BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3153
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94514|COX5A_DROME Cytochrome c oxidase subunit 5A, mitochondrial OS=Drosophila
melanogaster GN=CoVa PE=1 SV=2
Length = 149
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 61/84 (72%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MNDL D VP P II A L+A+RR+ND AL IR LE ++KCG +K ++PY+L +I P
Sbjct: 62 MNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGCKDKCGDQKATLYPYLLEKITP 121
Query: 61 TLTELGIETPEDLGYDKPELWCKS 84
TL ELGI T E+LGYDKPEL KS
Sbjct: 122 TLQELGIPTIEELGYDKPELALKS 145
>sp|B0VYX8|COX5A_PAPAN Cytochrome c oxidase subunit 5A, mitochondrial OS=Papio anubis
GN=COX5A PE=2 SV=1
Length = 150
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N LA D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLATYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|P20674|COX5A_HUMAN Cytochrome c oxidase subunit 5A, mitochondrial OS=Homo sapiens
GN=COX5A PE=1 SV=2
Length = 150
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEVVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYX2|COX5A_PANPA Cytochrome c oxidase subunit 5A, mitochondrial OS=Pan paniscus
GN=COX5A PE=2 SV=1
Length = 150
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYX1|COX5A_PANTR Cytochrome c oxidase subunit 5A, mitochondrial OS=Pan troglodytes
GN=COX5A PE=2 SV=1
Length = 150
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYY5|COX5A_MACPM Cytochrome c oxidase subunit 5A, mitochondrial OS=Macropus parma
GN=COX5A PE=2 SV=1
Length = 154
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRL+D+A +R+LE+V++K G K+ I+PYI+ E+RP
Sbjct: 78 MNTLVGYDLVPEPKIIDAALRACRRLDDFASAVRILEVVKDKAGPHKE-IYPYIIQELRP 136
Query: 61 TLTELGIETPEDLGYDKP 78
TL ELGI TPE+LG DKP
Sbjct: 137 TLDELGISTPEELGLDKP 154
>sp|B0VYX4|COX5A_PONPY Cytochrome c oxidase subunit 5A, mitochondrial OS=Pongo pygmaeus
GN=COX5A PE=2 SV=1
Length = 150
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYX6|COX5A_HYLSY Cytochrome c oxidase subunit 5A, mitochondrial OS=Hylobates
syndactylus GN=COX5A PE=2 SV=1
Length = 150
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYY3|COX5A_OTOCR Cytochrome c oxidase subunit 5A, mitochondrial OS=Otolemur
crassicaudatus GN=COX5A PE=2 SV=1
Length = 150
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRLND+A +R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 74 MNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYX9|COX5A_CALPY Cytochrome c oxidase subunit 5A, mitochondrial OS=Callithrix
pygmaea GN=COX5A PE=2 SV=1
Length = 150
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYX5|COX5A_NOMGA Cytochrome c oxidase subunit 5A, mitochondrial OS=Nomascus
gabriellae GN=COX5A PE=2 SV=1
Length = 150
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|P00426|COX5A_BOVIN Cytochrome c oxidase subunit 5A, mitochondrial OS=Bos taurus
GN=COX5A PE=1 SV=2
Length = 152
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRLND+A +R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 76 MNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKE-IYPYVIQELRP 134
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 135 TLNELGISTPEELGLDK 151
>sp|B0VYY0|COX5A_SAGLB Cytochrome c oxidase subunit 5A, mitochondrial OS=Saguinus labiatus
GN=COX5A PE=2 SV=1
Length = 150
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|P11240|COX5A_RAT Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus
GN=Cox5a PE=1 SV=1
Length = 146
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRLND+A +R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 70 MNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKE-IYPYVIQELRP 128
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 129 TLNELGISTPEELGLDK 145
>sp|B0VYY2|COX5A_NYCCO Cytochrome c oxidase subunit 5A, mitochondrial OS=Nycticebus
coucang GN=COX5A PE=2 SV=1
Length = 150
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRLND+A +R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 74 MNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|Q53CG1|COX5A_SAISC Cytochrome c oxidase subunit 5A, mitochondrial OS=Saimiri sciureus
GN=COX5A PE=2 SV=1
Length = 150
