BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3148
(123 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G +DL LKRMMEKLG P+THL +K MI EV + IS+R+ ++
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G +DL LKRMMEKLG P+THL +K MI EV + IS+R+ ++
Sbjct: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISF 61
+D +G +D+ LKRM+EKLG P+THL LK +I+EV ++ S+
Sbjct: 57 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSY 103
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.7 bits (99), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D D I F E + K+
Sbjct: 311 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKD 370
Query: 75 TDS 77
TDS
Sbjct: 371 TDS 373
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 384 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 440
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 14 RYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISF 61
+D +G +D+ LKRM+EKLG P+THL LK +I EV + S+
Sbjct: 40 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 87
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISF 61
+D +G +D+ LKRM+EKLG P+THL LK +I EV + S+
Sbjct: 60 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 106
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D DG + ++EL+R M LG P L AMI+E D D D ++++ E +
Sbjct: 15 FDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D D I F E + K+
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKD 378
Query: 75 TDS 77
TDS
Sbjct: 379 TDS 381
Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 392 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D D I F E + K+
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKY 378
Query: 75 TDS 77
TDS
Sbjct: 379 TDS 381
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 392 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D D I F E + K+
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKY 378
Query: 75 TDS 77
TDS
Sbjct: 379 TDS 381
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 392 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 448
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS ++ L DKN + D + K +L
Sbjct: 88 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIML 121
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D D I F E + K+
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKY 379
Query: 75 TDS 77
TDS
Sbjct: 380 TDS 382
Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS ++ L DKN + D + K +L
Sbjct: 88 DSKGKTEEELSDLFRMFDKNADGYIDLEELKIML 121
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 24 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS + ++ L DKN + D + K +L
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLEELKIML 121
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 14 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 68
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 16 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 70
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D D I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E +L K+
Sbjct: 20 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D ++GF+ EL+ +M LG T + MI+E D D D +I++ E +
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E +L K+
Sbjct: 20 FDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D ++GF+ EL+ +M LG T + MI+E D D D +I++ E +
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E +L K+
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 75
Query: 75 TDSP 78
TDS
Sbjct: 76 TDSE 79
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 89 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E +L K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DLEELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 19 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 73
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E +L K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 345
Query: 75 TDS 77
TDS
Sbjct: 346 TDS 348
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 359 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 345
Query: 75 TDS 77
TDS
Sbjct: 346 TDS 348
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 359 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 415
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 283 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 342
Query: 75 TDS 77
TDS
Sbjct: 343 TDS 345
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 356 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 321 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 380
Query: 75 TDS 77
TDS
Sbjct: 381 TDS 383
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 394 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 450
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 379
Query: 75 TDS 77
TDS
Sbjct: 380 TDS 382
Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DL+ELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 104 WDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS + ++ L DKN + D K +L
Sbjct: 88 DSKGKSEEELSDLFRMWDKNADGYIDLDELKIML 121
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 379
Query: 75 TDS 77
TDS
Sbjct: 380 TDS 382
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS + ++ L DKN + D K +L
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLDELKIML 121
