QHMDQTAGFATDNLQILVLDEADRILDMGFSHTINAIIANLPKTRQTLLFSATQTQSVKD 249
Query: 285 LVSVSLTRPVRVFV-DNNHEVAL--NLRQEFV 313
L +SL P V V + E+A NL Q ++
Sbjct: 250 LARLSLKDPEFVSVREAGQELATPKNLEQHYL 281
>gi|260948130|ref|XP_002618362.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
gi|238848234|gb|EEQ37698.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
Length = 560
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 145/236 (61%), Gaps = 17/236 (7%)
Query: 68 AEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALL 127
A+E +EN+ G E+N F + S P LKAI + + T +QA TIP L
Sbjct: 83 AQENDENDEG----------EDNYDFEEAGFSEPTLKAIRQMGFKKMTKVQAKTIPPLLA 132
Query: 128 GRDICGCAATGTGKTAAFMLPILERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQ 184
GRD+ G A TG+GKT AF+LP +E L +KPR+ T V+++ PTREL +Q++ V R+
Sbjct: 133 GRDVLGAAKTGSGKTLAFLLPAIELLYSLKFKPRN--GTGVVIISPTRELALQIFGVARE 190
Query: 185 LAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLD 244
L + + + +GG + + L K +++IATPGRLLDHL NT F +++ LV+D
Sbjct: 191 LMEHHTQTFGIVIGGANRRQEADKLVKGVNLLIATPGRLLDHLQNTQGFVFKNLKALVID 250
Query: 245 EADRMLDEHFASQMKEIIR-LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
EADR+L+ F +MK+II+ L + RQ+MLFSAT T V DL +SL RP ++++
Sbjct: 251 EADRILEIGFEEEMKQIIKILPNEDRQSMLFSATQTTKVEDLARMSL-RPGPLYIN 305
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
++ ++F + + L +A L + P+ IQ IPVAL G+D+ G A TG+GKT AF L
Sbjct: 11 DDKTTFKSLGVVDALCEACKQLGWKTPSKIQREAIPVALQGKDVIGLAETGSGKTGAFAL 70
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
PIL+ LL P Q L+L PTREL Q+ + L V+ A+ VGG+++ Q
Sbjct: 71 PILQALLDNP---QRLFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQAL 127
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+L K P I+IATPGRL+DHL NT FSL ++ LV+DEADR+L+ F ++ +++++ +
Sbjct: 128 MLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKEVDKLLKVIPK 187
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
R+T LFSATMT V L SL PV+V V ++ L+Q ++
Sbjct: 188 ERRTFLFSATMTKKVQKLQRASLQAPVKVEVATKYQTVEKLQQSYL 233
>gi|333909234|ref|YP_004482820.1| DEAD/DEAH box helicase domain-containing protein [Marinomonas
posidonica IVIA-Po-181]
gi|333479240|gb|AEF55901.1| DEAD/DEAH box helicase domain protein [Marinomonas posidonica
IVIA-Po-181]
Length = 457
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LP+LE
Sbjct: 2 SFTKLGLSAPILKAIEEQGYTEPSPIQAQAIPAVLEGQDVMAAAQTGTGKTAGFTLPLLE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+L P N R LVL PTREL QV + + Q ++ + GG+++ Q LR
Sbjct: 62 KLSAGPLAKSNQVRALVLTPTRELAAQVAESVKNYGQHLPLKSTVVFGGVKINPQMMALR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ D++IATPGRLLD L+N + +EVL+LDEADRMLD F +K+++ + + RQ
Sbjct: 122 RGADVLIATPGRLLD-LYNQNALKFDQLEVLILDEADRMLDMGFIHDIKKVLAILPKKRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+LFSAT + + DL + PV + V + A ++ Q
Sbjct: 181 NLLFSATFSPEIRDLAKGLVNNPVEISVTPRNATAKSVEQ 220
>gi|307721464|ref|YP_003892604.1| DEAD/DEAH box helicase [Sulfurimonas autotrophica DSM 16294]
gi|306979557|gb|ADN09592.1| DEAD/DEAH box helicase domain protein [Sulfurimonas autotrophica
DSM 16294]
Length = 423
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ + +PLL AI L Y PT +Q IP+ L +D+ A TGTGKTAAF LPIL+
Sbjct: 2 SFEKLGIFKPLLDAINDLGYKEPTLVQTRAIPLVLGKKDVFATAQTGTGKTAAFALPILQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
++ K + + R ++L PTREL +Q+Y+ +++ ++ + VGG +++ Q L+K
Sbjct: 62 KM-RKHVESKGVRAIILSPTRELSIQIYEDITAYSKYMDIKTTILVGGKDLQKQREALKK 120
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
+IVIATPGRLL+H+ N SL D+EV VLDEADRMLD F +++I L + QT
Sbjct: 121 GTEIVIATPGRLLEHIEN--GLSLKDVEVFVLDEADRMLDMGFTKDIRKIHPLLPKRHQT 178
Query: 272 MLFSATMTDAVNDLVSVSLTRP 293
+LFSAT +D V L + LT+P
Sbjct: 179 LLFSATFSDKVRKLSKLILTKP 200
>gi|445499097|ref|ZP_21465952.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444789092|gb|ELX10640.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 550
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 133/223 (59%), Gaps = 6/223 (2%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F LS +L+A+ Y++PTPIQA IPV L GRD+ G A TGTGKTA F LPI++
Sbjct: 67 FADFGLSPHILRALTDQGYVHPTPIQAQAIPVLLQGRDVMGAAQTGTGKTAGFALPIIQM 126
Query: 153 LLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
LL + R L+L PTREL VQV + + AQ T + + GG+++K Q
Sbjct: 127 LLAHASTSTSPARHPVRALILTPTRELAVQVAENVKAYAQHTPLRSTVVFGGMDMKGQTV 186
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+L+ +IVIATPGRLLDH+ + SL +++LV+DEADRMLD F ++ II L
Sbjct: 187 ILKAGVEIVIATPGRLLDHVEQK-NISLGQVQMLVMDEADRMLDMGFLPDLQRIINLLPA 245
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
RQ ++FSAT + + L + LT PV + V +++ A + Q
Sbjct: 246 KRQNLMFSATFSPEIKKLANTFLTNPVTIEVARSNQTADKVTQ 288
>gi|323525320|ref|YP_004227473.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323382322|gb|ADX54413.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1001]
Length = 486
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++F Q L+ +LKA+ Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 TATFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + R L+L PTREL QV + A+ T++ A+ GG+++
Sbjct: 70 IQRLLPHASTSASPARHPVRALILTPTRELADQVAANVQSYAKHTALRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QSDQLRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L + L P + V ++ A N+ Q
Sbjct: 189 LPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQ 234
>gi|149917594|ref|ZP_01906091.1| putative ATP-dependent RNA helicase RhlE [Plesiocystis pacifica
SIR-1]
gi|149821657|gb|EDM81055.1| putative ATP-dependent RNA helicase RhlE [Plesiocystis pacifica
SIR-1]
Length = 437
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 133/227 (58%), Gaps = 2/227 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + L++PLL+A+ Y PTPIQ IP A+ GRDI GCA TGTGKTAAF LPIL+
Sbjct: 2 SFETLGLAKPLLRAVREAGYETPTPIQTQAIPSAIAGRDILGCAQTGTGKTAAFSLPILQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL P D+ R L++ PTREL Q+ A+ + + GG++ K Q + LR+
Sbjct: 62 RLDADPPDEPRIRALIVSPTRELAAQIGANIGSYAKHLELWHTVIFGGVKDKPQIAELRR 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D+++ATPGRLLD L L +EV VLDEAD+MLD F ++ I++ RQT
Sbjct: 122 GVDVLVATPGRLLD-LMGRGHIDLKRVEVFVLDEADQMLDMGFLPDIRRIVKALPSKRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA-LNLRQEFVSFSN 317
+ FSATM A+ +L + L PV V V E A ++ R FV N
Sbjct: 181 LFFSATMPSAIKELAATLLDDPVEVAVARVSEPADVDQRLYFVDKGN 227
>gi|412992605|emb|CCO18585.1| predicted protein [Bathycoccus prasinos]
Length = 594
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 137/222 (61%), Gaps = 5/222 (2%)
Query: 87 VEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFM 146
+ +++F ++LS P ++ I L + T +QA IP L GRD+ G A TG+GKT AF+
Sbjct: 95 ILSSATFASLDLSNPTMQGIKELGHEKMTEVQARCIPPLLAGRDVLGAARTGSGKTLAFL 154
Query: 147 LPILERLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVK 203
+P E L + PR+ V+VL PTREL +Q+Y V +QL Q S L +GG +
Sbjct: 155 IPCCELLYHAKFMPRN--GCGVMVLSPTRELAMQIYSVAQQLMQKHSQTHGLLMGGANRR 212
Query: 204 VQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR 263
+ L K ++++ATPGRLLDH+ NT F S ++V V+DEADRMLD F +M+ I++
Sbjct: 213 AEGEKLIKGVNLLVATPGRLLDHMQNTRGFQYSSLKVFVMDEADRMLDIGFEEEMRTIVK 272
Query: 264 LCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVA 305
+ + RQ+MLFSAT T V DL +SL P+ + VD++ V+
Sbjct: 273 MLPKDRQSMLFSATQTTKVEDLARLSLKTPLYIGVDDSRAVS 314
>gi|390945687|ref|YP_006409447.1| DNA/RNA helicase [Alistipes finegoldii DSM 17242]
gi|390422256|gb|AFL76762.1| DNA/RNA helicase, superfamily II [Alistipes finegoldii DSM 17242]
Length = 473
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 132/224 (58%), Gaps = 3/224 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++NL P++ A+ Y+ PTPIQ IP AL GRD+ GCA TGTGKTAAF LPIL+
Sbjct: 2 TFKELNLIEPIMHAVAEKGYVTPTPIQEQAIPPALEGRDLMGCAQTGTGKTAAFTLPILQ 61
Query: 152 RLLYKPRDD--QNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
L +PR + + LVL PTREL +Q+ + R A++T + + GG+ + Q L
Sbjct: 62 LLSARPRTKGRRPIKALVLTPTRELAIQIDECCRDYARYTDLRHCVIFGGVNQRPQVDAL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ D+++ATPGRLLD L SLSDI VLDEADRMLD F +K I+ L + R
Sbjct: 122 QRGIDLLVATPGRLLD-LIGQGYVSLSDIRFFVLDEADRMLDMGFIHDIKRILPLLPKER 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT+ FSATM + L + L PV V V V + Q +
Sbjct: 181 QTLFFSATMPSDIVTLANSMLHDPVHVTVTPPASVVETISQSVM 224
>gi|226229150|ref|YP_002763256.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
gi|226092341|dbj|BAH40786.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
Length = 498
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 129/227 (56%), Gaps = 4/227 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L L + + L + PTPIQ IP AL GRD+ CA TG+GKT AF+LPIL
Sbjct: 4 TFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLPILH 63
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
+L+ KPR NTR LVL PTREL Q+ + + + T + A GG+ + QE R
Sbjct: 64 QLMSKPRG--NTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQEHAFRS 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSRTRQ 270
D+++ATPGRLLDH P L +E LVLDEADRMLD F ++K+I+R L +R RQ
Sbjct: 122 GVDVIVATPGRLLDHFRQ-PYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLPNRKRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
T+ FSATM + L L +PV + + A + Q S
