BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3151
(372 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/355 (60%), Positives = 261/355 (73%), Gaps = 25/355 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 118
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 179 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 214
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 215 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 274 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 333
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQIHIKSLINSKNPLLNKRRK 367
TPL T ++LKE +E W +V++EMT +LATMRVDY+QI IK + ++ NPLL KRRK
Sbjct: 334 TPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRK 388
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/355 (60%), Positives = 261/355 (73%), Gaps = 25/355 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 65 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 124
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 185 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 220
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 221 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 279
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 280 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 339
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQIHIKSLINSKNPLLNKRRK 367
TPL T ++LKE +E W +V++EMT +LATMRVDY+QI IK + ++ NPLL KRRK
Sbjct: 340 TPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRK 394
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/355 (60%), Positives = 261/355 (73%), Gaps = 25/355 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 74
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 135 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 170
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 171 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 229
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 230 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 289
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQIHIKSLINSKNPLLNKRRK 367
TPL T ++LKE +E W +V++EMT +LATMRVDY+QI IK + ++ NPLL KRRK
Sbjct: 290 TPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRK 344
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/355 (58%), Positives = 251/355 (70%), Gaps = 25/355 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK L D KARREVEL HIV
Sbjct: 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIV 118
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++ EC+ GGELF RIQ + D AFTEREA+ I I AI++LH
Sbjct: 119 RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 179 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 214
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD WSLGVI YILLCG+PPF+SNHG AISP
Sbjct: 215 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISP 273
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
G K RIR GQ++FPNPEW VS+E K LI+N+L +P++R TI + + WI Q +VPQ
Sbjct: 274 GXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQ 333
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQIHIKSLINSKNPLLNKRRK 367
TPL T ++LKE +E W +V++E T +LATMRVDY+QI IK + ++ NPLL KRRK
Sbjct: 334 TPLHTSRVLKEDKERWEDVKEEXTSALATMRVDYEQIKIKKIEDASNPLLLKRRK 388
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 423 bits (1088), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/337 (60%), Positives = 248/337 (73%), Gaps = 25/337 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 74
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 135 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 170
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 171 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 229
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 230 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 289
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQI 349
TPL T ++LKE +E W +V++EMT +LATMRVDY+QI
Sbjct: 290 TPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQI 326
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/337 (60%), Positives = 249/337 (73%), Gaps = 26/337 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
+ DDY +S ++LGLG+NGKVL+ ++T + ALK+L+D+ KAR+EV+ HIV
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIV 85
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+++G RCLL+IMECM GGELF RIQ++ D AFTEREAA IM +I +AI+FLH
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT +LKLTDFGFAK+
Sbjct: 146 SHNIAHRDVKPE------------------------NLLYTSKEKDAVLKLTDFGFAKET 181
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
N +LQTPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCGFPPF+SN GQAISP
Sbjct: 182 TQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 239
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIRLGQ+ FPNPEW VS++AK LI+ +L DP+ERLTI Q M + WI+Q VPQ
Sbjct: 240 GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 299
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQI 349
TPL T ++L+E ++ W EV++EMT +LATMRVDYDQ+
Sbjct: 300 TPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYDQV 336
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/337 (60%), Positives = 249/337 (73%), Gaps = 26/337 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
+ DDY +S ++LGLG+NGKVL+ ++T + ALK+L+D+ KAR+EV+ HIV
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIV 66
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+++G RCLL+IMECM GGELF RIQ++ D AFTEREAA IM +I +AI+FLH
Sbjct: 67 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT +LKLTDFGFAK+
Sbjct: 127 SHNIAHRDVKPE------------------------NLLYTSKEKDAVLKLTDFGFAKET 162
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
N +LQTPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCGFPPF+SN GQAISP
Sbjct: 163 TQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 220
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIRLGQ+ FPNPEW VS++AK LI+ +L DP+ERLTI Q M + WI+Q VPQ
Sbjct: 221 GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 280
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVDYDQI 349
TPL T ++L+E ++ W EV++EMT +LATMRVDYDQ+
Sbjct: 281 TPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYDQV 317
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/333 (60%), Positives = 243/333 (72%), Gaps = 25/333 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 72
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 133 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 168
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL PCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 169 TSHN-SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 227
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 228 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 287
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMRVD 345
TPL T ++LKE +E W +V++EMT +LATMRVD
Sbjct: 288 TPLHTSRVLKEDKERWEDVKEEMTSALATMRVD 320
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 25/331 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 13 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 72
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 133 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 168
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 169 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 227
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 228 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 287
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 288 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 318
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 25/331 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 79
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 140 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 175
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 176 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 234
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 235 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 294
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 295 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 325
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 25/331 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 78
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 139 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 174
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 175 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 233
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 234 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 293
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 294 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 324
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 25/331 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 29 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 88
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 89 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 149 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 184
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 185 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 243
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 244 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 303
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 304 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 334
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 25/331 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 14 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 73
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 134 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 169
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 170 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 228
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 229 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 288
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 289 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 319
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/331 (60%), Positives = 242/331 (73%), Gaps = 25/331 (7%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 80
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 81 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 141 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 176
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ SL TPCYTPYYVAPEVLGP+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 177 TSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 235
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 236 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 295
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 296 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 326
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/331 (54%), Positives = 222/331 (67%), Gaps = 46/331 (13%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIV 72
I DDY +++++LGLGINGKVLQI K+T E +ALK+L D KARREVEL HIV
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 74
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I DVYEN+Y G +CLL++MEC+ GGELF RIQ + D AFTEREA+ IM I AI++LH
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
NIAHRDVKPE NLLYT ILKLTDFGFAK+
Sbjct: 135 SINIAHRDVKPE------------------------NLLYTSKRPNAILKLTDFGFAKET 170
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
+KYDKSCD+WSLGVIMYILLCG+PPF+SNHG AISP
Sbjct: 171 TG----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 208
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
GMK RIR+GQ++FPNPEW VS+E K LI+N+L +P++R+TI + M + WI Q +VPQ
Sbjct: 209 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 268
Query: 313 TPLCTGKMLKEGEETWPEVQDEMTRSLATMR 343
TPL T ++LKE +E W +V++EMT +LATMR
Sbjct: 269 TPLHTSRVLKEDKERWEDVKEEMTSALATMR 299
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 172/299 (57%), Gaps = 33/299 (11%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVNIKDV 77
+ E +G+G + + V K T+ YA+KV+ + + E+E+ L G H +I+ +KDV
Sbjct: 30 VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y++ + + ++ E M GGEL +I +++ F+EREA+ +++ I +++LH Q +
Sbjct: 90 YDD----GKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
HRD+KP N+LY + G+ L++ DFGFAK++ +
Sbjct: 144 HRDLKPSNILYVD-----------------------ESGNPECLRICDFGFAKQLRAENG 180
Query: 198 SLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP-GMKN 256
L TPCYT +VAPEVL YD+ CDIWSLG+++Y +L G+ PF +G + +P +
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF--ANGPSDTPEEILT 238
Query: 257 RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPL 315
RI G+F W VS+ AK L+ ML VDP +RLT QV+++ W++Q +++PQ+ L
Sbjct: 239 RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 174/305 (57%), Gaps = 34/305 (11%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHI 71
D Y + E +G+G + + V K T+ YA+KV+ + + E+E+ L G H +I
Sbjct: 25 FSDGY-VVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNI 83
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ +KDVY++ + + ++ E M GGEL +I +++ F+EREA+ +++ I +++L
Sbjct: 84 ITLKDVYDD----GKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H Q + HRD+KP N+LY + G+ L++ DFGFAK+
Sbjct: 138 HSQGVVHRDLKPSNILYVD-----------------------ESGNPECLRICDFGFAKQ 174
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ + L TPCYT +VAPEVL YD+ CDIWSLG+++Y +L G+ PF +G + +
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF--ANGPSDT 232
Query: 252 P-GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQV 310
P + RI G+F W VS+ AK L+ ML VDP +RLT QV+++ W++Q +++
Sbjct: 233 PEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKL 292
Query: 311 PQTPL 315
PQ+ L
Sbjct: 293 PQSQL 297
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 180/313 (57%), Gaps = 39/313 (12%)
Query: 16 DYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVE---LQLAVGSHKHIV 72
D D+ + LG G + V KK+++ +A+K++ ++A + E L+L G H +IV
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG-HPNIV 69
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +V+ + + ++ME ++GGELF+RI++K+ F+E EA+ IM ++ SA+ +H
Sbjct: 70 KLHEVFHDQLH----TFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMH 123
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D + HRD+KPEN LL+T D +K+ DFGFA+
Sbjct: 124 DVGVVHRDLKPEN------------------------LLFTDENDNLEIKIIDFGFARLK 159
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
+ L+TPC+T +Y APE+L + YD+SCD+WSLGVI+Y +L G PF S H ++++
Sbjct: 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS-HDRSLTC 218
Query: 253 G----MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
+ +I+ G F F W++VSQEAK LI+ +L VDP++RL + + N+W+ +
Sbjct: 219 TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS 278
Query: 309 QVPQTPLCTGKML 321
Q+ PL T +L
Sbjct: 279 QLSSNPLMTPDIL 291
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 165/302 (54%), Gaps = 32/302 (10%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVN 73
D Y++ +I G+G + + K T+ +A+K++ + + E+E+ L G H +I+
Sbjct: 22 DGYEVKEDI-GVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+KDVY++ + + V+ E M GGEL +I +++ F+EREA+ ++ I +++LH
Sbjct: 81 LKDVYDD----GKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHA 134
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
Q + HRD+KP N+LY + G+ +++ DFGFAK++
Sbjct: 135 QGVVHRDLKPSNILYVD-----------------------ESGNPESIRICDFGFAKQLR 171
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
+ L TPCYT +VAPEVL YD +CDIWSLGV++Y +L G+ P F+N
Sbjct: 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP-FANGPDDTPEE 230
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT 313
+ RI G+F W VS AK L+ ML VDP +RLT V+ + WI ++Q+PQ
Sbjct: 231 ILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQY 290
Query: 314 PL 315
L
Sbjct: 291 QL 292
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 166/290 (57%), Gaps = 40/290 (13%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKAR-REVELQLAVGS---HKHIVNI 74
I E+LG G +V + ++ T +++ALK + + R +E ++AV H++IV +
Sbjct: 12 IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+D+YE+ + ++M+ + GGELF RI ++ G +TE++A++++ ++ SA+K+LH+
Sbjct: 72 EDIYESTTH----YYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KPENLLY P + + +TDFG K E GI
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ--------NGI-------------- 163
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ T C TP YVAPEVL Y K+ D WS+GVI YILLCG+PPF+ + +
Sbjct: 164 ----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY----EETESKL 215
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+I+ G ++F +P W+ +S+ AK I ++L DP+ER T ++ + + WI
Sbjct: 216 FEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 162/302 (53%), Gaps = 32/302 (10%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVN 73
D Y++ +I G+G + + K T+ +A+K++ + + E+E+ L G H +I+
Sbjct: 22 DGYEVKEDI-GVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+KDVY++ + + V+ E GGEL +I +++ F+EREA+ ++ I +++LH
Sbjct: 81 LKDVYDD----GKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHA 134
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
Q + HRD+KP N+LY + G+ +++ DFGFAK++
Sbjct: 135 QGVVHRDLKPSNILYVD-----------------------ESGNPESIRICDFGFAKQLR 171
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
+ L TPCYT +VAPEVL YD +CDIWSLGV++Y L G+ P F+N
Sbjct: 172 AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP-FANGPDDTPEE 230
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT 313
+ RI G+F W VS AK L+ L VDP +RLT V+ + WI ++Q+PQ
Sbjct: 231 ILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQY 290
Query: 314 PL 315
L
Sbjct: 291 QL 292
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 163/296 (55%), Gaps = 39/296 (13%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK---ARREVELQLAVGSHK 69
+ D +++ +E LG G V + +K T + YALKVL TV R E+ + L + SH
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRL-SHP 108
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIK 129
+I+ +K+++E S +++E + GGELF RI +K G ++ER+AA + +I A+
Sbjct: 109 NIIKLKEIFETPTEIS----LVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVA 162
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
+LH+ I HRD+KPEN LLY P LK+ DFG +
Sbjct: 163 YLHENGIVHRDLKPEN------------------------LLYATPAPDAPLKIADFGLS 198
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
K IV ++ ++T C TP Y APE+L Y D+WS+G+I YILLCGF PF+ G
Sbjct: 199 K-IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ 257
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
M RI ++ F +P W+ VS AK L++ ++ +DP +RLT Q +++ W++
Sbjct: 258 F---MFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 162/298 (54%), Gaps = 41/298 (13%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVG-----S 67
I+D YD ++LG G +V+ +K+T ++ A+K + +E ++ +
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +IV + D+YE+ L +IM+ + GGELF RI +K G +TER+A+ ++ ++ A
Sbjct: 75 HPNIVALDDIYES----GGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDA 128
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+K+LHD I HRD+KPEN LLY + + ++DFG
Sbjct: 129 VKYLHDLGIVHRDLKPEN------------------------LLYYSLDEDSKIMISDFG 164
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
+K + + L T C TP YVAPEVL Y K+ D WS+GVI YILLCG+PPF+ +
Sbjct: 165 LSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN- 222
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ +I +++F +P W+ +S AK I++++ DP +R T +Q +++ WI+
Sbjct: 223 ---DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 41/298 (13%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE--VELQLAVG---S 67
I+D YD ++LG G +V+ +K+T ++ A+K + +E +E ++AV
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +IV + D+YE+ L +IM+ + GGELF RI +K G +TER+A+ ++ ++ A
Sbjct: 75 HPNIVALDDIYES----GGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDA 128
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+K+LHD I HRD+KPEN LLY + + ++DFG
Sbjct: 129 VKYLHDLGIVHRDLKPEN------------------------LLYYSLDEDSKIMISDFG 164
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
+K + + L T C TP YVAPEVL Y K+ D WS+GVI YILLCG+PPF+ +
Sbjct: 165 LSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN- 222
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ +I +++F +P W+ +S AK I++++ DP +R T +Q +++ WI+
Sbjct: 223 ---DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 41/298 (13%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE--VELQLAVG---S 67
I+D YD ++LG G +V+ +K+T ++ A+K + +E +E ++AV
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +IV + D+YE+ L +IM+ + GGELF RI +K G +TER+A+ ++ ++ A
Sbjct: 75 HPNIVALDDIYES----GGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDA 128
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+K+LHD I HRD+KPEN LLY + + ++DFG
Sbjct: 129 VKYLHDLGIVHRDLKPEN------------------------LLYYSLDEDSKIMISDFG 164
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
+K + + L T C TP YVAPEVL Y K+ D WS+GVI YILLCG+PPF+ +
Sbjct: 165 LSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN- 222
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ +I +++F +P W+ +S AK I++++ DP +R T +Q +++ WI+
Sbjct: 223 ---DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 41/298 (13%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE--VELQLAVG---S 67
I+D YD ++LG G +V+ +K+T ++ A+K + +E +E ++AV
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +IV + D+YE+ L +IM+ + GGELF RI +K G +TER+A+ ++ ++ A
Sbjct: 75 HPNIVALDDIYES----GGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDA 128
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+K+LHD I HRD+KPEN LLY + + ++DFG
Sbjct: 129 VKYLHDLGIVHRDLKPEN------------------------LLYYSLDEDSKIMISDFG 164
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
+K + + L T C TP YVAPEVL Y K+ D WS+GVI YILLCG+PPF+ +
Sbjct: 165 LSK-MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN- 222
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ +I +++F +P W+ +S AK I++++ DP +R T +Q +++ WI+
Sbjct: 223 ---DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 44/290 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAVGSHKHIVNIKD 76
LG G G+VL +K T A+K++ T K EV + L + H +I+ + D
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAV-LKLLDHPNIMKLYD 103
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
+E+ R ++MEC GGELF I + F E +AA+I+ ++ S + +LH NI
Sbjct: 104 FFED----KRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNI 157
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KPENL LL +K D ++K+ DFG + + N+
Sbjct: 158 VHRDLKPENL-----------------------LLESKEKD-ALIKIVDFGLS-AVFENQ 192
Query: 197 ASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
++ T YY+APEVL KYD+ CD+WS+GVI++ILL G+PPF Q I
Sbjct: 193 KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL----R 247
Query: 257 RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
++ G++ F +PEW++VS+ AK LIK ML D R++ Q +E+ WI +
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 157/289 (54%), Gaps = 40/289 (13%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE--VELQLAVG---SHKHIVNIKD 76
E LG G +V+ EK T +++A+K + +E +E ++AV H++IV ++D
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
+YE+ L ++M+ + GGELF RI +K G +TE++A+ ++ ++ A+ +LH I
Sbjct: 88 IYES----PNHLYLVMQLVSGGELFDRIVEK--GFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KPEN LLY + + ++DFG +K +
Sbjct: 142 VHRDLKPEN------------------------LLYYSQDEESKIMISDFGLSK-MEGKG 176
Query: 197 ASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ T C TP YVAPEVL Y K+ D WS+GVI YILLCG+PPF+ + +
Sbjct: 177 DVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLF----E 232
Query: 257 RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+I +++F +P W+ +S AK I+N++ DP++R T +Q + WI+
Sbjct: 233 QILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 149/288 (51%), Gaps = 37/288 (12%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHD----TVKARREVELQLAVGSHKHIVNIKDVYE 79
LG G G+VL +K T A+K++ T + ++AV NI +YE
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ R ++ME GGELF I ++ F+E +AA+IM ++ S +LH NI HR
Sbjct: 72 -FFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+KPENL LL +K D ++K+ DFG + +
Sbjct: 129 DLKPENL-----------------------LLESKSRDA-LIKIVDFGLSAHFEVG-GKM 163
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
+ T YY+APEVL KYD+ CD+WS GVI+YILLCG+PPF Q I R+
Sbjct: 164 KERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL----KRVE 218
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQF 307
G+F F P+W VS EAK L+K ML +PS+R++ ++ + + WI +F
Sbjct: 219 KGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 266
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 149/288 (51%), Gaps = 37/288 (12%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHD----TVKARREVELQLAVGSHKHIVNIKDVYE 79
LG G G+VL +K T A+K++ T + ++AV NI +YE
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ R ++ME GGELF I ++ F+E +AA+IM ++ S +LH NI HR
Sbjct: 89 -FFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+KPENL LL +K D ++K+ DFG + +
Sbjct: 146 DLKPENL-----------------------LLESKSRDA-LIKIVDFGLSAHFEVG-GKM 180
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
+ T YY+APEVL KYD+ CD+WS GVI+YILLCG+PPF Q I R+
Sbjct: 181 KERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL----KRVE 235
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQF 307
G+F F P+W VS EAK L+K ML +PS+R++ ++ + + WI +F
Sbjct: 236 KGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 283
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 167/326 (51%), Gaps = 56/326 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-----HDTVKARREVELQLAVGS 67
+D Y +++E+LG G KV V + + YA+K++ H + REVE
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+K+I+ + + +E+ +R LV E + GG + IQ+++ F EREA+ ++ ++ +A
Sbjct: 70 NKNILELIEFFED---DTRFYLV-FEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAA 123
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ FLH + IAHRD+KPEN+L P +K+ DF D G
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDF----------------------DLG 161
Query: 188 FAKKIVSN-----KASLQTPCYTPYYVAPEVL-----GPDKYDKSCDIWSLGVIMYILLC 237
K+ ++ L TPC + Y+APEV+ YDK CD+WSLGV++YI+L
Sbjct: 162 SGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
Query: 238 GFPPFFSNHG-----------QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLC 286
G+PPF + G + + I+ G+++FP+ +W H+S EAK LI +L
Sbjct: 222 GYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLV 281
Query: 287 VDPSERLTIDQVMENKWISQFNQVPQ 312
D +RL+ QV+++ W+ Q P+
Sbjct: 282 RDAKQRLSAAQVLQHPWVQ--GQAPE 305
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 161/313 (51%), Gaps = 44/313 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-----HDTVKARREVELQLAVGS 67
+D Y + ++LG G + +V + TS+ YA+K++ H + REVE+
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H+ N+ ++ E R LV E M GG + I ++ F E EA++++ ++ SA
Sbjct: 70 HR---NVLELIEFFEEEDRFYLV-FEKMRGGSILSHIHKRRH--FNELEASVVVQDVASA 123
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ FLH++ IAHRD+KPEN+L P +K+ DF G G +KL G
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDF-------------GLGSGIKLN--G 168
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL-----GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
I + L TPC + Y+APEV+ YDK CD+WSLGVI+YILL G+PPF
Sbjct: 169 DCSPI--STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Query: 243 FSNHGQ-------AISPGMKN----RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
G P +N I+ G+++FP+ +W H+S AK LI +L D +
Sbjct: 227 VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQ 286
Query: 292 RLTIDQVMENKWI 304
RL+ QV+++ W+
Sbjct: 287 RLSAAQVLQHPWV 299
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 159/299 (53%), Gaps = 46/299 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNIK 75
+LG G G+VL+ ++ T + YA+KV++ DT REVEL L H +I+ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL-LKKLDHPNIMKLF 87
Query: 76 DVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
++ E+ S ++ E GGELF I +++ F+E +AA I+ ++ S I ++H N
Sbjct: 88 EILED----SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN 141
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
I HRD+KPEN+L L +K D I K+ DFG + N
Sbjct: 142 IVHRDLKPENIL-----------------------LESKEKDCDI-KIIDFGLSTCFQQN 177
Query: 196 KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF+ + I
Sbjct: 178 -TKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK--- 232
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTP 314
R+ G++ F P+W +S +AK LI+ ML PS R+T Q +E+ WI +++ +TP
Sbjct: 233 -RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS--SETP 288
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 44/293 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNIK 75
+LG G G+VL+ ++ T + YA+KV++ DT REVEL L H +I+ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL-LKKLDHPNIMKLF 87
Query: 76 DVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
++ E+ S ++ E GGELF I +++ F+E +AA I+ ++ S I ++H N
Sbjct: 88 EILED----SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN 141
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
I HRD+KPEN+L L +K D I K+ DFG + N
Sbjct: 142 IVHRDLKPENIL-----------------------LESKEKDCDI-KIIDFGLSTCFQQN 177
Query: 196 KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF+ + I
Sbjct: 178 -TKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---- 231
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
R+ G++ F P+W +S +AK LI+ ML PS R+T Q +E+ WI +++
Sbjct: 232 KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 44/313 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-----HDTVKARREVELQLAVGS 67
+D Y + ++LG G + +V + TS+ YA+K++ H + REVE+
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H+ N+ ++ E R LV E M GG + I ++ F E EA++++ ++ SA
Sbjct: 70 HR---NVLELIEFFEEEDRFYLV-FEKMRGGSILSHIHKRRH--FNELEASVVVQDVASA 123
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ FLH++ IAHRD+KPEN+L P +K+ DF D+ G +KL G
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDF-DL------------GSGIKLN--G 168
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL-----GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
I + L TPC + Y+APEV+ YDK CD+WSLGVI+YILL G+PPF
Sbjct: 169 DCSPI--STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Query: 243 FSNHGQ-------AISPGMKN----RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
G P +N I+ G+++FP+ +W H+S AK LI +L D +
Sbjct: 227 VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQ 286
Query: 292 RLTIDQVMENKWI 304
RL+ QV+++ W+
Sbjct: 287 RLSAAQVLQHPWV 299
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 44/293 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNIK 75
+LG G G+VL+ ++ T + YA+KV++ DT REVEL L H +I+ +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVEL-LKKLDHPNIMKLF 87
Query: 76 DVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
++ E+ S ++ E GGELF I +++ F+E +AA I+ ++ S I ++H N
Sbjct: 88 EILED----SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN 141
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
I HRD+KPEN+L L +K D I K+ DFG + N
Sbjct: 142 IVHRDLKPENIL-----------------------LESKEKDCDI-KIIDFGLSTCFQQN 177
Query: 196 KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF+ + I
Sbjct: 178 -TKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---- 231
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
R+ G++ F P+W +S +AK LI+ ML PS R+T Q +E+ WI +++
Sbjct: 232 KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 158/296 (53%), Gaps = 44/296 (14%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-----VLHDTVKARREVELQLAVGSHKHIVNIKDVY 78
+G G G+V V+K T A K + D + ++E+E+ ++ H +I+ + + +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETF 92
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
E+ + + ++ME GGELF+R+ K F E +AA IM ++ SA+ + H N+AH
Sbjct: 93 EDNTD----IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+KPEN L+ LTD D LKL DFG A + K
Sbjct: 147 RDLKPENFLF----------LTDSPD--------------SPLKLIDFGLAARFKPGKM- 181
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRI 258
++T TPYYV+P+VL Y CD WS GV+MY+LLCG+PPF + + +I
Sbjct: 182 MRTKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM----LKI 236
Query: 259 RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTP 314
R G F FP +W +VS +A++LI+ +L P +R+T Q +E++W + Q+ +P
Sbjct: 237 REGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK--QLSSSP 290
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 159/304 (52%), Gaps = 45/304 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGS 67
DDY + E LG G V + V+K ++ YA K+++ D K RE + +
Sbjct: 31 DDYQLFEE-LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI-CRLLK 88
Query: 68 HKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ +++I
Sbjct: 89 HPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVARE--YYSEADASHCIHQILE 141
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
++ +H +I HRD+KPEN LL G +KL DF
Sbjct: 142 SVNHIHQHDIVHRDLKPEN------------------------LLLASKCKGAAVKLADF 177
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G A ++ + + TP Y++PEVL D Y K DIW+ GVI+YILL G+PPF+
Sbjct: 178 GLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDED 237
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ +I+ G +DFP+PEW+ V+ EAK LI ML ++P++R+T DQ +++ W+ Q
Sbjct: 238 QHK----LYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQ 293
Query: 307 FNQV 310
+ V
Sbjct: 294 RSTV 297
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 158/298 (53%), Gaps = 43/298 (14%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-----VLHDTVKARREVELQLAVGSHKHIVNIKDVY 78
+G G G+V V+K T A K + D + ++E+E+ ++ H +I+ + + +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-DHPNIIRLYETF 75
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
E+ + + ++ME GGELF+R+ K F E +AA IM ++ SA+ + H N+AH
Sbjct: 76 EDNTD----IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+KPEN L+ LTD D LKL DFG A + K
Sbjct: 130 RDLKPENFLF----------LTDSPD--------------SPLKLIDFGLAARFKPGKM- 164
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRI 258
++T TPYYV+P+VL Y CD WS GV+MY+LLCG+PPF + + +I
Sbjct: 165 MRTKVGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM----LKI 219
Query: 259 RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS-QFNQVPQTPL 315
R G F FP +W +VS +A++LI+ +L P +R+T Q +E++W Q + P+ L
Sbjct: 220 REGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNLL 277
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 159/315 (50%), Gaps = 59/315 (18%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTV--KAR----------------REVELQLAV 65
LG G G+VL EK A+KV+ + K R E+ L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL-LKS 102
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
H +I+ + DV+E+ + ++ E GGELF++I + F E +AA IM +I
Sbjct: 103 LDHPNIIKLFDVFED----KKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQIL 156
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
S I +LH NI HRD+KPEN+L ++ +N L +K+ D
Sbjct: 157 SGICYLHKHNIVHRDIKPENIL-----------------LENKNSLLN-------IKIVD 192
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
FG + S L+ T YY+APEVL KY++ CD+WS GVIMYILLCG+PPF
Sbjct: 193 FGLSS-FFSKDYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ Q I ++ G++ F +W+++S EAK LIK ML D ++R T ++ + ++WI
Sbjct: 251 NDQDIIK----KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
Query: 306 QF----NQVPQTPLC 316
++ N+ Q LC
Sbjct: 307 KYANNINKSDQKTLC 321
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 159/306 (51%), Gaps = 46/306 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
D+YD+ E LG G V + V K T +A K+++ D K RE + +
Sbjct: 27 FSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 86 -QHPNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVARE--FYSEADASHCIQQI 137
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+I + H I HR++KPENL LL +K G +KL
Sbjct: 138 LESIAYCHSNGIVHRNLKPENL-----------------------LLASK-AKGAAVKLA 173
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A + V++ + TP Y++PEVL D Y K DIW+ GVI+YILL G+PPF+
Sbjct: 174 DFGLAIE-VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +D+P+PEW+ V+ EAK+LI +ML V+P +R+T DQ ++ WI
Sbjct: 233 EDQHRLYA----QIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
Query: 305 SQFNQV 310
+V
Sbjct: 289 CNRERV 294
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 159/306 (51%), Gaps = 46/306 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
D+YD+ E LG G V + V K T +A K+++ D K RE + +
Sbjct: 4 FSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 63 -QHPNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVARE--FYSEADASHCIQQI 114
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+I + H I HR++KPENL LL +K G +KL
Sbjct: 115 LESIAYCHSNGIVHRNLKPENL-----------------------LLASK-AKGAAVKLA 150
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A + V++ + TP Y++PEVL D Y K DIW+ GVI+YILL G+PPF+
Sbjct: 151 DFGLAIE-VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +D+P+PEW+ V+ EAK+LI +ML V+P +R+T DQ ++ WI
Sbjct: 210 EDQHR----LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
Query: 305 SQFNQV 310
+V
Sbjct: 266 CNRERV 271
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 159/306 (51%), Gaps = 46/306 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
D+YD+ E LG G V + V K T +A K+++ D K RE + +
Sbjct: 3 FSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 62 -QHPNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVARE--FYSEADASHCIQQI 113
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+I + H I HR++KPENL LL +K G +KL
Sbjct: 114 LESIAYCHSNGIVHRNLKPENL-----------------------LLASK-AKGAAVKLA 149
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A + V++ + TP Y++PEVL D Y K DIW+ GVI+YILL G+PPF+
Sbjct: 150 DFGLAIE-VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +D+P+PEW+ V+ EAK+LI +ML V+P +R+T DQ ++ WI
Sbjct: 209 EDQHR----LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
Query: 305 SQFNQV 310
+V
Sbjct: 265 CNRERV 270
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 157/300 (52%), Gaps = 46/300 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
D+YD+ E LG G V + V K T +A K+++ D K RE + +
Sbjct: 4 FSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 63 -QHPNIVRLHDSIQEESFH-----YLVFDLVTGGELFEDIVARE--FYSEADASHCIQQI 114
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+I + H I HR++KPENL LL +K G +KL
Sbjct: 115 LESIAYCHSNGIVHRNLKPENL-----------------------LLASK-AKGAAVKLA 150
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A + V++ + TP Y++PEVL D Y K DIW+ GVI+YILL G+PPF+
Sbjct: 151 DFGLAIE-VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +D+P+PEW+ V+ EAK+LI +ML V+P +R+T DQ ++ WI
Sbjct: 210 EDQHR----LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A+K++ + + RE + L V +
Sbjct: 7 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 66 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 116
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 162
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 163 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 212 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 268
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 269 EEALRHPWL 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A+K++ + + RE + L V +
Sbjct: 8 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 117
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 163
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 164 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 213 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 270 EEALRHPWL 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A+K++ + + RE + L V +
Sbjct: 8 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 117
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 163
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 164 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 213 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 270 EEALRHPWL 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A+K++ + + RE + L V +
Sbjct: 8 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 117
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 163
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 164 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 213 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 270 EEALRHPWL 278
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A+K++ + + RE + L V +
Sbjct: 14 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 73 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 123
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 169
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 170 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 219 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 275
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 276 EEALRHPWL 284
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 57/304 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------------ARREVELQLAVGSH 68
+++G G++ V + V + T +A+K++ T + RRE + V H
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 69 KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
HI+ + D YE+ S + ++ + M GELF + +K A +E+E IM + A+
Sbjct: 160 PHIITLIDSYES----SSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAV 213
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
FLH NI HRD+KPEN+L D ++L+DFGF
Sbjct: 214 SFLHANNIVHRDLKPENILL---------------------------DDNMQIRLSDFGF 246
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDK------YDKSCDIWSLGVIMYILLCGFPPF 242
+ + + L+ C TP Y+APE+L Y K D+W+ GVI++ LL G PPF
Sbjct: 247 SCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ H + I M I GQ+ F +PEW+ S K LI +L VDP RLT +Q +++
Sbjct: 306 W--HRRQIL--MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361
Query: 303 WISQ 306
+ +
Sbjct: 362 FFER 365
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 156/306 (50%), Gaps = 45/306 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
+ D+Y + E LG G V + ++ T + YA K+++ D K RE + +
Sbjct: 2 MTDEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI-CRL 59
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 60 LKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVARE--YYSEADASHCIQQI 112
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++ H I HRD+KPEN LL G +KL
Sbjct: 113 LESVNHCHLNGIVHRDLKPEN------------------------LLLASKSKGAAVKLA 148
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A ++ ++ + TP Y++PEVL D Y K D+W+ GVI+YILL G+PPF+
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +DFP+PEW+ V+ EAK LI ML ++P++R+T + +++ WI
Sbjct: 209 EDQHR----LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
Query: 305 SQFNQV 310
Q + V
Sbjct: 265 CQRSTV 270
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 156/306 (50%), Gaps = 45/306 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
+ D+Y + E LG G V + ++ T + YA K+++ D K RE + +
Sbjct: 2 MTDEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI-CRL 59
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 60 LKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVARE--YYSEADASHCIQQI 112
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++ H I HRD+KPEN LL G +KL
Sbjct: 113 LESVNHCHLNGIVHRDLKPEN------------------------LLLASKSKGAAVKLA 148
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A ++ ++ + TP Y++PEVL D Y K D+W+ GVI+YILL G+PPF+
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +DFP+PEW+ V+ EAK LI ML ++P++R+T + +++ WI
Sbjct: 209 EDQHR----LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
Query: 305 SQFNQV 310
Q + V
Sbjct: 265 CQRSTV 270
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A++++ + + RE + L V +
Sbjct: 147 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 205
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 206 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 256
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 257 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 302
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 303 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 352 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 408
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 409 EEALRHPWL 417
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 161/309 (52%), Gaps = 55/309 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD---TVKARREVELQLAVGS-- 67
++D+Y I ++ LG G G+V E+KT + A++++ + + RE + L V +
Sbjct: 133 LRDEY-IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 68 -------HKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA 118
H I+ IK+ + E+ Y +++E M GGELF ++ + E
Sbjct: 192 EILKKLNHPCIIKIKNFFDAEDYY-------IVLELMEGGELFDKVVG--NKRLKEATCK 242
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ A+++LH+ I HRD+KPEN+L + + ++K+TDFG
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH-------------- 288
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYIL 235
KI+ + ++T C TP Y+APEVL G Y+++ D WSLGVI++I
Sbjct: 289 -----------SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
L G+PP FS H +S +K++I G+++F W VS++A L+K +L VDP R T
Sbjct: 338 LSGYPP-FSEHRTQVS--LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 394
Query: 296 DQVMENKWI 304
++ + + W+
Sbjct: 395 EEALRHPWL 403
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 45/306 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAV 65
+ D+Y + +I G G V + V+ T YA K+++ D K RE + +
Sbjct: 2 MTDEYQLYEDI-GKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARI-CRL 59
Query: 66 GSHKHIVNIKD-VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +IV + D + E ++ ++ + + GGELF+ I +E ++E +A+ + +I
Sbjct: 60 LKHSNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVARE--YYSEADASHCIQQI 112
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
A+ H + HRD+KPEN LL G +KL
Sbjct: 113 LEAVLHCHQMGVVHRDLKPEN------------------------LLLASKCKGAAVKLA 148
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A ++ ++ + TP Y++PEVL + Y K DIW+ GVI+YILL G+PPF+
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWD 208
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ +I+ G +DFP+PEW+ V+ EAK LI ML ++P++R+T + +++ W+
Sbjct: 209 EDQHK----LYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
Query: 305 SQFNQV 310
Q + V
Sbjct: 265 CQRSTV 270
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 42/296 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNI 74
E LG G V + V+ + YA K+++ D K RE + + H +IV +
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI-CRLLKHPNIVRL 86
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
D G L I + + GGELF+ I +E ++E +A+ + +I A+ H
Sbjct: 87 HDSISE--EGHHYL--IFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM 140
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+KPEN LL G +KL DFG A ++
Sbjct: 141 GVVHRDLKPEN------------------------LLLASKLKGAAVKLADFGLAIEVEG 176
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ + TP Y++PEVL D Y K D+W+ GVI+YILL G+PPF+ +
Sbjct: 177 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR----L 232
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQV 310
+I+ G +DFP+PEW+ V+ EAK LI ML ++PS+R+T + +++ WIS + V
Sbjct: 233 YQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTV 288
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 45/295 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAVGSHKHIVNI 74
+LG G G+V+ +K T + A+KV+ D REV+L L H +I+ +
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL-LKQLDHPNIMKL 114
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +E+ ++ E GGELF I ++ F+E +AA I+ ++ S I ++H
Sbjct: 115 YEFFED----KGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 168
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KPENL LL +K D I ++ DFG + +
Sbjct: 169 KIVHRDLKPENL-----------------------LLESKSKDANI-RIIDFGLSTHFEA 204
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+K ++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF A +
Sbjct: 205 SK-KMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF----NGANEYDI 258
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
++ G++ F P+W+ VS+ AK LI+ ML PS R++ ++++WI + +
Sbjct: 259 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 313
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 45/295 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAVGSHKHIVNI 74
+LG G G+V+ +K T + A+KV+ D REV+L L H +I+ +
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL-LKQLDHPNIMKL 115
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +E+ ++ E GGELF I ++ F+E +AA I+ ++ S I ++H
Sbjct: 116 YEFFED----KGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 169
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KPENL LL +K D I ++ DFG + +
Sbjct: 170 KIVHRDLKPENL-----------------------LLESKSKDANI-RIIDFGLSTHFEA 205
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+K ++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF A +
Sbjct: 206 SK-KMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF----NGANEYDI 259
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
++ G++ F P+W+ VS+ AK LI+ ML PS R++ ++++WI + +
Sbjct: 260 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 314
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 45/295 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAVGSHKHIVNI 74
+LG G G+V+ +K T + A+KV+ D REV+L L H +I+ +
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL-LKQLDHPNIMKL 91
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +E+ ++ E GGELF I ++ F+E +AA I+ ++ S I ++H
Sbjct: 92 YEFFED----KGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 145
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KPENL LL +K D I ++ DFG + +
Sbjct: 146 KIVHRDLKPENL-----------------------LLESKSKDANI-RIIDFGLSTHFEA 181
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+K ++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF A +
Sbjct: 182 SK-KMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF----NGANEYDI 235
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
++ G++ F P+W+ VS+ AK LI+ ML PS R++ ++++WI + +
Sbjct: 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 290
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 45/295 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAVGSHKHIVNI 74
+LG G G+V+ +K T + A+KV+ D REV+L L H +I+ +
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL-LKQLDHPNIMKL 97
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +E+ ++ E GGELF I ++ F+E +AA I+ ++ S I ++H
Sbjct: 98 YEFFED----KGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 151
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KPENL LL +K D I ++ DFG + +
Sbjct: 152 KIVHRDLKPENL-----------------------LLESKSKDANI-RIIDFGLSTHFEA 187
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+K ++ T YY+APEVL YD+ CD+WS GVI+YILL G PPF A +
Sbjct: 188 SK-KMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF----NGANEYDI 241
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
++ G++ F P+W+ VS+ AK LI+ ML PS R++ ++++WI + +
Sbjct: 242 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK 296
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 43/303 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGS 67
++Y + E LG G V + V+ + YA +++ D K RE + +
Sbjct: 11 EEYQLFEE-LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI-CRLLK 68
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +IV + D G L I + + GGELF+ I +E ++E +A+ + +I A
Sbjct: 69 HPNIVRLHDSISE--EGHHYL--IFDLVTGGELFEDIVARE--YYSEADASHCIQQILEA 122
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ H + HR++KPENL LL +K G +KL DFG
Sbjct: 123 VLHCHQMGVVHRNLKPENL-----------------------LLASKL-KGAAVKLADFG 158
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
A ++ + + TP Y++PEVL D Y K D+W+ GVI+YILL G+PPF+
Sbjct: 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQF 307
+ +I+ G +DFP+PEW+ V+ EAK LI ML ++PS+R+T + +++ WIS
Sbjct: 219 HR----LYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274
Query: 308 NQV 310
+ V
Sbjct: 275 STV 277
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 5 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 62
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 120
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 153
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++T C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 214 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
Query: 305 SQFN 308
N
Sbjct: 265 LSIN 268
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 8 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 65
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 123
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 156
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++T C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 157 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 216
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 217 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
Query: 305 SQFN 308
N
Sbjct: 268 LSIN 271
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 5 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 62
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 120
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 153
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++T C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 214 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
Query: 305 SQFN 308
N
Sbjct: 265 LSIN 268
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 152/307 (49%), Gaps = 49/307 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQ 62
+D Y++ E++G G V + + ++T + +A+K++ T +RE +
Sbjct: 22 FEDVYEL-CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 63 LAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI--I 120
+ H HIV + + Y + L ++ E M G +L I ++ D F EA
Sbjct: 81 HML-KHPHIVELLETY----SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
M +I A+++ HD NI HRDVKPEN+L + +KL DFG + + G+ G+
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFG-------VAIQLGESGL 188
Query: 181 LKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
+ G TP+++APEV+ + Y K D+W GVI++ILL G
Sbjct: 189 VAGGRVG-----------------TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 231
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNP-EWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
PF+ + +K + ++ NP +W H+S+ AK L++ ML +DP+ER+T+ + +
Sbjct: 232 PFYGTKERLFEGIIKGKYKM------NPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 300 ENKWISQ 306
+ W+ +
Sbjct: 286 NHPWLKE 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 45/295 (15%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAVGSHKHIVNI 74
+LG G G+V+ +K T + A+KV+ D REV+L L H +I +
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL-LKQLDHPNIXKL 91
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +E+ ++ E GGELF I ++ F+E +AA I+ ++ S I + H
Sbjct: 92 YEFFED----KGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYXHKN 145
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KPENL LL +K D I ++ DFG + +
Sbjct: 146 KIVHRDLKPENL-----------------------LLESKSKDANI-RIIDFGLSTHFEA 181
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+K + T YY+APEVL YD+ CD+WS GVI+YILL G PPF A +
Sbjct: 182 SKKX-KDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPF----NGANEYDI 235
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
++ G++ F P+W+ VS+ AK LI+ L PS R++ ++++WI + +
Sbjct: 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTK 290
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 10 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 67
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 125
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 158
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 159 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 218
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 219 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
Query: 305 SQFN 308
N
Sbjct: 270 LSIN 273
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 5 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 62
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 120
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 153
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 214 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
Query: 305 SQFN 308
N
Sbjct: 265 LSIN 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 5 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 62
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 120
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 153
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 214 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
Query: 305 SQFN 308
N
Sbjct: 265 LSIN 268
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNI 74
+D+D ++LG G GKV+ + EK T YA+K+L V ++ E+ V + + N
Sbjct: 5 NDFDY-LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-EVAHTVTESRVLQNT 62
Query: 75 KDVY----ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ + + + L +ME +GGELF + ++ FTE A EI SA+++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEY 120
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH +++ +RD+K ENL+ K G +K+TDFG K
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGH---------------------------IKITDFGLCK 153
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ +S+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 154 EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWI 304
+ IR FP +S EAK+L+ +L DP +RL +VME+++
Sbjct: 214 FELILMEEIR-----FPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
Query: 305 SQFN 308
N
Sbjct: 265 LSIN 268
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 58/306 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT---------VKARRE-----VELQLAVGS 67
EILG G++ V + + K T + YA+K++ T V+ RE V++ V
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +I+ +KD YE + ++ + M GELF + +K +E+E IM +
Sbjct: 83 HPNIIQLKDTYET----NTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEV 136
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
I LH NI HRD+KPEN+L D +KLTDFG
Sbjct: 137 ICALHKLNIVHRDLKPENILL---------------------------DDDMNIKLTDFG 169
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL------GPDKYDKSCDIWSLGVIMYILLCGFPP 241
F+ ++ + L++ C TP Y+APE++ Y K D+WS GVIMY LL G PP
Sbjct: 170 FSCQLDPGE-KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F+ M I G + F +PEW+ S K L+ L V P +R T ++ + +
Sbjct: 229 FWHRKQML----MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284
Query: 302 KWISQF 307
+ Q+
Sbjct: 285 PFFQQY 290
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 58/306 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT---------VKARRE-----VELQLAVGS 67
EILG G++ V + + K T + YA+K++ T V+ RE V++ V
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +I+ +KD YE + ++ + M GELF + +K +E+E IM +
Sbjct: 83 HPNIIQLKDTYET----NTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEV 136
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
I LH NI HRD+KPEN+L D +KLTDFG
Sbjct: 137 ICALHKLNIVHRDLKPENILL---------------------------DDDMNIKLTDFG 169
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL------GPDKYDKSCDIWSLGVIMYILLCGFPP 241
F+ ++ + L+ C TP Y+APE++ Y K D+WS GVIMY LL G PP
Sbjct: 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F+ M I G + F +PEW+ S K L+ L V P +R T ++ + +
Sbjct: 229 FWHRKQML----MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284
Query: 302 KWISQF 307
+ Q+
Sbjct: 285 PFFQQY 290
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 141/306 (46%), Gaps = 58/306 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT---------VKARRE-----VELQLAVGS 67
EILG G++ V + + K T + YA+K++ T V+ RE V++ V
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +I+ +KD YE + ++ + M GELF + +K +E+E IM +
Sbjct: 70 HPNIIQLKDTYET----NTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEV 123
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
I LH NI HRD+KPEN+L D +KLTDFG
Sbjct: 124 ICALHKLNIVHRDLKPENILL---------------------------DDDMNIKLTDFG 156
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL------GPDKYDKSCDIWSLGVIMYILLCGFPP 241
F+ ++ + L+ C TP Y+APE++ Y K D+WS GVIMY LL G PP
Sbjct: 157 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F+ M I G + F +PEW+ S K L+ L V P +R T ++ + +
Sbjct: 216 FWHRKQML----MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 271
Query: 302 KWISQF 307
+ Q+
Sbjct: 272 PFFQQY 277
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 47/329 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL---HDTVKARREVELQ-LAVGSH 68
+ D YDI E LG G G V ++ E+ T +A K + H++ K E+Q ++V H
Sbjct: 49 VLDHYDIHEE-LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH 107
Query: 69 KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+VN+ D +E+ +++I E M GGELF+++ E +E EA M ++C +
Sbjct: 108 PTLVNLHDAFED----DNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGL 162
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
+H+ N H D+KPEN+++T TK + LKL DFG
Sbjct: 163 CHMHENNYVHLDLKPENIMFT-----------------------TKRSNE--LKLIDFGL 197
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ 248
+ K S++ T + APEV D+WS+GV+ YILL G PF G+
Sbjct: 198 TAHL-DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF---GGE 253
Query: 249 AISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
++N ++ ++ + + +S++ K I+ +L DP+ R+TI Q +E+ W++ N
Sbjct: 254 NDDETLRN-VKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 312
Query: 309 ------QVPQTPLCTGK-MLKEGEETWPE 330
Q+P + + +K + WPE
Sbjct: 313 APGRDSQIPSSRYTKIRDSIKTKYDAWPE 341
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 158/329 (48%), Gaps = 47/329 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL---HDTVKARREVELQ-LAVGSH 68
+ D YDI E LG G G V ++ E+ T +A K + H++ K E+Q ++V H
Sbjct: 155 VLDHYDIHEE-LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH 213
Query: 69 KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+VN+ D +E+ +++I E M GGELF+++ E +E EA M ++C +
Sbjct: 214 PTLVNLHDAFED----DNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGL 268
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
+H+ N H D+KPEN+++T K N L KL DFG
Sbjct: 269 CHMHENNYVHLDLKPENIMFT---------------TKRSNEL----------KLIDFGL 303
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ 248
+ K S++ T + APEV D+WS+GV+ YILL G PF G+
Sbjct: 304 TAHL-DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF---GGE 359
Query: 249 AISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
++N ++ ++ + + +S++ K I+ +L DP+ R+TI Q +E+ W++ N
Sbjct: 360 NDDETLRN-VKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 418
Query: 309 ------QVPQTPLCTGK-MLKEGEETWPE 330
Q+P + + +K + WPE
Sbjct: 419 APGRDSQIPSSRYTKIRDSIKTKYDAWPE 447
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 148/302 (49%), Gaps = 45/302 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAV 65
++D Y++ E LG G V + +K T + YA K + +R E+E ++ +
Sbjct: 3 VEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +I+ + D++EN + +++I+E + GGELF + +KE + TE EA +
Sbjct: 62 LREIRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKE--SLTEDEATQFLK 115
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIM-----------LLDKNVPNPR------------IK 152
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A KI + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 153 LIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
G+ + N I +DF + + S+ AK I+ +L DP R+TI Q +E+
Sbjct: 212 L---GETKQETLTN-ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267
Query: 303 WI 304
WI
Sbjct: 268 WI 269
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 45/303 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------ARREVELQLAV 65
++D YDI E LG G V + EK T YA K + +R E+E ++++
Sbjct: 10 VEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +++ + DVYEN + +++I+E + GGELF + QKE + +E EA +
Sbjct: 69 LRQVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIM-----------LLDKNIPIPH------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A +I + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ Q + + +DF + H S+ AK I+ +L + +RLTI + + +
Sbjct: 219 LGDTKQETLANITS----VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 303 WIS 305
WI+
Sbjct: 275 WIT 277
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 45/303 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------ARREVELQLAV 65
++D YDI E LG G V + EK T YA K + +R E+E ++++
Sbjct: 10 VEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +++ + DVYEN + +++I+E + GGELF + QKE + +E EA +
Sbjct: 69 LRQVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIM-----------LLDKNIPIPH------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A +I + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ Q + + +DF + H S+ AK I+ +L + +RLTI + + +
Sbjct: 219 LGDTKQETLANITSV----SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 303 WIS 305
WI+
Sbjct: 275 WIT 277
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 45/303 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------ARREVELQLAV 65
++D YDI E LG G V + EK T YA K + +R E+E ++++
Sbjct: 10 VEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +++ + DVYEN + +++I+E + GGELF + QKE + +E EA +
Sbjct: 69 LRQVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIM-----------LLDKNIPIPH------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A +I + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ Q + + +DF + H S+ AK I+ +L + +RLTI + + +
Sbjct: 219 LGDTKQETLANITS----VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 303 WIS 305
WI+
Sbjct: 275 WIT 277
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 49/310 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQ 62
+D Y++ E++G G V + + ++T + +A+K++ T +RE +
Sbjct: 24 FEDVYEL-CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 82
Query: 63 LAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI--I 120
+ H HIV + + Y + L ++ E M G +L I ++ D F EA
Sbjct: 83 HML-KHPHIVELLETYSS----DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
M +I A+++ HD NI HRDVKP +L + +KL FG + + G+ G+
Sbjct: 138 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG-------VAIQLGESGL 190
Query: 181 LKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
+ G TP+++APEV+ + Y K D+W GVI++ILL G
Sbjct: 191 VAGGRVG-----------------TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 233
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNP-EWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
PF+ + +K + ++ NP +W H+S+ AK L++ ML +DP+ER+T+ + +
Sbjct: 234 PFYGTKERLFEGIIKGKYKM------NPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 287
Query: 300 ENKWISQFNQ 309
+ W+ + ++
Sbjct: 288 NHPWLKERDR 297
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 49/307 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQ 62
+D Y++ E++G G V + + ++T + +A+K++ T +RE +
Sbjct: 22 FEDVYEL-CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 63 LAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI--I 120
+ H HIV + + Y + L ++ E M G +L I ++ D F EA
Sbjct: 81 HML-KHPHIVELLETY----SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
M +I A+++ HD NI HRDVKP +L + +KL FG + + G+ G+
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG-------VAIQLGESGL 188
Query: 181 LKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
+ G TP+++APEV+ + Y K D+W GVI++ILL G
Sbjct: 189 VAGGRVG-----------------TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 231
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNP-EWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
PF+ + +K + ++ NP +W H+S+ AK L++ ML +DP+ER+T+ + +
Sbjct: 232 PFYGTKERLFEGIIKGKYKM------NPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285
Query: 300 ENKWISQ 306
+ W+ +
Sbjct: 286 NHPWLKE 292
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 161/343 (46%), Gaps = 62/343 (18%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-----DTVKARREVELQLAVGS 67
+ D YDI E LG G G V + VEK T V+ K ++ D + E+ + +
Sbjct: 49 VYDYYDILEE-LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-H 106
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H ++N+ D +E+ Y +++I+E + GGELF RI ED +E E M + C
Sbjct: 107 HPKLINLHDAFEDKYE----MVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEG 161
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+K +H+ +I H D+KPEN++ + +K+ DFG L TK I+K+T
Sbjct: 162 LKHMHEHSIVHLDIKPENIM-CETKKASSVKIIDFG-------LATKLNPDEIVKVT--- 210
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
T + APE++ + D+W++GV+ Y+LL G PF G
Sbjct: 211 ---------------TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF---AG 252
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI--- 304
+ ++N ++ ++F + VS EAK IKN+L +P +RLT+ +E+ W+
Sbjct: 253 EDDLETLQN-VKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311
Query: 305 ----------SQFNQVPQTPLCTGKMLKEGEETWPEVQDEMTR 337
S++N++ Q +KE WP Q + R
Sbjct: 312 HSNLTSRIPSSRYNKIRQK-------IKEKYADWPAPQPAIGR 347
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 45/302 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAV 65
++D Y++ E LG G V + +K T + YA K + +R E+E ++ +
Sbjct: 24 VEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +I+ + D++EN + +++I+E + GGELF + +KE + TE EA +
Sbjct: 83 LREIRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKE--SLTEDEATQFLK 136
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIM-----------LLDKNVPNPR------------IK 173
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A KI + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 174 LIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
G+ + N I +DF + + S+ AK I+ +L DP R+ I Q +E+
Sbjct: 233 L---GETKQETLTN-ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 288
Query: 303 WI 304
WI
Sbjct: 289 WI 290
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 13 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 67
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E GE+++ +Q+ F E+ A + E+ +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL-ILEYAPRGEVYKELQKL--SKFDEQRTATYITELAN 124
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 157
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 158 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 216 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Query: 307 FNQVP 311
+ P
Sbjct: 268 NSSKP 272