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DL+ELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMK 158
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS + ++ L DKN + D K +L
Sbjct: 88 DSKGKSEEELSDLFRMFDKNADGYIDLDELKIML 121
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DL+ELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMK 158
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKY 379
Query: 75 TDS 77
TDS
Sbjct: 380 TDS 382
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG++DL+ELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 15 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 69
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDS 77
TDS
Sbjct: 79 TDS 81
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGST 75
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK---D 87
Query: 76 DSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLL 109
DS + ++ L DKN + D K +L
Sbjct: 88 DSKGKSEEELSDLFRMXDKNADGYIDLDELKIML 121
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
D DG++DL+ELK M++ G T ++ ++K+ D++ND +I + E K
Sbjct: 105 DKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 74
Query: 75 TDSPVL 80
TDS +
Sbjct: 75 TDSEEI 80
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E + D D ++++ E +
Sbjct: 87 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 139
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKL 72
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + KL
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKL 150
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 75
Query: 75 TDSP 78
TDS
Sbjct: 76 TDSE 79
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 89 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTAK 148
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 75 TDSP 78
TDS
Sbjct: 77 TDSE 80
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 90 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E + D D ++++ E + K
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTAK 148
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTTK 149
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTM 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 23 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 82
Query: 75 TDSP 78
TDS
Sbjct: 83 TDSE 86
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 96 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 152
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 21 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 80
Query: 75 TDSP 78
TDS
Sbjct: 81 TDSE 84
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 94 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 150
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 75 TDSP 78
TDS
Sbjct: 77 TDSE 80
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 90 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 75 TDSP 78
TDS
Sbjct: 77 TDSE 80
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 90 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 75 TDSP 78
TDS
Sbjct: 80 TDSE 83
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 25 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 84
Query: 75 TDSP 78
TDS
Sbjct: 85 TDSE 88
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 98 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TDSP 78
TDS
Sbjct: 79 TDSE 82
Score = 33.1 bits (74), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 148
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 74
Query: 75 TDSP 78
TDS
Sbjct: 75 TDSE 78
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 88 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 144
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 18 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 77
Query: 75 TDSP 78
TDS
Sbjct: 78 TDSE 81
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 91 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D G +D +ELK M LG +K MI E+D+D I F E + K+G
Sbjct: 37 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGE 96
Query: 75 TDS 77
DS
Sbjct: 97 RDS 99
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + +++L+R+ ++LG T L+ MI E D ++DN+I E + K
Sbjct: 110 FDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 164
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+L D +D DGF+D+EEL ++ G T ++ ++K+ D++ND +I F E
Sbjct: 96 EELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + +EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 91
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ DKN F D +
Sbjct: 92 GKSEEELADCFRIFDKNADGFIDIE 116
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DGF+D+EEL ++ G T ++ ++K+ D++ND +I F E
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + +EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 91
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ DKN F D +
Sbjct: 92 GKSEEELANCFRIFDKNADGFIDIE 116
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DGF+D+EEL ++ G T ++ ++K+ D++ND +I F E
Sbjct: 102 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 150
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + +EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 32 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 88
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ DKN F D +