Sbjct: 181 TLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQ 227
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 137/239 (57%), Gaps = 6/239 (2%)
Query: 77 GKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAA 136
K D +F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A
Sbjct: 19 AKATMSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVLAGRDVMGAAQ 78
Query: 137 TGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSV 191
TGTGKTA+F LPI++RLL + + R L+L PTREL QV + A+ T++
Sbjct: 79 TGTGKTASFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAKHTAL 138
Query: 192 EVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLD 251
A+ GG+++ Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD
Sbjct: 139 RSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHVQQK-TANLGQVQMLVLDEADRMLD 197
Query: 252 EHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
F ++ I+ L + RQT+LFSAT + + L + L P + V ++ A N+ Q
Sbjct: 198 MGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQ 256
>gi|116253340|ref|YP_769178.1| DEAD/DEAH box helicase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257988|emb|CAK09086.1| putative DEAD box ATP-dependent RNA helicase protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 576
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F + +S+P++ + L PTPIQ +IP+ L GRD+ G A TGTGKTAAF LP++
Sbjct: 17 TNFESLGVSKPIVATLFQLGIETPTPIQEHSIPLLLEGRDLIGLAQTGTGKTAAFGLPLI 76
Query: 151 ERLLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
E+LL R D++ TR L+L PTREL Q+ + ++ + +S+ + + VGG+ + Q+
Sbjct: 77 EKLLADERRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQLQ 136
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K DI++ATPGRLLD L N + +L+ + LVLDEAD+MLD F +++I ++ +
Sbjct: 137 LEKGTDILVATPGRLLD-LINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVPKK 195
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVSFSN 317
RQTMLFSATM A+ DL L PV+V V + A + Q FV N
Sbjct: 196 RQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVGGKN 246
>gi|68468064|ref|XP_721871.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
gi|74656630|sp|Q5AK59.1|HAS1_CANAL RecName: Full=ATP-dependent RNA helicase HAS1
gi|46443813|gb|EAL03092.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
Length = 565
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 139/212 (65%), Gaps = 10/212 (4%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + S P +KAI + + T +QA TIP L GRD+ G A TG+GKT AF++P +E
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE- 168
Query: 153 LLY----KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
LLY KPR+ T V+++ PTREL +Q++ V R+L QF S + +GG + + + +
Sbjct: 169 LLYSLKIKPRN--GTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATK 226
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSR 267
L K ++++ATPGRLLDHL NT F S+++ LV+DEADR+L+ F +MK+II+ L +
Sbjct: 227 LAKGVNLLVATPGRLLDHLKNT-QFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNE 285
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
RQ+MLFSAT T V DL +SL RP ++++
Sbjct: 286 NRQSMLFSATQTTKVEDLARISL-RPGPLYIN 316
>gi|163758551|ref|ZP_02165638.1| DEAD/DEAH box helicase-like protein [Hoeflea phototrophica DFL-43]
gi|162283841|gb|EDQ34125.1| DEAD/DEAH box helicase-like protein [Hoeflea phototrophica DFL-43]
Length = 508
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 128/207 (61%), Gaps = 2/207 (0%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F Q+ LS+ LL + L+ PTPIQ IP L GRD+ G A TGTGKTAAF LPIL R
Sbjct: 12 FSQLGLSKALLDTLDQLHLTTPTPIQTQAIPPVLEGRDVIGLAQTGTGKTAAFTLPILHR 71
Query: 153 LL-YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L KP + RVL+L PTREL Q+ + + L + S+ A+ VGG+ ++ Q L
Sbjct: 72 LAPGKPAGPKKARVLILSPTRELSAQIAKTVKDLGRKLSLRSAVVVGGVSIRPQIKTLAS 131
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGRL+D + + SL++IEV+VLDEAD+MLD F +K I+ + TRQT
Sbjct: 132 GVDVLIATPGRLMDLIEQR-AVSLNEIEVVVLDEADQMLDIGFMPAIKRILAMTPATRQT 190
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+LFSATM + L LT P+ V V
Sbjct: 191 LLFSATMPKEIRQLSDRHLTDPIEVSV 217
>gi|374292881|ref|YP_005039916.1| ATP-dependent RNA helicase [Azospirillum lipoferum 4B]
gi|357424820|emb|CBS87699.1| ATP-dependent RNA helicase [Azospirillum lipoferum 4B]
Length = 456
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 137/232 (59%), Gaps = 3/232 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F ++ L +LKA+ A Y PTP+Q A IP AL GRDI A TGTGKTAAFMLP L
Sbjct: 2 TFSELGLHPLVLKALEAFEYTTPTPVQLAAIPPALQGRDILATAETGTGKTAAFMLPTLT 61
Query: 152 RLLYKPRDDQNT-RVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
R P + T RVLVL PTREL QV R+ A+F + + VGG+ + Q +L
Sbjct: 62 RTAELPLNGAATPRVLVLAPTRELAKQVTDAARKYAKFMKLNIVDVVGGMPYREQLRLLS 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ D+++ TPGRLLDH+ +L ++EVL+LDEADRMLD F ++ I + C TRQ
Sbjct: 122 RPVDVLVCTPGRLLDHVARR-RIALDEVEVLILDEADRMLDMGFLDDVETIAKCCPPTRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR 322
T+LF+AT+ + L L P RV V++ A+N+ Q ++D R
Sbjct: 181 TLLFTATLDRRMAQLAGNLLRNPERVAVESQ-ATAINVEQRLHHADDLDHKR 231
>gi|118572555|sp|Q0UR48.1|HAS1_PHANO RecName: Full=ATP-dependent RNA helicase HAS1
Length = 610
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 142/235 (60%), Gaps = 8/235 (3%)
Query: 85 PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
P V++ + F ++NLS ++AI + + T IQ IP L G+D+ G A TG+GKT A
Sbjct: 125 PTVDDPTRFDELNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLA 184
Query: 145 FMLPILERL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
F++P +E L +KPR+ T V+V+ PTREL +Q++ V R+L + S + +GG
Sbjct: 185 FLIPAIEMLSSMRFKPRN--GTGVIVVSPTRELALQIFGVARELMEKHSQTFGIVIGGAN 242
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ + L K +++IATPGRLLDHLHNT F +++ L++DEADR+L+ F +M+ I
Sbjct: 243 RRAEAEKLAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSI 302
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSL-TRPVRVFVD--NNHEVALNLRQEFV 313
I++ RQTMLFSAT T V DL +SL P+ + VD H L Q +V
Sbjct: 303 IKILPTDRQTMLFSATQTTKVEDLARISLKAGPLYINVDYRKEHSTVEGLEQGYV 357
>gi|90414421|ref|ZP_01222398.1| putative ATP-dependent RNA helicase RhlE [Photobacterium profundum
3TCK]
gi|90324534|gb|EAS41090.1| putative ATP-dependent RNA helicase RhlE [Photobacterium profundum
3TCK]
Length = 464
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 142/245 (57%), Gaps = 6/245 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS P+L+A+ Y P+PIQA IP + G+D+ A TGTGKTA F LP+LE
Sbjct: 2 SFASLGLSAPILEAVAKQGYETPSPIQAQAIPAVIEGKDVMAAAQTGTGKTAGFTLPVLE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R LVL PTREL QV + A+ + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVKPNQVRALVLTPTRELAAQVAESVALYAKNLPLSSAVVFGGVKINPQMMRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ D+++ATPGRLLD L+N + +EVLVLDEADRMLD F +++++ + + RQ
Sbjct: 122 QGADVLVATPGRLLD-LYNQRAVRFDQLEVLVLDEADRMLDMGFIRDIRKLLAVMPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
+LFSAT +D + L + PV + V + A ++Q +D+ R N+L
Sbjct: 181 NLLFSATFSDEIRQLAKGLVNNPVEISVTPRNATAPTVKQWICP---VDKSRKANLL-TK 236
Query: 331 LLREN 335
LL+EN
Sbjct: 237 LLKEN 241
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 127/207 (61%), Gaps = 1/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +N++ P+LKAI Y PTPIQ IP AL G+DI GCA TGTGKTAAF +PI++
Sbjct: 2 TFKDLNITEPILKAIEEKGYTSPTPIQVKAIPAALTGKDILGCAQTGTGKTAAFAIPIIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L D++ + L+L PTREL +Q+ + A++T V + GG+ + Q ++L K
Sbjct: 62 HLQAGKERDKSIKALILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRAQVNMLHK 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI++ATPGRLLD L N L + VLDEADRMLD F +K ++ + +QT
Sbjct: 122 GVDILVATPGRLLD-LMNQGYIRLDSVRHFVLDEADRMLDMGFIHDIKRLLPKLPKEKQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM D + L + L +PV++ +
Sbjct: 181 LFFSATMPDTIIALTNSLLKQPVKIAI 207
>gi|356513888|ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 572
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 140/228 (61%), Gaps = 8/228 (3%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + LS P KAI + + + T IQA IP L+G+D+ G A TG+GKT AF++P LE
Sbjct: 88 SFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPALE 147
Query: 152 RLL---YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
L + PR+ V+V+ PTREL +Q + V ++L ++ S + L +GG K++
Sbjct: 148 LLYNVKFTPRNGAG--VIVICPTRELAIQTHAVAKELLKYHSQTLGLVIGGSARKIEAER 205
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K ++++ TPGRLLDHL NT F +++ L++DEADR+L+ +F +MK+II++ +
Sbjct: 206 LAKGINLLVGTPGRLLDHLQNTKGFMYKNLKCLMIDEADRILEANFEEEMKQIIKILPKN 265
Query: 269 RQTMLFSATMTDAVNDLVSVSL-TRPVRVFVDNNHEVALN--LRQEFV 313
RQT LFSAT T V DL +S T P+ + VD+ N L Q +V
Sbjct: 266 RQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRTKVTNEGLLQGYV 313
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 144/238 (60%), Gaps = 9/238 (3%)
Query: 82 EDAPP---VEENS---SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
+DA P VEE + +F Q+ ++ L +A LN+ PT +Q A +P A RDI G A
Sbjct: 9 DDAVPTQSVEEQNDDITFQQLGVTDVLCEACDRLNWKKPTKVQIAALPHAFKKRDIIGLA 68
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TG+GKTAAF +PIL+ LL P Q LVL PTREL Q+ + L + +A+
Sbjct: 69 ETGSGKTAAFAIPILQALLETP---QKLFALVLTPTRELAFQIGEQFEALGASIGILIAV 125
