BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3155
(131 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 122 bits (306), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Query: 1 MRKAFQMFDTAK-TGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ AF+ F+T + +G + T +I IL +G + ++ LIDE DP G ++FD F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 60 IATHFL-EEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ 118
I FL EE + E MQ+EL+EAFRLYD+EGNGYI+T +REILA LD+ L+ EDLD +I
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMID 134
Query: 119 EIDTDGSGTVDFD 131
EID DGSGTVDF+
Sbjct: 135 EIDADGSGTVDFE 147
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF+++D G+I T + IL + + +L A+IDE D D +G V+F+ F +
Sbjct: 93 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 152
Query: 61 AT 62
T
Sbjct: 153 MT 154
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 374 ARWMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 431 IDGDGQVNYE 440
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 352 MINEVDADGNGTIDF 366
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 61 AT 62
T
Sbjct: 446 MT 447
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 99.4 bits (246), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 69
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EELKEAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 70 ARKMKDTDSE---EELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 126
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 127 VDGDGQVNYE 136
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EELKEAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 VDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 98.6 bits (244), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 98.6 bits (244), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 76
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 77 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 133
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 134 IDGDGQVNYE 143
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 69
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 89 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 148
Query: 61 AT 62
T
Sbjct: 149 MT 150
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 71 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 128 IDGDGQVNYE 137
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 61 AT 62
T
Sbjct: 143 MT 144
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 74
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 75 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 131
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 132 IDGDGQVNYE 141
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 67
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 87 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
Query: 61 AT 62
T
Sbjct: 147 MT 148
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 71 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 128 IDGDGQVNYE 137
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 61 AT 62
T
Sbjct: 143 MT 144
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 61 ATHFL 65
T L
Sbjct: 146 MTAKL 150
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 69
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 70 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 126
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 127 IDGDGQVNYE 136
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 82 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
Query: 61 AT 62
T
Sbjct: 142 MT 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 69 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 125
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 126 IDGDGQVNYE 135
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 81 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
Query: 61 AT 62
T
Sbjct: 141 MT 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 71
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 72 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 128
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 129 IDGDGQVNYE 138
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 84 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
Query: 61 AT 62
T
Sbjct: 144 MT 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 71 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 128 IDGDGQVNYE 137
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 61 AT 62
T
Sbjct: 143 MT 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 78
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 79 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 135
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 136 IDGDGQVNYE 145
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 91 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
Query: 61 AT 62
T
Sbjct: 151 MT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 375 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 431
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 432 IDGDGQVNYE 441
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 293 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 352
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 353 MINEVDADGNGTIDF 367
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 387 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 446
Query: 61 AT 62
T
Sbjct: 447 MT 448
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 374 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 431 IDGDGQVNYE 440
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 352 MINEVDADGNGTIDF 366
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 61 AT 62
T
Sbjct: 446 MT 447
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 374 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 431 IDGDGQVNYE 440
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 352 MINEVDADGNGTIDF 366
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 61 AT 62
T
Sbjct: 446 MT 447
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 337 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 393
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 394 IDGDGQVNYE 403
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 255 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 314
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 315 MINEVDADGNGTIDF 329
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 349 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
Query: 61 AT 62
T
Sbjct: 409 MT 410
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 340 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 396
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 397 IDGDGQVNYE 406
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 258 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 317
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 318 MINEVDADGNGTIDF 332
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Query: 61 AT 62
T
Sbjct: 412 MT 413
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 340 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 396
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 397 IDGDGQVNYE 406
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 258 ILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 317
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 318 MINEVDADGNGTIDF 332
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Query: 61 AT 62
T
Sbjct: 412 MT 413
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E E+LKEAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 VDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EELKEAFR++D++ NG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G +++D
Sbjct: 131 VDGDGQINYD 140
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD + GFI ++ ++ +G+ D E+ +I E D D G++N+D F ++
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 374 ARKMKYTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 431 IDGDGQVNYE 440
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG+GT+DF
Sbjct: 352 MINEVDADGNGTIDF 366
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 61 AT 62
T
Sbjct: 446 MT 447
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 373 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 430 IDGDGQVNYE 439
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 291 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 350
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG GT+DF
Sbjct: 351 MINEVDADGDGTIDF 365
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 61 AT 62
T
Sbjct: 445 MT 446
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E +
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E + D G+VN++ F ++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 96.7 bits (239), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMM 364
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 365 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 421
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 422 IDGDGQVNYE 431
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG GT+DF
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 377 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436
Query: 61 AT 62
T
Sbjct: 437 MT 438
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 373
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 374 ARKMKYTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 431 IDGDGQVNYE 440
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 351
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG GT+DF
Sbjct: 352 MINEVDADGDGTIDF 366
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 61 AT 62
T
Sbjct: 446 MT 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 373 ARKMKYTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 430 IDGDGQVNYE 439
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 291 ILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 350
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG GT+DF
Sbjct: 351 MINEVDADGDGTIDF 365
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 61 AT 62
T
Sbjct: 445 MT 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ D+E EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D
Sbjct: 373 ARKMKYTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 430 IDGDGQVNYE 439
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 291 ILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD 350
Query: 116 IIQEIDTDGSGTVDF 130
+I E+D DG GT+DF
Sbjct: 351 MINEVDADGDGTIDF 365
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 61 AT 62
T
Sbjct: 445 MT 446
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F +
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GFI ++ ++ +G+ D E+ +I E+D D G+VN++ F +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 96.3 bits (238), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F +
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L + L E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 131 IDGDGQVNYE 140
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 61 AT 62
T
Sbjct: 146 MT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 95.9 bits (237), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++D++GNGYI+ A LR ++ L + L E++D +I+E D
Sbjct: 73 ARKMKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 IDGDGQVNYE 139
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 61 AT 62
T
Sbjct: 145 MT 146
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 95.5 bits (236), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EELKEAFR++D++ NG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 74 ARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 122 TDGSGTVDFD 131
DG G ++++
Sbjct: 131 VDGDGQINYE 140
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD + GFI ++ ++ +G+ D E+ +I E D D G++N++ F ++
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 84/130 (64%), Gaps = 4/130 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E E++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E +
Sbjct: 69 ARKMKDTDSE----EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 125 IDGDGQVNYE 134
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E + D G+VN++ F ++
Sbjct: 80 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 139
Query: 61 AT 62
T
Sbjct: 140 MT 141
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF FD TG I T ++ T++ T+GQ + ELQ LI E + + G++NF FC I
Sbjct: 13 KDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+ E D E EE++EAF+++DR+G+G+I+ A LR ++ L +K+ E++D +I+E D
Sbjct: 73 AKQMRETDTE---EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G ++++
Sbjct: 130 FDGDGMINYE 139
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
MR+AF++FD GFI ++ ++ +G+ D E+ +I E D D G +N++ F +
Sbjct: 85 MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWM 144
Query: 61 ATH 63
+
Sbjct: 145 ISQ 147
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E K+AF +D+EG G I T L ++ L +L +I E + + +G ++F
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++E D+E EEL EAF+++DR+GNG I+ A LR ++ L +KL +++D +I+E D
Sbjct: 73 ARKMKEQDSE---EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G ++++
Sbjct: 130 IDGDGHINYE 139
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+AF++FD G I ++ ++ +G+ D E+ +I E D D G +N++ F R+
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 83/130 (63%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++E D+E EEL EAF+++DR+GNG I+ A LR ++ L +KL +++D +I+E D
