Query psy3152
Match_columns 402
No_of_seqs 143 out of 218
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 17:44:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3152.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3152hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lyd_A Decapping protein 1; DC 100.0 7.6E-48 2.6E-52 337.9 8.8 126 1-126 8-133 (134)
2 2qkl_A DCP1 protein, SPBC3B9.2 100.0 2.5E-47 8.5E-52 332.1 8.3 123 1-124 1-125 (127)
3 1q67_A Decapping protein invol 100.0 5.7E-39 2E-43 299.5 9.4 124 5-128 18-226 (231)
4 2wx4_A DCP1, decapping protein 99.7 7.3E-18 2.5E-22 123.5 3.2 40 362-401 6-45 (46)
5 2wx3_A MRNA-decapping enzyme 1 99.7 1.1E-17 3.9E-22 124.9 0.5 41 361-401 7-47 (51)
6 1evh_A WH1 domain, protein (ME 97.3 0.0018 6E-08 54.8 10.7 99 28-127 8-111 (112)
7 1qc6_A EVH1 domain from ENA/VA 97.3 0.0033 1.1E-07 54.2 12.4 100 28-131 8-116 (130)
8 1egx_A VAsp, vasodilator-stimu 97.3 0.002 6.8E-08 54.8 10.7 100 28-128 8-114 (115)
9 1ddw_A GLGF-domain protein hom 97.2 0.0035 1.2E-07 53.8 11.0 102 28-131 8-114 (120)
10 1i2h_A PSD-ZIP45(homer-1C/VESL 97.1 0.0062 2.1E-07 55.3 12.2 99 28-128 13-116 (168)
11 1xod_A Spred1; sprouty, EVH1, 96.7 0.018 6.1E-07 49.2 11.6 101 28-129 8-117 (118)
12 2jp2_A Spred-2, sprouty-relate 96.7 0.014 4.7E-07 50.5 10.8 100 28-128 17-125 (126)
13 3syx_A Sprouty-related, EVH1 d 95.9 0.12 4.2E-06 45.2 12.3 103 28-131 15-126 (130)
14 2ifs_A N-WAsp, wiskott-aldrich 95.2 0.14 4.7E-06 46.5 10.7 101 28-131 62-164 (169)
15 1mke_A WIP - N-WAsp, fusion pr 95.2 0.11 3.9E-06 46.3 9.9 100 28-130 45-146 (152)
16 3n7c_A ABR034WP; nuclear pore 93.7 0.44 1.5E-05 41.1 9.9 100 29-130 16-125 (130)
17 1xke_A RAN-binding protein 2; 93.7 0.65 2.2E-05 39.8 10.9 101 29-131 13-125 (130)
18 2y8g_A Ranbp3-B, RAN-binding p 93.3 0.96 3.3E-05 39.2 11.5 95 29-125 20-126 (138)
19 3m1i_B RAN-specific GTPase-act 92.2 1.4 4.9E-05 40.6 11.5 100 28-129 78-190 (191)
20 4hat_B RAN-specific GTPase-act 92.1 1.8 6E-05 37.9 11.5 99 28-128 27-138 (140)
21 2crf_A RAN binding protein 3; 91.9 1.1 3.8E-05 39.4 10.2 96 29-126 32-139 (150)
22 1rrp_B Nuclear pore complex pr 90.7 1.2 4E-05 38.3 8.8 92 29-122 27-130 (134)
23 1k5d_B RAN-specific GTPase-act 90.5 1.9 6.5E-05 39.9 10.7 102 29-132 51-167 (201)
24 2ec1_A Nucleoporin 50 kDa; ran 85.7 7.7 0.00026 33.0 10.6 91 29-123 18-122 (125)
25 1tqz_A Necap1; endocytosis, st 27.0 1.9E+02 0.0065 25.2 7.3 106 18-126 4-129 (133)
26 1m3w_A H10H24; four-helix bund 20.0 51 0.0017 22.0 1.8 15 386-400 7-21 (32)
No 1
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=100.00 E-value=7.6e-48 Score=337.91 Aligned_cols=126 Identities=45% Similarity=0.914 Sum_probs=123.7
Q ss_pred CCCcccchhhHHHHHhcCcchHHHHhhCCcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCceeeC
Q psy3152 1 MAKLTDSEVNVSAIRRVDPMVKDLVDSATHVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLEPV 80 (402)
Q Consensus 1 Mad~t~~~lNL~VLqR~DP~I~sIL~~AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie~I 80 (402)
|||+++.+|||+||||+||+|++||++|+||+||+||.++++|+|+||||+||||+|+..|+|+||||||++++||+++|
T Consensus 8 m~~~~~~~lNL~vL~R~Dp~I~~Il~~a~~v~vY~f~~~~~~W~K~~iEG~LFv~~R~~~P~~~~ivLNR~~~~n~~~~l 87 (134)
T 2lyd_A 8 MADESITRMNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFVEPI 87 (134)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCCEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEECSSSSSEEEEEEETTTTEEEEEEC
T ss_pred cChHHHHhhhHHHHhhhCcHHHHHHhhCCeEEEEEecCCcCceeEcCCcceEEEEEccCCCceEEEEEcCCCCcceeEEc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeEEeCCEEEEEcCCCcEEEEEeeccchhHHHHHHHHHHHHH
Q psy3152 81 VKELDLQLQNPFILYKNKQGLIYGIWFYNKEDCHRISDILQSLVKE 126 (402)
Q Consensus 81 t~~le~elq~~fLiyRn~~~~IyGIWFyd~ed~~rI~~ll~~lv~~ 126 (402)
+++++++++++||+||+++++|||||||+++||+||+++|++|++.
