Query psy3156
Match_columns 557
No_of_seqs 255 out of 1361
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 17:49:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3156.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3156hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02567 alpha,alpha-trehalase 100.0 2E-144 4E-149 1183.5 49.3 511 3-527 19-548 (554)
2 PRK13271 treA trehalase; Provi 100.0 1E-137 3E-142 1123.4 46.3 478 3-527 52-540 (569)
3 PRK13270 treF trehalase; Provi 100.0 2E-137 5E-142 1115.8 45.1 475 3-525 63-548 (549)
4 PRK13272 treA trehalase; Provi 100.0 7E-137 2E-141 1109.0 44.8 476 3-526 53-539 (542)
5 PF01204 Trehalase: Trehalase; 100.0 5E-139 1E-143 1141.0 28.0 505 10-524 1-512 (512)
6 KOG0602|consensus 100.0 8E-127 2E-131 1022.3 36.0 515 3-530 50-571 (600)
7 COG1626 TreA Neutral trehalase 100.0 1E-100 3E-105 804.3 36.8 481 3-528 62-557 (558)
8 PRK10137 alpha-glucosidase; Pr 100.0 5E-59 1.1E-63 519.9 33.1 376 120-524 327-784 (786)
9 PF03200 Glyco_hydro_63: Manno 100.0 4.2E-40 9.2E-45 374.4 27.6 349 118-523 378-801 (801)
10 KOG2161|consensus 100.0 1E-32 2.2E-37 297.0 24.6 352 119-523 422-847 (849)
11 PF06202 GDE_C: Amylo-alpha-1, 100.0 3.6E-30 7.8E-35 272.7 28.9 323 124-518 19-370 (370)
12 COG3408 GDB1 Glycogen debranch 100.0 8.8E-28 1.9E-32 267.8 25.0 314 130-523 280-607 (641)
13 TIGR01561 gde_arch glycogen de 99.9 1.8E-24 4E-29 238.3 23.8 287 95-452 259-574 (575)
14 TIGR01531 glyc_debranch glycog 99.9 3.7E-21 8.1E-26 223.3 23.8 344 125-521 1022-1462(1464)
15 TIGR01577 oligosac_amyl oligos 99.7 1E-14 2.3E-19 164.6 28.6 306 130-523 290-613 (616)
16 PF05592 Bac_rhamnosid: Bacter 99.5 2.7E-13 5.8E-18 150.0 20.6 318 93-526 118-449 (509)
17 PLN03005 beta-fructofuranosida 99.3 8.1E-10 1.7E-14 117.5 24.5 340 94-517 85-515 (550)
18 PLN02703 beta-fructofuranosida 99.2 3E-09 6.6E-14 114.0 23.6 308 130-517 166-568 (618)
19 PLN02973 beta-fructofuranosida 99.2 7.5E-09 1.6E-13 110.4 25.9 335 94-517 107-536 (571)
20 PF04685 DUF608: Protein of un 99.2 1E-10 2.2E-15 123.9 11.9 249 152-475 31-329 (365)
21 COG3387 SGA1 Glucoamylase and 99.2 3.7E-09 8E-14 118.7 24.1 315 120-528 269-609 (612)
22 PF12899 Glyco_hydro_100: Alka 99.1 5.6E-08 1.2E-12 101.8 24.6 307 130-519 32-429 (436)
23 TIGR01535 glucan_glucosid gluc 98.9 7.1E-07 1.5E-11 100.8 28.2 311 122-526 279-635 (648)
24 KOG3625|consensus 98.6 9.7E-07 2.1E-11 98.9 17.9 334 133-523 1080-1516(1521)
25 COG4354 Predicted bile acid be 98.5 2.1E-05 4.6E-10 85.0 21.9 258 144-477 368-680 (721)
26 PF06824 DUF1237: Protein of u 98.1 0.00027 5.8E-09 75.4 19.3 342 122-520 32-422 (424)
27 COG3459 Cellobiose phosphoryla 97.5 0.0023 4.9E-08 73.6 15.5 303 91-469 558-920 (1056)
28 PF00723 Glyco_hydro_15: Glyco 96.9 0.11 2.3E-06 57.0 21.3 188 316-520 187-447 (448)
29 KOG2119|consensus 96.9 0.022 4.7E-07 63.7 15.5 141 313-469 624-780 (879)
30 COG3538 Uncharacterized conser 96.6 0.23 5.1E-06 51.7 19.2 335 124-523 51-422 (434)
31 cd00249 AGE AGE domain; N-acyl 94.2 8.9 0.00019 40.6 23.4 161 315-491 172-352 (384)
32 PF03632 Glyco_hydro_65m: Glyc 93.0 0.49 1.1E-05 50.6 9.5 92 130-224 28-145 (370)
33 PF07971 Glyco_hydro_92: Glyco 92.8 0.24 5.2E-06 55.0 7.0 172 131-368 111-284 (502)
34 cd00249 AGE AGE domain; N-acyl 92.5 13 0.00029 39.2 19.8 50 323-376 308-357 (384)
35 PF07221 GlcNAc_2-epim: N-acyl 83.8 12 0.00026 39.2 11.9 85 276-375 242-329 (346)
36 PRK13807 maltose phosphorylase 74.0 14 0.00029 43.5 9.1 91 131-224 349-465 (756)
37 COG3537 Putative alpha-1,2-man 73.8 28 0.00061 39.6 10.8 45 131-175 359-403 (768)
38 KOG2429|consensus 73.7 8.2 0.00018 42.8 6.7 68 146-216 324-405 (622)
39 PF08760 DUF1793: Domain of un 70.3 1E+02 0.0022 29.4 13.2 141 323-498 3-152 (171)
40 COG1554 ATH1 Trehalose and mal 65.6 23 0.0005 41.2 8.4 92 131-224 347-474 (772)
41 PF07221 GlcNAc_2-epim: N-acyl 63.4 50 0.0011 34.6 10.1 154 320-493 24-191 (346)
42 PF03663 Glyco_hydro_76: Glyco 52.4 1.9E+02 0.0042 30.8 12.3 195 314-527 88-298 (370)
43 PF03475 3-alpha: 3-alpha doma 45.5 36 0.00078 24.9 3.8 40 313-352 5-44 (47)