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D+DI LG G G V E+++ + ALKVL T + RREVE+Q
Sbjct: 12 EDFDIGRP-LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ---- 66
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SRFDEQRTATYITELAN 123
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLL---------------------------GSNGELKIADF 156
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF ++
Sbjct: 157 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L + S+RLT+ +V+E+ WI
Sbjct: 215 YQETY----RRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
Query: 307 FNQVP 311
+ P
Sbjct: 267 NSSKP 271
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 147/302 (48%), Gaps = 45/302 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAV 65
++D Y++ E LG G V + +K T + YA K + +R E+E ++ +
Sbjct: 10 VEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +I+ + D++EN + +++I+E + GGELF + +KE + TE EA +
Sbjct: 69 LREIRHPNIITLHDIFENKTD----VVLILELVSGGELFDFLAEKE--SLTEDEATQFLK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIM-----------LLDKNVPNPR------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A KI + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
G+ + N I +DF + + S+ AK I+ +L DP R+ I Q +E+
Sbjct: 219 L---GETKQETLTN-ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 274
Query: 303 WI 304
WI
Sbjct: 275 WI 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 147/300 (49%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G+ V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 145/303 (47%), Gaps = 45/303 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------ARREVELQLAV 65
++D YDI E LG G V + EK T YA K + +R E+E ++++
Sbjct: 10 VEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +++ + DVYEN + +++I+E + GGELF + QKE + +E EA +
Sbjct: 69 LRQVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIM-----------LLDKNIPIPH------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A +I + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ Q I +DF + S+ AK I+ +L + +RLTI + + +
Sbjct: 219 LGDTKQETLAN----ITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 303 WIS 305
WI+
Sbjct: 275 WIT 277
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 147/298 (49%), Gaps = 50/298 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVL------HDTVKARREVELQLAVGSHKHIVNIK 75
E +G G KV T E+ A+K++ D + + E+E L H+HI +
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE-ALKNLRHQHICQLY 74
Query: 76 DVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
V E + + +++E GGELF I ++ +E E ++ +I SA+ ++H Q
Sbjct: 75 HVLET----ANKIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
AHRD+KPENLL+ + Y K LKL DFG K N
Sbjct: 129 YAHRDLKPENLLFDE---------------------YHK------LKLIDFGLCAKPKGN 161
Query: 196 K-ASLQTPCYTPYYVAPEVLGPDKYDKS-CDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
K LQT C + Y APE++ Y S D+WS+G+++Y+L+CGF PF ++ A+
Sbjct: 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY-- 219
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVP 311
+I G++D P+W +S + L++ ML VDP +R+++ ++ + WI Q P
Sbjct: 220 --KKIMRGKYDV--PKW--LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 145/303 (47%), Gaps = 45/303 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------ARREVELQLAV 65
++D YDI E LG G V + EK T YA K + +R E+E ++++
Sbjct: 10 VEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +++ + DVYEN + +++I+E + GGELF + QKE + +E EA +
Sbjct: 69 LRQVLHHNVITLHDVYENRTD----VVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIM-----------LLDKNIPIPH------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A +I + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ Q I +DF + S+ AK I+ +L + +RLTI + + +
Sbjct: 219 LGDTKQETLAN----ITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 303 WIS 305
WI+
Sbjct: 275 WIT 277
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 147/303 (48%), Gaps = 45/303 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAV 65
++D YDI E LG G V + EK T YA K + + +RR E+E ++++
Sbjct: 10 VEDFYDIGEE-LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 66 GS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
H +I+ + DVYEN + +++I+E + GGELF + QKE + +E EA +
Sbjct: 69 LRQVLHPNIITLHDVYENRTD----VVLILELVSGGELFDFLAQKE--SLSEEEATSFIK 122
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I + +LH + IAH D+KPEN++ L D P +K
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIM-----------LLDKNIPIPH------------IK 159
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
L DFG A +I + + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 LIDFGLAHEI-EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ Q I +DF + S+ AK I+ +L + +RLTI + + +
Sbjct: 219 LGDTKQETLAN----ITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 303 WIS 305
WI+
Sbjct: 275 WIT 277
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D+DI LG G G V E+++ + ALKVL T + RREVE+Q
Sbjct: 12 EDFDIGRP-LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ---- 66
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SRFDEQRTATYITELAN 123
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLL---------------------------GSNGELKIADF 156
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF ++
Sbjct: 157 GWSVHAPSSRRD--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L + S+RLT+ +V+E+ WI
Sbjct: 215 YQETY----RRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
Query: 307 FNQVP 311
+ P
Sbjct: 267 NSSKP 271
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 44/292 (15%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH----DTVKARREVELQLAVGSHKHIVNIKD 76
E LG G G V + VE + + Y K + D V ++E+ + L + H++I+++ +
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISI-LNIARHRNILHLHE 68
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF--TEREAAIIMNEICSAIKFLHDQ 134
+E++ L++I E + G ++F+RI AF ERE ++++C A++FLH
Sbjct: 69 SFESMEE----LVMIFEFISGLDIFERIN---TSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
NI H D++PEN++Y + +K+ +FG + KPGD L T
Sbjct: 122 NIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQ-----LKPGDNFRLLFT---------- 165
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
P Y APEV D + D+WSLG ++Y+LL G PF + Q I +
Sbjct: 166 ----------APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
N ++ F ++ +S EA + +L + R+T + +++ W+ Q
Sbjct: 216 MN----AEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 151/299 (50%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 62 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 178
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 179 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 211
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K + T C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ Q I
Sbjct: 212 V---KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQ 266
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+ +I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 267 --IYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 51/281 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAV------GSHKHIVNI 74
++LG G GKV+ + EK T YA+K+L + + A+ EV L H + +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH-D 133
K ++ L +ME +GGELF + ++ F+E A EI SA+ +LH +
Sbjct: 217 KYSFQT----HDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSE 270
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+N+ +RD+K ENL+ K G +K+TDFG K+ +
Sbjct: 271 KNVVYRDLKLENLMLDKDGH---------------------------IKITDFGLCKEGI 303
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAISP 252
+ A+++T C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 304 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 363
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ IR FP + EAK+L+ +L DP +RL
Sbjct: 364 ILMEEIR-----FPRT----LGPEAKSLLSGLLKKDPKQRL 395
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 51/281 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAV------GSHKHIVNI 74
++LG G GKV+ + EK T YA+K+L + + A+ EV L H + +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH-D 133
K ++ L +ME +GGELF + ++ F+E A EI SA+ +LH +
Sbjct: 214 KYSFQT----HDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSE 267
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+N+ +RD+K ENL+ K G +K+TDFG K+ +
Sbjct: 268 KNVVYRDLKLENLMLDKDGH---------------------------IKITDFGLCKEGI 300
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAISP 252
+ A+++T C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 360
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ IR FP + EAK+L+ +L DP +RL
Sbjct: 361 ILMEEIR-----FPRT----LGPEAKSLLSGLLKKDPKQRL 392
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 34 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 88
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 145
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 178
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 179 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 237 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
Query: 307 FNQVP 311
+ P
Sbjct: 289 NSSKP 293
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 25 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 79
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 136
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 169
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 170 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 227
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 228 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279
Query: 307 FNQVP 311
+ P
Sbjct: 280 NSSKP 284
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 7 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 61
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 118
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 151
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 152 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 209
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 210 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261
Query: 307 FNQVP 311
+ P
Sbjct: 262 NSSKP 266
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 13 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 67
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 124
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 157
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 158 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 216 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Query: 307 FNQVP 311
+ P
Sbjct: 268 NSSKP 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 11 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 65
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 155
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 156 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 214 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Query: 307 FNQVP 311
+ P
Sbjct: 266 NSSKP 270
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 12 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 66
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKLSK--FDEQRTATYITELAN 123
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 156
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 157 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 214
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 215 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266
Query: 307 FNQVP 311
+ P
Sbjct: 267 NSSKP 271
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 140/294 (47%), Gaps = 52/294 (17%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTV-KARREVELQLAVGSHKHIVN 73
+ LG+G GKV + T A+K+L+ D V K +RE++ L + H HI+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ-NLKLFRHPHIIK 75
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+ V + ++ME + GGELF I + G E EA + +I SA+ + H
Sbjct: 76 LYQVISTPTD----FFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHR 129
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+ HRD+KPEN+L + K+ DFG + ++
Sbjct: 130 HMVVHRDLKPENVLLDAHMNA---------------------------KIADFGLS-NMM 161
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ L+T C +P Y APEV+ Y DIWS GVI+Y LLCG PF H P
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----VP 217
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ +IR G F P E++++ TL+ +ML VDP +R TI + E++W Q
Sbjct: 218 TLFKKIRGGVFYIP----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 69 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 122
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 159
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 219 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 69 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 122
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 159
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 160 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 219 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 13 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 67
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 124
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 157
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE + +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 158 GWSVHAPSSRRT--TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 216 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPXLREVLEHPWITA 267
Query: 307 FNQVP 311
+ P
Sbjct: 268 NSSKP 272
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I+E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILILELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 51/281 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAV------GSHKHIVNI 74
++LG G GKV+ + EK T YA+K+L + + A+ EV L H + +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH-D 133
K ++ L +ME +GGELF + ++ F+E A EI SA+ +LH +
Sbjct: 74 KYSFQT----HDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSE 127
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+N+ +RD+K ENL+ K G +K+TDFG K+ +
Sbjct: 128 KNVVYRDLKLENLMLDKDGH---------------------------IKITDFGLCKEGI 160
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAISP 252
+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 161 KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 220
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ IR FP + EAK+L+ +L DP +RL
Sbjct: 221 ILMEEIR-----FPRT----LGPEAKSLLSGLLKKDPKQRL 252
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 146/299 (48%), Gaps = 53/299 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 11 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 65
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 155
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 156 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 214 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFA 299
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 51/281 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAV------GSHKHIVNI 74
++LG G GKV+ + EK T YA+K+L + + A+ EV L H + +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH-D 133
K ++ L +ME +GGELF + ++ F+E A EI SA+ +LH +
Sbjct: 75 KYSFQT----HDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSE 128
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+N+ +RD+K ENL+ K G +K+TDFG K+ +
Sbjct: 129 KNVVYRDLKLENLMLDKDGH---------------------------IKITDFGLCKEGI 161
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAISP 252
+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 162 KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 221
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ IR FP + EAK+L+ +L DP +RL
Sbjct: 222 ILMEEIR-----FPRT----LGPEAKSLLSGLLKKDPKQRL 253
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 139/281 (49%), Gaps = 51/281 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAV------GSHKHIVNI 74
++LG G GKV+ + EK T YA+K+L + + A+ EV L H + +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH-D 133
K ++ L +ME +GGELF + ++ F+E A EI SA+ +LH +
Sbjct: 76 KYSFQT----HDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSE 129
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+N+ +RD+K ENL+ K G +K+TDFG K+ +
Sbjct: 130 KNVVYRDLKLENLMLDKDGH---------------------------IKITDFGLCKEGI 162
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAISP 252
+ A+++ C TP Y+APEVL + Y ++ D W LGV+MY ++CG PF++ +H +
Sbjct: 163 KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 222
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ IR FP + EAK+L+ +L DP +RL
Sbjct: 223 ILMEEIR-----FPRT----LGPEAKSLLSGLLKKDPKQRL 254
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 9 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 63
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 120
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 153
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 154 GWSVHAPSSRRD--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 212 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Query: 307 FNQVP 311
+ P
Sbjct: 264 NSSKP 268
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 188 LKPENLLIDQQG---------------------------YIQVTDFGFAKRV---KGRTW 217
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ Q I + +I
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQ--IYEKIVS 273
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 274 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 42 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 158
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 191
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 192 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 249 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 160 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 189
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 245
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 246 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 291
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFGFAK++ K
Sbjct: 168 LKPENLMIDQQG---------------------------YIKVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
T C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 28 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 144
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 145 HSLDLIYRDLKPENLLID---------------------------EQGYIQVTDFGFAKR 177
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 178 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 235 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 285
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 153 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 182
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
T C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 238
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 239 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 284
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 42/295 (14%)
Query: 17 YDIS-TEILGLGINGKVLQIVEKKTSEVYALKVLHDT-VKARREVELQLAVGS---HKHI 71
Y +S TEILG G G+V + E T A K++ +K + EV+ +++V + H ++
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ + D +E+ + ++++ME + GGELF RI E TE + + M +IC I+ +
Sbjct: 149 IQLYDAFESKND----IVLVMEYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHM 203
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I H D+KPEN+L D +K+ DFG A++
Sbjct: 204 HQMYILHLDLKPENILCVNR-------------------------DAKQIKIIDFGLARR 238
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAI 250
+ L+ TP ++APEV+ D D+WS+GVI Y+LL G PF N + +
Sbjct: 239 -YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
N I ++D + E++ +S+EAK I +L + S R++ + +++ W+S
Sbjct: 298 -----NNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFA 298
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 11 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 65
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ +F
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIANF 155
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 156 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 214 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Query: 307 FNQVP 311
+ P
Sbjct: 266 NSSKP 270
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRA--ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 10 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 64
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 121
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ +F
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIANF 154
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 155 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 213 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
Query: 307 FNQVP 311
+ P
Sbjct: 265 NSSKP 269
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFAEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 145/299 (48%), Gaps = 53/299 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK+ + ALKVL + RREVE+Q
Sbjct: 5 EDFEIGRP-LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 59
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 116
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 149
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 150 GWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 207
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 208 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 11 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 65
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKLSK--FDEQRTATYITELAN 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 155
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 156 GWSVHAPSSRRA--ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 214 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Query: 307 FNQVP 311
+ P
Sbjct: 266 NSSKP 270
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L VN + E
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F E A +I ++LH ++ +RD
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 160 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 189
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 245
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 246 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 291
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 145/300 (48%), Gaps = 44/300 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKARR-----EVELQLAVG- 66
DDY + E LG G V + EK T YA K + T +RR ++E ++++
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 67 --SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +++ + +VYEN + +++I E + GGELF + +KE + TE EA + +I
Sbjct: 70 EIQHPNVITLHEVYENKTD----VILIGELVAGGELFDFLAEKE--SLTEEEATEFLKQI 123
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ + +LH IAH D+KPEN++ L D KP +K+
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIM-----------LLDRNVPKPR------------IKII 160
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A KI + TP +VAPE++ + D+WS+GVI YILL G PF
Sbjct: 161 DFGLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ Q + ++F + + + S AK I+ +L DP +R+TI +++ WI
Sbjct: 220 DTKQETLAN----VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRTXL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 144/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T YA+K+L V +++E L + VN + E
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L +++E GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +K+ DFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIKVADFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ Q I + +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQ--IYEKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 148/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 62 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F E A +I ++L
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYL 178
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 179 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 211
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ Q I
Sbjct: 212 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQ 266
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+ +I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 267 --IYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 36 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F E A +I ++L
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYL 152
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 153 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 185
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 186 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 243 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 293
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRT--ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T +A+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ Q I + +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQ--IYEKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 143/290 (49%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T +A+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + K+T +A+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ Q I + +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQ--IYEKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRT--DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 147/299 (49%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENL+ + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLIIDQQG---------------------------YIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 34 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 88
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 145
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 178
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 179 GWSVHAPSSRRD--DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 237 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
Query: 307 FNQVP 311
+ P
Sbjct: 289 NSSKP 293
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 9 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 63
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 120
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 153
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 154 GWSVHAPSSRRT--DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 212 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Query: 307 FNQVP 311
+ P
Sbjct: 264 NSSKP 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 13 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 67
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 124
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 157
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 158 GWSVHAPSSRRT--DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 216 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Query: 307 FNQVP 311
+ P
Sbjct: 268 NSSKP 272
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 139/294 (47%), Gaps = 52/294 (17%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTV-KARREVELQLAVGSHKHIVN 73
+ LG+G GKV + T A+K+L+ D V K +RE++ L + H HI+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ-NLKLFRHPHIIK 75
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+ V + ++ME + GGELF I + G E EA + +I SA+ + H
Sbjct: 76 LYQVISTPTD----FFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHR 129
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
+ HRD+KPEN+L + K+ DFG + ++
Sbjct: 130 HMVVHRDLKPENVLLDAHMNA---------------------------KIADFGLS-NMM 161
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
S+ L+ C +P Y APEV+ Y DIWS GVI+Y LLCG PF H P
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----VP 217
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ +IR G F P E++++ TL+ +ML VDP +R TI + E++W Q
Sbjct: 218 TLFKKIRGGVFYIP----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRT--DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRXXL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 10 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 64
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 121
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 154
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 155 GWSVHAPSSRRX--XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 213 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
Query: 307 FNQVP 311
+ P
Sbjct: 265 NSSKP 269
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 11 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 65
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 155
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 156 GWSVHAPSSRRD--DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 214 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Query: 307 FNQVP 311
+ P
Sbjct: 266 NSSKP 270
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK + + ALKVL + RREVE+Q
Sbjct: 8 EDFEIGRP-LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 62
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 119
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLL---------------------------GSAGELKIADF 152
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 153 GWSVHAPSSRRA--ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 211 YQ----DTYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Query: 307 FNQVP 311
+ P
Sbjct: 263 NSSKP 267
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFGFAK++ K
Sbjct: 168 LKPENLMIDQQG---------------------------YIKVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 13 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 67
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E GE+++ +Q+ F E+ A + E+ +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYL-ILEYAPRGEVYKELQKL--SKFDEQRTATYITELAN 124
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 157
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 158 GWSVHAPSSRRXXLXG--TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 216 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
Query: 307 FNQVP 311
+ P
Sbjct: 268 NSSKP 272
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 53/278 (19%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKAR-REVE------LQLAVGSHKHIVNIKD 76
LG G G+V I + YA+KVL + R ++VE L L++ +H I+ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
+++ ++ + +IM+ + GGELF +++ + F A E+C A+++LH ++I
Sbjct: 74 TFQD----AQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
+RD+KPEN+L K G +K+TDFGFAK +
Sbjct: 128 IYRDLKPENILLDK---------------------------NGHIKITDFGFAKYVPDVT 160
Query: 197 ASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFF-SNHGQAISPGMK 255
L C TP Y+APEV+ Y+KS D WS G+++Y +L G+ PF+ SN + +
Sbjct: 161 YXL---CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+R F +++ K L+ ++ D S+RL
Sbjct: 218 AELRFPPF---------FNEDVKDLLSRLITRDLSQRL 246
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFGFAK++ K
Sbjct: 168 LKPENLMIDQQG---------------------------YIKVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+AP ++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFGFAK++ K
Sbjct: 167 LKPENLMIDQQG---------------------------YIKVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 53/299 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 11 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 65
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 155
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ C T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 156 GWSVHAPSSRRX--XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 214 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 53/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
+D++I LG G G V EK++ + ALKVL + RREVE+Q
Sbjct: 9 EDFEIGRP-LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ---- 63
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH NI +Y ++ +R L I+E G +++ +Q+ F E+ A + E+ +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYL-ILEYAPLGTVYRELQKL--SKFDEQRTATYITELAN 120
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G G LK+ DF
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLL---------------------------GSAGELKIADF 153
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G++ S++ + T T Y+ PE++ +D+ D+WSLGV+ Y L G PPF +N
Sbjct: 154 GWSCHAPSSRRT--TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q RI +F FP+ V++ A+ LI +L +PS+R + +V+E+ WI+
Sbjct: 212 YQETY----KRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
Query: 307 FNQVP 311
+ P
Sbjct: 264 NSSKP 268
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++ ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFA 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFGFAK++ K
Sbjct: 168 LKPENLMIDQQG---------------------------YIKVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFGFAK++ K
Sbjct: 167 LKPENLMIDQQG---------------------------YIKVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ L TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 VKGRTWXLXG---TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F E A +I ++LH ++ +RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +++TDFGFAK++ K
Sbjct: 168 LKPENLLIDQQ---------------------------GYIQVTDFGFAKRV---KGRTW 197
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 253
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 254 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
+G G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME M GG++F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +K+ DFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIKVADFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
+G G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME M GG++F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +K+ DFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIKVADFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +E+E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +K+TDFG AK++ K
Sbjct: 167 LKPENLMIDQQG---------------------------YIKVTDFGLAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 49/299 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
D +D + LG G G+V+ + K++ YA+K+L V +++E L VN
Sbjct: 41 DQFD-RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 74 IKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ E + + L ++ME + GGE+F +++ G F+E A +I ++L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H ++ +RD+KPENLL + G +++TDFGFAK+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQ---------------------------GYIQVTDFGFAKR 190
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ K C TP +APE++ Y+K+ D W+LGV++Y + G+PPFF++ I
Sbjct: 191 V---KGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
+I G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 248 ----EKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +++TDFGFAK++ K
Sbjct: 167 LKPENLMIDQQG---------------------------YIQVTDFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
+G G G+V+ + +T YA+K+L V +++E L VN + E
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME + GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENLL + G +K+ DFGFAK++ K
Sbjct: 167 LKPENLLIDQQ---------------------------GYIKVADFGFAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 66/365 (18%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTV-KARREVELQLAVGSHKH 70
I + LG+G GKV + T A+K+L+ D V K RRE++ L + H H
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ-NLKLFRHPH 77
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
I+ + Y+ I S +V ME + GGELF I + +G E+E+ + +I S + +
Sbjct: 78 IIKL---YQVISTPSDIFMV-MEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDY 131
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KPEN+L + K+ DFG +
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNA---------------------------KIADFGLS- 163
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
++S+ L+ C +P Y APEV+ Y DIWS GVI+Y LLCG PF +H
Sbjct: 164 NMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--- 220
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ--- 306
P + +I G F P ++++ +L+K+ML VDP +R TI + E++W Q
Sbjct: 221 -VPTLFKKICDGIFYTP----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP 275
Query: 307 FNQVPQTPLCTGKM-----LKEGEETWPEVQDEMTRSLATMRVDYDQIHIKSLINSKNPL 361
P+ P + M LKE E + ++E+ L Y++ H L + + +
Sbjct: 276 KYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCL------YNRNHQDPLAVAYHLI 329
Query: 362 LNKRR 366
++ RR
Sbjct: 330 IDNRR 334
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 48/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVNIKDV--YEN 80
LG G G+V+ + +T YA+K+L V +E+E L VN + E
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + L ++ME GGE+F +++ G F+E A +I ++LH ++ +RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KPENL+ + G +++TDFG AK++ K
Sbjct: 167 LKPENLMIDQQG---------------------------YIQVTDFGLAKRV---KGRTW 196
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL 260
C TP Y+APE++ Y+K+ D W+LGV++Y + G+PPFF++ I +I
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY----EKIVS 252
Query: 261 GQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQVMENKWIS 305
G+ FP+ H S + K L++N+L VD ++R ++ + +KW +
Sbjct: 253 GKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVY--- 78
+++G G GKVL K YA+KVL +++ E + + + N+K +
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 79 -ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
+ + L +++ ++GGELF +Q++ F E A EI SA+ +LH NI
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIV 161
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
+RD+KPEN+L G + LTDFG K+ + + +
Sbjct: 162 YRDLKPENILLDSQGH---------------------------IVLTDFGLCKENIEHNS 194
Query: 198 SLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNR 257
+ T C TP Y+APEVL YD++ D W LG ++Y +L G PPF+S + + + N+
Sbjct: 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 254
Query: 258 -IRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI-DQVMENK 302
++L PN ++ A+ L++ +L D ++RL D ME K
Sbjct: 255 PLQLK----PN-----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQL----AVGSHKH 70
DD+DI LG G G V EK+ + ALKVL + + VE QL + SH
Sbjct: 14 DDFDIGRP-LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
NI +Y N ++ + + +++E GEL++ +Q+ G F E+ +A M E+ A+ +
Sbjct: 73 HPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHY 129
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H++ + HRD+KPENLL G G LK+ DFG++
Sbjct: 130 CHERKVIHRDIKPENLLM---------------------------GYKGELKIADFGWSV 162
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
S + C T Y+ PE++ +D+ D+W GV+ Y L G PPF S
Sbjct: 163 HAPSLRRRXM--CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------ 214
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ R+ D P + +S +K LI +L P +RL + VME+ W+
Sbjct: 215 PSHTETHRRIVNVDLKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQL----AVGSHKH 70
DD+DI LG G G V EK+ + ALKVL + + VE QL + SH
Sbjct: 15 DDFDIGRP-LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
NI +Y N ++ + + +++E GEL++ +Q+ G F E+ +A M E+ A+ +
Sbjct: 74 HPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHY 130
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H++ + HRD+KPENLL G G LK+ DFG++
Sbjct: 131 CHERKVIHRDIKPENLLM---------------------------GYKGELKIADFGWSV 163
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
S + C T Y+ PE++ +D+ D+W GV+ Y L G PPF S
Sbjct: 164 HAPSLRRRXM--CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------ 215
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ R+ D P + +S +K LI +L P +RL + VME+ W+
Sbjct: 216 PSHTETHRRIVNVDLKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQL----AVGSHKH 70
DD+DI LG G G V EK+ + ALKVL + + VE QL + SH
Sbjct: 14 DDFDI-VRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
NI +Y N ++ + + +++E GEL++ +Q+ G F E+ +A M E+ A+ +
Sbjct: 73 HPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHY 129
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H++ + HRD+KPENLL G G LK+ DFG++
Sbjct: 130 CHERKVIHRDIKPENLLM---------------------------GYKGELKIADFGWSV 162
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
S + C T Y+ PE++ +D+ D+W GV+ Y L G PPF S
Sbjct: 163 HAPSLRRRXM--CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------ 214
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ R+ D P + +S +K LI +L P +RL + VME+ W+
Sbjct: 215 PSHTETHRRIVNVDLKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 144/304 (47%), Gaps = 52/304 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ--------LAVG 66
DD I LG G G V +VE+++S + +V+ K R +V ++ L
Sbjct: 21 DDLFIFKRKLGSGAFGDV-HLVEERSSGLE--RVIKTINKDRSQVPMEQIEAEIEVLKSL 77
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRI--QQKEDGAFTEREAAIIMNEI 124
H +I+ I +V+E+ +N + ++ME GGEL +RI Q A +E A +M ++
Sbjct: 78 DHPNIIKIFEVFEDYHN----MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+A+ + H Q++ H+D+KPEN+L F D P + +K+
Sbjct: 134 MNALAYFHSQHVVHKDLKPENIL--------------FQDTSPHS----------PIKII 169
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A+ S++ S T Y+APEV D K CDIWS GV+MY LL G PF
Sbjct: 170 DFGLAELFKSDEHSTNAAG-TALYMAPEVFKRDVTFK-CDIWSAGVVMYFLLTGCLPFTG 227
Query: 245 NHGQAISPGMKNRIRLGQFDFPN--PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+ + + + PN E ++ +A L+K ML DP R + QV+ ++
Sbjct: 228 TSLEEVQ-------QKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280
Query: 303 WISQ 306
W Q
Sbjct: 281 WFKQ 284
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 151/347 (43%), Gaps = 83/347 (23%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQ 62
+Q Y + I G G G V +E +T + A+K+++ D + + EV L
Sbjct: 24 LQKKYHLKGAI-GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 63 LAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ---------------- 106
+ H NI +YE +Y + + ++ME HGG L ++
Sbjct: 83 KKL----HHPNIARLYE-VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 107 --------------------KEDGAFTEREAAI--IMNEICSAIKFLHDQNIAHRDVKPE 144
+E F +RE I IM +I SA+ +LH+Q I HRD+KPE
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N L++ I KL DFG K + K +G +T T
Sbjct: 198 NFLFSTNKSFEI-KLVDFGLSKE----FYKLNNGEYYGMT----------------TKAG 236
Query: 205 TPYYVAPEVLGP--DKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQAISPGMKNRIRLG 261
TPY+VAPEVL + Y CD WS GV++++LL G PF N IS + ++
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL--- 293
Query: 262 QFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
F NP + +S A+ L+ N+L + ER + +++ WISQF+
Sbjct: 294 --CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + V +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 59 KLFREVRI-MKVLNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GRMK 111
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-------------------- 151
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L T C +P Y APE+ KYD D+WSLGVI
Sbjct: 152 -------IKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++PS+
Sbjct: 203 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 254
Query: 292 RLTIDQVMENKWIS 305
R T++Q+M+++W++
Sbjct: 255 RGTLEQIMKDRWMN 268
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 44/253 (17%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + + +H +IV + +V E + L +IME GGE+F + G
Sbjct: 57 KLFREVRI-MKILNHPNIVKLFEVIET----EKTLYLIMEYASGGEVFDYLVAH--GRMK 109
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 110 EKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-------------------- 149
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVIM 232
+K+ DFGF+ + L T C +P Y APE+ KYD D+WSLGVI+
Sbjct: 150 -------IKIADFGFSNEFTVG-GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 233 YILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSER 292
Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++P +R
Sbjct: 202 YTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKR 253
Query: 293 LTIDQVMENKWIS 305
T++Q+M+++WI+
Sbjct: 254 GTLEQIMKDRWIN 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + V +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 59 KLFREVRI-MKVLNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GRMK 111
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-------------------- 151
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L T C +P Y APE+ KYD D+WSLGVI
Sbjct: 152 -------IKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++PS+
Sbjct: 203 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 254
Query: 292 RLTIDQVMENKWIS 305
R T++Q+M+++W++
Sbjct: 255 RGTLEQIMKDRWMN 268
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + V +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 59 KLFREVRI-MKVLNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GRMK 111
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-------------------- 151
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L T C +P Y APE+ KYD D+WSLGVI
Sbjct: 152 -------IKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++PS+
Sbjct: 203 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 254
Query: 292 RLTIDQVMENKWIS 305
R T++Q+M+++W++
Sbjct: 255 RGTLEQIMKDRWMN 268
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK----ARREVELQLAVGSHKH 70
D Y++ +I G G G + +K+ +E+ A+K + K +RE+ ++ H +
Sbjct: 19 DRYELVKDI-GAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSL-RHPN 76
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV K+V + L ++ME GGELF+RI G F+E EA ++ S + +
Sbjct: 77 IVRFKEVILTPTH----LAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSY 130
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H +AHRD+K EN L G P LK+ DFG++K
Sbjct: 131 AHAMQVAHRDLKLENTLLD-------------GSPAPR------------LKIADFGYSK 165
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
V + + ++ TP Y+APEVL +YD K D+WS GV +Y++L G PF +
Sbjct: 166 ASVLH-SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
K R+ + P++ H+S E + LI + DP++R++I ++ ++W
Sbjct: 223 PKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 130/254 (51%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + V +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 52 KLFREVRI-MKVLNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GWMK 104
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 105 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-------------------- 144
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L T C +P Y APE+ KYD D+WSLGVI
Sbjct: 145 -------IKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 195
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++PS+
Sbjct: 196 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 247
Query: 292 RLTIDQVMENKWIS 305
R T++Q+M+++W++
Sbjct: 248 RGTLEQIMKDRWMN 261
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 129/254 (50%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + V +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 59 KLFREVRI-MKVLNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GRMK 111
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-------------------- 151
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L C +P Y APE+ KYD D+WSLGVI
Sbjct: 152 -------IKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++PS+
Sbjct: 203 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 254
Query: 292 RLTIDQVMENKWIS 305
R T++Q+M+++W++
Sbjct: 255 RGTLEQIMKDRWMN 268
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + V +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 59 KLFREVRI-MKVLNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GRMK 111
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMN-------------------- 151
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L C P Y APE+ KYD D+WSLGVI
Sbjct: 152 -------IKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++PS+
Sbjct: 203 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSK 254
Query: 292 RLTIDQVMENKWIS 305
R T++Q+M+++W++
Sbjct: 255 RGTLEQIMKDRWMN 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 51/288 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ-------LAVGSHKHIVNIKD 76
LG G GKV T + ALK+++ V A+ +++ + L + H HI+ + D
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V I + ++VI G ELF I Q++ +E+EA +I SA+++ H I
Sbjct: 81 V---IKSKDEIIMVIEYA--GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KPENLL + + +K+ DFG + I+++
Sbjct: 134 VHRDLKPENLLLDEHLN---------------------------VKIADFGLS-NIMTDG 165
Query: 197 ASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
L+T C +P Y APEV+ Y D+WS GVI+Y++LC PF ++I K
Sbjct: 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFK 222
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKW 303
N I G + P + +S A LIK ML V+P R++I ++M++ W
Sbjct: 223 N-ISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 51/288 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ-------LAVGSHKHIVNIKD 76
LG G GKV T + ALK+++ V A+ +++ + L + H HI+ + D
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V I + ++VI G ELF I Q++ +E+EA +I SA+++ H I
Sbjct: 82 V---IKSKDEIIMVIEYA--GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KPENLL + + +K+ DFG + I+++
Sbjct: 135 VHRDLKPENLLLDEHLN---------------------------VKIADFGLS-NIMTDG 166
Query: 197 ASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
L+T C +P Y APEV+ Y D+WS GVI+Y++LC PF ++I K
Sbjct: 167 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFK 223
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKW 303
N I G + P + +S A LIK ML V+P R++I ++M++ W
Sbjct: 224 N-ISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 266
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD----TVKARREVELQLAVGSHKH 70
D Y++ +I G G G + +K+++E+ A+K + +RE+ ++ H +
Sbjct: 19 DRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL-RHPN 76
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV K+V + L ++ME GGELF+RI G F+E EA ++ S + +
Sbjct: 77 IVRFKEVILTPTH----LAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSY 130
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+K EN L G P LK+ DFG++K
Sbjct: 131 CHAMQVCHRDLKLENTLLD-------------GSPAPR------------LKICDFGYSK 165
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
V + T TP Y+APEVL +YD K D+WS GV +Y++L G PF +
Sbjct: 166 SSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
K R+ + P++ H+S E + LI + DP++R++I ++ ++W
Sbjct: 223 PKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 44/253 (17%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + + +H +IV + +V E + L +IME GGE+F + G
Sbjct: 60 KLFREVRI-MKILNHPNIVKLFEVIET----EKTLYLIMEYASGGEVFDYLVAH--GRMK 112
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 113 EKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN-------------------- 152
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVIM 232
+K+ DFGF+ + L C P Y APE+ KYD D+WSLGVI+
Sbjct: 153 -------IKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 233 YILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSER 292
Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K L ++P +R
Sbjct: 205 YTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKR 256
Query: 293 LTIDQVMENKWIS 305
T++Q+M+++WI+
Sbjct: 257 GTLEQIMKDRWIN 269
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 51/288 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ-------LAVGSHKHIVNIKD 76
LG G GKV T + ALK+++ V A+ +++ + L + H HI+ + D
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V I + ++VI G ELF I Q++ +E+EA +I SA+++ H I
Sbjct: 72 V---IKSKDEIIMVIEYA--GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KPENLL + + +K+ DFG + I+++
Sbjct: 125 VHRDLKPENLLLDEHLN---------------------------VKIADFGLS-NIMTDG 156
Query: 197 ASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
L+T C +P Y APEV+ Y D+WS GVI+Y++LC PF ++I K
Sbjct: 157 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFK 213
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKW 303
N I G + P + +S A LIK ML V+P R++I ++M++ W
Sbjct: 214 N-ISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 256
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 140/288 (48%), Gaps = 51/288 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ-------LAVGSHKHIVNIKD 76
LG G GKV T + ALK+++ V A+ +++ + L + H HI+ + D
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V I + ++VI G ELF I Q++ +E+EA +I SA+++ H I
Sbjct: 76 V---IKSKDEIIMVIEYA--GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KPENLL + + +K+ DFG + I+++
Sbjct: 129 VHRDLKPENLLLDEHLN---------------------------VKIADFGLS-NIMTDG 160
Query: 197 ASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
L+T C +P Y APEV+ Y D+WS GVI+Y++LC PF ++I K
Sbjct: 161 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF---DDESIPVLFK 217
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKW 303
N I G + P + +S A LIK ML V+P R++I ++M++ W
Sbjct: 218 N-ISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 260
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 56/284 (19%)
Query: 23 ILGLGINGKVLQIVE---KKTSEVYALKVLH---------DTVKARREVELQLAVGSHKH 70
+LG G GKV Q+ + T +++A+KVL DT + E + V H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPF 82
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV++ +Y G L +I+E + GGELF ++++ +G F E A + EI A+
Sbjct: 83 IVDL--IYAFQTGGK--LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGH 136
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH + I +RD+KPEN++ G +KLTDFG K
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGH---------------------------VKLTDFGLCK 169
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ + + T C T Y+APE+L ++++ D WSLG +MY +L G PPF N +
Sbjct: 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT 229
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
I +K ++ L + ++QEA+ L+K +L + + RL
Sbjct: 230 IDKILKCKLNLPPY---------LTQEARDLLKKLLKRNAASRL 264
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 41/295 (13%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK----ARREVELQLAVGSHKH 70
D Y++ +I G G G + +K+++E+ A+K + K +RE+ ++ H +
Sbjct: 18 DRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL-RHPN 75
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV K+V I + L ++ME GGELF+RI G F+E EA ++ S + +
Sbjct: 76 IVRFKEV---ILTPTH-LAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSY 129
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+K EN L G P LK+ DFG++K
Sbjct: 130 CHAMQVCHRDLKLENTLLD-------------GSPAPR------------LKICDFGYSK 164
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
V + T TP Y+APEVL +YD K D+WS GV +Y++L G PF +
Sbjct: 165 SSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 221
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
K R+ + P++ H+S E + LI + DP++R++I ++ ++W
Sbjct: 222 PKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 44/301 (14%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA---RREVELQLAV----GSHK 69
Y ++++ LG G V Q + K T + YA K L + R E+ ++AV S
Sbjct: 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIK 129
++N+ +VYEN + +++I+E GGE+F + +E + ++ +I +
Sbjct: 90 RVINLHEVYEN----TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
+LH NI H D+KP+N+L + + GD+ K+ DFG +
Sbjct: 146 YLHQNNIVHLDLKPQNILLS--------SIYPLGDI----------------KIVDFGMS 181
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
+KI + L+ TP Y+APE+L D + D+W++G+I Y+LL PF Q
Sbjct: 182 RKI-GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ- 239
Query: 250 ISPGMKNRIRLGQ--FDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQF 307
+ + + Q D+ + VSQ A I+++L +P +R T + + + W+ Q+
Sbjct: 240 -----ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294
Query: 308 N 308
+
Sbjct: 295 D 295
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 56/284 (19%)
Query: 23 ILGLGINGKVLQIVE---KKTSEVYALKVLH---------DTVKARREVELQLAVGSHKH 70
+LG G GKV Q+ + T +++A+KVL DT + E + V H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPF 82
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV++ +Y G L +I+E + GGELF ++++ +G F E A + EI A+
Sbjct: 83 IVDL--IYAFQTGGK--LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGH 136
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH + I +RD+KPEN++ G +KLTDFG K
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGH---------------------------VKLTDFGLCK 169
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-NHGQA 249
+ + + C T Y+APE+L ++++ D WSLG +MY +L G PPF N +
Sbjct: 170 ESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT 229
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
I +K ++ L + ++QEA+ L+K +L + + RL
Sbjct: 230 IDKILKCKLNLPPY---------LTQEARDLLKKLLKRNAASRL 264
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 131/278 (47%), Gaps = 47/278 (16%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAVGSHKHIVNIKDVYENI 81
+LG G GKV+ K+T ++YA+KVL D + +VE + + K I+++ + +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTM---TEKRILSLARNHPFL 86
Query: 82 YNGSRC------LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
C L +ME ++GG+L IQ+ F E A EI SA+ FLHD+
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG 144
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
I +RD+K +N+L G KL DFG K+ + N
Sbjct: 145 IIYRDLKLDNVLLDHEGH---------------------------CKLADFGMCKEGICN 177
Query: 196 KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
+ T C TP Y+APE+L Y + D W++GV++Y +LCG PF + + + +
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
Query: 256 NRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
N + P W H ++A ++K+ + +P+ RL
Sbjct: 238 ND------EVVYPTWLH--EDATGILKSFMTKNPTMRL 267
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK----ARREVELQLAVGSHKH 70
D Y++ +I G G G + +K+++E+ A+K + K +RE+ ++ H +
Sbjct: 19 DRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL-RHPN 76
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV K+V + L ++ME GGELF+RI G F+E EA ++ S + +
Sbjct: 77 IVRFKEVILTPTH----LAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSY 130
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+K EN L G P LK+ FG++K
Sbjct: 131 CHAMQVCHRDLKLENTLLD-------------GSPAPR------------LKICAFGYSK 165
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
V + T TP Y+APEVL +YD K D+WS GV +Y++L G PF +
Sbjct: 166 SSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
K R+ + P++ H+S E + LI + DP++R++I ++ ++W
Sbjct: 223 PKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK----ARREVELQLAVGSHKH 70
D Y++ +I G G G + +K+++E+ A+K + K +RE+ ++ H +
Sbjct: 19 DRYELVKDI-GSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL-RHPN 76
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
IV K+V + L ++ME GGELF+RI G F+E EA ++ S + +
Sbjct: 77 IVRFKEVILTPTH----LAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSY 130
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+K EN L G P LK+ FG++K
Sbjct: 131 CHAMQVCHRDLKLENTLLD-------------GSPAPR------------LKICAFGYSK 165
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
V + T TP Y+APEVL +YD K D+WS GV +Y++L G PF +
Sbjct: 166 SSVLHSQPKDT-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF--EDPEE 222
Query: 250 ISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
K R+ + P++ H+S E + LI + DP++R++I ++ ++W
Sbjct: 223 PKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 51/295 (17%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ-------LAVGSHKHI 71
I E LG G GKV KT + ALK + + + ++ ++ L + H HI
Sbjct: 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ + DV I + ++VI GGELF I +K+ TE E +I AI++
Sbjct: 72 IKLYDV---ITTPTDIVMVIEYA--GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYC 124
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I HRD+KPENLL D +K+ DFG +
Sbjct: 125 HRHKIVHRDLKPENLLL---------------------------DDNLNVKIADFGLS-N 156
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
I+++ L+T C +P Y APEV+ Y D+WS G+++Y++L G PF
Sbjct: 157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF----DDEF 212
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
P + ++ + P+ +S A++LI+ M+ DP +R+TI ++ + W +
Sbjct: 213 IPNLFKKVNSCVYVMPD----FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 50/292 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNIKD 76
+G G GK + + + Y +K ++ + ++RREV + LA H +IV ++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAV-LANMKHPNIVQYRE 90
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
+E NGS L ++M+ GG+LF+RI ++ F E + +IC A+K +HD+ I
Sbjct: 91 SFEE--NGS--LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+K +N+ TK G ++L DFG A +++++
Sbjct: 147 LHRDIKSQNIFLTK---------------------------DGTVQLGDFGIA-RVLNST 178
Query: 197 ASLQTPCY-TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
L C TPYY++PE+ Y+ DIW+LG ++Y LC F + MK
Sbjct: 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLY-ELCTLKHAFE------AGSMK 231
Query: 256 NRI-RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
N + ++ FP P H S + ++L+ + +P +R +++ ++E +I++
Sbjct: 232 NLVLKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 55/299 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLAVG 66
DD++I LG G G V EKK+ + ALKVL + + RRE+E+Q
Sbjct: 23 DDFEIGRP-LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ---- 77
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
+H H NI +Y Y+ R L I+E GEL++ +Q+ F E+ A IM E+
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYL-ILEYAPRGELYKELQK--SCTFDEQRTATIMEELAD 134
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ + H + + HRD+KPENLL G+ I DF
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGELKI---------------------------ADF 167
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS-N 245
G++ S + +T C T Y+ PE++ +++ D+W +GV+ Y LL G PPF S +
Sbjct: 168 GWSVHAPSLRR--KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESAS 225
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
H + RI FP V A+ LI +L +PSERL + QV + W+
Sbjct: 226 HNETY-----RRIVKVDLKFPAS----VPTGAQDLISKLLRHNPSERLPLAQVSAHPWV 275
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 50/292 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVL--------HDTVKARREVELQLAVGSHKHIVNI 74
LG G K +I + T EV+A K++ H K E+ + ++ +H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 82
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+E+ + + V++E L + K A TE EA + +I ++LH
Sbjct: 83 HGFFED----NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+K NL + D++ +K+ DFG A K+
Sbjct: 137 RVIHRDLKLGNLFLNE-------------DLE--------------VKIGDFGLATKVEY 169
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ +T C TP Y+APEVL + D+WS+G IMY LL G PPF ++ +
Sbjct: 170 DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--- 226
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
RI+ ++ P +H++ A +LI+ ML DP+ R TI++++ +++ +
Sbjct: 227 -LRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 50/292 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVL--------HDTVKARREVELQLAVGSHKHIVNI 74
LG G K +I + T EV+A K++ H K E+ + ++ +H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 86
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+E+ + + V++E L + K A TE EA + +I ++LH
Sbjct: 87 HGFFED----NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+K NL + D++ +K+ DFG A K+
Sbjct: 141 RVIHRDLKLGNLFLNE-------------DLE--------------VKIGDFGLATKVEY 173
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ +T C TP Y+APEVL + D+WS+G IMY LL G PPF ++ +
Sbjct: 174 DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--- 230
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
RI+ ++ P +H++ A +LI+ ML DP+ R TI++++ +++ +
Sbjct: 231 -LRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 277
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 50/292 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVL--------HDTVKARREVELQLAVGSHKHIVNI 74
LG G K +I + T EV+A K++ H K E+ + ++ +H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 82
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+E+ + + V++E L + K A TE EA + +I ++LH
Sbjct: 83 HGFFED----NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+K NL + D++ +K+ DFG A K+
Sbjct: 137 RVIHRDLKLGNLFLNE-------------DLE--------------VKIGDFGLATKVEY 169
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ +T C TP Y+APEVL + D+WS+G IMY LL G PPF ++ +
Sbjct: 170 DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--- 226
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
RI+ ++ P +H++ A +LI+ ML DP+ R TI++++ +++ +
Sbjct: 227 -LRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 142/310 (45%), Gaps = 63/310 (20%)
Query: 22 EILGLGINGKVL---QIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVY 78
++LG G GKV +I T ++YA+KVL ++ + +H + V
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK-------AKTTEHTRTERQVL 112
Query: 79 ENI------------YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
E+I + L +I++ ++GGELF + Q+E FTE E I + EI
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVL 170
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A++ LH I +RD+K EN+L G + LTDF
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGH---------------------------VVLTDF 203
Query: 187 GFAKKIVSNKASLQTP-CYTPYYVAPEVL--GPDKYDKSCDIWSLGVIMYILLCGFPPFF 243
G +K+ V+++ C T Y+AP+++ G +DK+ D WSLGV+MY LL G PF
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
Query: 244 SNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL-----TIDQV 298
+ + + RI + +P + +S AK LI+ +L DP +RL D++
Sbjct: 264 VDGEKNSQAEISRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEI 319
Query: 299 MENKWISQFN 308
E+ + + N
Sbjct: 320 KEHLFFQKIN 329
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 40/288 (13%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT--VKARREVELQLAVGSHKHIVNIKDV-Y 78
LG G K +I + T EV+A KV+ + +K ++ ++ + HK + N V +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
+ + V++E L + K A TE EA M + +++LH+ + H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+K NL L D DVK + DFG A KI +
Sbjct: 166 RDLKLGNLF-----------LNDDMDVK----------------IGDFGLATKIEFDGER 198
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRI 258
+T C TP Y+APEVL + DIWSLG I+Y LL G PPF S + I
Sbjct: 199 KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF------ETSCLKETYI 252
Query: 259 RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
R+ + ++ P H++ A LI+ ML DP+ R ++ +++ +++ +
Sbjct: 253 RIKKNEYSVP--RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 50/292 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVL--------HDTVKARREVELQLAVGSHKHIVNI 74
LG G K +I + T EV+A K++ H K E+ + ++ +H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 106
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+E+ + + V++E L + K A TE EA + +I ++LH
Sbjct: 107 HGFFED----NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+K NL + D++ +K+ DFG A K+
Sbjct: 161 RVIHRDLKLGNLFLNE-------------DLE--------------VKIGDFGLATKVEY 193
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ + C TP Y+APEVL + D+WS+G IMY LL G PPF ++ +
Sbjct: 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--- 250
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
RI+ ++ P +H++ A +LI+ ML DP+ R TI++++ +++ +
Sbjct: 251 -LRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 50/292 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVL--------HDTVKARREVELQLAVGSHKHIVNI 74
LG G K +I + T EV+A K++ H K E+ + ++ +H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 104
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+E+ + + V++E L + K A TE EA + +I ++LH
Sbjct: 105 HGFFED----NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+K NL + D++ +K+ DFG A K+
Sbjct: 159 RVIHRDLKLGNLFLNE-------------DLE--------------VKIGDFGLATKVEY 191
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ + C TP Y+APEVL + D+WS+G IMY LL G PPF ++ +
Sbjct: 192 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--- 248
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
RI+ ++ P +H++ A +LI+ ML DP+ R TI++++ +++ +
Sbjct: 249 -LRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 50/292 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVL--------HDTVKARREVELQLAVGSHKHIVNI 74
LG G K +I + T EV+A K++ H K E+ + ++ +H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 80
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+E+ + + V++E L + K A TE EA + +I ++LH
Sbjct: 81 HGFFED----NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
+ HRD+K NL + D++ +K+ DFG A K+
Sbjct: 135 RVIHRDLKLGNLFLNE-------------DLE--------------VKIGDFGLATKVEY 167
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ + C TP Y+APEVL + D+WS+G IMY LL G PPF ++ +
Sbjct: 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--- 224
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
RI+ ++ P +H++ A +LI+ ML DP+ R TI++++ +++ +
Sbjct: 225 -LRIKKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 46/252 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + V +H +IV + +V E + L ++ E GGE+F + G
Sbjct: 59 KLFREVRIX-KVLNHPNIVKLFEVIET----EKTLYLVXEYASGGEVFDYLVAH--GRXK 111
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL +
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXN-------------------- 151
Query: 174 KPGDGGILKLTDFGFAKKIV-SNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + NK L C P Y APE+ KYD D+WSLGVI
Sbjct: 152 -------IKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P + S + + L+K L ++PS+
Sbjct: 203 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YXSTDCENLLKKFLILNPSK 254
Query: 292 RLTIDQVMENKW 303
R T++Q+ +++W
Sbjct: 255 RGTLEQIXKDRW 266
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 56/302 (18%)
Query: 22 EILGLGINGKVL---QIVEKKTSEVYALKVL-------HDTVKARREVELQLAVGSHKHI 71
++LG G GKV +I ++YA+KVL D V+ + E ++ + V +H I
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFI 89
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
V + ++ L +I++ + GG+LF R+ + + FTE + + E+ A+ L
Sbjct: 90 VKLHYAFQT----EGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHL 143
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I +RD+KPEN+L + G +KLTDFG +K+
Sbjct: 144 HSLGIIYRDLKPENILLDEEGH---------------------------IKLTDFGLSKE 176
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAI 250
+ ++ + C T Y+APEV+ + +S D WS GV+M+ +L G PF + + +
Sbjct: 177 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM 236
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI--DQVMENKWISQFN 308
+ +K ++ + QF +S EA++L++ + +P+ RL D V E K S F+
Sbjct: 237 TMILKAKLGMPQF---------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 287
Query: 309 QV 310
+