T Consensus 88 ~~~~~~e~~~~~li~r~~~~~I~GiWf~~~~d~~~i~~~l~~l~~~ 133 (134)
T 2lyd_A 88 TGSLELQSQPPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLLKS 133 (134)
T ss_dssp CSSCEEEEETTEEEEEEGGGEEEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEeeCCEEEEECCCCcEEEEEecChHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999874
No 2
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=100.00 E-value=2.5e-47 Score=332.13 Aligned_cols=123 Identities=28% Similarity=0.572 Sum_probs=113.6
Q ss_pred CCC--cccchhhHHHHHhcCcchHHHHhhCCcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCcee
Q psy3152 1 MAK--LTDSEVNVSAIRRVDPMVKDLVDSATHVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLE 78 (402)
Q Consensus 1 Mad--~t~~~lNL~VLqR~DP~I~sIL~~AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie 78 (402)
||| ..+.+|||+||||+||+|++||++|+|||||+||+++++|+|+||||+||||+|+ .|+|+||||||+|++||++
T Consensus 1 ~~~~~~~r~~lNL~vL~R~Dp~I~~Il~~a~~v~vY~f~~~~~~W~K~~iEGtLFv~~R~-~P~~~~iVlNR~~~~n~~~ 79 (127)
T 2qkl_A 1 MEDENILRNAVNLQVLKFHYPEIESIIDIASHVAVYQFDVGSQKWLKTSIEGTFFLVKDQ-RARVGYVILNRNSPENLYL 79 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEEEEECC------CCEEEEEEEEEEEEET-TCCEEEEEEESSSSCCEEE
T ss_pred CccHHHHHHHhHHHHHhhhCchHHHHhccCCeEEEEEecCCCCceEEcCcEEEEEEEEcc-CCceEEEEEcCCCCcCeeE
Confidence 887 5566899999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred eCcCcceeEEeCCEEEEEcCCCcEEEEEeeccchhHHHHHHHHHHH
Q psy3152 79 PVVKELDLQLQNPFILYKNKQGLIYGIWFYNKEDCHRISDILQSLV 124 (402)
Q Consensus 79 ~It~~le~elq~~fLiyRn~~~~IyGIWFyd~ed~~rI~~ll~~lv 124 (402)
+|++++++|++++||+||+++++|||||||+++||+||+++|++|+
T Consensus 80 ~i~~~~~~e~~~~~l~~r~~~~~i~GiWf~~~~d~~~i~~~l~~ll 125 (127)
T 2qkl_A 80 FINHPSNVHLVDRYLIHRTENQHVVGLWMFDPNDMSRIFNIVKESL 125 (127)
T ss_dssp EECSGGGEEEETTEEEEEETTTEEEEEEESSTHHHHHHHHHHHHHT
T ss_pred ecCCCceEEEeCCEEEEEcCCCcEEEEEEEchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999886
No 3
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=100.00 E-value=5.7e-39 Score=299.55 Aligned_cols=124 Identities=29% Similarity=0.565 Sum_probs=113.2
Q ss_pred ccchhhHHHHHhcCcchHHHHhhCCcEEEEEeeCCCCCccccCceeeEEEEEeCCCC-----------------------
Q psy3152 5 TDSEVNVSAIRRVDPMVKDLVDSATHVALYSFNGHKSEWDKTNIEGALFVYRRVESP----------------------- 61 (402)
Q Consensus 5 t~~~lNL~VLqR~DP~I~sIL~~AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P----------------------- 61 (402)
-+.+|||+||+|+||+|++||++++||+||+||.++++|+|++|||+||||.|+..|
T Consensus 18 yRkaLNlnVL~RyDP~IkqIL~~t~hasvYkfd~~~~eW~K~~~eG~LfIy~Rd~~p~~~~l~~s~~~~~~~~~~~~~~~ 97 (231)
T 1q67_A 18 YRKALNFNVIGRYDPKIKQLLFHTPHASLYKWDFKKDEWNKLEYQGVLAIYLRDVSQNTNLLPVSPQEVDIFDSQNGSNN 97 (231)
T ss_dssp ----CCHHHHHHHCTTEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEECCC------------------------
T ss_pred HHHHhHHHHHHhhChhHHHHHhcCCeEEEEEecCCCCceEecCcEEEEEEEEecCCCCccccCcccccccchhccccccc
Confidence 467999999999999999999999999999999999999999999999999998776
Q ss_pred -----------------------------------------ceEEEEecCCCCCCceeeCc-------------------
Q psy3152 62 -----------------------------------------LYSMFILNRNSPENLLEPVV------------------- 81 (402)
Q Consensus 62 -----------------------------------------~y~liILNR~s~eNfie~It------------------- 81 (402)
+||||||||++++||+++|+
T Consensus 98 ~~~~~g~~~~~~~~~~~~~~~~~~~s~~~~~~~~l~~~d~y~yglIILNR~npeNfs~~I~pn~v~n~r~~f~~~~~~~~ 177 (231)
T 1q67_A 98 IQVNNGSDNSNRNSSGNGNSYKSNDSLTYNCGKTLSGKDIYNYGLIILNRINPDNFSMGIVPNSVVNKRKVFNAEEDTLN 177 (231)
T ss_dssp -------------------------------------CCCCSEEEEEEESSSSCEEEEEECCHHHHHHHHHHCHHHHHHS
T ss_pred cccccccccccccccccccccccccccccccccccccccccceeEEEEecCCcccceeeccccccccccccccccccccC
Confidence 69999999999999999998
Q ss_pred --CcceeEEeCCEEEEEcCCCcEEEEEeeccchhHHHHHHHHHHHHHhh
Q psy3152 82 --KELDLQLQNPFILYKNKQGLIYGIWFYNKEDCHRISDILQSLVKELT 128 (402)
Q Consensus 82 --~~le~elq~~fLiyRn~~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~ 128 (402)
+.++||++++|||||+..++|||||||+++||++|+++|++|++...
T Consensus 178 ~l~~m~vEv~d~lvI~kn~~~eVyGIWih~~~Dr~~I~eLik~llene~ 226 (231)
T 1q67_A 178 PLECMGVEVKDELVIIKNLKHEVYGIWIHTVSDRQNIYELIKYLLENEP 226 (231)
T ss_dssp CCCCCEEEEETTEEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHSCS
T ss_pred cccccceEecCCEEEEEcCCCcEEEEEEccHHHHHHHHHHHHHHHhcCc
Confidence 45799999999999999999999999999999999999988776543
No 4
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=99.69 E-value=7.3e-18 Score=123.54 Aligned_cols=40 Identities=40% Similarity=0.592 Sum_probs=32.0
Q ss_pred CCCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhhhhhhhc
Q psy3152 362 IEPLTKNQIVQAVSHLLKHDADFVNKLHEAYLNSFKDVVS 401 (402)
Q Consensus 362 ~~~l~~~ql~~a~~~li~~d~~f~~~~heay~~~~~~~~~ 401 (402)
+++|||+||+|||+||||||++|+++||||||+||+++|.