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGG++ Q L K P +++ATPGRL+DHL NT F+L ++ LV+DEADR+L+ F
Sbjct: 126 IVGGVDTVTQSLALAKRPHVIVATPGRLVDHLENTKGFNLRALKYLVMDEADRILNMDFE 185
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++++I+++ + R+T L+SATMT V L SL PVR+ V + ++ L+Q ++
Sbjct: 186 VEVEKILKVIPKERRTYLYSATMTKKVAKLERASLNDPVRIEVSSKYQTVDKLKQYYI 243
>gi|344234177|gb|EGV66047.1| hypothetical protein CANTEDRAFT_129471 [Candida tenuis ATCC 10573]
gi|344234178|gb|EGV66048.1| ATP-dependent rRNA helicase RRP3 [Candida tenuis ATCC 10573]
Length = 485
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 137/226 (60%), Gaps = 3/226 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + +L +L++I A+ + PTPIQA +IP AL G+DI G A TG+GKTAAF +PIL+
Sbjct: 74 SFAEFDLIPEILESIQAMKFTKPTPIQAESIPHALAGKDIIGLAQTGSGKTAAFAIPILQ 133
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L + + LVL PTREL Q+ + L + VGG+++ Q L +
Sbjct: 134 ALWHAKTPYFS---LVLAPTRELAFQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMR 190
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +++ATPGR+ DHL +T FSL +++ LV+DEADR+LD F + +I+++ R +
Sbjct: 191 KPHVIVATPGRITDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPVERTS 250
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
LFSATMT+ + L SL PVRV V N ++ A NL Q + S+
Sbjct: 251 YLFSATMTNKIAKLQRASLKNPVRVAVSNKYQTADNLVQSMMLVSD 296
>gi|68467745|ref|XP_722031.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
gi|46443978|gb|EAL03256.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
Length = 569
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 139/212 (65%), Gaps = 10/212 (4%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + S P +KAI + + T +QA TIP L GRD+ G A TG+GKT AF++P +E
Sbjct: 114 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE- 172
Query: 153 LLY----KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
LLY KPR+ T V+++ PTREL +Q++ V R+L QF S + +GG + + + +
Sbjct: 173 LLYSLKIKPRN--GTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATK 230
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSR 267
L K ++++ATPGRLLDHL NT F S+++ LV+DEADR+L+ F +MK+II+ L +
Sbjct: 231 LAKGVNLLVATPGRLLDHLKNT-QFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNE 289
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
RQ+MLFSAT T V DL +SL RP ++++
Sbjct: 290 NRQSMLFSATQTTKVEDLARISL-RPGPLYIN 320
>gi|238882849|gb|EEQ46487.1| hypothetical protein CAWG_04842 [Candida albicans WO-1]
Length = 569
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 139/212 (65%), Gaps = 10/212 (4%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F + S P +KAI + + T +QA TIP L GRD+ G A TG+GKT AF++P +E
Sbjct: 114 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE- 172
Query: 153 LLY----KPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
LLY KPR+ T V+++ PTREL +Q++ V R+L QF S + +GG + + + +
Sbjct: 173 LLYSLKIKPRN--GTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATK 230
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-LCSR 267
L K ++++ATPGRLLDHL NT F S+++ LV+DEADR+L+ F +MK+II+ L +
Sbjct: 231 LAKGVNLLVATPGRLLDHLKNT-QFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNE 289
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVD 299
RQ+MLFSAT T V DL +SL RP ++++
Sbjct: 290 NRQSMLFSATQTTKVEDLARISL-RPGPLYIN 320
>gi|182413406|ref|YP_001818472.1| DEAD/DEAH box helicase [Opitutus terrae PB90-1]
gi|177840620|gb|ACB74872.1| DEAD/DEAH box helicase domain protein [Opitutus terrae PB90-1]
Length = 403
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 5/207 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F ++ L L A+ ++Y+ PTPIQA IP+ L G D+ G A TGTGKTAAF LPI
Sbjct: 2 DTAFSKLGLQDALAYAVQKMDYVEPTPIQAQAIPIVLKGGDVIGSAQTGTGKTAAFALPI 61
Query: 150 LERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
++RL R R L+L PTREL +QV + + A+FT + V + GG+ Q S L
Sbjct: 62 IQRLSTHGR----LRCLILEPTRELALQVEEAFHKFAKFTDLRVTIVYGGVGYGKQTSDL 117
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
++ DI+ ATPGRLLDHL + SL D+E+LVLDE DRMLD F +++I++ C + R
Sbjct: 118 KRGMDILAATPGRLLDHL-GQGNCSLEDVEILVLDEVDRMLDMGFLPDVRKIVQRCPKAR 176
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRV 296
QT+ FSAT+ + L +L P +V
Sbjct: 177 QTLFFSATLPPELEQLAGWALHNPTKV 203
>gi|302758696|ref|XP_002962771.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
gi|300169632|gb|EFJ36234.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
Length = 786
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 3/227 (1%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+ F + LS P+ +AI Y PTPIQ T+P+ L G D+ A TG+GKTAAF++P+
Sbjct: 23 SGGFESLGLSPPIYQAIRKKGYSVPTPIQRKTLPLILAGNDVVAMARTGSGKTAAFLIPM 82
Query: 150 LERL-LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
LE+L + P+ R L+L PTREL +Q ++ ++L + T + + + VGG ++ Q
Sbjct: 83 LEKLRAHSPKP--GARALILSPTRELALQTFKFCKELGRNTDLRITVLVGGDSMETQFEQ 140
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K PDI+IATPGRL+ HL SL +E +V DEADR+ + FA Q+++I+
Sbjct: 141 LSKNPDILIATPGRLMHHLSEVEGMSLKSVEYVVFDEADRLFEMGFAEQLRQILTQLHEL 200
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
RQT+LFSAT+ + D L P+ V +D +++ +L+ F +
Sbjct: 201 RQTLLFSATLPRLLADFAKAGLKDPLTVRLDTETKISPDLKLAFFTM 247
>gi|254251800|ref|ZP_04945118.1| DEAD/DEAH box helicase-like [Burkholderia dolosa AUO158]
gi|124894409|gb|EAY68289.1| DEAD/DEAH box helicase-like [Burkholderia dolosa AUO158]
Length = 511
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 145/259 (55%), Gaps = 12/259 (4%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A P + N F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 28 AKPADAN--FDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTA 85
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ T + A+ G
Sbjct: 86 SFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 145
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 146 GVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 204
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
+ I+ L + RQT+LFSAT + + L S L P + V ++ N+ Q +
Sbjct: 205 QRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEG 264
Query: 319 DEVRLYNVLGLMLLRENCL 337
D+ + LLRE L
Sbjct: 265 DK----QAAVVQLLRERGL 279
>gi|424871855|ref|ZP_18295517.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393167556|gb|EJC67603.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 602
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F + +S+P++ + L PTPIQ IP+ L GRD+ G A TGTGKTAAF LP++
Sbjct: 48 TNFESLGVSKPIVATLFQLGIETPTPIQEHAIPLLLEGRDLIGLAQTGTGKTAAFGLPLI 107
Query: 151 ERLLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
E+LL R D++ TR L+L PTREL Q+ + ++ + +S+ + + VGG+ + Q+
Sbjct: 108 EKLLADERRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVSINKQQLQ 167
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K DI++ATPGRLLD L N + +L+ + LVLDEAD+MLD F +++I ++ +
Sbjct: 168 LEKGTDILVATPGRLLD-LINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKIAKMVPKK 226
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVSFSN 317
RQTMLFSATM A+ DL L PV+V V + A + Q FV+ N
Sbjct: 227 RQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKN 277
>gi|170691820|ref|ZP_02882984.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
gi|170143104|gb|EDT11268.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
Length = 493
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 136/226 (60%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
++F Q L+ +LKA+ Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 TATFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV + A+ T++ A+ GG+++
Sbjct: 70 IQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQSYAKHTALRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QSEQLRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L + L P + V ++ A N+ Q
Sbjct: 189 LPKERQTLLFSATFSGEIKKLAATYLRDPQTIEVARSNSTATNVTQ 234
>gi|407780047|ref|ZP_11127295.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
gi|407298177|gb|EKF17321.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
Length = 477
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 129/226 (57%), Gaps = 1/226 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + LS +L A+ Y PTPIQA IP AL G+D+ G A TGTGKTA+F+LP+L
Sbjct: 2 TFSDLGLSPKVLSAVTDAGYTEPTPIQAGAIPHALAGKDVLGIAQTGTGKTASFVLPMLT 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + R L+L PTREL QV + + + + +AL +GG+ QE L +
Sbjct: 62 RLERGRARARMPRTLILEPTRELAAQVEENFVKYGKNHRLNIALLIGGVSFDEQEKKLER 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
D++IATPGR+LDH L+ +E+LV+DEADRMLD F ++ I +L TRQT
Sbjct: 122 GADVLIATPGRMLDHFERG-KLLLTGVEILVIDEADRMLDMGFIPDIERICKLIPFTRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
+ FSATM + L L PVRV V A N+ Q FV +
Sbjct: 181 LFFSATMPPEITKLTEQFLQGPVRVEVSRPATTATNITQRFVKVGS 226
>gi|410862930|ref|YP_006978164.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii AltDE1]
gi|410820192|gb|AFV86809.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii AltDE1]
Length = 480
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 2/206 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKAI + P+PIQ IP L G+D+ A TGTGKTA F LPIL+
Sbjct: 2 SFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLEGKDVLAAAQTGTGKTAGFGLPILQ 61
