BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3145
(396 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27
PE=2 SV=1
Length = 765
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 177/244 (72%), Gaps = 17/244 (6%)
Query: 131 FRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQ 190
RIR + DR+A++AAL+ RTF DH M+F TK++AH MHILLGL+G++ GELHGNL+Q
Sbjct: 409 IRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQ 468
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
RLE+LR+FKDE+ D+L+ATDVAARGLDI GVKTVIN+ MP++++HY+HRVGRTARAG+
Sbjct: 469 TQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGR 528
Query: 251 GGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKV 310
G SVS+ GE +RK++K+++K AK PVK RI+P +++ K+R K+
Sbjct: 529 AGRSVSLVGEEERKMLKEIVKAAKAPVKARILP----------------QDVILKFRDKI 572
Query: 311 EAIEGEVQKILTEEKHDRLLNKADEQVSKAEKML-KEKKPLHENPPREWFQTKKERAAIK 369
E +E +V +L E ++ + K++ Q++ A+++L K K+ + P R WFQTK+ER K
Sbjct: 573 EKMEKDVYAVLQLEAEEKEMQKSEAQINTAQRLLEKGKEAPNPEPERSWFQTKEERKKEK 632
Query: 370 TSQA 373
++A
Sbjct: 633 IAKA 636
>sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 OS=Homo sapiens GN=DDX27
PE=1 SV=2
Length = 796
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 178/244 (72%), Gaps = 17/244 (6%)
Query: 131 FRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQ 190
RIR + DR+A++AAL+ RTF DH M+F TK++AH MHILLGL+G++ GELHGNL+Q
Sbjct: 440 IRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQ 499
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
RLE+LR+FKDE+ D+L+ATDVAARGLDI GVKTVIN+ MP++++HY+HRVGRTARAG+
Sbjct: 500 TQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGR 559
Query: 251 GGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKV 310
G SVS+ GE +RK++K+++K AK PVK RI+P +++ K+R K+
Sbjct: 560 AGRSVSLVGEDERKMLKEIVKAAKAPVKARILP----------------QDVILKFRDKI 603
Query: 311 EAIEGEVQKILTEEKHDRLLNKADEQVSKAEKML-KEKKPLHENPPREWFQTKKERAAIK 369
E +E +V +L E ++ + +++ Q++ A+++L K K+ + + P R WFQTK+ER K
Sbjct: 604 EKMEKDVYAVLQLEAEEKEMQQSEAQINTAKRLLEKGKEAVVQEPERSWFQTKEERKKEK 663
Query: 370 TSQA 373
++A
Sbjct: 664 IAKA 667
>sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus GN=Ddx27
PE=1 SV=3
Length = 760
Score = 238 bits (606), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/244 (50%), Positives = 176/244 (72%), Gaps = 17/244 (6%)
Query: 131 FRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQ 190
RIR + DR+A++AAL+ RTF DH M+F TK++AH MHILLGLLG++ GELHGNL+Q
Sbjct: 406 IRIRPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQ 465
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
RLE+LR+FKDE+ D+L+ATDVAARGLDI GVKTVIN+ MP++++HY+HRVGRTARAG+
Sbjct: 466 TQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGR 525
Query: 251 GGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKV 310
G SVS+ GE +RK++K+++K AK PVK RI+P +++ K+R K+
Sbjct: 526 AGRSVSLVGEEERKMLKEIVKAAKAPVKARILP----------------QDVILKFRDKI 569
Query: 311 EAIEGEVQKILTEEKHDRLLNKADEQVSKAEKML-KEKKPLHENPPREWFQTKKERAAIK 369
E +E +V +L E ++ + +++ Q+ A+++L K K+ + P R WFQTK+ER K
Sbjct: 570 EKLEKDVYAVLQLEAEEKEMQQSEAQIDTAQRLLAKGKETADQEPERSWFQTKEERKKEK 629
Query: 370 TSQA 373
++A
Sbjct: 630 IAKA 633
>sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp.
japonica GN=Os12g0481100 PE=2 SV=2
Length = 802
Score = 203 bits (517), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 162/273 (59%), Gaps = 21/273 (7%)
Query: 120 LRPPVLLCLLCFRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGI 179
L+ P L RIR+ +++A+L AL +TFKD +IF TK AH + I+ GL G+
Sbjct: 405 LKRPATLTEEVVRIRRAREANQEAVLLALCLKTFKDKVIIFSGTKHSAHRLKIIFGLSGM 464
Query: 180 KAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYI 239
KA ELHGNLTQ RLE+L FK +E D LIATDVAARG+DI GV+TVIN+ P Y+
Sbjct: 465 KAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYL 524
Query: 240 HRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPL 299
HRVGRTARAG+ G +V+ + DR L+K + K A + +K RI+ P+
Sbjct: 525 HRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKAGSQLKSRIV------------AEKPV 572
Query: 300 AEIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWF 359
AE +E +E ++ I+ EE+ +R+L KA+ + +KAE M+ K ++ P R WF
Sbjct: 573 AECAK----LIEELEDQISTIIQEEREERILRKAEMEATKAENMIAHKDEIYSRPKRTWF 628
Query: 360 QTKKE-----RAAIKTSQAGEGLAALILYLQSH 387
T+KE +AA +++ G+ + +I Q+
Sbjct: 629 ATEKEKKLLAKAAKESTSQGKSNSGVISAQQAE 661
>sp|Q4P9P3|DRS1_USTMA ATP-dependent RNA helicase DRS1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DRS1 PE=3 SV=1
Length = 932
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 153/243 (62%), Gaps = 18/243 (7%)
Query: 134 RKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSR 193
RK R ALL +L RTF TMIFV +K+ AH++ I+ GLLG+ AGELHG+L+Q R
Sbjct: 591 RKSEDAQRPALLLSLCTRTFTSQTMIFVRSKKLAHQLKIVFGLLGLSAGELHGDLSQEQR 650
Query: 194 LESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGV 253
+++L F+D +TD L+ATD+A+RGLDI+GV+TVINY MP E Y+HRVGRTARAG+ G
Sbjct: 651 IDALTDFRDGKTDFLLATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGR 710
Query: 254 SVSMAGEVDRKLVKQVI-KNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEA 312
+V++ GE DR+++K I K++ +KHRII PS + E +++ + +V+A
Sbjct: 711 AVTLVGEADRRMLKLAIKKSSAEQIKHRII---------PSAVAAHMCETLERLKPEVDA 761
Query: 313 IEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERA-AIKTS 371
+L EEK ++ L A+ ++ K E M + P R WFQ+ E+ A S
Sbjct: 762 -------VLREEKEEKALRIAEMELKKGENMANHADEIFSRPKRTWFQSGSEKTQASALS 814
Query: 372 QAG 374
+AG
Sbjct: 815 KAG 817