Sbjct: 89 GKSEEELANCFRIFDKNADGFIDIE 113
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL--RKLK 71
+D DG + +EL +M LG T L+ MI EVD D D I F E + RK+K
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 77
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + K+
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 75 TD 76
TD
Sbjct: 79 TD 80
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DGF+D+EEL ++ G T ++ ++K+ D++ND +I F E
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDE 153
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + +EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 91
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ DKN F D +
Sbjct: 92 GKSEEELEDCFRIFDKNADGFIDIE 116
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + ++EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 32 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 88
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ L D+N + D +
Sbjct: 89 GKSEEELAELFRIFDRNADGYIDAE 113
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DG++D EEL + G T +++++K+ D++ND +I F E
Sbjct: 102 FDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D G +D +ELK M LG +K MI ++D+D I F E + K+G
Sbjct: 17 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGE 76
Query: 75 TDS 77
DS
Sbjct: 77 RDS 79
Score = 32.0 bits (71), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + + LKR+ ++LG T L+ MI E D D D +++ E + K
Sbjct: 90 FDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRIMK 144
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL +M LG T L+ MI EVD D + I F E + +
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKD 379
Query: 75 TDS 77
TDS
Sbjct: 380 TDS 382
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 449
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 13 TRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKL 72
+ +D G++ L+E+++ + G H+ MIKE+D+DND +I + E + + +
Sbjct: 89 SYFDKDGSGYITLDEIQQACKDFGLDDIHI--DDMIKEIDQDNDGQIDYGEFAAMMRKRK 146
Query: 73 GS 74
G+
Sbjct: 147 GN 148
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D ++GF+ EL+ +M LG T + MI+E D D D +I++ E +
Sbjct: 13 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 17 DGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
D DG + +EL ++M LG T L+ MI EVDED + F E
Sbjct: 30 DAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 17 DGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
D DG + +EL ++M LG T L+ MI EVDED + F E
Sbjct: 30 DAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EEL ++ L T L+ MI EVD D + I F E L K+
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKD 78
Query: 75 TDSP 78
TD+
Sbjct: 79 TDAE 82
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D ++G++ EL+ +M LG T ++ MIKE D D D ++++ E +
Sbjct: 92 FDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + +EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 91
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ DKN F D +
Sbjct: 92 GKSEEELANCFRIFDKNADGFIDIE 116
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DGF+D+EEL ++ G ++ ++K+ D++ND +I F E
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 153
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
YD DG + +EL +M LG T L+ MI EVD D + I F E
Sbjct: 19 YDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPE 67
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D ++G++ EL+ +M LG T ++ MIKE D D D ++++ E +
Sbjct: 18 FDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of
This Allosteric Motor
Length = 157
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
++++ + T D RDGF+D+ +LK M LG L AM+KE ++F
Sbjct: 18 IQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 73
Query: 65 THLRKLKLGSTDS 77
+ KL TDS
Sbjct: 74 LSIFSDKLSGTDS 86
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D ++G++ EL+ +M LG T ++ MIKE D D D ++++ E +
Sbjct: 13 FDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + + LKR+ ++LG T L+ MI E D D D ++S +E + K
Sbjct: 30 FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 84
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth
Muscle Myosin
Length = 161
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
++++ + T D RDGF+D+ +LK M LG L AM+KE ++F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 77
Query: 65 THLRKLKLGSTDS 77
+ KL TDS
Sbjct: 78 LSIFSDKLSGTDS 90
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 33.9 bits (76), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
++++ + T D RDGF+D+ +LK M LG L AM+KE ++F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 77
Query: 65 THLRKLKLGSTDS 77
+ KL TDS
Sbjct: 78 LSIFSDKLSGTDS 90
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + +++L+R+ ++LG T L+ MI E D ++DN+I E + K
Sbjct: 18 FDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMK 72
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DGF+D+EEL ++ G ++ ++K+ D++ND +I F E
Sbjct: 19 FDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLKLGSTDSP 78
G + ++EL +M LG T L A+I+EVDED I F E + +R++K D+
Sbjct: 32 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK---EDAK 88
Query: 79 VLAMPKVPGLITTIDKNLYSFFDCK 103
+ ++ D+N + D +
Sbjct: 89 GKSEEELAECFRIFDRNADGYIDAE 113
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DG++D EEL + G T +++++K+ D++ND +I F E