44 TIGR01180 aman2_put alpha-1,2- 42.2 3E+02 0.0064 32.3 12.8 79 135-214 353-437 (750)
45 PF13374 TPR_10: Tetratricopep 38.2 78 0.0017 21.2 4.6 33 321-353 3-35 (42)
46 PF13181 TPR_8: Tetratricopept 30.5 1.3E+02 0.0028 19.3 4.5 30 321-350 2-31 (34)
47 COG4225 Predicted unsaturated 29.7 7.1E+02 0.015 26.5 16.7 152 79-260 92-270 (357)
48 PF13176 TPR_7: Tetratricopept 28.5 1.5E+02 0.0032 20.0 4.6 30 323-352 2-31 (36)
49 KOG4125|consensus 28.3 4.7E+02 0.01 28.9 10.2 92 132-224 293-408 (682)
50 PF14716 HHH_8: Helix-hairpin- 26.3 1.7E+02 0.0037 23.0 5.2 36 316-351 1-37 (68)
51 PF08849 DUF1819: Putative inn 25.1 2.3E+02 0.0051 27.1 6.9 68 134-205 117-188 (189)
52 PF08726 EFhand_Ca_insen: Ca2+ 23.3 53 0.0012 26.5 1.7 27 26-52 3-29 (69)
53 COG1331 Highly conserved prote 22.8 1.3E+02 0.0028 34.8 5.1 41 324-369 475-515 (667)
54 COG1331 Highly conserved prote 21.8 1.1E+03 0.024 27.4 12.2 44 324-371 280-323 (667)
55 PF09061 Stirrup: Stirrup; In 21.7 1.4E+02 0.003 23.8 3.6 32 183-215 48-79 (79)
56 PF13249 Prenyltrans_2: Prenyl 21.5 2.2E+02 0.0047 23.9 5.4 39 134-172 20-60 (113)
No 1
>PLN02567 alpha,alpha-trehalase
Probab=100.00 E-value=2.1e-144 Score=1183.49 Aligned_cols=511 Identities=40% Similarity=0.725 Sum_probs=484.2
Q ss_pred hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCC--CCCChHHHHHHHHHhccC-CcccccCCCCCCCCCC-cc
Q psy3156 3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNN--ADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNP-SI 78 (557)
Q Consensus 3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~--~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p-~~ 78 (557)
|++||+++ |+ ||||||||+||.+|++||++|+++.... +++++++|++||++||.+ |+||+.|+|+||+++| +|
T Consensus 19 l~~v~~~~-f~-DsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~~~l~~Fv~~~F~~~g~~l~~~~~~d~~~~p~~~ 96 (554)
T PLN02567 19 LASFGGED-TF-DPKLYVDLPLKFSLSETEKAFDALPRSNINGSVPVEELEEFVAEYFDVAGSDLLPYTPPDFVPEPPGF 96 (554)
T ss_pred HhhhcccC-CC-CCCccCCCCCCCCHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCCcccccCCccccccCcHhH
Confidence 78999999 99 9999999999999999999999998654 467889999999999999 9999999999999999 79
Q ss_pred ccccCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHH
Q psy3156 79 ENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARG 158 (557)
Q Consensus 79 ~~~i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~ 158 (557)
+.+|.|+++|+|+.+||.+|+.|+|+++++|.++|+++||||||||||||||||||+||||||||++||+.|+|.++|++
T Consensus 97 l~~i~~~~~r~~a~~i~~lW~~L~R~~~~~v~~~~~~~sli~lp~p~iVPGgRFrE~yyWDSy~i~~GLl~s~~~~~A~~ 176 (554)
T PLN02567 97 LPKVENPEAREWALKVHSLWKNLARKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYWVIRGLLASKMYETAKG 176 (554)
T ss_pred hhhcCChHHHHHHHHHHHHHHHhccccCcccccCCCcCCcccCCCCeEccCCCcCccchHHHHHHHHHHHhCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccc-cccc-cCCcee
Q psy3156 159 VIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHM-VTVE-KNGKYY 236 (557)
Q Consensus 159 ~i~nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~-~~~~-~~G~~~ 236 (557)
||+||+++|+++||||||+|+||++|||||+|++||++|+++++|++||++++|+|++||+|||++|+ +.+. .+|..+
T Consensus 177 mi~Nf~~~i~~~GfIPNg~R~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~~~~~v~i~~~~g~~~ 256 (554)
T PLN02567 177 VVENLLYLVDTYGFVPNGARAYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTSGRHTVTIRDANGVVH 256 (554)
T ss_pred HHHHHHHHHHHcCcCCCCCcccccCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcCCcceeeecCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999754 4443 357777
Q ss_pred eeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHH
Q psy3156 237 TMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLN 316 (557)
Q Consensus 237 ~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLN 316 (557)
+|+||++...+||||||++|+.++...+++++++++|++|+++||||||||+||+. + ..+|.+|+|++|+|||||
T Consensus 257 ~L~rY~~~~~~PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~--~---~~~l~ti~t~~i~pVDLN 331 (554)
T PLN02567 257 VLSRYYAMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMR--D---GSNLTTLRTTSILPVDLN 331 (554)