Sbjct: 73 ARKMKEQDSE---EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 129
Query: 122 TDGSGTVDFD 131
DG G ++++
Sbjct: 130 IDGDGHINYE 139
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+AF++FD G I ++ ++ +G+ D E+ +I E D D G +N++ F R+
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ +EE++EAFR++D++GNG+I+ A LR ++ L +KL E++D +I+E D
Sbjct: 73 ARKMKDS-----EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 128 IDGDGQVNYE 137
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GFI ++ ++ +G+ D E+ +I E D D G+VN++ F +
Sbjct: 83 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
Query: 61 AT 62
T
Sbjct: 143 MT 144
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 92.0 bits (227), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D G ++F F +
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMM 373
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D+E EE++EAFR++ ++GNGYI+ A LR ++ L +KL E++D +I+E
Sbjct: 374 ARKMKDTDSE---EEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAG 430
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 431 IDGDGQVNYE 440
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 60 IATHFLEEDDAEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDG 115
I H LE + + + EE KEAF L+D++G+G ITT L ++ +L +L
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQD 351
Query: 116 IIQEIDTDGSGTVDF 130
+I E+ DG+GT+DF
Sbjct: 352 MINEVGADGNGTIDF 366
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++F G+I ++ ++ +G+ D E+ +I E D G+VN++ F ++
Sbjct: 386 IREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQM 445
Query: 61 AT 62
T
Sbjct: 446 MT 447
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + EL+ ++ E D D G V+F F +
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ D E EE++EAFR++D++GNG+++ A LR ++ L +KL+ E++D +I+ D
Sbjct: 73 ARKMKDTDNE---EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAAD 129
Query: 122 TDGSGTVDFD 131
TDG G V+++
Sbjct: 130 TDGDGQVNYE 139
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L ++ EID DG+GTVDF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 65
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD GF+ ++ ++ +G+ D E+ +I D D G+VN++ F R+
Sbjct: 85 IREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRV 144
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T+ ++GQ + ELQ I+E D D G ++F F
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTX 72
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
++ D+E EE++EAFR++D++GNGYI+ A LR + L +KL E++D I+E
Sbjct: 73 XARKXKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREA 129
Query: 121 DTDGSGTVDFD 131
D DG G V+++
Sbjct: 130 DIDGDGQVNYE 140
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L + +L +L I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ + +G+ D E+ I E D D G+VN++ F +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQX 145
Query: 61 AT 62
T
Sbjct: 146 XT 147
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T+ ++GQ + ELQ I+E D D G ++F F
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTX 71
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
++ D+E EE++EAFR++D++GNGYI+ A LR + L +KL E++D I+E
Sbjct: 72 XARKXKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
Query: 121 DTDGSGTVDFD 131
D DG G V+++
Sbjct: 129 DIDGDGQVNYE 139
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L + +L +L I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ + +G+ D E+ I E D D G+VN++ F +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQX 144
Query: 61 AT 62
T
Sbjct: 145 XT 146
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 89.4 bits (220), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T+ ++G + ELQ I+E D D G +NF F
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTX 71
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
++ D+E EE++EAFR++D++GNGYI+ A LR + L +KL E++D I+E
Sbjct: 72 XARCXKDTDSE---EEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
Query: 121 DTDGSGTVDFD 131
D DG G V+++
Sbjct: 129 DIDGDGQVNYE 139
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L + +L +L I E+D DG+GT++F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ + +G+ D E+ I E D D G+VN++ F +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQX 144
Query: 61 AT 62
T
Sbjct: 145 XT 146
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 89.4 bits (220), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I +++T++ ++ Q + ELQ +I E D D G + FD F +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+++ DAE EELKEAF+++D++ NGYI+ + LR ++ L +KL E+++ +I+E D
Sbjct: 73 AKKVKDTDAE---EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD 129
Query: 122 TDGSGTVDFD 131
DG G V+++
Sbjct: 130 LDGDGQVNYE 139
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 77 LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
KEAF L+D++G+G IT L ++ +LD E+L +I E+D DG+GT++FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD + G+I ++ ++ +G+ D E++ +I E D D G+VN++ F ++
Sbjct: 85 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 89.4 bits (220), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 51/59 (86%)
Query: 73 MQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
MQ+EL+EAFRLYD+EGNGYI+T +REILA LD+ L+ EDLD +I EID DGSGTVDF+
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 59
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF+++D G+I T + IL + + +L A+IDE D D +G V+F+ F +
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 61 AT 62
T
Sbjct: 65 MT 66
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL E FR++DR +GYI L EI A + + E+++ ++++ D
Sbjct: 80 VRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGD 139
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 140 KNNDGRIDFD 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+ L ++ L E+LD II+E+D DGSGT+D
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 130 FD 131
F+
Sbjct: 72 FE 73
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 36/60 (60%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ + F++FD G+ID +++ I G+ D E+++L+ + D + G+++FD F ++
Sbjct: 95 LAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 76/130 (58%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL++ FR++D+ +G+I L EIL A + + ED++ ++++ D
Sbjct: 83 VRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 143 KNNDGRIDFD 152
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD GFID ++ IL G+ + +++ L+ ++D + G+++FD F ++
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL E FR++DR +GYI L EI A + + E+++ ++++ D
Sbjct: 80 VRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGD 139
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 140 KNNDGRIDFD 149
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+ L ++ L E+LD II+E+D DGSGT+D
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 130 FD 131
F+
Sbjct: 72 FE 73
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 34/56 (60%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD G+ID +++ I G+ D E+++L+ + D + G+++FD F ++
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 75/130 (57%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL + FR++D+ +G+I L EIL A + + ED++ ++++ D
Sbjct: 83 VRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 143 KNNDGRIDFD 152
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD GFID ++ IL G+ + +++ L+ ++D + G+++FD F ++
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL FR++D+ +G+I L EIL A + + ED++ ++++ D
Sbjct: 83 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 142
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 143 KNNDGRIDFD 152
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD GFID ++ IL G+ + +++ L+ ++D + G+++FD F ++
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 20 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL FR++D+ +G+I L EIL A + + ED++ ++++ D
Sbjct: 80 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSD 139
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 140 KNNDGRIDFD 149
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 71
Query: 130 FD 131
F+
Sbjct: 72 FE 73
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD GFID ++ IL G+ + +++ L+ ++D + G+++FD F ++
Sbjct: 98 CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 154
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
++ED +EEL FR++D+ +G+I L EIL A + + ED++ ++++ D
Sbjct: 83 VRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSD 142
Query: 122 TDGSGTVDFD 131
+ G +DFD
Sbjct: 143 KNNDGRIDFD 152
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD GFID ++ IL G+ + +++ L+ ++D + G+++FD F ++
Sbjct: 101 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I + +++T++ ++G + E+ L++E D D ++ F F +
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+ L+ +D+E +EL EAF+++D+ G+G I+ A L+ +L ++ +KL ++D +++E+
Sbjct: 73 SRQLKSNDSE---QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV- 128
Query: 122 TDGSGTVDF 130
+DGSG ++
Sbjct: 129 SDGSGEINI 137
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++ NG I+++ L ++ +L + +++ ++ EID DG+ ++F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I + +++T++ ++G + E+ L++E D D ++ F F +
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+ L+ +D+E +EL EAF+++D+ G+G I+ A L+ +L ++ +KL ++D +++E+
Sbjct: 74 SRQLKSNDSE---QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV- 129
Query: 122 TDGSGTVDF 130
+DGSG ++
Sbjct: 130 SDGSGEINI 138
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++ NG I+++ L ++ +L + +++ ++ EID DG+ ++F
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD +G I +++T++ ++G + E+ L++E D D + F F +
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALM 73
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+ L+ +D+E +EL EAF+++D+ G+G I+ A L+ +L ++ +KL ++D +++E+
Sbjct: 74 SRQLKCNDSE---QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV- 129
Query: 122 TDGSGTVDF 130
+DGSG ++
Sbjct: 130 SDGSGEINI 138
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++ +G I+ + L ++ +L + ++ ++ EID DG+ ++F
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF+ FD K G+I+ + + TMG + + EL L + + + G V+FD F +
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
Query: 61 ATHFLEEDDAEAMQ-EELKEAFRLYDREGNGYITTATLREILAA-LDDKLNPEDLDGIIQ 118
L + A+ + +EL++AFR +D G+G I+T+ LRE + A L ++ D++ II+
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIR 132
Query: 119 EIDTDGSGTVDFD 131
++D +G G VDF+
Sbjct: 133 DVDLNGDGRVDFE 145
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
EEL+EAFR +D++ +GYI L + + +L + Q+I+ + G VDFD
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF +FD TG ID ++ + +G E++ +I E D + TGK+NF F +
Sbjct: 8 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 67
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
T + E D +EE+ +AF+L+D + G I+ L+ + L + L E+L +I E
Sbjct: 68 MTQKMSEKDT---KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 124
Query: 121 DTDGSGTV 128
D DG G V
Sbjct: 125 DRDGDGEV 132
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +TG I + + +G+ D ELQ +IDE D D G+V+ F RI
Sbjct: 83 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 140
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E++EAF L+D +G G I L+ + AL + E++ +I EID +G+G ++F
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF+ FD K G+I+ + + TMG + + EL L + + + G V+FD F +
Sbjct: 27 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 86
Query: 61 ATHFLEEDDAEAMQ-EELKEAFRLYDREGNGYITTATLREILAA-LDDKLNPEDLDGIIQ 118
L + A+ + +EL++AFR +D G+G I+T+ LRE + L ++ D++ II+
Sbjct: 87 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 146
Query: 119 EIDTDGSGTVDFD 131
++D +G G VDF+
Sbjct: 147 DVDLNGDGRVDFE 159
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
EEL+EAFR +D++ +GYI L + + +L + Q+I+ + G VDFD
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 81
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF+ FD K G+I+ + + TMG + + EL L + + + G V+FD F +
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
Query: 61 ATHFLEEDDAEAMQ-EELKEAFRLYDREGNGYITTATLREILAA-LDDKLNPEDLDGIIQ 118
L + A+ + +EL++AFR +D G+G I+T+ LRE + L ++ D++ II+
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 132
Query: 119 EIDTDGSGTVDFD 131
++D +G G VDF+
Sbjct: 133 DVDLNGDGRVDFE 145
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
EEL+EAFR +D++ +GYI L + + +L + Q+I+ + G VDFD
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+M+D G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 101 FRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 70.9 bits (172), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF++FD+ +TGFI + T+L G + + +E D GK+ F F +
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSM 67
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++ +E + L++AFR +D EG GYI A L++ L L D+L P + +
Sbjct: 68 MGRRMKQTTSEDI---LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGIT 124
Query: 121 DTDGSGTVDFD 131
+T+ G + +D
Sbjct: 125 ETE-KGQIRYD 134
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D E G+IT L+ +L ++ P + + E D G+G + F
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
+R+AF+ FD TG+I + L +G E + + + G++ +D F
Sbjct: 81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETEK-GQIRYDNFI 137
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+++D +EEL + FR+ D+ +GYI L+ +L A + + +D++ ++++
Sbjct: 81 MVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDG 140
Query: 121 DTDGSGTVDFD 131
D + G +D+D
Sbjct: 141 DKNNDGRIDYD 151
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+M D G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 101 FRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF +FDT +G ID ++ + +G E++ +I + D D +G ++F+ F ++