Query: 152 RLLYKPR-DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ P+ N R L+L PTREL QV + ++F ++ A+ GG+ + Q LR
Sbjct: 62 RLMSGPKVSANNVRALILTPTRELAAQVEESICAFSEFLPLKTAVVFGGVGINPQMIKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLD L+ + S +EVLVLDEADRMLD F +K +++L RQ
Sbjct: 122 KGVDVLIATPGRLLD-LYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPEDRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRV 296
++LFSAT +D + L PV +
Sbjct: 181 SLLFSATFSDEITTLAKTITRNPVSI 206
>gi|402565885|ref|YP_006615230.1| DEAD/DEAH box helicase [Burkholderia cepacia GG4]
gi|402247082|gb|AFQ47536.1| DEAD/DEAH box helicase domain protein [Burkholderia cepacia GG4]
Length = 574
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 59 GLTHDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQ 114
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 115 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELA 174
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ T + A+ GG+++ Q + LR+ +I+IATPGRLLDH+ + +L
Sbjct: 175 DQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQK-TANL 233
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 234 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQT 293
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 294 IEVARSNSTNANVTQ 308
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 109 LNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQNTRVLVL 168
+ Y PT IQA +P AL GRDI G A+TG+GKTAAF LPIL++L +P+ VL
Sbjct: 1 MQYKAPTEIQAEVLPHALQGRDIIGVASTGSGKTAAFALPILQKLWEEPK---GLFACVL 57
Query: 169 VPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLH 228
PTREL VQ+ Q + V A +GG+++ Q+ L K P IV+ATPGRL DHL
Sbjct: 58 APTRELAVQIAQQFESIGSAMGVRCATIIGGVDIMAQKVALAKKPHIVVATPGRLNDHLE 117
Query: 229 NTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSV 288
T FSL ++ LVLDEADR+LD F + +I+++ + R T LFSATMT V L
Sbjct: 118 ETKGFSLRSLQFLVLDEADRLLDMDFGPIIDKILKVIPKERTTYLFSATMTTKVAKLQRA 177
Query: 289 SLTRPVRVFVDNNHEVALNLRQEFV 313
SL+ PVR+ V++ + L Q ++
Sbjct: 178 SLSNPVRIEVNSKYSTVSTLLQYYL 202
>gi|119468940|ref|ZP_01611965.1| putative ATP-dependent RNA helicase (rhlE-like) [Alteromonadales
bacterium TW-7]
gi|119447592|gb|EAW28859.1| putative ATP-dependent RNA helicase (rhlE-like) [Alteromonadales
bacterium TW-7]
Length = 415
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 144/248 (58%), Gaps = 7/248 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+SF +NL LL AI NY PT IQ TIP L G D+ G A TGTGKTAAF+LP+L
Sbjct: 4 TSFSSLNLDPLLLTAIEQNNYTTPTAIQIKTIPPILAGNDVMGSAQTGTGKTAAFVLPLL 63
Query: 151 ERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+LL P+ D+ RV++L PTREL QV+ + AQ ++V+ AL+ GG + Q
Sbjct: 64 HKLLNTPKKDEPGIARVVILTPTRELAQQVFASFEKYAQGSNVQGALAYGGASIGPQIKA 123
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K +++ATPGRLLDH+ S LS ++ LV DEADRMLD F ++K I+R
Sbjct: 124 L-KTAQVIVATPGRLLDHIVKG-SVVLSSVDSLVFDEADRMLDMGFIDEIKRILRHIPGD 181
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLG 328
RQT+LFSAT D+V L L P + VD + A+ + Q + +DE R ++
Sbjct: 182 RQTLLFSATFDDSVFGLSEKLLKNPELIEVDKRNSAAVEVEQIIYA---VDEDRKRELVS 238
Query: 329 LMLLRENC 336
M+ +N
Sbjct: 239 HMIGMKNW 246
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 139/231 (60%), Gaps = 3/231 (1%)
Query: 83 DAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKT 142
+A E+ +S+ M L L +A AL + P+ IQ IP+AL G+D+ G A TG+GKT
Sbjct: 49 NADSEEKQASWEDMGLIDTLCEACRALKWKAPSKIQREAIPLALQGKDVIGLAETGSGKT 108
Query: 143 AAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEV 202
AF LPIL+ LL P Q ++L PTREL Q+ + L ++ + VGG+++
Sbjct: 109 GAFALPILQALLENP---QRYFAVILTPTRELAYQISEQFEALGASIGIKCCVIVGGMDM 165
Query: 203 KVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEII 262
Q L + P I+IATPGRL+DHL NT F+L ++ LV+DEADR+L+ F ++++I+
Sbjct: 166 VSQALHLARKPHIIIATPGRLVDHLENTKGFNLKAVKYLVMDEADRILNLDFEVELEKIL 225
Query: 263 RLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ R R+T LFSATMT V L SL PV+V V + ++ L Q ++
Sbjct: 226 KVIPRERRTFLFSATMTKKVKKLERASLKDPVKVEVSSKYQTVEKLLQYYI 276
>gi|332142673|ref|YP_004428411.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552695|gb|AEA99413.1| ATP-dependent RNA helicase RhlE [Alteromonas macleodii str. 'Deep
ecotype']
Length = 480
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 2/206 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF Q+ L+ PLLKAI + P+PIQ IP L G+D+ A TGTGKTA F LPIL+
Sbjct: 2 SFTQLGLAEPLLKAIEKRGFSTPSPIQEKAIPEVLEGKDVLAAAQTGTGKTAGFGLPILQ 61
Query: 152 RLLYKPR-DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ P+ N R L+L PTREL QV + ++F ++ A+ GG+ + Q LR
Sbjct: 62 RLMSGPKVSANNVRALILTPTRELAAQVEESICAFSEFLPLKTAVVFGGVGINPQMIKLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLD L+ + S +EVLVLDEADRMLD F +K +++L RQ
Sbjct: 122 KGVDVLIATPGRLLD-LYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPEDRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRV 296
++LFSAT +D + L PV +
Sbjct: 181 SLLFSATFSDEITTLAKTITRNPVSI 206
>gi|414071617|ref|ZP_11407582.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. Bsw20308]
gi|410805979|gb|EKS11980.1| ATP-dependent RNA helicase rhlE [Pseudoalteromonas sp. Bsw20308]
Length = 415
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 144/248 (58%), Gaps = 7/248 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F +NL LL AI NY PT IQ TIP L G D+ G A TGTGKTAAF+LP+L
Sbjct: 4 TTFSSLNLDPLLLTAIEQNNYTQPTAIQIKTIPPILAGSDVMGSAQTGTGKTAAFVLPLL 63
Query: 151 ERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+LL P+ D+ RV++L PTREL QV+ + AQ T + AL+ GG+ + Q
Sbjct: 64 HKLLNTPKKDEQGLARVVILTPTRELAQQVFASFEKYAQGTHINGALAYGGVSIGPQIKA 123
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K +++ATPGRLLDH+ S LS ++ LV DEADRMLD F +++ I+R
Sbjct: 124 L-KTAQVIVATPGRLLDHIVKG-SVVLSSVDSLVFDEADRMLDMGFIDEIRRILRHIPGD 181
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLG 328
RQT+LFSAT D+V +L L P + VD + A+ + Q + +DE R ++
Sbjct: 182 RQTLLFSATFDDSVFELSKKLLKNPELIEVDKRNSAAVEVEQVIYA---VDEDRKRELVS 238
Query: 329 LMLLRENC 336
M+ +N
Sbjct: 239 HMIGMKNW 246
>gi|145230033|ref|XP_001389325.1| ATP-dependent RNA helicase has1 [Aspergillus niger CBS 513.88]
gi|143019625|sp|A2Q9T6.1|HAS1_ASPNC RecName: Full=ATP-dependent RNA helicase has1
gi|134055440|emb|CAK43955.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 137/218 (62%), Gaps = 7/218 (3%)
Query: 89 ENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLP 148
E F ++NLS +K I + + T IQ TIP L GRD+ G A TG+GKT +F++P
Sbjct: 123 EPKKFTELNLSEKTMKGIQDMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIP 182
Query: 149 ---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQ 205
+L L +KPR+ T VLV+ PTREL +Q++ V R+L S + +GG + +
Sbjct: 183 AVEMLSALRFKPRN--GTGVLVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANRRAE 240
Query: 206 ESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIR-L 264
L K +++IATPGRLLDHL NTP F +++ LV+DEADR+L+ F +M++I++ L
Sbjct: 241 AEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKIL 300
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNH 302
S RQTMLFSAT T V DL +SL RP ++++ +H
Sbjct: 301 PSEERQTMLFSATQTTKVEDLARISL-RPGPLYINVDH 337
>gi|398803769|ref|ZP_10562787.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
gi|398096022|gb|EJL86353.1| DNA/RNA helicase, superfamily II [Polaromonas sp. CF318]
Length = 481
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 145/244 (59%), Gaps = 7/244 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF ++L+ PL +A+ + Y TPIQ IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLQGKDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+R++ + R LVL+PTREL VQV Q A++T++ + GG+++K
Sbjct: 62 LQRMMKHENPSTSPARHPVRALVLLPTRELAVQVAQQVELYAKYTNLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTAELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSY 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR-L 323
+ R T+LFSAT + + L S L PV + V ++ A + Q F S D+ R L
Sbjct: 181 LPKQRITLLFSATFSPEIKRLASSYLQDPVTIEVARSNATASTVEQHFYSVGADDKRRAL 240
Query: 324 YNVL 327
+ +L
Sbjct: 241 HQIL 244
>gi|237845351|ref|XP_002371973.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|61676032|gb|AAX51681.1| DEAD box RNA helicase [Toxoplasma gondii]
gi|211969637|gb|EEB04833.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 479
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 135/224 (60%), Gaps = 5/224 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L L ++ L + PT IQ+ +P AL GRDI A TG+GKTAAF LPIL+
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLL + Q L+L PTREL +Q+ Q + V V VGGL+ Q L K
Sbjct: 112 RLLQR---TQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT--R 269
P +V+ +PGR++DHL T FSL ++VLVLDEADR+L F + ++ ++ R
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAER 228
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMT V+ L SL +PV++ V++ ++VA +L+Q F+
Sbjct: 229 QTMLFSATMTTKVSKLQKASLKKPVKLEVNSKYDVASHLQQHFL 272
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 136/229 (59%), Gaps = 3/229 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + + L + L + P+ IQ IPVAL G D+ G A TG+GKT AF +P+L+
Sbjct: 21 TFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLAETGSGKTGAFCIPVLQ 80
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
LL P Q LVL PTREL Q+ + + L ++ + VGG+++ Q+ +L K
Sbjct: 81 ALLENP---QRLFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVGGVDMMGQQIILAK 137
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
P +V+ATPGRL+DHL T F+L I+ LVLDEADR+L+ F S++ I+++ R R+T
Sbjct: 138 KPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESELDTILKVIPRERRT 197
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDE 320
LFSATMT V L +LT+PV+ V+N + L Q ++ + D+
Sbjct: 198 FLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQYYLFLPSKDK 246
>gi|421467479|ref|ZP_15916098.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC BAA-247]
gi|400233671|gb|EJO63196.1| DEAD/DEAH box helicase [Burkholderia multivorans ATCC BAA-247]
Length = 487
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 DATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV A+ T + A+ GG+++
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 189 LPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
>gi|289623983|ref|ZP_06456937.1| ATP-dependent RNA helicase rhlE, putative [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648770|ref|ZP_06480113.1| ATP-dependent RNA helicase rhlE, putative [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422584152|ref|ZP_16659265.1| ATP-dependent RNA helicase rhlE [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868972|gb|EGH03681.1| ATP-dependent RNA helicase rhlE [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 442
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 139/235 (59%), Gaps = 3/235 (1%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L PLL+A+ AL Y PTP+Q IP L GRD+ A TGTGKTA F LP+L+
Sbjct: 2 TFASLGLIEPLLRALEALGYQTPTPVQTQAIPAVLAGRDLMAAAQTGTGKTAGFALPLLQ 61
Query: 152 RL-LYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
RL + P+ N R LVL PTREL QV++ RQ A+ + + GG+ + Q L
Sbjct: 62 RLTMEGPKVAPNCVRALVLAPTRELADQVHESIRQYAEHLPLSTYAAYGGVSINPQMMKL 121
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
RK D+++ATPGRLLD LH + S ++ L+LDEADRMLD FA +++ I + + R
Sbjct: 122 RKGVDVLVATPGRLLD-LHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIYAVLPKQR 180
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLY 324
QT+LFSAT +D + L + L P+ + V + A +++Q V+ + L+
Sbjct: 181 QTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLF 235
>gi|255037844|ref|YP_003088465.1| DEAD/DEAH box helicase [Dyadobacter fermentans DSM 18053]
gi|254950600|gb|ACT95300.1| DEAD/DEAH box helicase domain protein [Dyadobacter fermentans DSM
18053]
Length = 445
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
E ++F Q L+R LL AI Y PTPIQ IPVAL G+DI G A TGTGKTAA+ L
Sbjct: 3 ETQNTFEQFKLNRQLLNAIEEAGYTEPTPIQEQAIPVALAGQDILGIAQTGTGKTAAYTL 62
Query: 148 PILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
P+L R+ Y Q+ R L+L PTREL +Q+ + QL+++T + + GG+ K Q
Sbjct: 63 PLLMRIKYA--QGQHPRALILAPTRELAMQISEAIAQLSKYTDIRTVVLYGGVGPKTQIE 120
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+RK DI++ATPGR +D L+ + + V+VLDEAD+M+D F Q+++++ + R
Sbjct: 121 AIRKGVDIIVATPGRFMD-LYFQEEIVVKHLNVMVLDEADKMMDMGFMPQIRKLLEVIPR 179
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRV 296
RQ MLFSAT + V +L L P R+
Sbjct: 180 KRQNMLFSATFSGKVENLSYEFLEFPTRI 208
>gi|83952321|ref|ZP_00961053.1| ATP-dependent RNA helicase RhlE [Roseovarius nubinhibens ISM]
gi|83837327|gb|EAP76624.1| ATP-dependent RNA helicase RhlE [Roseovarius nubinhibens ISM]
Length = 552
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 130/225 (57%), Gaps = 1/225 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+ F ++NL+ +LKAI Y PTPIQA IP AL GRD+ G A TGTGKTA+F LP+L
Sbjct: 2 TKFSELNLNAKVLKAIDEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPML 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L + R LVL PTREL QV + ++ + AL +GG+ K QE ++
Sbjct: 62 SLLARGRARARMPRSLVLCPTRELAAQVAENFDTYSKHLKLTKALLIGGVSFKEQEQIID 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLDH LSD++V+V+DEADRMLD F ++ I L TRQ
Sbjct: 122 KGVDVLIATPGRLLDHFERG-KLILSDVKVMVVDEADRMLDMGFIPDIERIFGLTPFTRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSF 315
T+ FSATM + + + L+ P RV V + + Q V F
Sbjct: 181 TLFFSATMAPEIERITNTFLSNPARVEVARQATASETIEQGVVMF 225
>gi|221502154|gb|EEE27898.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 479
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 135/224 (60%), Gaps = 5/224 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + L L ++ L + PT IQ+ +P AL GRDI A TG+GKTAAF LPIL+
Sbjct: 52 TFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPILQ 111
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RLL + Q L+L PTREL +Q+ Q + V V VGGL+ Q L K
Sbjct: 112 RLLQR---TQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT--R 269
P +V+ +PGR++DHL T FSL ++VLVLDEADR+L F + ++ ++ R
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHVGSPAER 228
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QTMLFSATMT V+ L SL +PV++ V++ ++VA +L+Q F+
Sbjct: 229 QTMLFSATMTTKVSKLQKASLKKPVKLEVNSKYDVASHLQQHFL 272
>gi|126736040|ref|ZP_01751784.1| ATP-dependent RNA helicase, putative [Roseobacter sp. CCS2]
gi|126714597|gb|EBA11464.1| ATP-dependent RNA helicase, putative [Roseobacter sp. CCS2]
Length = 484
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 132/227 (58%), Gaps = 1/227 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
+ F +NL+ +LKA+ Y PTPIQA I AL GRD+ G A TGTGKTAAF LP++
Sbjct: 2 TKFSDLNLAPKVLKAVTETGYDTPTPIQAGAIAPALEGRDVLGIAQTGTGKTAAFTLPMI 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
L + R LVL PTREL QV + A++T + AL +GG K Q+ ++
Sbjct: 62 TLLGRGRARARMPRSLVLAPTRELAAQVAENFDAYAKYTKLSRALLIGGTSFKDQDKIID 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D++IATPGRLLDHL L+D++++V+DEADRMLD F ++EI + TRQ
Sbjct: 122 KGVDVLIATPGRLLDHLERG-KLILTDVKIMVVDEADRMLDMGFIPDIEEIFKRTPFTRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
T+ FSATM + + + L+ P ++ V N++Q V F
Sbjct: 181 TLFFSATMAPEIERITNTFLSNPAKIEVARAATTNTNIKQGVVMFKG 227
>gi|254247597|ref|ZP_04940918.1| Helicase [Burkholderia cenocepacia PC184]
gi|124872373|gb|EAY64089.1| Helicase [Burkholderia cenocepacia PC184]
Length = 521
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 8 GLTHDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAPDILKAIVEQGYTTPTPIQAQ 63
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 64 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELA 123
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ T + A+ GG+++ Q + LR+ +I+IATPGRLLDH+ + +L
Sbjct: 124 DQVAANVHAYAKHTPLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQK-TANL 182
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 183 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQT 242
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 243 IEVARSNSTNANVTQ 257
>gi|83858471|ref|ZP_00951993.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Oceanicaulis sp. HTCC2633]
gi|83853294|gb|EAP91146.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Oceanicaulis sp. HTCC2633]
Length = 480
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 131/226 (57%), Gaps = 1/226 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F + LS LL AI Y PTPIQ IPVAL GRD+ G A TGTGKTA+F LP++E
Sbjct: 2 TFEDLGLSPALLSAIADAGYEKPTPIQEGAIPVALTGRDVLGIAQTGTGKTASFTLPMIE 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
RL + R LVL PTREL QV + A+ + +AL +GG+ + Q+ +L +
Sbjct: 62 RLSRGRARARMPRSLVLAPTRELAAQVADNVKLYAKNHKLNMALLIGGVSFEPQKKILDQ 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI+IATPGRLLDH L+ +E+LV+DEADRMLD F ++ I++L RQT
Sbjct: 122 GADILIATPGRLLDHFERG-GLLLTGVEILVIDEADRMLDMGFIPDIERILKLLPPRRQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSN 317
+ FSATM + LV L P RV V + A + Q + S+
Sbjct: 181 LFFSATMPGEIKHLVDTFLRDPERVEVTRPAQTADTITQFILRVSD 226
>gi|396496328|ref|XP_003844718.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
gi|312221299|emb|CBY01239.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
Length = 613
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 142/235 (60%), Gaps = 8/235 (3%)
Query: 85 PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
P +E + F ++NLS ++AI + + T IQ TIP L G+D+ G A TG+GKT A
Sbjct: 128 PSMENPTKFSELNLSDRTMEAIKNMGFETMTEIQQKTIPPLLSGKDVLGAAKTGSGKTLA 187
Query: 145 FMLPILERL---LYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
F++P +E L +KPR+ T V+V+ PTREL +Q++ V R+L + S + +GG
Sbjct: 188 FLIPAIEMLSAMRFKPRN--GTGVIVVSPTRELALQIFGVARELMEKHSQTFGIVIGGAN 245
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ + L K +++IATPGRLLDHLHNT F +++ L++DEADR+L+ F +M+ +
Sbjct: 246 RRAEAEKLVKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSV 305
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLT-RPVRVFVD--NNHEVALNLRQEFV 313
I++ RQTMLFSAT T V DL +SL P+ + VD H L Q +V
Sbjct: 306 IKILPSDRQTMLFSATQTTKVEDLARISLKPGPLYINVDYRKEHSTVEGLEQGYV 360
>gi|403214400|emb|CCK68901.1| hypothetical protein KNAG_0B04660 [Kazachstania naganishii CBS
8797]
Length = 494
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 157/299 (52%), Gaps = 27/299 (9%)
Query: 37 MKHDNIKNRQK-------LIGKKKQKRLAKEGKLKQVEAEEYEENEGGKEFFEDAPPVEE 89
M D I+ + K L+ K K K L + K+ + E + ++G +F + E+