T Consensus 6 ~~~Ltk~Ql~qal~hLiknD~~Fl~~iHeAYl~sl~~~l~ 45 (46)
T 2wx4_A 6 DLLLNSTQFVQAFTYLIQNDKEFANKLHKAYLNGCSNLLL 45 (46)
T ss_dssp GGSTTSHHHHHHHHHHHHHCTTHHHHHHHHHHC-------
T ss_pred cccCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999874
No 5
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=99.65 E-value=1.1e-17 Score=124.88 Aligned_cols=41 Identities=32% Similarity=0.519 Sum_probs=35.2
Q ss_pred CCCCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhhhhhhhc
Q psy3152 361 HIEPLTKNQIVQAVSHLLKHDADFVNKLHEAYLNSFKDVVS 401 (402)
Q Consensus 361 ~~~~l~~~ql~~a~~~li~~d~~f~~~~heay~~~~~~~~~ 401 (402)
++++|||+||+|||+||||||++||++||||||+||++.++
T Consensus 7 ~~~~Ltk~Ql~qaLihLIqnD~~Fl~~IHeAYl~sl~~~~~ 47 (51)
T 2wx3_A 7 LSIILSKSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNKD 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTC----
T ss_pred CcCccCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHh
Confidence 44689999999999999999999999999999999998765
No 6
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=97.32 E-value=0.0018 Score=54.84 Aligned_cols=99 Identities=14% Similarity=0.322 Sum_probs=75.0
Q ss_pred CCcEEEEEeeCCCCCccccCce-ee--EEEEEeCCCCceEEEEecCCCCCCce-eeCcCcceeE-EeCCEEEEEcCCCcE
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIE-GA--LFVYRRVESPLYSMFILNRNSPENLL-EPVVKELDLQ-LQNPFILYKNKQGLI 102 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIE-Gt--LFVy~Rs~~P~y~liILNR~s~eNfi-e~It~~le~e-lq~~fLiyRn~~~~I 102 (402)
++-|.||.+|+.++.|.+.+-. |. +-+|+....-.|.|+..-=.+..-.+ -.|.+++.+. ...-|.-||.++ .+
T Consensus 8 ~~~A~V~~~d~~~~~W~p~~~~~g~s~V~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p~Fh~w~~~~-~~ 86 (112)
T 1evh_A 8 QARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDAR-QV 86 (112)
T ss_dssp EEEEEEEEEETTTTEEEEGGGCCSCEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBCCSSSEEEEECSS-CE
T ss_pred EEEEEEEEEcCCCCceEECCCCCCceEEEEEEECCCCEEEEEEEECCCCcEEEeeEecCCceEEecCccceeEecCC-EE
Confidence 4568999999999999999974 44 78888866656766554322333222 3588899885 555577889875 89
Q ss_pred EEEEeeccchhHHHHHHHHHHHHHh
Q psy3152 103 YGIWFYNKEDCHRISDILQSLVKEL 127 (402)
Q Consensus 103 yGIWFyd~ed~~rI~~ll~~lv~~~ 127 (402)
|||=|-+++|...+.+.+.+.++.+
T Consensus 87 ~GLnF~se~eA~~F~~~v~~al~~l 111 (112)
T 1evh_A 87 YGLNFGSKEDANVFASAMMHALEVL 111 (112)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998888765
No 7
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=97.30 E-value=0.0033 Score=54.18 Aligned_cols=100 Identities=13% Similarity=0.298 Sum_probs=69.9
Q ss_pred CCcEEEEEeeCCCCCccccCceeeE-----EEEEeCCCCceEEEEecCC--CCCCc-eeeCcCcceeE-EeCCEEEEEcC
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEGAL-----FVYRRVESPLYSMFILNRN--SPENL-LEPVVKELDLQ-LQNPFILYKNK 98 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEGtL-----FVy~Rs~~P~y~liILNR~--s~eNf-ie~It~~le~e-lq~~fLiyRn~ 98 (402)
..-|.||.||+.+++|.+.+ .|.+ -|+.-.. .|.|=|.-|+ +..-. -..|.+++++. ..+-|.-|+.+
T Consensus 8 ~~~A~V~~~d~~~~~W~~~g-~G~~~l~~V~i~~~~~--~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~~~~~Fh~w~~~ 84 (130)
T 1qc6_A 8 QARASVMVYDDTSKKWVPIK-PGQQGFSRINIYHNTA--SSTFRVVGVKLQDQQVVINYSIVKGLKYNQATPTFHQWRDA 84 (130)
T ss_dssp EEEEEEEEEETTTTEEEECC------CEEEEEEEETT--TTEEEEEEECTTTCCEEEEEECCTTCEEEEEETTEEEEECS
T ss_pred EEEEEEEEECCCCCceeECC-CCceeeeEEEEEecCC--CcEEEEEEEeCCCCeEEEeeEEeCCcEEeccCCeeEEEEcC
Confidence 34688999999999999998 6633 3344443 3444444443 32222 23689999885 66668889887
Q ss_pred CCcEEEEEeeccchhHHHHHHHHHHHHHhhcCC
Q psy3152 99 QGLIYGIWFYNKEDCHRISDILQSLVKELTHTP 131 (402)
Q Consensus 99 ~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~~~~ 131 (402)
.++|||=|-+++|...+.+.+.+.++.+.+..
T Consensus 85 -~~~~GL~F~se~eA~~F~~~~~~al~~~~~~~ 116 (130)
T 1qc6_A 85 -RQVYGLNFASKEEATTFSNAMLFALNIMNSQE 116 (130)
T ss_dssp -SCEEEEEESCHHHHHHHHHHHHHHHHHTC---
T ss_pred -CEEEEEecCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999877654
No 8
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=97.29 E-value=0.002 Score=54.78 Aligned_cols=100 Identities=11% Similarity=0.302 Sum_probs=77.1
Q ss_pred CCcEEEEEeeCCCCCccccCc--ee--eEEEEEeCCCCceEEEEecCCCCCCcee--eCcCcceeE-EeCCEEEEEcCCC
Q psy3152 28 ATHVALYSFNGHKSEWDKTNI--EG--ALFVYRRVESPLYSMFILNRNSPENLLE--PVVKELDLQ-LQNPFILYKNKQG 100 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdI--EG--tLFVy~Rs~~P~y~liILNR~s~eNfie--~It~~le~e-lq~~fLiyRn~~~ 100 (402)
+.-|.||.+|+.++.|.+.+. +| ++-+|+....-.|.|+..-=.+..-.+. .|.+++.+. ...-|.-||.++
T Consensus 8 ~~~A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~~~p~FH~w~~~~- 86 (115)
T 1egx_A 8 SSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRDAR- 86 (115)
T ss_dssp EEEEECBEECTTTSSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCCSSTTEEEEESSS-
T ss_pred EEEEEEEEEcCCCCceeECCCCCCCccEEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEcCCceEEecCccceEEecCC-
Confidence 456889999999999999997 68 4888888766667665543331333333 588899885 555677889875
Q ss_pred cEEEEEeeccchhHHHHHHHHHHHHHhh
Q psy3152 101 LIYGIWFYNKEDCHRISDILQSLVKELT 128 (402)
Q Consensus 101 ~IyGIWFyd~ed~~rI~~ll~~lv~~~~ 128 (402)
.+|||=|-+++|...+.+.+.+.++.+.
T Consensus 87 ~~~GLnF~se~eA~~F~~~v~~al~~l~ 114 (115)
T 1egx_A 87 QVWGLNFGSKEDAAQFAAGMASALEALE 114 (115)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999998887764
No 9
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=97.16 E-value=0.0035 Score=53.80 Aligned_cols=102 Identities=10% Similarity=0.306 Sum_probs=76.5
Q ss_pred CCcEEEEEeeCCCC-CccccCc-eeeEEEEEeCCCCceEEEEecCCCCCCce-eeCcCcceeE-EeCCEEEEEcCC-CcE
Q psy3152 28 ATHVALYSFNGHKS-EWDKTNI-EGALFVYRRVESPLYSMFILNRNSPENLL-EPVVKELDLQ-LQNPFILYKNKQ-GLI 102 (402)
Q Consensus 28 AshVvVY~Fd~~tn-eWeKtdI-EGtLFVy~Rs~~P~y~liILNR~s~eNfi-e~It~~le~e-lq~~fLiyRn~~-~~I 102 (402)
+.-|.||.||+.++ .|.+.+- .|.+.+|.......|+|+=+ ++..-.+ -.|++++.+. ....|.-||.++ ..+
T Consensus 8 ~~rA~V~~~D~~tk~~W~p~g~~~~~V~~~~d~~~~~yRIv~~--~~~~vv~n~~i~~~l~y~~a~p~FhqW~d~~~~~~ 85 (120)
T 1ddw_A 8 STRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISL--DGSKAIINSTITPNMTFTKTSQKFGQWADSRANTV 85 (120)
T ss_dssp EEEEEEEEECTTTSCSEEESCSSCEEEEEEEETTTTEEEEEEE--ETTEEEEEEECCTTCCCEECSSSEEEEEETTTTEE
T ss_pred EEEEEEEEEcCCCCCceEeCCCCceEEEEEEcCCCCEEEEEEc--cCCEEEEeCEecCCcEEeeCCccccEEEcCCCcEE
Confidence 35688999999885 9999443 46777777776667887653 3333333 2588999885 555577999776 799
Q ss_pred EEEEeeccchhHHHHHHHHHHHHHhhcCC
Q psy3152 103 YGIWFYNKEDCHRISDILQSLVKELTHTP 131 (402)
Q Consensus 103 yGIWFyd~ed~~rI~~ll~~lv~~~~~~~ 131 (402)
|||=|-+++|...+...+.+.++.+....