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQM 69
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
T + E D+ +EE+ +AFRL+D + G I+ L+ + L + + E+L +I E
Sbjct: 70 MTAKMGERDS---REEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEA 126
Query: 121 DTDGSGTVD 129
D DG G V+
Sbjct: 127 DRDGDGEVN 135
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E++EAF L+D +G+G I L+ + AL + E++ +I +ID DGSGT+DF
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 131 D 131
+
Sbjct: 64 E 64
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +TG I + + +G+ D ELQ +IDE D D G+VN + F RI
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRI 142
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF +FDT +G ID ++ + +G E++ +I E D D +G ++F+ F +
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 89
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
T + E D+ +EE+ +AFRL+D + +G IT LR + L + L E+L +I E
Sbjct: 90 MTAKMGERDS---REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEA 146
Query: 121 DTDGSGTVDFD 131
D + +D D
Sbjct: 147 DRNDDNEIDED 157
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E++EAF L+D +G+G I L+ + AL + E++ +I EID DGSGT+DF
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 131 D 131
+
Sbjct: 84 E 84
Score = 33.1 bits (74), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +G I + + +G+ + ELQ +I E D + +++ D F RI
Sbjct: 105 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 162
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I + +++T++ ++G + E+ L++E D D ++ F F +
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLD 114
+ L+ +D+E +EL EAF+++D+ G+G I+ A L+ +L ++ +KL +L+
Sbjct: 73 SRQLKSNDSE---QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++ NG I+++ L ++ +L + +++ ++ EID DG+ ++F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
Query: 61 AT 62
T
Sbjct: 71 MT 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
Query: 61 AT 62
T
Sbjct: 70 MT 71
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 58
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 61 AT 62
T
Sbjct: 64 MT 65
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
Query: 61 AT 62
T
Sbjct: 67 MT 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
Query: 61 AT 62
T
Sbjct: 68 MT 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR++D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++FD G+I + ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
Query: 61 AT 62
T
Sbjct: 69 MT 70
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 44/58 (75%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE++EAFR+ D++GNGYI+ A LR ++ L +KL E++D +I+E D DG G V+++
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF++ D G+I ++ ++ +G+ D E+ +I E D D G+VN++ F ++
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
Query: 61 AT 62
T
Sbjct: 91 MT 92
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EELKEAFR++D++ NG+I+ A LR ++ L +KL E++D +I+E D DG G ++++
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD + GFI ++ ++ +G+ D E+ +I E D D G++N++ F ++
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+ ELKEAFR+ D+E G I LR IL +L D+L ++++ +I E DTDGSGTVD++
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYE 63
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF M D + GFID + +L +MG+ D L+ ++ E A G +NF F
Sbjct: 10 KEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFL--- 62
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
T F E+ + ++ ++ AF +D E +G+I LRE+L + D+ E++D + +E
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAP 122
Query: 122 TDGSGTVDF 130
D G ++
Sbjct: 123 IDKKGNFNY 131
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R AF FD +GFI + +L TMG F D E+ + E D G N+ F RI
Sbjct: 78 IRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRI 137
Query: 61 ATH 63
H
Sbjct: 138 LKH 140
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
+E KEAF + D+ +G+I L ++LA++ E L+G++ E G ++F
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINF 58
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 44/58 (75%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EELKEAF+++D++ NGYI+ + LR ++ L +KL E+++ +I+E D DG G V+++
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD + G+I ++ ++ +G+ D E++ +I E D D G+VN++ F ++
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIAT 62
+AF +FD GF+D ++ + +G E+ LIDE D + + +D F +
Sbjct: 27 EAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMG 86
Query: 63 HFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDT 122
+ + D +E+K AF+L+D + G I+ LR + L + L E+L +I+E D
Sbjct: 87 EKILKRDP---LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDL 143
Query: 123 DGSGTVD 129
DG G ++
Sbjct: 144 DGDGEIN 150
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AFQ+FD TG I + + +G+ D EL+A+I+E D D G++N + F I
Sbjct: 98 IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
Query: 61 AT 62
T
Sbjct: 158 CT 159
Score = 32.7 bits (73), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E+ EAF L+D +G++ L+ + AL +L ++ +I E D++G + +
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 131 D 131
D
Sbjct: 79 D 79
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 44/58 (75%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EELKEAF+++D++ NGYI+ + LR ++ L +KL E+++ +I+E D DG G V+++
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF++FD + G+I ++ ++ +G+ D E++ +I E D D G+VN++ F ++
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 35 TELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITT 94
ELQ +I+E D D G ++F F + +++ D+E EE++EAFR++D++GNGYI+
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRVFDKDGNGYISA 57
Query: 95 ATLREILAAL 104
A LR ++ L
Sbjct: 58 AELRHVMTNL 67
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 112 DLDGIIQEIDTDGSGTVDF 130
+L +I E+D DG+GT+DF
Sbjct: 2 ELQDMINEVDADGNGTIDF 20
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF +FD TG ID ++ +G E++ I E D + TGK NF F +
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTV 92
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
T E D +EE+ +AF+L+D + G I+ L+ + L + L E+L I E
Sbjct: 93 XTQKXSEKDT---KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEA 149
Query: 121 DTDGSGTV 128
D DG G V
Sbjct: 150 DRDGDGEV 157
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +TG I + + +G+ D ELQ IDE D D G+V+ F RI
Sbjct: 108 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRI 165
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E++EAF L+D +G G I L+ AL + E++ I EID +G+G +F
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNF 86
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 65 LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDG 124
++E D+E EEL EAF+++DR+GNG I+ A LR ++ L +KL +++D +I+E D DG
Sbjct: 1 MKEQDSE---EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDG 57
Query: 125 SGTVDFD 131
G ++++
Sbjct: 58 DGHINYE 64
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+AF++FD G I ++ ++ +G+ D E+ +I E D D G +N++ F R+
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ +AF +FD GF+D ++ +G E+ LIDE D + +D F +
Sbjct: 25 IYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIV 84
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ + D +E+K AF+L+D + G I+ LR + L + L E+L I+E
Sbjct: 85 XGEKILKRDP---LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEF 141
Query: 121 DTDGSGTVD 129
D DG G ++
Sbjct: 142 DLDGDGEIN 150
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AFQ+FD TG I + + +G+ D EL+A I+E D D G++N + F I
Sbjct: 98 IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
Query: 61 AT 62
T
Sbjct: 158 CT 159
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E+ EAF L+D +G++ L+ AL +L ++ +I E D++G +
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 131 D 131
D
Sbjct: 79 D 79
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++ F+M DT +G I ++ L +G ++E++ L+D D D +G +++ F
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDD-KLNPEDLDGIIQE 119
H + +E L AF +D++G+GYI TL EI A D L+ +D +I+E
Sbjct: 72 TVHL----NKLEREENLVSAFSYFDKDGSGYI---TLDEIQQACKDFGLDDIHIDDMIKE 124
Query: 120 IDTDGSGTVDF 130
ID D G +D+
Sbjct: 125 IDQDNDGQIDY 135
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 70 AEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGS 125
AE + EE LKE F++ D + +G IT L++ L + +L ++ ++ D D S
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 126 GTVDF 130
GT+D+
Sbjct: 61 GTIDY 65
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 24/98 (24%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATH 63
AF FD +G+I +I G DD + +I E D D G++++ F
Sbjct: 87 AFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEF------ 138
Query: 64 FLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREIL 101
A + R+GNG I T+R+ L
Sbjct: 139 ----------------AAMMRKRKGNGGIGRRTMRKTL 160
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AFQ+ D K GFI I +++G+L + EL +++ E A G +NF F I
Sbjct: 60 KEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE----APGPINFTMFLTIF 115
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
+ D E + + AF L+D EG+G TL+ L +K + +++D + E
Sbjct: 116 GDRIAGTDEEDV---IVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAP 171
Query: 122 TDGSGTVD 129
DG+G +D
Sbjct: 172 IDGNGLID 179
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
+E KEAF+L D++ +G+I+ +R +L ++LD ++ E G ++F
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE----APGPINF 108
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T + T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEED 68
++ED
Sbjct: 83 VRQMKED 89
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 4 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 63
Query: 130 FD 131
F+
Sbjct: 64 FE 65
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 12 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
Query: 62 TH 63
Sbjct: 72 VR 73
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L E+LD II+E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I+E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEED 68
++ED
Sbjct: 83 VRQMKED 89
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GF+ I I +G+ DD EL A++ E A G +NF F I
Sbjct: 9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSI 64
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + + ++++L + D N +++ +E
Sbjct: 65 FSDKLSGTDSE---ETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 121
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 122 PVEG-GKFDY 130
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GF+ I I +G+ DD EL A++ E A G +NF F I
Sbjct: 8 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSI 63
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + + ++++L + D N +++ +E
Sbjct: 64 FSDKLSGTDSE---ETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 120
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 121 PVEG-GKFDY 129
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GFID + +++G+ DD EL A++ E A G +NF F I
Sbjct: 4 MKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNFTMFLSI 59
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + + ++++L + D N +++ +E
Sbjct: 60 FSDKLSGTDSE---ETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 116
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 117 PVEG-GKFDY 125
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+E+KEAF + D+ +G+I L+E ++L + ++L +++E
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE 46
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF M D + GFI + + +++G++ D EL A++ E G++NF F
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKE----CPGQLNFTAFL-- 71
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
T F E+ ++ L+ AF ++D +G G+I L+++L + D + E++ + ++
Sbjct: 72 -TLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPED-LDGIIQEI 120
++ +ELKEAF + D++ +G+I L+++ ++L ++ P+D L+ +++E
Sbjct: 11 SQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSL-GRVPPDDELNAMLKEC 61
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GF+ I I +G+ DD EL A++ E A G +NF F I
Sbjct: 9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSI 64
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + + ++++L + D N +++ +E
Sbjct: 65 FSDKLSGTDSE---ETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 121
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 122 PVEG-GKFDY 130
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GF+ I I +G+ DD EL A++ E A G +NF F I
Sbjct: 20 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSI 75
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + + ++++L + D N +++ +E
Sbjct: 76 FSDKLSGTDSE---ETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 132
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 133 PVEG-GKFDY 141
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GF+ I I +G+ DD EL A++ E A G +NF F I
Sbjct: 6 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSI 61
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + + ++++L + D N +++ +E
Sbjct: 62 FSDKLSGTDSE---ETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 118
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 119 PVEG-GKFDY 127
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GFID + + +++G+ DD EL A++ E A G +NF F I
Sbjct: 21 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLSI 76
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + ++++L + D N +++ +E
Sbjct: 77 FSDKLSGTDSE---ETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 133
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 134 PVEG-GKFDY 142