Sbjct: 288 TI 289
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 49/290 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V EK + A+K++ + RRE+ V ++H N+ ++Y++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF-NVVEMYKSY 111
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + Q E + A + + A+ +LH Q + HRD+
Sbjct: 112 LVGEE-LWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF +I + +
Sbjct: 168 KSDSILLTLDGR---------------------------VKLSDFGFCAQISKDVPKRKX 200
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP--GMKNRIR 259
TPY++APEV+ Y DIWSLG+++ ++ G PP+FS+ SP MK R+R
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-----SPVQAMK-RLR 254
Query: 260 LGQFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
D P P+ ++ VS + ++ ML DP ER T +++++ ++ Q
Sbjct: 255 ----DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 56/302 (18%)
Query: 22 EILGLGINGKVL---QIVEKKTSEVYALKVL-------HDTVKARREVELQLAVGSHKHI 71
++LG G GKV +I ++YA+KVL D V+ + E ++ + V +H I
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFI 88
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
V + ++ L +I++ + GG+LF R+ + + FTE + + E+ A+ L
Sbjct: 89 VKLHYAFQT----EGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHL 142
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I +RD+KPEN+L + G +KLTDFG +K+
Sbjct: 143 HSLGIIYRDLKPENILLDEEGH---------------------------IKLTDFGLSKE 175
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAI 250
+ ++ + C T Y+APEV+ + +S D WS GV+M+ +L G PF + + +
Sbjct: 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM 235
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI--DQVMENKWISQFN 308
+ +K ++ + QF +S EA++L++ + +P+ RL D V E K S F+
Sbjct: 236 TMILKAKLGMPQF---------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 286
Query: 309 QV 310
+
Sbjct: 287 TI 288
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 56/302 (18%)
Query: 22 EILGLGINGKVL---QIVEKKTSEVYALKVL-------HDTVKARREVELQLAVGSHKHI 71
++LG G GKV +I ++YA+KVL D V+ + E ++ + V +H I
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-NHPFI 88
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
V + ++ L +I++ + GG+LF R+ + + FTE + + E+ A+ L
Sbjct: 89 VKLHYAFQT----EGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHL 142
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I +RD+KPEN+L + G +KLTDFG +K+
Sbjct: 143 HSLGIIYRDLKPENILLDEEGH---------------------------IKLTDFGLSKE 175
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAI 250
+ ++ + C T Y+APEV+ + +S D WS GV+M+ +L G PF + + +
Sbjct: 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETM 235
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI--DQVMENKWISQFN 308
+ +K ++ + QF +S EA++L++ + +P+ RL D V E K S F+
Sbjct: 236 TMILKAKLGMPQF---------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 286
Query: 309 QV 310
+
Sbjct: 287 TI 288
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 133/254 (52%), Gaps = 46/254 (18%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
K REV + + + +H +IV + +V E + L ++ME GGE+F + G
Sbjct: 60 KLFREVRI-MKILNHPNIVKLFEVIET----EKTLYLVMEYASGGEVFDYLVAH--GRMK 112
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
E+EA +I SA+++ H + I HRD+K ENLL GD+
Sbjct: 113 EKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLD-------------GDMN------- 152
Query: 174 KPGDGGILKLTDFGFAKKI-VSNKASLQTPCYTPYYVAPEVLGPDKYDK-SCDIWSLGVI 231
+K+ DFGF+ + V NK L T C +P Y APE+ KYD D+WSLGVI
Sbjct: 153 -------IKIADFGFSNEFTVGNK--LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+Y L+ G PF GQ + ++ R+ G++ P ++S + + L+K +L ++P +
Sbjct: 204 LYTLVSGSLPF---DGQNLKE-LRERVLRGKYRIPF----YMSTDCENLLKKLLVLNPIK 255
Query: 292 RLTIDQVMENKWIS 305
R +++Q+M+++W++
Sbjct: 256 RGSLEQIMKDRWMN 269
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT--VKARREVELQLAVGSHKHIVNIKDV-Y 78
LG G K +I + T EV+A KV+ + +K ++ ++ + HK + N V +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
+ + V++E L + K A TE EA M + +++LH+ + H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+K NL L D DVK + DFG A KI +
Sbjct: 166 RDLKLGNLF-----------LNDDMDVK----------------IGDFGLATKIEFDGER 198
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRI 258
+ C TP Y+APEVL + DIWSLG I+Y LL G PPF S + I
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF------ETSCLKETYI 252
Query: 259 RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
R+ + ++ P H++ A LI+ ML DP+ R ++ +++ +++ +
Sbjct: 253 RIKKNEYSVP--RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT--VKARREVELQLAVGSHKHIVNIKDV-Y 78
LG G K +I + T EV+A KV+ + +K ++ ++ + HK + N V +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
+ + V++E L + K A TE EA M + +++LH+ + H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+K NL L D DVK + DFG A KI +
Sbjct: 166 RDLKLGNLF-----------LNDDMDVK----------------IGDFGLATKIEFDGER 198
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRI 258
+ C TP Y+APEVL + DIWSLG I+Y LL G PPF S + I
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF------ETSCLKETYI 252
Query: 259 RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
R+ + ++ P H++ A LI+ ML DP+ R ++ +++ +++ +
Sbjct: 253 RIKKNEYSVP--RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT--VKARREVELQLAVGSHKHIVNIKDV-Y 78
LG G K +I + T EV+A KV+ + +K ++ ++ + HK + N V +
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
+ + V++E L + K A TE EA M + +++LH+ + H
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 149
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+K NL L D DVK + DFG A KI +
Sbjct: 150 RDLKLGNLF-----------LNDDMDVK----------------IGDFGLATKIEFDGER 182
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRI 258
+ C TP Y+APEVL + DIWSLG I+Y LL G PPF S + I
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF------ETSCLKETYI 236
Query: 259 RLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
R+ + ++ P H++ A LI+ ML DP+ R ++ +++ +++ +
Sbjct: 237 RIKKNEYSVP--RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTS 282
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 146/340 (42%), Gaps = 57/340 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHI 71
D YD +I G G G + +K T E+ A+K + V+ ++ H +I
Sbjct: 20 DRYDFVKDI-GSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNI 78
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
V K+V + L +IME GGEL++RI G F+E EA ++ S + +
Sbjct: 79 VRFKEVILTPTH----LAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYC 132
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I HRD+K EN L G P LK+ DFG++K
Sbjct: 133 HSMQICHRDLKLENTLLD-------------GSPAPR------------LKICDFGYSKS 167
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
V + T TP Y+APEVL +YD K D+WS GV +Y++L G PF +
Sbjct: 168 SVLHSQPKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF--EDPEEP 224
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI------ 304
K R+ + P+ +S E LI + DP+ R++I ++ + W
Sbjct: 225 RDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPA 284
Query: 305 ---------SQFNQVPQTPLCTGKMLKE--GEETWPEVQD 333
SQF Q P+ P+ + + + E T P V++
Sbjct: 285 DLMNESNTGSQF-QEPEQPMQSLDTIMQIISEATIPAVRN 323
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 52/282 (18%)
Query: 22 EILGLGINGKVL---QIVEKKTSEVYALKVLHD-TVKARREVELQ-----LAVGSHKHIV 72
++LG G GKV ++ + +YA+KVL T+K R V + LA +H +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ ++ L +I++ + GG+LF R+ + + FTE + + E+ + LH
Sbjct: 94 KLHYAFQT----EGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALGLDHLH 147
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I +RD+KPEN+L + G +KLTDFG +K+
Sbjct: 148 SLGIIYRDLKPENILLDEEGH---------------------------IKLTDFGLSKEA 180
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAIS 251
+ ++ + C T Y+APEV+ + S D WS GV+M+ +L G PF + + ++
Sbjct: 181 IDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMT 240
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+K ++ + QF +S EA++L++ + +P+ RL
Sbjct: 241 LILKAKLGMPQF---------LSTEAQSLLRALFKRNPANRL 273
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 52/290 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLA-------VG 66
+D+++ ++LG G GKV KKT++ +A+K L D V +VE +
Sbjct: 18 EDFELH-KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
H + ++ ++ N L +ME ++GG+L IQ F A EI
Sbjct: 77 EHPFLTHMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIIL 130
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
++FLH + I +RD+K +N+L K G +K+ DF
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKDGH---------------------------IKIADF 163
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
G K+ + A C TP Y+APE+L KY+ S D WS GV++Y +L G PF H
Sbjct: 164 GMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF---H 220
Query: 247 GQAISPGMKNRIRLGQFDFP-NPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
GQ + + IR+ D P P W + +EAK L+ + +P +RL +
Sbjct: 221 GQD-EEELFHSIRM---DNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV 264
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 51/286 (17%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLA-------VGSHKH 70
I ++LG G GKV KKT++ +A+K L D V +VE + H
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
+ ++ ++ N L +ME ++GG+L IQ F A EI ++F
Sbjct: 80 LTHMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQF 133
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
LH + I +RD+K +N+L K G +K+ DFG K
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGH---------------------------IKIADFGMCK 166
Query: 191 KIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
+ + A C TP Y+APE+L KY+ S D WS GV++Y +L G PF HGQ
Sbjct: 167 ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF---HGQD- 222
Query: 251 SPGMKNRIRLGQFDFP-NPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
+ + IR+ D P P W + +EAK L+ + +P +RL +
Sbjct: 223 EEELFHSIRM---DNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV 263
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 49/279 (17%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLAVGSHKHIVNIKDVYENI 81
+LG G GKV+ K T E+YA+K+L D V +VE + K ++ + D +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMV---EKRVLALLDKPPFL 82
Query: 82 YNGSRC------LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
C L +ME ++GG+L IQQ G F E +A EI + FLH +
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISIGLFFLHKRG 140
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
I +RD+K +N++ G +K+ DFG K+ + +
Sbjct: 141 IIYRDLKLDNVMLDSEGH---------------------------IKIADFGMCKEHMMD 173
Query: 196 KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAISPGM 254
+ + C TP Y+APE++ Y KS D W+ GV++Y +L G PPF + + M
Sbjct: 174 GVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
++ + +P + +S+EA ++ K ++ P++RL
Sbjct: 234 EHNV-----SYP----KSLSKEAVSICKGLMTKHPAKRL 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
N + S + +++E H GE+ R + F+E EA M++I + + +LH I HR
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHR 136
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+ NLL T+ + +K+ DFG A ++
Sbjct: 137 DLTLSNLLLTRNMN---------------------------IKIADFGLATQLKMPHEKH 169
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
T C TP Y++PE+ + D+WSLG + Y LL G PPF ++ N++
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD----TVKNTLNKVV 225
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
L ++ P+ +S EAK LI +L +P++RL++ V+++ ++S+
Sbjct: 226 LADYEMPS----FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 55/293 (18%)
Query: 16 DYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQLAV 65
D+D+ ++G G KVL + KKT +YA++V+ D V+ + V Q +
Sbjct: 53 DFDL-LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS- 110
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+H +V + ++ SR VI E ++GG+L +Q++ E A EI
Sbjct: 111 -NHPFLVGLHSCFQT---ESRLFFVI-EYVNGGDLMFHMQRQR--KLPEEHARFYSAEIS 163
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
A+ +LH++ I +RD+K +N+L G +KLTD+G K E L +PGD
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGH---IKLTDYGMCK-EGL---RPGD-------- 208
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF--- 242
+ T C TP Y+APE+L + Y S D W+LGV+M+ ++ G PF
Sbjct: 209 ------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
Query: 243 --FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
N Q + I Q P +S +A +++K+ L DP ERL
Sbjct: 257 GSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERL 305
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 55/293 (18%)
Query: 16 DYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQLAV 65
D+D+ ++G G KVL + KKT +YA+KV+ D V+ + V Q +
Sbjct: 21 DFDL-LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS- 78
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+H +V + ++ SR VI E ++GG+L +Q++ E A EI
Sbjct: 79 -NHPFLVGLHSCFQT---ESRLFFVI-EYVNGGDLMFHMQRQR--KLPEEHARFYSAEIS 131
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
A+ +LH++ I +RD+K +N+L G +KLTD+G K E L +PGD
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGH---IKLTDYGMCK-EGL---RPGD-------- 176
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF--- 242
+ C TP Y+APE+L + Y S D W+LGV+M+ ++ G PF
Sbjct: 177 ------------TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
Query: 243 --FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
N Q + I Q P +S +A +++K+ L DP ERL
Sbjct: 225 GSSDNPDQNTEDYLFQVILEKQIRIPRS----MSVKAASVLKSFLNKDPKERL 273
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 55/293 (18%)
Query: 16 DYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQLAV 65
D+D+ ++G G KVL + KKT +YA+KV+ D V+ + V Q +
Sbjct: 6 DFDL-LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS- 63
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+H +V + ++ SR VI E ++GG+L +Q++ E A EI
Sbjct: 64 -NHPFLVGLHSCFQT---ESRLFFVI-EYVNGGDLMFHMQRQR--KLPEEHARFYSAEIS 116
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
A+ +LH++ I +RD+K +N+L G +KLTD+G K E L +PGD
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEGH---IKLTDYGMCK-EGL---RPGD-------- 161
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF--- 242
+ C TP Y+APE+L + Y S D W+LGV+M+ ++ G PF
Sbjct: 162 ------------TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
Query: 243 --FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
N Q + I Q P +S +A +++K+ L DP ERL
Sbjct: 210 GSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAASVLKSFLNKDPKERL 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 55/293 (18%)
Query: 16 DYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH----------DTVKARREVELQLAV 65
D+D+ ++G G KVL + KKT +YA+KV+ D V+ + V Q +
Sbjct: 10 DFDL-LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS- 67
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+H +V + ++ SR VI E ++GG+L +Q++ E A EI
Sbjct: 68 -NHPFLVGLHSCFQT---ESRLFFVI-EYVNGGDLMFHMQRQR--KLPEEHARFYSAEIS 120
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
A+ +LH++ I +RD+K +N+L G +KLTD+G K E L +PGD
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGH---IKLTDYGMCK-EGL---RPGD-------- 165
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF--- 242
+ C TP Y+APE+L + Y S D W+LGV+M+ ++ G PF
Sbjct: 166 ------------TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
Query: 243 --FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
N Q + I Q P +S +A +++K+ L DP ERL
Sbjct: 214 GSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERL 262
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYENIY 82
+G G G V EK T + A+K + + RRE+ ++ + H N+ D+Y +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 83 NGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVK 142
G L V+ME + GG L + E + A + + A+ +LH+Q + HRD+K
Sbjct: 113 VGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 143 PENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTP 202
+++L T G +KL+DFGF ++ +
Sbjct: 169 SDSILLTSDGR---------------------------IKLSDFGFCAQVSKEVPKRKXL 201
Query: 203 CYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ 262
TPY++APEV+ Y DIWSLG+++ ++ G PP+F+ P ++ R+
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE------PPLQAMRRIRD 255
Query: 263 FDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTGKML 321
P + H VS + + ML +PS+R T +++ + F ++ P C ++
Sbjct: 256 SLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHP----FLKLAGPPSCIVPLM 311
Query: 322 KE 323
++
Sbjct: 312 RQ 313
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 46/288 (15%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIVNIKDVYE 79
E +G G G+V + ++ +T +V A+K+ L + +++ ++ V S + Y
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ GS+ L +IME + GG ++ G F E + A ++ EI + +LH + HR
Sbjct: 89 SYLKGSK-LWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L ++ GD +KL DFG A ++ +
Sbjct: 145 DIKAANVLLSEQGD---------------------------VKLADFGVAGQLTDTQIKR 177
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI---SPGMKN 256
T TP+++APEV+ YD DIWSLG+ L G PP H + P
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP 237
Query: 257 RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+G F ++ K I L DPS R T +++++K+I
Sbjct: 238 PTLVGDF----------TKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 49/286 (17%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAV 65
++D++I +++G G G+V + K T +YA+K+L+ +T R E ++ L
Sbjct: 89 REDFEI-IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV-LVN 146
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
G + I + +++ L ++M+ GG+L + + ED E A + E+
Sbjct: 147 GDCQWITALHYAFQD----ENHLYLVMDYYVGGDLLTLLSKFED-KLPEDMARFYIGEMV 201
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
AI +H + HRD+KP+N+L G ++L DFG LK+ D
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGH---IRLADFG---------------SCLKMND 243
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVL-----GPDKYDKSCDIWSLGVIMYILLCGFP 240
G + V+ TP Y++PE+L G KY CD WSLGV MY +L G
Sbjct: 244 DGTVQSSVA--------VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 295
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLC 286
PF++ + N +F FP+ + VS+EAK LI+ ++C
Sbjct: 296 PFYAESLVETYGKIMNHEE--RFQFPSHVTD-VSEEAKDLIQRLIC 338
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 56/302 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARR-------EVELQLAVGS 67
+DY++ +++G G G+V + K T +VYA+K+L +R E +A +
Sbjct: 74 EDYEV-VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+V + +++ R L ++ME M GG+L + + E+ A E+ A
Sbjct: 133 SPWVVQLFYAFQD----DRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLA 185
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +H HRDVKP+N+L K G LKL DFG
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDK---------------------------SGHLKLADFG 218
Query: 188 FAKKIVSNKASL---QTPCYTPYYVAPEVL----GPDKYDKSCDIWSLGVIMYILLCGFP 240
K+ NK + T TP Y++PEVL G Y + CD WS+GV +Y +L G
Sbjct: 219 TCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
PF+++ + N F P+ +S+EAK LI L D RL + V E
Sbjct: 277 PFYADSLVGTYSKIMNHKNSLTF----PDDNDISKEAKNLICAFL-TDREVRLGRNGVEE 331
Query: 301 NK 302
K
Sbjct: 332 IK 333
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 56/302 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARR-------EVELQLAVGS 67
+DY++ +++G G G+V + K T +VYA+K+L +R E +A +
Sbjct: 69 EDYEV-VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 127
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+V + +++ R L ++ME M GG+L + + E+ A E+ A
Sbjct: 128 SPWVVQLFYAFQD----DRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLA 180
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +H HRDVKP+N+L K G LKL DFG
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDK---------------------------SGHLKLADFG 213
Query: 188 FAKKIVSNKASL---QTPCYTPYYVAPEVL----GPDKYDKSCDIWSLGVIMYILLCGFP 240
K+ NK + T TP Y++PEVL G Y + CD WS+GV +Y +L G
Sbjct: 214 TCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
PF+++ + N F P+ +S+EAK LI L D RL + V E
Sbjct: 272 PFYADSLVGTYSKIMNHKNSLTF----PDDNDISKEAKNLICAFL-TDREVRLGRNGVEE 326
Query: 301 NK 302
K
Sbjct: 327 IK 328
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 49/286 (17%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAV 65
++D++I +++G G G+V + K T +YA+K+L+ +T R E ++ L
Sbjct: 73 REDFEI-IKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV-LVN 130
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
G + I + +++ L ++M+ GG+L + + ED E A + E+
Sbjct: 131 GDCQWITALHYAFQD----ENHLYLVMDYYVGGDLLTLLSKFED-KLPEDMARFYIGEMV 185
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
AI +H + HRD+KP+N+L G ++L DFG LK+ D
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGH---IRLADFG---------------SCLKMND 227
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVL-----GPDKYDKSCDIWSLGVIMYILLCGFP 240
G + V+ TP Y++PE+L G KY CD WSLGV MY +L G
Sbjct: 228 DGTVQSSVA--------VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 279
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLC 286
PF++ + N +F FP+ + VS+EAK LI+ ++C
Sbjct: 280 PFYAESLVETYGKIMNHEE--RFQFPSHVTD-VSEEAKDLIQRLIC 322
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 132/302 (43%), Gaps = 56/302 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARR-------EVELQLAVGS 67
+DY++ +++G G G+V + K T +VYA+K+L +R E +A +
Sbjct: 74 EDYEV-VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 132
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+V + +++ R L ++ME M GG+L + + E+ A E+ A
Sbjct: 133 SPWVVQLFYAFQD----DRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLA 185
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +H HRDVKP+N+L K G LKL DFG
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDK---------------------------SGHLKLADFG 218
Query: 188 FAKKIVSNKASL---QTPCYTPYYVAPEVL----GPDKYDKSCDIWSLGVIMYILLCGFP 240
K+ NK + T TP Y++PEVL G Y + CD WS+GV +Y +L G
Sbjct: 219 TCMKM--NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
PF+++ + N F P+ +S+EAK LI L D RL + V E
Sbjct: 277 PFYADSLVGTYSKIMNHKNSLTF----PDDNDISKEAKNLICAFL-TDREVRLGRNGVEE 331
Query: 301 NK 302
K
Sbjct: 332 IK 333
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 49/286 (17%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVKARREVELQLAV 65
++D++I +++G G G+V + K +V+A+K+L+ +T R E ++ L
Sbjct: 73 REDFEI-LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV-LVN 130
Query: 66 GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
G K I + +++ N L ++M+ GG+L + + ED E A + E+
Sbjct: 131 GDSKWITTLHYAFQDDNN----LYLVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMV 185
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
AI +H + HRD+KP+N+L G ++L DFG LKL +
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFG---------------SCLKLME 227
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVL-----GPDKYDKSCDIWSLGVIMYILLCGFP 240
G + V+ TP Y++PE+L G +Y CD WSLGV MY +L G
Sbjct: 228 DGTVQSSVAVG--------TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLC 286
PF++ + N +F FP + VS+ AK LI+ ++C
Sbjct: 280 PFYAESLVETYGKIMNHKE--RFQFPT-QVTDVSENAKDLIRRLIC 322
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 51/280 (18%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLA-------VGSHKHIVNI 74
+LG G GKV+ K T E+YA+K+L D V +VE + G + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
++ + L +ME ++GG+L IQQ G F E A EI + FL +
Sbjct: 87 HSCFQTMDR----LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I +RD+K +N++ G +K+ DFG K+ +
Sbjct: 141 GIIYRDLKLDNVMLDSEGH---------------------------IKIADFGMCKENIW 173
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAISPG 253
+ + + C TP Y+APE++ Y KS D W+ GV++Y +L G PF + +
Sbjct: 174 DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
M++ + +P + +S+EA + K ++ P +RL
Sbjct: 234 MEHNVA-----YP----KSMSKEAVAICKGLMTKHPGKRL 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 51/280 (18%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREVELQLA-------VGSHKHIVNI 74
+LG G GKV+ K T E+YA+K+L D V +VE + G + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
++ + L +ME ++GG+L IQQ G F E A EI + FL +
Sbjct: 408 HSCFQTMDR----LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I +RD+K +N++ G +K+ DFG K+ +
Sbjct: 462 GIIYRDLKLDNVMLDSEGH---------------------------IKIADFGMCKENIW 494
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAISPG 253
+ + + C TP Y+APE++ Y KS D W+ GV++Y +L G PF + +
Sbjct: 495 DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
M++ + +P + +S+EA + K ++ P +RL
Sbjct: 555 MEHNVA-----YP----KSMSKEAVAICKGLMTKHPGKRL 585
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 95
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 96 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 146
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 147 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 179
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A + T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 180 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 240 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 92
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 93 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 143
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 144 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 176
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 177 AKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 237 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 94
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I++ G+F E EI SA+
Sbjct: 95 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSAL 145
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 146 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 178
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 239 EGLI---FAKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 91
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 92 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 142
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 143 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 175
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A + T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 176 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 236 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 94
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 95 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 145
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 146 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 178
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 239 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 94
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 95 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 145
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 146 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 178
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 239 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 92
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 93 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 143
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 144 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 176
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 237 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 94
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 95 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 145
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 146 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 178
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 239 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 95
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 96 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 146
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 147 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 179
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 180 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 240 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 283
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 92
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 93 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 143
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 144 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 176
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 237 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 5 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 121 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 153
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 213
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 214 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 265
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 69
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I++ G+F E EI SA+
Sbjct: 70 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSAL 120
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 121 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 153
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 154 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 214 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 257
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 40/285 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIVNIKDVYE 79
E +G G G+V + ++ +T +V A+K+ L + +++ ++ V S + Y
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ ++ L +IME + GG + E G E + A I+ EI + +LH + HR
Sbjct: 73 SYLKDTK-LWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L L++ G+VK L DFG A ++ +
Sbjct: 129 DIKAANVL-----------LSEHGEVK----------------LADFGVAGQLTDTQIKR 161
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
T TP+++APEV+ YD DIWSLG+ L G PP H MK
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFL 215
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ + + P E + S+ K ++ L +PS R T +++++K+I
Sbjct: 216 IPKNNPPTLEGNY-SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 70
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 71 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 121
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 122 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 154
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 155 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 215 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 99
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I++ G+F E EI SA+
Sbjct: 100 VKLYFCFQDDEKLYFG-------LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSAL 150
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 151 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 183
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 184 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 244 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 287
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 72
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 73 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 123
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 124 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 156
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 157 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 217 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 260
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 94
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I++ G+F E EI SA+
Sbjct: 95 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSAL 145
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 146 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 178
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 239 EGLI---FAKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 71
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 72 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 122
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 123 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 155
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 156 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 216 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 259
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 91
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 92 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 142
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 143 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 175
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 176 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 236 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 279
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L C T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 40/285 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIVNIKDVYE 79
E +G G G+V + ++ +T +V A+K+ L + +++ ++ V S + Y
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ ++ L +IME + GG + E G E + A I+ EI + +LH + HR
Sbjct: 93 SYLKDTK-LWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L L++ G+VK L DFG A ++ +
Sbjct: 149 DIKAANVL-----------LSEHGEVK----------------LADFGVAGQLTDTQIKR 181
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
T TP+++APEV+ YD DIWSLG+ L G PP H MK
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFL 235
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ + + P E + S+ K ++ L +PS R T +++++K+I
Sbjct: 236 IPKNNPPTLEGNY-SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 76
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 77 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 127
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 128 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 160
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 161 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 221 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 94
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + G L + I ++ G+F E EI SA+
Sbjct: 95 VKLYFTFQDDEKLYFG-------LSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSAL 145
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 146 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 178
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A + T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 239 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 282
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G + E TS YA+K+L V R+V +L H
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 92
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 93 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 143
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 144 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 176
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP E +A+ L++ +L +D ++RL +++
Sbjct: 237 EYLI---FQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEM 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 62/292 (21%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVELQLAVGSHKHI 71
+ILG G V+ E TS YA+K+L V R+V +L H
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---DHPFF 97
Query: 72 VNIKDVY---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
V + + E +Y G + GEL + I ++ G+F E EI SA+
Sbjct: 98 VKLYFTFQDDEKLYFG-------LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSAL 148
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++LH + I HRD+KPEN+L + D+ +++TDFG
Sbjct: 149 EYLHGKGIIHRDLKPENILLNE-------------DMH--------------IQITDFGT 181
Query: 189 AKKIV--SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK + S +A T YV+PE+L KS D+W+LG I+Y L+ G PPF + +
Sbjct: 182 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
I + I+L ++DFP + +A+ L++ +L +D ++RL +++
Sbjct: 242 EYLI---FQKIIKL-EYDFPAAFF----PKARDLVEKLLVLDATKRLGCEEM 285
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 40/288 (13%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIVNIKDVYENI 81
+G G G+V + ++ T EV A+K+ L + +++ ++ V S I Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITR-YFGS 85
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
Y S L +IME + GG ++ G E A I+ EI + +LH + HRD+
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K N+L ++ GD +KL DFG A ++ +
Sbjct: 143 KAANVLLSEQGD---------------------------VKLADFGVAGQLTDTQIKRNX 175
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TP+++APEV+ YD DIWSLG+ L G PP H M+ +
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH------PMRVLFLIP 229
Query: 262 QFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
+ P E +H S+ K ++ L DP R T +++++K+I+++ +
Sbjct: 230 KNSPPTLEGQH-SKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTK 276
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 52/300 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARR-------EVELQLAVGS 67
+DYD+ +++G G G+V + K + +VYA+K+L +R E +A +
Sbjct: 75 EDYDV-VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+V + +++ + L ++ME M GG+L + + E+ A E+ A
Sbjct: 134 SPWVVQLFCAFQD----DKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLA 186
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +H + HRDVKP+N+L K G LKL DFG
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKH---------------------------GHLKLADFG 219
Query: 188 FAKKI-VSNKASLQTPCYTPYYVAPEVL----GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
K+ + T TP Y++PEVL G Y + CD WS+GV ++ +L G PF
Sbjct: 220 TCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
+++ G ++I + PE +S+ AK LI L D RL + V E K
Sbjct: 280 YADS----LVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFL-TDREVRLGRNGVEEIK 334
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIVNIKDVYE 79
E +G G G+V + ++ +T +V A+K+ L + +++ ++ V S + Y
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ ++ L +IME + GG + E G E + A I+ EI + +LH + HR
Sbjct: 88 SYLKDTK-LWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L L++ G+VK L DFG A ++ +
Sbjct: 144 DIKAANVL-----------LSEHGEVK----------------LADFGVAGQLTDTQIKR 176
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
TP+++APEV+ YD DIWSLG+ L G PP H MK
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFL 230
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ + + P E + S+ K ++ L +PS R T +++++K+I
Sbjct: 231 IPKNNPPTLEGNY-SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 40/285 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIVNIKDVYE 79
E +G G G+V + ++ +T +V A+K+ L + +++ ++ V S + Y
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
+ ++ L +IME + GG + E G E + A I+ EI + +LH + HR
Sbjct: 73 SYLKDTK-LWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L L++ G+VK L DFG A ++ +
Sbjct: 129 DIKAANVL-----------LSEHGEVK----------------LADFGVAGQLTDTQIKR 161
Query: 200 QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIR 259
TP+++APEV+ YD DIWSLG+ L G PP H MK
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFL 215
Query: 260 LGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ + + P E + S+ K ++ L +PS R T +++++K+I
Sbjct: 216 IPKNNPPTLEGNY-SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E +G G +G V ++ T + A++ ++ + ++E+ + ++ V NI + ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
G L V+ME + GG L + + E + A + E A++FLH + HRD
Sbjct: 86 YLVGDE-LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+K +N+L G G +KLTDFGF +I ++
Sbjct: 142 IKSDNILL---------------------------GMDGSVKLTDFGFCAQITPEQSKRS 174
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
T TPY++APEV+ Y DIWSLG++ ++ G PP+ + +
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 45/279 (16%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLHDT--------VKARREVELQLAVGSHKHIVNI 74
+LG G G+V + T ++YA K L A E ++ V S + +V++
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVSL 249
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
YE L +++ M+GG+L I F E A EIC ++ LH +
Sbjct: 250 AYAYET----KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I +RD+KPEN+L D G ++++D G A +
Sbjct: 306 RIVYRDLKPENILLD---------------------------DHGHIRISDLGLAVHVPE 338
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ +++ T Y+APEV+ ++Y S D W+LG ++Y ++ G PF + +
Sbjct: 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ ++ + P E S +A++L +LC DP+ERL
Sbjct: 398 ERLVK----EVPEEYSERFSPQARSLCSQLLCKDPAERL 432
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 45/279 (16%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLHDT--------VKARREVELQLAVGSHKHIVNI 74
+LG G G+V + T ++YA K L A E ++ V S + +V++
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVSL 249
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
YE + CL++ + M+GG+L I F E A EIC ++ LH +
Sbjct: 250 AYAYET--KDALCLVLTL--MNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I +RD+KPEN+L D G ++++D G A +
Sbjct: 306 RIVYRDLKPENILLD---------------------------DHGHIRISDLGLAVHVPE 338
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ +++ T Y+APEV+ ++Y S D W+LG ++Y ++ G PF + +
Sbjct: 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 255 KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ ++ + P E S +A++L +LC DP+ERL
Sbjct: 398 ERLVK----EVPEEYSERFSPQARSLCSQLLCKDPAERL 432
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSX 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 7 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 123 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 155
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 156 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 216 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHIV 72
+D+D+ + LG G G+V V + T E A+K+ + V ++ ++ + +
Sbjct: 6 EDWDL-VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
N+ Y + G+ L + C GGELF RI+ D E +A +++ + + +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYC-SGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KPENLL + + LK++DFG A
Sbjct: 122 GIGITHRDIKPENLLLDERDN---------------------------LKISDFGLATVF 154
Query: 193 VSNKAS--LQTPCYTPYYVAPEVLGPDKYD-KSCDIWSLGVIMYILLCGFPPFF--SNHG 247
N L T YVAPE+L ++ + D+WS G+++ +L G P+ S+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 214
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
Q S + + L NP W+ + L+ +L +PS R+TI + +++W ++
Sbjct: 215 QEYSDWKEKKTYL------NP-WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E +G G +G V ++ T + A++ ++ + ++E+ + ++ V NI + ++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
G L V+ME + GG L + + E + A + E A++FLH + HR+
Sbjct: 87 YLVGDE-LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRN 142
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+K +N+L G G +KLTDFGF +I ++
Sbjct: 143 IKSDNILL---------------------------GMDGSVKLTDFGFCAQITPEQSKRS 175
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
T TPY++APEV+ Y DIWSLG++ ++ G PP+ + +
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 47/277 (16%)
Query: 43 VYALKVLHDTVK----------ARREVELQLAVGSHKHIVNIKDV-YENIYNGSRCLLVI 91
VYA + L + V+ +R L + HKH+ + V Y ++ + + +
Sbjct: 38 VYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAI--IMNEICSAIKFLHDQNIAHRDVKPENLLYT 149
ME + GG L ++ K G + E I +I +K+LHD I HRD+K +N+L
Sbjct: 98 MEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN 156
Query: 150 KPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYV 209
Y+ G+LK++DFG +K++ +T T Y+
Sbjct: 157 ---------------------TYS-----GVLKISDFGTSKRLAGINPCTETFTGTLQYM 190
Query: 210 APEVL--GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
APE++ GP Y K+ DIWSLG + + G PPF+ + ++G F
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE-----LGEPQAAMFKVGMFKVHP 245
Query: 268 PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E +S EAK I DP +R + ++ ++++
Sbjct: 246 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E +G G +G V ++ T + A++ ++ + ++E+ + ++ V NI + ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
G L V+ME + GG L + + E + A + E A++FLH + HRD
Sbjct: 86 YLVGDE-LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+K +N+L G G +KLTDFGF +I ++
Sbjct: 142 IKSDNILL---------------------------GMDGSVKLTDFGFCAQITPEQSKRS 174
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
TPY++APEV+ Y DIWSLG++ ++ G PP+ + +
Sbjct: 175 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E +G G +G V ++ T + A++ ++ + ++E+ + ++ V NI + ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
G L V+ME + GG L + + E + A + E A++FLH + HRD
Sbjct: 86 YLVGDE-LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+K +N+L G G +KLTDFGF +I ++
Sbjct: 142 IKSDNILL---------------------------GMDGSVKLTDFGFCAQITPEQSKRS 174
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
TPY++APEV+ Y DIWSLG++ ++ G PP+ + +
Sbjct: 175 EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E +G G +G V ++ T + A++ ++ + ++E+ + ++ V NI + ++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
G L V+ME + GG L + + E + A + E A++FLH + HRD
Sbjct: 87 YLVGDE-LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRD 142
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+K +N+L G G +KLTDFGF +I ++
Sbjct: 143 IKSDNILL---------------------------GMDGSVKLTDFGFCAQITPEQSKRS 175
Query: 201 TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
TPY++APEV+ Y DIWSLG++ ++ G PP+ + +
Sbjct: 176 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V + + ++ A+K + + RRE+ V ++H N+ ++Y +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSY 97
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + E + A + + A+ LH Q + HRD+
Sbjct: 98 LVGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 153
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF ++ +
Sbjct: 154 KSDSILLTHDGR---------------------------VKLSDFGFCAQVSKEVPRRKX 186
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TPY++APE++ Y DIWSLG+++ ++ G PP+F+ P +K +++
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKA-MKMI 239
Query: 262 QFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + P P ++ VS K + +L DP++R T +++++ ++++
Sbjct: 240 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V + + ++ A+K + + RRE+ V ++H N+ ++Y +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSY 90
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + E + A + + A+ LH Q + HRD+
Sbjct: 91 LVGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 146
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF ++ +
Sbjct: 147 KSDSILLTHDGR---------------------------VKLSDFGFCAQVSKEVPRRKX 179
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TPY++APE++ Y DIWSLG+++ ++ G PP+F+ P +K +++
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKA-MKMI 232
Query: 262 QFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + P P ++ VS K + +L DP++R T +++++ ++++
Sbjct: 233 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V + + ++ A+K + + RRE+ V ++H N+ ++Y +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSY 217
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + E + A + + A+ LH Q + HRD+
Sbjct: 218 LVGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 273
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF ++ +
Sbjct: 274 KSDSILLTH---------------------------DGRVKLSDFGFCAQVSKEVPRRKX 306
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TPY++APE++ Y DIWSLG+++ ++ G PP+F+ P +K +++
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKA-MKMI 359
Query: 262 QFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + P P ++ VS K + +L DP++R T +++++ ++++
Sbjct: 360 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V + + ++ A+K + + RRE+ V ++H N+ ++Y +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSY 140
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + E + A + + A+ LH Q + HRD+
Sbjct: 141 LVGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 196
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF ++ +
Sbjct: 197 KSDSILLTHDGR---------------------------VKLSDFGFCAQVSKEVPRRKX 229
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TPY++APE++ Y DIWSLG+++ ++ G PP+F+ P +K +++
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKA-MKMI 282
Query: 262 QFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + P P ++ VS K + +L DP++R T +++++ ++++
Sbjct: 283 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V + + ++ A+K + + RRE+ V ++H N+ ++Y +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSY 95
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + E + A + + A+ LH Q + HRD+
Sbjct: 96 LVGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 151
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF ++ +
Sbjct: 152 KSDSILLTHDGR---------------------------VKLSDFGFCAQVSKEVPRRKX 184
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TPY++APE++ Y DIWSLG+++ ++ G PP+F+ P +K +++
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKA-MKMI 237
Query: 262 QFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + P P ++ VS K + +L DP++R T +++++ ++++
Sbjct: 238 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAV--GSHKHIVNIKDVYENI 81
+G G G V + + ++ A+K + + RRE+ V ++H N+ ++Y +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSY 86
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
G L V+ME + GG L + E + A + + A+ LH Q + HRD+
Sbjct: 87 LVGDE-LWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDI 142
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQT 201
K +++L T G +KL+DFGF ++ +
Sbjct: 143 KSDSILLTHDGR---------------------------VKLSDFGFCAQVSKEVPRRKX 175
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLG 261
TPY++APE++ Y DIWSLG+++ ++ G PP+F+ P +K +++
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE------PPLKA-MKMI 228
Query: 262 QFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + P P ++ VS K + +L DP++R T +++++ ++++
Sbjct: 229 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 35/233 (15%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQLAVG-SHKHIVNIKD 76
E LG G G VL+ + + T E A+K + + R +E+Q+ +H ++V+ ++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 77 VYENIYN--GSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAIIMNEICSAIKFLHD 133
V + + + L+ ME GG+L + + Q E+ E ++++I SA+++LH+
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HRD+KPEN++ +PG P+ L++ K+ D G+AK++
Sbjct: 140 NRIIHRDLKPENIVL-QPG--------------PQRLIH---------KIIDLGYAKEL- 174
Query: 194 SNKASLQTPCY-TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
++ L T T Y+APE+L KY + D WS G + + + GF PF N
Sbjct: 175 -DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 35/233 (15%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQLAVG-SHKHIVNIKD 76
E LG G G VL+ + + T E A+K + + R +E+Q+ +H ++V+ ++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 77 VYENIYN--GSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAIIMNEICSAIKFLHD 133
V + + + L+ ME GG+L + + Q E+ E ++++I SA+++LH+
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HRD+KPEN++ +PG P+ L++ K+ D G+AK++
Sbjct: 141 NRIIHRDLKPENIVL-QPG--------------PQRLIH---------KIIDLGYAKEL- 175
Query: 194 SNKASLQTPCY-TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
++ L T T Y+APE+L KY + D WS G + + + GF PF N
Sbjct: 176 -DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 47/277 (16%)
Query: 43 VYALKVLHDTVK----------ARREVELQLAVGSHKHIVNIKDV-YENIYNGSRCLLVI 91
VYA + L + V+ +R L + HKH+ + V Y ++ + + +
Sbjct: 24 VYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 83
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAI--IMNEICSAIKFLHDQNIAHRDVKPENLLYT 149
ME + GG L ++ K G + E I +I +K+LHD I HRD+K +N+L
Sbjct: 84 MEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN 142
Query: 150 KPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYV 209
Y+ G+LK++DFG +K++ +T T Y+
Sbjct: 143 T---------------------YS-----GVLKISDFGTSKRLAGINPCTETFTGTLQYM 176
Query: 210 APEVL--GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
APE++ GP Y K+ DIWSLG + + G PPF+ + ++G F
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE-----LGEPQAAMFKVGMFKVHP 231
Query: 268 PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E +S EAK I DP +R + ++ ++++
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE------VELQLAVGSH 68
+D+ + +LG G G+V K T ++YA K L+ +R+ VE ++ H
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 69 -KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEIC 125
+ IV++ +E + L ++M M+GG++ I +++ F E A +I
Sbjct: 244 SRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
S ++ LH +NI +RD+KPEN+L D G ++++D
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLD---------------------------DDGNVRISD 332
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
G A ++ + + + TP ++APE+L ++YD S D ++LGV +Y ++ PF +
Sbjct: 333 LGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ + +K R+ +P+ S +K + +L DP +RL
Sbjct: 393 GEKVENKELKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE------VELQLAVGSH 68
+D+ + +LG G G+V K T ++YA K L+ +R+ VE ++ H
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 69 -KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEIC 125
+ IV++ +E + L ++M M+GG++ I +++ F E A +I
Sbjct: 244 SRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
S ++ LH +NI +RD+KPEN+L D G ++++D
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLD---------------------------DDGNVRISD 332
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
G A ++ + + + TP ++APE+L ++YD S D ++LGV +Y ++ PF +
Sbjct: 333 LGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ + +K R+ +P+ S +K + +L DP +RL
Sbjct: 393 GEKVENKELKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRL 436
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE------VELQLAVGSH 68
+D+ + +LG G G+V K T ++YA K L+ +R+ VE ++ H
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 69 -KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEIC 125
+ IV++ +E + L ++M M+GG++ I +++ F E A +I
Sbjct: 244 SRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
S ++ LH +NI +RD+KPEN+L D G ++++D
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLD---------------------------DDGNVRISD 332
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
G A ++ + + + TP ++APE+L ++YD S D ++LGV +Y ++ PF +
Sbjct: 333 LGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ + +K R+ +P+ S +K + +L DP +RL
Sbjct: 393 GEKVENKELKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE------VELQLAVGSH 68
+D+ + +LG G G+V K T ++YA K L+ +R+ VE ++ H
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 69 -KHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEIC 125
+ IV++ +E + L ++M M+GG++ I +++ F E A +I
Sbjct: 244 SRFIVSLAYAFETKTD----LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
S ++ LH +NI +RD+KPEN+L D G ++++D
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLD---------------------------DDGNVRISD 332
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
G A ++ + + + TP ++APE+L ++YD S D ++LGV +Y ++ PF +
Sbjct: 333 LGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
+ + +K R+ +P+ S +K + +L DP +RL
Sbjct: 393 GEKVENKELKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRL 436
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 51/327 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLA 64
+ D Y++ EILG G +V + + A+KVL + + RRE + A
Sbjct: 10 LSDRYELG-EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
+ +H IV + D E ++ME + G L + +G T + A ++ +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADA 125
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
C A+ F H I HRDVKP N+L + +K+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANILISA---------------------------TNAVKVV 158
Query: 185 DFGFAKKIVSNKASL-QTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
DFG A+ I + S+ QT T Y++PE D D D++SLG ++Y +L G PP
Sbjct: 159 DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F + +++ +R P+ E +S + ++ L +P R M
Sbjct: 219 FTGDSPVSVA---YQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 302 KWISQFN-QVPQTPLCTGKMLKEGEET 327
+ N + P+ P K+L + E T
Sbjct: 275 DLVRVHNGEPPEAP----KVLTDAERT 297
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQL-AVGSHKHIVNIKDVY-- 78
E++G G G+V + KT ++ A+KV+ T E++ ++ + + H NI Y
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 79 ---ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
+N L ++ME G + I+ + E A I EI + LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 149
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
+ HRD+K +N+L T+ + +KL DFG + ++
Sbjct: 150 VIHRDIKGQNVLLTENAE---------------------------VKLVDFGVSAQLDRT 182
Query: 196 KASLQTPCYTPYYVAPEVLGPDK-----YDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
T TPY++APEV+ D+ YD D+WSLG+ + G PP H
Sbjct: 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH---- 238
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
M+ + + P + + S++ ++ I++ L + S+R +Q+M++ +I
Sbjct: 239 --PMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 134/327 (40%), Gaps = 51/327 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLA 64
+ D Y++ EILG G +V + + A+KVL + + RRE + A
Sbjct: 10 LSDRYELG-EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
+ +H IV + D E ++ME + G L + +G T + A ++ +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADA 125
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
C A+ F H I HRDVKP N++ + +K+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISA---------------------------TNAVKVM 158
Query: 185 DFGFAKKIVSNKASL-QTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
DFG A+ I + S+ QT T Y++PE D D D++SLG ++Y +L G PP
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F + +++ +R P+ E +S + ++ L +P R M
Sbjct: 219 FTGDSPDSVA---YQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 302 KWISQFN-QVPQTPLCTGKMLKEGEET 327
+ N + P+ P K+L + E T
Sbjct: 275 DLVRVHNGEPPEAP----KVLTDAERT 297
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 54/299 (18%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE---VELQ-LAVGSHKHIVNIKDVYE 79
LG G GKV + K+T + A KV+ + E VE++ LA H +IV + Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY- 77
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
Y+ + ++I C G I + D TE + ++ ++ A+ FLH + I HR
Sbjct: 78 --YHDGKLWIMIEFCPGGA--VDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L T GD ++L DFG + K +
Sbjct: 134 DLKAGNVLMTLEGD---------------------------IRLADFGVSAKNLKTLQKR 166
Query: 200 QTPCYTPYYVAPEV-----LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ TPY++APEV + YD DIWSLG+ + + PP ++P M
Sbjct: 167 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH-----HELNP-M 220
Query: 255 KNRIRLGQFDFPN----PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
+ +++ + D P +W S E + +K L +P R + Q++E+ ++S
Sbjct: 221 RVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 276
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 54/299 (18%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE---VELQ-LAVGSHKHIVNIKDVYE 79
LG G GKV + K+T + A KV+ + E VE++ LA H +IV + Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY- 85
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHR 139
Y+ + ++I C G I + D TE + ++ ++ A+ FLH + I HR
Sbjct: 86 --YHDGKLWIMIEFCPGGA--VDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 140 DVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASL 199
D+K N+L T GD ++L DFG + K +
Sbjct: 142 DLKAGNVLMTLEGD---------------------------IRLADFGVSAKNLKTLQKR 174
Query: 200 QTPCYTPYYVAPEV-----LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGM 254
+ TPY++APEV + YD DIWSLG+ + + PP ++P M
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH-----HELNP-M 228
Query: 255 KNRIRLGQFDFPN----PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQ 309
+ +++ + D P +W S E + +K L +P R + Q++E+ ++S
Sbjct: 229 RVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITS 284
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 88 LLVIMECMHGGELFQRIQ--QKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPEN 145
L +++E G+L + I+ +K+ ER ++CSA++ +H + + HRD+KP N
Sbjct: 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN 166
Query: 146 LLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYT 205
+ T G++KL D G + S + + T
Sbjct: 167 VFITA---------------------------TGVVKLGDLGLGRFFSSKTTAAHSLVGT 199
Query: 206 PYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDF 265
PYY++PE + + Y+ DIWSLG ++Y + PF+ + S K + Q D+
Sbjct: 200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK----IEQCDY 255
Query: 266 PNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
P +H S+E + L+ + DP +R + V +
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 134/327 (40%), Gaps = 51/327 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLA 64
+ D Y++ EILG G +V + + A+KVL + + RRE + A
Sbjct: 10 LSDRYELG-EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
+ +H IV + D E ++ME + G L + +G T + A ++ +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADA 125
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
C A+ F H I HRDVKP N++ + +K+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISA---------------------------TNAVKVM 158
Query: 185 DFGFAKKIVSNKASL-QTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
DFG A+ I + S+ QT T Y++PE D D D++SLG ++Y +L G PP
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F + +++ +R P+ E +S + ++ L +P R M
Sbjct: 219 FTGDSPVSVA---YQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 302 KWISQFN-QVPQTPLCTGKMLKEGEET 327
+ N + P+ P K+L + E T
Sbjct: 275 DLVRVHNGEPPEAP----KVLTDAERT 297
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 134/327 (40%), Gaps = 51/327 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLA 64
+ D Y++ EILG G +V + + A+KVL + + RRE + A
Sbjct: 10 LSDRYELG-EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
+ +H IV + D E ++ME + G L + +G T + A ++ +
Sbjct: 69 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADA 125
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
C A+ F H I HRDVKP N++ + +K+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISA---------------------------TNAVKVM 158
Query: 185 DFGFAKKIVSNKASL-QTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
DFG A+ I + S+ QT T Y++PE D D D++SLG ++Y +L G PP
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F + +++ +R P+ E +S + ++ L +P R M
Sbjct: 219 FTGDSPVSVA---YQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 302 KWISQFN-QVPQTPLCTGKMLKEGEET 327
+ N + P+ P K+L + E T
Sbjct: 275 DLVRVHNGEPPEAP----KVLTDAERT 297
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 111/286 (38%), Gaps = 75/286 (26%)
Query: 55 ARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTE 114
A RE+ L L H +IV++ DV + RCL ++ E M +++ + +
Sbjct: 66 AIREISL-LKELHHPNIVSLIDVI----HSERCLTLVFEFMEKD--LKKVLDENKTGLQD 118
Query: 115 REAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
+ I + ++ + H I HRD+KP+NLL
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS------------------------ 154
Query: 175 PGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMY 233
G LKL DFG A+ S T +Y AP+VL G KY S DIWS+G I
Sbjct: 155 ---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 234 ILLCGFPPFFSNHGQAISPGMKNRIRLGQ----FDFPNP-EWEHVS-------------- 274
++ G P F PG+ + +L + PNP EW V
Sbjct: 212 EMITGKPLF---------PGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE 262
Query: 275 ------------QEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
QE L+ NMLC DP++R++ M + + +
Sbjct: 263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 65/318 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVK-------ARREVELQLAVGSHKHIVNIKD 76
+G G G V + + T ++ A+K ++ A RE+ + L H ++VN+ +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRM-LKQLKHPNLVNLLE 69
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V+ R LV C H + + + + G E I + A+ F H N
Sbjct: 70 VFRR---KRRLHLVFEYCDHT--VLHELDRYQRGV-PEHLVKSITWQTLQAVNFCHKHNC 123
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRDVKPEN+L TK ++KL DFGFA+ +
Sbjct: 124 IHRDVKPENILITK---------------------------HSVIKLCDFGFARLLTGPS 156
Query: 197 ASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFP--PFFSNHGQA---- 249
T +Y +PE+L G +Y D+W++G + LL G P P S+ Q
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
Query: 250 -----ISPGMKNRIRLGQF----DFPNPE--------WEHVSQEAKTLIKNMLCVDPSER 292
+ P + Q+ P+PE + ++S A L+K L +DP+ER
Sbjct: 217 KTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276
Query: 293 LTIDQVMENKWISQFNQV 310
LT +Q++ + + ++
Sbjct: 277 LTCEQLLHHPYFENIREI 294
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 111/286 (38%), Gaps = 75/286 (26%)
Query: 55 ARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTE 114
A RE+ L L H +IV++ DV + RCL ++ E M +++ + +
Sbjct: 66 AIREISL-LKELHHPNIVSLIDVI----HSERCLTLVFEFMEKD--LKKVLDENKTGLQD 118
Query: 115 REAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
+ I + ++ + H I HRD+KP+NLL
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN------------------------- 153
Query: 175 PGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMY 233
G LKL DFG A+ S T +Y AP+VL G KY S DIWS+G I
Sbjct: 154 --SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 234 ILLCGFPPFFSNHGQAISPGMKNRIRLGQ----FDFPNP-EWEHVS-------------- 274
++ G P F PG+ + +L + PNP EW V
Sbjct: 212 EMITGKPLF---------PGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE 262
Query: 275 ------------QEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
QE L+ NMLC DP++R++ M + + +
Sbjct: 263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 36/198 (18%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+E +A ++ I++LH Q I HRD+KP NLL
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----------------------- 170
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK---YDKSCDIWSL 228
G+ G +K+ DFG + + + A L TP ++APE L + K+ D+W++
Sbjct: 171 ----GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226
Query: 229 GVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVD 288
GV +Y + G PF + ++I+ +FP+ ++++ K LI ML +
Sbjct: 227 GVTLYCFVFGQCPFMDERIMC----LHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKN 280
Query: 289 PSERLTIDQVMENKWISQ 306
P R+ + ++ + W+++
Sbjct: 281 PESRIVVPEIKLHPWVTR 298
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 133/305 (43%), Gaps = 54/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS------- 67
+DY++ I G G G+ +I K ++ K L + E E Q+ V
Sbjct: 6 EDYEVLYTI-GTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVSEVNLLREL 62
Query: 68 -HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEI 124
H +IV D + N + L ++ME GG+L I + KE E +M ++
Sbjct: 63 KHPNIVRYYDRIIDRTNTT--LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 125 CSAIKFLHDQN-----IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
A+K H ++ + HRD+KP N+ F D K
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANV---------------FLDGKQN----------- 154
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
+KL DFG A+ + + + +T TPYY++PE + Y++ DIWSLG ++Y L
Sbjct: 155 -VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 240 PPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
PPF + + ++ +IR G+F + S E +I ML + R ++++++
Sbjct: 214 PPFTAFSQKELA----GKIREGKFRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 300 ENKWI 304
EN I
Sbjct: 267 ENPLI 271
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 68/303 (22%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVG 66
+DD++I +++G G +V + K+T +VYA+K+++ V RE L G
Sbjct: 60 RDDFEI-LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG 118
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER----EAAIIMN 122
+ I + +++ L ++ME GG+L + + F ER A +
Sbjct: 119 DRRWITQLHFAFQD----ENYLYLVMEYYVGGDLLTLLSK-----FGERIPAEMARFYLA 169
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
EI AI +H HRD+KP+N+L + G ++L DFG LK
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILLDRCGH---IRLADFGSC---------------LK 211
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGP-------DKYDKSCDIWSLGVIMYIL 235
L G + +V+ TP Y++PE+L Y CD W+LGV Y +
Sbjct: 212 LRADGTVRSLVAVG--------TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM 263
Query: 236 LCGFPPFFSN-----HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPS 290
G PF+++ +G+ + K + L D E V +EA+ I+ +LC P
Sbjct: 264 FYGQTPFYADSTAETYGKIVH--YKEHLSLPLVD------EGVPEEARDFIQRLLC-PPE 314
Query: 291 ERL 293
RL
Sbjct: 315 TRL 317
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 133/327 (40%), Gaps = 51/327 (15%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLA 64
+ D Y++ EILG G +V + + A+KVL + + RRE + A
Sbjct: 10 LSDRYELG-EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
+ +H IV + E ++ME + G L + +G T + A ++ +
Sbjct: 69 L-NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADA 125
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
C A+ F H I HRDVKP N++ + +K+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISA---------------------------TNAVKVM 158
Query: 185 DFGFAKKIVSNKASL-QTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
DFG A+ I + S+ QT T Y++PE D D D++SLG ++Y +L G PP
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F + +++ +R P+ E +S + ++ L +P R M
Sbjct: 219 FTGDSPVSVA---YQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 302 KWISQFN-QVPQTPLCTGKMLKEGEET 327
+ N + P+ P K+L + E T
Sbjct: 275 DLVRVHNGEPPEAP----KVLTDAERT 297
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS------- 67
+DY++ I G G G+ +I K ++ K L + E E Q+ V
Sbjct: 6 EDYEVLYTI-GTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVSEVNLLREL 62
Query: 68 -HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEI 124
H +IV D + N + L ++ME GG+L I + KE E +M ++
Sbjct: 63 KHPNIVRYYDRIIDRTNTT--LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 125 CSAIKFLHDQN-----IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
A+K H ++ + HRD+KP N+ + +KL DFG + N
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILN---------- 167
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
D FAK V TPYY++PE + Y++ DIWSLG ++Y L
Sbjct: 168 ----HDTSFAKAFVG----------TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 240 PPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
PPF + + ++ +IR G+F + S E +I ML + R ++++++
Sbjct: 214 PPFTAFSQKELA----GKIREGKFRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEIL 266
Query: 300 ENKWI 304
EN I
Sbjct: 267 ENPLI 271
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 54/259 (20%)
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
NI +Y+ I+ R +LV H + +++ +G A + ++ + I + H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFE---HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D+ + HRD+KP+NLL + G+ LK+ DFG A+
Sbjct: 118 DRRVLHRDLKPQNLLINREGE---------------------------LKIADFGLARAF 150
Query: 193 VSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPF--------- 242