T Consensus 86 ~GLnF~s~~eA~~F~~~~~~~~~~l~~~~ 114 (120)
T 1ddw_A 86 YGLGFSSEHHLSKFAEKFQEFKEAARLAK 114 (120)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHC---
T ss_pred EEeccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998877543
No 10
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=97.07 E-value=0.0062 Score=55.34 Aligned_cols=99 Identities=10% Similarity=0.329 Sum_probs=75.1
Q ss_pred CCcEEEEEeeCCCC-CccccCc-eeeEEEEEeCCCCceEEEEecCCCCCCcee-eCcCccee-EEeCCEEEEEcCC-CcE
Q psy3152 28 ATHVALYSFNGHKS-EWDKTNI-EGALFVYRRVESPLYSMFILNRNSPENLLE-PVVKELDL-QLQNPFILYKNKQ-GLI 102 (402)
Q Consensus 28 AshVvVY~Fd~~tn-eWeKtdI-EGtLFVy~Rs~~P~y~liILNR~s~eNfie-~It~~le~-elq~~fLiyRn~~-~~I 102 (402)
+.-|.||.||+.++ .|.+.+- .|.+-||.....-.|+||=+ ++..-.++ .|++++.+ .....|.-||.++ ..+
T Consensus 13 s~rA~Vm~~D~~tk~~WvP~g~~~~~V~i~~d~~rnsyRIvg~--~d~kvvinc~I~~~l~Y~kasp~FHqW~d~~~~~v 90 (168)
T 1i2h_A 13 STRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISL--DGSKAIINSTITPNMTFTKTSQKFGQWADSRANTV 90 (168)
T ss_dssp EEEEEEEEECTTSSCCSEESCSSCEEEEEEEETTTTEEEEEEE--ETTEEEEEEECCTTCCEEEEETTEEEEEETTTTEE
T ss_pred EEEEEEEEECCCCCCceeecCCCCeEEEEEEcCCCCEEEEEEc--cCCEEEEecEecCCcEEeeCCcccceeecCCCcEE
Confidence 45689999998876 9999553 45666777766666877654 33333332 58899988 4667788999876 799
Q ss_pred EEEEeeccchhHHHHHHHHHHHHHhh
Q psy3152 103 YGIWFYNKEDCHRISDILQSLVKELT 128 (402)
Q Consensus 103 yGIWFyd~ed~~rI~~ll~~lv~~~~ 128 (402)
|||=|-+++|...+...|.+.++.+.
T Consensus 91 ~GLnF~Se~eA~~F~~~~~~ale~l~ 116 (168)
T 1i2h_A 91 YGLGFSSEHHLSKFAEKFQEFKEAAR 116 (168)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987777655
No 11
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=96.73 E-value=0.018 Score=49.19 Aligned_cols=101 Identities=10% Similarity=0.191 Sum_probs=71.7
Q ss_pred CCcEEEEEeeCCCCCccccCcee--eEEEEEeC-----CCCceEEEEecCCCCCCce-eeCcCccee-EEeCCEEEEEcC
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEG--ALFVYRRV-----ESPLYSMFILNRNSPENLL-EPVVKELDL-QLQNPFILYKNK 98 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEG--tLFVy~Rs-----~~P~y~liILNR~s~eNfi-e~It~~le~-elq~~fLiyRn~ 98 (402)
+.-|.||.+|+.++.|.+.+--| .+.||... ..-.|.|+...=.+..-.+ -.|.+++.+ +....|.-||.+
T Consensus 8 ~~~A~V~~~d~~~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p~Fh~w~~~ 87 (118)
T 1xod_A 8 RVRAVVMTRDDSSGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKVTPTFHHWRIG 87 (118)
T ss_dssp EEEEEEEEECSSSSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEEETTEEEEEET
T ss_pred EEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEecCCcceEEEeC
Confidence 45689999999999999988644 25666542 2223555443312332222 258899987 566778899986
Q ss_pred CCcEEEEEeeccchhHHHHHHHHHHHHHhhc
Q psy3152 99 QGLIYGIWFYNKEDCHRISDILQSLVKELTH 129 (402)
Q Consensus 99 ~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~~ 129 (402)
..+|||=|-+++|+..+.+.+.+-++.+.+
T Consensus 88 -~~~~GL~F~se~eA~~F~~~v~~al~~l~~ 117 (118)
T 1xod_A 88 -DKKFGLTFQSPADARAFDRGIRRAIEDLSQ 117 (118)
T ss_dssp -TEEEEEEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred -CEEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999988877654
No 12
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=96.69 E-value=0.014 Score=50.55 Aligned_cols=100 Identities=13% Similarity=0.170 Sum_probs=71.9
Q ss_pred CCcEEEEEeeCCCCCccccCceee--EEEEEeC---CCCc--eEEEEecCCCCCCce-eeCcCccee-EEeCCEEEEEcC
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEGA--LFVYRRV---ESPL--YSMFILNRNSPENLL-EPVVKELDL-QLQNPFILYKNK 98 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEGt--LFVy~Rs---~~P~--y~liILNR~s~eNfi-e~It~~le~-elq~~fLiyRn~ 98 (402)
+.-|.||.+|+.++.|.+.+--|. .-||... ..++ |.|+..-=.+..-.+ -.|.+++.+ +....|.-||.+
T Consensus 17 ~~~A~Vm~~D~~~~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~~~p~FH~w~~~ 96 (126)
T 2jp2_A 17 RVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANPTFHHWKVD 96 (126)
T ss_dssp EEEEEEEEECTTSSSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEEEETTEEEEECS
T ss_pred EEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEecCCcceEEEcC
Confidence 567899999999999999886442 4566543 3343 544433312322222 358899988 466778899987
Q ss_pred CCcEEEEEeeccchhHHHHHHHHHHHHHhh
Q psy3152 99 QGLIYGIWFYNKEDCHRISDILQSLVKELT 128 (402)
Q Consensus 99 ~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~ 128 (402)
+ .+|||=|-+++|...+.+.+.+.++.+.
T Consensus 97 ~-~~~GLnF~se~eA~~F~~~v~~al~~l~ 125 (126)
T 2jp2_A 97 N-RKFGLTFQSPADARAFDRGVRKAIEDLI 125 (126)
T ss_dssp S-SEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred C-EEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 5 7799999999999999999998888765
No 13
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=95.86 E-value=0.12 Score=45.16 Aligned_cols=103 Identities=12% Similarity=0.215 Sum_probs=78.5
Q ss_pred CCcEEEEEeeCCCCCccccCcee--eEEEEEeCCC---CceEEEEecCCC-CCCcee--eCcCccee-EEeCCEEEEEcC
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEG--ALFVYRRVES---PLYSMFILNRNS-PENLLE--PVVKELDL-QLQNPFILYKNK 98 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEG--tLFVy~Rs~~---P~y~liILNR~s-~eNfie--~It~~le~-elq~~fLiyRn~ 98 (402)
..-|.|..||+.++.|.-.+=.| ..+||..... -+..+.|.-|+- -..+++ .|.+++.+ +....|=-+|..