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 29/45 (64%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+E+KEAF + D+ +G+I L+E+ ++L + ++L +++E
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE 63
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GFID + + +++G+ DD EL A++ E A G +NF F I
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLSI 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + ++++L + D N +++ +E
Sbjct: 81 FSDKLSGTDSE---ETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 137
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 138 PVEG-GKFDY 146
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 31/50 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + +E+KEAF + D+ +G+I L+E+ ++L + ++L +++E
Sbjct: 18 PQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE 67
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M++AF M D + GFID + + +++G+ DD EL A++ E A G +NF F I
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNFTMFLSI 80
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
+ L D+E E ++ AF ++D + ++++L + D N +++ +E
Sbjct: 81 FSDKLSGTDSE---ETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 137
Query: 121 DTDGSGTVDF 130
+G G D+
Sbjct: 138 PVEG-GKFDY 146
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 31/50 (62%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + +E+KEAF + D+ +G+I L+E+ ++L + ++L +++E
Sbjct: 18 PQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE 67
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPD--ATGKVNFDGFCR 59
++AF++FD G I + ++ +GQ + E+ ++ D + +V+F+ F
Sbjct: 13 KEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLP 72
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + ++ + E+ E FR++D+EGNG + A LR +L L +K+ E+++ ++
Sbjct: 73 M-LQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG 131
Query: 120 IDTDGSGTVDFD 131
+ D +G ++++
Sbjct: 132 HE-DSNGCINYE 142
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
EE KEAF L+DR G+G I + +++ AL NP
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQ--NP 43
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
EE++EAF+++DR+GNG+I+ L + +L N +L+ IIQ +D DG G VDF+
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
+R+AF++FD GFI ++ T + ++G + ++ EL+ +I D D G+V+F+ F
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 77 LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
KEAF L+D++G+G IT L ++ +LD E+L +I E+D DG+GT++FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I +++T++ ++ Q + ELQ +I E D D G + FD F +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 77 LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
KEAF L+D++G+G IT L ++ +LD E+L +I E+D DG+GT++FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I +++T++ ++ Q + ELQ +I E D D G + FD F +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQL-FDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF + D + G ID + MG+L + EL A+I E A+G +NF F +
Sbjct: 15 KEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLTM 70
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
L+ D E + + AF++ D +G G I + L E+L D+ PE++ +
Sbjct: 71 FGEKLKGADPEDV---IMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAF 127
Query: 121 DTDGSGTVDF 130
D +G VD+
Sbjct: 128 PPDVAGNVDY 137
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATH 63
AF++ D G I + +L T F E++ + PD G V++ C + TH
Sbjct: 87 AFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 146
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNP--EDLDGIIQEIDTDGSGTVDF 130
++ KEAF + D+ +G I LRE AA+ +LN E+LD +I+E SG ++F
Sbjct: 12 QDFKEAFTVIDQNRDGIIDKDDLRETFAAM-GRLNVKNEELDAMIKE----ASGPINF 64
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++ FQ+FD G + ++ + L ++G+ + EL + + + F R
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRK 66
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
E E + +AFR D+EGNG I A LR++L L D L +++ +++E+
Sbjct: 67 PIKTPTEQSKEML-----DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV 121
Query: 121 DTDGSGTVDFD 131
G G ++++
Sbjct: 122 SVSGDGAINYE 132
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNP--EDLDGIIQEIDTDGSGTVDF 130
E KEAF LYD++G+G ITT L ++ +L LNP +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSL--GLNPTEAELQDMINEVDADGNGTIDF 65
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF ++D G I T ++ T++ ++G + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLE 66
++
Sbjct: 73 ARIMK 77
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ F+ D K G++ + + I G L + +I+ PD + +V+F GF R+
Sbjct: 31 LHHRFRALDRNKKGYLSRMDLQQI----GALAVNPLGDRIIESFFPDGSQRVDFPGFVRV 86
Query: 61 ATHF--LEEDDAE-----------AMQEELKEAFRLYDREGNGYITTATLREILAAL-DD 106
HF +E++D E + + +L AF+LYD + +G I+ + ++L +
Sbjct: 87 LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146
Query: 107 KLNPEDLDGI----IQEIDTDGSGTVDF 130
++ E L+ I +QE D DG G V F
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSF 174
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
L FR DR GY++ L++I A + L D II+ DGS VDF
Sbjct: 30 RLHHRFRALDRNKKGYLSRMDLQQIGALAVNPLG----DRIIESFFPDGSQRVDF 80
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDD 69
+++ D
Sbjct: 73 ARKMKDTD 80
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 62 THFLEEDDAEAMQEELKEAFR 82
+++ D+E EE++EAFR
Sbjct: 73 ARKMKDTDSE---EEIREAFR 90
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
A A E+L+ AFR +D++G+G+IT LR +A L L E+LD +I+E D D G V+
Sbjct: 1 ARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVN 60
Query: 130 FD 131
++
Sbjct: 61 YE 62
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++ AF+ FD G I ++ + +GQ EL A+I E D D G+VN++ F R+
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++G+G ITT L ++ +L +L +I E+D DG GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF +FD G I T ++ T++ ++GQ + ELQ +I+E D D G ++F F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 71
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E++EAF L+D +G+G I L+ + AL + E++ +I EID DGSGT+DF
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 131 D 131
+
Sbjct: 86 E 86
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF +FDT +G ID ++ + +G E++ +I E D D +G ++F+ F +
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
Query: 61 AT 62
T
Sbjct: 92 MT 93
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
+E M E K AF ++D +G G I+T L ++ L +LD II E+D DGSGT+D
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTID 74
Query: 130 FD 131
F+
Sbjct: 75 FE 76
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ AF MFD G I T ++ T++ +GQ EL A+I E D D +G ++F+ F +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMM 82
Query: 62 THFLEED 68
++ED
Sbjct: 83 VRQMKED 89
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQL-FDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF + D G ID + MG+L + EL A+I E A+G +NF F +
Sbjct: 28 KEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLTM 83
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
L+ D E + + AF++ D +G G I + L E+L + PE++ +
Sbjct: 84 FGEKLKGADPEDV---IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 140
Query: 121 DTDGSGTVDF 130
D +G VD+
Sbjct: 141 PPDVAGNVDY 150
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATH 63
AF++ D G I + +L T G F E++ + PD G V++ C + TH
Sbjct: 100 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 159
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLN--PEDLDGIIQEIDTDGSGTVDF 130
E+ KEAF + D+ +G I LRE AA+ +LN E+LD +I+E SG ++F
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAM-GRLNVKNEELDAMIKE----ASGPINF 77
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQL-FDDTELQALIDENDPDATGKVNFDGFCRI 60
++AF + D G ID + MG+L + EL A+I E A+G +NF F +
Sbjct: 10 KEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLTM 65
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEI 120
L+ D E + + AF++ D +G G I + L E+L + PE++ +
Sbjct: 66 FGEKLKGADPEDV---IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 122
Query: 121 DTDGSGTVDF 130
D +G VD+
Sbjct: 123 PPDVAGNVDY 132
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATH 63
AF++ D G I + +L T G F E++ + PD G V++ C + TH
Sbjct: 82 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNP--EDLDGIIQEIDTDGSGTVDF 130
E+ KEAF + D+ +G I LRE AA+ +LN E+LD +I+E SG ++F
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAM-GRLNVKNEELDAMIKE----ASGPINF 59
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATG--KVNFDGFCR 59
++AFQ+FD G I + ++ +GQ + E+ ++ D + F+ F
Sbjct: 10 KEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLP 69
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + D + E+ E R++D+EGNG + A +R +L L +K+ E+++ ++
Sbjct: 70 MMQTIAKNKD-QGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG 128
Query: 120 IDTDGSGTVDFD 131
+ D +G ++++
Sbjct: 129 HE-DSNGCINYE 139
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
+E E KEAF+L+DR G+G I + +++ AL NP
Sbjct: 2 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQ--NP 40
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATG--KVNFDGFCR 59
++AFQ+FD G I + ++ +GQ + E+ ++ D + F+ F
Sbjct: 12 KEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLP 71
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + D + E+ E R++D+EGNG + A +R +L L +K+ E+++ ++
Sbjct: 72 MMQTIAKNKD-QGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG 130
Query: 120 IDTDGSGTVDFD 131
+ D +G ++++
Sbjct: 131 HE-DSNGCINYE 141
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 68 DDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
D +E E KEAF+L+DR G+G I + +++ AL NP
Sbjct: 2 DFSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQ--NP 42
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 22 STILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAF 81
++++ G +D ++ +L+ D D +G + + F A + +E ++ AF
Sbjct: 369 NSLIQNEGSTIED-QIDSLMPLLDMDGSGSIEYSEFIASAI----DRTILLSRERMERAF 423
Query: 82 RLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+++D++G+G I+T L ++ + D + E+L+ II+++D + G VDF+
Sbjct: 424 KMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFN 473
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
M +AF+MFD +G I T ++ + + EL+++I++ D + G+V+F+ F +
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 61 ATHFLEED 68
+F+ +
Sbjct: 479 LQNFVRNE 486
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L AL ++L+ ED+D II+ ++ D G V ++
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 139
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L AL ++L+ ED+D II+ ++ D G V ++
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 142
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDEND--PDATGKVNFDGFCR 59
+AF+ FD GFI ++ +L +G+ D ++ +I D D G V ++ F +
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 146
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L AL ++L+ ED+D II+ ++ D G V ++
Sbjct: 86 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 140
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L AL ++L+ ED+D II+ ++ D G V ++
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 142
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L AL ++L+ ED+D II+ ++ D G V ++
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 139
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L AL ++L+ ED+D II+ ++ D G V ++
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE 142
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIAT 62
K F+ D +G +L + + ++ +L + +Q +ID D D G+V+F F +
Sbjct: 24 KRFKKLDLDNSG---SLSVEEFM-SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 79
Query: 63 HFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA-----LDDKLNPEDLDGII 117
F + D E ++L+ AFR+YD + +GYI+ L ++L L D + +D I
Sbjct: 80 QFSVKGDKE---QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 136
Query: 118 QEIDTDGSGTVDFD 131
D DG G + F+
Sbjct: 137 INADKDGDGRISFE 150
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM-GQLFDDTELQALIDEN----DPDATGKVNFD 55
+R AF+++D K G+I ++ +L M G DT+LQ ++D+ D D G+++F+
Sbjct: 91 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 150
Query: 56 GFCRIA 61
FC +
Sbjct: 151 EFCAVV 156
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIAT 62
K F+ D +G +L + + ++ +L + +Q +ID D D G+V+F F +
Sbjct: 11 KRFKKLDLDNSG---SLSVEEFM-SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 66
Query: 63 HFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA-----LDDKLNPEDLDGII 117
F + D E ++L+ AFR+YD + +GYI+ L ++L L D + +D I
Sbjct: 67 QFSVKGDKE---QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 123
Query: 118 QEIDTDGSGTVDFD 131
D DG G + F+
Sbjct: 124 INADKDGDGRISFE 137
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM-GQLFDDTELQALIDEN----DPDATGKVNFD 55
+R AF+++D K G+I ++ +L M G DT+LQ ++D+ D D G+++F+
Sbjct: 78 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 137
Query: 56 GFCRIA 61
FC +
Sbjct: 138 EFCAVV 143
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIAT 62
K F+ D +G +L + + ++ +L + +Q +ID D D G+V+F F +
Sbjct: 25 KRFKKLDLDNSG---SLSVEEFM-SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 80
Query: 63 HFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA-----LDDKLNPEDLDGII 117
F + D E ++L+ AFR+YD + +GYI+ L ++L L D + +D I
Sbjct: 81 QFSVKGDKE---QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 137
Query: 118 QEIDTDGSGTVDFD 131
D DG G + F+
Sbjct: 138 INADKDGDGRISFE 151
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM-GQLFDDTELQALIDEN----DPDATGKVNFD 55
+R AF+++D K G+I ++ +L M G DT+LQ ++D+ D D G+++F+
Sbjct: 92 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 151
Query: 56 GFCRIA 61
FC +
Sbjct: 152 EFCAVV 157
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIAT 62
K F+ D +G +L + + ++ +L + +Q +ID D D G+V+F F +