T +Y AP+VL G KY + DIWS+G I ++ G P F
Sbjct: 151 GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQL 210
Query: 243 ---FSNHGQAISPGMKNRIRLGQFDFPNPE------WEH----VSQEAKTLIKNMLCVDP 289
F G S N L ++D PN WE + + L+ ML +DP
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKYD-PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP 269
Query: 290 SERLTIDQVMENKWISQFN 308
++R+T Q +E+ + + N
Sbjct: 270 NQRITAKQALEHAYFKENN 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 54/259 (20%)
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
NI +Y+ I+ R +LV H + +++ +G A + ++ + I + H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFE---HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D+ + HRD+KP+NLL + G+ LK+ DFG A+
Sbjct: 118 DRRVLHRDLKPQNLLINREGE---------------------------LKIADFGLARAF 150
Query: 193 VSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPF--------- 242
T +Y AP+VL G KY + DIWS+G I ++ G P F
Sbjct: 151 GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210
Query: 243 ---FSNHGQAISPGMKNRIRLGQFDFPNPE------WEH----VSQEAKTLIKNMLCVDP 289
F G S N L ++D PN WE + + L+ ML +DP
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKYD-PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP 269
Query: 290 SERLTIDQVMENKWISQFN 308
++R+T Q +E+ + + N
Sbjct: 270 NQRITAKQALEHAYFKENN 288
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 46/307 (14%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV--------KARREVELQLA 64
+ D Y++ EILG G +V + + A+KVL + + RRE + A
Sbjct: 27 LSDRYELG-EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
+ +H IV + D E ++ME + G L + +G T + A ++ +
Sbjct: 86 L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADA 142
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
C A+ F H I HRDVKP N++ + +K+
Sbjct: 143 CQALNFSHQNGIIHRDVKPANIMISAT---------------------------NAVKVM 175
Query: 185 DFGFAKKIVSNKASL-QTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
DFG A+ I + S+ QT T Y++PE D D D++SLG ++Y +L G PP
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
F + +++ +R P+ E +S + ++ L +P R M
Sbjct: 236 FTGDSPVSVA---YQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 291
Query: 302 KWISQFN 308
+ N
Sbjct: 292 DLVRVHN 298
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 54/259 (20%)
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
NI +Y+ I+ R +LV H + +++ +G A + ++ + I + H
Sbjct: 61 NIVKLYDVIHTKKRLVLVFE---HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D+ + HRD+KP+NLL + G+ LK+ DFG A+
Sbjct: 118 DRRVLHRDLKPQNLLINREGE---------------------------LKIADFGLARAF 150
Query: 193 VSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPF--------- 242
T +Y AP+VL G KY + DIWS+G I ++ G P F
Sbjct: 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210
Query: 243 ---FSNHGQAISPGMKNRIRLGQFDFPNPE------WEH----VSQEAKTLIKNMLCVDP 289
F G S N L ++D PN WE + + L+ ML +DP
Sbjct: 211 MRIFRILGTPNSKNWPNVTELPKYD-PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDP 269
Query: 290 SERLTIDQVMENKWISQFN 308
++R+T Q +E+ + + N
Sbjct: 270 NQRITAKQALEHAYFKENN 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 52/304 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS------H 68
+DY++ I G G G+ +I K ++ K L + E E Q+ V
Sbjct: 6 EDYEVLYTI-GTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVSEVNLLREL 62
Query: 69 KHIVNIKDVYENIYNGSRC-LLVIMECMHGGELFQRIQQ--KEDGAFTEREAAIIMNEIC 125
KH NI Y+ I + + L ++ME GG+L I + KE E +M ++
Sbjct: 63 KH-PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 126 SAIKFLHDQN-----IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
A+K H ++ + HRD+KP N+ + +KL DFG + N
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILN----------- 167
Query: 181 LKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
D FAK+ V TPYY++PE + Y++ DIWSLG ++Y L P
Sbjct: 168 ---HDEDFAKEFVG----------TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 241 PFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
PF + + ++ +IR G+F + S E +I ML + R ++++++E
Sbjct: 215 PFTAFSQKELA----GKIREGKFRRIPYRY---SDELNEIITRMLNLKDYHRPSVEEILE 267
Query: 301 NKWI 304
N I
Sbjct: 268 NPLI 271
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 50/290 (17%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLH-DTVKARREV-----ELQLAVG-S 67
D ++I I G G GKV + + T ++YA+K ++ R EV ELQ+ G
Sbjct: 15 DHFEILRAI-GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +VN+ +++ + ++++ + GG+L +QQ + F E + + E+ A
Sbjct: 74 HPFLVNLWYSFQD----EEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMA 127
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +L +Q I HRD+KP+N+L + G + +TDF
Sbjct: 128 LDYLQNQRIIHRDMKPDNILL---------------------------DEHGHVHITDFN 160
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDK---YDKSCDIWSLGVIMYILLCGFPPFFS 244
A ++ + + T T Y+APE+ K Y + D WSLGV Y LL G P+
Sbjct: 161 IA-AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLT 294
+ S + + +P+ W SQE +L+K +L +P +R +
Sbjct: 220 RSSTS-SKEIVHTFETTVVTYPSA-W---SQEMVSLLKKLLEPNPDQRFS 264
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 147/350 (42%), Gaps = 65/350 (18%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVE-KKTSEVYALKVLHDTVKARREVELQLAV------ 65
+Q+ Y+I + LG G G+V+Q V+ ++ ALK++ + K + L++ V
Sbjct: 31 LQERYEIVS-TLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINE 89
Query: 66 ---GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
+ V + D ++ Y+G C + E + G F ++ + + +
Sbjct: 90 KDPDNKNLCVQMFDWFD--YHGHMC--ISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAF 144
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
++C A+KFLHD + H D+KPEN+L+ L D + ++
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRD--------ERSVKSTAVR 196
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+ DFG A + T T +Y APEV+ + + CD+WS+G I++ GF
Sbjct: 197 VVDFGSA---TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF-TL 252
Query: 243 FSNHGQAISPGMKNRI------RL------------GQFDFP-------------NPEWE 271
F H M RI R+ G+ D+ P
Sbjct: 253 FQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRR 312
Query: 272 HVSQEAKT------LIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPL 315
+++ EA+ LI++ML +P++RLT+ + +++ + ++ P L
Sbjct: 313 YLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKL 362
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 53/304 (17%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE---VELQ-LAVGSHK 69
+D ++I E LG G GKV + K+TS + A KV+ + E VE+ LA H
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 70 HIVNIKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+IV + D YEN L +++E GG + + + + TE + ++ + A
Sbjct: 95 NIVKLLDAFYYEN------NLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +LHD I HRD+K N+L+T GD +KL DFG
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTLDGD---------------------------IKLADFG 180
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL----GPDK-YDKSCDIWSLGVIMYILLCGFPPF 242
+ K + TPY++APEV+ D+ YD D+WSLG+ + + PP
Sbjct: 181 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
++P M+ +++ + + P + S K +K L + R T Q++++
Sbjct: 241 -----HELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 294
Query: 302 KWIS 305
+++
Sbjct: 295 PFVT 298
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 53/304 (17%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE---VELQ-LAVGSHK 69
+D ++I E LG G GKV + K+TS + A KV+ + E VE+ LA H
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 70 HIVNIKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+IV + D YEN L +++E GG + + + + TE + ++ + A
Sbjct: 95 NIVKLLDAFYYEN------NLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +LHD I HRD+K N+L+T GD +KL DFG
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTLDGD---------------------------IKLADFG 180
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL----GPDK-YDKSCDIWSLGVIMYILLCGFPPF 242
+ K + TPY++APEV+ D+ YD D+WSLG+ + + PP
Sbjct: 181 VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
++P M+ +++ + + P + S K +K L + R T Q++++
Sbjct: 241 -----HELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 294
Query: 302 KWIS 305
+++
Sbjct: 295 PFVT 298
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L + V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVL-MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELD-- 124
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+ ++ ++ IK LH I HRD+KP N++ VK +
Sbjct: 125 --HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+GV
Sbjct: 163 -------ATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 52/279 (18%)
Query: 41 SEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYENIYNGSRCLLVIMECMHG 97
+ V L D+V EV L VG+ H ++ + D +E +LV+ +
Sbjct: 67 NRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEG---FMLVLERPLPA 123
Query: 98 GELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGIL 157
+LF I +K G E + ++ +AI+ H + + HRD+K EN+L G
Sbjct: 124 QDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCA 179
Query: 158 KLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPD 217
KL DFG LL+ +P TDF + Y PE +
Sbjct: 180 KLIDFGS---GALLHDEP-------YTDFDGTR----------------VYSPPEWISRH 213
Query: 218 KYDK-SCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQE 276
+Y +WSLG+++Y ++CG PF + I + FP HVS +
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERD----------QEILEAELHFPA----HVSPD 259
Query: 277 AKTLIKNMLCVDPSERLTIDQVMENKWI-SQFNQVPQTP 314
LI+ L PS R ++++++ + W+ + VP P
Sbjct: 260 CCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNP 298
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 135/304 (44%), Gaps = 53/304 (17%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARRE---VELQ-LAVGSHK 69
+D ++I E LG G GKV + K+TS + A KV+ + E VE+ LA H
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 70 HIVNIKDV--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+IV + D YEN L +++E GG + + + + TE + ++ + A
Sbjct: 95 NIVKLLDAFYYEN------NLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDA 147
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +LHD I HRD+K N+L+T GD +KL DFG
Sbjct: 148 LNYLHDNKIIHRDLKAGNILFTLDGD---------------------------IKLADFG 180
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVL----GPDK-YDKSCDIWSLGVIMYILLCGFPPF 242
+ K TPY++APEV+ D+ YD D+WSLG+ + + PP
Sbjct: 181 VSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH 240
Query: 243 FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
++P M+ +++ + + P + S K +K L + R T Q++++
Sbjct: 241 -----HELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 294
Query: 302 KWIS 305
+++
Sbjct: 295 PFVT 298
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L + V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVL-MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELD-- 124
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+ ++ ++ IK LH I HRD+KP N++ VK +
Sbjct: 125 --HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+GV
Sbjct: 163 -------ATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALK---VLHDTVKARREVELQLAVGSHKHIVNIKDVY 78
E LG G G V + + K+T ++ A+K V D + +E+ + S H+V Y
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS-PHVVK----Y 89
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
Y + L ++ME G + I+ + + TE E A I+ +++LH H
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RD+K N+L G KL DFG A ++ A
Sbjct: 149 RDIKAGNILLNTEGHA---------------------------KLADFGVAGQLTDXMAK 181
Query: 199 LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG-QAISPGMKNR 257
TP+++APEV+ Y+ DIWSLG+ + G PP+ H +AI N
Sbjct: 182 RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN- 240
Query: 258 IRLGQFDFPNPE-WEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
F PE W S +K L P +R T Q++++ ++
Sbjct: 241 ---PPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 38/192 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH++IV++ DV E C ++ME + G L + I+ G + A N+I
Sbjct: 69 SHQNIVSMIDVDEE----DDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILD 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
IK HD I HRD+KP+N+L LK+ DF
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDS---------------------------NKTLKIFDF 155
Query: 187 GFAKKIVSNKASLQTPCY--TPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
G AK + S + QT T Y +PE + D+ DI+S+G+++Y +L G PPF
Sbjct: 156 GIAKAL-SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF-- 212
Query: 245 NHGQAISPGMKN 256
N A+S +K+
Sbjct: 213 NGETAVSIAIKH 224
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 72/289 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSDX-- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 --------TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ EH + +A+ L+ ML +DP++R+++D +++ +I+
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L + V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVL-MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------ATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 70 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 126
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 127 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 215 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 274
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 275 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 334
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 335 PPQIYDKQLDEREHTIEEWKEL 356
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 107 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 163
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 164 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 200
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 201 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 311
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 312 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 371
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 372 PPQIYDKQLDEREHTIEEWKEL 393
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 68 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 124
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 125 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 161
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 162 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 212
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 213 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 272
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 273 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 332
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 333 PPQIYDKQLDEREHTIEEWKEL 354
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 333
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPQIYDKQLDEREHTIEEWKEL 355
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 333
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPQIYDKQLDEREHTIEEWKEL 355
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 70 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 126
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 127 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 215 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 274
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 275 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 334
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 335 PPQIYDKQLDEREHTIEEWKEL 356
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 107 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH- 163
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 164 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 200
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 201 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 311
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 312 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 371
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 372 PPQIYDKQLDEREHTIEEWKEL 393
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 44/236 (18%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENI 81
+++G G G V Q ++ EV KVL D RE+++ + + H ++V++K + +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQI-MRIVKHPNVVDLKAFFYS- 103
Query: 82 YNGSR----CLLVIMECM-----HGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
NG + L +++E + + +++Q + + M ++ ++ ++H
Sbjct: 104 -NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK----LYMYQLLRSLAYIH 158
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL P G+LKL DFG AK +
Sbjct: 159 SIGICHRDIKPQNLLLDPPS--------------------------GVLKLIDFGSAKIL 192
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG 247
++ + ++ C + YY APE + G Y + DIWS G +M L+ G P F G
Sbjct: 193 IAGEPNVSXIC-SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG 247
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 63 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELDH- 119
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 120 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 156
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 157 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 207
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 208 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 267
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 268 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 327
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 328 PPQIYDKQLDEREHTIEEWKEL 349
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 62 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH- 118
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 119 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 155
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 156 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 326
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 327 PPQIYDKQLDEREHTIEEWKEL 348
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 63 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH- 119
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 120 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 156
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 157 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 207
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 208 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 267
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 268 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 327
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 328 PPQIYDKQLDEREHTIEEWKEL 349
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD-- 124
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+ ++ ++ IK LH I HRD+KP N++ VK +
Sbjct: 125 --HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV-----------------VKSDX-- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 --------TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IM------YILLCGF-----------------PPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 333
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPQIYDKQLDEREHTIEEWKEL 355
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 72/289 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSDX-- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 --------TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
+ EH + +A+ L+ ML +DP++R+++D +++ +I+
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD-- 124
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+ ++ ++ IK LH I HRD+KP N++ VK +
Sbjct: 125 --HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV-----------------VKSDX-- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 --------TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 333
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPQIYDKQLDEREHTIEEWKEL 355
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+++ +V+ + + + ++ME M L Q IQ + D
Sbjct: 62 RAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD-- 117
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+ ++ ++ IK LH I HRD+KP N++ VK +
Sbjct: 118 --HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIV-----------------VKSDX-- 156
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 157 --------TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 231 IM------YILLCG-----------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM IL G P F + ++NR + FP
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT--- 313
+ EH + +A+ L+ ML +DP++R+++D +++ +I+ + +
Sbjct: 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP 326
Query: 314 -PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 327 PPQIYDKQLDEREHTIEEWKEL 348
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------ATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 137/297 (46%), Gaps = 52/297 (17%)
Query: 22 EILG-LGINGKVLQIVEKKTSEVYALKVLHDTVKARRE---VELQ-LAVGSHKHIVNIKD 76
EI+G LG GKV + K+TS + A KV+ + E VE+ LA H +IV + D
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 77 V--YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
YEN L +++E GG + + + + TE + ++ + A+ +LHD
Sbjct: 75 AFYYEN------NLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+K N+L+T GD +KL DFG V +N + +
Sbjct: 128 KIIHRDLKAGNILFTLDGD---IKLADFG-VSAKN-------------------TRTXIQ 164
Query: 195 NKASLQTPCYTPYYVAPEVL----GPDK-YDKSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
+ S TPY++APEV+ D+ YD D+WSLG+ + + PP
Sbjct: 165 RRDSF---IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH-----HE 216
Query: 250 ISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWIS 305
++P M+ +++ + + P + S K +K L + R T Q++++ +++
Sbjct: 217 LNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 133/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L + V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVL-MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELD-- 124
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
+ ++ ++ IK LH I HRD+KP N++ VK +
Sbjct: 125 --HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------ATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 126/300 (42%), Gaps = 54/300 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVYE 79
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKFLHDQNI 136
+ + + + + E R+ + A + M ++ ++ ++H I
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KP+NLL D +LKL DFG AK++V +
Sbjct: 144 CHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQLVRGE 177
Query: 197 ASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG-------- 247
++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 178 PNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 248 QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPSERLT 294
+ + + +IR +F FP + W V + EA L +L P+ RLT
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 52/242 (21%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKAR------REVELQLAVGSHKHIVNI 74
++ILG G V + KKT +++A+KV ++ R RE E+ L +HK+IV +
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV-LKKLNHKNIVKL 72
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAIIMNEICSAIKFLHD 133
+ E +R ++IME G L+ +++ + E E I++ ++ + L +
Sbjct: 73 FAIEEE--TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HR++KP N++ DG + KLTDFG A+++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQ-----------------------SVYKLTDFGAARELE 167
Query: 194 SNKASLQTPCYTPYYVAPEVLGPD-------------KYDKSCDIWSLGVIMYILLCGFP 240
++ + Y E L PD KY + D+WS+GV Y G
Sbjct: 168 DDEQ------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221
Query: 241 PF 242
PF
Sbjct: 222 PF 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 35/275 (12%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAVGSHKHIVNIKD 76
LG G G V + ++++T EV A+K + D + RE+ + + H++IVN+ +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V + R + ++ + M +L I+ ++ ++ IK+LH +
Sbjct: 77 VLR--ADNDRDVYLVFDYMET-DLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KP N+L +K+ DFG + + + I L+ + ++
Sbjct: 131 LHRDMKPSNILLNAECH---VKVADFG--LSRSFVNIRRVTNNI-PLSINENTENFDDDQ 184
Query: 197 ASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMK 255
L T +Y APE+L G KY K D+WSLG I+ +LCG P F PG
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF---------PGSS 235
Query: 256 NRIRL----GQFDFP-NPEWEHV-SQEAKTLIKNM 284
+L G DFP N + E + S AKT+I+++
Sbjct: 236 TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESL 270
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 117
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 118 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 168
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 202
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 203 SAKQLVRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 321
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 322 EYTPTARLT 330
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 63/329 (19%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 95
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 151
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 152 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 185
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 186 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 244
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 245 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 304
Query: 291 ERLTIDQVMENKWISQFNQVPQTPLCTGK 319
RLT + + + + P L G+
Sbjct: 305 ARLTPLEACAHSFFDELRD-PNVKLPNGR 332
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 91
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 147
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 148 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 181
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 182 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 240
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 241 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 300
Query: 291 ERLT 294
RLT
Sbjct: 301 ARLT 304
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 102
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 158
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 159 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 192
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 193 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 251
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 252 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 311
Query: 291 ERLT 294
RLT
Sbjct: 312 ARLT 315
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 95
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 151
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 152 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 185
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 186 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 244
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 245 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 304
Query: 291 ERLT 294
RLT
Sbjct: 305 ARLT 308
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 52/242 (21%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKAR------REVELQLAVGSHKHIVNI 74
++ILG G V + KKT +++A+KV ++ R RE E+ L +HK+IV +
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV-LKKLNHKNIVKL 72
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAIIMNEICSAIKFLHD 133
+ E +R ++IME G L+ +++ + E E I++ ++ + L +
Sbjct: 73 FAIEEE--TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HR++KP N++ DG + KLTDFG A+++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQ-----------------------SVYKLTDFGAARELE 167
Query: 194 SNKASLQTPCYTPYYVAPEVLGPD-------------KYDKSCDIWSLGVIMYILLCGFP 240
++ + Y E L PD KY + D+WS+GV Y G
Sbjct: 168 DDEQ------FVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221
Query: 241 PF 242
PF
Sbjct: 222 PF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 84
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 140
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 141 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 174
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 175 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 233
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 234 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 293
Query: 291 ERLT 294
RLT
Sbjct: 294 ARLT 297
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 140 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 173
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 174 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292
Query: 291 ERLT 294
RLT
Sbjct: 293 ARLT 296
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 140 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 173
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 174 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292
Query: 291 ERLT 294
RLT
Sbjct: 293 ARLT 296
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 63/329 (19%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 87
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 143
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 144 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 177
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 178 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 236
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 237 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 296
Query: 291 ERLTIDQVMENKWISQFNQVPQTPLCTGK 319
RLT + + + + P L G+
Sbjct: 297 ARLTPLEACAHSFFDELRD-PNVKLPNGR 324
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 162
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 163 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 213
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 247
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 248 SAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 307 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 366
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 367 EYTPTARLT 375
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 117
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 118 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 168
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 202
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 203 SAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 262 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 321
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 322 EYTPTARLT 330
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 119
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 120 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 170
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 204
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 205 SAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 264 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 323
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 324 EYTPTARLT 332
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 88
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 89 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 139
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 173
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 174 SAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 233 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 292
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 293 EYTPTARLT 301
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 74 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 130
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 131 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 167
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ D+WS+G
Sbjct: 168 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGC 218
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++C P F + ++NR + + F
Sbjct: 219 IMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 278
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 279 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 338
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 339 PPKIPDKQLDEREHTIEEWKEL 360
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 121
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 122 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 172
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 206
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 207 SAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 266 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 325
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 326 EYTPTARLT 334
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 96
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 152
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 153 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 186
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 187 VRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 245
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 246 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 305
Query: 291 ERLT 294
RLT
Sbjct: 306 ARLT 309
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 72/309 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIK---- 75
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 111
Query: 76 -------DVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSA 127
+VY N+ L + E ++ + R +Q + + + M ++ +
Sbjct: 112 SSGEKKDEVYLNL-----VLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRS 162
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ ++H I HRD+KP+NLL D +LKL DFG
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFG 196
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNH 246
AK++V + ++ C + YY APE + G Y S D+WS G ++ LL G P F +
Sbjct: 197 SAKQLVRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Query: 247 G--------QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNML 285
G + + + +IR +F FP + W V + EA L +L
Sbjct: 256 GVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL 315
Query: 286 CVDPSERLT 294
P+ RLT
Sbjct: 316 EYTPTARLT 324
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 134/329 (40%), Gaps = 63/329 (19%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL D RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 140 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 173
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 174 VRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292
Query: 291 ERLTIDQVMENKWISQFNQVPQTPLCTGK 319
RLT + + + + P L G+
Sbjct: 293 ARLTPLEACAHSFFDELRD-PNVKLPNGR 320
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 70 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 126
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 127 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 163
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 164 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 274
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 275 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 334
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 335 PPKIPDKQLDEREHTIEEWKEL 356
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 63 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 119
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 120 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 156
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ D+WS+G
Sbjct: 157 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGC 207
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++C P F + ++NR + + F
Sbjct: 208 IMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 267
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 268 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 327
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 328 PPKIPDKQLDEREHTIEEWKEL 349
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 79/317 (24%)
Query: 26 LGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVY--ENIYN 83
LGIN V ++ ++ +A +A RE+ L L +HK+I+++ +V+ +
Sbjct: 48 LGINVAVKKLSRPFQNQTHA-------KRAYRELVL-LKCVNHKNIISLLNVFTPQKTLE 99
Query: 84 GSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKP 143
+ + ++ME M L Q I + D ER + ++ +C IK LH I HRD+KP
Sbjct: 100 EFQDVYLVMELMDAN-LCQVIHMELDH---ERMSYLLYQMLC-GIKHLHSAGIIHRDLKP 154
Query: 144 ENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTP- 202
N++ VK + LK+ DFG A+ +N + TP
Sbjct: 155 SNIV-----------------VKSD----------CTLKILDFGLARTACTN--FMMTPY 185
Query: 203 CYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-------------------F 243
T YY APEV+ Y + DIWS+G IM L+ G F
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 244 SNHGQAISPGMKNRIRLG------QFDFPNPEWEHVSQ---------EAKTLIKNMLCVD 288
+ A+ P ++N + +F+ P+W S+ +A+ L+ ML +D
Sbjct: 246 AEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVID 305
Query: 289 PSERLTIDQVMENKWIS 305
P +R+++D+ + + +I+
Sbjct: 306 PDKRISVDEALRHPYIT 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------CTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 139/317 (43%), Gaps = 79/317 (24%)
Query: 26 LGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVY--ENIYN 83
LGIN V ++ ++ +A +A RE+ L L +HK+I+++ +V+ +
Sbjct: 46 LGINVAVKKLSRPFQNQTHA-------KRAYRELVL-LKCVNHKNIISLLNVFTPQKTLE 97
Query: 84 GSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKP 143
+ + ++ME M L Q I + D ER + ++ +C IK LH I HRD+KP
Sbjct: 98 EFQDVYLVMELMDAN-LCQVIHMELDH---ERMSYLLYQMLC-GIKHLHSAGIIHRDLKP 152
Query: 144 ENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTP- 202
N++ VK + LK+ DFG A+ +N + TP
Sbjct: 153 SNIV-----------------VKSD----------CTLKILDFGLARTASTN--FMMTPY 183
Query: 203 CYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF-------------------F 243
T YY APEV+ Y ++ DIWS+G IM L+ G F
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 243
Query: 244 SNHGQAISPGMKNRIRLG------QFDFPNPEWEHVSQ---------EAKTLIKNMLCVD 288
+ A+ P ++N + F+ P+W S+ +A+ L+ ML +D
Sbjct: 244 AEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVID 303
Query: 289 PSERLTIDQVMENKWIS 305
P +R+++D+ + + +I+
Sbjct: 304 PDKRISVDEALRHPYIT 320
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + TP T YY APEV+ Y ++ DIWS+G
Sbjct: 163 -------CTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 273
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 274 LFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 333
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 334 PPKIPDKQLDEREHTIEEWKEL 355
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 54/308 (17%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVL---------HDTVKARREVELQLAVGSHKHIV 72
++LG G GKV ++++ +T A+K+L + ++E++L L HK+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL-LRRLRHKNVI 69
Query: 73 NIKDVYENIYNGSRCLLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ DV N + +V+ C+ G E+ + +K F +A ++ +++L
Sbjct: 70 QLVDVLYN-EEKQKMYMVMEYCVCGMQEMLDSVPEKR---FPVCQAHGYFCQLIDGLEYL 125
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H Q I H+D+KP NLL T GG LK++ G A+
Sbjct: 126 HSQGIVHKDIKPGNLLLTT---------------------------GGTLKISALGVAEA 158
Query: 192 IVSNKA--SLQTPCYTPYYVAPEVL-GPDKYDK-SCDIWSLGVIMYILLCGFPPFFSNHG 247
+ A + +T +P + PE+ G D + DIWS GV +Y + G PF G
Sbjct: 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF---EG 215
Query: 248 QAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQF 307
I +N I G + P +S L+K ML +P++R +I Q+ ++ W +
Sbjct: 216 DNIYKLFEN-IGKGSYAIPGDCGPPLSD----LLKGMLEYEPAKRFSIRQIRQHSWFRKK 270
Query: 308 NQVPQTPL 315
+ + P+
Sbjct: 271 HPPAEAPV 278
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 131/321 (40%), Gaps = 77/321 (23%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVI 231
LK+ DFG A+ ++ T YY APEV+ Y ++ DIWS+G I
Sbjct: 163 -------CTLKILDFGLAR-TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCI 214
Query: 232 MYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN- 267
M ++C P F + ++NR + + F
Sbjct: 215 MGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKL 274
Query: 268 -------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQT 313
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 314 PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 335 PKIPDKQLDEREHTIEEWKEL 355
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 140 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 173
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 174 VRGEPNVSXIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292
Query: 291 ERLT 294
RLT
Sbjct: 293 ARLT 296
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 45/289 (15%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHD-------TVKARREVELQLAVGSHKHIVNI 74
EI+G+G GKV + EV HD T++ R+ A+ H +I+ +
Sbjct: 13 EIIGIGGFGKVYRAFWIG-DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ V N L ++ME GG L + + K A+ +I + +LHD+
Sbjct: 72 RGVCLKEPN----LCLVMEFARGGPLNRVLSGKRIPPDILVNWAV---QIARGMNYLHDE 124
Query: 135 NIA---HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
I HRD+K N+L IL+ + GD+ + ILK+TDFG A++
Sbjct: 125 AIVPIIHRDLKSSNIL--------ILQKVENGDLSNK-----------ILKITDFGLARE 165
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
Y ++APEV+ + K D+WS GV+++ LL G PF G A++
Sbjct: 166 WHRTTKMSAAGAYA--WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA 223
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
G + + + P P + L+++ DP R + +++
Sbjct: 224 YG----VAMNKLALPIP--STCPEPFAKLMEDCWNPDPHSRPSFTNILD 266
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 131/321 (40%), Gaps = 77/321 (23%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 69 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDH- 125
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 126 --ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 162
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVI 231
LK+ DFG A+ ++ T YY APEV+ Y ++ D+WS+G I
Sbjct: 163 -------CTLKILDFGLAR-TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCI 214
Query: 232 MYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN- 267
M ++C P F + ++NR + + F
Sbjct: 215 MGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL 274
Query: 268 -------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQT 313
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 275 FPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPP 334
Query: 314 PLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 335 PKIPDKQLDEREHTIEEWKEL 355
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 42/297 (14%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK--ARREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 25 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 84 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 173
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
++ + A+ + T Y++PE L Y DIWS+G+ + + G P S G
Sbjct: 174 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
Query: 252 PGMKNRIRLGQFDFPNPEWEH--VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
+ + I + P P+ S E + + L +P+ER + Q+M + +I +
Sbjct: 232 FELLDYI----VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 284
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 56/235 (23%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLHDT-----VK--ARREVELQLAVGSHKHIVNIK 75
++G G G V++ K T + A+K ++ VK A RE++L L H+++VN+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL-LKQLRHENLVNLL 90
Query: 76 DV-------YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+V Y +L +E G +Q +Q+ + +I + I
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK-------------YLFQIINGI 137
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
F H NI HRD+KPEN+L ++ G++KL DFGF
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQ---------------------------SGVVKLCDFGF 170
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
A+ + + T +Y APE+L G KY K+ D+W++G ++ + G P F
Sbjct: 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 140 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 173
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 174 VRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292
Query: 291 ERLT 294
RLT
Sbjct: 293 ARLT 296
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 62/304 (20%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY- 78
T+++G G G V Q + E+ A+K VL RE+++ + H +IV ++ +
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL-DHCNIVRLRYFFY 83
Query: 79 ------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +Y V + R +Q + + + M ++ ++ ++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
I HRD+KP+NLL D +LKL DFG AK++
Sbjct: 140 SFGICHRDIKPQNLLLDP--------------------------DTAVLKLCDFGSAKQL 173
Query: 193 VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHG---- 247
V + ++ C + YY APE + G Y S D+WS G ++ LL G P F + G
Sbjct: 174 VRGEPNVSYIC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 248 ----QAISPGMKNRIR-----LGQFDFPNPE---WEHVSQ-----EAKTLIKNMLCVDPS 290
+ + + +IR +F FP + W V + EA L +L P+
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPT 292
Query: 291 ERLT 294
RLT
Sbjct: 293 ARLT 296
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 133/322 (41%), Gaps = 79/322 (24%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA 111
+A RE+ L V +HK+I+ + +V+ + + + ++ME M L Q IQ + D
Sbjct: 71 RAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD-- 126
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
ER + ++ +C IK LH I HRD+KP N++ VK +
Sbjct: 127 -HERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIV-----------------VKSD--- 164
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTP-CYTPYYVAPEVLGPDKYDKSCDIWSLGV 230
LK+ DFG A+ + + + P T YY APEV+ Y ++ DIWS+G
Sbjct: 165 -------CTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGC 215
Query: 231 IMYILLCG-----------------------FPPFFSNHGQAISPGMKNRIRLGQFDFPN 267
IM ++ G P F + ++NR + + F
Sbjct: 216 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEK 275
Query: 268 --------PEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVME----NKWISQFNQVPQ 312
+ EH + +A+ L+ ML +D S+R+++D+ ++ N W
Sbjct: 276 LFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP 335
Query: 313 TPLCTGKMLKEGEET---WPEV 331
P K L E E T W E+
Sbjct: 336 PPKIPDKQLDEREHTIEEWKEL 357
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 96 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDL--NRGELK 151
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 152 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 182
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 228
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 229 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 42/208 (20%)
Query: 120 IMNEICSAIKFLHDQN--IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGD 177
I + C A++ +H Q I HRD+K ENLL + + G +KL DFG
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS---NQGTIKLCDFGSATT---------- 187
Query: 178 GGILKLTDFGFA---KKIVSNKASLQTPCYTPYYVAPEVLGPDKYD-----KSCDIWSLG 229
I D+ ++ + +V + + T TP Y PE++ D Y + DIW+LG
Sbjct: 188 --ISHYPDYSWSAQRRALVEEEITRNT---TPMYRTPEII--DLYSNFPIGEKQDIWALG 240
Query: 230 VIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDP 289
I+Y+L PF G K RI G++ P + ++ +LI+ ML V+P
Sbjct: 241 CILYLLCFRQHPF--------EDGAKLRIVNGKYSIPPHDTQYTV--FHSLIRAMLQVNP 290
Query: 290 SERLTIDQVME--NKWISQFNQVPQTPL 315
ERL+I +V+ + + N P++P+
Sbjct: 291 EERLSIAEVVHQLQEIAAARNVNPKSPI 318
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 47/310 (15%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHI 71
+DDY++ E++G G V E A+K L + E+ ++ S H
Sbjct: 9 RDDYELQ-EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 67
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQ------QKEDGAFTEREAAIIMNEIC 125
NI Y + L ++M+ + GG + I+ + + G E A I+ E+
Sbjct: 68 PNIVSYYTSFVVKDE-LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+++LH HRDVK N+L G+ G +++ DFG + GD
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFG----VSAFLATGGD-------- 171
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIMYILLCGFPPFFS 244
I NK +T TP ++APEV+ + YD DIWS G+ L G P+
Sbjct: 172 ------ITRNKVR-KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEW-----EHVSQEAKTLIKNM-LCV--DPSERLTID 296
P MK + Q D P+ E E + + K+ K + LC+ DP +R T
Sbjct: 225 Y------PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAA 278
Query: 297 QVMENKWISQ 306
+++ +K+ +
Sbjct: 279 ELLRHKFFQK 288
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 52/289 (17%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ LA H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 69 RTLREIKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 124
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 125 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVAD---- 177
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 178 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
Query: 233 YILLCGFPPFFSNH---------GQAISP-------GMKNRIRLGQFDFP-------NPE 269
+L P F H G SP G+ + R P N
Sbjct: 221 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRL 280
Query: 270 WEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
+ + +A L+ ML +P +R+ ++Q + + +++Q+ P+
Sbjct: 281 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 47/310 (15%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKV--LHDTVKARREVELQLAVGSHKHI 71
+DDY++ E++G G V E A+K L + E+ ++ S H
Sbjct: 14 RDDYELQ-EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 72
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQ------QKEDGAFTEREAAIIMNEIC 125
NI Y + L ++M+ + GG + I+ + + G E A I+ E+
Sbjct: 73 PNIVSYYTSFVVKDE-LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+++LH HRDVK N+L G+ G +++ DFG + GD
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFG----VSAFLATGGD-------- 176
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIMYILLCGFPPFFS 244
I NK +T TP ++APEV+ + YD DIWS G+ L G P+
Sbjct: 177 ------ITRNKVR-KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEW-----EHVSQEAKTLIKNM-LCV--DPSERLTID 296
P MK + Q D P+ E E + + K+ K + LC+ DP +R T
Sbjct: 230 Y------PPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAA 283
Query: 297 QVMENKWISQ 306
+++ +K+ +
Sbjct: 284 ELLRHKFFQK 293
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 143 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 198
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 199 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 229
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 275
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 276 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 101 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 156
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 157 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 187
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 233
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 128 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 183
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 184 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 214
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 260
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 261 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 100 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 155
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 156 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 186
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 232
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 233 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 143 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 198
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 199 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 229
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 275
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 276 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 99 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 154
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 155 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 185
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 231
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 232 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 101 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 156
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 157 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 187
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 233
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 115 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 170
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 171 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 201
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 247
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 248 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 100 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 155
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 156 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 186
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 232
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 233 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 60/296 (20%)
Query: 50 HDTVKARREVELQLAVG-SHKHIVNIKDVYE-NIYNGSRCLLVIMECMHGGELFQRIQQK 107
H T R E+Q+ + H++++ I+D+ + R + ++ + M +L++ ++ +
Sbjct: 81 HQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQ 139
Query: 108 EDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK- 166
+ + + +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 140 Q---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARI 193
Query: 167 --PENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSC 223
PE+ GF + V+ + +Y APE++ K Y KS
Sbjct: 194 ADPEH--------------DHTGFLTEXVATR----------WYRAPEIMLNSKGYTKSI 229
Query: 224 DIWSLGVIMYILLCGFPPFFSNH---------GQAISPG---------MKNRIRLGQFDF 265
DIWS+G I+ +L P F H G SP MK R L
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPS 289
Query: 266 PNP-EWEHV----SQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
W + +A L+ ML +P++R+T+++ + + ++ Q+ P+
Sbjct: 290 KTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVA 345
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 74/321 (23%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHD-----TVKARREVELQLAVGSHKHIVNI 74
E +G G G V + ++T E+ ALK L D A RE+ L L HK+IV +
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICL-LKELKHKNIVRL 66
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKFL 131
DV +++ + LV C Q +++ D + + I+ + ++ + F
Sbjct: 67 HDV---LHSDKKLTLVFEFCD------QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H +N+ HRD+KP+NLL + G+ LKL DFG A+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGE---------------------------LKLADFGLARA 150
Query: 192 IVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
T +Y P+VL G Y S D+WS G I L P F G +
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFP--GNDV 208
Query: 251 SPGMKNRIRL----GQFDFPN----PEWE----------------HVSQEAKTLIKNMLC 286
+K RL + +P+ P+++ ++ + L++N+L
Sbjct: 209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK 268
Query: 287 VDPSERLTIDQVMENKWISQF 307
+P +R++ ++ +++ + S F
Sbjct: 269 CNPVQRISAEEALQHPYFSDF 289
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 96 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 151
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 152 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 182
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 228
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 101 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 156
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 157 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 187
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 233
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 234 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 135 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 190
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 191 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 221
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 267
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 268 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 116 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 171
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 172 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 202
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 248
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 249 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 143 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 198
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 199 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 229
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 275
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 276 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 148 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 203
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 204 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 234
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 280
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 281 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 116 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 171
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 172 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 202
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 248
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 249 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 123 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 178
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 179 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 209
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 255
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 256 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 115 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 170
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 171 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 201
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 247
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 248 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 57/293 (19%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKD----VYE 79
+G G G V + + SEV A+K + + K E + Q + + + ++ Y
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 80 NIYNGSRCLLVIME-CMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
Y ++ME C+ + +K E E A + + + +LH N+ H
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RDVK N+L ++PG ++KL DFG AS
Sbjct: 178 RDVKAGNILLSEPG---------------------------LVKLGDFG--------SAS 202
Query: 199 LQTPCY----TPYYVAPEV---LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ P TPY++APEV + +YD D+WSLG+ L PP F+ +
Sbjct: 203 IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----- 257
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
M + Q + P + H S+ + + + L P +R T + +++++++
Sbjct: 258 -AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 57/293 (19%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKD----VYE 79
+G G G V + + SEV A+K + + K E + Q + + + ++ Y
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 80 NIYNGSRCLLVIME-CMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAH 138
Y ++ME C+ + +K E E A + + + +LH N+ H
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RDVK N+L ++PG ++KL DFG AS
Sbjct: 139 RDVKAGNILLSEPG---------------------------LVKLGDFG--------SAS 163
Query: 199 LQTPCY----TPYYVAPEV---LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
+ P TPY++APEV + +YD D+WSLG+ L PP F+ +
Sbjct: 164 IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN----- 218
Query: 252 PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
M + Q + P + H S+ + + + L P +R T + +++++++
Sbjct: 219 -AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 128 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 183
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 184 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 214
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 260
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 261 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 128 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 183
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 184 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 214
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 260
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 261 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 96 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 151
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 152 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 182
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 228
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 129 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 184
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 185 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 215
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 261
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 262 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 129 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 184
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 185 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 215
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 261
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 262 SECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ LA H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 69 RTLREIKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 124
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 125 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 177
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 178 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 221 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + +++Q+ P+
Sbjct: 281 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEA 329
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 52/227 (22%)
Query: 108 EDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKP 167
E G E A + M ++ +K++H N+ HRD+KP NL +
Sbjct: 113 EQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF-----------------INT 155
Query: 168 ENLLYTKPGDGGILKLTDFGFAKKI---VSNKASLQTPCYTPYYVAPE-VLGPDKYDKSC 223
E+L +LK+ DFG A+ + S+K L T +Y +P +L P+ Y K+
Sbjct: 156 EDL---------VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI 206
Query: 224 DIWSLGVIMYILLCGFPPFFSNHG----QAISPGM-----KNRIRLGQF-------DFPN 267
D+W+ G I +L G F H Q I + ++R L D
Sbjct: 207 DMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE 266
Query: 268 PE------WEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
P +S+EA ++ +L P +RLT ++ + + ++S ++
Sbjct: 267 PHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 129 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 184
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 185 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 215
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 261
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 262 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 129 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 184
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 185 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 215
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 261
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 262 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + ++ + G +L++ ++ + +
Sbjct: 87 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LS 142
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 143 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLAR-----VA 194
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 195 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 239 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 299 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 124/326 (38%), Gaps = 67/326 (20%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH--------DTVK--ARREVELQLAVGSHKHI 71
+ LG G V + +K T+++ A+K + D + A RE++L L SH +I
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL-LQELSHPNI 74
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ + D + + N S ++ + M + I + T M +++L
Sbjct: 75 IGLLDAFGHKSNIS----LVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I HRD+KP NLL + G+LKL DFG AK
Sbjct: 129 HQHWILHRDLKPNNLLLD---------------------------ENGVLKLADFGLAKS 161
Query: 192 IVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFP---------- 240
S + T +Y APE+L G Y D+W++G I+ LL P
Sbjct: 162 FGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 221
Query: 241 --PFFSNHGQAISPGMKNRIRLGQF----DFPNPEWEHVSQEAK----TLIKNMLCVDPS 290
F G + L + FP H+ A LI+ + +P
Sbjct: 222 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPC 281
Query: 291 ERLTIDQVMENKWISQFNQVPQTPLC 316
R+T Q ++ K+ S N+ TP C
Sbjct: 282 ARITATQALKMKYFS--NRPGPTPGC 305
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 128 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 183
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 184 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 214
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I GQ F + VS
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEIIG--------GQVFFR----QRVS 260
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + PS+R T +++ + W+
Sbjct: 261 XECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 57/255 (22%)
Query: 59 VELQLAVGS---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER 115
V L++A+ S H +I+ + D++EN LV+ + G +LF I + E
Sbjct: 76 VTLEIAILSRVEHANIIKVLDIFEN---QGFFQLVMEKHGSGLDLFAFIDRHPR--LDEP 130
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
A+ I ++ SA+ +L ++I HRD+K EN++ + DF
Sbjct: 131 LASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE----------DF------------- 167
Query: 176 GDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKY-DKSCDIWSLGVIMYI 234
+KL DFG A + K T C T Y APEVL + Y ++WSLGV +Y
Sbjct: 168 ----TIKLIDFGSAAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYT 222
Query: 235 LLCGFPPFF---SNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
L+ PF AI P VS+E +L+ +L P
Sbjct: 223 LVFEENPFCELEETVEAAIHPPY-----------------LVSKELMSLVSGLLQPVPER 265
Query: 292 RLTIDQVMENKWISQ 306
R T+++++ + W++Q
Sbjct: 266 RTTLEKLVTDPWVTQ 280
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 74/321 (23%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKV--LHD-----TVKARREVELQLAVGSHKHIVNI 74
E +G G G V + ++T E+ ALK L D A RE+ L L HK+IV +
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICL-LKELKHKNIVRL 66
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKFL 131
DV +++ + LV C Q +++ D + + I+ + ++ + F
Sbjct: 67 HDV---LHSDKKLTLVFEFCD------QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H +N+ HRD+KP+NLL + G+ LKL +FG A+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGE---------------------------LKLANFGLARA 150
Query: 192 IVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
T +Y P+VL G Y S D+WS G I L P F G +
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP--GNDV 208
Query: 251 SPGMKNRIRL----GQFDFPN----PEWE----------------HVSQEAKTLIKNMLC 286
+K RL + +P+ P+++ ++ + L++N+L
Sbjct: 209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK 268
Query: 287 VDPSERLTIDQVMENKWISQF 307
+P +R++ ++ +++ + S F
Sbjct: 269 CNPVQRISAEEALQHPYFSDF 289
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 135/342 (39%), Gaps = 83/342 (24%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD------TVKARREVELQLAVG 66
I D+ + + +LG G G V K T E+ A+K + ++ RE+++ L
Sbjct: 9 ISSDFQLKS-LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI-LKHF 66
Query: 67 SHKHIVNI-----KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIM 121
H++I+ I D +EN + +I E M +L + I + ++ +
Sbjct: 67 KHENIITIFNIQRPDSFENFNE----VYIIQELMQT-DLHRVISTQ---MLSDDHIQYFI 118
Query: 122 NEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGIL 181
+ A+K LH N+ HRD+KP NLL D L
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---------------------------L 151
Query: 182 KLTDFGFAKKIVSNKASLQTP----------CYTPYYVAPEV-LGPDKYDKSCDIWSLGV 230
K+ DFG A+ I + A P T +Y APEV L KY ++ D+WS G
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 231 IMYILLCGFPPFFSN---------HGQAISPGMKNRIRLGQFD-----------FPNPEW 270
I+ L P F G +P N +R + +P
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 271 E----HVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
E V+ + L++ ML DP++R+T + +E+ ++ ++
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 69/342 (20%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALK-------VLHDTVKARREVELQLAV 65
+ D+Y+I E +G G G V + T + A+K V+ + + RE+++ L
Sbjct: 52 VGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI-LKH 109
Query: 66 GSHKHIVNIKDVYENI--YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNE 123
H +I+ IKD+ Y + + V+++ M +L Q I + T + +
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ--PLTLEHVRYFLYQ 166
Query: 124 ICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKL 183
+ +K++H + HRD+KP NLL + + LK+
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNENCE---------------------------LKI 199
Query: 184 TDFGFAKKIVSNKASLQ----TPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG 238
DFG A+ + ++ A Q T +Y APE+ L +Y ++ D+WS+G I +L
Sbjct: 200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259
Query: 239 FPPF----FSNHGQAI-------SPGM-----KNRIRLGQFDFPNPE---WEHV----SQ 275
F + + Q I SP + R+R P + WE V +
Sbjct: 260 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR 319
Query: 276 EAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCT 317
+A +L+ ML +PS R++ + + ++++++ P C
Sbjct: 320 QALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCA 361