T Consensus 15 ~~rA~Vm~~Dd~tk~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynkatp~FHqWrd~ 94 (130)
T 3syx_A 15 RVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVTPTFHHWKID 94 (130)
T ss_dssp EEEEEEEEECSSSSCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEEEETTEEEEEET
T ss_pred EEEEEeeeEcCCCCceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEeccccccccccc
Confidence 45689999999999999987433 4678885322 234455555533 223444 58999998 688889999987
Q ss_pred CCcEEEEEeeccchhHHHHHHHHHHHHHhhcCC
Q psy3152 99 QGLIYGIWFYNKEDCHRISDILQSLVKELTHTP 131 (402)
Q Consensus 99 ~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~~~~ 131 (402)
+ .+|||=|-+++|...+.+-|.+.++.+....
T Consensus 95 ~-~~yGL~F~S~~dA~~F~~~~~~Al~~L~~g~ 126 (130)
T 3syx_A 95 D-KKFGLTFQSPADARAFDRGIRRAIEDISQGC 126 (130)
T ss_dssp T-EEEEEEESSHHHHHHHHHHHHHHHHGGGSCC
T ss_pred C-eEeecccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 5 8899999999999999999999998887654
No 14
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=95.24 E-value=0.14 Score=46.48 Aligned_cols=101 Identities=13% Similarity=0.221 Sum_probs=76.0
Q ss_pred CCcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCC-CceeeCcCcceeEEeCC-EEEEEcCCCcEEEE
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPE-NLLEPVVKELDLQLQNP-FILYKNKQGLIYGI 105 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~e-Nfie~It~~le~elq~~-fLiyRn~~~~IyGI 105 (402)
++-|-||.-+. .+.|.+. ..|.|-+++-...--|-|=|...++.. -|-..|..++++...-+ |..++ +..+++||
T Consensus 62 taVaqLy~a~~-~~~W~~~-~~Gal~~vkD~~~rsyf~RlvDl~~~~vvweqELY~~f~Y~~~r~~FHtFe-~d~c~~GL 138 (169)
T 2ifs_A 62 SAVVQLYAADR-NCMWSKK-CSGVACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFA-GDTCQVAL 138 (169)
T ss_dssp EEEEEEEEEET-TTEEEEE-EEEEEEEEEETTTTEEEEEEEETTTCCCCEEEECCSSCCCBCCCSSEEEEE-CSSSEEEE
T ss_pred EEEEEEEEECC-CCeeEec-CceEEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEee-cCCcEEEE
Confidence 56677999975 4799996 799999998776555655555555443 44457889998865545 55677 46899999
Q ss_pred EeeccchhHHHHHHHHHHHHHhhcCC
Q psy3152 106 WFYNKEDCHRISDILQSLVKELTHTP 131 (402)
Q Consensus 106 WFyd~ed~~rI~~ll~~lv~~~~~~~ 131 (402)
=|.+++|+..+.+.+...+....+..
T Consensus 139 nFade~EA~~F~~~V~~~l~~~~~~~ 164 (169)
T 2ifs_A 139 NFANEEEAKKFRKAVTDLLGRRQRKS 164 (169)
T ss_dssp ECSCHHHHHHHHHHHHHHHHHCSCCC
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999998888777765553
No 15
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=95.21 E-value=0.11 Score=46.32 Aligned_cols=100 Identities=13% Similarity=0.227 Sum_probs=74.3
Q ss_pred CCcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCC-CceeeCcCcceeEEeCC-EEEEEcCCCcEEEE
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPE-NLLEPVVKELDLQLQNP-FILYKNKQGLIYGI 105 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~e-Nfie~It~~le~elq~~-fLiyRn~~~~IyGI 105 (402)
++-|-||.-+. .+.|.+. ..|.+-+++-...-.|-|=|...++.. -|-..|..++++...-+ |..|.. ..+++||
T Consensus 45 taVaqLy~a~~-~~~W~~~-~~Gal~~VkD~~~rsyf~RlvDl~~~~viweqELY~~f~Y~~~r~~FHtFe~-d~c~~GL 121 (152)
T 1mke_A 45 SAVVQLYAADR-NCMWSKK-CSGVACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAG-DTCQVAL 121 (152)
T ss_dssp EEEEEEEEEET-TTEEEEE-EEEEEEEEEETTTTEEEEEEECSSSCSEEEEEECCSSCCCBCSSSSEEEEEC-SSSEEEE
T ss_pred EeeEEEEEECC-CCceEec-CceEEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEEec-CCcEEEE
Confidence 55677999975 4799996 799999998876555655566665544 33356888898865555 456665 6899999
Q ss_pred EeeccchhHHHHHHHHHHHHHhhcC
Q psy3152 106 WFYNKEDCHRISDILQSLVKELTHT 130 (402)
Q Consensus 106 WFyd~ed~~rI~~ll~~lv~~~~~~ 130 (402)
=|.+++|+..+.+.+.+.+....+.
T Consensus 122 nFade~EA~~F~~~V~~~l~~~~~~ 146 (152)
T 1mke_A 122 NFANEEEAKKFRKAVTDLLGRRQRK 146 (152)
T ss_dssp EESSHHHHHHHHHHHHHHHHHCC--
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999888777666544
No 16
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=93.72 E-value=0.44 Score=41.13 Aligned_cols=100 Identities=15% Similarity=0.218 Sum_probs=69.6
Q ss_pred CcEEEEEeeCCCCCccccCceeeEEEEEeCC-CCceEEEEecCCCCCCceee--CcCcceeEEeC----CEEEEE---cC
Q psy3152 29 THVALYSFNGHKSEWDKTNIEGALFVYRRVE-SPLYSMFILNRNSPENLLEP--VVKELDLQLQN----PFILYK---NK 98 (402)
Q Consensus 29 shVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~-~P~y~liILNR~s~eNfie~--It~~le~elq~----~fLiyR---n~ 98 (402)
..|-||.||..+++|...|+ |.|-|..... .-+++| ||=|.+.-.++.. |.+++.++... .|+-+. .+
T Consensus 16 ~raKL~~f~~~~~~WkerG~-G~lkil~~k~~~~k~Rl-lmR~d~~~kv~lN~~i~~~m~~~~~~~~~~~~v~~~~~~dg 93 (130)
T 3n7c_A 16 EKAKLLIFDSDTKGYTSRGV-GELKLLRKKDDKGKVRV-LCRSEGMGHVLLNTSVVKSFKYQPIDADNENLIKWPIITDG 93 (130)
T ss_dssp EEEEEEEECC---CEEEEEE-EEEEEEEETTEEEEEEE-EEEC-CCCCEEEEEECCTTBCCEESCTTCTTEEEEEEEETT
T ss_pred EEEEEEEEeCCCCCchhcce-EEEEEEEecCCCCEEEE-EEEecCCceEEeeccccCCcEEeEcCCCCccEEEEEecCCC
Confidence 45889999988899998774 8999987653 345664 4445556666654 88898888763 566544 23
Q ss_pred CCcEEEEEeeccchhHHHHHHHHHHHHHhhcC
Q psy3152 99 QGLIYGIWFYNKEDCHRISDILQSLVKELTHT 130 (402)
Q Consensus 99 ~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~~~ 130 (402)
.-+.|.|=|-+.++++.+.+.|.++.+....+
T Consensus 94 k~~~~~lrfks~e~A~~f~~~iee~~~~~~~~ 125 (130)
T 3n7c_A 94 KLETFIIKVKQKADGRRLVGAVADAQQAMEGH 125 (130)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHHHHC---