T ss_pred CCcccccCCCCCCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhcc--c---cccccccccccccCccHH
Confidence 89999999999999999999999988887788999999999999999999999995 2 377999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcc-------------cccccccc
Q psy3156 317 AILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKP-------------RNYFYVSN 383 (557)
Q Consensus 317 a~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~-------------~~~~~~s~ 383 (557)
||||+++++||+|++.+|+.++|++|+++|++++++|+++|||+++|+|+|||+.+++. +..+++++
T Consensus 332 a~L~~~e~~LA~la~~lG~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~~~~~~~~~~~~~~~~~~~s~ 411 (554)
T PLN02567 332 AFLLKMELDIAFFAKLLGDKATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDAENQNTNVYASN 411 (554)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCcccCeEEeeccccccccccccccccccccccCccHHH
Confidence 99999999999999999999999999999999999999999999999999999988753 37889999
Q ss_pred hHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHH
Q psy3156 384 ITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQV 463 (557)
Q Consensus 384 ~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~l 463 (557)
|+|||+|++++ .+.++.+++++|++++++. |||||||+.++++|||+||+|||+|||+++||++||+.+|+++
T Consensus 412 f~PLw~g~~~~-~~~~a~~v~~~l~~~~l~~------pgGiptsl~~sg~qWdgPn~W~pl~~l~i~GL~~yG~~ea~~l 484 (554)
T PLN02567 412 FVPLWCGVVPP-GDAKVEKVVESLKSSGLVL------PAGIATSLRNTGQQWDFPNAWAPLQHMIVEGLAASGSKEGKAL 484 (554)
T ss_pred HHHHHcCCCCh-hhHHHHHHHHHHHhccCcc------CCcccCCCCCccccCCCCCcCHhHHHHHHHHHHHcCChHHHHH
Confidence 99999999997 2347889999998777775 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHHcccc
Q psy3156 464 AYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTI 527 (557)
Q Consensus 464 A~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~ 527 (557)
|++||+|||+++++.|.++|.|+||||+.++++.|+||||++|+||||||||+|+|+.+||..-
T Consensus 485 A~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~ 548 (554)
T PLN02567 485 AEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPE 548 (554)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999753
No 2
>PRK13271 treA trehalase; Provisional
Probab=100.00 E-value=1.4e-137 Score=1123.35 Aligned_cols=478 Identities=34% Similarity=0.606 Sum_probs=442.5
Q ss_pred hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCCCCCChHHHHHHHHHhccCCcccccCCCCCCCCCCcccccc
Q psy3156 3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKI 82 (557)
Q Consensus 3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~Fv~~~F~~~~~~~~~~~~d~~~~p~~~~~i 82 (557)
|++||+++||+ ||||||||+||.+|++||++|+... +.+.++|++||++||....|++.|+|+|+
T Consensus 52 l~~Vq~a~~f~-DsKtFvD~~~~~~p~~il~~f~~~~----~~~~~~l~~Fv~~~F~~p~e~~~~~~~~~---------- 116 (569)
T PRK13271 52 FNDVQNAKLFP-DQKTFADAVPNSDPLMILADYRMQQ----NQSGFDLRHFVNVNFTLPKEGEKYVPPEG---------- 116 (569)
T ss_pred HHHHHHhcCcC-CCccccCCCCCCCHHHHHHHHHhcc----CCCHHHHHHHHHHhCCCCccccccCCCcc----------
Confidence 79999999999 9999999999999999999997542 35689999999999998347898888773
Q ss_pred CCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHHH
Q psy3156 83 SDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIEN 162 (557)
Q Consensus 83 ~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~n 162 (557)
+. ++++||.+|+.|+|+++++ ++.+||||||||||||||||||+||||||||++||+.|||.++|++||+|
T Consensus 117 --~~---~~~~i~~lW~~L~R~~~~~----~~~~sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~N 187 (569)
T PRK13271 117 --QS---LREHIDGLWPVLTRSTENT----EKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVAN 187 (569)
T ss_pred --HH---HHHHHHHHHHHhcCcCCCC----CCCCceecCCCCeEecCCCcchhhhhHHHHHHHhhHhcCCHHHHHHHHHH
Confidence 23 4679999999999999754 45899999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHc-----------ccccccc
Q psy3156 163 IISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKR-----------HMVTVEK 231 (557)
Q Consensus 163 f~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~-----------R~~~~~~ 231 (557)
|+++|+++||||||+|+||++|||||||+.||.+|+++++| +||++++|.|+|||+|||++ |.|.+.