>sp|Q9ZRZ8|RH28_ARATH DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana
GN=RH28 PE=2 SV=1
Length = 789
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 155/252 (61%), Gaps = 17/252 (6%)
Query: 121 RPPVLLCLLCFRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIK 180
RPP L + RIR+ +++A+L +L RTFK +IF TK+ AH + IL GL G+K
Sbjct: 380 RPPGLTEEVV-RIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLK 438
Query: 181 AGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIH 240
A ELHGNLTQ RL+SL F+ +E D LIATDVAARGLDI GV+TVINY P ++ Y+H
Sbjct: 439 AAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVH 498
Query: 241 RVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLA 300
RVGRTARAG+ G +V+ + DR L+K + K + +K R+IP
Sbjct: 499 RVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIP----------------E 542
Query: 301 EIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQ 360
+ + K+ ++ +E + +++ E+ +R L KA+ + +KAE ML+ + ++ P R WF
Sbjct: 543 QSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHRDEIYARPKRTWFM 602
Query: 361 TKKERAAIKTSQ 372
T+KE+ + ++
Sbjct: 603 TEKEKKLVAQAE 614
>sp|P0CQ92|DRS1_CRYNJ ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DRS1 PE=3 SV=1
Length = 808
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 153/241 (63%), Gaps = 19/241 (7%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
RIR D R L AL RT ++ +IF +K AH+M I+ GL G+KA ELHGNLTQ
Sbjct: 449 RIRSDDS--RSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLTQE 506
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
RL++L FK D L+ATD+A+RGLDI+GV+TVINY MP L Y HRVGRTARAG+
Sbjct: 507 QRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTARAGRK 566
Query: 252 GVSVSMAGEVDRKLVKQVIKNAK-NPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKV 310
G SVS+ GE DRK++K IK A+ + V+HRIIP +E V + K+
Sbjct: 567 GRSVSLVGEADRKMLKAAIKQAEADQVRHRIIP----------------SEAVTAMKEKL 610
Query: 311 EAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAIKT 370
E + ++Q+IL EEK ++LL +AD ++ K + M++ + + P R WFQ+ KE+ A K+
Sbjct: 611 EEFKDDIQEILKEEKEEKLLRQADMEIKKGQNMVEHEAEIFSRPARTWFQSGKEKQASKS 670
Query: 371 S 371
+
Sbjct: 671 A 671
>sp|P0CQ93|DRS1_CRYNB ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DRS1 PE=3 SV=1
Length = 808
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 153/241 (63%), Gaps = 19/241 (7%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
RIR D R L AL RT ++ +IF +K AH+M I+ GL G+KA ELHGNLTQ
Sbjct: 449 RIRSDDS--RSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLTQE 506
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
RL++L FK D L+ATD+A+RGLDI+GV+TVINY MP L Y HRVGRTARAG+
Sbjct: 507 QRLQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTARAGRK 566
Query: 252 GVSVSMAGEVDRKLVKQVIKNAK-NPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKV 310
G SVS+ GE DRK++K IK A+ + V+HRIIP +E V + K+
Sbjct: 567 GRSVSLVGEADRKMLKAAIKQAEADQVRHRIIP----------------SEAVTAMKEKL 610
Query: 311 EAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAIKT 370
E + ++Q+IL EEK ++LL +AD ++ K + M++ + + P R WFQ+ KE+ A K+
Sbjct: 611 EEFKDDIQEILKEEKEEKLLRQADMEIKKGQNMVEHEAEIFSRPARTWFQSGKEKQASKS 670
Query: 371 S 371
+
Sbjct: 671 A 671
>sp|A4QYM6|DRS1_MAGO7 ATP-dependent RNA helicase DRS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DRS1 PE=3 SV=1
Length = 790
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 150/260 (57%), Gaps = 23/260 (8%)
Query: 124 VLLCLLCFRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGE 183
V L R+R R L L + + +IF K+ AH I+ GLLG+ E
Sbjct: 470 VTLTQEFVRLRPGREEKRMGYLVYLCKNLYTERVIIFFRQKKIAHHARIIFGLLGLSCAE 529
Query: 184 LHGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVG 243
LHG+++Q R++S+ F+D + L+ATD+A+RGLDI+GV TVINY P SLE Y+HRVG
Sbjct: 530 LHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVG 589
Query: 244 RTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLA 300
RTARAG+ G ++++A E DRK+VK +K K + RII A
Sbjct: 590 RTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISSRIID----------------A 633
Query: 301 EIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQ 360
D ++AK++ +E EV+ ++ EEK +++L +AD ++ K E M++ + + P R WF+
Sbjct: 634 ADADSWQAKIDELEDEVEAVMREEKEEKVLAQADMEMRKGENMIRYEDDIKARPKRTWFE 693
Query: 361 TKKERAAIKTSQAGEGLAAL 380
T+K++ A + + G AAL
Sbjct: 694 TEKDKKAAREA----GRAAL 709
>sp|A1D1R8|DRS1_NEOFI ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=drs1
PE=3 SV=1
Length = 819
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 148/247 (59%), Gaps = 19/247 (7%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
R+R R L L + ++F KREAH + I+ GLLG+KA ELHG+++Q
Sbjct: 522 RLRPGREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQE 581
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
R++S+ F++ + L+ATD+A+RGLDI+GV+TVINY P S E Y+HRVGRTARAG+
Sbjct: 582 QRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRS 641
Query: 252 GVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G + ++A E DRK+VK +K K + R++ P + D++ A
Sbjct: 642 GRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVVDPA----------------VADEWAA 685
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAI 368
K + +E E++++L EEK ++ + +A+ QV+K E M+K + + P R WF+T++++ A
Sbjct: 686 KAKGLEDEIEEVLQEEKLEKQMAQAEMQVTKGENMIKHEAEIMSRPKRTWFETERDKRAA 745
Query: 369 KTSQAGE 375
+ A E
Sbjct: 746 RKLGATE 752
>sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=drs1 PE=3 SV=1
Length = 754