Sbjct: 102 FDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDE 150
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + + LKR+ ++LG T L+ MI E D D D ++S +E + K
Sbjct: 20 FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 74
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 15 YDDGRDGFLDLEELKRMMEKLG-APQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+D DG +D +E K +M+K+G P T ++ +KE DED + I E L K
Sbjct: 17 FDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + + LKR+ ++LG T L+ MI E D D D ++S +E + K
Sbjct: 88 FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142
Score = 28.5 bits (62), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 21 GFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGSTDSP 78
G +D++ELK M LG +K MI E+D++ K++F + + K+ D+
Sbjct: 21 GTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK 78
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
DG + +EL ++M LG T L+ MI EVDED + F E + +R +K
Sbjct: 31 AEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 86
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EEL ++ L T L+ MI EVD D + I F E L K+
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKD 78
Query: 75 T 75
T
Sbjct: 79 T 79
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 90 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
DG + +EL ++M LG T L+ MI EVDED + F E
Sbjct: 31 AEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
DG + +EL ++M LG T L+ MI EVDED + F E
Sbjct: 31 AEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 14 RYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLG 73
R+D DG + EL ++ LG+ T +K M+ E+D D D ISF+E T + G
Sbjct: 17 RFDANGDGKISAAELGEALKTLGSI-TPDEVKHMMAEIDTDGDGFISFQEFTDFGRANRG 75
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 6 RQLLDNTTR----YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISF 61
R LD R +DD G + ++ L+R+ ++LG T L+AMI+E D D D +I+
Sbjct: 92 RDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINE 151
Query: 62 REITHL 67
E +
Sbjct: 152 NEFIAI 157
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
DG + +EL ++M LG T L+ MI EVDED + F E
Sbjct: 31 AEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
DG + +EL ++M LG T L+ MI EVDED + F E
Sbjct: 31 AEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDE 76
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
+++L + T D RDGF+ +E+LK M LG L AM+KE +++F
Sbjct: 15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAF 70
Query: 65 THLRKLKLGSTDSPVLAMPKVPGLITTIDKNLYSFFDCKCFKGLLPD 111
L K+ TD P A+ +N +S FD +G +P+
Sbjct: 71 LTLFGEKVSGTD-PEDAL-----------RNAFSMFDEDG-QGFIPE 104
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + EL +M LG T L+ M+ E+D D + + F E + K+
Sbjct: 19 FDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKD 78
Query: 75 TDSP 78
TD+
Sbjct: 79 TDNE 82
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +GF+ EL+ +M +LG + + MI+ D D D ++++ E +
Sbjct: 92 FDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRV 144
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 15 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 71
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 11 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 17 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 73
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.3 bits (72), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKL-GAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+++L D +D DG + EL+ M KL G H ++ +I++VD + D ++ F E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 64 ITHL 67
+
Sbjct: 161 FVRM 164
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 32.3 bits (72), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 14 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.3 bits (72), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKL 72
+D DG + +EEL ++ L T L+ MI EVD D + I F E L K+
Sbjct: 19 FDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKV 76
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 18 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 74
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
L ++ + +D +GF+ +EL M LG + L+ +I+ +D D D ++ F E
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 65 THL 67
L
Sbjct: 95 VTL 97
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D +G++ EL+ +M LG T + MI+E D D D ++++ E +
Sbjct: 14 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
+D G + +EL +M LG T L A+I+EVDED I F E + +R++K
Sbjct: 18 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 76
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
+D G + +EL +M LG T L A+I EVDED I F E + +R++K
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMMVRQMK 87
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.0 bits (71), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKL-GAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+++L D +D DG + EL+ M KL G H ++ +I++VD + D ++ F E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 64 ITHL 67
+
Sbjct: 147 FVRM 150
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 32.0 bits (71), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRK 69
+DD G + + LKR+ ++LG T L+ I E D D D ++S +E + K
Sbjct: 113 FDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXK 167
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