T ss_pred ceEEEEEEECCHHHHHHHHHHHHHHHhhhccc
Confidence 34789999999999999999999887765543
No 17
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=93.70 E-value=0.65 Score=39.76 Aligned_cols=101 Identities=14% Similarity=0.247 Sum_probs=74.5
Q ss_pred CcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCcee--eCcCcceeEEe---CCEEEEE-----cC
Q psy3152 29 THVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLE--PVVKELDLQLQ---NPFILYK-----NK 98 (402)
Q Consensus 29 shVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie--~It~~le~elq---~~fLiyR-----n~ 98 (402)
..|-||.||..+++|.-.|+ |.|.|......-+++|++ =|.+.-.++. .|.+++.++.. +.-+.|. .+
T Consensus 13 ~raKL~~~~~~~~~WkERG~-G~lkil~~k~~~k~Rlvm-R~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~ 90 (130)
T 1xke_A 13 QRVKLFRFDAEVSQWKERGL-GNLKILKNEVNGKLRMLM-RREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDG 90 (130)
T ss_dssp EEEEEEEEETTTTEEEEEEE-EEEEEEEETTSSCEEEEE-EETTTTEEEEEEECCTTSCEEECTTCSSCEEEEEEECSSS
T ss_pred EEEEEEEEcCCCCCcccCcE-EEEEEEEcCCCCeEEEEE-EEcCCCeEEEecEeCCCcEEeecCCCCeEEEEEecccCCC
Confidence 45889999988899999886 899999876666676654 4444555554 48889988764 3344443 11
Q ss_pred --CCcEEEEEeeccchhHHHHHHHHHHHHHhhcCC
Q psy3152 99 --QGLIYGIWFYNKEDCHRISDILQSLVKELTHTP 131 (402)
Q Consensus 99 --~~~IyGIWFyd~ed~~rI~~ll~~lv~~~~~~~ 131 (402)
.-+.|.|=|-+.++++.+.+.|.++.+.+...+
T Consensus 91 ~~~~~~~~irfks~e~a~~f~~~~ee~k~~~~~~~ 125 (130)
T 1xke_A 91 DAKLEQLAAKFKTPELAEEFKQKFEECQRLLLDIP 125 (130)
T ss_dssp CSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCceEEEEEEECCHHHHHHHHHHHHHHHHHhhccC
Confidence 247899999999999999999998888776544
No 18
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=93.32 E-value=0.96 Score=39.24 Aligned_cols=95 Identities=9% Similarity=0.155 Sum_probs=68.9
Q ss_pred CcEEEEEeeCCCCCccccCceeeEEEEEeCC----CCceEEEEecCCCCCCcee--eCcCcceeEEe-CCEEEEEc----
Q psy3152 29 THVALYSFNGHKSEWDKTNIEGALFVYRRVE----SPLYSMFILNRNSPENLLE--PVVKELDLQLQ-NPFILYKN---- 97 (402)
Q Consensus 29 shVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~----~P~y~liILNR~s~eNfie--~It~~le~elq-~~fLiyRn---- 97 (402)
..|-||.||..+++|...|+ |.|.|..... .-+++|+ |=|.+.-.++. .|.+++.++.. +.++.|..
T Consensus 20 ~raKL~~f~~~~~~WkERG~-G~lkil~~k~~~~~t~k~Rlv-mR~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~ 97 (138)
T 2y8g_A 20 MQCKLFVFDKTSQSWVAVGR-GLLRLNDMASTDDGTLQSRLV-MRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTE 97 (138)
T ss_dssp EEEEEEEEETTTTEEEEEEE-EEEEEEEEECTTTCCEEEEEE-EEETTTCCEEEEEECCTTCCEEEEETTEEEEECCC--
T ss_pred EEeEEEEEecCCCCchhceE-EEEEEEEeccCCCCCccEEEE-EEEcCcceEEEeeEecCCceeecCCCCEEEEEEecCC
Confidence 35889999988899999997 9999988642 1245554 44444556665 48899998864 78888873
Q ss_pred -CCCcEEEEEeeccchhHHHHHHHHHHHH
Q psy3152 98 -KQGLIYGIWFYNKEDCHRISDILQSLVK 125 (402)
Q Consensus 98 -~~~~IyGIWFyd~ed~~rI~~ll~~lv~ 125 (402)
+.-.+|.|=|-+.++.+....+..++..
T Consensus 98 d~~~~~~lirfk~~e~a~lf~~~~~~i~~ 126 (138)
T 2y8g_A 98 DQGVKVFLISASSKDTGQLYAALHHRILA 126 (138)
T ss_dssp CCCCCEEEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCHHHHHHHHHHHHHHHH
Confidence 2357999999999888666655555543
No 19
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=92.17 E-value=1.4 Score=40.61 Aligned_cols=100 Identities=14% Similarity=0.346 Sum_probs=73.9
Q ss_pred CCcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCceee--CcCcceeEEe---CCEEEEE---c-C
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLEP--VVKELDLQLQ---NPFILYK---N-K 98 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie~--It~~le~elq---~~fLiyR---n-~ 98 (402)
...|-||.|+..+++|.-.|+ |.|.|......-+++| ||=|.+.-.++.. |++++.++.. +.-++|- + .
T Consensus 78 ~~RaKLf~f~~~~~~WKERGv-G~lkilk~ket~k~Rl-lMR~d~~~kV~LN~~I~~~m~~~~~~~sdks~v~~~~~D~s 155 (191)
T 3m1i_B 78 KVRAKLFRFDADAKEWKERGT-GDCKFLKNKKTNKVRI-LMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIA 155 (191)
T ss_dssp EEEEEEEEEETTTTEEEEEEE-EEEEEEEETTTCCEEE-EEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECT
T ss_pred EEeeEEEEEecCCCCccceeE-EEEEEEEcCCCCeEEE-EEEecCcceEEEeeecCCCcEEeECCCCCceEEEEecCcCC
Confidence 357899999988899998886 8899887765556764 5555566777765 8899988875 3344443 1 2
Q ss_pred CC----cEEEEEeeccchhHHHHHHHHHHHHHhhc
Q psy3152 99 QG----LIYGIWFYNKEDCHRISDILQSLVKELTH 129 (402)
Q Consensus 99 ~~----~IyGIWFyd~ed~~rI~~ll~~lv~~~~~ 129 (402)
.+ ..|.|=|-+.++++.+...|.++.+...+
T Consensus 156 dge~k~e~~aIRFk~~E~A~eF~~~~eeaq~~nkk 190 (191)
T 3m1i_B 156 EGEAEAFTFAIRFGSKENADKFKEEFEKAQEINKK 190 (191)
T ss_dssp TSSCEEEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcceEEEEEEECCHHHHHHHHHHHHHHHHHhhc
Confidence 23 57999999999999999999888776543
No 20
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=92.11 E-value=1.8 Score=37.85 Aligned_cols=99 Identities=13% Similarity=0.316 Sum_probs=72.5
Q ss_pred CCcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCceee--CcCcceeEEe---CCEEEEE---c-C
Q psy3152 28 ATHVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLEP--VVKELDLQLQ---NPFILYK---N-K 98 (402)
Q Consensus 28 AshVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie~--It~~le~elq---~~fLiyR---n-~ 98 (402)
...|-||.|+..+++|...|+ |.|.|......-+++ +||=|.+.-..+.. |.+++.++.. +.-++|- + .