Sbjct: 10 KRFKKLDLDNSG---SLSVEEFM-SLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVS 65
Query: 63 HFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA-----LDDKLNPEDLDGII 117
F + D E ++L+ AFR+YD + +GYI+ L ++L L D + +D I
Sbjct: 66 QFSVKGDKE---QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTI 122
Query: 118 QEIDTDGSGTVDFD 131
D DG G + F+
Sbjct: 123 INADKDGDGRISFE 136
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM-GQLFDDTELQALIDEN----DPDATGKVNFD 55
+R AF+++D K G+I ++ +L M G DT+LQ ++D+ D D G+++F+
Sbjct: 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 56 GFCRIA 61
FC +
Sbjct: 137 EFCAVV 142
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 1 MRKAFQMFD--TAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
+++ F++FD + G +D KI + +G + ++ A + + F+ F
Sbjct: 12 LKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFA-VGGTHKMGEKSLPFEEFL 70
Query: 59 RIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ 118
+ D + + EAF+ +DREG G+I+ A LR +L+ L ++L+ E++D II
Sbjct: 71 PAYEGLM--DCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 128
Query: 119 --EIDTDGSGTVDFD 131
++ D G V ++
Sbjct: 129 LTDLQEDLEGNVKYE 143
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 1 MRKAFQMFD--TAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
+++ F++FD + G +D KI + +G + ++ A + + F+ F
Sbjct: 11 LKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFA-VGGTHKMGEKSLPFEEFL 69
Query: 59 RIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ 118
+ D + + EAF+ +DREG G+I+ A LR +L+ L ++L+ E++D II
Sbjct: 70 PAYEGLM--DCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIIN 127
Query: 119 --EIDTDGSGTVDFD 131
++ D G V ++
Sbjct: 128 LTDLQEDLEGNVKYE 142
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMF-DTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRCMKDD 88
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAA-LDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EL++AFR +D G+G I+T+ LRE + L ++ D++ II+++D +G G VDF+
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 74 QEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+ E K AF ++ ++ +G I+T L +++ L PE+L +I E+D DGSGTVDFD
Sbjct: 17 KNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMF-DTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRCMKDD 88
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 79 EAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ--EIDTDGSGTVDFD 131
EAF+ +DREG G+I+ A LR +L+ L ++L+ E++D II ++ D G V ++
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYE 142
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD TG I I +L GQ A I E + +V+ + F ++
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQ----NPTLAEITEIESTLPAEVDMEQFLQVL 63
Query: 62 THFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEID 121
D EE + F+++D++ G I LR +L +L +KL+ E++D +++ +
Sbjct: 64 NR-PNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122
Query: 122 TDGSGTVDF 130
G V++
Sbjct: 123 VK-DGMVNY 130
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ + +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMF-DTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRCMKDD 88
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R F D +G + + +I L +G ++ ++ + D +A+G++++ F
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAA 118
Query: 61 ATHFLEEDDAEAMQEELKE-AFRLYDREGNGYITTATLREILAALDDKLNP---EDLDGI 116
D +++E+ F+ +D +GNG I+ L+ I DD NP + +D +
Sbjct: 119 TI-----DKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGR-DDIENPLIDKAIDSL 172
Query: 117 IQEIDTDGSGTVDF 130
+QE+D +G G +DF
Sbjct: 173 LQEVDLNGDGEIDF 186
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/72 (18%), Positives = 36/72 (50%)
Query: 59 RIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQ 118
+IA + + + L+ F D + +G +++ + + L + + P D+ +++
Sbjct: 41 KIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLR 100
Query: 119 EIDTDGSGTVDF 130
+ID++ SG + +
Sbjct: 101 DIDSNASGQIHY 112
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
++ AF D G I L++ L G L L+D+ D D +G +++ F
Sbjct: 57 LKAAFLHLDEEGKGNITKLQLRKGLERSG-LMLPPNFDLLLDQIDSDGSGNIDYTEFLAA 115
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLD-----G 115
A D + ++ + AFR++D + +G ITTA L +L + + N + D
Sbjct: 116 AI-----DRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKK 170
Query: 116 IIQEIDTDGSGTVDF 130
+I+E+D +G G +DF
Sbjct: 171 MIREVDKNGDGKIDF 185
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 57 FCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGI 116
F ++A + + + ++LK AF D EG G IT LR+ L L P + D +
Sbjct: 37 FQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLML-PPNFDLL 95
Query: 117 IQEIDTDGSGTVDF 130
+ +ID+DGSG +D+
Sbjct: 96 LDQIDSDGSGNIDY 109
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 69 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 118
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 119 FDRQGRGQIAFD 130
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 52 VNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPE 111
+NF F + T + E D +EE+ +AF+L+D + G I+ L+ + L + L E
Sbjct: 1 MNFGDFLTVMTQKMSEKDT---KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE 57
Query: 112 DLDGIIQEIDTDGSGTV 128
+L +I E D DG G V
Sbjct: 58 ELQEMIDEADRDGDGEV 74
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +TG I + + +G+ D ELQ +IDE D D G+V+ F RI
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 82
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREIL 101
D D TGK++F R+A E E +QE + EA DR+G+G ++ I+
Sbjct: 31 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA----DRDGDGEVSEQEFLRIM 83
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATG--KVNFDGFCR 59
++AF +FD I ++ I+ +GQ + E+ ++ + K+ F+ F
Sbjct: 7 KEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFLP 66
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKL 108
+ D + E+ E R++D+EGNG + A LR +LA L +K+
Sbjct: 67 MLQAAANNKD-QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM 114
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 77 LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGII 117
KEAF L+DR G+ IT + + +I+ AL +++ I+
Sbjct: 6 FKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKIL 46
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 65 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 114
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 115 FDRQGRGQIAFD 126
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 66 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 115
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 116 FDRQGRGQIAFD 127
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 87 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 136
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 137 FDRQGRGQIAFD 148
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 57 FCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGI 116
F ++A + + + E+LK F + D +G GYIT L++ L KL P + D +
Sbjct: 34 FQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKL-PYNFDLL 92
Query: 117 IQEIDTDGSGTVDF 130
+ +ID+DGSG +D+
Sbjct: 93 LDQIDSDGSGKIDY 106
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 40 LIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
L+D+ D D +GK+++ F A D + ++ + AFR++D + +G ITTA L
Sbjct: 92 LLDQIDSDGSGKIDYTEFIAAAL-----DRKQLSKKLIYCAFRVFDVDNDGEITTAELAH 146
Query: 100 ILAALDDKLNPEDLD-----GIIQEIDTDGSGTVDF 130
IL + K N D +I+++D + G +DF
Sbjct: 147 ILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDF 182
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRCMKDD 88
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD + +
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRCMKDD 88
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD + +
Sbjct: 21 KAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MARCMKDD 88
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRSMKDD 88
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRSMKDD 88
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +TG I + + +G+ D ELQ +IDE D D G+V+ F RI
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 72
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTV 128
+EE+ +AF+L+D + G I+ L+ + L + L E+L +I E D DG G V
Sbjct: 10 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREIL 101
D D TGK++F R+A E E +QE + EA DR+G+G ++ I+
Sbjct: 21 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA----DRDGDGEVSEQEFLRIM 73
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L +++ L PE+L +I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 RKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+ AF +F A+ G I T ++ ++ +GQ ELQ +IDE D D +G V+FD F +
Sbjct: 21 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 61 ATHFLEED 68
+++D
Sbjct: 81 MVRSMKDD 88
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 69 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRK 118
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 119 FDRQGRGQIAFD 130
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E ++E++EAF L+D +G G I L+ + AL + E++ +I EID +G+G ++F
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+R+AF +FD TG ID ++ + +G E++ +I E D + TGK+NF F +
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
Query: 61 ATH 63
T
Sbjct: 93 MTQ 95
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 67 EDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSG 126
ED +EEL FR++D+ +G+I L EIL A + + ED++ ++++ D + G
Sbjct: 2 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 61
Query: 127 TVDFD 131
+DFD
Sbjct: 62 RIDFD 66
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 4 AFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
F++FD GFID ++ IL G+ + +++ L+ ++D + G+++FD F ++
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 71
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 88 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRK 137
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 138 FDRQGRGQIAFD 149
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
E KEAF L+D++ NG I+++ L ++ +L + +++ ++ EID DG+ ++F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 36/65 (55%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AF +FD G I + +++T++ ++G + E+ L++E D D ++ F F +
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 62 THFLE 66
+ L+
Sbjct: 73 SRQLK 77
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAM--QEELKEAFRLYDREGNGY 91
+ E+ ++D D D G + + F +A D + + +E L+ AFR++D + +G
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAM------DRKTLLSRERLERAFRMFDSDNSGK 434
Query: 92 ITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
I++ L I D ++ E ++ E+D + G VDFD
Sbjct: 435 ISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 472
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+ +AF+MFD+ +G I + +++TI D ++++ E D + G+V+FD F
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 69 DAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDK--LNPEDLDGIIQEIDTDGSG 126
DA A++ E+ + D + NGYI + + A+D K L+ E L+ + D+D SG
Sbjct: 376 DASAVEHEVDQVLDAVDFDKNGYIEYSEF--VTVAMDRKTLLSRERLERAFRMFDSDNSG 433
Query: 127 TV 128
+
Sbjct: 434 KI 435
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 36 ELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTA 95
E+ ++D D D G + + F +A + +E L+ AFR +D + +G I++
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVAX----DRKTLLSRERLERAFRXFDSDNSGKISST 438
Query: 96 TLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
L I D ++ E ++ E+D + G VDFD
Sbjct: 439 ELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 472
Score = 30.8 bits (68), Expect = 0.23, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+ +AF+ FD+ +G I + +++TI D ++++ E D + G+V+FD F
Sbjct: 420 LERAFRXFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 69 DAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTV 128
DA A++ E+ + D + NGYI + + L+ E L+ + D+D SG +
Sbjct: 376 DASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKI 435
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDA--TGKVNFDGFCR 59
++AF +FD I ++ I +GQ + E+ ++ + + F+ F
Sbjct: 11 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 70
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ D + E+ E R++D+EGNG + A LR +LA L +K+ E+++ +++
Sbjct: 71 MLQAAANNKD-QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG 129
Query: 120 IDTDGSGTVDFD 131
+ D +G ++++
Sbjct: 130 QE-DSNGCINYE 140
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGII 117
++A ++ KEAF L+DR G+ IT + + +I AL +++ I+
Sbjct: 3 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 50
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDA--TGKVNFDGFCR 59
++AF +FD I ++ I +GQ + E+ ++ + + F+ F
Sbjct: 9 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 68
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ D + E+ E R++D+EGNG + A LR +LA L +K+ E+++ +++
Sbjct: 69 MLQAAANNKD-QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG 127
Query: 120 IDTDGSGTVDFD 131
+ D +G ++++
Sbjct: 128 QE-DSNGCINYE 138
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGII 117
++A ++ KEAF L+DR G+ IT + + +I AL +++ I+
Sbjct: 1 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 48
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
+A E+ +AF+++D+E G ++ LR +L L +KL ++D +++ ++ D +G +D+
Sbjct: 1 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
KAFQ+FD TG + + +L +G+ D E+ L+ + D+ G++++ F
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
+A E+ +AF+++D+E G ++ LR +L L +KL ++D +++ ++ D +G +D+
Sbjct: 79 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 138
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