+D G + +EL +M LG T L A+I+EVDED I F E + +R++K
Sbjct: 29 FDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKL-GAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+++L D +D DG + EL+ M KL G H ++ +I++VD + D ++ F E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 64 ITHL 67
+
Sbjct: 66 FVRM 69
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKL 72
+D G +D +ELK M LG +K MI E+D+D I F E + K+
Sbjct: 39 FDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKM 96
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 20 DGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+G++ EL+ +M LG T + MI+E D D D ++++ E + K
Sbjct: 43 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 94
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
+D DGF+ EL+ +M LG T + MI+E D D D I++ E +
Sbjct: 92 FDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWM 144
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
++++ + T D RDGF+D+ +LK LG L AM+KE ++F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 56
Query: 65 THLRKLKLGSTDS 77
+ KL TDS
Sbjct: 57 LSIFSDKLSGTDS 69
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 16 DDGRDGFLDLEELKRMMEKL--GAPQ-THLGLKAMIKEVDEDNDNKI---SFREITH 66
D+ + G+LD EELK ++K GA + T K+++ D D D KI F+E+ H
Sbjct: 52 DNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVH 108
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 14 RYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLG 73
R+D DG + EL ++ LG+ T ++ M+ E+D D D ISF E T + G
Sbjct: 19 RFDTNGDGKISSSELGDALKTLGSV-TPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG 77
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 44 LKAMIKEVDEDNDNKISFREITHLRKLKL 72
+K MI+EVD++ D KI F E + + KL L
Sbjct: 168 VKKMIREVDKNGDGKIDFYEFSEMMKLTL 196
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 44 LKAMIKEVDEDNDNKISFREITHLRKL 70
+K MI++VD++ND KI F E + + KL
Sbjct: 165 VKRMIRDVDKNNDGKIDFHEFSEMMKL 191
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 6 RQLLDNTTR----YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISF 61
R LD R +DD G + ++ L+R+ ++LG T L+A I+E D D D +I+
Sbjct: 92 RDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINE 151
Query: 62 REITHL 67
E +
Sbjct: 152 NEFIAI 157
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKL-GAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+++L D +D DG + EL+ M L G H ++ +I++VD + D ++ F E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 64 ITHL 67
+
Sbjct: 147 FVRM 150
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D R GF+ E L+ ++++ G M E D + KI F E + ++
Sbjct: 15 FDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQ 74
Query: 75 TDS 77
T S
Sbjct: 75 TTS 77
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISF 61
+D G +D++ELK M LG +K MI E+D++ K++F
Sbjct: 40 FDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
+L++ +D +G + EL+ +M LG T + MI+E D D D I++ E
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 66 HL 67
+
Sbjct: 143 RM 144
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
+L++ +D +G + EL+ +M LG T + MI+E D D D I++ E
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 66 HL 67
+
Sbjct: 143 RM 144
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 29.6 bits (65), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE--ITHLRKLK 71
+D G + + L +M LG T L A+I+EVDED I F E + +R++K
Sbjct: 29 FDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 14 RYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
R+D DG + L EL + LG+ ++ M+ E+D D D I F E
Sbjct: 10 RFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFISF 62
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 44 LKAMIKEVDEDNDNKISFREITHLRKLKLGSTDSPVLAMPKVPGLITTIDKNLYSFFD-- 101
++ + K D + D KIS E+T + LGST + +V ++ ID + F D
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALR-TLGST-----SADEVQRMMAEIDTDGDGFIDFN 57
Query: 102 -----CKCFKGLLPDV 112
C GL+ DV
Sbjct: 58 EFISFCNANPGLMKDV 73
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
+L++ +D +G + EL+ +M LG T + MI+E D D D I++ E
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 66 HL 67
+
Sbjct: 68 RM 69
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 14 RYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHL 67
R+D DG + L EL + LG+ ++ M+ E+D D D I F E
Sbjct: 11 RFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 63
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 44 LKAMIKEVDEDNDNKISFREITHLRKLKLGSTDSPVLAMPKVPGLITTIDKNLYSFFD-- 101
++ + K D + D KIS E+T + LGST + +V ++ ID + F D
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALR-TLGST-----SADEVQRMMAEIDTDGDGFIDFN 58
Query: 102 -----CKCFKGLLPDV 112
C GL+ DV
Sbjct: 59 EFISFCNANPGLMKDV 74
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ +L+ +M LG T + MI+E D D D ++++ + + K
Sbjct: 16 FDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMMTAK 72
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 13 TRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
T +D G++ +EL++ E+ G + + + ++VD+DND +I + E
Sbjct: 106 TYFDKDGSGYITPDELQQACEEFGVEDVRI--EELXRDVDQDNDGRIDYNEFV 156
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 26 EELKRMMEKLGAPQTHLGLKA---MIKEVDEDNDNKISFREITHLRK 69
EELK +M+ LG P G+ MI+EVD++ D ++SF E + K
Sbjct: 27 EELKLVMQTLG-PSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK 72