T Consensus 188 f~~~i~~yG~IPNg~R~YYl~RSQPP~l~~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~Wm~~~~~~~~~~~~~r~v~~~- 265 (569)
T PRK13271 188 FAHEIDTWGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMEGVENLQPGQQEKRVVKLQ- 265 (569)
T ss_pred HHHHHHHhCcCcCCchhhcccCCCChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHhCCCcccCccccccceEEeC-
Confidence 99999999999999999999999999999999999999887 69999999999999999997 444442
Q ss_pred CCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCccccccccc
Q psy3156 232 NGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSII 311 (557)
Q Consensus 232 ~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~ 311 (557)
+| ++|+||+++.++||||||+||+.++.+.. .+++.++|++|+++|||||||||||+. +..+|.+|+|++|+
T Consensus 266 ~~--~~L~rY~~~~~~PRpEsy~eD~~~a~~~~-~~~~~~~y~~l~a~aESGwDfSsRw~~-----~~~~l~~i~t~~Ii 337 (569)
T PRK13271 266 DG--TLLNRYWDDRDTPRPESWVEDIATAKSNP-NRPATEIYRDLRSAAASGWDFSSRWMD-----NPQQLNTIRTTSIV 337 (569)
T ss_pred CC--CcccccccCCCCCCCCcHHHHHHHHhhCC-cchHHHHHHHHHHHhhcCCcchhhhcc-----CCcccccccccccc
Confidence 44 68999999999999999999999998774 355678999999999999999999995 24789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhcc
Q psy3156 312 PVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLS 391 (557)
Q Consensus 312 pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~ 391 (557)
|||||||||+++++||++++++|+.+++++|+++|++++++|+++|||++.|+|+|||+.+++++..+++++|+|||+|+
T Consensus 338 PVDLNALLy~ae~~LA~la~~lGd~~~A~~y~~~A~~rr~AI~~~LWnee~G~f~DYDl~~~~~r~~~saa~f~PLwag~ 417 (569)
T PRK13271 338 PVDLNALMFKMEKILARASKAAGDNAMANQYETLANARQKAIEKYLWNDKEGWYADYDLKSHKVRNQLTAAALFPLYVNA 417 (569)
T ss_pred CchHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHhcccCCCCEEEEEECCCCCEeechhHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy3156 392 YKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKW 471 (557)
Q Consensus 392 ~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~ 471 (557)
+++ +++++|++.+. ++++. +|||||++.++++|||+||+|||+|||+++||++||+. ++|++||+||
T Consensus 418 a~~---~qA~~Vv~~l~-~~Ll~------pgGLpTt~~~SgqQWD~PngWaPlq~iiieGL~~yG~~---~lA~~la~rw 484 (569)
T PRK13271 418 AAK---DRANKVAAATK-THLLQ------PGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQK---EVAMDVTWRF 484 (569)
T ss_pred CCH---HHHHHHHHHHH-HhcCC------CCCccCCCCCCCCCCcCcccCHhHHHHHHHHHHHcCCH---HHHHHHHHHH
Confidence 997 88999998876 56776 99999999999999999999999999999999999998 5999999999
Q ss_pred HHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHHcccc
Q psy3156 472 LFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTI 527 (557)
Q Consensus 472 l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~ 527 (557)
++++++.|.++|.|+||||+...|.+||||||++|+||||||||+|++|..|+.+.
T Consensus 485 l~~~~~~~~~~g~m~EKYd~~~~G~~gGGGeY~~q~GFGWTNgV~L~lL~~~~~~~ 540 (569)
T PRK13271 485 LTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKE 540 (569)
T ss_pred HHHHHHHhcccCceEEeeCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHHHhcCccc
Confidence 99999999999999999999766677889999999999999999999999998764
No 3
>PRK13270 treF trehalase; Provisional
Probab=100.00 E-value=2.4e-137 Score=1115.80 Aligned_cols=475 Identities=33% Similarity=0.598 Sum_probs=438.4
Q ss_pred hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCCCCCChHHHHHHHHHhccCCcccccCCCCCCCCCCcccccc
Q psy3156 3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEAGNELQVWSPPDFTSNPSIENKI 82 (557)
Q Consensus 3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~Fv~~~F~~~~~~~~~~~~d~~~~p~~~~~i 82 (557)
|++||+++||+ ||||||||+||.+|++||++|+++.. .++++|++||++||.. ..+.|+||+++|.
T Consensus 63 l~~Vq~~~lf~-DsKtfvD~~~~~~p~~il~~f~~~~~----~~~~~l~~Fv~~~F~~----p~~~~~~~~~~p~----- 128 (549)
T PRK13270 63 FEHVQSSKIFP-DSKTFPDCAPKMDPLDILIRYRKVRR----HRDFDLRKFVENHFWL----PEVYSSEYVSDPQ----- 128 (549)
T ss_pred HHHHHHhcCCC-CCCcCCCCCCCCCHHHHHHHHHHccc----CCHHHHHHHHHHhCCC----CCCCccccccCHH-----
Confidence 79999999999 99999999999999999999999863 4589999999999987 1245778887663
Q ss_pred CCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHHH
Q psy3156 83 SDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIEN 162 (557)
Q Consensus 83 ~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~n 162 (557)
. +|+.+||.+|+.|+|+++ .+|+.+||||||||||||||||||+||||||||++||+.|||.++|++||+|
T Consensus 129 ----~-~~~~~i~~lW~~L~R~~~----~~~~~~Sli~lp~p~iVPGGRFrE~YYWDSYwi~~GLl~sg~~~~a~~mi~N 199 (549)
T PRK13270 129 ----N-SLKEHIDQLWPVLTREPQ----DHIPWSSLLALPQSYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADN 199 (549)
T ss_pred ----H-HHHHHHHHHhHHhccccc----CCCCcCccccCCCCeEecCCCcccchhhhHHHHHHHhhhcCcHHHHHHHHHH
Confidence 2 899999999999999986 4689999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccc----------cccccC
Q psy3156 163 IISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHM----------VTVEKN 232 (557)
Q Consensus 163 f~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~----------~~~~~~ 232 (557)
|+++|+++||||||+|+||++|||||||++||..|++ .|.+++++++|.|+|||+|||+++. +....+