KAFQ+FD TG + + +L +G+ D E+ L+ + D+ G++++ F
Sbjct: 87 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAM--QEELKEAFRLYDREGNGY 91
+ E+ ++D D D G + + F +A D + + +E L+ AFR++D + +G
Sbjct: 404 EHEVDQVLDAVDFDKNGYIEYSEFVTVAM------DRKTLLSRERLERAFRMFDSDNSGK 457
Query: 92 ITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
I++ L I D ++ E ++ E+D + G VDFD
Sbjct: 458 ISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 495
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+ +AF+MFD+ +G I + +++TI D ++++ E D + G+V+FD F
Sbjct: 443 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEF 497
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 69 DAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDK--LNPEDLDGIIQEIDTDGSG 126
DA A++ E+ + D + NGYI + + A+D K L+ E L+ + D+D SG
Sbjct: 399 DASAVEHEVDQVLDAVDFDKNGYIEYSEF--VTVAMDRKTLLSRERLERAFRMFDSDNSG 456
Query: 127 TV 128
+
Sbjct: 457 KI 458
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAM--QEELKEAFRLYDREGNGY 91
+ E+ ++D D D G + + F +A D + + +E L+ AFR++D + +G
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFVTVAM------DRKTLLSRERLERAFRMFDSDNSGK 458
Query: 92 ITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
I++ L I D ++ E ++ E+D + G VDFD
Sbjct: 459 ISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 496
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+ +AF+MFD+ +G I + +++TI D ++++ E D + G+V+FD F
Sbjct: 444 LERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEF 498
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 69 DAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDK--LNPEDLDGIIQEIDTDGSG 126
DA A++ E+ + D + NGYI + + A+D K L+ E L+ + D+D SG
Sbjct: 400 DASAVEHEVDQVLDAVDFDKNGYIEYSEF--VTVAMDRKTLLSRERLERAFRMFDSDNSG 457
Query: 127 TV 128
+
Sbjct: 458 KI 459
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHF 64
F+ DT +G I +++ L++ G F + L+ D + +G++ FD F + HF
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLH-HF 91
Query: 65 LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDG 124
+ ++E FR D G+G + + +R L + +++ + ++++ D
Sbjct: 92 ILS---------MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQR 142
Query: 125 SGTVDFD 131
G++ FD
Sbjct: 143 RGSLGFD 149
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
MR+ F+ D++ G +D+ ++ L + G + QAL+ + D G + FD + +
Sbjct: 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL 154
Query: 61 ATHFLEEDDAEAMQEELKEAFRLYDREGNGYIT 93
+ ++ F YDRE G +T
Sbjct: 155 SIFVC----------RVRNVFAFYDRERTGQVT 177
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EL E FR D +G+G I+ L L++ + + ++ D + SG + FD
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 71 EAMQEELKEAFRLYDREG-NGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
E + E K AF ++ +G I+T L ++ L PE+L I E+D DGSGTVD
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVD 73
Query: 130 FD 131
FD
Sbjct: 74 FD 75
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 1 MRKAFQMFDT-AKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+ AF +F A+ G I T ++ + +GQ ELQ IDE D D +G V+FD F
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++AF +FDT KTG ID ++ + +G E+ L++E D + G + FD F I
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDI 68
Query: 61 ATHFLEEDD 69
T ++ D
Sbjct: 69 MTEKIKNRD 77
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALD-DKLNPEDLDGIIQEIDTDGSGTV 128
+E ++E+KEAF L+D G I L+ + AL D PE L+ ++ E D +G+G +
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILE-LMNEYDREGNGYI 60
Query: 129 DFD 131
FD
Sbjct: 61 GFD 63
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTM----GQLFDDTELQALIDEN----DPDATGKVNF 54
K ++ +DT +GFI+T ++ L + + DDT+L D D + GK+
Sbjct: 107 KTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLEL 166
Query: 55 DGFCRI----ATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
R+ L+ + +E +AF LYD++GNGYI L +L L +K N
Sbjct: 167 TEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK-NK 225
Query: 111 EDLD 114
++LD
Sbjct: 226 QELD 229
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
EE + +R YD + +G+I T L+ L L +K N
Sbjct: 103 EEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANK 138
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++ F D K+G I ++ L +G ++E+ L D D +G +++ F
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 61 ATHF--LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPED--LDGI 116
H +E +D L AF +D++G+GYIT L++ ++ ED ++ +
Sbjct: 89 TLHLNKIERED------HLFAAFTYFDKDGSGYITPDELQQAC----EEFGVEDVRIEEL 138
Query: 117 IQEIDTDGSGTVDFD 131
+++D D G +D++
Sbjct: 139 XRDVDQDNDGRIDYN 153
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 70 AEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGS 125
AE++ EE LKE F D + +G IT L+ L + L ++ + Q D D S
Sbjct: 18 AESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNS 77
Query: 126 GTVDF 130
GT+D+
Sbjct: 78 GTIDY 82
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYIT 93
++E+ A++ D D G +++ F +A + + +++L+ AF+ +D++GNG I+
Sbjct: 389 ESEVDAILGAADFDRNGYIDYSEFVTVAM----DRKSLLSKDKLESAFQKFDQDGNGKIS 444
Query: 94 TATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
L + D L + +I ID++ G VDF+
Sbjct: 445 VDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFE 480
Score = 30.8 bits (68), Expect = 0.24, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 36 ELQALIDENDPDATGKVN----FDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGY 91
EL + D + G+++ DG+ +++ + D ++ E+ D + NGY
Sbjct: 347 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 406
Query: 92 ITTATLREILAALDDK--LNPEDLDGIIQEIDTDGSGTVDFD 131
I + + A+D K L+ + L+ Q+ D DG+G + D
Sbjct: 407 IDYSEF--VTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVD 446
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL-NTMGQLFDDTELQALIDENDPDATGKVNFDGFCR 59
+ FQ D ++G I ++ L N F+ ++++I D + VNF F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 60 IATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQE 119
+ + + + FR YDR+ +G I L++ L+ +L+ + D +I++
Sbjct: 66 VWKYI----------TDWQNVFRTYDRDNSGMIDKNELKQALSGY--RLSDQFHDILIRK 113
Query: 120 IDTDGSGTVDFD 131
D G G + FD
Sbjct: 114 FDRQGRGQIAFD 125
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 41/67 (61%)
Query: 65 LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDG 124
+++D +EEL + FR++D+ +GYI L+ +L A + + +D++ ++++ D +
Sbjct: 5 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 64
Query: 125 SGTVDFD 131
G +D+D
Sbjct: 65 DGRIDYD 71
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 21 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 73 MQEELKEAFRLYDREGNGYITTATLREILAAL-----------DDKLNPED-LDGIIQEI 120
++++LK AF +YD +GNGYI+ A + EI+ A+ +D+ PE + I +++
Sbjct: 97 LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQM 156
Query: 121 DTDGSGTVDFD 131
DT+ G + +
Sbjct: 157 DTNRDGKLSLE 167
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 37/58 (63%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EEL + FR++D+ +GYI L+ +L A + + +D++ ++++ D + G +D+D
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 37/58 (63%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EEL + FR++D+ +GYI L+ +L A + + +D++ ++++ D + G +D+D
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 37/58 (63%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EEL + FR++D+ +GYI L+ +L A + + +D++ ++++ D + G +D+D
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 68 DDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGT 127
DD + E + F+ +D G+G I+ A L E L L + P+++ ++ EIDTDG G
Sbjct: 2 DDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGF 60
Query: 128 VDF 130
+ F
Sbjct: 61 ISF 63
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
+ F+ FD G I ++ L T+G + D E++ ++ E D D G ++F F
Sbjct: 13 RIFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQEFT 67
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 37/58 (63%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EEL + FR++D+ +GYI L+ +L A + + +D++ ++++ D + G +D+D
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
F+MFD G+ID ++ +L G+ + +++ L+ + D + G++++D F
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 1 MRKAFQMFD--TAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
+R+ F +FD + G +D K+ +L +G + TE Q + T K+ +
Sbjct: 11 VREVFDLFDFWDGRDGDVDAAKVGDLLRCLG--MNPTEAQV----HQHGGTKKMGEKAYK 64
Query: 59 --RIATHF--LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLD 114
I + + D +E EAF+ +DREG G I++A +R +L L +++ + +
Sbjct: 65 LEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCN 124
Query: 115 GI 116
I
Sbjct: 125 DI 126
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 46 PDATGKVNFDGFCRIATHFLEEDDAE------------AMQEELKEAFRLYDREGNGYIT 93
P+ +VNF GF R HF +D E + +L AFRLYD + + I+
Sbjct: 72 PEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKIS 131
Query: 94 TATLREILAAL-DDKLNPEDLDGI----IQEIDTDGSGTVDF 130
L ++L + ++ E L I IQE D DG + F
Sbjct: 132 RDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAM--QEELKEAFRLYDREGNGY 91
++E+ A++ D D G +++ F +A D +++ +++L+ AF+ +D++GNG
Sbjct: 106 ESEVDAILGAADFDRNGYIDYSEFVTVAM------DRKSLLSKDKLESAFQKFDQDGNGK 159
Query: 92 ITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
I+ L + D L + +I ID++ G VDF+
Sbjct: 160 ISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFE 197
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 55 DGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDK--LNPED 112
DG+ +++ + D ++ E+ D + NGYI + + A+D K L+ +
Sbjct: 87 DGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEF--VTVAMDRKSLLSKDK 144
Query: 113 LDGIIQEIDTDGSGTVDFD 131
L+ Q+ D DG+G + D
Sbjct: 145 LESAFQKFDQDGNGKISVD 163
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
+EE+ +AFRL+D + +G IT LR + L + L E+L +I E D + +D D
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
KAF++FD +G I + + +G+ + ELQ +I E D + +++ D F RI
Sbjct: 13 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVD 129
Q+E KEAF+L+D++ + +T L ++ AL + + I+++ D D SG D
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFD 68
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
++AFQ+FD + ++ T++ +G ++ ++ + D D +GK + + F I
Sbjct: 17 KEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIM 76
Query: 62 THFLEEDDA 70
+ +E D+
Sbjct: 77 LEYGQEVDS 85
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
Q + D ++ G ++F + IA H A ++L+ AF LYD +GNG I+ +
Sbjct: 66 QHVFRSFDANSDGTLDFKQYV-IALHMT---SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 98 REILAALDDKLNPEDLDGIIQEIDT 122
EI+ A+ ++PED + ++ +T
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+R+AF+ FD K G+I+ + + TMG + + EL L + + + G V+FD F
Sbjct: 12 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
EEL+EAFR +D++ +GYI L + + +L + Q+I+ + G VDFD
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
Q + D ++ G ++F + IA H A ++L+ AF LYD +GNG I+ +
Sbjct: 66 QHVFRSFDANSDGTLDFKQYV-IALHMT---SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 98 REILAALDDKLNPEDLDGIIQEIDT 122
EI+ A+ ++PED + ++ +T
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 40 LIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
+I D D TGK+ F+ F + A KE F D++G+G + LR+
Sbjct: 45 MIAMLDRDHTGKMGFNAF----------KELWAALNAWKENFMTVDQDGSGTVEHHELRQ 94
Query: 100 ILAALDDKLNPEDLDGIIQEIDTDG 124
+ + +L+P+ L I++ +G
Sbjct: 95 AIGLMGYRLSPQTLTTIVKRYSKNG 119
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 40 LIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
L + D D G V+F+ F + + L +QE+L AF LYD +GYIT + +
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRG----TVQEKLNWAFNLYDINKDGYITKEEMLD 162
Query: 100 ILAALDDKLNP------------EDLDGIIQEIDTDGSGTVDFD 131
I+ A+ D + + ++ Q++D + G V D
Sbjct: 163 IMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTID 206
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
Q + D ++ G ++F + IA H A ++L+ AF LYD +GNG I+ +
Sbjct: 67 QHVFRSFDANSDGTLDFKEYV-IALHMT---SAGKTNQKLEWAFSLYDVDGNGTISKNEV 122
Query: 98 REILAALDDKLNPEDLDGIIQEIDT 122
EI+ A+ ++PED + ++ +T
Sbjct: 123 LEIVTAIFKMISPEDTKHLPEDENT 147
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
Q + D ++ G ++F + IA H A ++L+ AF LYD +GNG I+ +
Sbjct: 66 QHVFRSFDANSDGTLDFKEYV-IALHMT---SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 98 REILAALDDKLNPEDLDGIIQEIDT 122
EI+ A+ ++PED + ++ +T
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 40 LIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
+I D D TGK+ F+ F + A KE F D++G+G + LR+
Sbjct: 45 MIAMLDRDHTGKMGFNAF----------KELWAALNAWKENFMTVDQDGSGTVEHHELRQ 94
Query: 100 ILAALDDKLNPEDLDGIIQEIDTDG 124
+ + +L+P+ L I++ +G
Sbjct: 95 AIGLMGYRLSPQTLTTIVKRYSKNG 119
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
Q + D ++ G ++F + IA H A ++L+ AF LYD +GNG I+ +
Sbjct: 66 QHVFRSFDANSDGTLDFKEYV-IALHMT---SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 98 REILAALDDKLNPEDLDGIIQEIDT 122
EI+ A+ ++PED + ++ +T
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
Q + D ++ G ++F + IA H A ++L+ AF LYD +GNG I+ +
Sbjct: 66 QHVFRSFDANSDGTLDFKEYV-IALHMT---SAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 98 REILAALDDKLNPEDLDGIIQEIDT 122
EI+ A+ ++PED + ++ +T
Sbjct: 122 LEIVTAIFKMISPEDTKHLPEDENT 146
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 81 FRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
F+ +D G+G I+++ L + L L + P+++ ++ EIDTDG G + FD
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFD 66
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIA 61
+ F+ FDT G I + ++ L T+G + D E++ ++ E D D G ++FD F A
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFDEFTDFA 72
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 13 TGFIDTLKISTILNTMGQLFDDTELQA----LIDENDPDATGKVNFDGFCRIATHFLEED 68