Sbjct: 1 MAGDKIRKKSKATKETASLVAKIKAKALENQKKISTNDEEVH--SDGVSDFKPSSKQAEK 58
Query: 90 NSSFH--------------QMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
N+ ++NL LL+A LNY PTPIQ+ +IP AL G+DI G A
Sbjct: 59 NADVSTQDDDDEESFESFEELNLVPELLEACKNLNYSKPTPIQSRSIPPALKGKDIIGLA 118
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TG+GKTAAF +PIL L + D Q +L PTREL Q+ + L V
Sbjct: 119 QTGSGKTAAFAIPILNSLWH---DQQPYYACILSPTRELAQQIKETFDSLGSLMGVRSVC 175
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGG+ + Q L + P I+I TPGRL+DHL NT FSL +++ LV+DEADR+LD F
Sbjct: 176 IVGGMNMMDQARDLMRKPHIIIGTPGRLMDHLENTRGFSLRNLKYLVMDEADRLLDMEFG 235
Query: 256 SQMKEIIRLC-SRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
+ I+++ ++ R T LFSATMT ++ L SLT PV+ V ++ L Q +
Sbjct: 236 PVLDRILKIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSTKYQTVDTLVQTLM 294
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 133/221 (60%), Gaps = 3/221 (1%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F ++ + L +A L + P+ IQ IP L G+D+ G A TG+GKT AF LPIL+
Sbjct: 1 FEKLGICTQLAEAAAGLGWKSPSNIQEQAIPHLLQGQDVIGLAQTGSGKTGAFSLPILQA 60
Query: 153 LLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKC 212
L+ +P Q L+L PTREL +Q+ + L V+ A+ VGG+++ Q L K
Sbjct: 61 LMERP---QEHFALILSPTRELAIQIAEQVEALGSGIGVKCAVLVGGIDMMAQAIALAKR 117
Query: 213 PDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTM 272
P I++ TPGR++DHL NT F+L ++ LVLDEAD++LD F ++ +I+++ R R+T
Sbjct: 118 PHILVGTPGRVVDHLSNTKGFNLKQLKHLVLDEADKLLDMDFEQEIDQILKVIPRDRRTQ 177
Query: 273 LFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
LFSATMT+ V L L RPV+V V + LRQ++V
Sbjct: 178 LFSATMTNKVQKLQRACLVRPVKVEVAAKYSTVETLRQQYV 218
>gi|167562078|ref|ZP_02354994.1| ATP-dependent RNA helicase RhlE [Burkholderia oklahomensis EO147]
Length = 408
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 139/232 (59%), Gaps = 8/232 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A PV +++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 6 ATPV--DATFDQFGLAAEILKAIADQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTA 63
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ T + A+ G
Sbjct: 64 SFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 123
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +++IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 124 GVDMNPQMAELRRGVEVLIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 182
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ I+ L + RQT+LFSAT + + L S L P + V ++ A N+ Q
Sbjct: 183 QRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNATATNVTQ 234
>gi|377820266|ref|YP_004976637.1| DEAD/DEAH box helicase [Burkholderia sp. YI23]
gi|357935101|gb|AET88660.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. YI23]
Length = 496
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 133/224 (59%), Gaps = 6/224 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q L+ +LKA+ Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI++
Sbjct: 18 TFDQFGLAADILKAVRESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 77
Query: 152 RLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
RLL + R L+L PTREL QV + ++ T + + GG+++ Q
Sbjct: 78 RLLPSANTSASPARHPVRALMLTPTRELADQVAANVQTYSKHTPLRSTVVFGGVDMNPQS 137
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 138 DALRRGVEILIATPGRLLDHVQQK-TVNLGQVQMLVLDEADRMLDMGFLPDLQRILNLLP 196
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L S L P + V ++ A N+RQ
Sbjct: 197 KERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVRQ 240
>gi|107023254|ref|YP_621581.1| DEAD/DEAH box helicase [Burkholderia cenocepacia AU 1054]
gi|116690337|ref|YP_835960.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|170733675|ref|YP_001765622.1| DEAD/DEAH box helicase [Burkholderia cenocepacia MC0-3]
gi|105893443|gb|ABF76608.1| DEAD/DEAH box helicase-like protein [Burkholderia cenocepacia AU
1054]
gi|116648426|gb|ABK09067.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
HI2424]
gi|169816917|gb|ACA91500.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
MC0-3]
Length = 520
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 7 GLTHDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAPDILKAIVEQGYTTPTPIQAQ 62
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 63 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELA 122
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ T + A+ GG+++ Q + LR+ +I+IATPGRLLDH+ + +L
Sbjct: 123 DQVAANVHAYAKHTPLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHVQQK-TANL 181
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 182 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQT 241
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 242 IEVARSNSTNANVTQ 256
>gi|344257761|gb|EGW13865.1| ATP-dependent RNA helicase DDX54 [Cricetulus griseus]
Length = 861
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 138/227 (60%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K I Y PTPIQ TIPV L G+D+ A TG+GKTA F+L
Sbjct: 76 KKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLL 135
Query: 148 PILERLLYKPRDDQ-NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
P+ ERL K R Q R L+L PTREL +Q + T++L +FT ++ AL +GG +++ Q
Sbjct: 136 PMFERL--KARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQF 193
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+ L + PDI+IATPGRL+ H+ + L +E +V DEADR+ + FA Q++EII
Sbjct: 194 AALHENPDIIIATPGRLM-HVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLP 252
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT+LFSAT+ + + LT PV + +D + ++ L+ F+
Sbjct: 253 GGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFL 299
>gi|78067127|ref|YP_369896.1| DEAD/DEAH box helicase [Burkholderia sp. 383]
gi|77967872|gb|ABB09252.1| DEAD/DEAH box helicase-like protein [Burkholderia sp. 383]
Length = 527
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 61 GKLKQVEAEEYEENEGGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAA 120
G V A +E N + A PV+ ++F Q L+ +LKAI Y PTPIQA
Sbjct: 7 GLTHDVPAAPFERNATMSDSV--AKPVD--ATFDQFGLAADILKAIAEQGYTTPTPIQAQ 62
Query: 121 TIPVALLGRDICGCAATGTGKTAAFMLPILERLLYKPRDDQN-----TRVLVLVPTRELG 175
IPV L GRD+ G A TGTGKTA+F LPI++RLL + + R L+L PTREL
Sbjct: 63 AIPVVLAGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELA 122
Query: 176 VQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSL 235
QV A+ T + A+ GG+++ Q + LR+ +++IATPGRLLDH+ + +L
Sbjct: 123 DQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEVLIATPGRLLDHVQQK-TANL 181
Query: 236 SDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVR 295
+++LVLDEADRMLD F ++ I+ L + RQT+LFSAT + + L S L P
Sbjct: 182 GQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLLFSATFSGEIKKLASTYLRNPQT 241
Query: 296 VFVDNNHEVALNLRQ 310
+ V ++ N+ Q
Sbjct: 242 IEVARSNSTNANVTQ 256
>gi|424882925|ref|ZP_18306557.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392519288|gb|EIW44020.1| DNA/RNA helicase, superfamily II [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 605
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 146/238 (61%), Gaps = 5/238 (2%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
AP ++F + +S+P++ + L PTPIQ IP+ L GRD+ G A TGTGKTA
Sbjct: 41 APKGYTLTNFESLGVSKPIVATLFQLGIETPTPIQEHAIPLLLEGRDLIGLAQTGTGKTA 100
Query: 144 AFMLPILERLLYKPR--DDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
AF LP++E+LL R D++ TR L+L PTREL Q+ + ++ + +S+ + + VGG+
Sbjct: 101 AFGLPLIEKLLADERRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSLRINVVVGGVS 160
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ Q+ L K DI++ATPGRLLD L N + +L+ + LVLDEAD+MLD F +++I
Sbjct: 161 INKQQLQLEKGTDILVATPGRLLD-LINRRAITLTAVRYLVLDEADQMLDLGFVHDLRKI 219
Query: 262 IRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ--EFVSFSN 317
++ + RQTMLFSATM A+ DL L PV+V V + A + Q FV+ N
Sbjct: 220 AKMVPKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYVHFVAGKN 277
>gi|415909527|ref|ZP_11553150.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
gi|407762572|gb|EKF71396.1| ATP-dependent RNA helicase [Herbaspirillum frisingense GSF30]
Length = 493
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 138/244 (56%), Gaps = 9/244 (3%)
Query: 93 FHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILER 152
F LS +LKA+ Y++PTPIQA IPV L GRD+ G A TGTGKTA F LPI++R
Sbjct: 18 FEDFGLSPDILKALAEQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQR 77
Query: 153 LLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
LL + R L+L PTREL QV +FT + + GG+++ Q +
Sbjct: 78 LLQHASHSASPARHPVRALILTPTRELADQVADNVAAYCRFTPLRSTVVFGGVDMSPQTA 137
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
+LR +IVIATPGRLLDH+ + +LS ++LV+DEADRMLD F ++ II L +
Sbjct: 138 ILRAGVEIVIATPGRLLDHVQQK-TVNLSQTQILVMDEADRMLDMGFLPDLQRIINLLPK 196
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVL 327
RQ +LFSAT + + L + PV + V ++ A N+ Q + +DE + +
Sbjct: 197 QRQNLLFSATFSPEIKKLAASFQNNPVTIEVARSNATAENVTQ---TIYKVDEAAKADAV 253
Query: 328 GLML 331
++
Sbjct: 254 SFII 257
>gi|167761792|ref|ZP_02433919.1| hypothetical protein BACSTE_00133 [Bacteroides stercoris ATCC
43183]
gi|167700298|gb|EDS16877.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 372