T Consensus 200 f~~li~~yGfIPNG~R~YYl~RSQPP~l~~Mv~~y~~--~~~~~~~~~lp~l~~E~~fWm~~~~~~~~~~~~~~~v~~~~ 277 (549)
T PRK13270 200 FAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEE--DGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPD 277 (549)
T ss_pred HHHHHHHcCcCcCCchhccccCCCCHhHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHcCCCCccCcccccceeEecCC
Confidence 9999999999999999999999999999999988765 4679999999999999999999865 111135
Q ss_pred CceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccc
Q psy3156 233 GKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIP 312 (557)
Q Consensus 233 G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~p 312 (557)
|. +|+||++..++|||||||+|+.++... ++.++++|++|+++||||||||+||+. + .++|.+|+|++|+|
T Consensus 278 g~--~L~rY~~~~~~PRpEsyreD~~~a~~~--~rp~~~~Y~~lra~aESGWDfSsRW~~--~---~~~L~~i~T~~iip 348 (549)
T PRK13270 278 GS--LLNRYWDDRDTPRDESWLEDVETAKHS--GRPPNEVYRDLRAGAASGWDYSSRWLR--D---TGRLASIRTTQFIP 348 (549)
T ss_pred CC--ccccccCCCCCCCCchhHHHHHhhccc--CCchHHHHHHHHHHHHcCCCchhhccc--C---CcccccccccCcch
Confidence 54 899999999999999999999998764 345578999999999999999999995 2 47899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhccC
Q psy3156 313 VDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSY 392 (557)
Q Consensus 313 VDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~~ 392 (557)
||||||||+++++||+|++++|+.+++++|+++|++++++|+++|||+++|+|+|||++++++ ..+++++|+|||+|++
T Consensus 349 VDLNaiL~~~e~~LA~~a~~lG~~~~a~~~~~~A~~r~~AI~~~LWnee~G~~~DYD~~~~~~-~~~s~a~f~PLwaG~a 427 (549)
T PRK13270 349 IDLNAFLYKLESAIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQL-ALFSAAAIVPLYVGMA 427 (549)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccCcccCeEEecccccCcc-ccccHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999999999887 7899999999999999
Q ss_pred CCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy3156 393 KFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWL 472 (557)
Q Consensus 393 ~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l 472 (557)
++ +++++++++|. ++++. ++|++||+.++++|||+||+|||+|||+++||++||+. ++|++||+||+
T Consensus 428 ~~---~qa~~l~~~l~-~~ll~------pGGl~tS~~~sgqQWD~PN~WaPlqwmiieGL~ryG~~---~lA~~LA~rwl 494 (549)
T PRK13270 428 NH---EQADRLANAVR-SRLLT------PGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDD---LLGDEIARSWL 494 (549)
T ss_pred CH---HHHHHHHHHHH-Hhccc------CCCcCCCCCCCcccCCCCCCCccHHHHHHHHHHHcCCH---HHHHHHHHHHH
Confidence 98 88999999987 46775 99999999999999999999999999999999999998 59999999999
Q ss_pred HHHHhhhhhcCccccccccccc-CCCCCCccccCCCCCcchHHHHHHHHHHHcc
Q psy3156 473 FTNYMGYETSKAMFEKYDVELI-GKTGNGGEYEAQTGFGWTNGFAFELLNRYGK 525 (557)
Q Consensus 473 ~~~~~~~~~tG~m~EkYd~~~~-~~~g~gGey~~q~gFGWTngv~L~ll~~~~~ 525 (557)
+++.+.|.++|.|+||||+.++ +..||||||++|.||||||||+|+||.+||.
T Consensus 495 ~~~~~~~~~~g~m~EKYdv~~~~g~~GgGGEY~~q~GFGWTNGV~l~~l~~yg~ 548 (549)
T PRK13270 495 KTVNQFYQEHHKLIEKYHIAGGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGE 548 (549)
T ss_pred HHHHHHHhhcCeeEEEecCCCCCCCCCCCCCcCCCCCcCcHHHHHHHHHHHhCC
Confidence 9999999999999999999876 4677899999999999999999999999985
No 4
>PRK13272 treA trehalase; Provisional
Probab=100.00 E-value=7e-137 Score=1108.97 Aligned_cols=476 Identities=33% Similarity=0.582 Sum_probs=441.9
Q ss_pred hhhhHhhCCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCCCCCChHHHHHHHHHhccC-CcccccCCCCCCCCCCccccc
Q psy3156 3 QKCKVIGNVFPNDSKSFVDLKLKQPEDVILAKFRALLTNNADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNPSIENK 81 (557)
Q Consensus 3 ~~~vq~~~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p~~~~~ 81 (557)
|++||+++||+ ||||||||+||++|++||++|+++.. .++++|++||++||.. |.|++.+.
T Consensus 53 l~~Vq~a~lf~-DsKtFvD~~~~~~p~~il~~~~~~~~----~~~~~l~~Fv~~~F~~~~~e~~~~~------------- 114 (542)
T PRK13272 53 FQAVQEGELFD-DQKHFVDALPLRDPALINADYLAQHE----HPGFDLRKFVDANFEESPPVQTDAI------------- 114 (542)
T ss_pred HHHHHHhcCCC-CCCcCCCCCCCCCHHHHHHHHHhccC----CcHHHHHHHHHHhCCCCCccccccC-------------
Confidence 79999999999 99999999999999999999997743 4689999999999998 88988642
Q ss_pred cCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHH
Q psy3156 82 ISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIE 161 (557)
Q Consensus 82 i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~ 161 (557)
+.|+.+| ++||.+|+.|+|+++ .+|+.+||||||||||||||||||+||||||||++||+.|||.++|++||+
T Consensus 115 ~~d~~~~---~~i~~lW~~L~R~~~----~~~~~~Sli~lp~p~iVPGGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~ 187 (542)
T PRK13272 115 RQDTALR---EHIDALWPKLVRSQE----QVPAHSSLLALPHPYVVPGGRFREVYYWDSYFTMLGLVKSGQTTLSRQMLD 187 (542)
T ss_pred CCCHHHH---HHHHHHHHHhccccC----CCCCcCccccCCCCeeecCCCccchhhhHHHHHHHhhhhcCcHHHHHHHHH
Confidence 3577776 689999999999985 478999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHcccc---------ccc-c
Q psy3156 162 NIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMV---------TVE-K 231 (557)
Q Consensus 162 nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~---------~~~-~ 231 (557)
||+++|+++||||||+|+||++|||||||+.||.+|+++++|..+ ++++|.|+|||+|||++++. .+. .