TG I + +I + F DT+ +A + D + G ++F + IA H
Sbjct: 48 TGRITQQQFQSI---YAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYV-IALH---XT 100
Query: 69 DAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDL 113
A ++L+ AF LYD +GNG I+ + EI+ A+ + PED+
Sbjct: 101 TAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXITPEDV 145
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL---NTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+++ F++ D ++GFI+ ++ +L + G+ +DTE +AL+ D D GK+ D F
Sbjct: 43 VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
Query: 58 CRIATH 63
++
Sbjct: 103 AKMVAQ 108
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 51 KVNFDGFCRIATHFLEEDDAE------------AMQEELKEAFRLYDREGNGYITTATLR 98
+VNF GF R HF +D E + +L AFRLYD + + I+ L
Sbjct: 77 QVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELL 136
Query: 99 EILAAL-DDKLNPEDLDGI----IQEIDTDGSGTVDF 130
++L + ++ E L I IQE D DG + F
Sbjct: 137 QVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 2 RKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
R +F FD KTG +D L +MG + E ++ DP+ G V F F
Sbjct: 728 RASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAF 783
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 73 MQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
M ++++ F+ +D G+G I+ + L + L L + +++ ++ EIDTDG G +DF+
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFN 58
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
M + F+ FDT G I +++ L T+G D E+Q ++ E D D G ++F+ F
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 71 EAMQEELKEAFRLYDREGNGYITTATLREILAAL-----DDKLNPED-LDGIIQEIDTDG 124
E M+++LK F+LYD +GNG I L ++ A+ L+PE+ ++ + +ID +
Sbjct: 89 EKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINN 148
Query: 125 SG 126
G
Sbjct: 149 DG 150
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 78 KEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
K F +D+ +G ++ RE+ A ED+ +EID DG+G ++ D
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNAD 57
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 35 TELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITT 94
T L + D TG V F+ F + L + E+L+ F LYD +GYI
Sbjct: 53 TYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG----TVHEKLRWTFNLYDINKDGYINK 108
Query: 95 ATLREILAALDDKLNP------------EDLDGIIQEIDTDGSGTVDFD 131
+ +I+ A+ D + + +D Q++D + G V D
Sbjct: 109 EEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 157
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHF 64
F +FD GFI + T+L+T + + +L + D + G + FD I
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 65 ---------LEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
L ED+A + +K+ F+L D+ +GYIT RE
Sbjct: 129 YKMMGSMVTLNEDEATP-EMRVKKIFKLMDKNEDGYITLDEFRE 171
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAAL 104
D D G ++F+ F + L ++E+L AF LYD +GYIT + I+A++
Sbjct: 73 DKDNNGFIHFEEFITV----LSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 48 ATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDK 107
+G++ + F +I F E L F ++D++ NG+I +L+
Sbjct: 39 PSGQLAREDFVKIYKQFFPFGSPEDFANHL---FTVFDKDNNGFIHFEEFITVLSTTSRG 95
Query: 108 LNPEDLDGIIQEIDTDGSGTVDFD 131
E L + D + G + FD
Sbjct: 96 TLEEKLSWAFELYDLNHDGYITFD 119
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.027, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYIT 93
+ E+ ++ D D G + + F + + +E L AF+ +D +G+G IT
Sbjct: 360 EAEVDHILQSVDFDRNGYIEYSEFVTVCM----DKQLLLSRERLLAAFQQFDSDGSGKIT 415
Query: 94 TATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
L + + ++ E ++QE D + G VDF+
Sbjct: 416 NEELGRLFGVTE--VDDETWHQVLQECDKNNDGEVDFE 451
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 35 TELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITT 94
T L + D TG V F+ F + L + E+L+ F LYD +GYI
Sbjct: 53 TYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG----TVHEKLRWTFNLYDINKDGYINK 108
Query: 95 ATLREILAALDDKLNP------------EDLDGIIQEIDTDGSGTVDFD 131
+ +I+ A+ D + + +D Q++D + G V D
Sbjct: 109 EEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLD 157
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 35 TELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITT 94
T L + D TG V F+ F + L + E+L+ F LYD +GYI
Sbjct: 56 TYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG----TVHEKLRWTFNLYDINKDGYINK 111
Query: 95 ATLREILAALDDKLNP------------EDLDGIIQEIDTDGSGTVDFD 131
+ +I+ A+ D + + +D Q++D + G V D
Sbjct: 112 EEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 160
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 33.5 bits (75), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 77 LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
L FR DR+G+ + R+ LA L L+ + +G+ ++ D +GSGT+D +
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLE 93
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHF 64
F+ D + +D + L +G + D E + + + D + +G ++ + F R
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA---- 98
Query: 65 LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA 103
L ++A + + AF DR G+G +T LR + +
Sbjct: 99 LRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSG 137
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 35 TELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITT 94
T L + D TG V F+ F + L + E+L+ F LYD +GYI
Sbjct: 89 TYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG----TVHEKLRWTFNLYDINKDGYINK 144
Query: 95 ATLREILAALDDKLNP------------EDLDGIIQEIDTDGSGTVDFD 131
+ +I+ A+ D + + +D Q++D + G V D
Sbjct: 145 EEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 193
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
++++ F+ +D G+G I+ + L + L L + +++ ++ EIDTDG G +DF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFN 57
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
M + F+ FDT G I +++ L T+G D E+Q ++ E D D G ++F+ F
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 70 AEAMQEE----LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGS 125
AE + EE LKE F++ D + +G IT L++ L + +L ++ ++ D D S
Sbjct: 14 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 73
Query: 126 GTVDF 130
GT+D+
Sbjct: 74 GTIDY 78
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRI 60
+++ F+M DT +G I ++ L +G ++E++ L+D D D +G +++ F
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
Query: 61 ATH 63
H
Sbjct: 85 TVH 87
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 40 LIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
+ D D G + F F R F + + E++K AF+LYD G+I L+E
Sbjct: 79 IFDVFDVKRNGVIEFGEFVRSLGVF---HPSAPVHEKVKFAFKLYDLRQTGFIEREELKE 135
Query: 100 ILAAL 104
++ AL
Sbjct: 136 MVVAL 140
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 40 LIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLRE 99
+ D D G + F F R F + + E++K AF+LYD G+I L+E
Sbjct: 79 IFDVFDVKRNGVIEFGEFVRSLGVF---HPSAPVHEKVKFAFKLYDLRQTGFIEREELKE 135
Query: 100 ILAAL 104
++ AL
Sbjct: 136 MVVAL 140
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 34 DTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAM--QEELKEAFRLYDREGNGY 91
+ E+ ++ D D G + + F + D + + +E L AF+ +D +G+G
Sbjct: 86 EAEVDHILQSVDFDRNGYIEYSEFVTVCM------DKQLLLSRERLLAAFQQFDSDGSGK 139
Query: 92 ITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
IT L + + ++ E ++QE D + G VDF+
Sbjct: 140 ITNEELGRLFGVTE--VDDETWHQVLQECDKNNDGEVDFE 177
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAA 103
+EEL AFR++D+ +GYI L EIL A
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRA 33
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM---GQLFDDTELQALIDENDPDATGKVNFDGF 57
++K F+ D +GFI+ ++ +L + G+ D E +A + D D GK+ D F
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEF 103
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 73 MQEELKEAFRLYDREGNGYITTATLREILAALDDKL 108
+ E+LK AF LYD +GYIT + I+ ++ D +
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMM 42
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 74 QEELKEAFRLYDREGNGYITTATLREILAAL-DDKLNPEDLDGIIQEIDTDGSGTVD 129
+EE+ AF+++D G+G I + I+ + ++ L +++ ++E D DG+G +D
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMG-QLFDDTELQALIDENDPDATGKVNFDGF 57
+AF++FD G ID + I+ +G + D E++ + E D D G ++ F
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAAL 104
D + G++ F F + L + E+L+ AF+LYD + +GYIT + +I+ A+
Sbjct: 73 DENKDGRIEFSEFIQA----LSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI 128
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 58 CRIATHFLEEDDAEAMQ-EELKEAFRL----------YDREGNGYITTATLREILAALDD 106
CR+ L+ D + M E KE + + +D + +G + L++ L +
Sbjct: 44 CRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGF 103
Query: 107 KLNPEDLDGIIQEIDTDGSGTVD 129
+LNP+ ++ I + T G T D
Sbjct: 104 RLNPQTVNSIAKRYSTSGKITFD 126
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
R+ F FD+ ++G +D ++ L TMG + + ++ +GK+ FD +
Sbjct: 74 WRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDY 128
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREILAA-----LDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+E+L LD + + + +D +++E+D D
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDED 64
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 65 GDGEVDF 71
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDD---TELQALIDENDPDATGKVNFDGF 57
++K F + D K+GFI+ ++ +IL D E + L+ D D +GK+ + F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
Query: 58 CRI 60
+
Sbjct: 103 STL 105
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAAL------DDKLNPEDLDGII-QEIDTDGSGT 127
++L+ F+LYD +GNG I L I+ A+ ++ + E+ ++ +ID +G G
Sbjct: 88 QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGE 147
Query: 128 VDFD 131
+ +
Sbjct: 148 LSLE 151
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 54 FDGFCRIATHFLEE---DDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
DGF ++AT L++ ++ ++E F ++D++G+G IT + +
Sbjct: 89 LDGFKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 111 EDLDGIIQEIDTDGSGTVDFD 131
ED + + D D SG +D D
Sbjct: 149 EDCEATFRHCDLDNSGDLDVD 169
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 70 AEAMQEELKEAFRLYD-REGN-GYITTATLREILAALDDKL--NPEDLDGIIQEIDTDGS 125
A+ ELK F Y +EG+ ++ L++++ A L P LD + QE+D +G
Sbjct: 2 AQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 126 GTVDFD 131
G V F+
Sbjct: 62 GEVSFE 67
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6-
Phosphate Dehydrogenase Complexed With Structural And
Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
Length = 489
Score = 28.9 bits (63), Expect = 0.92, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
Query: 46 PDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLY 84
PDA ++ D FC HF+ D EL+EA+R++
Sbjct: 408 PDAYERLILDVFCGSQMHFVRSD-------ELREAWRIF 439
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM---GQLFDDTELQALIDENDPDATGKVNFDGF 57
++KAF + D K+GFI+ ++ L + D E +A + + D D G + D F
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102
Query: 58 CRI 60
+
Sbjct: 103 AAM 105
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM---GQLFDDTELQALIDENDPDATGKVNFDGF 57
++KAF + D K+GFI+ ++ L + D E + + D D GK+ D F
Sbjct: 44 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEF 103
Query: 58 CRI 60
+
Sbjct: 104 TAL 106
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDD---TELQALIDENDPDATGKVNFDGF 57
++K F M D K+GFI+ ++ IL D E + L+ D D GK+ D F
Sbjct: 44 VKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
Query: 58 CRIAT 62
+
Sbjct: 104 STLVA 108
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 5 FQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHF 64
F+ D G + ++ +++ + ++ LQ + D D G+++ F + A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV 65
Query: 65 LEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDG 124
E+D ++ + LK ++L D +G+G +T +E + K E + I + D +G
Sbjct: 66 KEQDLSDE-KVGLKILYKLMDADGDGKLT----KEEVTTFFKKFGYEKVVDQIMKADANG 120
Query: 125 SGTV 128
G +
Sbjct: 121 DGYI 124
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 81 FRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
F+ D G+G ++ ++ +++ N + L I + ID DG+G +D
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDL 55
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDD---TELQALIDENDPDATGKVNFDGF 57
++K F + D K+GFI+ ++ +IL D E + L+ D D GK+ + F
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 58 CRI 60
+
Sbjct: 67 STL 69
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFI--DTLKIS-TILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
++KAF + D K+GFI D LK+ + + + D E +A + D D G + D +
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEW 103
Query: 58 CRI 60
+
Sbjct: 104 AAL 106
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 75 EELKEAFRLYD-REGN-GYITTATLREILAALDDKL--NPEDLDGIIQEIDTDGSGTVDF 130
EE+K AF ++ +EG+ I+ L+ ++ L L LD +I+E+D +G G V F
Sbjct: 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSF 64
Query: 131 D 131
+
Sbjct: 65 E 65
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREILAA-----LDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+E+L LD + + + +D +++E+D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKQLKELLQTELSGFLDAQKDVDAVDKVMKELDEN 64
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 65 GDGEVDF 71
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA- 103
D G + F+ F R + F + +++ +F+LYD + G+I +++++ A
Sbjct: 64 DTKHNGILGFEEFARALSVF---HPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 104 -------LDDKLNPEDLDGIIQEIDTDGSGTVD 129
L D + + +D +E DT G +D
Sbjct: 121 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKID 153
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 58 CRIATHFLEEDDAEAMQ-EELKEAFRL----------YDREGNGYITTATLREILAALDD 106