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 1/207 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F +N++ P+LKAI Y PTPIQ IP AL G+DI GCA TGTGKTAAF +PI++
Sbjct: 2 TFKDLNITEPILKAIEEKGYANPTPIQVKAIPAALTGKDILGCAQTGTGKTAAFAIPIIQ 61
Query: 152 RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLRK 211
L D++ + L+L PTREL +Q+ + A++T V + GG+ + Q ++L K
Sbjct: 62 HLQVLKNRDKSIKALILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRAQVNMLHK 121
Query: 212 CPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQT 271
DI++ATPGRLLD L N L ++ VLDEADRMLD F +K ++ + +QT
Sbjct: 122 GVDILVATPGRLLD-LMNQGYIHLDNVRHFVLDEADRMLDMGFIHDIKRLLPKLPKEKQT 180
Query: 272 MLFSATMTDAVNDLVSVSLTRPVRVFV 298
+ FSATM D + L + L +PV++ +
Sbjct: 181 LFFSATMPDTIIALTNSLLKQPVKITI 207
>gi|386818532|ref|ZP_10105750.1| DEAD/DEAH box helicase domain protein [Thiothrix nivea DSM 5205]
gi|386423108|gb|EIJ36943.1| DEAD/DEAH box helicase domain protein [Thiothrix nivea DSM 5205]
Length = 446
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 139/245 (56%), Gaps = 6/245 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF ++ L+ PLL+AI Y PTPIQ IP L GRD+ A TGTGKTA F LP+L
Sbjct: 2 SFSELGLAEPLLRAIAEQGYATPTPIQQQGIPAVLSGRDLMAAAQTGTGKTAGFTLPMLH 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL+ R N R LVL PTREL QV + R + + GG+ + Q LR
Sbjct: 62 RLMEGKRPASNHIRALVLTPTRELAAQVGESVRDYGAHLPLASTIVFGGVSINPQMMALR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRLLD L+ + S +E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGVDVLVATPGRLLD-LYEQNAVKFSQVEMLVLDEADRMLDMGFIRDIRKILALLPKRRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLGLM 330
+LFSAT +D + L L P++V V + A ++Q S ID+ R +L
Sbjct: 181 NLLFSATFSDDITALAKGLLHDPLQVSVSPRNAAANTVKQ---SVYLIDKARKTALLS-H 236
Query: 331 LLREN 335
L+R+N
Sbjct: 237 LVRDN 241
>gi|408375064|ref|ZP_11172741.1| DEAD/DEAH box helicase [Alcanivorax hongdengensis A-11-3]
gi|407765040|gb|EKF73500.1| DEAD/DEAH box helicase [Alcanivorax hongdengensis A-11-3]
Length = 460
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 142/229 (62%), Gaps = 2/229 (0%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SSF +NL L++A+ L+ PTP+Q A IP AL G D+ A TG+GKTAAF+LP+L
Sbjct: 2 SSFADLNLHERLIRALDELDITTPTPVQTAAIPDALAGHDLRVVARTGSGKTAAFLLPLL 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
+L+ R +TR L+L+PTREL Q + LA++T ++ L GG + KVQ + +R
Sbjct: 62 HQLMQHSRPRTDTRALILLPTRELAQQTLKQVEALARYTFIKAELVTGGEDFKVQAARMR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K P+I+I TPGRL++HL + L D+EVL+LDE+DRMLD F + + C RQ
Sbjct: 122 KNPEILIGTPGRLIEHL-EAGNLRLQDLEVLILDESDRMLDMGFGDDVLRLAGECREARQ 180
Query: 271 TMLFSAT-MTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNI 318
T+LFSAT +A+ +V L +P + +D+ ++ + Q+ ++ N+
Sbjct: 181 TLLFSATGGGNAMQKMVESVLRQPKSLILDSVRDLNEAVVQQIITADNV 229
>gi|336171342|ref|YP_004578480.1| DEAD/DEAH box helicase [Lacinutrix sp. 5H-3-7-4]
gi|334725914|gb|AEH00052.1| DEAD/DEAH box helicase domain protein [Lacinutrix sp. 5H-3-7-4]
Length = 411
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 132/223 (59%), Gaps = 6/223 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
SF + L+RPLL+AI Y PT IQ TIP+ L +D+ A TGTGKTAAF LPIL+
Sbjct: 2 SFKDLKLNRPLLRAIAEKGYDNPTLIQERTIPLVLNKKDVIASAQTGTGKTAAFALPILQ 61
Query: 152 RLLYKPRD----DQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQES 207
LLY +D + R L++ PTREL +Q+ + + +T++ + GG ++ Q+
Sbjct: 62 -LLYDKQDAAKNQKKVRALIISPTRELAIQIQENFQDYLIYTNLRSTVIFGGASIEPQKD 120
Query: 208 VLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSR 267
VLRK DI+IATPGRLLD LH +L +E LVLDEAD MLD F +K+I RLC
Sbjct: 121 VLRKGVDILIATPGRLLD-LHKQDEVNLDYVETLVLDEADLMLDMGFIDDVKKIERLCPA 179
Query: 268 TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+Q +LFSATM V L L P RV V N + N+ Q
Sbjct: 180 EKQILLFSATMPYKVEQLAKTILNNPKRVEVSQNSSTSTNINQ 222
>gi|221199585|ref|ZP_03572629.1| dead/deah box helicase [Burkholderia multivorans CGD2M]
gi|221205515|ref|ZP_03578530.1| dead/deah box helicase [Burkholderia multivorans CGD2]
gi|221174353|gb|EEE06785.1| dead/deah box helicase [Burkholderia multivorans CGD2]
gi|221180870|gb|EEE13273.1| dead/deah box helicase [Burkholderia multivorans CGD2M]
Length = 487
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 DATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV A+ T + A+ GG+++
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 189 LPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
>gi|346974113|gb|EGY17565.1| ATP-dependent RNA helicase HAS1 [Verticillium dahliae VdLs.17]
Length = 587
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 141/236 (59%), Gaps = 10/236 (4%)
Query: 85 PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
P EE F Q+NLS +KAI + + T IQ IP L GRD+ G A TG+GKT A
Sbjct: 104 PSGEEAQDFSQLNLSEKTMKAIEGMGFTKMTEIQRRGIPPLLTGRDVLGAAKTGSGKTLA 163
Query: 145 FMLPILE---RLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
F++P +E L +KPR+ T V+V+ PTREL +Q++ V R+L + S + +GG
Sbjct: 164 FLIPAIEMLSSLRFKPRN--GTGVIVVSPTRELALQIFGVARELMEHHSQTYGIVIGGAN 221
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
+ + L K +++IATPGRLLDHL NTP F +++ L++DEADR+L+ F +M++I
Sbjct: 222 RRAEAEKLAKGVNLIIATPGRLLDHLQNTP-FVFKNLKTLIIDEADRILEIGFEDEMRQI 280
Query: 262 IR-LCSRTRQTMLFSATMTDAVNDLVSVSL-TRPVRVFVDNN--HEVALNLRQEFV 313
++ L S RQT LFSAT T V DL +SL P+ + VD H L Q +V
Sbjct: 281 VKILPSADRQTSLFSATQTTKVEDLARISLRAGPLYINVDQTKEHSTVEGLEQGYV 336
>gi|322698059|gb|EFY89832.1| ATP-dependent RNA helicase HAS1 [Metarhizium acridum CQMa 102]
Length = 581
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 140/223 (62%), Gaps = 8/223 (3%)
Query: 85 PPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAA 144
PP E+ F Q+ LS +KAI + + T IQ IP L G+D+ G A TG+GKT A
Sbjct: 98 PPTAESDMFDQLKLSEKTMKAINEMGFTKMTAIQRTAIPPLLAGKDVLGAAKTGSGKTLA 157
Query: 145 FMLP---ILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLE 201
F++P IL L +KPR+ T V+V+ PTREL +Q++ V R+L Q S + +GG
Sbjct: 158 FLIPAIEILSALRFKPRN--GTGVIVVSPTRELALQIFGVARELMQHHSQTYGIVIGGAN 215
Query: 202 VKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEI 261
K + L K +++IATPGRLLDHL NTP F +++ LV+DEADR+L+ F ++++I
Sbjct: 216 RKAEAEKLSKGVNLLIATPGRLLDHLLNTP-FVFKNLKSLVIDEADRILEVGFEDEIRQI 274
Query: 262 IRLCSR-TRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHE 303
+++ S RQTMLFSAT T V DL +SL RP ++++ + E
Sbjct: 275 VKVLSNDDRQTMLFSATQTTKVEDLARISL-RPGPLYINVDEE 316
>gi|408355702|ref|YP_006844233.1| ATP-dependent RNA helicase [Amphibacillus xylanus NBRC 15112]
gi|407726473|dbj|BAM46471.1| ATP-dependent RNA helicase [Amphibacillus xylanus NBRC 15112]
Length = 483
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F ++N+S P+LKA+ + + TPIQ TIP+ L G D+ G A TGTGKTAAF +P++
Sbjct: 2 TTFQELNISAPILKALSNMGFEEATPIQEQTIPLGLKGEDVIGQAQTGTGKTAAFGIPMI 61
Query: 151 ERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
E++ K R Q LV+ PTREL +QV + ++ +F + GG +++ Q L+
Sbjct: 62 EQIEKKQRKIQG---LVVAPTRELAIQVSEEIHRIGKFKGIRSLPIYGGQQMQRQIRSLK 118
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
+ P IV+ATPGRLLDH+ + ++SD++ +VLDEAD ML+ F ++EI+++ RQ
Sbjct: 119 EGPHIVVATPGRLLDHMRRK-TINISDVKTIVLDEADEMLNMGFIDDIREILKMIPHERQ 177
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
T+LFSATM + + S + P V V + N+ Q F+
Sbjct: 178 TLLFSATMPKEIRQIASTMMREPKEVKVKSKQLSVENIEQRFI 220
>gi|395003518|ref|ZP_10387653.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
gi|394318531|gb|EJE54950.1| DNA/RNA helicase, superfamily II [Acidovorax sp. CF316]
Length = 499
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 147/251 (58%), Gaps = 7/251 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
SSF ++L+ PL +A+ + Y TPIQA IPV L G+D+ G A TGTGKTAAF LP+
Sbjct: 2 TSSFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLPL 61
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
L+RLL + R LVL+PTREL QV Q A++T + + GG+++K
Sbjct: 62 LQRLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMKP 121
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q L+K ++++ATPGRLLDH+ + L+ +E +VLDEADRMLD F ++ I+
Sbjct: 122 QTIELKKGVEVLVATPGRLLDHIEAKNAV-LNQVEYVVLDEADRMLDIGFLPDLQRILSY 180
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVR-L 323
+ R T+LFSAT + + L L P+ + V +E A + Q F S ++ D+ R +
Sbjct: 181 LPKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARPNETASTVEQRFYSANDDDKRRAI 240
Query: 324 YNVLGLMLLRE 334
+ VL L++
Sbjct: 241 HQVLKTRGLKQ 251
>gi|354497513|ref|XP_003510864.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Cricetulus
griseus]
Length = 875
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 138/227 (60%), Gaps = 4/227 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K I Y PTPIQ TIPV L G+D+ A TG+GKTA F+L
Sbjct: 92 KKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLL 151
Query: 148 PILERLLYKPRDDQ-NTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
P+ ERL K R Q R L+L PTREL +Q + T++L +FT ++ AL +GG +++ Q
Sbjct: 152 PMFERL--KARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQF 209
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
+ L + PDI+IATPGRL+ H+ + L +E +V DEADR+ + FA Q++EII
Sbjct: 210 AALHENPDIIIATPGRLM-HVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLP 268
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