T Consensus 188 Nf~~~i~~yGfIPNG~R~YYl~RSQPP~l~~Mv~~~~~~t~d~~~-~~~lp~l~kEy~~Wm~~~~~~~~~~~~~~~v~~~ 266 (542)
T PRK13272 188 NFAYLIDTYGHIPNGNRTYYLSRSQPPFFSYMVELQAGVEGDAAY-QRYLPQLQKEYAYWMQGSDDLQPGQAARHVVRLA 266 (542)
T ss_pred HHHHHHHHcCcCcCCchhccccCCCchhHHHHHHHHHHhcChHHH-HHHHHHHHHHHHHHcCCCCCCCCccccceeEecC
Confidence 999999999999999999999999999999999999999999876 78999999999999998731 111 2
Q ss_pred CCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCccccccccc
Q psy3156 232 NGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSII 311 (557)
Q Consensus 232 ~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~ 311 (557)
+| ++|+||++..++||||||+||+.++.... +++++++|++|+++|||||||||||+. + .++|.+|+|++|+
T Consensus 267 ~g--~~L~rY~~~~~~PRpEsy~eD~~~a~~~~-~~~~~~~Y~~l~a~aESGWDfSsRw~~--~---~~~L~~i~t~~Iv 338 (542)
T PRK13272 267 DG--SLLNRYWDERDTPRPEAWLHDTRTAAEAK-DRPAAEVYRDLRAGAESGWDYSSRWLA--D---GKTLASIRTTAIV 338 (542)
T ss_pred CC--cchhhhcCCCCCCCChHHHHHHHHhcCcc-cCcHHHHHHHHHHHHhcCCCchhhhcc--c---cccccccCccccc
Confidence 45 58999999999999999999999997763 466789999999999999999999995 2 4789999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhcc
Q psy3156 312 PVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLS 391 (557)
Q Consensus 312 pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~ 391 (557)
|||||||||+++++||++++.+|+.+++++|+++|++++++|+++|||+ .|+|+|||+++++++..+++++|+|||+|+
T Consensus 339 pVDLNalL~~~e~~LA~~~~~lG~~~~a~~~~~~A~~r~~aI~~~lWde-~G~~~DYD~~~~~~~~~~s~a~f~PLwag~ 417 (542)
T PRK13272 339 PVDLNSLLYHLERTLAQACASSGLAACSQDYAALAQQRKQAIDAHLWNP-AGYYADYDWQTRTLSEQVTAAALYPLFAGL 417 (542)
T ss_pred CccHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccCc-CceEEeeccCCCCccccccHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999998 899999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy3156 392 YKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKW 471 (557)
Q Consensus 392 ~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~ 471 (557)
+++ +++++++++|+ ..++. +|||||++.++++|||+||+|||+|||+++||++||+. ++|++||+||
T Consensus 418 a~~---~~a~~l~~~l~-~~~l~------~gGlpTt~~~sgqQWD~PN~WaPlq~i~i~GL~~yG~~---~lA~~La~rw 484 (542)
T PRK13272 418 ASD---DRAKRTADSVR-AQLLR------PGGLATTALKTGQQWDEPNGWAPLQWVAVDGLRRYGED---ALARTIGERF 484 (542)
T ss_pred CCH---HHHHHHHHHHH-HhccC------CCCcCCCCCCccccCCCCCccHhHHHHHHHHHHHcCCH---HHHHHHHHHH
Confidence 998 88999999887 45665 89999999999999999999999999999999999998 5999999999
Q ss_pred HHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHHccc
Q psy3156 472 LFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKT 526 (557)
Q Consensus 472 l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~ 526 (557)
++++.+.|.++|.|+||||+...+..|+||||++|+||||||||+|+||.+||..