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL + LG T L+ I EVD D + I F E K
Sbjct: 20 FDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKD 79
Query: 75 TDS 77
TDS
Sbjct: 80 TDS 82
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ + LG T + I+E D D D ++++ E K
Sbjct: 93 FDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQXXTAK 149
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGS 74
+D DG + +EL + LG T L+ I EVD D + I F E K
Sbjct: 19 FDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKD 78
Query: 75 TDS 77
TDS
Sbjct: 79 TDS 81
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ + LG T + I+E D D D ++++ E K
Sbjct: 92 FDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 28.9 bits (63), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 18 GRDGFLDLEELKRMMEKLG-----APQTHLGLKAMIKEVDEDNDNKISFREITHL 67
G+DG +D EEL+R + + G +P + + MI +D D+ K+ F L
Sbjct: 11 GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEV 51
++++ + + D RDGF+ E++K + E+LG L AM+KE
Sbjct: 5 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA 51
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
Length = 139
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
++++ + + D RDGF+ E++K + E+LG L AM+KE ++F
Sbjct: 6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA----PGPLNFTMF 61
Query: 65 THLRKLKLGSTDS 77
+ KL TDS
Sbjct: 62 LSIFSDKLSGTDS 74
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 18 GRDGFLDLEELKRMMEKLG-----APQTHLGLKAMIKEVDEDNDNKISFREITHL 67
G+DG +D EEL+R + + G +P + + MI +D D+ K+ F L
Sbjct: 11 GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKEL 65
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEV 51
++++ + + D RDGF+ E++K + E+LG L AM+KE
Sbjct: 3 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA 49
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQ---THLGLKAMIKEVDEDNDNKI---SFREITH 66
D+ + G+LD +ELK ++K + T K+++ D D D KI F+E+ H
Sbjct: 51 DNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility
And Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel
Nucleotide Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever
Arm) With Reconstituted Complete Light Chains
Length = 156
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEV 51
++++ + + D RDGF+ E++K + E+LG L AM+KE
Sbjct: 17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA 63
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
Length = 143
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEV 51
D RDGF+D E+L M+ +G T L+ M+ E
Sbjct: 17 DQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA 52
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 5 LRQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEV 51
++++ + + D RDGF+ E++K + E+LG L AM+KE
Sbjct: 6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEA 52
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 18 GRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
DG + +EL ++ LG T L+ I EVDED + F E
Sbjct: 31 AEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDE 76
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 21 GFLDLEELKRMMEKLGAPQ---THLGLKAMIKEVDEDNDNKISFREITHL 67
GF++ EELK +++ A T KA +K D+D D KI E L
Sbjct: 57 GFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETL 106
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
++LL+ +D DG + ELK ++ +G T + M++EV D +I+ ++
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFA 142
Query: 66 HLRKLKLGSTD--------SPVLAMPKVPGLITTI 92
L L GS+ + +LA+ KV + + +
Sbjct: 143 AL--LSKGSSTGTRRKALRNKILAIAKVSRMFSVL 175
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKI 59
+D D L EEL +M LGA T + ++K+ D+DN K
Sbjct: 23 FDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
>pdb|3E8O|A Chain A, Crystal Structure Of A Putative Antibiotic Biosynthesis
Monooxygenase (Dr_2100) From Deinococcus Radiodurans At
1.40 A Resolution
pdb|3E8O|B Chain B, Crystal Structure Of A Putative Antibiotic Biosynthesis
Monooxygenase (Dr_2100) From Deinococcus Radiodurans At
1.40 A Resolution
Length = 119
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 3 AFLRQLL---DNTTRYDDGRDGFLDLEELKR--------MMEKLGAPQTHLGLKAMIKEV 51
A LRQLL TR +DG +L E+L + + LGA THL L + + +
Sbjct: 34 AHLRQLLVHIAQATRQEDGCLLYLVSEDLSQPGHFLITEHWDNLGAXHTHLALPGVTQAI 93
Query: 52 D 52
D
Sbjct: 94 D 94
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 20 DGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+G++ +L+ +M LG T + MI+E D D ++++ + + K
Sbjct: 398 NGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTAK 449
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D DG + +EL + LG T L+ I EVD D + I+F E
Sbjct: 19 FDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPE 67
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLK 71
+D +G++ EL+ + LG T + I+E D D D ++++ E K
Sbjct: 92 FDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTAK 148
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
++LL+ +D DG + ELK ++ +G T + M++EV D +I+ ++
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFA 142
Query: 66 HL 67
L
Sbjct: 143 AL 144
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQTHLG---LKAMIKEVDEDNDNKISFREITHLRK 69
D + GF++ +ELK ++ A L K +K D D D KI E T L K
Sbjct: 52 DQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEFTALVK 108
>pdb|2E8G|A Chain A, The Structure Of Protein From P. Horikoshii At 1.7