QT+LFSAT+ + + LT PV + +D + ++ L+ F+
Sbjct: 269 GGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFL 315
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 135/224 (60%), Gaps = 6/224 (2%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
+F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI++
Sbjct: 12 TFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 152 RLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
RLL + + R L+L PTREL QV + A+ T++ A+ GG+++ Q
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMNPQS 131
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 132 DQLRRGVEILIATPGRLLDHVQQK-TANLGQVQMLVLDEADRMLDMGFLPDLQRILNLLP 190
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L + L P + V ++ A N+ Q
Sbjct: 191 KERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQ 234
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 140/238 (58%), Gaps = 3/238 (1%)
Query: 76 GGKEFFEDAPPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCA 135
GG + DA ++F ++ + L +A L + P+ IQ IP L G+D+ G A
Sbjct: 2 GGPDKLTDAERAAAIAAFEKLGICTQLAEAAAGLGWKAPSHIQEQAIPHLLAGQDVIGLA 61
Query: 136 ATGTGKTAAFMLPILERLLYKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVAL 195
TG+GKT AF LPIL+ L+ KP Q L+L PTREL +Q+ + L V+ +
Sbjct: 62 QTGSGKTGAFSLPILQALMDKP---QEHFALILSPTRELAIQIAEQVEALGSGIGVKSCV 118
Query: 196 SVGGLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFA 255
VGG+++ Q L K P +++ TPGR++DHL NT FSL ++ LVLDEAD++LD F
Sbjct: 119 LVGGIDMMAQAIALAKRPHVLVGTPGRVVDHLSNTKGFSLKQLKHLVLDEADKLLDMDFE 178
Query: 256 SQMKEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFV 313
++ +I+++ R R+T LFSATMT+ V L L +PV++ V + + LRQ++V
Sbjct: 179 QEIDQILKVIPRERRTQLFSATMTNKVQKLQRACLDKPVKIEVAHKYSTVDTLRQQYV 236
>gi|221211662|ref|ZP_03584641.1| ATP-dependent RNA helicase RhlE [Burkholderia multivorans CGD1]
gi|221169023|gb|EEE01491.1| ATP-dependent RNA helicase RhlE [Burkholderia multivorans CGD1]
Length = 495
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 DATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV A+ T + A+ GG+++
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 189 LPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
>gi|167569331|ref|ZP_02362205.1| ATP-dependent RNA helicase RhlE [Burkholderia oklahomensis C6786]
Length = 411
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 139/232 (59%), Gaps = 8/232 (3%)
Query: 84 APPVEENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTA 143
A PV +++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA
Sbjct: 6 ATPV--DATFDQFGLAAEILKAIADQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTA 63
Query: 144 AFMLPILERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVG 198
+F LPI++RLL + + R L+L PTREL QV A+ T + A+ G
Sbjct: 64 SFSLPIIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 123
Query: 199 GLEVKVQESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQM 258
G+++ Q + LR+ +++IATPGRLLDH+ + +L +++LVLDEADRMLD F +
Sbjct: 124 GVDMNPQMAELRRGVEVLIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDL 182
Query: 259 KEIIRLCSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ I+ L + RQT+LFSAT + + L S L P + V ++ A N+ Q
Sbjct: 183 QRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNATATNVTQ 234
>gi|444426590|ref|ZP_21222002.1| hypothetical protein B878_11633 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444240160|gb|ELU51707.1| hypothetical protein B878_11633 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 521
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 130/220 (59%), Gaps = 2/220 (0%)
Query: 92 SFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPILE 151
F + LS P+LKAI Y P+PIQA IP L G+D+ A TGTGKTA F LPILE
Sbjct: 2 GFTSLGLSAPILKAIQEKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPILE 61
Query: 152 RLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVLR 210
RL PR N R LVL PTREL QV + ++ + A+ GG+++ Q LR
Sbjct: 62 RLSNGPRVRSNHIRALVLTPTRELAAQVQENVFMYSRHLPLTSAVVFGGVKINPQMLRLR 121
Query: 211 KCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTRQ 270
K D+++ATPGRL+D L+N + +E+LVLDEADRMLD F +++I+ L + RQ
Sbjct: 122 KGADVLVATPGRLMD-LYNQNAVKFDQLEMLVLDEADRMLDMGFIRDIRKILELLPKQRQ 180
Query: 271 TMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+LFSAT ++ + DL + PV + V+ + A + Q
Sbjct: 181 NLLFSATFSNEIRDLAKGLVNNPVEISVNPANSTARTVEQ 220
>gi|384252494|gb|EIE25970.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 806
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 141/232 (60%), Gaps = 3/232 (1%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
SF + LS +++ I Y PTPIQ T+P+AL G+D+ G A TG+GKTAAF++P+L
Sbjct: 44 GSFETLGLSPVIIRGIKRKGYQLPTPIQRRTLPLALTGQDVVGMARTGSGKTAAFVIPML 103
Query: 151 ERLL-YKPRDDQNTRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESVL 209
ERL + PR R L+L PTREL +Q+++V ++L+++T + A+ VGG ++ Q + L
Sbjct: 104 ERLREHSPR--AGARALILAPTRELTLQLHKVVKELSRYTDLRTAVLVGGDSMEAQFAEL 161
Query: 210 RKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRTR 269
PDI++ATPGRL+ HL SL ++ V DEAD++ + FA Q++ ++ R
Sbjct: 162 AANPDILLATPGRLMHHLQEVEGMSLQTVQYCVFDEADQLFEMGFAEQLRAVLSKMGDAR 221
Query: 270 QTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEV 321
QT+LFSAT+ A+ + L P V +D + +++ NL+ F D+
Sbjct: 222 QTLLFSATLPAALAEFARAGLKNPAFVRLDADTKLSPNLQLCFACLRQEDKT 273
>gi|332532711|ref|ZP_08408587.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis ANT/505]
gi|332037927|gb|EGI74376.1| ATP-dependent RNA helicase [Pseudoalteromonas haloplanktis ANT/505]
Length = 415
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 144/248 (58%), Gaps = 7/248 (2%)
Query: 91 SSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPIL 150
++F +NL LL AI NY PT IQ TIP L G D+ G A TGTGKTAAF+LP+L
Sbjct: 4 TTFSSLNLDPLLLTAIEQNNYTQPTAIQIKTIPPILAGSDVMGSAQTGTGKTAAFVLPLL 63
Query: 151 ERLLYKPRDDQN--TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQESV 208
+LL P+ D+ RV++L PTREL QV+ + AQ T++ AL+ GG + Q
Sbjct: 64 HKLLNTPKKDEQGLARVVILTPTRELAQQVFASFEKYAQGTNINGALAYGGASIGPQIKA 123
Query: 209 LRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCSRT 268
L K +++ATPGRLLDH+ S LS ++ LV DEADRMLD F +++ I+R
Sbjct: 124 L-KTAQVIVATPGRLLDHIVKG-SVVLSSVDSLVFDEADRMLDMGFIDEIRRILRHIPGD 181
Query: 269 RQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEFVSFSNIDEVRLYNVLG 328
RQT+LFSAT D+V +L L P + VD + A+ + Q + +DE R ++
Sbjct: 182 RQTLLFSATFDDSVFELSKKLLKNPELIEVDKRNSAAVEVEQVIYA---VDEDRKRELVS 238
Query: 329 LMLLRENC 336
M+ +N
Sbjct: 239 HMIGMKNW 246
>gi|432094964|gb|ELK26372.1| ATP-dependent RNA helicase DDX54 [Myotis davidii]
Length = 829
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 138/226 (61%), Gaps = 4/226 (1%)
Query: 88 EENSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFML 147
+++ F M LS P+ K I Y PTPIQ TIPV L G+D+ A TG+GKTA F++
Sbjct: 44 KKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDMVAMARTGSGKTACFLI 103
Query: 148 PILERLLYKPRDDQN-TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKVQE 206
P+ ERL K R Q+ R L+L PTREL +Q + T++L +FT ++ AL +GG +++ Q
Sbjct: 104 PMFERL--KARSAQSGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQF 161
Query: 207 SVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRLCS 266
S L + PDI+IATPGRL+ H+ + L +E +V DEADR+ + FA Q++EII
Sbjct: 162 SALHENPDIIIATPGRLM-HVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIISRLP 220
Query: 267 RTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQEF 312
QT+LFSAT+ + + LT PV + +D + ++ L+ F
Sbjct: 221 GGHQTLLFSATLPKMLVEFARAGLTEPVLIRLDVDAKLNEQLKTSF 266
>gi|421477961|ref|ZP_15925746.1| DEAD/DEAH box helicase [Burkholderia multivorans CF2]
gi|400225606|gb|EJO55753.1| DEAD/DEAH box helicase [Burkholderia multivorans CF2]
Length = 487
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%)
Query: 90 NSSFHQMNLSRPLLKAIGALNYIYPTPIQAATIPVALLGRDICGCAATGTGKTAAFMLPI 149
+++F Q L+ +LKAI Y PTPIQA IPV L GRD+ G A TGTGKTA+F LPI
Sbjct: 10 DATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 150 LERLLYKPRDDQN-----TRVLVLVPTRELGVQVYQVTRQLAQFTSVEVALSVGGLEVKV 204
++RLL + + R L+L PTREL QV A+ T + A+ GG+++
Sbjct: 70 IQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNP 129
Query: 205 QESVLRKCPDIVIATPGRLLDHLHNTPSFSLSDIEVLVLDEADRMLDEHFASQMKEIIRL 264
Q + LR+ +I+IATPGRLLDH+ + +L +++LVLDEADRMLD F ++ I+ L
Sbjct: 130 QMAELRRGVEILIATPGRLLDHVQQK-TANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188
Query: 265 CSRTRQTMLFSATMTDAVNDLVSVSLTRPVRVFVDNNHEVALNLRQ 310
+ RQT+LFSAT + + L S L P + V ++ N+ Q
Sbjct: 189 LPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQ 234
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,110,445,374
Number of Sequences: 23463169
Number of extensions: 214707824
Number of successful extensions: 1891296
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 25290
Number of HSP's successfully gapped in prelim test: 7451
Number of HSP's that attempted gapping in prelim test: 1689093
Number of HSP's gapped (non-prelim): 108784
length of query: 337
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 194
effective length of database: 9,003,962,200
effective search space: 1746768666800
effective search space used: 1746768666800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)