T Consensus 485 l~~~~~~~~~~g~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNgV~L~lL~~yg~~ 539 (542)
T PRK13272 485 LAQVQALFAREHKLVEKYGLDGNAAGGGGGEYALQDGFGWTNGVTLMLLNLYPPG 539 (542)
T ss_pred HHHHHHHHhhcCceeEEeecCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhccc
Confidence 9999999999999999999887776788899999999999999999999999864
No 5
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=100.00 E-value=5.1e-139 Score=1140.97 Aligned_cols=505 Identities=46% Similarity=0.854 Sum_probs=403.3
Q ss_pred CCCCCCCCccCCCCCCCCHHHHHHHHHHhhhCC--CCCChHHHHHHHHHhccC-CcccccCCCCCCCCCCc-cccccCCH
Q psy3156 10 NVFPNDSKSFVDLKLKQPEDVILAKFRALLTNN--ADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNPS-IENKISDA 85 (557)
Q Consensus 10 ~~f~~dsKtfvD~~~~~~~~~~l~~f~~~~~~~--~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p~-~~~~i~d~ 85 (557)
+||+ ||||||||++|.+|++|+++|++++..+ +++++++|++||++||.. |.|++.|+|+||+++|+ |+++|.|+
T Consensus 1 k~f~-d~k~fvD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~f~~~G~el~~~~~~d~~~~~~~~~~~i~~~ 79 (512)
T PF01204_consen 1 KLFP-DSKTFVDMPMKNDPDEILAAFKKLFWNTLTRNISKFDLKQFVEDHFDEPGSELEPWTPPDWKEDPPYFLSRISDP 79 (512)
T ss_dssp TSSS-STHHHHT-EESS-HHHHHHHHHHHHTS------TT--HHHHHHHHEE------------S------------TT-
T ss_pred CcCC-CCCeeeCCCCCCCHHHHHHHHHHhhhhccccCCCHHHHHHHHHHhCcCccccccccCCcccCCCCccccccCCCc
Confidence 6899 9999999999999999999999998774 577899999999999999 99999999999999999 99999999
Q ss_pred HHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHH
Q psy3156 86 KYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIIS 165 (557)
Q Consensus 86 ~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~ 165 (557)
++|+|+.+||++|+.|+|+++++|.++|+++|+||||||||||||||||+||||||||++||++|||.++|++||+||++
T Consensus 80 ~~~~~~~~l~~~W~~l~r~~~~~~~~~~~~~sli~lp~p~iVPGGRF~E~YyWDSYfi~~GLl~s~~~~~a~~mi~Nf~~ 159 (512)
T PF01204_consen 80 ELRKWAQHLHQLWKDLGRKIKPDVKDNPERYSLIPLPNPYIVPGGRFREMYYWDSYFIILGLLASGMYETAKGMIENFLY 159 (512)
T ss_dssp -HH---HHHHHHTTTTEE------SS--TT-SB---SS-EE--BTTB-S-BHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
T ss_pred hhhHHHHHhcccCchheeeccCCccccccccccccCCCCeEeeCCCcccchhHhHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-HccccccccCCceeeeEEeeCC
Q psy3156 166 LVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWM-KRHMVTVEKNGKYYTMARYYAP 244 (557)
Q Consensus 166 ~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~-~~R~~~~~~~G~~~~L~rY~~~ 244 (557)
+|+++||||||+|+||++|||||||++||.+||++|+|++|+++++|+|++||+||| .+|.+.+...++.++|+||+++
T Consensus 160 ~i~~yGfipNg~R~Yyl~RSQPPlla~mV~~~y~~t~d~~~l~~~lp~L~ke~~fW~~~~r~~~~~~~~~~~~l~ry~~~ 239 (512)
T PF01204_consen 160 LIDRYGFIPNGNRTYYLNRSQPPLLAQMVREYYEATKDKAFLREALPALEKEYEFWMDNNRDVRVTGLGKGYGLNRYGDP 239 (512)
T ss_dssp HHHHHSS--SBSBGGGTT---S--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHCCCEEETTEEEECTSEECCHHHHC
T ss_pred HHHHhCcCCCCccHHhccCCCCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCCCCcceeecCCCccCCcccccCC
Confidence 999999999999999999999999999999999999999999999999999999999 5777766666677999999999
Q ss_pred CCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHH
Q psy3156 245 SRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNAN 324 (557)
Q Consensus 245 ~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~ 324 (557)
.+.||||||++|..++...+++.++..+|++++++||||||||+||+.. .|.+...+.+++|.+|+||||||+||++++
T Consensus 240 ~~~prpEsy~eD~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~-sg~d~~~l~~~~t~~iipVDLNa~L~~~e~ 318 (512)
T PF01204_consen 240 WNSPRPESYREDVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRD-SGFDNSNLFTIRTTDIIPVDLNAILYRNEK 318 (512)
T ss_dssp HHCT-CCCCCHHHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSS-ECCEE-TCHHCECCCEE-HHHHHHHHHHHH
T ss_pred CCCCcchHHHhhHHHHHhhcccchHHHHhhcccchhhhhhhccceeeec-CCCchhhhhccceeeecCchHHHHHHHHHH
Confidence 9999999999999999888767788999999999999999999999973 366667799999999999999999999999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhccCCC-ChHHHHHHH
Q psy3156 325 YLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKF-SKQYVAERV 403 (557)
Q Consensus 325 ~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~~~~-~~~~~a~~v 403 (557)
.||+||++||+.++|+.|+++|++++++|+++|||+++|+|||||+.++++++++++++|+|||+|++++ ++...+.++
T Consensus 319 ~LA~~a~~lG~~~~a~~~~~~A~~~~~aI~~~lWdee~g~~~Dyd~~~~~~~~~~~~a~f~PL~ag~a~~~qa~~~~~~~ 398 (512)
T PF01204_consen 319 DLAEFAELLGDQEKAEEYRQRAEERKEAINQYLWDEEDGFYYDYDLRTGKRSPVFSPANFLPLWAGIASPEQAERLVARA 398 (512)