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 150/249 (60%), Gaps = 13/249 (5%)
Query: 125 LLCLLCFRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGEL 184
LL R+R L R A+L L F T+IF +K AH+M ++ GLL + A E+
Sbjct: 475 LLTQEFVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEI 534
Query: 185 HGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGR 244
HG+L+Q R+ +L F+D + + L+ATDVA+RG+DI+G++ VINY P + E Y+HRVGR
Sbjct: 535 HGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGR 594
Query: 245 TARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVD 304
TARAG+ G ++++AGE DRK++K V KN+ + +++ K V+
Sbjct: 595 TARAGRSGRAITLAGEGDRKVLKGVFKNS-SAQNTKLVNRNLDFNK------------VE 641
Query: 305 KYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKE 364
K+ ++E +E VQK+L EEK +R L A+ + K E ++K + P R WFQ++K+
Sbjct: 642 KFGKEIEELEPVVQKVLDEEKQERELKIAERDLKKGENIMKYGDEIRSRPARTWFQSEKD 701
Query: 365 RAAIKTSQA 373
+ A K S+A
Sbjct: 702 KQASKASEA 710
>sp|Q4WRV2|DRS1_ASPFU ATP-dependent RNA helicase drs1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=drs1
PE=3 SV=1
Length = 830
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 148/247 (59%), Gaps = 19/247 (7%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
R+R R L L + ++F KREAH + I+ GLLG+KA ELHG+++Q
Sbjct: 533 RLRPGREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQE 592
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
R++S+ F++ + L+ATD+A+RGLDI+GV+TVINY P S E Y+HRVGRTARAG+
Sbjct: 593 QRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRS 652
Query: 252 GVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G + ++A E DRK+VK +K K + R++ P + D++ A
Sbjct: 653 GRACTIAAEPDRKIVKSAVKAGKAQGAKIVSRVVDPA----------------VADEWAA 696
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAI 368
K + +E E++++L EEK ++ + +A+ QV+K E ++K + + P R WF+T++++ A
Sbjct: 697 KAKGLEDEIEEVLQEEKLEKQMAQAEMQVTKGENLIKHEAEIMSRPKRTWFETERDKRAA 756
Query: 369 KTSQAGE 375
+ A E
Sbjct: 757 RKLGATE 763
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 144/229 (62%), Gaps = 19/229 (8%)
Query: 138 HL-DRKALLAALVCRTF-KDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLE 195
HL DR A+L +L R F + T+IF +K+E H + I+ GL +KA ELHGNL+Q R +
Sbjct: 418 HLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFD 477
Query: 196 SLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSV 255
SL++F+D + + L+A+DVA+RGLDI GVKTVINY MP+++ +YIHRVGRTARAG G S
Sbjct: 478 SLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSC 537
Query: 256 SMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEG 315
S + DRKL+K ++ A+N K R + + V+ +R ++E +
Sbjct: 538 SFITDNDRKLLKDIVTKARNKAKSRSVS----------------QDNVNFWRNRIEELTE 581
Query: 316 EVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKE 364
+++ I+ EE + L KA++ + KAEK++ E P+ W++TK+E
Sbjct: 582 DIKSIVREEMKEADLRKAEKTLDKAEKIISNADANVET-PKVWYKTKQE 629
>sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=drs1 PE=3 SV=2
Length = 820
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 144/247 (58%), Gaps = 19/247 (7%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
R+R R L L + ++F K+EAH + I GLLG+KA ELHG+++Q
Sbjct: 525 RLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIAFGLLGLKAAELHGSMSQE 584
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
R+ S+ F++ + L+ATD+AARGLDI+GV+TVINY P S E Y+HRVGRTARAG+
Sbjct: 585 QRIRSVENFREGKVSFLLATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRS 644
Query: 252 GVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G + ++A E DRK+VK +K +K V R++ P + D++
Sbjct: 645 GRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPA----------------VADRWAQ 688
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAI 368
K + +E E+ +L EEK ++ L +A+ QV+++E M+K + + P R WF +++E+
Sbjct: 689 KAKDLEEEINAVLEEEKIEKQLAQAEMQVTRSENMIKHEAEIMSRPKRTWFASEREKILS 748
Query: 369 KTSQAGE 375
K + A E
Sbjct: 749 KKAGAAE 755
>sp|Q1E2B2|DRS1_COCIM ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis (strain RS)
GN=DRS1 PE=3 SV=1
Length = 840
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 140/226 (61%), Gaps = 20/226 (8%)
Query: 148 LVCRT-FKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETD 206
L+C T + + ++F K+EAH I+ GLLG+KA ELHG+++Q R+ ++ F+D +
Sbjct: 557 LLCNTIYTNRVIVFFRQKKEAHRARIIFGLLGLKAAELHGSMSQEQRINAVEAFRDGKVP 616
Query: 207 VLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLV 266
L+ATD+A+RGLDI+GV++VINY P S E Y+HRVGRTARAG+ G + ++A E DRK+V
Sbjct: 617 FLLATDLASRGLDIKGVESVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVV 676
Query: 267 KQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTE 323
K +K + + R++ P + D++ +KVE ++ E++ IL E
Sbjct: 677 KAAVKAGRAQGAKIVSRVVDPA----------------VADEWASKVEEMQAEIEDILKE 720
Query: 324 EKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAIK 369
EK ++ L +A+ QV + + ++K + P R WF+T++E+ K
Sbjct: 721 EKEEKQLAQAEMQVKRGQNLIKHGSEIMARPKRTWFETEREKREAK 766
>sp|A2QAX7|DRS1_ASPNC ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=drs1 PE=3 SV=1
Length = 824
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 147/255 (57%), Gaps = 22/255 (8%)
Query: 124 VLLCLLCFRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGE 183
V L R+R R L L + ++F K+EAH + I+ GLLG+KA E
Sbjct: 524 VTLVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRIIFGLLGLKAAE 583
Query: 184 LHGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVG 243
LHG+++Q +E+ R+ K L+ATD+A+RGLDI+GV+TVINY P S E Y+HRVG
Sbjct: 584 LHGSMSQEQSVENFREGK---AAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVG 640