T Consensus 27 ~~raKLf~f~~~~~~WkerG~-G~lkilk~k~~~k~R-llmR~d~~~kv~lN~~i~~~m~~~~~~~s~k~~v~~~~~D~s 104 (140)
T 4hat_B 27 KVRAKLFRFDKDAKEWKERGT-GDCKFLKNKKTNKVR-ILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIA 104 (140)
T ss_dssp EEEEEEEEEETTTTEEEEEEE-EEEEEEEETTTCCEE-EEEECTTTCCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECT
T ss_pred EEeEEEEEEcCCCCCcccccE-EEEEEEEcCCCCeEE-EEEEecCcceEEEEeEecCCeEEeEcCCCCceEEEEccccCC
Confidence 345889999988899988876 899998766555676 45555666777764 8899888865 2333332 2 1
Q ss_pred C----CcEEEEEeeccchhHHHHHHHHHHHHHhh
Q psy3152 99 Q----GLIYGIWFYNKEDCHRISDILQSLVKELT 128 (402)
Q Consensus 99 ~----~~IyGIWFyd~ed~~rI~~ll~~lv~~~~ 128 (402)
. .+.|.|=|-+.++++.+.+.+.++.++..
T Consensus 105 dg~~~~~~~~iRfk~~e~A~~f~~~~ee~~~~n~ 138 (140)
T 4hat_B 105 EGEAEAFTFAIRFGSKENADKFKEEFEKAQEINK 138 (140)
T ss_dssp TSSCEEEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEEECCHHHHHHHHHHHHHHHHHhc
Confidence 2 25799999999999999999988877654
No 21
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=91.93 E-value=1.1 Score=39.40 Aligned_cols=96 Identities=9% Similarity=0.158 Sum_probs=68.7
Q ss_pred CcEEEEEeeCCCCCccccCceeeEEEEEeCC----CCceEEEEecCCCCCCcee--eCcCcceeEE-eCCEEEEE--c--
Q psy3152 29 THVALYSFNGHKSEWDKTNIEGALFVYRRVE----SPLYSMFILNRNSPENLLE--PVVKELDLQL-QNPFILYK--N-- 97 (402)
Q Consensus 29 shVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~----~P~y~liILNR~s~eNfie--~It~~le~el-q~~fLiyR--n-- 97 (402)
..|-||.||..+++|.-.|+ |.|.|..... .-+++|++ =|.+.-.++. .|.+++.++. .+.++.|. +
T Consensus 32 ~raKL~~fd~~~~~WkERG~-G~lkil~~k~~~~~t~k~Rlvm-R~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~ 109 (150)
T 2crf_A 32 MQCKLFVFDKTSQSWVERGR-GLLRLNDMASTDDGTLQSRLVM-RTQGSLRLILNTKLWAQMQIDKASEKSIHITAMDTE 109 (150)
T ss_dssp EEEEEEEEETTTTEEEEEEE-EEEEEEEEECSSSCSEEEEEEE-EESSSCCEEEEEECCTTCCEECCSSSEEEEEEEBSS
T ss_pred EEeEEEEEcCCCCCccccee-EEEEEEeccccCCCCccEEEEE-EEcCcceEEeeeeccCCceeecCCCCEEEEEeecCC
Confidence 35899999998999998875 8898887542 23565544 3444555554 4888888874 47788887 3
Q ss_pred -CCCcEEEEEeeccchhHHHHHHHHHHHHH
Q psy3152 98 -KQGLIYGIWFYNKEDCHRISDILQSLVKE 126 (402)
Q Consensus 98 -~~~~IyGIWFyd~ed~~rI~~ll~~lv~~ 126 (402)
+.-.+|.|=|-+.++++.+..+..+|...
T Consensus 110 d~~~~~~lirfk~~e~a~lf~~~~e~i~~l 139 (150)
T 2crf_A 110 DQGVKVFLISASSKDTGQLYAALHHRILAL 139 (150)
T ss_dssp SCCEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCHHHHHHHHHHHHHHHHH
Confidence 23468999999999998777666666543
No 22
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=90.71 E-value=1.2 Score=38.31 Aligned_cols=92 Identities=14% Similarity=0.292 Sum_probs=66.4
Q ss_pred CcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCcee--eCcCcceeEEe---CCEEEEEc-----C
Q psy3152 29 THVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLE--PVVKELDLQLQ---NPFILYKN-----K 98 (402)
Q Consensus 29 shVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie--~It~~le~elq---~~fLiyRn-----~ 98 (402)
..|-||.||..+++|...|+ |.|.|......-.++|+ |=|.+...++. .|.+++.++.. +..+.|-. +
T Consensus 27 ~raKL~~~~~~~~~WkerG~-G~lkil~~k~~~k~Rlv-mR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~~~~~~d~~d~ 104 (134)
T 1rrp_B 27 NRAKLFRFDVESKEWKERGI-GNVKILRHKTSGKIRLL-MRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADE 104 (134)
T ss_dssp EEEEEEEECSSSSCEEEEEE-EEEEEEEESSSCCCEEE-EECTTTCCEEECCBCCSSCCCBCSTTCTTEEEEEEEECTTS
T ss_pred EEEEEEEEcccCCCcccCcE-EEEEEEEECCCCeEEEE-EEEcCCCcEEEEeEecCCceEeecCCCCeEEEEEcccccCC
Confidence 45889999988999999886 89998876555566654 44445555555 47888888754 34565531 1
Q ss_pred --CCcEEEEEeeccchhHHHHHHHHH
Q psy3152 99 --QGLIYGIWFYNKEDCHRISDILQS 122 (402)
Q Consensus 99 --~~~IyGIWFyd~ed~~rI~~ll~~ 122 (402)
..+.|.|=|-+.++++.+.+.|.+
T Consensus 105 ~~k~~~~~irfk~~e~A~~f~~~~~e 130 (134)
T 1rrp_B 105 LPKPEQLAIRFKTPEEAALFKCKFEE 130 (134)
T ss_dssp SCEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCHHHHHHHHHHHHH
Confidence 237899999999999998877764
No 23
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=90.52 E-value=1.9 Score=39.91 Aligned_cols=102 Identities=14% Similarity=0.317 Sum_probs=74.1
Q ss_pred CcEEEEEe--eCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCcee--eCcCcceeEEe---CCEEEE---Ec-
Q psy3152 29 THVALYSF--NGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLE--PVVKELDLQLQ---NPFILY---KN- 97 (402)
Q Consensus 29 shVvVY~F--d~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie--~It~~le~elq---~~fLiy---Rn- 97 (402)
..|-||.| |..+++|.-.|+ |.|.|......-+++|+ |=|.+.-.++. .|.+++.++.. +..++| .+
T Consensus 51 ~RaKLf~f~~d~~~~~WKERGv-G~lkIlk~k~t~k~Rlv-MR~d~~~kV~LN~~I~~~m~~~~~~~s~ks~v~~~~~d~ 128 (201)
T 1k5d_B 51 MRAKLFRFASENDLPEWKERGT-GDVKLLKHKEKGAIRLL-MRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADF 128 (201)
T ss_dssp EEEEEEEECCTTSSCCEEEEEE-EEEEEEECSSSCCEEEE-EEETTTCCEEEEEECCSSCCCCBCSSCSSEEEEEEEEEC
T ss_pred EeeeEEEecccccCCCccccce-EEEEEEEcCCCCcEEEE-EEECCcceEEEeeEecCCceeeecCCCCceEEEEecccc
Confidence 46899999 778899998886 89999877555566654 44455556655 48888888754 334444 22
Q ss_pred C--C--CcEEEEEeeccchhHHHHHHHHHHHHHhhcCCC
Q psy3152 98 K--Q--GLIYGIWFYNKEDCHRISDILQSLVKELTHTPS 132 (402)
Q Consensus 98 ~--~--~~IyGIWFyd~ed~~rI~~ll~~lv~~~~~~~~ 132 (402)
. . -..|.|=|-+.+++..+...|.++.+.+.....