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 135/342 (39%), Gaps = 83/342 (24%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD------TVKARREVELQLAVG 66
I D+ + + +LG G G V K T E+ A+K + ++ RE+++ L
Sbjct: 9 ISSDFQLKS-LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI-LKHF 66
Query: 67 SHKHIVNI-----KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIM 121
H++I+ I D +EN + +I E M +L + I + ++ +
Sbjct: 67 KHENIITIFNIQRPDSFENFNE----VYIIQELMQT-DLHRVISTQ---MLSDDHIQYFI 118
Query: 122 NEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGIL 181
+ A+K LH N+ HRD+KP NLL D L
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---------------------------L 151
Query: 182 KLTDFGFAKKIVSNKASLQTP----------CYTPYYVAPEV-LGPDKYDKSCDIWSLGV 230
K+ DFG A+ I + A P T +Y APEV L KY ++ D+WS G
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 231 IMYILLCGFPPFFSN---------HGQAISPGMKNRIRLGQFD-----------FPNPEW 270
I+ L P F G +P N +R + +P
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 271 E----HVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
E V+ + L++ ML DP++R+T + +E+ ++ ++
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 51/210 (24%)
Query: 99 ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILK 158
+LF I ++ GA E A ++ A++ H+ + HRD+K EN+L + G LK
Sbjct: 116 DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELK 171
Query: 159 LTDFGDVKPENLLYTKPGDGGILK---LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG 215
L DF G G +LK TDF T Y+P PE +
Sbjct: 172 LIDF-------------GSGALLKDTVYTDFD------------GTRVYSP----PEWIR 202
Query: 216 PDKYD-KSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVS 274
+Y +S +WSLG+++Y ++CG PF H + I IR GQ F + VS
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-------IR-GQVFFR----QRVS 248
Query: 275 QEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
E + LI+ L + P +R T +++ + W+
Sbjct: 249 XECQHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 135/342 (39%), Gaps = 83/342 (24%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHD------TVKARREVELQLAVG 66
I D+ + + +LG G G V K T E+ A+K + ++ RE+++ L
Sbjct: 9 ISSDFQLKS-LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI-LKHF 66
Query: 67 SHKHIVNI-----KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIM 121
H++I+ I D +EN + +I E M +L + I + ++ +
Sbjct: 67 KHENIITIFNIQRPDSFENFNE----VYIIQELMQT-DLHRVISTQ---MLSDDHIQYFI 118
Query: 122 NEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGIL 181
+ A+K LH N+ HRD+KP NLL D L
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCD---------------------------L 151
Query: 182 KLTDFGFAKKIVSNKASLQTP----------CYTPYYVAPEV-LGPDKYDKSCDIWSLGV 230
K+ DFG A+ I + A P T +Y APEV L KY ++ D+WS G
Sbjct: 152 KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 231 IMYILLCGFPPFFSN---------HGQAISPGMKNRIRLGQFD-----------FPNPEW 270
I+ L P F G +P N +R + +P
Sbjct: 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 271 E----HVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFN 308
E V+ + L++ ML DP++R+T + +E+ ++ ++
Sbjct: 272 EKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVNIKDVYEN 80
++LG G G ++ +V ++L + A REV+L H +++ Y
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIR----YFC 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+ + +E + L + ++QK D A E ++ + S + LH NI HRD
Sbjct: 86 TEKDRQFQYIAIE-LCAATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRD 143
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+KP N+L + P G +K ++DFG KK+ + S
Sbjct: 144 LKPHNILISMPNAHGKIKAM----------------------ISDFGLCKKLAVGRHSFS 181
Query: 201 TPCYTP---YYVAPEVLGPDKYDK---SCDIWSLGVIMYILLC-GFPPFFSNHGQAISPG 253
P ++APE+L D + + DI+S G + Y ++ G PF G+++
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF----GKSLQRQ 237
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
+ D +PE +H A+ LI+ M+ +DP +R + V+++ +
Sbjct: 238 ANILLGACSLDCLHPE-KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 69/342 (20%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYALK-------VLHDTVKARREVELQLAV 65
+ D+Y+I E +G G G V + T + A+K V+ + + RE+++ L
Sbjct: 53 VGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI-LKH 110
Query: 66 GSHKHIVNIKDVYENI--YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNE 123
H +I+ IKD+ Y + + V+++ M +L Q I + T + +
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ--PLTLEHVRYFLYQ 167
Query: 124 ICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKL 183
+ +K++H + HRD+KP NLL + + LK+
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNENCE---------------------------LKI 200
Query: 184 TDFGFAKKIVSNKASLQ----TPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG 238
DFG A+ + ++ A Q T +Y APE+ L +Y ++ D+WS+G I +L
Sbjct: 201 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 260
Query: 239 FPPF----FSNHGQAI-------SPGM-----KNRIRLGQFDFPNPE---WEHV----SQ 275
F + + Q I SP + R+R P + WE V +
Sbjct: 261 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR 320
Query: 276 EAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCT 317
+A +L+ ML +PS R++ + + ++++++ P C
Sbjct: 321 QALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCA 362
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 50/304 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 6 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 65 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
++ + A+ + T Y++PE L Y DIWS+G+ + + G P + S
Sbjct: 155 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
Query: 252 PGMKNRIRLGQFDF-------PNPEWEH--VSQEAKTLIKNMLCVDPSERLTIDQVMENK 302
R + F+ P P+ S E + + L +P+ER + Q+M +
Sbjct: 213 -----RPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 267
Query: 303 WISQ 306
+I +
Sbjct: 268 FIKR 271
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 38/264 (14%)
Query: 41 SEVYALKVL-----HDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECM 95
YALK + D +A+RE ++ + +H +I+ + +++
Sbjct: 54 GHFYALKRILCHEQQDREEAQREADMH-RLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112
Query: 96 HGGELFQRIQQ-KEDGAF-TEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGD 153
G L+ I++ K+ G F TE + ++ IC ++ +H + AHRD+KP N+L GD
Sbjct: 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GD 169
Query: 154 GGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEV 213
G L D G + + ++ + G L L D+ + +S Y APE+
Sbjct: 170 EGQPVLMDLGSMN-QACIHVE-GSRQALTLQDWAAQRCTIS-------------YRAPEL 214
Query: 214 LGPDKY---DKSCDIWSLGVIMYILLCGFPPF--FSNHGQAISPGMKNRIRLGQFDFPNP 268
+ D+ D+WSLG ++Y ++ G P+ G +++ ++N++ + P
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI-------P 267
Query: 269 EWEHVSQEAKTLIKNMLCVDPSER 292
+ S L+ +M+ VDP +R
Sbjct: 268 QSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 66/301 (21%)
Query: 50 HDTVKAR--REVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQK 107
H T R RE+++ L H++I+ I D+ + I++ + +L++ ++ +
Sbjct: 65 HQTYXQRTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ 123
Query: 108 EDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKP 167
+ + +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 124 H---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 177
Query: 168 ENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIW 226
+ P GF + V+ T +Y APE++ K Y KS DIW
Sbjct: 178 AD-----PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIW 216
Query: 227 SLGVIMYILLCGFPPFFSNH---------GQAISPGM--------------------KNR 257
S+G I+ +L P F H G SP KN+
Sbjct: 217 SVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 276
Query: 258 IRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCT 317
+ + FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 277 VPWNRL-FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAE 330
Query: 318 G 318
Sbjct: 331 A 331
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 38/238 (15%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDT-------VKARREVEL--QLAVGS 67
Y+ EI G+G G V + + + ALK + + REV L +L
Sbjct: 6 YEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H ++V + DV + ++ +L + + +M +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ FLH I HRD+KPEN+L T GG +KL DFG
Sbjct: 125 LDFLHANCIVHRDLKPENILVTS---------------------------GGTVKLADFG 157
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
A +I S + +L T +Y APEVL Y D+WS+G I + P F N
Sbjct: 158 LA-RIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 67 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 122
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLAR-----VA 174
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 175 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 219 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 279 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 38/238 (15%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDT-------VKARREVEL--QLAVGS 67
Y+ EI G+G G V + + + ALK + + REV L +L
Sbjct: 6 YEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H ++V + DV + ++ +L + + +M +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ FLH I HRD+KPEN+L T GG +KL DFG
Sbjct: 125 LDFLHANCIVHRDLKPENILVTS---------------------------GGTVKLADFG 157
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
A +I S + +L T +Y APEVL Y D+WS+G I + P F N
Sbjct: 158 LA-RIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 75/340 (22%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVY-ALKVLHDTVKARREVELQLAVGSHKHIVNIK 75
Y+I + LG G GKV++ ++ K + A+K++ + + ++ V H + +
Sbjct: 16 YEI-VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 76 DVYENI-------YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI--IMNEICS 126
+ + ++G C ++ E + G + I KE+G R I + +IC
Sbjct: 75 STFRCVQMLEWFEHHGHIC--IVFELL-GLSTYDFI--KENGFLPFRLDHIRKMAYQICK 129
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGD-----VKPENLLYTKPGDGGIL 181
++ FLH + H D+KPEN+L+ + +D+ + +K + P +
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQ---------SDYTEAYNPKIKRDERTLINPD----I 176
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
K+ DFG A + ++L + T +Y APEV+ + + CD+WS+G I+ GF
Sbjct: 177 KVVDFGSATYDDEHHSTLVS---TRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF-T 232
Query: 242 FFSNHGQAISPGMKNRI-------------RLGQFDFPNPEWE-------HVSQEAK--- 278
F H M RI + F +W+ +VS+ K
Sbjct: 233 VFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK 292
Query: 279 --------------TLIKNMLCVDPSERLTIDQVMENKWI 304
LI+ ML DP++R+T+ + +++ +
Sbjct: 293 EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 67 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 122
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVAD---- 175
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 176 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 219 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 279 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVE--KKTSEVYALKVLHDTVKARREVELQLAV----- 65
+Q+ Y+I LG G GKV++ ++ + S+V ALK++ + K R L++ V
Sbjct: 17 LQERYEIVGN-LGEGTFGKVVECLDHARGKSQV-ALKIIRNVGKYREAARLEINVLKKIK 74
Query: 66 ---GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
+K + + + N ++G C + E + G F+ +++ + +
Sbjct: 75 EKDKENKFLCVLMSDWFN-FHGHMC--IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 130
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPEN-LLYTKPGDGGIL 181
++C A++FLH+ + H D+KPEN+L+ ++F + E+ K +
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVN---------SEFETLYNEHKSCEEKSVKNTSI 181
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ DFG A + T T +Y PEV+ + + CD+WS+G I++ GF
Sbjct: 182 RVADFGSA---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 238
Query: 242 F 242
F
Sbjct: 239 F 239
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 67 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 122
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLAR-----VA 174
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 175 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 219 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 279 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVE--KKTSEVYALKVLHDTVKARREVELQLAV----- 65
+Q+ Y+I LG G GKV++ ++ + S+V ALK++ + K R L++ V
Sbjct: 49 LQERYEIVGN-LGEGTFGKVVECLDHARGKSQV-ALKIIRNVGKYREAARLEINVLKKIK 106
Query: 66 ---GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
+K + + + N ++G C + E + G F+ +++ + +
Sbjct: 107 EKDKENKFLCVLMSDWFN-FHGHMC--IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 162
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPEN-LLYTKPGDGGIL 181
++C A++FLH+ + H D+KPEN+L+ ++F + E+ K +
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVN---------SEFETLYNEHKSCEEKSVKNTSI 213
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ DFG A + T T +Y PEV+ + + CD+WS+G I++ GF
Sbjct: 214 RVADFGSA---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 270
Query: 242 F 242
F
Sbjct: 271 F 271
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 71 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 126
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 127 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLAR-----VA 178
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 179 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 223 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 283 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 29/241 (12%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVE--KKTSEVYALKVLHDTVKARREVELQLAV----- 65
+Q+ Y+I LG G GKV++ ++ + S+V ALK++ + K R L++ V
Sbjct: 26 LQERYEIVGN-LGEGTFGKVVECLDHARGKSQV-ALKIIRNVGKYREAARLEINVLKKIK 83
Query: 66 ---GSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
+K + + + N ++G C + E + G F+ +++ + +
Sbjct: 84 EKDKENKFLCVLMSDWFN-FHGHMC--IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAY 139
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPEN-LLYTKPGDGGIL 181
++C A++FLH+ + H D+KPEN+L+ ++F + E+ K +
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVN---------SEFETLYNEHKSCEEKSVKNTSI 190
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ DFG A + T T +Y PEV+ + + CD+WS+G I++ GF
Sbjct: 191 RVADFGSA---TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 247
Query: 242 F 242
F
Sbjct: 248 F 248
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 38/238 (15%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDT-------VKARREVEL--QLAVGS 67
Y+ EI G+G G V + + + ALK + + REV L +L
Sbjct: 6 YEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H ++V + DV + ++ +L + + +M +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ FLH I HRD+KPEN+L T GG +KL DFG
Sbjct: 125 LDFLHANCIVHRDLKPENILVTS---------------------------GGTVKLADFG 157
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSN 245
A +I S + +L T +Y APEVL Y D+WS+G I + P F N
Sbjct: 158 LA-RIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 75 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 130
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 131 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLAR-----VA 182
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 183 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 226
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 227 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 286
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 287 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 335
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 67 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 122
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLAR-----VA 174
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 175 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 219 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 279 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 70/331 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKAR--REVELQLAVGSHKHIVNIKDV 77
+G G G V + A+K + H T R RE+++ L H++I+ I D+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDI 109
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
+ I++ + +L++ ++ + + + +I +K++H N+
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSANVL 166
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
HRD+KP NLL D LK+ DFG + P GF + V+
Sbjct: 167 HRDLKPSNLLLNTTCD---LKICDFGLAR-----VADPDHDHT------GFLTEYVA--- 209
Query: 198 SLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIMYILLCGFPPFFSNH---------G 247
T +Y APE++ K Y KS DIWS+G I+ +L P F H G
Sbjct: 210 -------TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Query: 248 QAISPGM--------------------KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCV 287
SP KN++ + FPN + +A L+ ML
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL-FPNAD-----SKALDLLDKMLTF 316
Query: 288 DPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
+P +R+ ++Q + + ++ Q+ P+
Sbjct: 317 NPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 347
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREV---ELQLAVGSHKHIVNIKDVYE 79
+LG G G+V++ S YA+K + T + + + LA +H+++V +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 80 NIYNGSR---------CLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
N + L + ME G L+ I E+ E + +I A+ +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSY 131
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
+H Q I HRD+KP N+ + + +K+ DFG K + + D ILKL ++
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVH----RSLD--ILKLD----SQ 178
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
+ + +L + T YVA EVL G Y++ D++SLG+I + ++ F
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPF---------- 228
Query: 250 ISPGMKN-----RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
S GM+ ++R +FP ++ + K +I+ ++ DP++R ++ + W+
Sbjct: 229 -STGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 67 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 122
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 123 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 175
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 176 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 219 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 279 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 327
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 133/331 (40%), Gaps = 70/331 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKAR--REVELQLAVGSHKHIVNIKDV 77
+G G G V + A+K + H T R RE+++ L H++I+ I D+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDI 91
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
+ I++ + +L++ ++ + + + +I +K++H N+
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSANVL 148
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
HRD+KP NLL D LK+ DFG + + P GF + V+
Sbjct: 149 HRDLKPSNLLLNTTCD---LKICDFGLARVAD-----PDHDHT------GFLTEYVA--- 191
Query: 198 SLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIMYILLCGFPPFFSNH---------G 247
T +Y APE++ K Y KS DIWS+G I+ +L P F H G
Sbjct: 192 -------TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
Query: 248 QAISPGM--------------------KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCV 287
SP KN++ + FPN + +A L+ ML
Sbjct: 245 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL-FPNAD-----SKALDLLDKMLTF 298
Query: 288 DPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
+P +R+ ++Q + + ++ Q+ P+
Sbjct: 299 NPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 329
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 65 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 120
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 121 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 173
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 174 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 216
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 217 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 277 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 72 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 127
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 128 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 180
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 181 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 223
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 224 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 284 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 73 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 128
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 129 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 181
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 182 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 224
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 225 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 284
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 285 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 333
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 64 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 119
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 120 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 172
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 173 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 215
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 216 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 275
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 276 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 324
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 71 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 126
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 127 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 179
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 180 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 223 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 283 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 71 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 126
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG + +
Sbjct: 127 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVAD---- 179
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 180 -PDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 223 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 283 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 71/306 (23%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVY-- 78
E++G G G+V + + + Y ++ V ++ KA REV+ LA H +IV+ +
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK-ALAKLDHVNIVHYNGCWDG 76
Query: 79 -------------------ENIYNGSR----CLLVIMECMHGGELFQRIQQKEDGAFTER 115
EN N SR CL + ME G L Q I+++ +
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
A + +I + ++H + + HRD+KP N+ D +K+ DFG L+ +
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV---DTKQVKIGDFG------LVTSLK 187
Query: 176 GDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYIL 235
DG K +K +L+ Y++PE + Y K D+++LG+I+ L
Sbjct: 188 NDG------------KRTRSKGTLR-------YMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 236 L--CGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERL 293
L C S + G+ + I FD ++ KTL++ +L P +R
Sbjct: 229 LHVCDTAFETSKFFTDLRDGIISDI----FD----------KKEKTLLQKLLSKKPEDRP 274
Query: 294 TIDQVM 299
+++
Sbjct: 275 NTSEIL 280
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 77/262 (29%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVYEN-- 80
LG G G V ++ + ++ + +ALK VL D RE+++ + V H +I+ + D +
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDI-MKVLDHVNIIKLVDYFYTTG 73
Query: 81 ------------------------------IYNGS--RCLLVIMECMHGGELFQRIQQKE 108
I N S + L VIME + + ++ +
Sbjct: 74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV--PDTLHKVLK-- 129
Query: 109 DGAFTEREAAIIMN-------EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTD 161
+F +I MN ++ A+ F+H I HRD+KP+NLL
Sbjct: 130 --SFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN------------ 175
Query: 162 FGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEV-LGPDKYD 220
LKL DFG AKK++ ++ S+ C + +Y APE+ LG +Y
Sbjct: 176 --------------SKDNTLKLCDFGSAKKLIPSEPSVAXIC-SRFYRAPELMLGATEYT 220
Query: 221 KSCDIWSLGVIMYILLCGFPPF 242
S D+WS+G + L+ G P F
Sbjct: 221 PSIDLWSIGCVFGELILGKPLF 242
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 91/241 (37%), Gaps = 41/241 (17%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDT----------VKARREVEL--QLA 64
Y+ EI G+G G V + + + ALK + + REV L +L
Sbjct: 11 YEPVAEI-GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 65 VGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H ++V + DV + ++ +L + + +M +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ FLH I HRD+KPEN+L T GG +KL
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKLA 162
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
DFG A +I S + +L T +Y APEVL Y D+WS+G I + P F
Sbjct: 163 DFGLA-RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 221
Query: 245 N 245
N
Sbjct: 222 N 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 71 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 126
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 127 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLAR-----VA 178
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 179 DPDHDHT------GFLXEXVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 223 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 283 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 72 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 127
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 128 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLAR-----VA 179
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 180 DPDHDHT------GFLXEXVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 223
Query: 233 YILLCGFPPFFSNH---------GQAISPGM--------------------KNRIRLGQF 263
+L P F H G SP KN++ +
Sbjct: 224 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 284 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 332
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 64/295 (21%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+++ L H++I+ I D+ + I++ + +L++ ++ + +
Sbjct: 65 RTLREIKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LS 120
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ +I +K++H N+ HRD+KP NLL D LK+ DFG +
Sbjct: 121 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLAR-----VA 172
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
P GF + V+ T +Y APE++ K Y KS DIWS+G I+
Sbjct: 173 DPDHDHT------GFLTEYVA----------TRWYRAPEIMLNSKGYTKSIDIWSVGCIL 216
Query: 233 YILLCGFPPFFSNH-----------------------------GQAISPGMKNRIRLGQF 263
+L P F H +S KN++ +
Sbjct: 217 AEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
FPN + +A L+ ML +P +R+ ++Q + + ++ Q+ P+
Sbjct: 277 -FPNAD-----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 325
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 54/234 (23%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAVGSHKHI 71
+S +G G G V ++K++ E A+K L +A RE+ L L H+++
Sbjct: 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL-LLLKHMQHENV 103
Query: 72 VNIKDVY------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+ + DV+ N Y+ ++M M Q+I E F+E + ++ ++
Sbjct: 104 IGLLDVFTPASSLRNFYD----FYLVMPFMQTD--LQKIMGME---FSEEKIQYLVYQML 154
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+K++H + HRD+KP NL + + LK+ D
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCE---------------------------LKILD 187
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG 238
FG A+ A + T +Y APEV L Y+++ DIWS+G IM +L G
Sbjct: 188 FGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 68
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 69 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KPENLL G +KL DFG A
Sbjct: 120 FCHSHRVLHRDLKPENLLINT---------------------------EGAIKLADFGLA 152
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 153 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 270 LHYDPNKRISAKAALAHPFF 289
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 58/293 (19%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQLAVGSHKHIVNIKDVYEN 80
E++G G G+V + + + Y +K V ++ KA REV+ LA H +IV+ ++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK-ALAKLDHVNIVHYNGCWDG 75
Query: 81 I--------YNGSR----CLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
N SR CL + ME G L Q I+++ + A + +I +
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGV 135
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H + + +RD+KP N+ D +K+ DFG L+ + DG
Sbjct: 136 DYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFG------LVTSLKNDG---------- 176
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL--CGFPPFFSNH 246
K +K +L+ Y++PE + Y K D+++LG+I+ LL C S
Sbjct: 177 --KRXRSKGTLR-------YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF 227
Query: 247 GQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
+ G+ + I FD ++ KTL++ +L P +R +++
Sbjct: 228 FTDLRDGIISDI----FD----------KKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 67
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 68 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KPENLL G +KL DFG A
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEG---------------------------AIKLADFGLA 151
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 269 LHYDPNKRISAKAALAHPFF 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 73
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 74 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 125 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 157
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 158 RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 218 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 274
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 275 LHYDPNKRISAKAALAHPFF 294
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 70/331 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKAR--REVELQLAVGSHKHIVNIKDV 77
+G G G V + A+K + H T R RE+++ L H++I+ I D+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-RHENIIGINDI 93
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
+ I++ + +L++ ++ + + + +I +K++H N+
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRGLKYIHSANVL 150
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
HRD+KP NLL D LK+ DFG + P GF + V+
Sbjct: 151 HRDLKPSNLLLNTTCD---LKICDFGLAR-----VADPDHDHT------GFLTEYVA--- 193
Query: 198 SLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIMYILLCGFPPFFSNH---------G 247
T +Y APE++ K Y KS DIWS+G I+ +L P F H G
Sbjct: 194 -------TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Query: 248 QAISPGM--------------------KNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCV 287
SP KN++ + FPN + +A L+ ML
Sbjct: 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL-FPNAD-----SKALDLLDKMLTF 300
Query: 288 DPSERLTIDQVMENKWISQFNQVPQTPLCTG 318
+P +R+ ++Q + + ++ Q+ P+
Sbjct: 301 NPHKRIEVEQALAHPYLEQYYDPSDEPIAEA 331
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLI---------------------------NTEGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 60/304 (19%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 9 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 68 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 157
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAIS 251
++ A+ T Y++PE L Y DIWS+G+ + + G P
Sbjct: 158 LIDEMAN--EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---------- 205
Query: 252 PGMKNRIRLGQFDF-------PNPEWEHV--SQEAKTLIKNMLCVDPSERLTIDQVMENK 302
R + F+ P P+ S E + + L +P+ER + Q+M +
Sbjct: 206 -----RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 260
Query: 303 WISQ 306
+I +
Sbjct: 261 FIKR 264
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 68 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 127 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 216
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
++ + A+ + T Y++PE L Y DIWS+G+ + + G P
Sbjct: 217 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 33 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 91
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 92 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 181
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ + A+ + T Y++PE L Y DIWS+G+ + + G P
Sbjct: 182 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 128/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q ++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KPENLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPENLLINT---------------------------EGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVL--HDTVKAR---REVELQLAVGSHKHIVN 73
I E+LG G G+ +++ ++T EV +K L D R +EV++ + H +++
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLK 71
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
V +Y R L I E + GG L + I + D + + +I S + +LH
Sbjct: 72 FIGV---LYKDKR-LNFITEYIKGGTL-RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
NI HRD+ N L + + + + DFG + T+P LK D +V
Sbjct: 127 MNIIHRDLNSHNCLVRENKN---VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 194 SNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIM 232
N PY++APE++ YD+ D++S G+++
Sbjct: 184 GN----------PYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEG---------------------------AIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 6 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 65 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ + A+ + T Y++PE L Y DIWS+G+ + + G P
Sbjct: 155 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 6 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 65 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ + A+ + T Y++PE L Y DIWS+G+ + + G P
Sbjct: 155 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 6 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 65 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ + A+ + T Y++PE L Y DIWS+G+ + + G P
Sbjct: 155 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 36/230 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ K + V A K++H +K R ++ +L V +
Sbjct: 6 DDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + K+ G E+ + + + +L
Sbjct: 65 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 154
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
++ + A+ + T Y++PE L Y DIWS+G+ + + G P
Sbjct: 155 LIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLI---------------------------NTEGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 73
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 74 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 125 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 157
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 158 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 218 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 274
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 275 LHYDPNKRISAKAALAHPFF 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 70
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 71 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 122 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 154
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 155 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 215 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 271
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 272 LHYDPNKRISAKAALAHPFF 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 70
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 71 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 122 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 154
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 155 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 215 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 271
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 272 LHYDPNKRISAKAALAHPFF 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 65
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 66 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 149
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 150 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 267 LHYDPNKRISAKAALAHPFF 286
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLI---------------------------NTEGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 65
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 66 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 117 FCHSHRVLHRDLKPQNLLI---------------------------NTEGAIKLADFGLA 149
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 267 LHYDPNKRISAKAALAHPFF 286
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 67
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 68 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEG---------------------------AIKLADFGLA 151
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 152 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 269 LHYDPNKRISAKAALAHPFF 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 69
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 70 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 153
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 271 LHYDPNKRISAKAALAHPFF 290
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA----RREVELQLAVG-----SHKHIV 72
+++G G G+V + + K +S + V T+KA ++ V+ G SH +I+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + + + +++I E M G L + +++K DG F+ + ++ I + +K+L
Sbjct: 110 RL----EGVISKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+ N HRD+ N+L NL + K++DFG ++ +
Sbjct: 165 NMNYVHRDLAARNILVN------------------SNL---------VCKVSDFGLSRVL 197
Query: 193 VSNKASLQTPCYTPY---YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFF--SNH 246
+ + T + APE + K+ + D+WS G++M+ ++ G P++ SNH
Sbjct: 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 257
Query: 247 G--QAISPGMK 255
+AI+ G +
Sbjct: 258 EVMKAINDGFR 268
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 65
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 66 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 149
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 150 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 267 LHYDPNKRISAKAALAHPFF 286
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 69
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 70 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 153
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 271 LHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 68
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 69 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 120 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 152
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 153 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 270 LHYDPNKRISAKAALAHPFF 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 68
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 69 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 120 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 152
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 153 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 213 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 269
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 270 LHYDPNKRISAKAALAHPFF 289
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
+D+ + I+G G G+V + T ++YA+K L +K ++ L L +V+
Sbjct: 189 NDFSVH-RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 74 IKDV-----YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
D ++ L I++ M+GG+L + Q G F+E + EI +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGL 305
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
+ +H++ + +RD+KP N+L + G ++++D G
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGL 338
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPF 242
A K T Y+APEVL YD S D +SLG +++ LL G PF
Sbjct: 339 ACDFSKKKP--HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
+D+ + I+G G G+V + T ++YA+K L +K ++ L L +V+
Sbjct: 189 NDFSVH-RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 74 IKDV-----YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
D ++ L I++ M+GG+L + Q G F+E + EI +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGL 305
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
+ +H++ + +RD+KP N+L + G ++++D G
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGL 338
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPF 242
A K T Y+APEVL YD S D +SLG +++ LL G PF
Sbjct: 339 ACDFSKKKP--HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
+D+ + I+G G G+V + T ++YA+K L +K ++ L L +V+
Sbjct: 189 NDFSVH-RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 74 IKDV-----YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
D ++ L I++ M+GG+L + Q G F+E + EI +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGL 305
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
+ +H++ + +RD+KP N+L + G ++++D G
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGL 338
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPF 242
A K T Y+APEVL YD S D +SLG +++ LL G PF
Sbjct: 339 ACDFSKKKP--HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVL-HDTVKARREVELQLAVGSHKHIVN 73
+D+ + I+G G G+V + T ++YA+K L +K ++ L L +V+
Sbjct: 188 NDFSVH-RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 74 IKDV-----YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
D ++ L I++ M+GG+L + Q G F+E + EI +
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGL 304
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
+ +H++ + +RD+KP N+L + G ++++D G
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGL 337
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPF 242
A K T Y+APEVL YD S D +SLG +++ LL G PF
Sbjct: 338 ACDFSKKKP--HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 141/340 (41%), Gaps = 75/340 (22%)
Query: 17 YDISTEILGLGINGKVLQIVEKKTSEVY-ALKVLHDTVKARREVELQLAVGSHKHIVNIK 75
Y+I + LG G GKV++ ++ K + A+K++ + + ++ V H + +
Sbjct: 16 YEI-VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPN 74
Query: 76 DVYENI-------YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI--IMNEICS 126
+ + ++G C ++ E + G + I KE+G R I + +IC
Sbjct: 75 STFRCVQMLEWFEHHGHIC--IVFELL-GLSTYDFI--KENGFLPFRLDHIRKMAYQICK 129
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGD-----VKPENLLYTKPGDGGIL 181
++ FLH + H D+KPEN+L+ + +D+ + +K + P +
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQ---------SDYTEAYNPKIKRDERTLINPD----I 176
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
K+ DFG A + ++L +Y APEV+ + + CD+WS+G I+ GF
Sbjct: 177 KVVDFGSATYDDEHHSTL---VXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF-T 232
Query: 242 FFSNHGQAISPGMKNRI-------------RLGQFDFPNPEWE-------HVSQEAK--- 278
F H M RI + F +W+ +VS+ K
Sbjct: 233 VFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK 292
Query: 279 --------------TLIKNMLCVDPSERLTIDQVMENKWI 304
LI+ ML DP++R+T+ + +++ +
Sbjct: 293 EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEG---------------------------AIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 65
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 66 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 149
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 267 LHYDPNKRISAKAALAHPFF 286
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 67
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 68 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEG---------------------------AIKLADFGLA 151
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 269 LHYDPNKRISAKAALAHPFF 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 67
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 68 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEG---------------------------AIKLADFGLA 151
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 152 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 212 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 268
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 269 LHYDPNKRISAKAALAHPFF 288
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 39/229 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQL---AVGSHKHIVNIKDVYEN 80
+G G G V ++V K + ++ A+K + TV + + +L + V I Y
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 81 IYNGSRCLLVIMECMHGG--ELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ-NIA 137
++ C + ME M + ++ + D E I A+ L + I
Sbjct: 90 LFREGDCW-ICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
HRD+KP N+L + G+ +KL DFG + ++V + A
Sbjct: 149 HRDIKPSNILLDRSGN---------------------------IKLCDFGISGQLVDSIA 181
Query: 198 SLQTPCYTPYYVAPEVLGPDK----YDKSCDIWSLGVIMYILLCGFPPF 242
+ P Y+APE + P YD D+WSLG+ +Y L G P+
Sbjct: 182 KTRDAGCRP-YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYAL-KVLHDT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV AL K+ DT A RE+ L L +H +IV
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 66
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 67 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 118 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 150
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 211 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 267
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 268 LHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYAL-KVLHDT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV AL K+ DT A RE+ L L +H +IV
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 65
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q +++ D A T +I + ++ +
Sbjct: 66 LLDV---IHTENKLYLV-FEFLH-----QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 117 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 149
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 210 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 266
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 267 LHYDPNKRISAKAALAHPFF 286
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 54/234 (23%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAVGSHKHI 71
+S +G G G V ++K++ E A+K L +A RE+ L L H+++
Sbjct: 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL-LLLKHMQHENV 85
Query: 72 VNIKDVY------ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+ + DV+ N Y+ ++M M +Q+ F+E + ++ ++
Sbjct: 86 IGLLDVFTPASSLRNFYD----FYLVMPFMQTD-----LQKIMGLKFSEEKIQYLVYQML 136
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+K++H + HRD+KP NL + + LK+ D
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCE---------------------------LKILD 169
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG 238
FG A+ A + T +Y APEV L Y+++ DIWS+G IM +L G
Sbjct: 170 FGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 128/320 (40%), Gaps = 76/320 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 69
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG-AFTEREAAII---MNEICSAIK 129
+ DV I+ ++ LV E +H Q ++ D A T +I + ++ +
Sbjct: 70 LLDV---IHTENKLYLV-FEFLH-----QDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
F H + HRD+KP+NLL G +KL DFG A
Sbjct: 121 FCHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLA 153
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP----- 240
+ + T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 241 ----PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNM 284
F G + + PG+ + + + P+W + ++ ++L+ M
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM 270
Query: 285 LCVDPSERLTIDQVMENKWI 304
L DP++R++ + + +
Sbjct: 271 LHYDPNKRISAKAALAHPFF 290
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 49/237 (20%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALK-VLHDTVKARREVELQ--LAVGSHKHIVNIKDVY 78
+ G G G V EK T A+K V+ D RE+++ LAV H +IV ++ +
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYF 88
Query: 79 ENIYNGSR---CLLVIMECMHGGELFQRIQQKEDGAFTEREAA-------IIMNEICSAI 128
+ R L V+ME + + R + + R+ A + + ++ +I
Sbjct: 89 YTLGERDRRDIYLNVVME--YVPDTLHRCCRN----YYRRQVAPPPILIKVFLFQLIRSI 142
Query: 129 KFLH--DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
LH N+ HRD+KP N+L + DG LKL DF
Sbjct: 143 GCLHLPSVNVCHRDIKPHNVLVNE-ADG-------------------------TLKLCDF 176
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
G AKK+ ++ ++ C + YY APE + G Y + DIWS+G I ++ G P F
Sbjct: 177 GSAKKLSPSEPNVAYIC-SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 74/319 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 65
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKF 130
+ DV I+ ++ LV + F + A T +I + ++ + F
Sbjct: 66 LLDV---IHTENKLYLVFEHVHQDLKTFM-----DASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KP+NLL G +KL DFG A+
Sbjct: 118 CHSHRVLHRDLKPQNLLI---------------------------NTEGAIKLADFGLAR 150
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP------ 240
+ T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 151 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210
Query: 241 ---PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNML 285
F G + + PG+ + + + P+W + ++ ++L+ ML
Sbjct: 211 QLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 286 CVDPSERLTIDQVMENKWI 304
DP++R++ + + +
Sbjct: 268 HYDPNKRISAKAALAHPFF 286
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 131/326 (40%), Gaps = 72/326 (22%)
Query: 14 QDDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK--ARREVELQLAVGSHKHI 71
QDDY + + LG G +V + + +E +K+L K +RE+++ + +I
Sbjct: 36 QDDYQLVRK-LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNI 94
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+ + D+ ++ SR ++ E ++ + Q Q T+ + M EI A+ +
Sbjct: 95 ITLADIVKD--PVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYC 147
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
H I HRDVKP N++ + L+L D+G + + PG +++
Sbjct: 148 HSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA------- 193
Query: 192 IVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ-- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 -------------SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 240
Query: 249 -----------------------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAK 278
+ P G +R R + F + E +H VS EA
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEAL 298
Query: 279 TLIKNMLCVDPSERLTIDQVMENKWI 304
+ +L D RLT + ME+ +
Sbjct: 299 DFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDT----VKARREVELQLAVGSHKHIVNIKDVYE 79
+G G G+V ++ +KT V A+K + + R ++L + + SH ++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 80 NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN-IAH 138
I N + + ME M G ++++++ G ER + I A+ +L +++ + H
Sbjct: 93 FITNTD--VFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148
Query: 139 RDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKAS 198
RDVKP N+L + G +KL DFG + ++V +KA
Sbjct: 149 RDVKPSNILLDERGQ---------------------------IKLCDFGISGRLVDDKAK 181
Query: 199 LQTPCYTPYYVAPEVLGP-----DKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
++ Y+APE + P YD D+WSLG+ + L G P+ +
Sbjct: 182 DRS-AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY-----KNCKTD 235
Query: 254 MKNRIRLGQFDFP-NPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQV 310
+ ++ Q + P P S + ++ +K+ L D +R ++++E+ +I ++ +
Sbjct: 236 FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETL 293
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 131/300 (43%), Gaps = 43/300 (14%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREV---ELQLAVGSHKHIVNIKDVYE 79
+LG G G+V++ S YA+K + T + + + LA +H+++V +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 80 NIYNGSR---------CLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
N + L + ME L+ I E+ E + +I A+ +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSY 131
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
+H Q I HRD+KP N+ + + +K+ DFG K + ILKL ++
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVH------RSLDILKLD----SQ 178
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQA 249
+ + +L + T YVA EVL G Y++ D++SLG+I + ++ F
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPF---------- 228
Query: 250 ISPGMKN-----RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
S GM+ ++R +FP ++ + K +I+ ++ DP++R ++ + W+
Sbjct: 229 -STGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%), Gaps = 56/258 (21%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVY-ALKVLHD--TVKARREVELQLAVGS---HKHI 71
+++G G G+V L++ K+ E++ A+K L T K RR+ + ++ H ++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+++ E + S +++I E M G L ++Q DG FT + ++ I + +K+L
Sbjct: 97 IHL----EGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYL 151
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
D N HRD+ N+L NL + K++DFG ++
Sbjct: 152 ADMNYVHRDLAARNILVNS------------------NL---------VCKVSDFGLSRF 184
Query: 192 IVSNKASLQTPCYTPY--------YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
+ + + P YT + APE + K+ + D+WS G++M+ ++ G P+
Sbjct: 185 LEDDTSD---PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 241
Query: 243 FSNHGQAISPGMKNRIRL 260
+ Q + ++ RL
Sbjct: 242 WDMTNQDVINAIEQDYRL 259
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARHT 175
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
A T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 176 DDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA--RREVELQLAVGSHKHIV 72
DD++ +E LG G G V ++ + + + A K++H +K R ++ +L V +
Sbjct: 16 DDFERISE-LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP 74
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
I Y Y+ + + ME M GG L Q + KE E + + + +L
Sbjct: 75 YIVGFYGAFYSDGE-ISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 133 DQN-IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
+++ I HRDVKP N+L G+ +KL DFG + +
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGE---------------------------IKLCDFGVSGQ 164
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
++ + A+ + T Y+APE L Y DIWS+G+ + L G P
Sbjct: 165 LIDSMAN--SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 86 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 138
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 139 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARHT 171
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
A T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 172 DDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 226
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN-VFIGANPLAVDLLEKML 285
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARHT 175
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
A T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 176 DDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 38/226 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSH------KHIVNIK 75
+++G G G+V++ + K + ALK++ + + R+ ++ + H + +N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 76 DVYENI-YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ EN + C+ + M+ L++ I++ + F+ + I + LH
Sbjct: 163 HMLENFTFRNHICMTFELLSMN---LYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I H D+KPEN+L + G GI K+ DFG +
Sbjct: 220 RIIH------------------------CDLKPENILLKQQGRSGI-KVIDFGSS---CY 251
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
+ T + +Y APEV+ +Y D+WSLG I+ LL G+P
Sbjct: 252 EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 38/226 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSH------KHIVNIK 75
+++G G G+V++ + K + ALK++ + + R+ ++ + H + +N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 76 DVYENI-YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ EN + C+ + M+ L++ I++ + F+ + I + LH
Sbjct: 163 HMLENFTFRNHICMTFELLSMN---LYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I H D+KPEN+L + G GI K+ DFG +
Sbjct: 220 RIIH------------------------CDLKPENILLKQQGRSGI-KVIDFGSS---CY 251
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
+ T + +Y APEV+ +Y D+WSLG I+ LL G+P
Sbjct: 252 EHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 58/259 (22%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIV 72
E++G G G+V L+ KK S V A+K L T + RRE + ++ H +I+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGEL--FQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
++ V N S ++++ E M G L F R+ DG FT + ++ I S +++
Sbjct: 79 RLEGVVTN----SMPVMILTEFMENGALDSFLRLN---DGQFTVIQLVGMLRGIASGMRY 131
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
L + + HRD+ N+L NL + K++DFG ++
Sbjct: 132 LAEMSYVHRDLAARNILVNS------------------NL---------VCKVSDFGLSR 164
Query: 191 KIVSNKASLQTPCYTP--------YYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
+ N + P YT + APE + K+ + D WS G++M+ ++ G P
Sbjct: 165 FLEENSSD---PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
Query: 242 FFSNHGQAISPGMKNRIRL 260
++ Q + ++ RL
Sbjct: 222 YWDMSNQDVINAIEQDYRL 240
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
+M ++ + FLH + HRD+KP+N+L T G
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ-------------------------- 158
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIM 232
+KL DFG A +I S + +L + T +Y APEVL Y D+WS+G I
Sbjct: 159 -IKLADFGLA-RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIF 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 28/123 (22%)
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
+M ++ + FLH + HRD+KP+N+L T G
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ-------------------------- 158
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
+KL DFG A +I S + +L + T +Y APEVL Y D+WS+G I +
Sbjct: 159 -IKLADFGLA-RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
Query: 240 PPF 242
P F
Sbjct: 217 PLF 219
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 99/233 (42%), Gaps = 46/233 (19%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALK-VLHDTVK-----ARREVELQLAVGSHKHIVNIK 75
E LG G V + + K T ALK V D+ + A RE+ L + H++IV +
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KHENIVRLY 69
Query: 76 DVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEICSAIKF 130
DV I+ ++ LV E M +L + + + G T R + ++ + F
Sbjct: 70 DV---IHTENKLTLVF-EFM-DNDLKKYMDSRTVGN-TPRGLELNLVKYFQWQLLQGLAF 123
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H+ I HRD+KP+NLL K G LKL DFG A+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQ---------------------------LKLGDFGLAR 156
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+ + T +Y AP+VL G Y S DIWS G I+ ++ G P F
Sbjct: 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 28/123 (22%)
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
+M ++ + FLH + HRD+KP+N+L T G
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ-------------------------- 158
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
+KL DFG A +I S + +L + T +Y APEVL Y D+WS+G I +
Sbjct: 159 -IKLADFGLA-RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
Query: 240 PPF 242
P F
Sbjct: 217 PLF 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 124/319 (38%), Gaps = 74/319 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 69
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKF 130
+ DV I+ ++ LV + F + A T +I + ++ + F
Sbjct: 70 LLDV---IHTENKLYLVFEFLSMDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KPENLL G +KL DFG A+
Sbjct: 122 CHSHRVLHRDLKPENLLINT---------------------------EGAIKLADFGLAR 154
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP------ 240
+ T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ---PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNML 285
F G + + PG+ + + + P+W + ++ ++L+ ML
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 286 CVDPSERLTIDQVMENKWI 304
DP++R++ + + +
Sbjct: 272 HYDPNKRISAKAALAHPFF 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 124/319 (38%), Gaps = 74/319 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 67
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKF 130
+ DV I+ ++ LV + F + A T +I + ++ + F
Sbjct: 68 LLDV---IHTENKLYLVFEFLSMDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KPENLL G +KL DFG A+
Sbjct: 120 CHSHRVLHRDLKPENLLINTEG---------------------------AIKLADFGLAR 152
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP------ 240
+ T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 153 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 212
Query: 241 ---PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNML 285
F G + + PG+ + + + P+W + ++ ++L+ ML
Sbjct: 213 QLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 269
Query: 286 CVDPSERLTIDQVMENKWI 304
DP++R++ + + +
Sbjct: 270 HYDPNKRISAKAALAHPFF 288
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 56/289 (19%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E++G G G V + + + +V ++ ++ + VEL QL+ +H +IV + N
Sbjct: 14 EVVGRGAFGVVCK-AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS-AIKFLHD---QNI 136
CL +ME GG L+ + E + A+ CS + +LH + +
Sbjct: 73 ----PVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI---- 192
HRD+KP NLL G +LK+ DFG A I
Sbjct: 127 IHRDLKPPNLLLV--------------------------AGGTVLKICDFGTACDIQTHM 160
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
+NK S ++APEV Y + CD++S G+I++ ++ PF G A
Sbjct: 161 TNNKGSAA-------WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-- 211
Query: 253 GMKNRIRLGQFDFPNPEW-EHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
RI + P +++ + ++L+ DPS+R +++++++
Sbjct: 212 ----RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 74/319 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 69
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKF 130
+ DV I+ ++ LV + F + A T +I + ++ + F
Sbjct: 70 LLDV---IHTENKLYLVFEHVDQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KP+NLL G +KL DFG A+
Sbjct: 122 CHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLAR 154
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP------ 240
+ T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ---PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNML 285
F G + + PG+ + + + P+W + ++ ++L+ ML
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 286 CVDPSERLTIDQVMENKWI 304
DP++R++ + + +
Sbjct: 272 HYDPNKRISAKAALAHPFF 290
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 56/289 (19%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL-QLAVGSHKHIVNIKDVYEN 80
E++G G G V + + + +V ++ ++ + VEL QL+ +H +IV + N
Sbjct: 15 EVVGRGAFGVVCK-AKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS-AIKFLHD---QNI 136
CL +ME GG L+ + E + A+ CS + +LH + +
Sbjct: 74 ----PVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI---- 192
HRD+KP NLL G +LK+ DFG A I
Sbjct: 128 IHRDLKPPNLLLV--------------------------AGGTVLKICDFGTACDIQTHM 161
Query: 193 VSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
+NK S ++APEV Y + CD++S G+I++ ++ PF G A
Sbjct: 162 TNNKGSAA-------WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-- 212
Query: 253 GMKNRIRLGQFDFPNPEW-EHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
RI + P +++ + ++L+ DPS+R +++++++
Sbjct: 213 ----RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDXE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 45/212 (21%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 94
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIM----NEICSAIKFLHDQNIAHRDVKPENLL 147
ME + G L +Q A ER I + ++IC +++L + HRD+ N+L
Sbjct: 95 MEYLPYGSLRDYLQ-----AHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL 149
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYT 205
V+ EN + K+ DFG K + +K ++ P +
Sbjct: 150 -----------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 206 P-YYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
P ++ APE L K+ + D+WS GV++Y L
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 44/303 (14%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVNIKDV 77
+S +ILG G +G V+ + V ++L D A E++L H +++
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIR---- 73
Query: 78 YENIYNGSRCLLVIMEC--MHGGELFQRIQQKEDGAFTEREAAII--MNEICSAIKFLHD 133
Y R L + +E ++ +L + ++ ++E I + +I S + LH
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HRD+KP+N+L + + T ENL + ++DFG KK+
Sbjct: 134 LKIIHRDLKPQNILVSTSS-----RFTADQQTGAENLR---------ILISDFGLCKKLD 179
Query: 194 SNKASLQT----PCYTPYYVAPEVLGPD-------KYDKSCDIWSLGVIMYILLC-GFPP 241
S ++S +T P T + APE+L + +S DI+S+G + Y +L G P
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQV 298
F + + N IR G F + H + EA LI M+ DP +R T +V
Sbjct: 240 FGDKYSRE-----SNIIR-GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
Query: 299 MEN 301
+ +
Sbjct: 294 LRH 296
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 110 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 162
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 163 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 194
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 195 --TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 250
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 309
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 310 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 135/324 (41%), Gaps = 68/324 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTV-------KARREVELQLAVGSHKHIVNIKD 76
+G G G V V+ +T A+K L+ +A RE+ L L H++++ + D
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL-LKHMRHENVIGLLD 91
Query: 77 VY--ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
V+ + + ++M M G +L + ++ ++ G E ++ ++ ++++H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLG---EDRIQFLVYQMLKGLRYIHAA 147
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KP NL + + LK+ DFG A++ S
Sbjct: 148 GIIHRDLKPGNLAVNEDCE---------------------------LKILDFGLARQADS 180
Query: 195 NKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCGFPPF-FSNHGQAI-- 250
+ T +Y APEV L +Y ++ DIWS+G IM ++ G F S+H +
Sbjct: 181 E---MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 237
Query: 251 ------SPGMKNRIRLGQFDFPN-----PEWE---------HVSQEAKTLIKNMLCVDPS 290
+P + RL + N PE E + S A L++ ML +D
Sbjct: 238 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE 297
Query: 291 ERLTIDQVMENKWISQFNQVPQTP 314
+R+T + + + + + P
Sbjct: 298 QRVTAGEALAHPYFESLHDTEDEP 321
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 94
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L + +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 95 MEFLPYGSLREYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 149
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 150 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 92 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 144
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 145 SADIIHRDLKPSNLAVNEDSE---------------------------LKILDFGLARH- 176
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 232
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 291
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 96 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 148
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 149 SADIIHRDLKPSNLAVNEDSE---------------------------LKILDFGLARH- 180
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 236
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 295
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 46/225 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-VLHDT------VKARREVELQLAVGSHKHIVNIKD 76
+G G G+V + +KT + ALK VL + + A RE+++ L + H+++VN+ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI-LQLLKHENVVNLIE 84
Query: 77 VYE---NIYNGSRC----LLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+ + YN RC LV C H L + K FT E +M + + +
Sbjct: 85 ICRTKASPYN--RCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGL 138
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H I HRD+K N+L T+ G+LKL DFG + F
Sbjct: 139 YYIHRNKILHRDMKAANVLITR---DGVLKLADFGLARA------------------FSL 177
Query: 189 AKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIM 232
AK N+ T +Y PE +LG Y D+W G IM
Sbjct: 178 AKNSQPNR--YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL---HDTV----KARREVELQLAVGSHKHIVNIKD 76
LG G G+V + ++ T+E A+K + H+ A REV L L H++I+ +K
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSL-LKELQHRNIIELKS 100
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V I++ R L+ + +L + + + D + R + ++ + + F H +
Sbjct: 101 V---IHHNHRLHLIFEYAEN--DLKKYMDKNPDVSM--RVIKSFLYQLINGVNFCHSRRC 153
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+KP+NLL L ++D + +LK+ DFG A+
Sbjct: 154 LHRDLKPQNLL---------LSVSDASETP-------------VLKIGDFGLARAFGIPI 191
Query: 197 ASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
T +Y PE+L G Y S DIWS+ I +L P F
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 109 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 161
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 162 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 193
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 194 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 249
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 308
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 309 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 110 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 162
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 163 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 194
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 195 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 250
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 309
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 310 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 100 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 152
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 153 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 184
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 185 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 240
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 241 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 299
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 300 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 330
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 86 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 138
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 139 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 170
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 171 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 226