Query: 244 RTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLA 300
RTARAG+ G + ++A E DRK+VK +K K+ + R+I P
Sbjct: 641 RTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIASRVIEPA--------------- 685
Query: 301 EIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQ 360
+ D + AK E + EV+++L+EEK ++ L +A+ QV+K E ++K + + P R WF+
Sbjct: 686 -VADSWAAKAEELADEVEEVLSEEKLEKQLAQAEMQVTKGENLIKHEAEIKSRPKRTWFE 744
Query: 361 TKKERAAIKTSQAGE 375
T++++ A + A E
Sbjct: 745 TERDKKAARKLGAAE 759
>sp|Q6CEB8|DRS1_YARLI ATP-dependent RNA helicase DRS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DRS1 PE=3 SV=1
Length = 753
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 150/243 (61%), Gaps = 16/243 (6%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDH-TMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQ 190
RIRK HL + ALLA+++ + K+ T+IFV K AH + I+LGLLG++ GELHG L+Q
Sbjct: 476 RIRKRDHL-KPALLASILKKMDKEQRTIIFVARKETAHRLRIMLGLLGVRIGELHGALSQ 534
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
RL+S+ FK E +L+ TD+A+RGLDI ++ V+NY MP + Y+HRVGRTARAG+
Sbjct: 535 EQRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVVNYDMPQTHAVYLHRVGRTARAGR 594
Query: 251 GGVSVSMAGE--VDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G S+++ GE DR +V++ IK+ + + + + +P V+K +
Sbjct: 595 EGRSITLVGEAAADRAIVREAIKSVSESKQGKAVG------RNVDWPE------VEKLYS 642
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAI 368
K+E V +IL EEK ++ + +A+ +V K E +LK +K + P R WFQ +E+ A
Sbjct: 643 KIEEKGDIVNEILAEEKEEKAMLQAEMEVRKGENLLKYEKEIASRPRRTWFQNAQEKKAD 702
Query: 369 KTS 371
+TS
Sbjct: 703 ETS 705
>sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DRS1 PE=1 SV=2
Length = 752
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 15/239 (6%)
Query: 132 RIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNL 188
RIRK HL + ALL L+ + T + ++FV K AH + I++GLLG+ GELHG+L
Sbjct: 455 RIRKRDHL-KPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSL 513
Query: 189 TQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARA 248
TQ RL+S+ KFK+ E VLI TD+A+RGLDI ++ VINY MP S E Y+HRVGRTARA
Sbjct: 514 TQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA 573
Query: 249 GKGGVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKY 306
G+ G SV+ GE DR +V+ IK+ + +++ + G + + +++
Sbjct: 574 GREGRSVTFVGESSQDRSIVRAAIKSVE---ENKSLTQGKALGRNVDWVQ------IEET 624
Query: 307 RAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKER 365
VE++ ++ IL EEK ++ + +A+ Q+ K E MLK KK + P R WFQ++ ++
Sbjct: 625 NKLVESMNDTIEDILVEEKEEKEILRAEMQLRKGENMLKHKKEIQARPRRTWFQSESDK 683
>sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DRS1 PE=3 SV=1
Length = 754
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 15/239 (6%)
Query: 132 RIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNL 188
RIRK HL + ALL L+ + T + ++FV K AH + I++GLLG+ GELHG+L
Sbjct: 457 RIRKRDHL-KPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSL 515
Query: 189 TQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARA 248
TQ RL+S+ KFK+ E VLI TD+A+RGLDI ++ VINY MP S E Y+HRVGRTARA
Sbjct: 516 TQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA 575
Query: 249 GKGGVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKY 306
G+ G SV+ GE DR +V+ IK+ + +++ + G + + +++
Sbjct: 576 GREGRSVTFVGESSQDRSIVRAAIKSVE---ENKSLTQGKALGRNVDWVQ------IEET 626
Query: 307 RAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKER 365
VE++ ++ IL EEK ++ + +A+ Q+ K E MLK KK + P R WFQ++ ++
Sbjct: 627 NKLVESMNDTIEDILVEEKEEKEILRAEMQLRKGENMLKHKKEIQARPRRTWFQSESDK 685
>sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DRS1 PE=3 SV=1
Length = 808
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 36/294 (12%)
Query: 94 TEIVVAYCWSKGTFQSNASMTSFL-----FLLRPPVLLCLLC------------FRIRKD 136
EI+ S+ T +A+MTS + + PV L + R+R+
Sbjct: 453 NEILTTIPKSRQTMLFSATMTSTVDKLIRIGMDKPVRLMVDAKKHTVKGLTQEFIRLRQG 512
Query: 137 THLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLES 196
R A L + + + + +IF K+EAH + ++ L G+KA ELHGN++Q R+++
Sbjct: 513 KEDKRLAYLMYICEKIYTERVIIFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQA 572
Query: 197 LRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVS 256
+ F+ ++ L+ATDVA+RGLDI+ V TVINY P S E Y+HRVGRTARAG+ G + +
Sbjct: 573 VEAFRSGKSSYLLATDVASRGLDIKNVSTVINYEAPQSHEIYLHRVGRTARAGRSGRACT 632
Query: 257 MAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAI 313
+A E DRK+VKQ +K +++ V R +P E D++ K+ +
Sbjct: 633 LAAEPDRKVVKQAVKQSRDQGSKVVSRQVP----------------VEETDRWMEKLRGL 676
Query: 314 EGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAA 367
E E++ +L EEK +R L+ + + + +++ + + P R WF+T+KE+ A
Sbjct: 677 EDEIEDVLKEEKEERTLSITERDLKRGMNLIEHEAEIKSRPKRVWFETEKEKMA 730
>sp|A7TJM9|DRS1_VANPO ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1
Length = 752
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 150/262 (57%), Gaps = 23/262 (8%)
Query: 118 FLLRPP----VLLCLLCFRIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEM 170
++ PP L RIRK HL + ALL L+ + T + ++FV K AH++
Sbjct: 437 IMINPPKQAAARLTQEFVRIRKRDHL-KPALLFYLIRKLDGTGQKRIVVFVARKEMAHKL 495
Query: 171 HILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYR 230
I+LGLLG+K GELHG+LTQ RL+S+ FK E VLI TD+A+RGLDI ++ VIN+
Sbjct: 496 RIILGLLGMKVGELHGSLTQEQRLQSVNNFKSLEVPVLICTDLASRGLDIPKIEVVINFD 555
Query: 231 MPHSLEHYIHRVGRTARAGKGGVSVSMAGEV--DRKLVKQVIKNA-KNPVKHRIIPPGYP 287
MP S E Y+HRVGRTARAG+ G SV+ GE DR +V+ IK+ ++ K++ +