T Consensus 129 ad~~~k~e~~~iRfks~e~A~~f~~~~ee~k~~~~~~~~ 167 (201)
T 1k5d_B 129 ADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREK 167 (201)
T ss_dssp TTSSCEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHHHhhhc
Confidence 1 2 356999999999999999999999888776554
No 24
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.74 E-value=7.7 Score=32.98 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=64.7
Q ss_pred CcEEEEEeeCCCCCccccCceeeEEEEEeCCCCceEEEEecCCCCCCcee--eCcCcceeEEe--CCEEEEEc-----C-
Q psy3152 29 THVALYSFNGHKSEWDKTNIEGALFVYRRVESPLYSMFILNRNSPENLLE--PVVKELDLQLQ--NPFILYKN-----K- 98 (402)
Q Consensus 29 shVvVY~Fd~~tneWeKtdIEGtLFVy~Rs~~P~y~liILNR~s~eNfie--~It~~le~elq--~~fLiyRn-----~- 98 (402)
.-|-||.|+ +++|.-.|+ |+|.|-... .-+++|++=+..+....+. .|.+++.++.. +...++-. +
T Consensus 18 ~raKLf~~~--~~~WkERGv-G~lki~~~k-~~k~RllmR~d~~~~kv~lN~~i~~~m~~~~~g~~~~~~~~~~~~~~d~ 93 (125)
T 2ec1_A 18 KKCKLFYKK--DNEFKEKGI-GTLHLKPTA-NQKTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPIDE 93 (125)
T ss_dssp EEEEEEEEC--SSSEEEEEE-EEEEEEECS-SSSEEEEEEESSSSCCBSCCEECCSSCCEECCTTTEEEEEECCSSCSCS
T ss_pred EeeEEEEec--CCCcccccE-EEEEeeecC-CCcEEEEEEecCCCCEEEEeeEEcCCCeEEecCCCcEEEEEccCCcccC
Confidence 457899994 689998887 899996543 3466666555444455554 48889988876 34555542 1
Q ss_pred C----CcEEEEEeeccchhHHHHHHHHHH
Q psy3152 99 Q----GLIYGIWFYNKEDCHRISDILQSL 123 (402)
Q Consensus 99 ~----~~IyGIWFyd~ed~~rI~~ll~~l 123 (402)
. -+.|-|+|-+.++++.+.+.|.+.
T Consensus 94 ~~~~~~~~~~lrfk~~e~a~~f~~~~~e~ 122 (125)
T 2ec1_A 94 KNATMPVTMLIRVKTSEDADELHKILLEK 122 (125)
T ss_dssp SSSSSCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEEECCHHHHHHHHHHHHHh
Confidence 1 458999999999999999888754
No 25
>1tqz_A Necap1; endocytosis, structural genomics, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: b.55.1.11
Probab=27.01 E-value=1.9e+02 Score=25.25 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=71.3
Q ss_pred CcchHHHHhhCCcEEEEEeeCCC-------CCccc--cCceeeEEEEEeCCCCceEEEEecCCCCCCce-e-eC--cCcc
Q psy3152 18 DPMVKDLVDSATHVALYSFNGHK-------SEWDK--TNIEGALFVYRRVESPLYSMFILNRNSPENLL-E-PV--VKEL 84 (402)
Q Consensus 18 DP~I~sIL~~AshVvVY~Fd~~t-------neWeK--tdIEGtLFVy~Rs~~P~y~liILNR~s~eNfi-e-~I--t~~l 84 (402)
+..|++||.+...|.||+-=+.+ .+|.- .--.|.|=|+++.. -+.|.|--.++..+. . |+ ++..
T Consensus 4 ~~~~E~vL~v~~ev~VY~IPP~~s~~GyrA~dW~~~~~~wtGrlrv~~~g~---~~~I~LeD~~tGeLFA~cPv~~~~~~ 80 (133)
T 1tqz_A 4 ELEYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGK---IAYIKLEDKVSGELFAQAPVEQYPGI 80 (133)
T ss_dssp SCCCSCCCBCCSSEEEEECCSCCSSSSCCHHHHCCSSSCEEEEEEEECCSS---SEEEEEECSSCCSSCEEEEECSSCCC
T ss_pred ccceeEEEEEcCcEEEEecCCCCCCCCcccccCCCCCceeEEEEEEEEeCC---EEEEEEEeCCCCcEEEeCcccCCCCc
Confidence 45689999999999999986643 35743 34689999998764 356666666665432 1 33 3333
Q ss_pred eeEEe---CCEEEEEc----CCCcEEEEEeeccchhHHHHHHHHHHHHH
Q psy3152 85 DLQLQ---NPFILYKN----KQGLIYGIWFYNKEDCHRISDILQSLVKE 126 (402)
Q Consensus 85 e~elq---~~fLiyRn----~~~~IyGIWFyd~ed~~rI~~ll~~lv~~ 126 (402)
-+|-- -.|..+|- ++....||.|-+..|.=.+...|+...+.
T Consensus 81 ~VE~v~DSSRYFVlRv~d~~gr~AfiGiGF~eR~dAFDF~vaLqd~~k~ 129 (133)
T 1tqz_A 81 AVETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKW 129 (133)
T ss_dssp CEEECTTCCSCEEEEEEETTTEEEEEEEECSCHHHHHHHHHHHHHHHSC
T ss_pred ceEEeecCcCeEEEEEECCCCcEEEEeeeecccccccchHHHHHHHHHH
Confidence 34422 23777764 34689999999999887777777655443
No 26
>1m3w_A H10H24; four-helix bundle, heme binding, maquette, heme binding protein, electron transport, de novo protein; 2.80A {Synthetic} SCOP: k.8.1.1
Probab=20.02 E-value=51 Score=22.02 Aligned_cols=15 Identities=40% Similarity=0.838 Sum_probs=10.0
Q ss_pred HHHHHHHHhhhhhhh
Q psy3152 386 NKLHEAYLNSFKDVV 400 (402)
Q Consensus 386 ~~~heay~~~~~~~~ 400 (402)
=|+||.||+.|.+.+
T Consensus 7 wklheeflkkfeell 21 (32)
T 1m3w_A 7 WKLHEEFLKKFEELL 21 (32)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 367777777776643
Done!