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYY4|COX5A_EULFU Cytochrome c oxidase subunit 5A, mitochondrial OS=Eulemur fulvus
fulvus GN=COX5A PE=2 SV=1
Length = 152
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRLND+A +R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 76 MNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKE-IYPYVIQELRP 134
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 135 TLNELGISTPEELGLDK 151
>sp|B0VYX7|COX5A_COLGU Cytochrome c oxidase subunit 5A, mitochondrial OS=Colobus guereza
GN=COX5A PE=2 SV=1
Length = 150
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|P12787|COX5A_MOUSE Cytochrome c oxidase subunit 5A, mitochondrial OS=Mus musculus
GN=Cox5a PE=1 SV=2
Length = 146
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
MN L D VP+P II AAL+A RRLND+A +R+LE+V++K G K+ I+PY++ E+RP
Sbjct: 70 MNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKE-IYPYVIQELRP 128
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 129 TLNELGISTPEELGLDK 145
>sp|Q53CF8|COX5A_MACMU Cytochrome c oxidase subunit 5A, mitochondrial OS=Macaca mulatta
GN=COX5A PE=2 SV=1
Length = 150
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYY1|COX5A_CALDO Cytochrome c oxidase subunit 5A, mitochondrial OS=Callicebus
donacophilus GN=COX5A PE=2 SV=1
Length = 150
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLND+A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDLVPEPKIIDAALRACRRLNDFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|B0VYX3|COX5A_GORGO Cytochrome c oxidase subunit 5A, mitochondrial OS=Gorilla gorilla
gorilla GN=COX5A PE=2 SV=1
Length = 150
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N L D VP+P II AAL+A RRLN++A T+R+LE V++K G K+ I+PY++ E+RP
Sbjct: 74 INTLVTYDMVPEPKIIDAALRACRRLNEFASTVRILEAVKDKAGPHKE-IYPYVIQELRP 132
Query: 61 TLTELGIETPEDLGYDK 77
TL ELGI TPE+LG DK
Sbjct: 133 TLNELGISTPEELGLDK 149
>sp|P55954|COX5A_CAEEL Cytochrome c oxidase subunit 5A, mitochondrial OS=Caenorhabditis
elegans GN=cco-2 PE=1 SV=2
Length = 174
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCG--KKKKVIWPYILGEI 58
+++L D +PDP ++ AAL+A RR+ND+AL +R LE ++ KCG K + ++ YI+ ++
Sbjct: 66 LSELHDYDVIPDPKVVEAALRACRRVNDFALAVRFLEAIKIKCGAQKNRDTVYAYIVKQV 125
Query: 59 RPTLTELGIETPEDLGYDKPELWC 82
P L ELGI+TPE LGY +PE +
Sbjct: 126 EPVLKELGIDTPEQLGYGEPEFFV 149
>sp|Q9UTF6|COX6_SCHPO Cytochrome c oxidase subunit 6, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cox6 PE=3 SV=1
Length = 140
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N+ D VP +I AL+AARR+ND+ +R+ E ++ K K++ + + E++P
Sbjct: 68 LNNCFAYDIVPSSDVIEQALRAARRVNDFPTAVRIFEGIKVKLPTKEQ--YQAYVKELKP 125
Query: 61 TLTELGIETPEDL 73
ELGI EDL
Sbjct: 126 VCNELGIVLKEDL 138
>sp|P00427|COX6_YEAST Cytochrome c oxidase subunit 6, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COX6 PE=1
SV=1
Length = 148
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N+ D VP P +I AL+AARR+ND IR+ E ++ K + + + L E++
Sbjct: 73 LNNCFSYDLVPAPAVIEKALRAARRVNDLPTAIRVFEALKYKVENEDQ--YKAYLDELKD 130
Query: 61 TLTELGIETPEDL 73
ELG+ E+L
Sbjct: 131 VRQELGVPLKEEL 143
>sp|Q01359|COX6_NEUCR Cytochrome c oxidase subunit 6, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=cox-6 PE=3 SV=2
Length = 148
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+N+ D VP P ++ AALKAARR+ND+ +R+ E ++ K K + + L E++P
Sbjct: 72 LNNAFAYDLVPSPSVLAAALKAARRVNDFPTAVRVFEGIKAKVENKGQ--YEQYLAELKP 129
Query: 61 TLTELGIETPEDL 73
ELGI EDL
Sbjct: 130 LREELGITLKEDL 142
>sp|Q39VY5|PYRF_GEOMG Orotidine 5'-phosphate decarboxylase OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=pyrF PE=3 SV=1
Length = 239
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 1 MNDLAQDDGVPDPVIIIAALKAARRLNDYALTIRLLEMVQEKCGKKKKVIWPYILGEIRP 60
+ DL + VPD V+ +A L ++ + R + +++E CG ++ P +RP
Sbjct: 133 LKDLGIEHTVPDMVVRLATLARKAGIDGVVASPREIPLIREACGSDFLIVTP----GVRP 188
Query: 61 TLTEL 65
+ L
Sbjct: 189 SFAAL 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,992,612
Number of Sequences: 539616
Number of extensions: 1253935
Number of successful extensions: 2475
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2424
Number of HSP's gapped (non-prelim): 29
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)