Sbjct: 556 MPKSYEIYLHRVGRTARAGREGRSVTFVGESSQDRSIVRSAIKSVEESSSKNKAVSRNVE 615
Query: 288 RLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEK 347
+ +++ VE+ + IL EEK ++ + +A+ Q+ K E M+K K
Sbjct: 616 WTQ------------IEETNKLVESFGETIDDILVEEKQEKEILRAEMQLRKGENMIKHK 663
Query: 348 KPLHENPPREWFQTKKERAAIK 369
K + P R WFQ++ E+ K
Sbjct: 664 KEIQSRPKRTWFQSEAEKKNAK 685
>sp|Q0CZN5|DRS1_ASPTN ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=drs1 PE=3 SV=1
Length = 821
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 146/246 (59%), Gaps = 20/246 (8%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
R+R R L L + ++F KREAH + I+ GLLG+KA ELHG+++Q
Sbjct: 527 RLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQE 586
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
R++S+ F+D + L+ATD+A+RGLDI+GV+TVINY P S E Y+HRVGRTARAG+
Sbjct: 587 QRIKSVENFRDGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRS 646
Query: 252 GVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G + ++A E DRK+VK +K +K V R++ P + D++
Sbjct: 647 GRACTIAAEPDRKVVKAAVKASKAQGAKVASRVVDPA----------------VADQWAK 690
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKE-RAA 367
K +E E+ ++L EEK ++ L +A+ QV+K E ++K + + P R WF+++K+ RAA
Sbjct: 691 KAADLEEEINEVLEEEKTEKQLAQAEMQVTKGENLIKHEAEIMSRPKRTWFESEKDKRAA 750
Query: 368 IKTSQA 373
K A
Sbjct: 751 RKLGAA 756
>sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DRS1 PE=3 SV=1
Length = 725
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 141/237 (59%), Gaps = 12/237 (5%)
Query: 132 RIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNL 188
RIRK HL + +LL L+ + + ++FV K AH++ I+LGLLG+ ELHG+L
Sbjct: 430 RIRKRDHL-KPSLLFNLIRKLDPNGQKRIVVFVARKDMAHKLRIILGLLGMAVAELHGSL 488
Query: 189 TQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARA 248
TQ RL+S+ KFK + VLI TD+A+RGLDI ++ VINY MP S E Y+HRVGRTARA
Sbjct: 489 TQEQRLDSVNKFKSLQVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA 548
Query: 249 GKGGVSVSMAGEVDRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G+ G S++ GE + + ++K+A V IP + + V++
Sbjct: 549 GREGRSITFVGEASAE--RSIVKDAIRGVNDSEIPGSKAVGRNVDWNQ------VEETNK 600
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKER 365
VE ++ VQ IL EEK ++ + +A+ ++ K E +LK K + P R WFQ++KE+
Sbjct: 601 IVENMDQTVQDILVEEKEEKEILRAEMELKKGENLLKHKDEIQSRPKRTWFQSEKEK 657
>sp|Q75F95|DRS1_ASHGO ATP-dependent RNA helicase DRS1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DRS1
PE=3 SV=1
Length = 734
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 146/247 (59%), Gaps = 17/247 (6%)
Query: 132 RIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNL 188
R+RK HL + ALL L+ + T + ++FV K AH + ++LGLLG+KAGELHG+L
Sbjct: 443 RLRKREHL-KPALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLGMKAGELHGSL 501
Query: 189 TQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARA 248
TQ RL+S+ FK + VL+ TD+A+RGLDI ++ VINY MP + E Y+HRVGRTARA
Sbjct: 502 TQEQRLQSVNNFKSLDVPVLVCTDLASRGLDIPKIEVVINYDMPKTYEIYLHRVGRTARA 561
Query: 249 GKGGVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKY 306
G+ G SV++ GE +R +VK IK+ G R + EI
Sbjct: 562 GREGKSVTLVGESTQERSIVKDAIKSVDG-------SKGSGRACGRVVDWKQVEEIHKLV 614
Query: 307 RAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERA 366
+AK + I GE IL EEK ++ + +A+ ++ K E MLK K+ ++ P R WFQ++ E+
Sbjct: 615 QAKEDVI-GE---ILEEEKQEKEILRAEMEIRKGENMLKFKEEINARPRRTWFQSESEKK 670
Query: 367 AIKTSQA 373
QA
Sbjct: 671 NSSILQA 677
>sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DRS1 PE=3 SV=3
Length = 741
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 143/240 (59%), Gaps = 19/240 (7%)
Query: 132 RIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNL 188
RIRK HL + ALL L+ + + ++FV K AH++ I+LGLLG+K ELHG+L
Sbjct: 447 RIRKRDHL-KPALLFQLLKKLDPAQQSRIVVFVSRKESAHKLRIVLGLLGMKVSELHGSL 505
Query: 189 TQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARA 248
TQ RL ++ FK VLI TD+AARGLDI ++ VINY MP S E Y+HRVGRTARA
Sbjct: 506 TQEQRLNNVNDFKKLIVPVLICTDLAARGLDIPKIEIVINYDMPKSHEVYLHRVGRTARA 565
Query: 249 GKGGVSVSMAGE--VDRKLVKQVIKNAK-NPVKHRIIPPGYPRLKTPSFPPPPLAEIVDK 305
G+ G S+S GE DR +VK IK+ + VK + + + V++
Sbjct: 566 GRDGTSISFVGESTSDRNIVKDAIKSLEGGEVKGKAVSRNIDWVD------------VEQ 613
Query: 306 YRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKER 365
VE+ + ++++L EEK + + +A+ Q++KA M+K +K + P R WF+++K++
Sbjct: 614 LNKIVESKQEIIEEVLDEEKQAKEILQAEMQLAKASNMMKHEKEIQSRPKRTWFESEKDK 673
>sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DRS1 PE=3 SV=2
Length = 705
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 142/238 (59%), Gaps = 16/238 (6%)
Query: 132 RIRKDTHLDRKAL--LAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLT 189
RIRK HL L L LV ++ ++FV K AH + I+LGLLG+K ELHG+LT
Sbjct: 423 RIRKREHLKPALLYHLLRLVDPQQQNRIVVFVSRKEMAHRLRIVLGLLGMKVSELHGSLT 482
Query: 190 QPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAG 249
Q RL+S++ F+ VLI TD+AARGLDI ++ VIN+ MP + E Y+HRVGRTARAG
Sbjct: 483 QEQRLQSVKDFRSLAVPVLICTDLAARGLDIPKIEIVINFDMPKTHEIYLHRVGRTARAG 542
Query: 250 KGGVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYR 307
+ G S++ GE DR +VK IK+ + + + +T + V++
Sbjct: 543 REGRSITFVGESNQDRSIVKDAIKSLEEQKNGKAVS------RTVDWKK------VEELN 590
Query: 308 AKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKER 365
+ VE+ + + ++L EEK + + +A+ Q+ KA ++K +K +H P R WFQ+++E+
Sbjct: 591 SIVESKKDTIDEVLEEEKSAKEILQAEMQLEKASNIMKHEKEIHSRPKRTWFQSEQEK 648
>sp|P0C2N8|DRS1_NEUCR ATP-dependent RNA helicase drs-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=drs-1 PE=3 SV=1