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN-VFIGANPLAVDLLEKML 285
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 97 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 149
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 150 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARHT 182
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 183 ADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 237
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 296
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 95 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 147
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 148 SADIIHRDLKPSNLAVNEDXE---------------------------LKILDFGLARH- 179
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 235
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 294
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 38/226 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSH------KHIVNIK 75
+++G G G+V++ + K + ALK++ + + R+ ++ + H + +N+
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 76 DVYENI-YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ EN + C+ + M+ L++ I++ + F+ + I + LH
Sbjct: 163 HMLENFTFRNHICMTFELLSMN---LYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I H D+KPEN+L + G GI K+ DFG +
Sbjct: 220 RIIH------------------------CDLKPENILLKQQGRSGI-KVIDFGSS---CY 251
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFP 240
+ + +Y APEV+ +Y D+WSLG I+ LL G+P
Sbjct: 252 EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 97 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 149
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 150 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARHT 182
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 183 ADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 237
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 296
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 97 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 149
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 150 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARHT 182
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 183 ADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 237
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 296
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 40/299 (13%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVNIKDV 77
+S +ILG G +G V+ + V ++L D A E++L H +++
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIR---- 91
Query: 78 YENIYNGSRCLLVIMEC--MHGGELFQRIQQKEDGAFTEREAAII--MNEICSAIKFLHD 133
Y R L + +E ++ +L + ++ ++E I + +I S + LH
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HRD+KP+N+L + + T ENL + ++DFG KK+
Sbjct: 152 LKIIHRDLKPQNILVSTSS-----RFTADQQTGAENLR---------ILISDFGLCKKLD 197
Query: 194 SN----KASLQTPCYTPYYVAPEVLGPD---KYDKSCDIWSLG-VIMYILLCGFPPFFSN 245
S + +L P T + APE+L + +S DI+S+G V YIL G PF
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
+ + N IR G F + H + EA LI M+ DP +R T +V+ +
Sbjct: 258 YSRE-----SNIIR-GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 41 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 98
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 99 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 153
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 154 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 101 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 153
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 154 SADIIHRDLKPSNLAVNEDXE---------------------------LKILDFGLARH- 185
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 186 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 241
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 300
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 301 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 331
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 65 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 122
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 123 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 177
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 178 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 91
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 92 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 146
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 147 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 37 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 94
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 95 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 149
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 150 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 40/299 (13%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVNIKDV 77
+S +ILG G +G V+ + V ++L D A E++L H +++
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIR---- 91
Query: 78 YENIYNGSRCLLVIMEC--MHGGELFQRIQQKEDGAFTEREAAII--MNEICSAIKFLHD 133
Y R L + +E ++ +L + ++ ++E I + +I S + LH
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HRD+KP+N+L + + T ENL + ++DFG KK+
Sbjct: 152 LKIIHRDLKPQNILVSTSS-----RFTADQQTGAENLR---------ILISDFGLCKKLD 197
Query: 194 SN----KASLQTPCYTPYYVAPEVLGPD---KYDKSCDIWSLG-VIMYILLCGFPPFFSN 245
S + +L P T + APE+L + +S DI+S+G V YIL G PF
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQVMEN 301
+ + N IR G F + H + EA LI M+ DP +R T +V+ +
Sbjct: 258 YSRE-----SNIIR-GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 96 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 148
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 149 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 180
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 236
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 295
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG +
Sbjct: 143 SADIIHRDLKPSNLAVNEDSE---------------------------LKILDFGLCRH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 46/225 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-VLHDT------VKARREVELQLAVGSHKHIVNIKD 76
+G G G+V + +KT + ALK VL + + A RE+++ L + H+++VN+ +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI-LQLLKHENVVNLIE 83
Query: 77 VYE---NIYNGSRC----LLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+ + YN RC LV C H L + K FT E +M + + +
Sbjct: 84 ICRTKASPYN--RCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGL 137
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H I HRD+K N+L T+ G+LKL DFG + F
Sbjct: 138 YYIHRNKILHRDMKAANVLITR---DGVLKLADFGLARA------------------FSL 176
Query: 189 AKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIM 232
AK N+ T +Y PE +LG Y D+W G IM
Sbjct: 177 AKNSQPNR--YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 46/225 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-VLHDT------VKARREVELQLAVGSHKHIVNIKD 76
+G G G+V + +KT + ALK VL + + A RE+++ L + H+++VN+ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI-LQLLKHENVVNLIE 84
Query: 77 VYE---NIYNGSRC----LLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+ + YN RC LV C H L + K FT E +M + + +
Sbjct: 85 ICRTKASPYN--RCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGL 138
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H I HRD+K N+L T+ G+LKL DFG + F
Sbjct: 139 YYIHRNKILHRDMKAANVLITR---DGVLKLADFGLARA------------------FSL 177
Query: 189 AKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIM 232
AK N+ T +Y PE +LG Y D+W G IM
Sbjct: 178 AKNSQPNR--YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 39 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 96
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 97 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 151
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 152 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 74/319 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 69
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKF 130
+ DV I+ ++ LV + F + A T +I + ++ + F
Sbjct: 70 LLDV---IHTENKLYLVFEFLSMDLKDFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KP+NLL G +KL DFG A+
Sbjct: 122 CHSHRVLHRDLKPQNLLINT---------------------------EGAIKLADFGLAR 154
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP------ 240
+ T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 155 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 241 ---PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNML 285
F G + + PG+ + + + P+W + ++ ++L+ ML
Sbjct: 215 QLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 286 CVDPSERLTIDQVMENKWI 304
DP++R++ + + +
Sbjct: 272 HYDPNKRISAKAALAHPFF 290
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 52 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 109
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 110 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 164
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 165 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 52 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 109
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 110 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 164
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 165 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 46/225 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALK-VLHDT------VKARREVELQLAVGSHKHIVNIKD 76
+G G G+V + +KT + ALK VL + + A RE+++ L + H+++VN+ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKI-LQLLKHENVVNLIE 84
Query: 77 VYE---NIYNGSRC----LLVIMECMHG-GELFQRIQQKEDGAFTEREAAIIMNEICSAI 128
+ + YN RC LV C H L + K FT E +M + + +
Sbjct: 85 ICRTKASPYN--RCKASIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGL 138
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H I HRD+K N+L T+ G+LKL DFG + F
Sbjct: 139 YYIHRNKILHRDMKAANVLITR---DGVLKLADFGLARA------------------FSL 177
Query: 189 AKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIM 232
AK N+ T +Y PE +LG Y D+W G IM
Sbjct: 178 AKNSQPNR--YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 16 DYDISTEI--------LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS 67
DY+ E+ LG G G+V ++ +K+T A+K + ++ R EL G
Sbjct: 85 DYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR--LEVFRAEELMACAGL 142
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
I +Y + G + + ME + GG L Q + KE G E A + +
Sbjct: 143 TS--PRIVPLYGAVREGP-WVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEG 197
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+++LH + I H DVK +N+L + DG L DFG + L G
Sbjct: 198 LEYLHSRRILHGDVKADNVLLSS--DGSHAALCDFGHA---------------VCLQPDG 240
Query: 188 FAKKIVSNKASLQTPCYTP---YYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
K +++ Y P ++APEV+ D D+WS +M +L G P+
Sbjct: 241 LGKSLLTGD-------YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 95 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 147
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 148 SADIIHRDLKPSNLAVNEDXE---------------------------LKILDFGLARH- 179
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 235
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 294
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 91
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 92 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 146
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA--SLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 147 -------------VENENRV----------KIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 34 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 91
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 92 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 146
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 147 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 40 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 97
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 98 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 152
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 153 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 32 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 89
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 90 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 144
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 145 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + IL DGG+ + TD +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKIL-------------------DGGLARHTDDEMTGYV 183
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 184 A-----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 38 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 95
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 96 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 150
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 151 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 33 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 90
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HRD+ N+L
Sbjct: 91 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNIL---- 145
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 146 -------------VENENRV----------KIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 102 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 154
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 155 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 186
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 187 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 242
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 301
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 302 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 332
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 109 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 161
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 162 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 193
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 194 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 249
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 250 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 308
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 309 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 74/319 (23%)
Query: 21 TEILGLGINGKVLQIVEKKTSEVYALKVLH-DT------VKARREVELQLAVGSHKHIVN 73
E +G G G V + K T EV ALK + DT A RE+ L L +H +IV
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-LKELNHPNIVK 68
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII---MNEICSAIKF 130
+ DV I+ ++ LV + F + A T +I + ++ + F
Sbjct: 69 LLDV---IHTENKLYLVFEFLSMDLKDFM-----DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
H + HRD+KP+NLL G +KL DFG A+
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEG---------------------------AIKLADFGLAR 153
Query: 191 KIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVI---MYILLCGFP------ 240
+ T +Y APE+L G Y + DIWSLG I M FP
Sbjct: 154 AFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 213
Query: 241 ---PFFSNHG---QAISPGMKNRIRLGQFDFPNPEWEH---------VSQEAKTLIKNML 285
F G + + PG+ + + + P+W + ++ ++L+ ML
Sbjct: 214 QLFRIFRTLGTPDEVVWPGVTS---MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 270
Query: 286 CVDPSERLTIDQVMENKWI 304
DP++R++ + + +
Sbjct: 271 HYDPNKRISAKAALAHPFF 289
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ + T+ ++ +I +K++H
Sbjct: 86 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIYQILRGLKYIH 138
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 139 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 170
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 171 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 226
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFAN-VFIGANPLAVDLLEKML 285
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 110 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 162
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 163 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 194
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 195 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 250
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 251 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 309
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 310 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 92 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 144
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 145 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 176
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 232
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 291
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 92 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 144
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 145 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 176
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 232
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 291
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 101 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 153
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 154 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 185
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 186 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 241
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 242 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 300
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 301 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 331
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 102 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 154
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 155 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 186
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 187 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 242
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 301
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 302 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 332
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 102 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 154
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 155 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 186
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 187 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 242
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 243 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 301
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 302 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 332
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 96 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 148
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 149 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 180
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 236
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 295
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 87 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 140 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 171
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 172 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 227
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 286
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 287 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 317
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 113 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 165
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 166 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 197
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 198 --TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 253
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 312
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 313 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 343
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 88 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 140
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 141 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 172
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 173 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 228
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 229 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKML 287
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 288 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 318
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 16 DYDISTEI--------LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS 67
DY+ E+ LG G G+V ++ +K+T A+K + ++ R EL G
Sbjct: 66 DYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVR--LEVFRAEELMACAGL 123
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
I +Y + G + + ME + GG L Q + KE G E A + +
Sbjct: 124 TS--PRIVPLYGAVREGP-WVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEG 178
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+++LH + I H DVK +N+L + DG L DFG + L G
Sbjct: 179 LEYLHSRRILHGDVKADNVLLSS--DGSHAALCDFGHA---------------VCLQPDG 221
Query: 188 FAKKIVSNKASLQTPCYTP---YYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
K +++ Y P ++APEV+ D D+WS +M +L G P+
Sbjct: 222 LGKDLLTGD-------YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 52/243 (21%)
Query: 16 DYDISTEI--------LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREV----ELQL 63
DY+ E+ LG G G+V ++ +K+T A+K K R EV EL
Sbjct: 64 DYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVA 117
Query: 64 AVG-SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
G S IV + Y + G + + ME + GG L Q I+Q G E A +
Sbjct: 118 CAGLSSPRIVPL---YGAVREGPW-VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLG 171
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+ +++LH + I H DVK +N+L + DG L DFG L
Sbjct: 172 QALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDFGHA---------------LC 214
Query: 183 LTDFGFAKKIVSNKASLQTPCYTP---YYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
L G K SL T Y P ++APEV+ D DIWS +M +L G
Sbjct: 215 LQPDGLGK-------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 267
Query: 240 PPF 242
P+
Sbjct: 268 HPW 270
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 92 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 144
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 145 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 176
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 232
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 233 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 291
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 292 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 322
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 95 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 147
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 148 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 179
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 235
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 294
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 95 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 147
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 148 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 179
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 235
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 236 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 294
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 295 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 325
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 89 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 141
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 142 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 173
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 174 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 229
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 230 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 288
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 289 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 319
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 113 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 165
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 166 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 197
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 198 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 253
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 254 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 312
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 313 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 343
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 86 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 138
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 139 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 170
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 171 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 226
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKML 285
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 316
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 87 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 139
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 140 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 171
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 172 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 227
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 228 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 286
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 287 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 97 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 149
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 150 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 181
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 182 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 237
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 238 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 296
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 297 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 327
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 16/222 (7%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQ------LAVGSHKHIVNIKDV 77
+G G G+VL + YA+KV+ + K R +++ + + +K
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
+ +Y CL I E + G L++ I + F + + EI A+ +L ++
Sbjct: 103 GKFMYYDHMCL--IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLT 159
Query: 138 HRDVKPENLLYTKP-GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
H D+KPEN+L P + ++ + D K + TK +KL DFG A
Sbjct: 160 HTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG---IKLIDFGCATFKSDYH 216
Query: 197 ASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCG 238
S+ T Y APEV+ +D S D+WS G ++ L G
Sbjct: 217 GSIIN---TRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 96 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 148
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DFG A+
Sbjct: 149 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFGLARH- 180
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 236
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 237 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 295
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 296 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 326
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 52/208 (25%)
Query: 120 IMNEICSAIKFLHDQ-NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
I+ + ++ ++H++ NI HRDVKP N+L K G +KL+DFG+
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDK---NGRVKLSDFGE-------------- 198
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPD-KYDKS-CDIWSLGVIMYILL 236
+++ KKI ++ + + ++ PE + Y+ + DIWSLG+ +Y++
Sbjct: 199 -----SEYMVDKKIKGSRGTYE-------FMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
Query: 237 CGFPPFFSNHGQAIS-PGMKNRIRLGQFDFP---------------NPEWEHVSQEAKTL 280
PF IS + N IR ++P +S E
Sbjct: 247 YNVVPF----SLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDF 302
Query: 281 IKNMLCVDPSERLTIDQVMENKWISQFN 308
+K L +P+ER+T + ++++W++ N
Sbjct: 303 LKLFLRKNPAERITSEDALKHEWLADTN 330
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 22 EILGLGINGKVLQ---IVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIVN 73
+++G+G G+V V K A+K L T K RR+ + ++ H +I++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+ E + + +++I E M G L +K DG FT + ++ I S +K+L D
Sbjct: 95 L----EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 149
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGGILKLTDFGF 188
+ HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 150 MSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTR---GGKIPIR---- 199
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHG 247
+ APE + K+ + D+WS G++M+ ++ G P++
Sbjct: 200 -------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
Query: 248 QAISPGMKNRIRL 260
Q + ++ RL
Sbjct: 241 QDVIKAIEEGYRL 253
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 56/258 (21%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVY-ALKVLHD--TVKARREVELQLAVGS---HKHI 71
+++G G G+V L++ K+ E++ A+K L T K RR+ + ++ H ++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFL 131
+++ E + S +++I E M G L ++Q DG FT + ++ I + +K+L
Sbjct: 71 IHL----EGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYL 125
Query: 132 HDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
D N HR + N+L NL + K++DFG ++
Sbjct: 126 ADMNYVHRALAARNILVN------------------SNL---------VCKVSDFGLSRF 158
Query: 192 IVSNKASLQTPCYTPY--------YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
+ + + P YT + APE + K+ + D+WS G++M+ ++ G P+
Sbjct: 159 LEDDTSD---PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 215
Query: 243 FSNHGQAISPGMKNRIRL 260
+ Q + ++ RL
Sbjct: 216 WDMTNQDVINAIEQDYRL 233
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 46/251 (18%)
Query: 23 ILGLGINGKV----LQIVEKKTSEVYALKVLH--DTVKARREVELQLAVGS---HKHIVN 73
++G G G+V L++ K+ V A+K L T K RR+ + ++ H ++V+
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAV-AIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+ E + + +++++E M G L +K DG FT + ++ I + +++L D
Sbjct: 109 L----EGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
HRD+ N+L NL + K++DFG ++ I
Sbjct: 164 MGYVHRDLAARNILVNS------------------NL---------VCKVSDFGLSRVIE 196
Query: 194 SNKASLQTPC---YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQA 249
+ ++ T + APE + K+ + D+WS G++M+ ++ G P++ Q
Sbjct: 197 DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 256
Query: 250 ISPGMKNRIRL 260
+ ++ RL
Sbjct: 257 VIKAIEEGYRL 267
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 22 EILGLGINGKVLQ---IVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIVN 73
+++G+G G+V V K A+K L T K RR+ + ++ H +I++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+ E + + +++I E M G L +K DG FT + ++ I S +K+L D
Sbjct: 74 L----EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGGILKLTDFGF 188
+ HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 129 MSYVHRDLAARNILVN---SNLVCKVSDFGMSRVLEDDPEAAYTTR---GGKIPIR---- 178
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHG 247
+ APE + K+ + D+WS G++M+ ++ G P++
Sbjct: 179 -------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
Query: 248 QAISPGMKNRIRL 260
Q + ++ RL
Sbjct: 220 QDVIKAIEEGYRL 232
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 48/253 (18%)
Query: 22 EILGLGINGKVLQ---IVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIVN 73
+++G+G G+V V K A+K L T K RR+ + ++ H +I++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
+ E + + +++I E M G L +K DG FT + ++ I S +K+L D
Sbjct: 80 L----EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGGILKLTDFGF 188
+ HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 135 MSYVHRDLAARNILVN---SNLVCKVSDFGMSRVLEDDPEAAYTTR---GGKIPIR---- 184
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHG 247
+ APE + K+ + D+WS G++M+ ++ G P++
Sbjct: 185 -------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
Query: 248 QAISPGMKNRIRL 260
Q + ++ RL
Sbjct: 226 QDVIKAIEEGYRL 238
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 86/333 (25%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + + + A+K L + ARR EL+L H++++ + DV
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 78 YE---NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +I + S LV + G +L ++ + A ++ ++ ++ +K++H
Sbjct: 96 FTPATSIEDFSEVYLVT--TLMGADLNNIVKSQ---ALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KP N+ + + L++ DFG A++
Sbjct: 151 GIIHRDLKPSNVAVNEDSE---------------------------LRILDFGLARQ--- 180
Query: 195 NKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
+ T +Y APE+ L Y+++ DIWS+G IM LL G+A+ PG
Sbjct: 181 ADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL---------QGKALFPG 231
Query: 254 MKNRIRLGQF----DFPNPE--WEHVSQEAKTLIKN------------------------ 283
+L + P+PE + S+ A+T I++
Sbjct: 232 SDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLL 291
Query: 284 --MLCVDPSERLTIDQVMENKWISQFNQVPQTP 314
ML +D +R++ + + + + SQ++ P
Sbjct: 292 GRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 73/312 (23%)
Query: 22 EILGLGINGKVLQ-----IVEKKTSEVYALKVL----HDTVKARREVELQLA--VGSHKH 70
+ LG G GKV++ +++ + A+K+L H T + EL++ +G+H +
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-------- 122
IVN+ G L++ C +G +L +++K D + + IM
Sbjct: 112 IVNLLGA---CTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 123 --------EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
++ + FL +N HRD+ N+L T
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT------------------------- 202
Query: 175 PGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLG 229
G I K+ DFG A+ I ++ K + + P ++APE + Y D+WS G
Sbjct: 203 --HGRITKICDFGLARHIKNDSNYVVKGNARLPVK---WMAPESIFNCVYTFESDVWSYG 257
Query: 230 VIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVD 288
+ ++ L G P+ G + I+ G F +P EH E ++K D
Sbjct: 258 IFLWELFSLGSSPY---PGMPVDSKFYKMIKEG-FRMLSP--EHAPAEMYDIMKTCWDAD 311
Query: 289 PSERLTIDQVME 300
P +R T Q+++
Sbjct: 312 PLKRPTFKQIVQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 73/312 (23%)
Query: 22 EILGLGINGKVLQ-----IVEKKTSEVYALKVL----HDTVKARREVELQLA--VGSHKH 70
+ LG G GKV++ +++ + A+K+L H T + EL++ +G+H +
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-------- 122
IVN+ G L++ C +G +L +++K D + + IM
Sbjct: 112 IVNLLGA---CTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 123 --------EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
++ + FL +N HRD+ N+L T
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT------------------------- 202
Query: 175 PGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLG 229
G I K+ DFG A+ I ++ K + + P ++APE + Y D+WS G
Sbjct: 203 --HGRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYG 257
Query: 230 VIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVD 288
+ ++ L G P+ G + I+ G F +P EH E ++K D
Sbjct: 258 IFLWELFSLGSSPY---PGMPVDSKFYKMIKEG-FRMLSP--EHAPAEMYDIMKTCWDAD 311
Query: 289 PSERLTIDQVME 300
P +R T Q+++
Sbjct: 312 PLKRPTFKQIVQ 323
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 73/312 (23%)
Query: 22 EILGLGINGKVLQ-----IVEKKTSEVYALKVL----HDTVKARREVELQLA--VGSHKH 70
+ LG G GKV++ +++ + A+K+L H T + EL++ +G+H +
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-------- 122
IVN+ G L++ C +G +L +++K D + + IM
Sbjct: 107 IVNLLGA---CTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 123 --------EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
++ + FL +N HRD+ N+L T
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH------------------------ 198
Query: 175 PGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLG 229
G I K+ DFG A+ I ++ K + + P ++APE + Y D+WS G
Sbjct: 199 ---GRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYG 252
Query: 230 VIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVD 288
+ ++ L G P+ G + I+ G F +P EH E ++K D
Sbjct: 253 IFLWELFSLGSSPY---PGMPVDSKFYKMIKEG-FRMLSP--EHAPAEMYDIMKTCWDAD 306
Query: 289 PSERLTIDQVME 300
P +R T Q+++
Sbjct: 307 PLKRPTFKQIVQ 318
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 73/312 (23%)
Query: 22 EILGLGINGKVLQ-----IVEKKTSEVYALKVL----HDTVKARREVELQLA--VGSHKH 70
+ LG G GKV++ +++ + A+K+L H T + EL++ +G+H +
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-------- 122
IVN+ G L++ C +G +L +++K D + + IM
Sbjct: 105 IVNLLGA---CTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 123 --------EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
++ + FL +N HRD+ N+L T
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH------------------------ 196
Query: 175 PGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLG 229
G I K+ DFG A+ I ++ K + + P ++APE + Y D+WS G
Sbjct: 197 ---GRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYG 250
Query: 230 VIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVD 288
+ ++ L G P+ G + I+ G F +P EH E ++K D
Sbjct: 251 IFLWELFSLGSSPY---PGMPVDSKFYKMIKEG-FRMLSP--EHAPAEMYDIMKTCWDAD 304
Query: 289 PSERLTIDQVME 300
P +R T Q+++
Sbjct: 305 PLKRPTFKQIVQ 316
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 101/243 (41%), Gaps = 52/243 (21%)
Query: 16 DYDISTEI--------LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREV----ELQL 63
DY+ E+ +G G G+V ++ +K+T A+K K R EV EL
Sbjct: 50 DYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVA 103
Query: 64 AVG-SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
G S IV + Y + G + + ME + GG L Q I+Q G E A +
Sbjct: 104 CAGLSSPRIVPL---YGAVREGPW-VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLG 157
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+ +++LH + I H DVK +N+L + DG L DFG L
Sbjct: 158 QALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDFGHA---------------LC 200
Query: 183 LTDFGFAKKIVSNKASLQTPCYTP---YYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
L G K SL T Y P ++APEV+ D DIWS +M +L G
Sbjct: 201 LQPDGLGK-------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
Query: 240 PPF 242
P+
Sbjct: 254 HPW 256
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 42/247 (17%)
Query: 13 IQDDYDISTEILGLGINGKVLQIVEKKTSEVYA----LKVLHDTVKARR---EVELQLAV 65
I D Y+I ++G G G V + +K V A L+V D + +R E+ + L
Sbjct: 51 IPDRYEIR-HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAI-LNR 108
Query: 66 GSHKHIVNIKDV--------YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREA 117
+H H+V + D+ ++ +Y V++E F+++ + TE
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELY-------VVLEIADSD--FKKLF-RTPVYLTELHI 158
Query: 118 AIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK----PEN---L 170
++ + +K++H I HRD+KP N L + +K+ DFG + PEN
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCS---VKVCDFGLARTVDYPENGNSQ 215
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLG 229
L P + + L F K + K L T +Y APE +L + Y ++ D+WS+G
Sbjct: 216 LPISPREDD-MNLVTFPHTKNL---KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG 271
Query: 230 VIMYILL 236
I LL
Sbjct: 272 CIFAELL 278
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 44/303 (14%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-ARREVELQLAVGSHKHIVNIKDV 77
+S +ILG G +G V+ + V ++L D A E++L H +++
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIR---- 73
Query: 78 YENIYNGSRCLLVIMEC--MHGGELFQRIQQKEDGAFTEREAAII--MNEICSAIKFLHD 133
Y R L + +E ++ +L + ++ ++E I + +I S + LH
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIV 193
I HRD+KP+N+L + + T ENL + ++DFG KK+
Sbjct: 134 LKIIHRDLKPQNILVSTSS-----RFTADQQTGAENLR---------ILISDFGLCKKLD 179
Query: 194 SN----KASLQTPCYTPYYVAPEVLGPD-------KYDKSCDIWSLGVIMYILLC-GFPP 241
S + +L P T + APE+L + +S DI+S+G + Y +L G P
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 242 FFSNHGQAISPGMKNRIRLGQFDFPNPEWEH---VSQEAKTLIKNMLCVDPSERLTIDQV 298
F + + N IR G F + H + EA LI M+ DP +R T +V
Sbjct: 240 FGDKYSRE-----SNIIR-GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
Query: 299 MEN 301
+ +
Sbjct: 294 LRH 296
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 125/312 (40%), Gaps = 73/312 (23%)
Query: 22 EILGLGINGKVLQ-----IVEKKTSEVYALKVL----HDTVKARREVELQLA--VGSHKH 70
+ LG G GKV++ +++ + A+K+L H T + EL++ +G+H +
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-------- 122
IVN+ G L++ C +G +L +++K D + + IM
Sbjct: 89 IVNLLGA---CTIGGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 123 --------EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTK 174
++ + FL +N HRD+ N+L T
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH------------------------ 180
Query: 175 PGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLG 229
G I K+ DFG A+ I ++ K + + P ++APE + Y D+WS G
Sbjct: 181 ---GRITKICDFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYG 234
Query: 230 VIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVD 288
+ ++ L G P+ G + I+ G F +P EH E ++K D
Sbjct: 235 IFLWELFSLGSSPY---PGMPVDSKFYKMIKEG-FRMLSP--EHAPAEMYDIMKTCWDAD 288
Query: 289 PSERLTIDQVME 300
P +R T Q+++
Sbjct: 289 PLKRPTFKQIVQ 300
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 45/203 (22%)
Query: 111 AFTEREAAIIMN---EICSAIKFLHDQNIAHRDVKPENLLYT-----KPGDGGILKLTDF 162
+ +RE + ++ +I A++FLH + + HRD+KP N+ +T K GD G++ D
Sbjct: 157 SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD- 215
Query: 163 GDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKS 222
D + + +L P A+ T Y++PE + + Y
Sbjct: 216 QDEEEQTVLTPMPA-------------------YATHXGQVGTKLYMSPEQIHGNNYSHK 256
Query: 223 CDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRL----GQFDFPNPEWEHVSQEAK 278
DI+SLG+I++ LL F S M+ R+R+ FP + QE
Sbjct: 257 VDIFSLGLILFELLYSF-----------STQME-RVRIITDVRNLKFPLLFTQKYPQE-H 303
Query: 279 TLIKNMLCVDPSERLTIDQVMEN 301
++++ML P+ER ++EN
Sbjct: 304 MMVQDMLSPSPTERPEATDIIEN 326
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 101/243 (41%), Gaps = 52/243 (21%)
Query: 16 DYDISTEI--------LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREV----ELQL 63
DY+ E+ +G G G+V ++ +K+T A+K K R EV EL
Sbjct: 66 DYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVA 119
Query: 64 AVG-SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN 122
G S IV + Y + G + + ME + GG L Q I+Q G E A +
Sbjct: 120 CAGLSSPRIVPL---YGAVREGPW-VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLG 173
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+ +++LH + I H DVK +N+L + DG L DFG L
Sbjct: 174 QALEGLEYLHTRRILHGDVKADNVLLSS--DGSRAALCDFGHA---------------LC 216
Query: 183 LTDFGFAKKIVSNKASLQTPCYTP---YYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
L G K SL T Y P ++APEV+ D DIWS +M +L G
Sbjct: 217 LQPDGLGK-------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 269
Query: 240 PPF 242
P+
Sbjct: 270 HPW 272
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 58/259 (22%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIV 72
E++G G G+V L+ KK S V A+K L T + RRE + ++ H +I+
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGEL--FQRIQQKEDGAFTEREAAIIMNEICSAIKF 130
++ V N S ++++ E M G L F R+ DG FT + ++ I S +++
Sbjct: 81 RLEGVVTN----SMPVMILTEFMENGALDSFLRLN---DGQFTVIQLVGMLRGIASGMRY 133
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAK 190
L + + HRD+ N+L NL + K++DFG ++
Sbjct: 134 LAEMSYVHRDLAARNILVNS------------------NL---------VCKVSDFGLSR 166
Query: 191 KIVSNKASLQTPCYTP--------YYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
+ N + P T + APE + K+ + D WS G++M+ ++ G P
Sbjct: 167 FLEENSSD---PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
Query: 242 FFSNHGQAISPGMKNRIRL 260
++ Q + ++ RL
Sbjct: 224 YWDMSNQDVINAIEQDYRL 242
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ D+G A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDYGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 36 VEKKTSEVYALKVL-HDTVKARREVELQLAVG---SHKHIVNIKDVYENIYNGSRCLLVI 91
++ T EV A+K L H T + R+ E ++ + H +IV K V + G R L +I
Sbjct: 35 LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--GRRNLKLI 92
Query: 92 MECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKP 151
ME + G L +Q+ ++ + ++IC +++L + HR++ N+L
Sbjct: 93 MEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNIL---- 147
Query: 152 GDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA--SLQTPCYTP-YY 208
V+ EN + K+ DFG K + +K ++ P +P ++
Sbjct: 148 -------------VENENRV----------KIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILL 236
APE L K+ + D+WS GV++Y L
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 51/283 (18%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLA-VGSHKHI------VNIKD 76
LG G G+V ++ K+ +YA+K + ++ +LA VGSH+ + V ++
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
+E G L C G Q+ + + E + + + A+ LH Q +
Sbjct: 125 AWEE---GGILYLQTELC---GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
H DVKP N+ G G KL DFG L + G G ++ +
Sbjct: 179 VHLDVKPANIFL---GPRGRCKLGDFG-------LLVELGTAGAGEVQEG---------- 218
Query: 197 ASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
P Y+APE+L Y + D++SLG+ + + C + G +
Sbjct: 219 --------DPRYMAPELL-QGSYGTAADVFSLGLTILEVACNM---------ELPHGGEG 260
Query: 257 RIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
+L Q P +S E ++++ ML DP R T + ++
Sbjct: 261 WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + IL D G+ + TD +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKIL-------------------DAGLARHTDDEMTGYV 183
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 184 A-----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 86/333 (25%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + + + A+K L + ARR EL+L H++++ + DV
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 78 YE---NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +I + S LV + G +L ++ + A ++ ++ ++ +K++H
Sbjct: 96 FTPATSIEDFSEVYLVT--TLMGADLNNIVKCQ---ALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KP N+ + + L++ DFG A++
Sbjct: 151 GIIHRDLKPSNVAVNEDSE---------------------------LRILDFGLARQ--- 180
Query: 195 NKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
+ T +Y APE+ L Y+++ DIWS+G IM LL G+A+ PG
Sbjct: 181 ADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL---------QGKALFPG 231
Query: 254 MKNRIRLGQF----DFPNPE--WEHVSQEAKTLIKN------------------------ 283
+L + P+PE + S+ A+T I++
Sbjct: 232 SDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLL 291
Query: 284 --MLCVDPSERLTIDQVMENKWISQFNQVPQTP 314
ML +D +R++ + + + + SQ++ P
Sbjct: 292 GRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 37/196 (18%)
Query: 114 EREAAIIMN---EICSAIKFLHDQNIAHRDVKPENLLYT-----KPGDGGILKLTDFGDV 165
ERE ++ ++ +I A++FLH + + HRD+KP N+ +T K GD G++ D D
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD-QDE 172
Query: 166 KPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDI 225
+ + +L P +A+ L Y++PE + + Y DI
Sbjct: 173 EEQTVLTPMP-----------AYARHTGQVGTKL--------YMSPEQIHGNSYSHKVDI 213
Query: 226 WSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+SLG+I++ LL +P FS + + + + FP P + ++++ML
Sbjct: 214 FSLGLILFELL--YP--FSTQMERV----RTLTDVRNLKFP-PLFTQKYPCEYVMVQDML 264
Query: 286 CVDPSERLTIDQVMEN 301
P ER ++EN
Sbjct: 265 SPSPMERPEAINIIEN 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D HRD+ N+L NL + K++DFG A+ +
Sbjct: 165 DMGYVHRDLAARNILIN------------------SNL---------VCKVSDFGLARVL 197
Query: 193 VSNKASLQTP--CYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQ 248
+ + T P + +PE + K+ + D+WS G++++ ++ G P++ Q
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 249 AISPGMKNRIRL 260
+ + RL
Sbjct: 258 DVIKAVDEGYRL 269
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ DF A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILDFYLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 40/199 (20%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H +I+++ E + S+ ++++ E M G L +K DG FT + ++ I +
Sbjct: 82 HPNIIHL----EGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGGILK 182
+K+L D HRD+ N+L + K++DFG + PE T+ GG +
Sbjct: 137 MKYLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLSRVLEDDPEAAYTTR---GGKIP 190
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
+ + APE + K+ + D+WS G++M+ ++ G P
Sbjct: 191 IR-----------------------WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
Query: 242 FFSNHGQAISPGMKNRIRL 260
++ Q + ++ RL
Sbjct: 228 YWEMTNQDVIKAVEEGYRL 246
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I+E M G L +++ + + +I SA+++L +N HRD
Sbjct: 79 ----EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 135 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTXTAH 167
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 92/234 (39%), Gaps = 47/234 (20%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVL---HDT---VKARREVELQLAVGSHKHIV 72
I + LG G V + K T + ALK + H+ A REV L L H +IV
Sbjct: 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSL-LKDLKHANIV 63
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED---GAFTEREAAIIMNEICSAIK 129
+ D I + + L ++ E + + ++Q D + + ++ +
Sbjct: 64 TLHD----IIHTEKSLTLVFEYLD-----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
+ H Q + HRD+KP+NLL + G+ LKL DFG A
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGE---------------------------LKLADFGLA 147
Query: 190 KKIVSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+ + T +Y P++ LG Y D+W +G I Y + G P F
Sbjct: 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I+E M G L +++ + + +I SA+++L +N HRD
Sbjct: 81 ----EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 137 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 169
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 73/245 (29%)
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
++ +I I +LH + HRD+KP N+L G+G PE G
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVM--GEG------------PER---------G 169
Query: 180 ILKLTDFGFAKKIVS---NKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGVIMYIL 235
+K+ D GFA+ S A L T +Y APE +LG Y K+ DIW++G I L
Sbjct: 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD-------FP-NPEWEHVSQ--EAKTLIKN-- 283
L P F H + N Q D FP + +WE + + E TL+K+
Sbjct: 230 LTSEPIF---HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFR 286
Query: 284 ------------------------------MLCVDPSERLTIDQVMENKWISQFNQVPQT 313
+L +DP +R+T +Q M++ + + + +P +
Sbjct: 287 RNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE-DPLPTS 345
Query: 314 PLCTG 318
+ G
Sbjct: 346 DVFAG 350
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 61/243 (25%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA------RREVELQLAVGSHKHIV 72
+ GLG VL++ A+K+L T A E+++ +G H++IV
Sbjct: 63 VEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGEL-FQRIQQ-----KEDGAFTE-REAAIIMNEIC 125
N+ +G L++ C +G L F R + KEDG E R+ +++
Sbjct: 114 NLLGA---CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+ FL +N HRDV N+L T +G + K+ D
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLLT---------------------------NGHVAKIGD 203
Query: 186 FGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGF 239
FG A+ I+++ K + + P ++APE + Y D+WS G++++ I G
Sbjct: 204 FGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 260
Query: 240 PPF 242
P+
Sbjct: 261 NPY 263
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 35/296 (11%)
Query: 23 ILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARR----EVELQLAVGSHKHIVNIKDVY 78
+LG G G+V++ S YA+K + T + EV L LA +H+++V +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXL-LASLNHQYVVRYYAAW 71
Query: 79 ENIYNGSR---------CLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIK 129
N + L + E L+ I E+ E + +I A+
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALS 130
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
++H Q I HR++KP N+ + + +K+ DFG K + + D ILKL +
Sbjct: 131 YIHSQGIIHRNLKPXNIFIDESRN---VKIGDFGLAKNVH----RSLD--ILKLD----S 177
Query: 190 KKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ 248
+ + + +L + T YVA EVL G Y++ D +SLG+I + + +P FS +
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YP--FSTGXE 233
Query: 249 AISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
++ + ++R +FP ++ + K +I+ ++ DP++R ++ + W+
Sbjct: 234 RVN--ILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 61/243 (25%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA------RREVELQLAVGSHKHIV 72
+ GLG VL++ A+K+L T A E+++ +G H++IV
Sbjct: 55 VEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGEL-FQRIQQ-----KEDGAFTE-REAAIIMNEIC 125
N+ +G L++ C +G L F R + KEDG E R+ +++
Sbjct: 106 NLLGA---CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+ FL +N HRDV N+L T +G + K+ D
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLLT---------------------------NGHVAKIGD 195
Query: 186 FGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGF 239
FG A+ I+++ K + + P ++APE + Y D+WS G++++ I G
Sbjct: 196 FGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 252
Query: 240 PPF 242
P+
Sbjct: 253 NPY 255
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I+E M G L +++ + + +I SA+++L +N HRD
Sbjct: 81 ----EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 137 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 169
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + IL D G+ + TD +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKIL-------------------DRGLARHTDDEMTGYV 183
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 184 A-----------TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ G I
Sbjct: 165 DMGFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI------- 214
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 215 -------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + KT A+K L + A+R EL+L H++++ + DV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 78 YENIYNGSRCL-----LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ +R L + ++ + G +L ++ ++ T+ ++ +I +K++H
Sbjct: 90 F----TPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIH 142
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
+I HRD+KP NL + + LK+ FG A+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCE---------------------------LKILGFGLARH- 174
Query: 193 VSNKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNHGQ 248
+ T +Y APE+ L Y+++ DIWS+G IM LL G FP ++H
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG--TDHID 230
Query: 249 AI--------SPG---------------MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML 285
+ +PG +++ ++ + +F N + + A L++ ML
Sbjct: 231 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKML 289
Query: 286 CVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
+D +R+T Q + + + +Q++ P+
Sbjct: 290 VLDSDKRITAAQALAHAYFAQYHDPDDEPVA 320
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I+E M G L +++ + +I SA+++L +N HRD
Sbjct: 82 ----EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 138 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTXTAH 170
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 77 SHEKLVQLYGVCTK----QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 131
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DF
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVN---------------------------DQGVVKVSDF 164
Query: 187 GFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF-- 242
G ++ ++ ++ + P + PEVL K+ DIW+ GV+M+ I G P+
Sbjct: 165 GLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 243 FSNHGQA--ISPGMK 255
F+N A I+ G++
Sbjct: 225 FTNSETAEHIAQGLR 239
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 47/260 (18%)
Query: 15 DDYDISTE-ILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS 67
D +IS + ++G G G+V L++ KK + + LKV + T K RR+ + ++
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMG 101
Query: 68 ---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +I+ + E + S+ ++++ E M G L +K D FT + ++ I
Sbjct: 102 QFDHPNIIRL----EGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
S +K+L D HRD+ N+L NL + K++
Sbjct: 157 ASGMKYLSDMGAVHRDLAARNILIN------------------SNL---------VCKVS 189
Query: 185 DFGFAKKIVSNKASLQTP--CYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFP 240
DFG ++ + + + T P + +PE + K+ + D+WS G++++ ++ G
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 241 PFFSNHGQAISPGMKNRIRL 260
P++ Q + + RL
Sbjct: 250 PYWEMSNQDVIKAVDEGYRL 269
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 61 SHEKLVQLYGVC----TKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 115
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DF
Sbjct: 116 AMEYLESKQFLHRDLAARNCL---------------------------VNDQGVVKVSDF 148
Query: 187 GFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF-- 242
G ++ ++ ++ + P + PEVL K+ DIW+ GV+M+ I G P+
Sbjct: 149 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
Query: 243 FSNHGQA--ISPGMK 255
F+N A I+ G++
Sbjct: 209 FTNSETAEHIAQGLR 223
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 39/167 (23%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN---EI 124
H +IV D +E+ G +C++++ E G L +++ F + ++ + +I
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR-----FKVXKIKVLRSWCRQI 138
Query: 125 CSAIKFLHDQN--IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
++FLH + I HRD+K +N+ T P G V K GD G+
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGPT----------GSV--------KIGDLGLAT 180
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLG 229
L FAK ++ TP + APE +KYD+S D+++ G
Sbjct: 181 LKRASFAKAVIG----------TPEFXAPEXY-EEKYDESVDVYAFG 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 62 SHEKLVQLYGVC----TKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 116
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DF
Sbjct: 117 AMEYLESKQFLHRDLAARNCL---------------------------VNDQGVVKVSDF 149
Query: 187 GFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF-- 242
G ++ ++ ++ + P + PEVL K+ DIW+ GV+M+ I G P+
Sbjct: 150 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
Query: 243 FSNHGQA--ISPGMK 255
F+N A I+ G++
Sbjct: 210 FTNSETAEHIAQGLR 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I+E M G L +++ + +I SA+++L +N HRD
Sbjct: 86 ----EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 142 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 174
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 57 SHEKLVQLYGVC----TKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 111
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DF
Sbjct: 112 AMEYLESKQFLHRDLAARNCL---------------------------VNDQGVVKVSDF 144
Query: 187 GFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF-- 242
G ++ ++ ++ + P + PEVL K+ DIW+ GV+M+ I G P+
Sbjct: 145 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
Query: 243 FSNHGQA--ISPGMK 255
F+N A I+ G++
Sbjct: 205 FTNSETAEHIAQGLR 219
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 80
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 81 RL----EGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ G I
Sbjct: 136 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI------- 185
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 186 -------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 227 NQDVIKAVDEGYRL 240
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 165 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTR---GGKIPIR--- 215
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 216 --------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 62 SHEKLVQLYGVC----TKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 116
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DFG L+ +
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFG-------------------LSRY 154
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF--F 243
+ S++ S ++P PEVL K+ DIW+ GV+M+ I G P+ F
Sbjct: 155 VLDDEYTSSRGSKFPVRWSP----PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
Query: 244 SNHGQA--ISPGMK 255
+N A I+ G++
Sbjct: 211 TNSETAEHIAQGLR 224
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + + +I SA+++L +N HRD
Sbjct: 86 ----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 142 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 174
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 68 SHEKLVQLYGVCTK----QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 122
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DF
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVN---------------------------DQGVVKVSDF 155
Query: 187 GFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF-- 242
G ++ ++ ++ + P + PEVL K+ DIW+ GV+M+ I G P+
Sbjct: 156 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
Query: 243 FSNHGQA--ISPGMK 255
F+N A I+ G++
Sbjct: 216 FTNSETAEHIAQGLR 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 38/195 (19%)
Query: 67 SHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
SH+ +V + V R + +I E M G L +++ F ++ + ++C
Sbjct: 77 SHEKLVQLYGVCTK----QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCE 131
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+++L + HRD+ N L D G++K++DF
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVN---------------------------DQGVVKVSDF 164
Query: 187 GFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF-- 242
G ++ ++ ++ + P + PEVL K+ DIW+ GV+M+ I G P+
Sbjct: 165 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 243 FSNHGQA--ISPGMK 255
F+N A I+ G++
Sbjct: 225 FTNSETAEHIAQGLR 239
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + + +I SA+++L +N HRD
Sbjct: 81 ----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 137 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 169
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 165 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTR---GGKIPIR--- 215
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 216 --------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 165 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTR---GGKIPIR--- 215
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 216 --------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + + +I SA+++L +N HRD
Sbjct: 79 ----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 135 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTXTAH 167
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 86 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 142 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTXTAH 174
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVYALKVLH--DTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK V A+K L T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 165 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTR---GGKIPIR--- 215
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 216 --------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + + +I SA+++L +N HRD
Sbjct: 81 ----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 137 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 169
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 86/333 (25%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVL----HDTVKARREV-ELQLAVG-SHKHIVNIKDV 77
+G G G V + + + A+K L + ARR EL+L H++++ + DV
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 78 YE---NIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQ 134
+ +I + S LV + G +L ++ + A ++ ++ ++ +K++H
Sbjct: 88 FTPATSIEDFSEVYLVT--TLMGADLNNIVKCQ---ALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 135 NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
I HRD+KP N+ + + L++ DFG A++
Sbjct: 143 GIIHRDLKPSNVAVNEDCE---------------------------LRILDFGLARQ--- 172
Query: 195 NKASLQTPCYTPYYVAPEV-LGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
+ T +Y APE+ L Y+++ DIWS+G IM LL G+A+ PG
Sbjct: 173 ADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL---------QGKALFPG 223
Query: 254 MKNRIRLGQF----DFPNPE--WEHVSQEAKTLIKN------------------------ 283
+L + P+PE + S+ A+T I++
Sbjct: 224 SDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLL 283
Query: 284 --MLCVDPSERLTIDQVMENKWISQFNQVPQTP 314
ML +D +R++ + + + + SQ++ P
Sbjct: 284 GRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 107
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 108 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ GG + +
Sbjct: 163 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTR---GGKIPIR--- 213
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 214 --------------------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 253
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 254 NQDVIKAVDEGYRL 267
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ G I
Sbjct: 165 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI------- 214
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 215 -------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 80
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 81 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ G I
Sbjct: 136 DMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI------- 185
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 186 -------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 227 NQDVIKAVDEGYRL 240
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 51/262 (19%)
Query: 15 DDYDISTE-ILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS 67
D +IS + ++G G G+V L++ KK + + LKV + T K RR+ + ++
Sbjct: 31 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMG 89
Query: 68 ---HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEI 124
H +I+ + E + S+ ++++ E M G L +K D FT + ++ I
Sbjct: 90 QFDHPNIIRL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 144
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-----PENLLYTKPGDGG 179
S +K+L D HRD+ N+L + K++DFG + PE T+ G
Sbjct: 145 ASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCG 238
I + +PE + K+ + D+WS G++++ ++ G
Sbjct: 202 I--------------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 235
Query: 239 FPPFFSNHGQAISPGMKNRIRL 260
P++ Q + + RL
Sbjct: 236 ERPYWEMSNQDVIKAVDEGYRL 257
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + + +I SA+++L +N HRD
Sbjct: 79 ----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 135 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTFTAH 167
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 86 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 142 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 174
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 50/254 (19%)
Query: 22 EILGLGINGKV----LQIVEKK--TSEVYALKVLHDTVKARREVELQLAVGS---HKHIV 72
+++G G G+V L++ KK + + LKV + T K RR+ + ++ H +I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNII 109
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + S+ ++++ E M G L +K D FT + ++ I S +K+L
Sbjct: 110 RL----EGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFG-----DVKPENLLYTKPGDGGILKLTDFG 187
D HRD+ N+L + K++DFG + PE T+ G I
Sbjct: 165 DMGYVHRDLAARNILINS---NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI------- 214
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNH 246
+ +PE + K+ + D+WS G++++ ++ G P++
Sbjct: 215 -------------------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 247 GQAISPGMKNRIRL 260
Q + + RL
Sbjct: 256 NQDVIKAVDEGYRL 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 85 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 141 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 173
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 86 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 142 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 174
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 83 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 139 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 171
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 101/273 (36%), Gaps = 67/273 (24%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWISQFNQVPQTPLCTGKMLKEG 324
RLT + ME+ + + P +L G
Sbjct: 312 RLTAREAMEHPYFYPVVKEQSQPCADNAVLSSG 344
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 94 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 150 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 182
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 83 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 139 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 171
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 81 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 137 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 169
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 81 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 137 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 169
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 165
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 166 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 214
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 215 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 274
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 275 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 42/214 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M+ G L ++ E A + ++ + + ++ N HRD++ N+L
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 137
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+G I K+ DFG A+ I N+ + + P
Sbjct: 138 V---------------------------GNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L+ G+ PGM NR L Q
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELV--------TKGRVPYPGMNNREVLEQVERG 222
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTID 296
+ P P+ +S L+ + DP ER T +
Sbjct: 223 YRMPCPQDCPIS--LHELMIHCWKKDPEERPTFE 254
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 24 LGLGINGKV----LQIVEKKTSEVYALKVLHDTVKAR------REVELQLAVGSHKHIVN 73
LG G GKV T E+ A+K L + + RE+E+ L H+HIV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI-LRTLYHEHIVK 75
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
K E+ G + + ++ME + G L + + G + + +IC + +LH