Angstrom Resolution
pdb|2E8G|B Chain B, The Structure Of Protein From P. Horikoshii At 1.7
Angstrom Resolution
Length = 241
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 26 EELKRMMEKLGAPQTHLGLKAMIKEVD----EDNDNKISFREITHL---RKLKLGSTDSP 78
E+ K ++E LG H + D E+ +I F T L R+LKLG + P
Sbjct: 73 EKAKGIIEALGGEDWHHKFLSQASREDREKVEEQVARIKFFLNTILNLDRRLKLGKINDP 132
Query: 79 VLAMPKVPGLITTIDKN 95
V+A+ V G + ++ K+
Sbjct: 133 VIAVDIVVGEVMSVGKH 149
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
YD +G++ + ++ ++ +L + L AMI E+D D + F E
Sbjct: 100 YDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 148
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQTHLG---LKAMIKEVDEDNDNKISFREITHLRK 69
D + GF++ +ELK ++ A L K +K D D D KI E T L K
Sbjct: 51 DQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEWTALVK 107
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 19 RDGFLDLEELKRMMEKLGAPQTHLG---LKAMIKEVDEDNDNKISFREITHLRK 69
+ GF++ +ELK ++ A L K +K D D D KI E T L K
Sbjct: 54 KSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEWTALVK 107
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 15 YDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
YD +G++ + ++ ++ +L + L AMI E+D D + F E
Sbjct: 12 YDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 15 YDDGRDGFLDLEELKRMM--EKLGAPQTHLGLKAMIKEVDEDNDNKISFRE 63
+D +G + +EELKR+ + + P + ++++EVD + D +I F E
Sbjct: 138 FDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHE 188
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQTHLGL---KAMIKEVDEDNDNKISFREITHL 67
D +DGF+D +EL +++ + L K ++ D+D D KI E + L
Sbjct: 51 DKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREIT 65
++LL+ +D DG + ELK ++ +G T + M++EV D +I+ ++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFA 141
Query: 66 HL 67
L
Sbjct: 142 AL 143
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 44 LKAMIKEVDEDNDNKISFREITHLRKLKLGSTDS 77
L+ MI EVD D + I F E + K+ TDS
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 36
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 15 YDDGRDGFLDLEELKRMME-KLGAPQTHLGLKAM----IKEVDEDNDNKISFREIT 65
YD RDG + E+ +++ +G T L+ + ++E DED D +SF E T
Sbjct: 123 YDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFT 178
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 16 DDGRDGFLDLEELKRMMEKLGAPQTHLG---LKAMIKEVDEDNDNKISFREITHL 67
D + GF++ EELK +++ A L KA++ D D+D KI E +
Sbjct: 51 DKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKM 105
>pdb|4II2|A Chain A, Crystal Structure Of Ubiquitin Activating Enzyme 1 (uba1)
In Complex With The Ub E2 Ubc4, Ubiquitin, And Atp/mg
pdb|4II3|A Chain A, Crystal Structure Of S. Pombe Ubiquitin Activating Enzyme
1 (uba1) In Complex With Ubiquitin And Atp/mg
pdb|4II3|C Chain C, Crystal Structure Of S. Pombe Ubiquitin Activating Enzyme
1 (uba1) In Complex With Ubiquitin And Atp/mg
Length = 1001
Score = 25.4 bits (54), Expect = 7.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 24 DLEELKRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREITHLRKLKLGSTD 76
D +ELK + + L P + +G + E ++D+D+ IT L+ + D
Sbjct: 772 DKQELKSIADSLPPPSSLVGFRLTPAEFEKDDDSNHHIDFITAASNLRAMNYD 824
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 25.4 bits (54), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 6 RQLLDNTTRYDDGRDGFLDLEELKRMMEKL------GAPQTHLG--LKAMIKEVDEDNDN 57
+ + +YD GF++ EELK ++ L T L M+K D +ND
Sbjct: 103 EEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDG 162
Query: 58 KISFREITHL 67
K+ E+ L
Sbjct: 163 KLELTEMARL 172
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 30 RMMEKLGAPQTHLGLKA--MIKEVDEDNDNKISFREITHL 67
RMM + LG A I+E D+D D+ ISF E +
Sbjct: 140 RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 18 GRDGFLDLEELKRMMEKLG-----APQTHLGLKAMIKEVDEDNDNKISFREITHLRKL 70
G+DG +D +EL+R + + G P + M+ +D D + F E L +
Sbjct: 44 GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 101
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 29 KRMMEKLGAPQTHLGLKAMIKEVDEDNDNKISFREI 64
K M E+L + GLK + K +D DN I+F E+
Sbjct: 11 KHMAERLSEEEIG-GLKELFKMIDTDNSGTITFDEL 45
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 18 GRDGFLDLEELKRMMEKLG-----APQTHLGLKAMIKEVDEDNDNKISFREITHLRKL 70
G+DG +D +EL+R + + G P + M+ +D D + F E L +
Sbjct: 44 GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 101
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 30 RMMEKLGAPQTHLGLKA--MIKEVDEDNDNKISFREITHL 67
RMM + LG A I+E D+D D+ ISF E +
Sbjct: 140 RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 18 GRDGFLDLEELKRMMEKLG-----APQTHLGLKAMIKEVDEDNDNKISFREITHLRKL 70
G+DG +D +EL+R + + G P + M+ +D D + F E L +
Sbjct: 13 GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.141 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,841,988
Number of Sequences: 62578
Number of extensions: 153711
Number of successful extensions: 803
Number of sequences better than 100.0: 207
Number of HSP's better than 100.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 527
Number of HSP's gapped (non-prelim): 312
length of query: 123
length of database: 14,973,337
effective HSP length: 85
effective length of query: 38
effective length of database: 9,654,207
effective search space: 366859866
effective search space used: 366859866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)