Length = 829
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 138/220 (62%), Gaps = 20/220 (9%)
Query: 149 VCRT-FKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDV 207
+C+T + + +IF K+ AH+M I+ GL G+ ELHG++ Q R++S+ F+D + +
Sbjct: 532 ICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDGKVNF 591
Query: 208 LIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVK 267
L+ATD+A+RGLDI+GV TVINY P + E Y+HRVGRTARAG+ G ++++A E DRK+VK
Sbjct: 592 LLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAEPDRKVVK 651
Query: 268 QVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEE 324
+K K+ + RII P DK++A+++ +E E+++I+ EE
Sbjct: 652 AAVKAGKSQGAKISSRIIDPAD----------------ADKWQAEIDELEDEIEEIMQEE 695
Query: 325 KHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKE 364
K ++ L + QV K E M+K + + P R WF+T+++
Sbjct: 696 KEEKQLQNMEMQVKKGENMIKYEDEISSRPKRTWFETQED 735
>sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DRS1 PE=3 SV=1
Length = 771
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 150/261 (57%), Gaps = 27/261 (10%)
Query: 119 LLRPP----VLLCLLCFRIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMH 171
++ PP + L RIRK HL + ALL L+ + ++ ++FV K AH++
Sbjct: 466 MIDPPKSAAIKLVQEFVRIRKRDHL-KPALLFQLIKSVDPSQQNRIVVFVARKESAHKLR 524
Query: 172 ILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRM 231
I+LGLLG++ ELHG+LTQ RL S+ FK+ VLI TD+AARGLDI ++ VINY M
Sbjct: 525 IILGLLGMRVSELHGSLTQEQRLASVNDFKNLTVPVLICTDLAARGLDIPKIEIVINYDM 584
Query: 232 PHSLEHYIHRVGRTARAGKGGVSVSMAGEV--DRKLVKQVIKN-----AKNPVKHRIIPP 284
P + E Y+HRVGRTARAG+ G S++ GE DR +VK IK+ A+N + + +
Sbjct: 585 PKTHEIYLHRVGRTARAGREGKSITFVGESTQDRAIVKDAIKSISEEQARNSKQGKAVSR 644
Query: 285 GYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKML 344
+ V++ VE+ ++++L EEK + + A+ ++SKA M+
Sbjct: 645 NVDWKE------------VEELNKIVESKATVIEEVLDEEKQAKEMLHAEMELSKATNMI 692
Query: 345 KEKKPLHENPPREWFQTKKER 365
K +K + P R WF+++K++
Sbjct: 693 KHEKEIQSRPRRTWFESEKDK 713
>sp|A1CNV8|DRS1_ASPCL ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=drs1 PE=3 SV=1
Length = 826
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 149/247 (60%), Gaps = 19/247 (7%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
R+R R L L F ++F K+EAH + I+ GLLG+KA ELHG+++Q
Sbjct: 529 RLRPGREGKRLGYLLYLCSEIFTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQE 588
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
R++S+ F++ + L+ATD+A+RGLDI+GV+TVINY P S E Y+HRVGRTARAG+
Sbjct: 589 QRIKSVESFREGKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRS 648
Query: 252 GVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
G + ++A + DRK+VK ++ K + R++ P + D++ A
Sbjct: 649 GRACTIAADPDRKVVKAAVRAGKAQGAKIASRVVEPA----------------VADQWAA 692
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAI 368
KVEA+E E++++L EEK ++ + +A+ QV+K E ++K + P R WF+T++++ A
Sbjct: 693 KVEALEEEIEEVLKEEKLEKHMAQAEMQVTKGENLMKHGAEIMSRPKRTWFETERDKRAS 752
Query: 369 KTSQAGE 375
+ A E
Sbjct: 753 RKLGATE 759
>sp|A6RUH2|DRS1_BOTFB ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain
B05.10) GN=drs1 PE=3 SV=1
Length = 801
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 19/242 (7%)
Query: 131 FRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQ 190
R+R R L L + D ++F K+EAH I+ GL G+KA ELHG+++Q
Sbjct: 490 IRLRPGREGKRMGYLLYLCANVYTDRVIVFFRQKKEAHRARIIFGLSGLKATELHGSMSQ 549
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
R++S+ F+D + L+ATD+A+RGLDI+GV TVINY P S + Y+HRVGRTARAG+
Sbjct: 550 EQRIKSVEAFRDGKASFLLATDLASRGLDIKGVDTVINYEAPQSHDIYLHRVGRTARAGR 609
Query: 251 GGVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYR 307
G + ++A E DRK+VK +K ++ V R+I A D +
Sbjct: 610 SGRACTIAAEPDRKVVKAAVKASRTQGAKVVSRVIE----------------ASEADSWS 653
Query: 308 AKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAA 367
KV+ + E+++IL EEK D++L +A+ +V K + + + + P R WF+T+KE+ A
Sbjct: 654 EKVDEMADEIEEILKEEKEDKILAQAEMEVRKGQNFIDHEAEIKGRPKRTWFETEKEKLA 713
Query: 368 IK 369
K
Sbjct: 714 AK 715
>sp|A7F4L5|DRS1_SCLS1 ATP-dependent RNA helicase drs1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=drs1 PE=3 SV=1
Length = 801
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 140/242 (57%), Gaps = 19/242 (7%)
Query: 131 FRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQ 190
R+R R L L + D ++F K+EAH I+ GL G+KA ELHG+++Q
Sbjct: 490 IRLRPGREGKRMGYLLYLCANVYTDRVIVFFRQKKEAHRARIIFGLSGLKATELHGSMSQ 549
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
R++S+ F+D + L+ATD+A+RGLDI+GV TVINY P S + Y+HRVGRTARAG+
Sbjct: 550 EQRIKSVEAFRDGKASFLLATDLASRGLDIKGVDTVINYEAPQSHDIYLHRVGRTARAGR 609
Query: 251 GGVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYR 307
G + ++A E DRK+VK +K ++ V R+I A D +
Sbjct: 610 SGRACTIAAEPDRKVVKAAVKASRTQGAKVVSRVIE----------------ASEADSWS 653
Query: 308 AKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAA 367
KV+ + E+++IL EEK D++L +A+ +V K + + + + P R WF+++KE+ A
Sbjct: 654 EKVDEMADEIEEILKEEKEDKILAQAEMEVRKGQNFMDHEAEIKGRPKRTWFESEKEKLA 713
Query: 368 IK 369
K
Sbjct: 714 AK 715
>sp|Q4I830|DRS1_GIBZE ATP-dependent RNA helicase DRS1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DRS1 PE=3
SV=1
Length = 796
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 142/246 (57%), Gaps = 21/246 (8%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
R+R R LA + +K+ +IF K++AH I+ GLLG+ ELHG++ Q
Sbjct: 479 RLRPGREDKRMGYLAHVCKNLYKERVIIFFRQKKDAHRARIIFGLLGLSCAELHGSMNQT 538