Sbjct: 76 YKGCCED--QGEKSVQLVMEYVPLGSLRDYLPRHCVGL---AQLLLFAQQICEGMAYLHA 130
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK--PENLLYTKPGDGGILKLTDFGFAKK 191
Q+ HR + N+L + ++K+ DFG K PE Y + + G
Sbjct: 131 QHYIHRALAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDG------------ 175
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
+P ++ APE L K+ + D+WS GV +Y LL
Sbjct: 176 --------DSPV---FWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 164
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 165 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 274 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 164
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 165 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 274 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 142 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 185
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 186 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 234
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 235 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRK 294
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 295 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 164
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 165 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 274 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 24 LGLGINGKV----LQIVEKKTSEVYALKVLHDTVKAR------REVELQLAVGSHKHIVN 73
LG G GKV T E+ A+K L + + RE+E+ L H+HIV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI-LRTLYHEHIVK 74
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHD 133
K E+ G + + ++ME + G L + + G + + +IC + +LH
Sbjct: 75 YKGCCED--QGEKSVQLVMEYVPLGSLRDYLPRHCVGL---AQLLLFAQQICEGMAYLHA 129
Query: 134 QNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK--PENLLYTKPGDGGILKLTDFGFAKK 191
Q+ HR + N+L + ++K+ DFG K PE Y + + G
Sbjct: 130 QHYIHRALAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDG------------ 174
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
+P ++ APE L K+ + D+WS GV +Y LL
Sbjct: 175 --------DSPV---FWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 164
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 165 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 274 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 165
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 166 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 214
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 215 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 274
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 275 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 33/171 (19%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H+HI+ K E+ G + L ++ME + G L + + G + + +IC
Sbjct: 75 HEHIIKYKGCCED--QGEKSLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFAQQICEG 129
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK--PENLLYTKPGDGGILKLTD 185
+ +LH Q+ HR++ N+L + ++K+ DFG K PE Y + + G
Sbjct: 130 MAYLHSQHYIHRNLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDG------ 180
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
+P ++ APE L K+ + D+WS GV +Y LL
Sbjct: 181 --------------DSPV---FWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 123 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 166
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 167 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 215
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 216 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 275
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 276 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + + +I SA+++L +N HR+
Sbjct: 288 ----EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 344 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 376
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 164
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 165 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 274 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 58/227 (25%)
Query: 111 AFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENL 170
T+ + + E+ A+ + H Q I HRDVKP N++ D + K
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----DHELRK------------ 164
Query: 171 LYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLG 229
L+L D+G A+ K + Y+ PE+L YD S D+WSLG
Sbjct: 165 ----------LRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 230 VIMYILLCGFPPFF---SNHGQAI-------SPGM-----KNRIRLG------------- 261
+ ++ PFF NH Q + + G+ K RI L
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 262 -QFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQ 306
F N + +H VS EA + +L D ERLT + M + + Q
Sbjct: 274 PWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 82 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 138 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAP 170
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 46/252 (18%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIV 72
+I+G G +G+V L++ ++ V A+K L T + RR+ + ++ H +I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPV-AIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + R +++ E M G L + DG FT + ++ + + +++L
Sbjct: 114 RL----EGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D HRD+ N+L NL + K++DFG ++ +
Sbjct: 169 DLGYVHRDLAARNVLVDS------------------NL---------VCKVSDFGLSRVL 201
Query: 193 VS--NKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQ 248
+ A T P + APE + + + D+WS GV+M+ +L G P+++ +
Sbjct: 202 EDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
Query: 249 AISPGMKNRIRL 260
+ ++ RL
Sbjct: 262 DVISSVEEGYRL 273
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HRD
Sbjct: 83 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 139 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAP 171
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 65/247 (26%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA------RREVELQLAVGSHKHIV 72
+ GLG VL++ A+K+L T A E+++ +G H++IV
Sbjct: 63 VEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGEL-FQRIQQK---EDGAF-------TEREAAIIM 121
N+ +G L++ C +G L F R + + D AF + R+
Sbjct: 114 NLLGA---CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 122 NEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGIL 181
+++ + FL +N HRDV N+L T +G +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLT---------------------------NGHVA 203
Query: 182 KLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
K+ DFG A+ I+++ K + + P ++APE + Y D+WS G++++ I
Sbjct: 204 KIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIF 260
Query: 236 LCGFPPF 242
G P+
Sbjct: 261 SLGLNPY 267
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 33/171 (19%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H+HI+ K E+ G + L ++ME + G L + + G + + +IC
Sbjct: 75 HEHIIKYKGCCED--QGEKSLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFAQQICEG 129
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK--PENLLYTKPGDGGILKLTD 185
+ +LH Q+ HR++ N+L + ++K+ DFG K PE Y + + G
Sbjct: 130 MAYLHAQHYIHRNLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDG------ 180
Query: 186 FGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
+P ++ APE L K+ + D+WS GV +Y LL
Sbjct: 181 --------------DSPV---FWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 53/248 (21%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H+HI+ K E+ G+ L ++ME + G L + + G + + +IC
Sbjct: 92 HEHIIKYKGCCED--AGAASLQLVMEYVPLGSLRDYLPRHSIGL---AQLLLFAQQICEG 146
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +LH Q+ HRD+ N+L + ++K+ DFG
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLD---------------------------NDRLVKIGDFG 179
Query: 188 FAKKIVSNKASLQ------TPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF-- 239
AK + + +P + + APE L K+ + D+WS GV +Y LL
Sbjct: 180 LAKAVPEGHEXYRVREDGDSPVF---WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDS 236
Query: 240 ---PPFFSNHGQAISPGMKNRIRLGQF-----DFPNPEWEHVSQEAKTLIKNMLCVDPSE 291
PP I+ G +RL + P P + E L+KN + S
Sbjct: 237 SQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP--DKCPAEVYHLMKNCWETEASF 294
Query: 292 RLTIDQVM 299
R T + ++
Sbjct: 295 RPTFENLI 302
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 67/248 (27%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA------RREVELQLAVGSHKHIV 72
+ GLG VL++ A+K+L T A E+++ +G H++IV
Sbjct: 63 VEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE-----DGAF-------TEREAAII 120
N+ +G L++ C +G +L +++K D AF + R+
Sbjct: 114 NLLGA---CTHGGPVLVITEYCCYG-DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
+++ + FL +N HRDV N+L T +G +
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLT---------------------------NGHV 202
Query: 181 LKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-I 234
K+ DFG A+ I+++ K + + P ++APE + Y D+WS G++++ I
Sbjct: 203 AKIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEI 259
Query: 235 LLCGFPPF 242
G P+
Sbjct: 260 FSLGLNPY 267
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 45/239 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQLAVGSHK- 69
D Y+I + ++G G G+V++ ++ E A+K++ + +A+ EV L + H
Sbjct: 54 DRYEIDS-LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 70 ----HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+IV++K + ++ CL+ M + +L + + R+ A ++C
Sbjct: 113 EMKYYIVHLKRHF--MFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFA---QQMC 167
Query: 126 SAIKFLH--DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKL 183
+A+ FL + +I H D+KPEN+L P I K+
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXAI-------------------------KI 202
Query: 184 TDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
DFG + ++ + + +Y +PEVL YD + D+WSLG I+ + G P F
Sbjct: 203 VDFGSSCQL---GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L + L+L D+G + + PG +++
Sbjct: 161 NVLIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HR+
Sbjct: 285 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 341 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 373
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 374 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 91/248 (36%), Gaps = 66/248 (26%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
T+ + M E+ A+ + H + I HRDVKP N++ D K
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVM------------IDHQQKK----- 171
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGV 230
L+L D+G A+ + Y+ PE+L YD S D+WSLG
Sbjct: 172 ---------LRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 221
Query: 231 IMYILLCGFPPFFSNHGQ---------------------------AISP------GMKNR 257
++ ++ PFF HGQ + P G +R
Sbjct: 222 MLASMIFRREPFF--HGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSR 279
Query: 258 IRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQTPLC 316
R +F + E H VS EA L+ +L D +RLT + ME+ + + P
Sbjct: 280 KRWE--NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPSA 337
Query: 317 TGKMLKEG 324
+L G
Sbjct: 338 DNAVLSSG 345
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 46/252 (18%)
Query: 22 EILGLGINGKV----LQIVEKKTSEVYALKVLHD--TVKARREVELQLAVGS---HKHIV 72
+I+G G +G+V L++ ++ V A+K L T + RR+ + ++ H +I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPV-AIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLH 132
+ E + R +++ E M G L + DG FT + ++ + + +++L
Sbjct: 114 RL----EGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 133 DQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI 192
D HRD+ N+L NL + K++DFG ++ +
Sbjct: 169 DLGYVHRDLAARNVLVDS------------------NL---------VCKVSDFGLSRVL 201
Query: 193 VS--NKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQ 248
+ A T P + APE + + + D+WS GV+M+ +L G P+++ +
Sbjct: 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
Query: 249 AISPGMKNRIRL 260
+ ++ RL
Sbjct: 262 DVISSVEEGYRL 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V + V KK S A+K L + E + AV H ++V + V
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRD 140
+I E M G L +++ + +I SA+++L +N HR+
Sbjct: 327 ----EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 141 VKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQ 200
+ N L G+ ++K+ DFG ++ + + +
Sbjct: 383 LAARNCLV---------------------------GENHLVKVADFGLSRLMTGDTYTAH 415
Query: 201 TPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
P + APE L +K+ D+W+ GV+++ I G P+
Sbjct: 416 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + F++++Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTD-FKQLRQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 89/229 (38%), Gaps = 46/229 (20%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGS---HKHIVNIKDVYEN 80
LG G G+V V KK S A+K L + E + AV H ++V + V
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV--- 96
Query: 81 IYNGSRCLL-----VIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQN 135
C L ++ E M G L +++ T + +I SA+++L +N
Sbjct: 97 ------CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 136 IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSN 195
HRD+ N L G+ ++K+ DFG ++ + +
Sbjct: 151 FIHRDLAARNCLV---------------------------GENHVVKVADFGLSRLMTGD 183
Query: 196 KASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPF 242
+ P + APE L + + D+W+ GV+++ I G P+
Sbjct: 184 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 95 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 197
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 198 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 246 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 298
Query: 296 DQVMEN 301
Q++E+
Sbjct: 299 KQLVED 304
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 90 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADFGLAR---------- 192
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 193 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 241 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 293
Query: 296 DQVMEN 301
Q++E+
Sbjct: 294 KQLVED 299
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 105 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 159
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 160 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 192
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 252
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 253 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 310
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 311 RLTAREAMEHPYF 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 104 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 158
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 159 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 191
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 251
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 252 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 309
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 310 RLTAREAMEHPYF 322
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 106 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 161 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 193
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 253
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 254 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 311
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 312 RLTAREAMEHPYF 324
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 149 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 251
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 252 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 299
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 300 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 352
Query: 296 DQVMEN 301
Q++E+
Sbjct: 353 KQLVED 358
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 105 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 159
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 160 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 192
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 252
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 253 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 310
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 311 RLTAREAMEHPYF 323
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 92 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 194
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 195 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 243 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 295
Query: 296 DQVMEN 301
Q++E+
Sbjct: 296 KQLVED 301
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGA---FTEREAAIIMNEICSAIKFLHDQN--IAHRDVK 142
L ++ E + G L++ + + GA ER + ++ + +LH++N I HR++K
Sbjct: 109 LSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLK 166
Query: 143 PENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTP 202
NLL K YT +K+ DFG ++ S S ++
Sbjct: 167 SPNLLVDKK--------------------YT-------VKVCDFGLSRLKASTFLSSKSA 199
Query: 203 CYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYIL 235
TP ++APEVL + ++ D++S GVI++ L
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 67/253 (26%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
SR ++ E ++ + Q Q T+ + M EI A+ + H I HRDVKP
Sbjct: 111 SRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 165
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N++ + L+L D+G + + PG +++
Sbjct: 166 NVMIDH--EHRKLRLIDWGLAE-----FYHPGQEYNVRVA-------------------- 198
Query: 205 TPYYVAPEVL-GPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ--------------- 248
+ Y+ PE+L YD S D+WSLG ++ ++ PFF H
Sbjct: 199 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED 258
Query: 249 ----------AISP------GMKNRIRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSE 291
+ P G +R R + F + E +H VS EA + +L D
Sbjct: 259 LYDYIDKYNIELDPRFNDILGRHSRKRWER--FVHSENQHLVSPEALDFLDKLLRYDHQS 316
Query: 292 RLTIDQVMENKWI 304
RLT + ME+ +
Sbjct: 317 RLTAREAMEHPYF 329
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG------DVKPENLLYTK 174
M + A+K +H I HRDVKP N LY + L DFG D K E L + +
Sbjct: 123 MLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK--YALVDFGLAQGTHDTKIELLKFVQ 180
Query: 175 PGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLG--PDKYDKSCDIWSLGVIM 232
+ +S + + TP + APEVL P++ + D+WS GVI
Sbjct: 181 --SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ-TTAIDMWSAGVIF 237
Query: 233 YILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLC 286
LL G PF+ + IR + Q AKT K++LC
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRGSR---------ETIQAAKTFGKSILC 282
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 103 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++++ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 103 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 66/228 (28%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
T+ + M E+ A+ + H + I HRDVKP N++ D K
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVM------------IDHQQKK----- 176
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVL-GPDKYDKSCDIWSLGV 230
L+L D+G A+ + Y+ PE+L YD S D+WSLG
Sbjct: 177 ---------LRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 226
Query: 231 IMYILLCGFPPFFSNHGQ---------------------------AISP------GMKNR 257
++ ++ PFF HGQ + P G +R
Sbjct: 227 MLASMIFRREPFF--HGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSR 284
Query: 258 IRLGQFDFPNPEWEH-VSQEAKTLIKNMLCVDPSERLTIDQVMENKWI 304
R +F + E H VS EA L+ +L D +RLT + ME+ +
Sbjct: 285 KRWE--NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 40/283 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNI 74
E +G G G V + V++ +YA+K D A REV +G H H+V
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 71
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED--GAFTEREAAIIMNEICSAIKFLH 132
Y + + +L+ E +GG L I + F E E ++ ++ ++++H
Sbjct: 72 ---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 128
Query: 133 DQNIAHRDVKPENLLYTKPG-DGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
++ H D+KP N+ ++ + D D +++ K+ D G +
Sbjct: 129 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF---------KIGDLGHVTR 179
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
I +S Q ++A EVL + + DI++L + + + G P N Q
Sbjct: 180 I----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQW- 233
Query: 251 SPGMKNRIRLGQFDFPNPEWEHV-SQEAKTLIKNMLCVDPSER 292
+ IR G+ P V SQE L+K M+ DP R
Sbjct: 234 -----HEIRQGRL----PRIPQVLSQEFTELLKVMIHPDPERR 267
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 69/250 (27%)
Query: 19 ISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTVKA------RREVELQLAVGSHKHIV 72
+ GLG VL++ A+K+L T A E+++ +G H++IV
Sbjct: 63 VEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTEREAA 118
N+ +G L++ C +G +L +++K + + R+
Sbjct: 114 NLLGA---CTHGGPVLVITEYCCYG-DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 119 IIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+++ + FL +N HRDV N+L T +G
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLT---------------------------NG 202
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ K+ DFG A+ I+++ K + + P ++APE + Y D+WS G++++
Sbjct: 203 HVAKIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLW 259
Query: 234 -ILLCGFPPF 242
I G P+
Sbjct: 260 EIFSLGLNPY 269
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 40/283 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNI 74
E +G G G V + V++ +YA+K D A REV +G H H+V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED--GAFTEREAAIIMNEICSAIKFLH 132
Y + + +L+ E +GG L I + F E E ++ ++ ++++H
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 133 DQNIAHRDVKPENLLYTKPG-DGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
++ H D+KP N+ ++ + D D +++ K+ D G +
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF---------KIGDLGHVTR 181
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
I +S Q ++A EVL + + DI++L + + + G P N Q
Sbjct: 182 I----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW- 235
Query: 251 SPGMKNRIRLGQFDFPNPEWEHV-SQEAKTLIKNMLCVDPSER 292
+ IR G+ P V SQE L+K M+ DP R
Sbjct: 236 -----HEIRQGRL----PRIPQVLSQEFTELLKVMIHPDPERR 269
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 40/283 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNI 74
E +G G G V + V++ +YA+K D A REV +G H H+V
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 75
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED--GAFTEREAAIIMNEICSAIKFLH 132
Y + + +L+ E +GG L I + F E E ++ ++ ++++H
Sbjct: 76 ---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 132
Query: 133 DQNIAHRDVKPENLLYTKPG-DGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
++ H D+KP N+ ++ + D D +++ K+ D G +
Sbjct: 133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF---------KIGDLGHVTR 183
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
I +S Q ++A EVL + + DI++L + + + G P N Q
Sbjct: 184 I----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW- 237
Query: 251 SPGMKNRIRLGQFDFPNPEWEHV-SQEAKTLIKNMLCVDPSER 292
+ IR G+ P V SQE L+K M+ DP R
Sbjct: 238 -----HEIRQGRL----PRIPQVLSQEFTELLKVMIHPDPERR 271
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +E
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 195
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 196 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 233
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 286
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 287 DCWHAVPSQRPTFKQLVED 305
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 34/174 (19%)
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIK 129
H+V I D E +G L V ++G +L ++++ G A I+ +I SA+
Sbjct: 95 HVVPIHDFGE--IDGQ--LYVDXRLINGVDLAAXLRRQ--GPLAPPRAVAIVRQIGSALD 148
Query: 130 FLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA 189
H HRDVKPEN+L V ++ Y L DFG A
Sbjct: 149 AAHAAGATHRDVKPENIL-----------------VSADDFAY----------LVDFGIA 181
Query: 190 KKIVSNKAS-LQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
K + L T YY APE DI++L ++Y L G PP+
Sbjct: 182 SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 40/283 (14%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLH-------DTVKARREVELQLAVGSHKHIVNI 74
E +G G G V + V++ +YA+K D A REV +G H H+V
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 75 KDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED--GAFTEREAAIIMNEICSAIKFLH 132
Y + + +L+ E +GG L I + F E E ++ ++ ++++H
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 133 DQNIAHRDVKPENLLYTKPG-DGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKK 191
++ H D+KP N+ ++ + D D +++ K+ D G +
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF---------KIGDLGHVTR 181
Query: 192 IVSNKASLQTPCYTPYYVAPEVLGPD-KYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
I +S Q ++A EVL + + DI++L + + + G P N Q
Sbjct: 182 I----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW- 235
Query: 251 SPGMKNRIRLGQFDFPNPEWEHV-SQEAKTLIKNMLCVDPSER 292
+ IR G+ P V SQE L+K M+ DP R
Sbjct: 236 -----HEIRQGRL----PRIPQVLSQEFTELLKVMIHPDPERR 269
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + G F + ++C + +L + ++ HRD+ N L
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCL 135
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ ++K++DFG + ++ ++ + T P
Sbjct: 136 V---------------------------GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ +PEV +Y D+WS GV+M+
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMW 195
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 87/320 (27%)
Query: 33 LQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENI-----YNGSRC 87
L+I KK S + ++H + RE+ L L H++++ + DV+ +N
Sbjct: 77 LKIAVKKLSRPFQ-SIIH-AKRTYRELRL-LKHMKHENVIGLLDVFTPATSLEEFNDVYL 133
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +M G +L ++ ++ T+ ++ +I +K++H +I HRD+KP NL
Sbjct: 134 VTHLM----GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 186
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + LK+ DFG A+ + T +
Sbjct: 187 VNEDCE---------------------------LKILDFGLARH---TDDEMTGYVATRW 216
Query: 208 YVAPEV-LGPDKYDKSCDIWSLGVIMYILLCG---FPPFFSNH---------------GQ 248
Y APE+ L Y+ + DIWS+G IM LL G FP ++H
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG--TDHINQLQQIMRLTGTPPAS 274
Query: 249 AIS--------------PGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLT 294
IS P M R F NP A L++ ML +D +R+T
Sbjct: 275 VISRMPSHEARNYINSLPQMPKRNFADVFIGANP-------LAVDLLEKMLVLDTDKRIT 327
Query: 295 IDQVMENKWISQFNQVPQTP 314
+ + + + SQ++ P
Sbjct: 328 ASEALAHPYFSQYHDPDDEP 347
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 125/307 (40%), Gaps = 66/307 (21%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 103 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKP-ENLLYTKP 175
++ +++L Q HRD+ N+L T + ++K+ DFG + N+ Y K
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKN 215
Query: 176 GDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-I 234
G L + ++APE L Y D+WS GV+M+ I
Sbjct: 216 TTNGRLPVK-----------------------WMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 235 LLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLT 294
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 253 FTLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPT 305
Query: 295 IDQVMEN 301
Q++E+
Sbjct: 306 FKQLVED 312
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+E G L + ++ + + T ++
Sbjct: 103 IINLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDXXKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ + +G L VI+E G L + ++ + + T ++
Sbjct: 103 IINL--LGACTQDGP--LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDXXKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 34/153 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGA---FTEREAAIIMNEICSAIKFLHDQN--IAHRDVK 142
L ++ E + G L++ + + GA ER + ++ + +LH++N I HRD+K
Sbjct: 109 LSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLK 166
Query: 143 PENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTP 202
NLL K YT +K+ DFG ++ S +
Sbjct: 167 SPNLLVDKK--------------------YT-------VKVCDFGLSRLKASXFLXSKXA 199
Query: 203 CYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYIL 235
TP ++APEVL + ++ D++S GVI++ L
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 72/257 (28%)
Query: 24 LGLGINGKVLQIV------EKKTSEVYALKVLHDTVKA------RREVELQLAVGSHKHI 71
LG G GKV++ E +V A+K+L T A E+++ +G H++I
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGEL-FQRIQQ------------------KEDGAF 112
VN+ +G L++ C +G L F R + KEDG
Sbjct: 98 VNLLGA---CTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 113 TE-REAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
E R+ +++ + FL +N HRDV N+L T
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---------------------- 192
Query: 172 YTKPGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIW 226
+G + K+ DFG A+ I+++ K + + P ++APE + Y D+W
Sbjct: 193 -----NGHVAKIGDFGLARDIMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVW 244
Query: 227 SLGVIMY-ILLCGFPPF 242
S G++++ I G P+
Sbjct: 245 SYGILLWEIFSLGLNPY 261
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 64 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 121
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 122 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 178 HSDLKPANFLIVD----------------------------GMLKLIDFGIANQMQPDTT 209
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + T Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 270 IINQISKLHAIIDPNH-------EIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 317
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 318 LLAHPYV-QIQTHPVNQMAKG 337
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 64 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 121
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 122 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 178 HSDLKPANFLIV----------------------------DGMLKLIDFGIANQMQPDTT 209
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + T Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 270 IINQISKLHAIIDPNH-------EIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 317
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 318 LLAHPYV-QIQTHPVNQMAKG 337
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +++E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEXTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 43/238 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQLAVGSHK- 69
D Y+I + ++G G G+V++ ++ E A+K++ + +A+ EV L + H
Sbjct: 54 DRYEIDS-LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 70 ----HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+IV++K + ++ CL+ M + +L + + R+ A ++C
Sbjct: 113 EMKYYIVHLKRHF--MFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFA---QQMC 167
Query: 126 SAIKFLHDQNIAHRDVKPE-NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+A+ FL PE ++++ D+KPEN+L P I K+
Sbjct: 168 TALLFL---------ATPELSIIHC--------------DLKPENILLCNPKRSAI-KIV 203
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
DFG + ++ + + +Y +PEVL YD + D+WSLG I+ + G P F
Sbjct: 204 DFGSSCQL---GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 127/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+++ +G L VI+E G L + ++ + + T ++
Sbjct: 103 IIHLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+ G L + ++ + + T ++
Sbjct: 103 IINLLGACTQ--DGP--LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ME M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 87 IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 43/238 (18%)
Query: 15 DDYDISTEILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQLAVGSHK- 69
D Y+I + ++G G G+V++ ++ E A+K++ + +A+ EV L + H
Sbjct: 35 DRYEIDS-LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 70 ----HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+IV++K + ++ CL+ M + +L + + R+ A ++C
Sbjct: 94 EMKYYIVHLKRHF--MFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFA---QQMC 148
Query: 126 SAIKFLHDQNIAHRDVKPE-NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+A+ FL PE ++++ D+KPEN+L P I K+
Sbjct: 149 TALLFL---------ATPELSIIHC--------------DLKPENILLCNPKRSAI-KIV 184
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF 242
DFG + ++ + + +Y +PEVL YD + D+WSLG I+ + G P F
Sbjct: 185 DFGSSCQL---GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 239
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 36 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 93
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 94 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 150 HSDLKPANFLIV----------------------------DGMLKLIDFGIANQMQPDTT 181
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + T Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 242 IINQISKLHAIIDPN-------HEIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 289
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 290 LLAHPYV-QIQTHPVNQMAKG 309
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 45/231 (19%)
Query: 14 QDDYDISTEILGLGINGKVLQIV---EKKTSEVYALKVL-HDTVKARREVELQLAVGSHK 69
+D+ I+ LG G G V Q V KK +V A+KVL T KA E ++ A H+
Sbjct: 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQ 66
Query: 70 ----HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+IV + V + + L+++ME GG L + + K + A +++++
Sbjct: 67 LDNPYIVRLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVS 120
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+K+L ++N HRD+ N+L N Y K++D
Sbjct: 121 MGMKYLEEKNFVHRDLAARNVLLV-------------------NRHYA--------KISD 153
Query: 186 FGFAKKIVSNKASLQTPCYTPY---YVAPEVLGPDKYDKSCDIWSLGVIMY 233
FG +K + ++ + + + APE + K+ D+WS GV M+
Sbjct: 154 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 204
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+ + +G L VI+E G L + ++ + + T ++
Sbjct: 103 IITLLGACTQ--DGP--LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 56 RREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER 115
+RE+++ A+ S IV + V + G + L ++ME + G L + Q+
Sbjct: 59 QREIQILKALHS-DFIVKYRGV--SYGPGRQSLRLVMEYLPSGCL-RDFLQRHRARLDAS 114
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
+ ++IC +++L + HRD+ N+L V+ E
Sbjct: 115 RLLLYSSQICKGMEYLGSRRCVHRDLAARNIL-----------------VESE------- 150
Query: 176 GDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YYVAPEVLGPDKYDKSCDIWSLGVIM 232
+K+ DFG AK + +K ++ P +P ++ APE L + + + D+WS GV++
Sbjct: 151 ---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 207
Query: 233 YILL 236
Y L
Sbjct: 208 YELF 211
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 17 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 74
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 75 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 130
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 131 HSDLKPANFLIV----------------------------DGMLKLIDFGIANQMQPDTT 162
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + T Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 223 IINQISKLHAIIDPNH-------EIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 270
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 271 LLAHPYV-QIQTHPVNQMAKG 290
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + G F + ++C + +L + + HRD+ N L
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL 135
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ ++K++DFG + ++ ++ + T P
Sbjct: 136 V---------------------------GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ +PEV +Y D+WS GV+M+
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMW 195
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 20 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 77
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 78 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 133
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 134 HSDLKPANFLIV----------------------------DGMLKLIDFGIANQMQPDTT 165
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + T Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 226 IINQISKLHAIIDPN-------HEIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 273
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 274 LLAHPYV-QIQTHPVNQMAKG 293
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +++E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + G F + ++C + +L + + HRD+ N L
Sbjct: 75 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL 133
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ ++K++DFG + ++ ++ + T P
Sbjct: 134 V---------------------------GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 166
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ +PEV +Y D+WS GV+M+
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMW 193
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 16 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 73
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 74 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 130 HSDLKPANFLIVD----------------------------GMLKLIDFGIANQMQPDTT 161
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + T Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 162 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 222 IINQISKLHAIIDPN-------HEIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 269
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 270 LLAHPYV-QIQTHPVNQMAKG 289
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + G F + ++C + +L + + HRD+ N L
Sbjct: 80 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL 138
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ ++K++DFG + ++ ++ + T P
Sbjct: 139 V---------------------------GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 171
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ +PEV +Y D+WS GV+M+
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMW 198
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 56 RREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER 115
+RE+++ A+ S IV + V + G + L ++ME + G L + Q+
Sbjct: 72 QREIQILKALHS-DFIVKYRGV--SYGPGRQSLRLVMEYLPSGCL-RDFLQRHRARLDAS 127
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
+ ++IC +++L + HRD+ N+L V+ E
Sbjct: 128 RLLLYSSQICKGMEYLGSRRCVHRDLAARNIL-----------------VESE------- 163
Query: 176 GDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YYVAPEVLGPDKYDKSCDIWSLGVIM 232
+K+ DFG AK + +K ++ P +P ++ APE L + + + D+WS GV++
Sbjct: 164 ---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220
Query: 233 YILL 236
Y L
Sbjct: 221 YELF 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L++V+ + A + ++ R V + L +G Y L +
Sbjct: 64 KILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG---------------YMTKDNLAI 108
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L++ + +E F + I + + +LH +NI HRD+K N+
Sbjct: 109 VTQWCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH- 166
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
+G +K+ DFG A K S ++ P + +
Sbjct: 167 --------------------------EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + + D++S G+++Y L+ G P+
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + G F + ++C + +L + + HRD+ N L
Sbjct: 97 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL 155
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ ++K++DFG + ++ ++ + T P
Sbjct: 156 V---------------------------GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 188
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ +PEV +Y D+WS GV+M+
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMW 215
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 56 RREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER 115
+RE+++ A+ S IV + V + G + L ++ME + G L + Q+
Sbjct: 60 QREIQILKALHS-DFIVKYRGV--SYGPGRQSLRLVMEYLPSGCL-RDFLQRHRARLDAS 115
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
+ ++IC +++L + HRD+ N+L V+ E
Sbjct: 116 RLLLYSSQICKGMEYLGSRRCVHRDLAARNIL-----------------VESE------- 151
Query: 176 GDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YYVAPEVLGPDKYDKSCDIWSLGVIM 232
+K+ DFG AK + +K ++ P +P ++ APE L + + + D+WS GV++
Sbjct: 152 ---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 208
Query: 233 YILL 236
Y L
Sbjct: 209 YELF 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 144 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 176
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 150 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 224
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 148 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 222
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 143 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 175
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 217
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 142 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 64/306 (20%)
Query: 24 LGLGINGKVLQI----VEK---KTSEVYALKVLHDTVKAR------REVELQLAVGSHKH 70
LG G G+V+ ++K K + A+K+L D + E+E+ +G HK+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------------DGAFTERE 116
I+N+ +G L VI+ G L + ++ + + T ++
Sbjct: 103 IINLLGACTQ--DGP--LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 117 AAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPG 176
++ +++L Q HRD+ N+L T + ++K+ DFG +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLAR---------- 205
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+ + + KK + + ++ ++APE L Y D+WS GV+M+ I
Sbjct: 206 -----DINNIDYYKKTTNGRLPVK-------WMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTI 295
G P+ + + +K R+ D P + + E ++++ PS+R T
Sbjct: 254 TLGGSPYPGIPVEELFKLLKEGHRM---DKP----ANCTNELYMMMRDCWHAVPSQRPTF 306
Query: 296 DQVMEN 301
Q++E+
Sbjct: 307 KQLVED 312
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 142 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 216
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 29/147 (19%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + G F + ++C + +L + + HRD+ N L
Sbjct: 78 ICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL 136
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ ++K++DFG + ++ ++ + T P
Sbjct: 137 V---------------------------GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 169
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ +PEV +Y D+WS GV+M+
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMW 196
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 52/219 (23%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-EICSAIKFLHDQNIAHRDVKPENL 146
+ ++ E M+ G L ++ E G + + M+ +I S + ++ N HRD++ N+
Sbjct: 84 IYIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANI 142
Query: 147 LYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTP 206
L G+ + K+ DFG A+ I N+ + + P
Sbjct: 143 LV---------------------------GENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 207 Y-YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ--- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVER 227
Query: 263 -FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 228 GYRMPCPP------ECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 151 VS---------------------------DTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 52/219 (23%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-EICSAIKFLHDQNIAHRDVKPENL 146
+ ++ E M+ G L ++ E G + + M+ +I S + ++ N HRD++ N+
Sbjct: 84 IYIVTEYMNKGSLLDFLK-GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANI 142
Query: 147 LYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTP 206
L G+ + K+ DFG A+ I N+ + + P
Sbjct: 143 LV---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 207 Y-YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ--- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVER 227
Query: 263 -FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 228 GYRMPCPP------ECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 127/311 (40%), Gaps = 53/311 (17%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 36 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 93
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 94 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPGDGGILKLTDFGFAKKIVS 194
H D+KP N L G+LKL DFG ++P+ K G + K + S
Sbjct: 150 HSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 195 NKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPF------FSNHGQ 248
++ + ++ D+WSLG I+Y + G PF S
Sbjct: 206 SRENGKSKSKI--------------SPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251
Query: 249 AISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQF 307
I P + +FP+ PE ++ + ++K L DP +R++I +++ + ++ Q
Sbjct: 252 IIDPN-------HEIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPELLAHPYV-QI 298
Query: 308 NQVPQTPLCTG 318
P + G
Sbjct: 299 QTHPVNQMAKG 309
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 30/146 (20%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
L ++ E M G L ++ + ++C A+++L N HRD+ N+L
Sbjct: 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 134
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + + K++DFG K+ S + + + P
Sbjct: 135 VS---------------------------EDNVAKVSDFGLTKEASSTQDTGKLPVK--- 164
Query: 208 YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ APE L K+ D+WS G++++
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLW 190
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 78 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 137
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 138 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 170
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 222
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 223 YRMPCP------PECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 30/146 (20%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
L ++ E M G L ++ + ++C A+++L N HRD+ N+L
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 321
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + + K++DFG K+ S + + + P
Sbjct: 322 VS---------------------------EDNVAKVSDFGLTKEASSTQDTGKLPVK--- 351
Query: 208 YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ APE L K+ D+WS G++++
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLW 377
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 187
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 188 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 225
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 226 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 278
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 279 DCWHAVPSQRPTFKQLVED 297
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 30/146 (20%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
L ++ E M G L ++ + ++C A+++L N HRD+ N+L
Sbjct: 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 149
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + + K++DFG K+ S + + + P
Sbjct: 150 VS---------------------------EDNVAKVSDFGLTKEASSTQDTGKLPVK--- 179
Query: 208 YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ APE L K+ D+WS G++++
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLW 205
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 195
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 196 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 233
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 286
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 287 DCWHAVPSQRPTFKQLVED 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 184
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 185 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 222
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 223 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 275
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 276 DCWHAVPSQRPTFKQLVED 294
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 90/234 (38%), Gaps = 43/234 (18%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ E + +I + F+ +N HRD++ N+L
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + K+ DFG A+ I N+ + + P
Sbjct: 317 VSA---------------------------SLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGV-IMYILLCGFPPFFSNHGQAISPGMKNR--IRLGQF 263
+ APE + + D+WS G+ +M I+ G P+ PGM N IR +
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY---------PGMSNPEVIRALER 400
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLT---IDQVMENKWISQFNQVPQTP 314
+ P E+ +E ++ P ER T I V+++ + + +Q + P
Sbjct: 401 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEEIP 454
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 180
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 181 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 218
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 271
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 272 DCWHAVPSQRPTFKQLVED 290
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 148 VS---------------------------DTLSCKIADFGLARLIEDNEYTAREGAKFPI 180
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 222
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 147 VS---------------------------DTLSCKIADFGLARLIEDNEYTAREGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 221
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 76 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 135
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 136 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 168
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 220
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 221 YRMPCP------PECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 142 VS---------------------------DTLSCKIADFGLARLIEDNEYTAREGAKFPI 174
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 216
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 188
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 189 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 226
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 227 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 279
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 280 DCWHAVPSQRPTFKQLVED 298
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 152 VS---------------------------DTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 226
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 195
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 196 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 233
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 286
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 287 DCWHAVPSQRPTFKQLVED 305
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 137 VS---------------------------DTLSCKIADFGLARLIEDNEYTAREGAKFPI 169
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 211
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 87 IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ +G L VI+E G L + +Q +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQ--DGP--LYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 236
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + + KK + + ++ ++APE L Y
Sbjct: 237 LAR---------------DIHHIDYYKKTTNGRLPVK-------WMAPEALFDRIYTHQS 274
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 327
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 328 DCWHAVPSQRPTFKQLVED 346
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
TE+ I+ + KF+H+ I HRD+KP N L + +K+ DFG L
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS---VKICDFG------LA 178
Query: 172 YTKPGDGGILKLTDFGFAKKIV-------SNKASLQTPCYTPYYVAPE-VLGPDKYDKSC 223
T D I + D ++ + K L + T +Y APE +L + Y S
Sbjct: 179 RTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSI 238
Query: 224 DIWSLGVIMYILL 236
DIWS G I LL
Sbjct: 239 DIWSTGCIFAELL 251
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 83 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 140
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 141 NVL-----------------------LVTQH----YAKISDFGLSKALRADENXYKAQTH 173
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 233
Query: 261 G 261
G
Sbjct: 234 G 234
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 125/321 (38%), Gaps = 73/321 (22%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLH------DTVKARREVELQLAVGSHKHIVNIKDV 77
+G G + KV Q++ +K ++YA+K ++ T+ + R E+ +H I +
Sbjct: 64 IGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRN-EIAYLNKLQQHSDKIIRL 121
Query: 78 YENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIA 137
Y+ + + ++MEC G + K+ + E + A+ +H I
Sbjct: 122 YDYEIT-DQYIYMVMEC---GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
H D+KP N L G+LKL DFG A ++ +
Sbjct: 178 HSDLKPANFLIVD----------------------------GMLKLIDFGIANQMQPDTT 209
Query: 198 SL--QTPCYTPYYVAPEVLGPDKYDKS-----------CDIWSLGVIMYILLCGFPPF-- 242
S+ + Y+ PE + + D+WSLG I+Y + G PF
Sbjct: 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
Query: 243 ----FSNHGQAISPGMKNRIRLGQFDFPN-PEWEHVSQEAKTLIKNMLCVDPSERLTIDQ 297
S I P + +FP+ PE ++ + ++K L DP +R++I +
Sbjct: 270 IINQISKLHAIIDPNH-------EIEFPDIPE-----KDLQDVLKCCLKRDPKQRISIPE 317
Query: 298 VMENKWISQFNQVPQTPLCTG 318
++ + ++ Q P + G
Sbjct: 318 LLAHPYV-QIQTHPVNQMAKG 337
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 77 IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 136
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 137 V---------------------------GENLVCKVADFGLARLIEDNEXTARQGAKFPI 169
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 221
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 222 YRMPCP------PECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 33 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R ++ME M GG+L +++ A+ + +I
Sbjct: 92 HQNIVRCIGVSLQSLPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 185
Query: 185 DFGFAKKIVSNKASLQTPCYT-PY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C P ++ PE + D WS GV+++ I G+ P
Sbjct: 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 246 YPSKSNQEV 254
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 77 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 134
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 135 NVL-----------------------LVTQH----YAKISDFGLSKALRADENYYKAQTH 167
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 227
Query: 261 G 261
G
Sbjct: 228 G 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 89 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 146
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 147 NVL-----------------------LVTQH----YAKISDFGLSKALRADENYYKAQTH 179
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 239
Query: 261 G 261
G
Sbjct: 240 G 240
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 79 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 136
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 137 NVL-----------------------LVTQH----YAKISDFGLSKALRADENYYKAQTH 169
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 229
Query: 261 G 261
G
Sbjct: 230 G 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 52/219 (23%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-EICSAIKFLHDQNIAHRDVKPENL 146
+ ++ E M G L ++ E G + + M +I S + ++ N HRD++ N+
Sbjct: 253 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 147 LYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTP 206
L G+ + K+ DFG A+ I N+ + + P
Sbjct: 312 LV---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 207 Y-YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ--- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVER 396
Query: 263 -FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 397 GYRMPCPP------ECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 99 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 156
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 157 NVL-----------------------LVTQ----HYAKISDFGLSKALRADENYYKAQTH 189
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 249
Query: 261 G 261
G
Sbjct: 250 G 250
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 99 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 156
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 157 NVL-----------------------LVTQ----HYAKISDFGLSKALRADENYYKAQTH 189
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 249
Query: 261 G 261
G
Sbjct: 250 G 250
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 97 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 154
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 155 NVL-----------------------LVTQ----HYAKISDFGLSKALRADENYYKAQTH 187
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 247
Query: 261 G 261
G
Sbjct: 248 G 248
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 83 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 140
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 141 NVL-----------------------LVTQH----YAKISDFGLSKALRADENYYKAQTH 173
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 233
Query: 261 G 261
G
Sbjct: 234 G 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 48 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 106
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R ++ME M GG+L +++ A+ + +I
Sbjct: 107 HQNIVRCIGVSLQSLPR--FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 200
Query: 185 DFGFAKKIVSNKASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C ++ PE + D WS GV+++ I G+ P
Sbjct: 201 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 261 YPSKSNQEV 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 52/219 (23%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-EICSAIKFLHDQNIAHRDVKPENL 146
+ ++ E M G L ++ E G + + M +I S + ++ N HRD++ N+
Sbjct: 253 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 147 LYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTP 206
L G+ + K+ DFG A+ I N+ + + P
Sbjct: 312 LV---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 207 Y-YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ--- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVER 396
Query: 263 -FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 397 GYRMPCPP------ECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 441 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 498
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 499 NVL-----------------------LVTQ----HYAKISDFGLSKALRADENYYKAQTH 531
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 591
Query: 261 G 261
G
Sbjct: 592 G 592
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 97/253 (38%), Gaps = 68/253 (26%)
Query: 54 KARREVELQL-AVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF 112
K R E +QL AV S + I + + Y CLL ++ G L R+ Q D A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVTE-----YMSKGCLLDFLKGEMGKYL--RLPQLVDMA- 120
Query: 113 TEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLY 172
+I S + ++ N HRD++ N+L
Sbjct: 121 ---------AQIASGMAYVERMNYVHRDLRAANILV------------------------ 147
Query: 173 TKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVI 231
G+ + K+ DFG A+ I N+ + + P + APE ++ D+WS G++
Sbjct: 148 ---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 232 MYILLCGFPPFFSNHGQAISPGMKNRIRLGQ----FDFPNPEWEHVSQEAKTLIKNMLCV 287
+ L + G+ PGM NR L Q + P P E + +++C
Sbjct: 205 LTEL--------TTKGRVPYPGMVNREVLDQVERGYRMPCPP------ECPESLHDLMCQ 250
Query: 288 ----DPSERLTID 296
DP ER T +
Sbjct: 251 CWRKDPEERPTFE 263
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 85 SRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPE 144
+ +++ME G L + +QQ ++ +++++ +K+L + N HRD+
Sbjct: 442 AESWMLVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR 499
Query: 145 NLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCY 204
N+L L T+ K++DFG +K + +++ + +
Sbjct: 500 NVL-----------------------LVTQ----HYAKISDFGLSKALRADENYYKAQTH 532
Query: 205 TPY---YVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
+ + APE + K+ D+WS GV+M+ G P+ G ++ ++ R+
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 592
Query: 261 G 261
G
Sbjct: 593 G 593
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 38/214 (17%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ E + +I + F+ +N HRD++ N+L
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + K+ DFG A+ I N+ + + P
Sbjct: 144 VSA---------------------------SLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNR--IRLGQFD 264
+ APE + + D+WS G+++ ++ +G+ PGM N IR +
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIV--------TYGRIPYPGMSNPEVIRALERG 228
Query: 265 FPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQV 298
+ P E+ +E ++ P ER T + +
Sbjct: 229 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYI 262
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 124/312 (39%), Gaps = 84/312 (26%)
Query: 22 EILGLGINGKVLQIVEKKTSEV-----YALKVLHDTVKARR------EVELQLAVGSHKH 70
++LG G GKV+ S+ A+K+L + + E+++ +GSH++
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 71 IVNIKDVYENIYNGSRCLLVIMECMHGGELF--------------------QRIQQKED- 109
IVN+ S + +I E G+L +R++++ED
Sbjct: 111 IVNLLGAC----TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 110 GAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPEN 169
T + ++ ++FL ++ HRD+ N+L T
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH------------------- 207
Query: 170 LLYTKPGDGGILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCD 224
G ++K+ DFG A+ I+S+ + + + P ++APE L Y D
Sbjct: 208 --------GKVVKICDFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSD 256
Query: 225 IWSLGVIMY-ILLCGFPPFFSNHGQAISPGM---KNRIRLGQFDFPNPEWEHVSQEAKTL 280
+WS G++++ I G P+ PG+ N +L Q F + + ++E +
Sbjct: 257 VWSYGILLWEIFSLGVNPY---------PGIPVDANFYKLIQNGFKMDQPFYATEEIYII 307
Query: 281 IKNMLCVDPSER 292
+++ D +R
Sbjct: 308 MQSCWAFDSRKR 319
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 45/231 (19%)
Query: 14 QDDYDISTEILGLGINGKVLQIV---EKKTSEVYALKVL-HDTVKARREVELQLAVGSHK 69
+D+ I+ LG G G V Q V KK +V A+KVL T KA E ++ A H+
Sbjct: 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQ 392
Query: 70 ----HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEIC 125
+IV + V + + L+++ME GG L + + K + A +++++
Sbjct: 393 LDNPYIVRLIGVCQ-----AEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVS 446
Query: 126 SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTD 185
+K+L ++N HR++ N+L N Y K ++D
Sbjct: 447 MGMKYLEEKNFVHRNLAARNVLLV-------------------NRHYAK--------ISD 479
Query: 186 FGFAKKIVSNKASLQTPCYTPY---YVAPEVLGPDKYDKSCDIWSLGVIMY 233
FG +K + ++ + + + APE + K+ D+WS GV M+
Sbjct: 480 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 530
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 80 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 139
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 140 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 172
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 224
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 225 YRMPCP------PECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 82/218 (37%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD+ N+L
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANIL 146
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG A+ I N+ + + P
Sbjct: 147 V---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 231
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 232 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 31/152 (20%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
L ++ME + G L + Q+ + ++IC +++L + HRD+ N+L
Sbjct: 85 LRLVMEYLPSGCL-RDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK--ASLQTPCYT 205
+K+ DFG AK + +K ++ P +
Sbjct: 144 VESEAH---------------------------VKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 206 P-YYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
P ++ APE L + + + D+WS GV++Y L
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 102/262 (38%), Gaps = 57/262 (21%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLL 171
TE I+ + F+H+ I HRD+KP N L + +K+ DFG + N
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCS---VKVCDFGLARTINSE 182
Query: 172 YTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPE-VLGPDKYDKSCDIWSLGV 230
+ + + G K + K L + T +Y APE +L + Y KS DIWS G
Sbjct: 183 KDTNIVNDLEENEEPGPHNKNL--KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240
Query: 231 IMYILL-----------CGFPPFFSNHGQAISPGM--------KNRIRLG---------- 261
I LL FP F + +SP NR +L
Sbjct: 241 IFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPT 300
Query: 262 QFDFPN---PE-------------------WEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
+ D N PE + +S + L+++ML +P++R+TIDQ +
Sbjct: 301 EDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQAL 360
Query: 300 ENKWISQFNQVPQTPLCTGKML 321
++ ++ + T K++
Sbjct: 361 DHPYLKDVRKKKLENFSTKKII 382
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 82/218 (37%), Gaps = 50/218 (22%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ ++ E M G L ++ + + + +I S + ++ N HRD++ N+L
Sbjct: 254 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 313
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
G+ + K+ DFG + I N+ + + P
Sbjct: 314 V---------------------------GENLVCKVADFGLGRLIEDNEYTARQGAKFPI 346
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ---- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVERG 398
Query: 263 FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C DP ER T +
Sbjct: 399 YRMPCPP------ECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 52/219 (23%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-EICSAIKFLHDQNIAHRDVKPENL 146
+ ++ E M G L ++ E G + + M +I S + ++ N HRD++ N+
Sbjct: 336 IYIVTEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 394
Query: 147 LYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTP 206
L ENL + K+ DFG A+ I N+ + + P
Sbjct: 395 LVG------------------ENL---------VCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 207 Y-YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ--- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVER 479
Query: 263 -FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 480 GYRMPCPP------ECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 89/232 (38%), Gaps = 39/232 (16%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ E G + +I + ++ +N HRD++ N+L
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 142
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ E+L+ K+ DFG A+ I N+ + + P
Sbjct: 143 VS------------------ESLM---------CKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDF 265
+ APE + + D+WS G+++Y I+ G P+ + + R+
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM----- 230
Query: 266 PNPEWEHVSQEAKTLIKNMLCVDPSERLTID---QVMENKWISQFNQVPQTP 314
P E+ E ++K ER T D V+++ + + Q Q P
Sbjct: 231 --PRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP 280
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 40/237 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENI 81
++ G+ + LQ+ K EVY+ + D + E L ++ +H++IV V ++
Sbjct: 65 QVSGMPNDPSPLQVAVKTLPEVYSEQ---DELDFLMEA-LIISKFNHQNIVRCIGV--SL 118
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEICSAIKFLHDQNI 136
+ R +++E M GG+L +++ A+ + +I ++L + +
Sbjct: 119 QSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 176
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+ N L T P G G + K+ DFG A+ I
Sbjct: 177 IHRDIAARNCLLTCP------------------------GPGRVAKIGDFGMARDIYRAS 212
Query: 197 ASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQAI 250
+ C ++ PE + D WS GV+++ I G+ P+ S Q +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 121/300 (40%), Gaps = 70/300 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQ---IVEKKTSEVYALKVLHD-TVKARREVELQLAV 65
DY+I E +G G G V Q + + + A+K + T + RE LQ A+
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 66 G----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII 120
H HIV I + EN + +IME GEL +Q ++ F+ A++I
Sbjct: 64 TMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---FSLDLASLI 114
Query: 121 MN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ +A+ +L + HRD+ N+L +
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVS---------------------------SN 147
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILL 236
+KL DFG ++ + + + P ++APE + ++ + D+W GV M+ IL+
Sbjct: 148 DCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 237 CGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSER 292
G PF G+KN +G+ + P P + +L+ DPS R
Sbjct: 208 HGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQ-LAVGSHKHIVNIKD 76
E +G G G+V + + + A+K +T+ KA+ E + L SH +IV +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V + + ++ME + GG+ F + E + ++ + + +++L +
Sbjct: 180 VCTQ----KQPIYIVMELVQGGD-FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+ N L T + +LK++DFG + E A + +
Sbjct: 235 IHRDLAARNCLVT---EKNVLKISDFGMSREE--------------------ADGVXAAS 271
Query: 197 ASL-QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
L Q P + APE L +Y D+WS G++++
Sbjct: 272 GGLRQVPVK---WTAPEALNYGRYSSESDVWSFGILLW 306
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 52/219 (23%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN-EICSAIKFLHDQNIAHRDVKPENL 146
+ ++ E M G L ++ E G + + M +I S + ++ N HRD++ N+
Sbjct: 253 IYIVGEYMSKGSLLDFLK-GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANI 311
Query: 147 LYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTP 206
L G+ + K+ DFG A+ I N+ + + P
Sbjct: 312 LV---------------------------GENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 207 Y-YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQ--- 262
+ APE ++ D+WS G+++ L + G+ PGM NR L Q
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTEL--------TTKGRVPYPGMVNREVLDQVER 396
Query: 263 -FDFPNPEWEHVSQEAKTLIKNMLCV----DPSERLTID 296
+ P P E + +++C +P ER T +
Sbjct: 397 GYRMPCPP------ECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 42/227 (18%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H HIV + + E +IME GEL +++ ++ + + +IC A
Sbjct: 72 HPHIVKLIGIIEE-----EPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKA 125
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +L N HRD+ N+L P +KL DFG
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPE---------------------------CVKLGDFG 158
Query: 188 FAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSN 245
++ I + P +++PE + ++ + D+W V M+ IL G PFF