CR+ L+ D + M E KE + + +D + +G + L++ L +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGF 134
Query: 107 KLNPEDLDGIIQEIDTDGSGTVD 129
+L+P+ ++ I + T+G T D
Sbjct: 135 RLSPQAVNSIAKRYSTNGKITFD 157
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
R+ F FDT ++G +D ++ L TMG + ++ + GK+ FD +
Sbjct: 105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDY 159
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAALDD-KLNPEDLDGIIQEIDTDGSGTVDFD 131
EL F D++G+ + +E L L + ++ D + EIDT+GSG V FD
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFD 190
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
++++ D D TGK+ F+ F + + + + ++ +D + +G I ++ L
Sbjct: 61 RSMVAVMDSDTTGKLGFEEFKYLWNNI----------KRWQAIYKQFDTDRSGTICSSEL 110
Query: 98 REILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
A LN + II+ +D SG +DFD
Sbjct: 111 PGAFEAAGFHLNEHLYNMIIRRY-SDESGNMDFD 143
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREILAA-----LDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+E+L LD + + + +D +++E+D +
Sbjct: 6 ETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDEN 65
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 66 GDGEVDF 72
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDD---TELQALIDENDPDATGKVNFDGF 57
++K F + D K GFID ++ +IL D E + L+ D D GK+ + F
Sbjct: 43 VKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 58 CRI 60
+
Sbjct: 103 STL 105
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 76 ELKEAFRLYDREGNGYITTATLREILAAL----DDKLNPEDLD 114
E + +R YD + +GYI+ A L+ L L K+ P LD
Sbjct: 105 EFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLD 147
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREILAA-----LDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+E+L LD + + + +D +++E+D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDEN 64
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 65 GDGEVDF 71
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA- 103
D G + F+ F R + F + +++ +F+LYD + G+I +++++ A
Sbjct: 95 DTKHNGILGFEEFARALSVF---HPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 151
Query: 104 -------LDDKLNPEDLDGIIQEIDTDGSGTVD 129
L D + + +D +E DT G +D
Sbjct: 152 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKID 184
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREILAA-----LDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+E+L LD + + + +D +++E+D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDEN 64
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 65 GDGEVDF 71
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDD---TELQALIDENDPDATGKVNFDGF 57
++K F + D K+GFI+ ++ +IL D E + L+ D D GK+ + F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 58 CRI 60
+
Sbjct: 103 STL 105
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 54 FDGFCRIATHFLEE---DDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
DG+ ++AT L++ ++ ++E F ++D++G+G IT + +
Sbjct: 89 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 111 EDLDGIIQEIDTDGSGTVDFD 131
ED + + D D SG +D D
Sbjct: 149 EDCEATFRHCDLDNSGDLDVD 169
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDD---TELQALIDENDPDATGKVNFDGF 57
++K F + D K+GFI+ ++ +IL D E + L+ D D GK+ + F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 58 CRI 60
+
Sbjct: 103 STL 105
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 54 FDGFCRIATHFLEE---DDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
DG+ ++AT L++ ++ ++E F ++D++G+G IT + +
Sbjct: 89 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 111 EDLDGIIQEIDTDGSGTVDFD 131
ED + + D D SG +D D
Sbjct: 149 EDCEATFRHCDLDNSGDLDVD 169
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 73 MQEELKEAFRLYDREGNGYITTATLREILAALD 105
++ EL+ AF+ D G+GY+T L+ + LD
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLD 37
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREILAA-----LDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+E+L LD + + + +D +++E+D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDEN 64
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 65 GDGEVDF 71
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTM---GQLFDDTELQALIDENDPDATGKVNFDGF 57
++KAF + D K+GFI+ ++ L + D E + + D D GK+ D +
Sbjct: 43 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEW 102
Query: 58 CRI 60
+
Sbjct: 103 TAL 105
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1 MRKAFQMFDTAKTGFI--DTLKIS-TILNTMGQLFDDTELQALIDENDPDATGKVN 53
++KAF D K+GFI D LK+ + + D E +A + D D G +
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1 MRKAFQMFDTAKTGFI--DTLKIS-TILNTMGQLFDDTELQALIDENDPDATGKVN 53
++KAF D K+GFI D LK+ + + D E +A + D D G +
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
>pdb|1WJ4|A Chain A, Solution Structure Of The Ubx Domain Of Kiaa0794 Protein
Length = 124
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 89 NGYITTATLREILAALDDK---LNPEDLDGIIQEIDTDGS 125
+G TAT + L A+D + + PE DG+++ ID +G
Sbjct: 3 SGSSGTATNHQGLPAVDSEILEMPPEKADGVVEGIDVNGP 42
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 71 EAMQEELKEAFRLYD-REGNGY-ITTATLREIL-----AALDDKLNPEDLDGIIQEIDTD 123
E E L F + +EG+ Y ++ L+++L + LD + + + +D I++E+D +
Sbjct: 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDEN 64
Query: 124 GSGTVDF 130
G G VDF
Sbjct: 65 GDGEVDF 71
>pdb|3AHQ|A Chain A, Hyperactive Human Ero1
Length = 465
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 70 AEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGS 125
++ + + +K A Y E N I A E L A+D+ L+ E ++Q D S
Sbjct: 103 SDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDS 158
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 54 FDGFCRIATHFLEE---DDAEAMQEELKEAFRLYDREGNGYITTATLREILAALDDKLNP 110
DG+ ++AT L++ ++ ++E F ++D++G+G IT + +
Sbjct: 89 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 111 EDLDGIIQEIDTDGSGTVDFD 131
ED + + D D SG +D D
Sbjct: 149 EDCEATFRHCDLDDSGDLDVD 169
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL---NTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
++K F + D K+GFI+ ++ L ++ ++ E +A + D D GK+ + F
Sbjct: 43 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 102
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTIL---NTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
++K F + D K+GFI+ ++ L ++ ++ E +A + D D GK+ + F
Sbjct: 44 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 103
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 3 KAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGFC 58
K F FD +GF+ + IL T G TE +A N + ++N+ FC
Sbjct: 69 KXFSHFDNNSSGFLTKNQXKNILTTWGDAL--TEQEANDALNAFSSEDRINYKLFC 122
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
Length = 514
Score = 26.9 bits (58), Expect = 3.6, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 7/39 (17%)
Query: 46 PDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLY 84
PDA ++ D FC HF+ D EL EA+R++
Sbjct: 433 PDAYERLILDVFCGSQMHFVRSD-------ELLEAWRIF 464
>pdb|1GPM|A Chain A, Escherichia Coli Gmp Synthetase Complexed With Amp And
Pyrophosphate
pdb|1GPM|B Chain B, Escherichia Coli Gmp Synthetase Complexed With Amp And
Pyrophosphate
pdb|1GPM|C Chain C, Escherichia Coli Gmp Synthetase Complexed With Amp And
Pyrophosphate
pdb|1GPM|D Chain D, Escherichia Coli Gmp Synthetase Complexed With Amp And
Pyrophosphate
Length = 525
Score = 26.6 bits (57), Expect = 4.3, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 25 LNTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEE 76
LN + +D L AL ENDP+A K+ I F+E D EA++ E
Sbjct: 283 LNIVHVPAEDRFLSALAGENDPEAKRKI-------IGRVFVEVFDEEALKLE 327
>pdb|3R3J|A Chain A, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|B Chain B, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|C Chain C, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|D Chain D, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|E Chain E, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
pdb|3R3J|F Chain F, Kinetic And Structural Characterization Of Plasmodium
Falciparum Glutamate Dehydrogenase 2
Length = 456
Score = 26.6 bits (57), Expect = 4.5, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 26 NTMGQLFDDTELQALIDENDPDATGKVNFDGFCRIATHFLEE 67
N M +++ + I N+ D N GF ++A FLE+
Sbjct: 412 NIMKSIYEQCHNTSKIYLNESDLVAGANIAGFLKVADSFLEQ 453
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 14/65 (21%)
Query: 75 EELKEAFRLYDREGNGYITTAT--------LREILAALDDKLNPEDLDGIIQEIDTDGSG 126
EELK F YD+EG+G ++ +L + LD + +E+D +G G
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMS------TLDELFEELDKNGDG 58
Query: 127 TVDFD 131
V F+
Sbjct: 59 EVSFE 63
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 1 MRKAFQMFDTAKTGFIDTLKISTILNTMGQLFDDTELQALIDENDPDATGKVNFDGF 57
+R+AF +FDT K+G I +++ + + ++ E D + ++FD F
Sbjct: 437 LRRAFNLFDTDKSGKITKEELANLFGLTS--ISEKTWNDVLGEADQNKDNMIDFDEF 491
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 75 EELKEAFRLYDREGNGYITTATLREILAALDDKL 108
EEL + F +D GY+T + ++ IL D L
Sbjct: 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWGDAL 117
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 58 CRIATHFLEEDDAEAMQ-EELKEAFRLY----------DREGNGYITTATLREILAALDD 106
CR+ L+ D + M E KE + + D + +G + L++ L +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISLDTDRSGTVDPQELQKALTTMGF 134
Query: 107 KLNPEDLDGIIQEIDTDGSGTVD 129
+L+P+ ++ I + T+G T D
Sbjct: 135 RLSPQAVNSIAKRYSTNGKITFD 157
>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures
Length = 168
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 7 MFDTAKTGFIDTLKI 21
+ D A+TGF+DTLK+
Sbjct: 80 VHDAARTGFLDTLKV 94
>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX
Length = 166
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 7 MFDTAKTGFIDTLKI 21
+ D A+TGF+DTLK+
Sbjct: 78 VHDAARTGFLDTLKV 92
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 66 EEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAALD-DKLNPEDLDGIIQEIDTDG 124
E+ D E EL + F L IT +LR L + ++ ED G+++E D DG
Sbjct: 31 EKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDG 90
Query: 125 SGTVD 129
G ++
Sbjct: 91 DGALN 95
>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d
Length = 156
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 7 MFDTAKTGFIDTLKI 21
+ D A+TGF+DTLK+
Sbjct: 72 VHDAARTGFLDTLKV 86
>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|D Chain D, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
Length = 166
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 7 MFDTAKTGFIDTLKI 21
+ D A+TGF+DTLK+
Sbjct: 78 VHDAARTGFLDTLKV 92
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 45 DPDATGKVNFDGF-CRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATLREILAA 103
D D G ++F F C ++ E + ++L AF+LYD + NG I+ + I+ A
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGE-----LNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Query: 104 L 104
+
Sbjct: 128 I 128
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 25.8 bits (55), Expect = 6.6, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 45 DPDATGKVNFDGFCRIATHFLEEDDAEAMQ-EELKEAFRLYDREGNGYITTATLREILAA 103
+P ATG FDGF + D E + E+L E ++ G + + + L
Sbjct: 69 EPVATGXPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIV----FGRVIPQRVFDELQP 124
Query: 104 LDDKLNPEDLDGIIQEIDTDGSG 126
+ ++L P D ++QEI G+G
Sbjct: 125 VIERLRP---DLVVQEISNYGAG 144
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 80 AFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
F ++D++G+G IT + + ED + Q D D SG +D D
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVD 169
>pdb|3PFF|A Chain A, Truncated Human Atp-Citrate Lyase With Adp And Tartrate
Bound
Length = 829
Score = 25.8 bits (55), Expect = 7.0, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 95 ATLREILAALDDKLNPEDL 113
A +++L +D+KLNPED+
Sbjct: 147 AKAQKLLVGVDEKLNPEDI 165
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 38 QALIDENDPDATGKVNFDGFCRIATHFLEEDDAEAMQEELKEAFRLYDREGNGYITTATL 97
++++ D D TGK+ F+ F + + ++ + ++ +D + +G I ++ L
Sbjct: 50 RSMVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQAIYKQFDVDRSGTIGSSEL 99
Query: 98 REILAALDDKLNPEDLDGIIQEIDTDGSGTVDFD 131
A LN II+ +G G +DFD
Sbjct: 100 PGAFEAAGFHLNEHLYSMIIRRYSDEG-GNMDFD 132
>pdb|3MWE|A Chain A, Truncated Human Atp-Citrate Lyase With Tartrate Bound
Length = 425
Score = 25.4 bits (54), Expect = 8.5, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 95 ATLREILAALDDKLNPEDL 113
A +++L +D+KLNPED+
Sbjct: 147 AKAQKLLVGVDEKLNPEDI 165
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 77 LKEAFRLYDREGNGYITTATLREILAALDDKLNPEDLDGIIQEIDTDGSGTVDF 130
L+ F D +G + R + L ++ P D + + Q +D D G + F
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAITF 80
>pdb|3MWD|A Chain A, Truncated Human Atp-Citrate Lyase With Citrate Bound
Length = 425
Score = 25.4 bits (54), Expect = 8.6, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 95 ATLREILAALDDKLNPEDL 113
A +++L +D+KLNPED+
Sbjct: 147 AKAQKLLVGVDEKLNPEDI 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.138 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,081,089
Number of Sequences: 62578
Number of extensions: 169608
Number of successful extensions: 1343
Number of sequences better than 100.0: 333
Number of HSP's better than 100.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 535
Number of HSP's gapped (non-prelim): 672
length of query: 131
length of database: 14,973,337
effective HSP length: 88
effective length of query: 43
effective length of database: 9,466,473
effective search space: 407058339
effective search space used: 407058339
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)