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
R+ S+ F+D + L+ATD+A+RGLDI+GV TVINY P SL+ Y+HRVGRTARAG+
Sbjct: 539 QRISSVEDFRDGKVAYLLATDLASRGLDIKGVDTVINYEAPQSLDIYVHRVGRTARAGRK 598
Query: 252 GVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRA 308
GV++++A E DRK+VK +K K + R + G VD +
Sbjct: 599 GVALTIAAESDRKVVKAAVKAGKAQGAKIVSRQLDSGE----------------VDALQT 642
Query: 309 KVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAAI 368
+++ ++ E+ +I+ EEK ++ L + QV K E M++ + + P R WF+++ ++
Sbjct: 643 QIDEMDDEIDEIMEEEKEEKQLAHVEMQVKKGENMIQHEAEIKGRPRRTWFESEHDKK-- 700
Query: 369 KTSQAG 374
K+ QAG
Sbjct: 701 KSKQAG 706
>sp|Q6CJV1|DRS1_KLULA ATP-dependent RNA helicase DRS1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DRS1 PE=3 SV=1
Length = 748
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 146/247 (59%), Gaps = 17/247 (6%)
Query: 131 FRIRKDTHLDRKALLAALVCR---TFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGN 187
RIRK HL + ALL L+ + T + ++FV K AH++ I+LGLLG++ GELHG+
Sbjct: 456 IRIRKRDHL-KPALLYQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLLGMQVGELHGS 514
Query: 188 LTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTAR 247
LTQ RL+S+ FK + VLI TD+A+RGLDI ++ VIN+ MP + E Y+HRVGRTAR
Sbjct: 515 LTQEQRLQSVNNFKSLQVPVLICTDLASRGLDIPKIEVVINFDMPKTYEIYLHRVGRTAR 574
Query: 248 AGKGGVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDK 305
AG+ G SV+ GE DR +V+ I++ + + G + + V++
Sbjct: 575 AGREGRSVTFVGESSQDRSIVRSAIRSVEENAES-----GKALSRNVDWTQ------VEQ 623
Query: 306 YRAKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKER 365
+ + A V++I+ EEK ++ + +A+ ++ K E MLK K+ + P R WFQ++ E+
Sbjct: 624 VNSLIGAKGDVVEEIIEEEKQEKEILRAEMELRKGENMLKHKEEISARPRRTWFQSEAEK 683
Query: 366 AAIKTSQ 372
K Q
Sbjct: 684 KNSKMLQ 690
>sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DRS1 PE=3 SV=1
Length = 613
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 136/236 (57%), Gaps = 32/236 (13%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
RIRK L + ALL L+ + ++FV K AH + I+LGLLG+K ELHG LTQ
Sbjct: 353 RIRKRDQL-KPALLYQLL-KGVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQE 410
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
RL++++ FK E VLI TD+AARGLDI ++ VINY MP + E Y+HRVGRTARAG+
Sbjct: 411 QRLQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARAGRD 470
Query: 252 GVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAK 309
G S++ GE +R +VK I N K +A+ VD +A+
Sbjct: 471 GTSITFVGESSQERAIVKSAIVNGKG-----------------------VAKTVDWKQAE 507
Query: 310 -----VEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQ 360
+E+ E + ++L EEK + L +A+ +++KA ++K ++ +H P R WF+
Sbjct: 508 ETNKLLESKESVIDEVLEEEKEAKELLRAEMELTKASNLIKHEQEIHSRPKRTWFK 563
>sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DRS1 PE=3 SV=1
Length = 686
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 140/233 (60%), Gaps = 23/233 (9%)
Query: 132 RIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQP 191
RIRK L K + L+ + + T++F TK EAH++ I+LGLLG+ ELHG LTQ
Sbjct: 421 RIRKREEL--KPAVLYLLLKKLEGRTVVFTRTKVEAHKLRIILGLLGLTVAELHGALTQE 478
Query: 192 SRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKG 251
RL +++ FK+ +VLI TD+AARGLDIR ++ VINY MP + E Y HRVGRTARAG+
Sbjct: 479 QRLANVKAFKN-NVNVLICTDLAARGLDIR-IEYVINYDMPKTYEIYTHRVGRTARAGRK 536
Query: 252 GVSVSMAGEV--DRKLVKQVIKNAKNPVKHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAK 309
G S+S GE DR +VK I+ V +I + V+K + K
Sbjct: 537 GTSISFVGESMQDRNIVKNAIQFNSRSVARKID-----------------WDEVEKIQTK 579
Query: 310 VEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTK 362
++ EG +++++ EEK R + +A+ Q++KAE ++K +K + P R WF+++
Sbjct: 580 IKLNEGAIEEVIEEEKQAREIMRAEMQLNKAENLMKYEKEIKSRPKRTWFKSE 632
>sp|P0C2N7|DRS1_CHAGB ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DRS1 PE=3 SV=1
Length = 795
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 112/182 (61%), Gaps = 19/182 (10%)
Query: 191 PSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGK 250
P + E F+D + + L+ATD+A+RGLDI+G+ TVINY P SLE Y+HRVGRTARAG+
Sbjct: 552 PWKHEPGSAFRDGKVNYLLATDLASRGLDIKGIDTVINYEAPQSLEIYVHRVGRTARAGR 611
Query: 251 GGVSVSMAGEVDRKLVKQVIKNAKNP---VKHRIIPPGYPRLKTPSFPPPPLAEIVDKYR 307
GV++++A E DRK+VK ++ K + R+I A DK++
Sbjct: 612 SGVAITLAAEPDRKVVKAAVRAGKAQGAKIISRVID----------------AADADKWQ 655
Query: 308 AKVEAIEGEVQKILTEEKHDRLLNKADEQVSKAEKMLKEKKPLHENPPREWFQTKKERAA 367
+++ ++ E+ +IL EEK ++ L + + QV K E ++K ++ +H P R WF+T++++
Sbjct: 656 DQIDEMDDEIDEILQEEKEEKQLAQIEMQVKKGENLIKHEEEIHARPKRTWFETQEDKKK 715
Query: 368 IK 369
K
Sbjct: 716 AK 717
>sp|Q49Z29|Y802_STAS1 Probable DEAD-box ATP-dependent RNA helicase SSP0802
OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=SSP0802 PE=3 SV=1
Length = 506
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 17/178 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ D+L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK GV+++ ++ ++Q+ + K
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFVNPIEMDYIRQIEQANKR-- 361
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRLLNKADE 335
+ + PP E++ +A+ I+G+VQ ++ + RL A E
Sbjct: 362 ------------QMTALRPPHRKEVL---KARENDIKGKVQNWMSRDNEPRLQRIATE 404
>sp|Q5HME0|Y1688_STAEQ Probable DEAD-box ATP-dependent RNA helicase SERP1688
OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=SERP1688 PE=3 SV=1
Length = 509
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ D+L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q+ V
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI-----EDV 358