Sbjct: 159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSER 292
+ + ++ RL + D P TL+ DPS+R
Sbjct: 219 ENKDVIGVLEKGDRLPKPDLCPP-------VLYTLMTRCWDYDPSDR 258
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 37/218 (16%)
Query: 22 EILGLGINGKVLQIVEKKTSEVYALKVLHDTV----KARREVELQ-LAVGSHKHIVNIKD 76
E +G G G+V + + + A+K +T+ KA+ E + L SH +IV +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 77 VYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNI 136
V + + ++ME + GG+ F + E + ++ + + +++L +
Sbjct: 180 VCTQ----KQPIYIVMELVQGGD-FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRD+ N L T + +LK++DFG + E A + +
Sbjct: 235 IHRDLAARNCLVT---EKNVLKISDFGMSREE--------------------ADGVYAAS 271
Query: 197 ASL-QTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
L Q P + APE L +Y D+WS G++++
Sbjct: 272 GGLRQVPVK---WTAPEALNYGRYSSESDVWSFGILLW 306
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 42/227 (18%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H HIV + + E +IME GEL +++ ++ + + +IC A
Sbjct: 84 HPHIVKLIGIIEE-----EPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKA 137
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +L N HRD+ N+L P +KL DFG
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPE---------------------------CVKLGDFG 170
Query: 188 FAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSN 245
++ I + P +++PE + ++ + D+W V M+ IL G PFF
Sbjct: 171 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 230
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSER 292
+ + ++ RL + D P TL+ DPS+R
Sbjct: 231 ENKDVIGVLEKGDRLPKPDLCPP-------VLYTLMTRCWDYDPSDR 270
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HR+++ N+L
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I N+ + + P
Sbjct: 138 VS---------------------------DTLSCKIADFGLARLIEDNEYTAREGAKFPI 170
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 50 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 108
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 109 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 167 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 202
Query: 185 DFGFAKKIVSNKASLQTPCYT-PY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C P ++ PE + D WS GV+++ I G+ P
Sbjct: 203 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 263 YPSKSNQEV 271
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 30/146 (20%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
L ++ E M G L ++ + ++C A+++L N HRD+ N+L
Sbjct: 81 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 140
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + + K++DFG K+ S + + + P
Sbjct: 141 VS---------------------------EDNVAKVSDFGLTKEASSTQDTGKLPVK--- 170
Query: 208 YVAPEVLGPDKYDKSCDIWSLGVIMY 233
+ APE L + D+WS G++++
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLW 196
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 42/227 (18%)
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSA 127
H HIV + + E +IME GEL +++ ++ + + +IC A
Sbjct: 68 HPHIVKLIGIIE-----EEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKA 121
Query: 128 IKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFG 187
+ +L N HRD+ N+L P +KL DFG
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPE---------------------------CVKLGDFG 154
Query: 188 FAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSN 245
++ I + P +++PE + ++ + D+W V M+ IL G PFF
Sbjct: 155 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 214
Query: 246 HGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSER 292
+ + ++ RL + D P TL+ DPS+R
Sbjct: 215 ENKDVIGVLEKGDRLPKPDLCPP-------VLYTLMTRCWDYDPSDR 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 58 EVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKE--------- 108
E+E+ +G HK+I+N+ + +G L VI+E G L + +Q +
Sbjct: 83 EMEMMKMIGKHKNIINL--LGACTQDGP--LYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 109 -----DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG 163
+ + ++ ++ +++L + HRD+ N+L T + ++K+ DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFG 195
Query: 164 DVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ + KK + + ++ ++APE L Y
Sbjct: 196 LAR---------------DIHHIDXXKKTTNGRLPVK-------WMAPEALFDRIYTHQS 233
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIK 282
D+WS GV+++ I G P+ + + +K R+ D P+ + + E +++
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM---DKPS----NCTNELYMMMR 286
Query: 283 NMLCVDPSERLTIDQVMEN 301
+ PS+R T Q++E+
Sbjct: 287 DCWHAVPSQRPTFKQLVED 305
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 34 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 92
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 93 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 186
Query: 185 DFGFAKKIVSNKASLQTPCYT-PY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C P ++ PE + D WS GV+++ I G+ P
Sbjct: 187 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 247 YPSKSNQEV 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 40 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 98
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 99 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 157 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 192
Query: 185 DFGFAKKIVSNKASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C ++ PE + D WS GV+++ I G+ P
Sbjct: 193 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 253 YPSKSNQEV 261
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 33 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 91
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 92 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 185
Query: 185 DFGFAKKIVSNKASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C ++ PE + D WS GV+++ I G+ P
Sbjct: 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 246 YPSKSNQEV 254
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 60 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 118
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 119 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 177 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 212
Query: 185 DFGFAKKIVSNKASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C ++ PE + D WS GV+++ I G+ P
Sbjct: 213 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 273 YPSKSNQEV 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 25 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 83
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 84 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 142 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 177
Query: 185 DFGFAKKIVSNKASLQTPCYT-PY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C P ++ PE + D WS GV+++ I G+ P
Sbjct: 178 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 238 YPSKSNQEV 246
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 41/233 (17%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ E G + +I + ++ +N HRD++ N+L
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 141
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ E+L+ K+ DFG A+ I N+ + + P
Sbjct: 142 VS------------------ESLM---------CKIADFGLARVIEDNEYTAREGAKFPI 174
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFD-- 264
+ APE + + ++WS G+++Y ++ +G+ PG N +
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIV--------TYGKIPYPGRTNADVMSALSQG 226
Query: 265 FPNPEWEHVSQEAKTLIKNMLCVDPSERLTID---QVMENKWISQFNQVPQTP 314
+ P E+ E ++K ER T D V+++ + + Q Q P
Sbjct: 227 YRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQP 279
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 123/300 (41%), Gaps = 70/300 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQ---IVEKKTSEVYALKVLHD-TVKARREVELQLAV 65
DY+I E +G G G V Q + + + A+K + T + RE LQ A+
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 66 G----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII 120
H HIV I + EN + +IME GEL +Q ++ F+ A++I
Sbjct: 64 TMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---FSLDLASLI 114
Query: 121 MN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ +A+ +L + HRD+ N+L + TD
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSA---------TD----------------- 148
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILL 236
+KL DFG ++ + + + P ++APE + ++ + D+W GV M+ IL+
Sbjct: 149 -CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 237 CGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSER 292
G PF G+KN +G+ + P P + +L+ DPS R
Sbjct: 208 HGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSRR 256
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 32/170 (18%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEICSAIKFLHDQNIAHRDVKP 143
+++E M GG+L +++ A+ + +I ++L + + HRD+
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 144 ENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPC 203
N L T P G G + K+ DFG A+ I + C
Sbjct: 170 RNCLLTCP------------------------GPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 204 --YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQAI 250
++ PE + D WS GV+++ I G+ P+ S Q +
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 255
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 36/170 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ T + + +I + F+ ++N HRD++ N+L
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ D K+ DFG A+ I + + + P
Sbjct: 142 VS---------------------------DTLSCKIADFGLARLIEDAEXTAREGAKFPI 174
Query: 208 -YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKN 256
+ APE + + D+WS G+++ ++ HG+ PGM N
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIV--------THGRIPYPGMTN 216
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 51 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 109
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 110 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 168 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 203
Query: 185 DFGFAKKIVSNKASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C ++ PE + D WS GV+++ I G+ P
Sbjct: 204 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 264 YPSKSNQEV 272
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 34 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 92
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 93 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 151 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 186
Query: 185 DFGFAKKIVSNKASLQTPCYT-PY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C P ++ PE + D WS GV+++ I G+ P
Sbjct: 187 DFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 247 YPSKSNQEV 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 99/248 (39%), Gaps = 61/248 (24%)
Query: 24 LGLGINGKVL-----QIVEKKTSEVYALKVLHD-TVKAR----REVELQLAVGSHKHIVN 73
LG G GKV + K + A+K L D T+ AR RE EL L H+HIV
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL-LTNLQHEHIVK 81
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGEL--FQRIQ------------QKEDGAFTEREAAI 119
+ + L+++ E M G+L F R ++ G +
Sbjct: 82 ----FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPG 176
I ++I S + +L Q+ HRD+ N L G ++K+ DFG DV + Y + G
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLV---GANLLVKIGDFGMSRDVYSTD--YYRVG 192
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
+L + ++ PE + K+ D+WS GVI++ I
Sbjct: 193 GHTMLPIR-----------------------WMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 236 LCGFPPFF 243
G P+F
Sbjct: 230 TYGKQPWF 237
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 46/249 (18%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVEL---QLAVGSHK 69
T I GLG +G ++ E + S + A+K L + + E++ L +
Sbjct: 74 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN 132
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMNEI 124
H ++ + ++ + R +++E M GG+L +++ A+ + +I
Sbjct: 133 HQNIVRCIGVSLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
++L + + HRD+ N L T P G G + K+
Sbjct: 191 ACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAKIG 226
Query: 185 DFGFAKKIVSNKASLQTPCYT-PY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPP 241
DFG A+ I + C P ++ PE + D WS GV+++ I G+ P
Sbjct: 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
Query: 242 FFSNHGQAI 250
+ S Q +
Sbjct: 287 YPSKSNQEV 295
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 100/251 (39%), Gaps = 50/251 (19%)
Query: 21 TEILGLGINGKVLQIVEKKTSEV--------YALKVLHDTVKARREVE-----LQLAVGS 67
T I GLG +G ++ E + S + A+K L + + E++ L ++ +
Sbjct: 48 TLIRGLG-HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN 106
Query: 68 HKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI-----IMN 122
H++IV V ++ + R +++E M GG+L +++ A+ +
Sbjct: 107 HQNIVRCIGV--SLQSLPR--FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
+I ++L + + HRD+ N L T P G G + K
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLLTCP------------------------GPGRVAK 198
Query: 183 LTDFGFAKKIVSNKASLQTPC--YTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGF 239
+ DFG A+ I + C ++ PE + D WS GV+++ I G+
Sbjct: 199 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 258
Query: 240 PPFFSNHGQAI 250
P+ S Q +
Sbjct: 259 MPYPSKSNQEV 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 72/301 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-----ARREVELQLA 64
DY+I E +G G G V Q + + E AL V T K + RE LQ A
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 65 VG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI 119
+ H HIV I + EN + +IME GEL +Q ++ ++ A++
Sbjct: 91 LTMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASL 141
Query: 120 IMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPG 176
I+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 198
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
G K ++ ++APE + ++ + D+W GV M+ IL
Sbjct: 199 KG-----------------KLPIK-------WMAPESINFRRFTSASDVWMFGVCMWEIL 234
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+ G PF G+KN +G+ + P P + +L+ DPS
Sbjct: 235 MHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSR 283
Query: 292 R 292
R
Sbjct: 284 R 284
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 60/254 (23%)
Query: 52 TVKARREVELQLAVG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ 106
T + RE LQ A+ H HIV I + EN + +IME GEL +Q
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQV 483
Query: 107 KEDGAFTEREAAIIMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGD 164
++ F+ A++I+ ++ +A+ +L + HRD+ N+L + +KL DFG
Sbjct: 484 RK---FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGL 537
Query: 165 VK-PENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSC 223
+ E+ Y K G + ++APE + ++ +
Sbjct: 538 SRYMEDSTYYKASKGKL------------------------PIKWMAPESINFRRFTSAS 573
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAK 278
D+W GV M+ IL+ G PF G+KN +G+ + P P +
Sbjct: 574 DVWMFGVCMWEILMHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLY 622
Query: 279 TLIKNMLCVDPSER 292
+L+ DPS R
Sbjct: 623 SLMTKCWAYDPSRR 636
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 52 TVKARREVELQLAVG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQ 106
T + RE LQ A+ H HIV I + EN + +IME GEL +Q
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQV 483
Query: 107 KEDGAFTEREAAIIMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGD 164
++ F+ A++I+ ++ +A+ +L + HRD+ N+L + TD
Sbjct: 484 RK---FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSA---------TD--- 528
Query: 165 VKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSC 223
+KL DFG ++ + + + P ++APE + ++ +
Sbjct: 529 ---------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 573
Query: 224 DIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAK 278
D+W GV M+ IL+ G PF G+KN +G+ + P P +
Sbjct: 574 DVWMFGVCMWEILMHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLY 622
Query: 279 TLIKNMLCVDPSER 292
+L+ DPS R
Sbjct: 623 SLMTKCWAYDPSRR 636
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 72/301 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-----ARREVELQLA 64
DY+I E +G G G V Q + + E AL V T K + RE LQ A
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 65 VG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI 119
+ H HIV I + EN + +IME GEL +Q ++ ++ A++
Sbjct: 63 LTMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASL 113
Query: 120 IMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPG 176
I+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
G K ++ ++APE + ++ + D+W GV M+ IL
Sbjct: 171 KG-----------------KLPIK-------WMAPESINFRRFTSASDVWMFGVCMWEIL 206
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+ G PF G+KN +G+ + P P + +L+ DPS
Sbjct: 207 MHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSR 255
Query: 292 R 292
R
Sbjct: 256 R 256
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 124/318 (38%), Gaps = 78/318 (24%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIK---DVYEN 80
LG G G V ++ + ++ A+K + TV ++ + L + + V+ Y
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 81 IYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI--IMNEICSAIKFLHDQ-NIA 137
++ + + ME M L + +Q D T E + I I A++ LH + ++
Sbjct: 119 LFREGD-VWICMELMDTS-LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 138 HRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKA 197
HRDVKP N+L N L G +K+ DFG + +V + A
Sbjct: 177 HRDVKPSNVLI--------------------NAL-------GQVKMCDFGISGYLVDSVA 209
Query: 198 SLQTPCYTPYYVAPEVLGPD----KYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPG 253
PY +APE + P+ Y DIWSLG+ M
Sbjct: 210 KTIDAGCKPY-MAPERINPELNQKGYSVKSDIWSLGITM--------------------- 247
Query: 254 MKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQT 313
I L FP W Q+ K +++ +PS +L D K+ ++F V T
Sbjct: 248 ----IELAILRFPYDSWGTPFQQLKQVVE-----EPSPQLPAD-----KFSAEF--VDFT 291
Query: 314 PLCTGKMLKEGEETWPEV 331
C K KE T+PE+
Sbjct: 292 SQCLKKNSKE-RPTYPEL 308
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 72/301 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-----ARREVELQLA 64
DY+I E +G G G V Q + + E AL V T K + RE LQ A
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 65 VG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI 119
+ H HIV I + EN + +IME GEL +Q ++ ++ A++
Sbjct: 65 LTMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASL 115
Query: 120 IMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPG 176
I+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
G + ++APE + ++ + D+W GV M+ IL
Sbjct: 173 KGKL------------------------PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+ G PF G+KN +G+ + P P + +L+ DPS
Sbjct: 209 MHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSR 257
Query: 292 R 292
R
Sbjct: 258 R 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 72/301 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-----ARREVELQLA 64
DY+I E +G G G V Q + + E AL V T K + RE LQ A
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 65 VG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI 119
+ H HIV I + EN + +IME GEL +Q ++ ++ A++
Sbjct: 68 LTMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASL 118
Query: 120 IMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPG 176
I+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 175
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
G K ++ ++APE + ++ + D+W GV M+ IL
Sbjct: 176 KG-----------------KLPIK-------WMAPESINFRRFTSASDVWMFGVCMWEIL 211
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+ G PF G+KN +G+ + P P + +L+ DPS
Sbjct: 212 MHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSR 260
Query: 292 R 292
R
Sbjct: 261 R 261
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 72/301 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-----ARREVELQLA 64
DY+I E +G G G V Q + + E AL V T K + RE LQ A
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 65 VG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI 119
+ H HIV I + EN + +IME GEL +Q ++ ++ A++
Sbjct: 66 LTMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASL 116
Query: 120 IMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPG 176
I+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 173
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
G + ++APE + ++ + D+W GV M+ IL
Sbjct: 174 KGKL------------------------PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+ G PF G+KN +G+ + P P + +L+ DPS
Sbjct: 210 MHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSR 258
Query: 292 R 292
R
Sbjct: 259 R 259
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 72/301 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQIVEKKTSEVYALKVLHDTVK-----ARREVELQLA 64
DY+I E +G G G V Q + + E AL V T K + RE LQ A
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEA 59
Query: 65 VG----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAI 119
+ H HIV I + EN + +IME GEL +Q ++ ++ A++
Sbjct: 60 LTMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASL 110
Query: 120 IMN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPG 176
I+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 177 DGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-IL 235
G + ++APE + ++ + D+W GV M+ IL
Sbjct: 168 KGKL------------------------PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
Query: 236 LCGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSE 291
+ G PF G+KN +G+ + P P + +L+ DPS
Sbjct: 204 MHGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSR 252
Query: 292 R 292
R
Sbjct: 253 R 253
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 51 DTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG 110
+ ++ +E + ++ + S+ + NI +Y ++N R ++ + C G+L+ R+ K
Sbjct: 62 EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC---GDLYHRLLDKAHP 118
Query: 111 AFTEREAAIIMNEICSAIKFLHDQN--IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPE 168
+ ++++ I I+++ +QN I HRD++ N+ L + P
Sbjct: 119 IKWSVKLRLMLD-IALGIEYMQNQNPPIVHRDLRSPNIF-----------LQSLDENAPV 166
Query: 169 NLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK--YDKSCDIW 226
K+ DFG +++ V + + L ++APE +G ++ Y + D +
Sbjct: 167 -----------CAKVADFGLSQQSVHSVSGLLG---NFQWMAPETIGAEEESYTEKADTY 212
Query: 227 SLGVIMYILLCGFPPF 242
S +I+Y +L G PF
Sbjct: 213 SFAMILYTILTGEGPF 228
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 70/300 (23%)
Query: 16 DYDISTE------ILGLGINGKVLQ---IVEKKTSEVYALKVLHD-TVKARREVELQLAV 65
DY+I E +G G G V Q + + + A+K + T + RE LQ A+
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 66 G----SHKHIVN-IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAII 120
H HIV I + EN + +IME GEL +Q ++ ++ A++I
Sbjct: 64 TMRQFDHPHIVKLIGVITENP------VWIIMELCTLGELRSFLQVRK---YSLDLASLI 114
Query: 121 MN--EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK-PENLLYTKPGD 177
+ ++ +A+ +L + HRD+ N+L + +KL DFG + E+ Y K
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 178 GGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILL 236
G + ++APE + ++ + D+W GV M+ IL+
Sbjct: 172 GKL------------------------PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 237 CGFPPFFSNHGQAISPGMKNRIRLGQFD----FPNPEWEHVSQEAKTLIKNMLCVDPSER 292
G PF G+KN +G+ + P P + +L+ DPS R
Sbjct: 208 HGVKPF---------QGVKNNDVIGRIENGERLPMP--PNCPPTLYSLMTKCWAYDPSRR 256
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 48/259 (18%)
Query: 56 RREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER 115
++E+E+ L H++IV K + +G + +IME + G L + + + ++ ++
Sbjct: 71 KKEIEI-LRNLYHENIVKYKGICTE--DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 127
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
+ + +IC + +L + HRD+ N+L V+ E+ +
Sbjct: 128 QLKYAV-QICKGMDYLGSRQYVHRDLAARNVL-----------------VESEHQV---- 165
Query: 176 GDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YYVAPEVLGPDKYDKSCDIWSLGVIM 232
K+ DFG K I ++K +++ +P ++ APE L K+ + D+WS GV +
Sbjct: 166 ------KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219
Query: 233 YILLCGFPPFFS-----------NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLI 281
+ LL S HGQ + N ++ G+ P P + E L+
Sbjct: 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK-RLPCP--PNCPDEVYQLM 276
Query: 282 KNMLCVDPSERLTIDQVME 300
+ PS R + ++E
Sbjct: 277 RKCWEFQPSNRTSFQNLIE 295
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 48/259 (18%)
Query: 56 RREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTER 115
++E+E+ L H++IV K + +G + +IME + G L + + + ++ ++
Sbjct: 59 KKEIEI-LRNLYHENIVKYKGICTE--DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQ 115
Query: 116 EAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKP 175
+ + +IC + +L + HRD+ N+L V+ E+ +
Sbjct: 116 QLKYAV-QICKGMDYLGSRQYVHRDLAARNVL-----------------VESEHQV---- 153
Query: 176 GDGGILKLTDFGFAKKIVSNK--ASLQTPCYTP-YYVAPEVLGPDKYDKSCDIWSLGVIM 232
K+ DFG K I ++K +++ +P ++ APE L K+ + D+WS GV +
Sbjct: 154 ------KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 207
Query: 233 YILLCGFPPFFS-----------NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLI 281
+ LL S HGQ + N ++ G+ P P + E L+
Sbjct: 208 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK-RLPCP--PNCPDEVYQLM 264
Query: 282 KNMLCVDPSERLTIDQVME 300
+ PS R + ++E
Sbjct: 265 RKCWEFQPSNRTSFQNLIE 283
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 24 LGLGINGKVL-----QIVEKKTSEVYALKVLHDTVKA-----RREVELQLAVGSHKHIVN 73
LG G GKV ++ ++ + A+K L + ++ +RE EL L + H+HIV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL-LTMLQHQHIVR 107
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGEL--FQR--------IQQKED---GAFTEREAAII 120
+ + R LL++ E M G+L F R + ED G + +
Sbjct: 108 ----FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
+++ + + +L + HRD+ N L G G +
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLV---------------------------GQGLV 196
Query: 181 LKLTDFGFAKKIVS-NKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLC 237
+K+ DFG ++ I S + + P ++ PE + K+ D+WS GV+++ I
Sbjct: 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY 256
Query: 238 GFPPFF 243
G P++
Sbjct: 257 GKQPWY 262
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 123/319 (38%), Gaps = 80/319 (25%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYN 83
LG G G V ++ + ++ A+K + TV ++ + L + + V+ + +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP--FTVTFY 72
Query: 84 GSRC----LLVIMECMHGGELFQRIQQKEDGAFTEREAAI--IMNEICSAIKFLHDQ-NI 136
G+ + + ME M L + +Q D T E + I I A++ LH + ++
Sbjct: 73 GALFREGDVWICMELMDTS-LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 137 AHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNK 196
HRDVKP N+L G +K+ DFG + +V +
Sbjct: 132 IHRDVKPSNVLINALGQ---------------------------VKMCDFGISGYLVDDV 164
Query: 197 ASLQTPCYTPYYVAPEVLGPD----KYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISP 252
A PY +APE + P+ Y DIWSLG+ M
Sbjct: 165 AKDIDAGCKPY-MAPERINPELNQKGYSVKSDIWSLGITM-------------------- 203
Query: 253 GMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKWISQFNQVPQ 312
I L FP W Q+ K +++ +PS +L D K+ ++F V
Sbjct: 204 -----IELAILRFPYDSWGTPFQQLKQVVE-----EPSPQLPAD-----KFSAEF--VDF 246
Query: 313 TPLCTGKMLKEGEETWPEV 331
T C K KE T+PE+
Sbjct: 247 TSQCLKKNSKE-RPTYPEL 264
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 109 DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGG--ILKLTDFGDVK 166
D F+ + +I ++ S ++++H +N+ +RDVKPEN L +PG+ ++ + DFG K
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 60/235 (25%)
Query: 21 TEILGLGINGKV---LQIVEKKTSEV-YALKVLHDTVKARREVE-----LQLAVGSHKHI 71
++LG G G V + + E +T ++ A+K+L++T + VE L +A H H+
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN---EICSAI 128
V + V S + ++ + M G L + + + +D ++ +++N +I +
Sbjct: 103 VRLLGVCL-----SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQ----LLLNWCVQIAKGM 153
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDF-------GDVKPENLLYTKPGDGGIL 181
+L ++ + HRD+ N+L P +K+TDF GD K N DGG +
Sbjct: 154 MYLEERRLVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYN------ADGGKM 204
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
+ ++A E + K+ D+WS GV ++ L+
Sbjct: 205 PIK-----------------------WMALECIHYRKFTHQSDVWSYGVTIWELM 236
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 24 LGLGINGKVL-----QIVEKKTSEVYALKVLHDTVKA-----RREVELQLAVGSHKHIVN 73
LG G GKV ++ ++ + A+K L + ++ +RE EL L + H+HIV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL-LTMLQHQHIVR 84
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGEL--FQR--------IQQKED---GAFTEREAAII 120
+ + R LL++ E M G+L F R + ED G + +
Sbjct: 85 ----FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
+++ + + +L + HRD+ N L G G +
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCLV---------------------------GQGLV 173
Query: 181 LKLTDFGFAKKIVS-NKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLC 237
+K+ DFG ++ I S + + P ++ PE + K+ D+WS GV+++ I
Sbjct: 174 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY 233
Query: 238 GFPPFF 243
G P++
Sbjct: 234 GKQPWY 239
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 60/235 (25%)
Query: 21 TEILGLGINGKV---LQIVEKKTSEV-YALKVLHDTVKARREVE-----LQLAVGSHKHI 71
++LG G G V + + E +T ++ A+K+L++T + VE L +A H H+
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 72 VNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMN---EICSAI 128
V + V S + ++ + M G L + + + +D ++ +++N +I +
Sbjct: 80 VRLLGVCL-----SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQ----LLLNWCVQIAKGM 130
Query: 129 KFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDF-------GDVKPENLLYTKPGDGGIL 181
+L ++ + HRD+ N+L P +K+TDF GD K N DGG +
Sbjct: 131 MYLEERRLVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYN------ADGGKM 181
Query: 182 KLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILL 236
+ ++A E + K+ D+WS GV ++ L+
Sbjct: 182 PIK-----------------------WMALECIHYRKFTHQSDVWSYGVTIWELM 213
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 33/196 (16%)
Query: 51 DTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG 110
+ ++ +E + ++ + S+ + NI +Y ++N R ++ + C G+L+ R+ K
Sbjct: 62 EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC---GDLYHRLLDKAHP 118
Query: 111 AFTEREAAIIMNEICSAIKFLHDQN--IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPE 168
+ ++++ I I+++ +QN I HRD++ N+ L + P
Sbjct: 119 IKWSVKLRLMLD-IALGIEYMQNQNPPIVHRDLRSPNIF-----------LQSLDENAPV 166
Query: 169 NLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK--YDKSCDIW 226
K+ DFG +++ V + + L ++APE +G ++ Y + D +
Sbjct: 167 -----------CAKVADFGTSQQSVHSVSGLLG---NFQWMAPETIGAEEESYTEKADTY 212
Query: 227 SLGVIMYILLCGFPPF 242
S +I+Y +L G PF
Sbjct: 213 SFAMILYTILTGEGPF 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 24 LGLGINGKVL-----QIVEKKTSEVYALKVLHDTVKA-----RREVELQLAVGSHKHIVN 73
LG G GKV ++ ++ + A+K L + ++ +RE EL L + H+HIV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL-LTMLQHQHIVR 78
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGEL--FQR--------IQQKED---GAFTEREAAII 120
+ + R LL++ E M G+L F R + ED G + +
Sbjct: 79 ----FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 121 MNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
+++ + + +L + HRD+ N L G G +
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCLV---------------------------GQGLV 167
Query: 181 LKLTDFGFAKKIVS-NKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY-ILLC 237
+K+ DFG ++ I S + + P ++ PE + K+ D+WS GV+++ I
Sbjct: 168 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY 227
Query: 238 GFPPFF 243
G P++
Sbjct: 228 GKQPWY 233
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK 166
F+ + ++ +++ S I+++H +N HRDVKP+N L G ++ + DFG K
Sbjct: 102 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK 166
F+ + ++ +++ S I+++H +N HRDVKP+N L G ++ + DFG K
Sbjct: 102 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVK 166
F+ + ++ +++ S I+++H +N HRDVKP+N L G ++ + DFG K
Sbjct: 100 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 80/312 (25%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED---------GAFTEREAAIIMN- 122
N+ L+VI+E G L ++ K + F E I +
Sbjct: 95 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
++ ++FL + HRD+ N+L + + ++K
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLS---------------------------EKNVVK 184
Query: 183 LTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILL 236
+ DFG A+ I + K + P ++APE + Y D+WS GV+++ I
Sbjct: 185 IXDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 237 CGFPPFFSNHGQAISPGMKNRI----RLGQFDFPNPEWEHVSQEAKTLIKNML-CV--DP 289
G P+ G I R+ R+ D+ PE + + ML C +P
Sbjct: 242 LGASPY---PGVKIDEEFXRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGEP 288
Query: 290 SERLTIDQVMEN 301
S+R T +++E+
Sbjct: 289 SQRPTFSELVEH 300
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 88/232 (37%), Gaps = 49/232 (21%)
Query: 88 LLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLL 147
+ +I E M G L ++ E + +I + F+ +N HRD++ N+L
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 310
Query: 148 YTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPY 207
+ + K+ DFG A+ V K ++
Sbjct: 311 VSA---------------------------SLVCKIADFGLAR--VGAKFPIK------- 334
Query: 208 YVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQAISPGMKNR--IRLGQFDF 265
+ APE + + D+WS G+++ ++ +G+ PGM N IR + +
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIV--------TYGRIPYPGMSNPEVIRALERGY 386
Query: 266 PNPEWEHVSQEAKTLIKNMLCVDPSERLT---IDQVMENKWISQFNQVPQTP 314
P E+ +E ++ P ER T I V+++ + + +Q Q P
Sbjct: 387 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQP 438
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 66/166 (39%), Gaps = 33/166 (19%)
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
Y+ + L ++ + G L+ + E F ++ I + + +LH ++I HRD+
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASL 199
K N+ + +K+ DFG A K S
Sbjct: 147 KSNNIFLH---------------------------EDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 200 QTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+ + ++APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 77/337 (22%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVLHDTVKARR------EVELQLAVGSHKHIV 72
LG G GKV+Q I + T A+K+L + A E+++ +G H ++V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIM----------- 121
N+ L+VI+E G L ++ K D F ++AA+ M
Sbjct: 95 NLLGA---CTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGL 151
Query: 122 -------------NEICSAIKFLHDQNIAHRDVKPE---NLLYTKPGDGGILKLTDFG-- 163
+E ++ F D++++ DV+ E + Y +P L F
Sbjct: 152 EQGKKPRLDSVTSSESFASSGFQEDKSLS--DVEEEEDSDGFYKEPITMEDLISYSFQVA 209
Query: 164 --------------DVKPENLLYTKPGDGGILKLTDFGFAKKIVSN-----KASLQTPCY 204
D+ N+L + + ++K+ DFG A+ I N K + P
Sbjct: 210 RGMEFLSSRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK 266
Query: 205 TPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCGFPPFFSNHGQAISPGMKNRIRLGQF 263
++APE + Y D+WS GV+++ I G P+ G + +R+R G
Sbjct: 267 ---WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY---PGVQMDEDFCSRLREG-M 319
Query: 264 DFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVME 300
PE+ + E ++ + DP ER +++E
Sbjct: 320 RMRAPEYS--TPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 63/260 (24%)
Query: 68 HKHIVNIKDVYENI-YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICS 126
H IV I + E+ +G ++ME + G L + QK A EA + EI
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVA----EAIAYLLEILP 193
Query: 127 AIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDF 186
A+ +LH + + D+KPEN++ T+ LKL D G V ++ F
Sbjct: 194 ALSYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLGAVS---------------RINSF 234
Query: 187 GFAKKIVSNKASLQTPCYTPYYVAPEVL--GPDKYDKSCDIWSLGVIMYILLCGFPPFFS 244
G+ TP + APE++ GP + DI+++G + L P +
Sbjct: 235 GYLYG-------------TPGFQAPEIVRTGP---TVATDIYTVGRTLAALTLDLP---T 275
Query: 245 NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVMENKW- 303
+G+ + ++ L +D L++ + DP +R T + M +
Sbjct: 276 RNGRYVDGLPEDDPVLKTYD-----------SYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324
Query: 304 ------ISQFNQVPQTPLCT 317
++Q VP+ L T
Sbjct: 325 GVLREVVAQDTGVPRPGLST 344
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 81/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 40 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 84
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F ++ I + + +LH ++I HRD+K N+
Sbjct: 85 VTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH- 142
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
+ +K+ DFG A K S + + +
Sbjct: 143 --------------------------EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAA--------IIMNEI 124
N+ L+VI+E G L ++ K + +EA + + I
Sbjct: 97 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 125 C------SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
C ++FL + HRD+ N+L + +
Sbjct: 154 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 186
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 187 NVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 243
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 244 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 293
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 294 PSQRPTFSELVEH 306
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 33/166 (19%)
Query: 82 YNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDV 141
Y+ L ++ + G L+ + E F ++ I + + +LH ++I HRD+
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 142 KPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASL 199
K N+ + +K+ DFG A K S
Sbjct: 147 KSNNIFLH---------------------------EDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 200 QTPCYTPYYVAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+ + ++APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 93/246 (37%), Gaps = 55/246 (22%)
Query: 13 IQDDYDISTEIL-----------GLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVEL 61
+ D++++S E + G+ G I++ + A+K ++++ R +E
Sbjct: 8 VPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEF 67
Query: 62 QLAVGSHK-----HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF---- 112
K H+V + V + LV+ME M G+L ++ A
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSK----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 113 ----TEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKP- 167
T +E + EI + +L+ + HRD+ N + +K+ DFG +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDI 180
Query: 168 ENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWS 227
Y + G G+L + ++APE L + S D+WS
Sbjct: 181 YETAYYRKGGKGLLPVR-----------------------WMAPESLKDGVFTTSSDMWS 217
Query: 228 LGVIMY 233
GV+++
Sbjct: 218 FGVVLW 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 33/196 (16%)
Query: 51 DTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDG 110
+ ++ +E + ++ + S+ + NI +Y ++N R ++ + C G+L+ R+ K
Sbjct: 62 EMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC---GDLYHRLLDKAHP 118
Query: 111 AFTEREAAIIMNEICSAIKFLHDQN--IAHRDVKPENLLYTKPGDGGILKLTDFGDVKPE 168
+ ++++ I I+++ +QN I HRD++ N+ L + P
Sbjct: 119 IKWSVKLRLMLD-IALGIEYMQNQNPPIVHRDLRSPNIF-----------LQSLDENAPV 166
Query: 169 NLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK--YDKSCDIW 226
K+ DF +++ V + + L ++APE +G ++ Y + D +
Sbjct: 167 -----------CAKVADFSLSQQSVHSVSGLLG---NFQWMAPETIGAEEESYTEKADTY 212
Query: 227 SLGVIMYILLCGFPPF 242
S +I+Y +L G PF
Sbjct: 213 SFAMILYTILTGEGPF 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 74/309 (23%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED---------GAFTEREAAIIMN- 122
N+ L+VI+E G L ++ K + F E I +
Sbjct: 95 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
++ ++FL + HRD+ N+L + + ++K
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLS---------------------------EKNVVK 184
Query: 183 LTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILL 236
+ DFG A+ I + K + P ++APE + Y D+WS GV+++ I
Sbjct: 185 ICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 237 CGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--DPSER 292
G P+ + +K R+ D+ PE + + ML C +PS+R
Sbjct: 242 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGEPSQR 291
Query: 293 LTIDQVMEN 301
T +++E+
Sbjct: 292 PTFSELVEH 300
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
I EI + +LH + I H+D+K +N+ Y D G + +TDFG +L +
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRRE-- 188
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEV---LGPDK------YDKSCDIWSLGV 230
+K +Q ++APE+ L PD + K D+++LG
Sbjct: 189 ---------------DKLRIQNGWLC--HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 231 IMYILLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPS 290
I Y L PF + +AI M ++ PN + +E ++ +
Sbjct: 232 IWYELHAREWPFKTQPAEAIIWQMGTGMK------PNLSQIGMGKEISDILLFCWAFEQE 285
Query: 291 ERLTIDQVME 300
ER T ++M+
Sbjct: 286 ERPTFTKLMD 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 164
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYY 208
+ +K+ DFG + +Y K D V NK + P +
Sbjct: 165 ---DEKFTVKVADFGLARD---MYDKEFDS--------------VHNKTGAKLPV---KW 201
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDF-P 266
+A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL Q ++ P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 261
Query: 267 NPEWE 271
+P +E
Sbjct: 262 DPLYE 266
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 167
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYY 208
+ +K+ DFG + +Y K D V NK + P +
Sbjct: 168 D---EKFTVKVADFGLARD---MYDKEFDS--------------VHNKTGAKLPV---KW 204
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDF-P 266
+A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL Q ++ P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 264
Query: 267 NPEWE 271
+P +E
Sbjct: 265 DPLYE 269
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 38/144 (26%)
Query: 109 DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPE 168
D FT + +I ++ S ++++H +N+ +RDVKPEN L + G+ K E
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGN------------KKE 138
Query: 169 NLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKY--------- 219
+ ++ + DFG AK+ + +T + PY + G +Y
Sbjct: 139 H----------VIHIIDFGLAKEYIDP----ETKKHIPYREHKSLTGTARYMSINTHLGK 184
Query: 220 --DKSCDIWSLG-VIMYILLCGFP 240
+ D+ +LG + MY L P
Sbjct: 185 EQSRRDDLEALGHMFMYFLRGSLP 208
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 109 DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGG--ILKLTDFGDVK 166
D F+ + +I ++ S ++++H +N+ +RDVKPEN L +PG+ ++ + DF K
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 166
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYY 208
+ +K+ DFG + +Y K D V NK + P +
Sbjct: 167 D---EKFTVKVADFGLARD---MYDKEFDS--------------VHNKTGAKLPV---KW 203
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDF-P 266
+A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL Q ++ P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 263
Query: 267 NPEWE 271
+P +E
Sbjct: 264 DPLYE 268
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 109 DGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGG--ILKLTDFGDVK 166
D F+ + +I ++ S ++++H +N+ +RDVKPEN L +PG+ ++ + DF K
Sbjct: 120 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 179
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 58/245 (23%)
Query: 24 LGLGINGKVL-----QIVEKKTSEVYALKVLHDTV-KAR----REVELQLAVGSHKHIVN 73
LG G GKV + ++ + A+K L D AR RE EL L H+HIV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL-LTNLQHEHIVK 79
Query: 74 IKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGA-----------FTEREAAIIMN 122
Y G L+++ E M G+L + ++ A T+ + I
Sbjct: 80 F---YGVCVEGDP-LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPGDGG 179
+I + + +L Q+ HRD+ N L G+ ++K+ DFG DV + Y + G
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTD--YYRVGGHT 190
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-ILLCG 238
+L + ++ PE + K+ D+WSLGV+++ I G
Sbjct: 191 MLPIR-----------------------WMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 227
Query: 239 FPPFF 243
P++
Sbjct: 228 KQPWY 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 113 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 171
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYY 208
+ +K+ DFG + +Y K D V NK + P +
Sbjct: 172 D---EKFTVKVADFGLARD---MYDKEFDS--------------VHNKTGAKLPV---KW 208
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDF-P 266
+A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL Q ++ P
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 268
Query: 267 NPEWE 271
+P +E
Sbjct: 269 DPLYE 273
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 166
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYY 208
+ +K+ DFG + +Y K D V NK + P +
Sbjct: 167 D---EKFTVKVADFGLARD---MYDKEFDS--------------VHNKTGAKLPV---KW 203
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDF-P 266
+A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL Q ++ P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 263
Query: 267 NPEWE 271
+P +E
Sbjct: 264 DPLYE 268
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 76/311 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-----------GAFTEREAAIIM 121
N+ L+VI+E G L ++ K + F E I
Sbjct: 97 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 122 N-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGI 180
+ ++ ++FL + HRD+ N+L + + +
Sbjct: 154 SFQVAKGMEFLASRKXIHRDLAARNILLS---------------------------EKNV 186
Query: 181 LKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY-I 234
+K+ DFG A+ I + K + P ++APE + Y D+WS GV+++ I
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 235 LLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--DPS 290
G P+ + +K R+ D+ PE + + ML C +PS
Sbjct: 244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGEPS 293
Query: 291 ERLTIDQVMEN 301
+R T +++E+
Sbjct: 294 QRPTFSELVEH 304
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 48/226 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHK-----HIVNIKDVY 78
G+ G I++ + A+K ++++ R +E K H+V + V
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF--------TEREAAIIMNEICSAIKF 130
+ LV+ME M G+L ++ A T +E + EI + +
Sbjct: 90 SK----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPGDGGILKLTDFG 187
L+ + HRD+ N + +K+ DFG D+ + Y + G G+L +
Sbjct: 146 LNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETD--YYRKGGKGLLPVR--- 197
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++APE L + S D+WS GV+++
Sbjct: 198 --------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 26/117 (22%)
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ I FLH+ + HRD+K N+L + K++DFG L
Sbjct: 143 ANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFG-----------------LARA 182
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
FA+ ++ ++ T Y+APE L + KS DI+S GV++ ++ G P
Sbjct: 183 SEKFAQTVMXSRI-----VGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITGLPA 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 123/312 (39%), Gaps = 77/312 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED------------GAFTEREAAII 120
N+ L+VI+E G L ++ K + F E I
Sbjct: 96 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 121 MN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
+ ++ ++FL + HRD+ N+L + +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EKN 185
Query: 180 ILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY- 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 234 ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--DP 289
I G P+ + +K R+ D+ PE + + ML C +P
Sbjct: 243 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGEP 292
Query: 290 SERLTIDQVMEN 301
S+R T +++E+
Sbjct: 293 SQRPTFSELVEH 304
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 167 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 225
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYY 208
+ +K+ DFG + +Y K D V NK + P +
Sbjct: 226 D---EKFTVKVADFGLARD---MYDKEFDS--------------VHNKTGAKLPV---KW 262
Query: 209 VAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRLGQFDF-P 266
+A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL Q ++ P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 322
Query: 267 NPEWE 271
+P +E
Sbjct: 323 DPLYE 327
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 55/276 (19%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+ L L H +I+ ++D++ + + L ++ + +L Q I + +
Sbjct: 75 RVLREIRL-LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVIS 132
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ M I + LH+ + HRD+ P N+L L D D+
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL-----------LADNNDI-------- 173
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
+ DF A++ ++ + +Y APE++ K + K D+WS G +M
Sbjct: 174 --------TICDFNLAREDTADANKTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 233 YILLCGFPPF----FSNHGQAI----------------SPGMKNRIRLGQFDFPNPEWEH 272
+ F F N I SP ++ +R + P W
Sbjct: 225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTA 284
Query: 273 VSQEAK----TLIKNMLCVDPSERLTIDQVMENKWI 304
V A LI ML +P R++ +Q + + +
Sbjct: 285 VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 55/276 (19%)
Query: 54 KARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFT 113
+ RE+ L L H +I+ ++D++ + + L ++ + +L Q I + +
Sbjct: 75 RVLREIRL-LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVIS 132
Query: 114 EREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYT 173
+ M I + LH+ + HRD+ P N+L L D D+
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL-----------LADNNDI-------- 173
Query: 174 KPGDGGILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDK-YDKSCDIWSLGVIM 232
+ DF A++ ++ + +Y APE++ K + K D+WS G +M
Sbjct: 174 --------TICDFNLAREDTADANKTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 233 YILLCGFPPF----FSNHGQAI----------------SPGMKNRIRLGQFDFPNPEWEH 272
+ F F N I SP ++ +R + P W
Sbjct: 225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTA 284
Query: 273 VSQEAK----TLIKNMLCVDPSERLTIDQVMENKWI 304
V A LI ML +P R++ +Q + + +
Sbjct: 285 VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 48/226 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHK-----HIVNIKDVY 78
G+ G I++ + A+K ++++ R +E K H+V + V
Sbjct: 29 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 88
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF--------TEREAAIIMNEICSAIKF 130
+ LV+ME M G+L ++ A T +E + EI + +
Sbjct: 89 SK----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 144
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPGDGGILKLTDFG 187
L+ + HRD+ N + +K+ DFG D+ + Y + G G+L +
Sbjct: 145 LNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETD--YYRKGGKGLLPVR--- 196
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++APE L + S D+WS GV+++
Sbjct: 197 --------------------WMAPESLKDGVFTTSSDMWSFGVVLW 222
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI+E G L ++ K + F E I
Sbjct: 95 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 184
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 242 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 291
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 292 PSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI+E G L ++ K + F E I
Sbjct: 95 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 184
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 185 NVVKICDFGLARDIYKDPDXVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 242 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 291
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 292 PSQRPTFSELVEH 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI+E G L ++ K + F E I
Sbjct: 95 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 184
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 241
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 242 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 291
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 292 PSQRPTFSELVEH 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI+E G L ++ K + F E I
Sbjct: 86 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 175
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 176 NVVKICDFGLARDIXKDPDXVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 233 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 282
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 283 PSQRPTFSELVEH 295
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ I FLH+ + HRD+K N+L + K++DFG L
Sbjct: 143 ANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFG-----------------LARA 182
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
FA+ ++ + T Y+APE L + KS DI+S GV++ ++ G P
Sbjct: 183 SEKFAQTVMXXRI-----VGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITGLPA 233
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI+E G L ++ K + F E I
Sbjct: 132 NLLGA---CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 189 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 221
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 222 NVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 278
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 279 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 328
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 329 PSQRPTFSELVEH 341
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 125 CSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLT 184
+ I FLH+ + HRD+K N+L + K++DFG + K
Sbjct: 137 ANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLARASE------------KFA 181
Query: 185 DFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPP 241
+IV A Y+APE L + KS DI+S GV++ ++ G P
Sbjct: 182 QXVMXXRIVGTTA----------YMAPEALRGEITPKS-DIYSFGVVLLEIITGLPA 227
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +KFL + HRD+ N +
Sbjct: 109 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 167
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 168 DE-------KFT--------------------VKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 201 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 257
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 258 LQPEYCPDPLYE 269
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 122/313 (38%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI E G L ++ K + F E I
Sbjct: 86 NLLGA---CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 175
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 176 NVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 233 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 282
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 283 PSQRPTFSELVEH 295
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 122/313 (38%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI E G L ++ K + F E I
Sbjct: 86 NLLGA---CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 175
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 176 NVVKICDFGLARDIXKDPDXVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 233 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 282
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 283 PSQRPTFSELVEH 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 122/313 (38%), Gaps = 78/313 (24%)
Query: 24 LGLGINGKVLQ-----IVEKKTSEVYALKVL-----HDTVKA-RREVELQLAVGSHKHIV 72
LG G G+V++ I + T A+K+L H +A E+++ + +G H ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 73 NIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKED-------------GAFTEREAAI 119
N+ L+VI E G L ++ K + F E I
Sbjct: 86 NLLGA---CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 120 IMN-EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
+ ++ ++FL + HRD+ N+L + +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLS---------------------------EK 175
Query: 179 GILKLTDFGFAKKIVSN-----KASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++K+ DFG A+ I + K + P ++APE + Y D+WS GV+++
Sbjct: 176 NVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIFDRVYTIQSDVWSFGVLLW 232
Query: 234 -ILLCGFPPFFS-NHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNML-CV--D 288
I G P+ + +K R+ D+ PE + + ML C +
Sbjct: 233 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPE----------MYQTMLDCWHGE 282
Query: 289 PSERLTIDQVMEN 301
PS+R T +++E+
Sbjct: 283 PSQRPTFSELVEH 295
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 40 TSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLVIMECMHGGE 99
T+E A+K+ + +K+R +L L +K + + V + Y G M G
Sbjct: 28 TNEYVAIKL--EPIKSR-APQLHLEYRFYKQLSATEGVPQVYYFGPXGKYNAMVLELLGP 84
Query: 100 LFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDG--GIL 157
+ + D FT + +I ++ + ++++H +++ +RDVKPEN L +PG +
Sbjct: 85 SLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAI 144
Query: 158 KLTDFGDVK 166
+ DFG K
Sbjct: 145 HIIDFGLAK 153
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 48/226 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHK-----HIVNIKDVY 78
G+ G I++ + A+K ++++ R +E K H+V + V
Sbjct: 30 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 89
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF--------TEREAAIIMNEICSAIKF 130
+ LV+ME M G+L ++ A T +E + EI + +
Sbjct: 90 SK----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPGDGGILKLTDFG 187
L+ + HR++ N + +K+ DFG D+ + Y + G G+L +
Sbjct: 146 LNAKKFVHRNLAARNCMVAH---DFTVKIGDFGMTRDIYETD--YYRKGGKGLLPVR--- 197
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++APE L + S D+WS GV+++
Sbjct: 198 --------------------WMAPESLKDGVFTTSSDMWSFGVVLW 223
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 123 EIC----SAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
EIC + +LH + I HRDVK N+L + + K+TDFG K
Sbjct: 143 EICIGAARGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGISK------------ 187
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCG 238
K T+ G K +L Y+ PE + + D++S GV+++ +LC
Sbjct: 188 ---KGTELGQTHLXXVVKGTLG-------YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 120 IMNEICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGG 179
I + I FLH+ + HRD+K N+L + K++DFG
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFG---------------- 169
Query: 180 ILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGF 239
L FA+ + ++ T Y APE L + KS DI+S GV++ ++ G
Sbjct: 170 -LARASEKFAQXVXXSRI-----VGTTAYXAPEALRGEITPKS-DIYSFGVVLLEIITGL 222
Query: 240 P 240
P
Sbjct: 223 P 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 86/226 (38%), Gaps = 48/226 (21%)
Query: 24 LGLGINGKVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHK-----HIVNIKDVY 78
G+ G I++ + A+K ++++ R +E K H+V + V
Sbjct: 31 FGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV 90
Query: 79 ENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAF--------TEREAAIIMNEICSAIKF 130
+ LV+ME M G+L ++ A T +E + EI + +
Sbjct: 91 SK----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 146
Query: 131 LHDQNIAHRDVKPENLLYTKPGDGGILKLTDFG---DVKPENLLYTKPGDGGILKLTDFG 187
L+ + HR++ N + +K+ DFG D+ + Y + G G+L +
Sbjct: 147 LNAKKFVHRNLAARNCMVAH---DFTVKIGDFGMTRDIYETD--YYRKGGKGLLPVR--- 198
Query: 188 FAKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMY 233
++APE L + S D+WS GV+++
Sbjct: 199 --------------------WMAPESLKDGVFTTSSDMWSFGVVLW 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 165
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 166 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 199 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 255
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 256 LQPEYCPDPLYE 267
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 126 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 184
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 185 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 218 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 274
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 275 LQPEYCPDPLYE 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 107 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 165
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 166 DE-------KFT--------------------VKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 199 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 255
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 256 LQPEYCPDPLYE 267
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 166
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 167 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 200 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 256
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 257 LQPEYCPDPLYE 268
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 127 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 185
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 186 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 219 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 275
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 276 LQPEYCPDPLYE 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 163
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 164 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 197 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 253
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 254 LQPEYCPDPLYE 265
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 108 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 166
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 167 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 200 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 256
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 257 LQPEYCPDPLYE 268
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 100 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 158
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 159 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 192 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 248
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 249 LQPEYCPDPLYE 260
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 106 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 164
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 165 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 198 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 254
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 255 LQPEYCPDPLYE 266
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 89 LVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLY 148
LV++ M G+L I+ + T ++ ++ +K+L + HRD+ N +
Sbjct: 103 LVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 161
Query: 149 TKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFAKKI-------VSNKASLQT 201
+ K T +K+ DFG A+ + V NK +
Sbjct: 162 DE-------KFT--------------------VKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 202 PCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLC-GFPPFFSNHGQAISPGMKNRIRL 260
P ++A E L K+ D+WS GV+++ L+ G PP+ + I+ + RL
Sbjct: 195 PV---KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL 251
Query: 261 GQFDF-PNPEWE 271
Q ++ P+P +E
Sbjct: 252 LQPEYCPDPLYE 263
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIK 129
HI+ + D + + ++++ E + G L I++ E I ++ +
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 130 FLHDQ-NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H + I H D+KPEN+L +++ D PENL+ K D G D +
Sbjct: 146 YMHRRCGIIHTDIKPENVL---------MEIVD----SPENLIQIKIADLGNACWYDEHY 192
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ 248
I + + Y +PEVL + DIWS +++ L+ G F + G
Sbjct: 193 TNSIQTRE-----------YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 249 AIS 251
+ +
Sbjct: 242 SYT 244
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 70 HIVNIKDVYENIYNGSRCLLVIMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIK 129
HI+ + D + + ++++ E + G L I++ E I ++ +
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 130 FLHDQ-NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGF 188
++H + I H D+KPEN+L +++ D PENL+ K D G D +
Sbjct: 146 YMHRRCGIIHTDIKPENVL---------MEIVD----SPENLIQIKIADLGNACWYDEHY 192
Query: 189 AKKIVSNKASLQTPCYTPYYVAPEVLGPDKYDKSCDIWSLGVIMYILLCGFPPFFSNHGQ 248
I + + Y +PEVL + DIWS +++ L+ G F + G
Sbjct: 193 TNSIQTRE-----------YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 249 AIS 251
+ +
Sbjct: 242 SYT 244
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 196 KASLQTP--CYTPYYVAPEVLGPDKYD---KSCDIWSLGVIMYILLCGFPPFFSNHGQAI 250
K S Q+P Y P +VAPE L D +S D+WS V+++ L+ PF I
Sbjct: 160 KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI 219
Query: 251 SPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLTIDQVM 299
GMK + + P HVS+ L+K + DP++R D ++
Sbjct: 220 --GMKVALEGLRPTIPPGISPHVSK----LMKICMNEDPAKRPKFDMIV 262
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 81/217 (37%), Gaps = 71/217 (32%)
Query: 120 IMNEICSAIKFLHDQ-NIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDG 178
I I A++ LH + ++ HRDVKP N+L N L
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLI--------------------NAL------- 173
Query: 179 GILKLTDFGFAKKIVSNKASLQTPCYTPYYVAPEVLGPD----KYDKSCDIWSLGVIMYI 234
G +K DFG + +V + A PY APE + P+ Y DIWSLG+
Sbjct: 174 GQVKXCDFGISGYLVDDVAKDIDAGCKPY-XAPERINPELNQKGYSVKSDIWSLGI---- 228
Query: 235 LLCGFPPFFSNHGQAISPGMKNRIRLGQFDFPNPEWEHVSQEAKTLIKNMLCVDPSERLT 294
I L FP W Q+ K +++ +PS +L
Sbjct: 229 ---------------------TXIELAILRFPYDSWGTPFQQLKQVVE-----EPSPQLP 262
Query: 295 IDQVMENKWISQFNQVPQTPLCTGKMLKEGEETWPEV 331
D K+ ++F V T C K KE T+PE+
Sbjct: 263 AD-----KFSAEF--VDFTSQCLKKNSKE-RPTYPEL 291
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPG--DGGILKLTDFGDVK 166
F+ + A+ ++ + ++ +H++++ +RD+KP+N L +P + ++ + DFG VK
Sbjct: 102 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 112 FTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTKPG--DGGILKLTDFGDVK 166
F+ + A+ ++ + ++ +H++++ +RD+KP+N L +P + ++ + DFG VK
Sbjct: 103 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 83/217 (38%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ + L +
Sbjct: 36 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTAPQLAI 80
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 81 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 138
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 139 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 28/112 (25%)
Query: 123 EICSAIKFLHDQNIAHRDVKPENLLYTKPGDGGILKLTDFGDVKPENLLYTKPGDGGILK 182
++C + FL HRD+ N L + D+ +K
Sbjct: 112 DVCEGMAFLESHQFIHRDLAARNCLVDR-------------DL--------------CVK 144
Query: 183 LTDFGFAKKIVSNKASLQTPCYTPY-YVAPEVLGPDKYDKSCDIWSLGVIMY 233
++DFG + ++ ++ P + APEV KY D+W+ G++M+
Sbjct: 145 VSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMW 196
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 64 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 108
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 109 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 166
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 167 -----------------EDL---------TVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 64 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 108
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 109 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 166
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 167 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 63 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 107
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 108 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 165
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 166 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 41 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 85
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 86 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 143
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 144 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 56 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 100
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 101 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 158
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 159 -----------------EDL---------TVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 41 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 85
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 86 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 143
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 144 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 38 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 82
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 83 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 140
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 141 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 36 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 80
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 81 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 138
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 139 -----------------EDL---------TVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 82/217 (37%), Gaps = 48/217 (22%)
Query: 31 KVLQIVEKKTSEVYALKVLHDTVKARREVELQLAVGSHKHIVNIKDVYENIYNGSRCLLV 90
K+L + ++ A K ++ R V + L +G Y+ L +
Sbjct: 36 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG---------------YSTKPQLAI 80
Query: 91 IMECMHGGELFQRIQQKEDGAFTEREAAIIMNEICSAIKFLHDQNIAHRDVKPENLLYTK 150
+ + G L+ + E F + I + + +LH ++I HRD+K N+
Sbjct: 81 VTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH- 138
Query: 151 PGDGGILKLTDFGDVKPENLLYTKPGDGGILKLTDFGFA--KKIVSNKASLQTPCYTPYY 208
E+L +K+ DFG A K S + + +
Sbjct: 139 -----------------EDL---------TVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 209 VAPEVL---GPDKYDKSCDIWSLGVIMYILLCGFPPF 242
+APEV+ + Y D+++ G+++Y L+ G P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,515,536
Number of Sequences: 62578
Number of extensions: 500973
Number of successful extensions: 4268
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 257
Number of HSP's that attempted gapping in prelim test: 1282
Number of HSP's gapped (non-prelim): 1473
length of query: 372
length of database: 14,973,337
effective HSP length: 100
effective length of query: 272
effective length of database: 8,715,537
effective search space: 2370626064
effective search space used: 2370626064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)