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
+R R+K + PP E++ +A+ + I+ VQ ++ E RL
Sbjct: 359 NNR-------RMK--ALRPPHRKEVL---KAREDDIKDRVQNWMSRENEPRL 398
>sp|Q8CRP6|Y1679_STAES Probable DEAD-box ATP-dependent RNA helicase SE_1679
OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=SE_1679 PE=3 SV=1
Length = 509
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ D+L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q+ V
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI-----EDV 358
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
+R R+K + PP E++ +A+ + I+ VQ ++ E RL
Sbjct: 359 NNR-------RMK--ALRPPHRKEVL---KAREDDIKDRVQNWMSRENEPRL 398
>sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRP3 PE=3 SV=1
Length = 480
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 83/138 (60%), Gaps = 6/138 (4%)
Query: 128 LLCFRIRKDTHLDRKALLAALVCRTFKDHTMIFVPTKREAHEMHILLGLLGIKAGELHGN 187
+ C KDTHL LV + +IF TK + + +LL LG A LHG+
Sbjct: 283 VFCPFKHKDTHL------VYLVSENAGNSMIIFARTKSDTQRISLLLRNLGYGAIPLHGD 336
Query: 188 LTQPSRLESLRKFKDEETDVLIATDVAARGLDIRGVKTVINYRMPHSLEHYIHRVGRTAR 247
L+Q +RL +L KFK ++LIATDVA+RGLDI V VINY +P + YIHRVGRTAR
Sbjct: 337 LSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRTAR 396
Query: 248 AGKGGVSVSMAGEVDRKL 265
AG+ G SV++ + D +L
Sbjct: 397 AGRAGKSVALVSQYDLEL 414
>sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=RRP3 PE=3 SV=2
Length = 546
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 77/113 (68%)
Query: 157 TMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAAR 216
T++F T E + +LL LG +A LHG L+Q +RL +L KFK + D+L+ATDVAAR
Sbjct: 359 TILFTRTVNETQRLAVLLRTLGFQALPLHGQLSQSNRLGALNKFKAKARDILVATDVAAR 418
Query: 217 GLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQV 269
GLDI V V+N+ +PH E Y+HRVGRTARAGK G +VS + D ++ +++
Sbjct: 419 GLDIPSVDLVVNFDLPHDSETYVHRVGRTARAGKSGKAVSFVTQYDLEIFQRI 471
>sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRP3 PE=3
SV=1
Length = 486
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 92/166 (55%), Gaps = 18/166 (10%)
Query: 98 VAYCWSKGTFQSNASM-TSFLFLLRPPVLLCLLCFRIRKDTHLDRKALLAALVCRTFKDH 156
V S +Q+ +++ ++LF+ P +KD HL L+
Sbjct: 260 VKVSISSNKYQTVSTLLQNYLFIPHP-----------QKDVHL------IYLINEHAGQS 302
Query: 157 TMIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAAR 216
T++F T E + ILL LG A LHG L+Q SRL +L KF+ D+L+ATDVAAR
Sbjct: 303 TIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRSGTRDILVATDVAAR 362
Query: 217 GLDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVD 262
GLDI V V+NY +P + YIHRVGRTARAGK GV++S+ + D
Sbjct: 363 GLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISLVTQYD 408
>sp|Q4L7W0|Y956_STAHJ Probable DEAD-box ATP-dependent RNA helicase SH0956
OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=SH0956 PE=3 SV=1
Length = 503
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 75/112 (66%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ D+L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQV 269
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q+
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQI 355
>sp|Q2YUH3|Y1965_STAAB Probable DEAD-box ATP-dependent RNA helicase SAB1965c
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=SAB1965c PE=3 SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
>sp|Q2FWH5|Y2316_STAA8 Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316
OS=Staphylococcus aureus (strain NCTC 8325)
GN=SAOUHSC_02316 PE=3 SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
>sp|Q99SH6|Y2081_STAAM Probable DEAD-box ATP-dependent RNA helicase SAV2081
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=SAV2081 PE=3 SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
>sp|Q5HEB9|Y2072_STAAC Probable DEAD-box ATP-dependent RNA helicase SACOL2072
OS=Staphylococcus aureus (strain COL) GN=SACOL2072 PE=3
SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
>sp|Q2FF45|Y2037_STAA3 Probable DEAD-box ATP-dependent RNA helicase SAUSA300_2037
OS=Staphylococcus aureus (strain USA300)
GN=SAUSA300_2037 PE=3 SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
>sp|Q7A0D2|Y2004_STAAW Probable DEAD-box ATP-dependent RNA helicase MW2004
OS=Staphylococcus aureus (strain MW2) GN=MW2004 PE=3
SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
>sp|Q6G7M9|Y1985_STAAS Probable DEAD-box ATP-dependent RNA helicase SAS1985
OS=Staphylococcus aureus (strain MSSA476) GN=SAS1985
PE=3 SV=1
Length = 506
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 100/172 (58%), Gaps = 17/172 (9%)
Query: 158 MIFVPTKREAHEMHILLGLLGIKAGELHGNLTQPSRLESLRKFKDEETDVLIATDVAARG 217
++F TKR E+ L G KA LHG++TQ RLE L+KFK+++ ++L+ATDVAARG
Sbjct: 244 IVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARG 303
Query: 218 LDIRGVKTVINYRMPHSLEHYIHRVGRTARAGKGGVSVSMAGEVDRKLVKQVIKNAKNPV 277
LDI GV V N+ +P E Y HR+GRT RAGK G++V+ ++ ++Q I++A
Sbjct: 304 LDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQ-IEDANG-- 360
Query: 278 KHRIIPPGYPRLKTPSFPPPPLAEIVDKYRAKVEAIEGEVQKILTEEKHDRL 329
K + PP E++ +A+ + I+ +V+ +++E RL
Sbjct: 361 -----------RKMSALRPPHRKEVL---QAREDDIKEKVENWMSKESESRL 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,338,100
Number of Sequences: 539616
Number of extensions: 6452139
Number of successful extensions: 28157
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 26000
Number of HSP's gapped (non-prelim): 2067
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)