T ss_dssp HHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHTEETTTTEE--EETTTTEEGG--BGGGGHHHHTT-S-HHHHHHHHHHH
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhCccCCCCeEEeeeCCCCCCcccccHHHHHHHHHhhcCHhhhhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 333334566
Q ss_pred HHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcC
Q psy3156 404 LQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSK 483 (557)
Q Consensus 404 ~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG 483 (557)
++.++..+++. +++|+|+++..+++|||+||||||+|||+++||++||+. ++|++||+|||+++.++|.++|
T Consensus 399 l~~~~~~~~l~-----~~~g~~ts~~~~~~qWD~Pn~WaPlq~~~i~GL~~yG~~---~lA~~la~rwl~~~~~~~~~~g 470 (512)
T PF01204_consen 399 LDYLERSGLLT-----FPGGIPTSLYDTGQQWDGPNVWAPLQWMAIEGLRRYGYR---ELARRLAQRWLRLNYKVFKRTG 470 (512)
T ss_dssp HHHCTTCCSSC------CSECTTCTTTTTSTTSTTEEEHHHHHHHHHHHHHTT-H---HHHHHHHHHHHHHHHHCCCCCS
T ss_pred HHHHHhcCCcc-----cCCCCCCccccccccCCCCCccHhHHHHHHHHHHhCCcH---HHHHHHHHHHHHHHHHHHhhcC
Confidence 77777777776 699999999999999999999999999999999999997 5999999999999999999999
Q ss_pred cccccccccccCCCC-CCccccCCCCCcchHHHHHHHHHHHc
Q psy3156 484 AMFEKYDVELIGKTG-NGGEYEAQTGFGWTNGFAFELLNRYG 524 (557)
Q Consensus 484 ~m~EkYd~~~~~~~g-~gGey~~q~gFGWTngv~L~ll~~~~ 524 (557)
.|+||||+.+++..| +||||++|+||||||||+|++|..||
T Consensus 471 ~m~EKYd~~~~~~~gg~gGeY~~q~GFGWTNgv~l~~l~~yg 512 (512)
T PF01204_consen 471 KMFEKYDVEDGGEPGGGGGEYPVQDGFGWTNGVYLDLLDKYG 512 (512)
T ss_dssp SEBSEEETTTTSCEC-S-SSS---BS-HHHHHHHHHHHHHH-
T ss_pred chhccccceeccccCCCCCcccCCCCCccHHHHHHHHHHhhC
Confidence 999999999877655 88999999999999999999999997
No 6
>KOG0602|consensus
Probab=100.00 E-value=7.8e-127 Score=1022.27 Aligned_cols=515 Identities=47% Similarity=0.857 Sum_probs=493.9
Q ss_pred hhhhHhhCCCCCCCCccCCCCCCCC--HHHHHHHHHHhhhCC--CCCChHHHHHHHHHhccC-CcccccCCCCCCCCCCc
Q psy3156 3 QKCKVIGNVFPNDSKSFVDLKLKQP--EDVILAKFRALLTNN--ADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNPS 77 (557)
Q Consensus 3 ~~~vq~~~~f~~dsKtfvD~~~~~~--~~~~l~~f~~~~~~~--~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p~ 77 (557)
|++||+++.|+ |+|+||||+++.. +..+++.|.++.... ...+.+.|+.||++||+. |.|++.|+|.||.+.|+
T Consensus 50 L~~~~~~k~~~-d~k~fvd~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~fv~e~fd~pg~el~~~~P~d~~~~p~ 128 (600)
T KOG0602|consen 50 LQSVQIAKLYP-DSKIFVDEPLKNEGKPDRLLRTFDELSWSSSTRPVPSEKLQEFVTEYFDAPGKELEIYAPTDWEEMPS 128 (600)
T ss_pred ccchhhcccCC-CchhhhhhhhhccCCcchHHHHHHHhhhhhccCCCCHHHHHHHHHHhccCCCcccccccccccccCcH
Confidence 78999999999 9999999999998 999999999998733 578889999999999987 99999999999999999
Q ss_pred cccccCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHH
Q psy3156 78 IENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSAR 157 (557)
Q Consensus 78 ~~~~i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~ 157 (557)
|+..|+|+.+|.||.+||.+|+.|+|+++.+|..+|+++|+||+|||||||||||+|+||||||||++||+.|+|+++|+
T Consensus 129 ~~~~i~~~~~r~~a~el~~~w~~l~~~i~~~v~~~p~~~sli~v~~PfiVPGgRF~E~YyWDsywii~GLl~S~m~~tak 208 (600)
T KOG0602|consen 129 FLATIADSDVRRLAKELHPEWKKLYRKIAQEVRSNPDRYSLIPVPNPFIVPGGRFRELYYWDSYWIIKGLLASQMFDTAK 208 (600)
T ss_pred HHHhhcchHHHHHHHHhhHHHHhHHHHhhHHHhhCCCcCccccCCCceeccCCceeeeecccHHHHHHhHHhhcccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceee
Q psy3156 158 GVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYT 237 (557)
Q Consensus 158 ~~i~nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~ 237 (557)
|||+||+.+|++|||||||+|+||++|||||+|+.||.+||++|+|.+|+++.+|+|.+||+||+++|+..+..+|+ .
T Consensus 209 GmieNf~~lV~~yG~ipNg~R~YYl~RSQPPllt~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~--~ 286 (600)
T KOG0602|consen 209 GMIENFISLVDTYGFIPNGGRVYYLNRSQPPLLTGMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGK--V 286 (600)
T ss_pred HHHHHHHHHHHhcCcccCCCeeeeeccCCCchhhhhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCc--e
Confidence 99999999999999999999999999999999999999999999999999999999999999999999977765554 7
Q ss_pred eEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHH
Q psy3156 238 MARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNA 317 (557)
Q Consensus 238 L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa 317 (557)
|+||.+...+||||||++|.+++.+..++.+++.+|+++++++|||||||+||+.. . +++.+++|..++|||||+
T Consensus 287 l~~y~~~~~~prPEsy~~d~e~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~--~---~t~~~~~t~~~vpvDLN~ 361 (600)
T KOG0602|consen 287 LSRYRVMGSGPRPESYREDFETAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAV--N---GTLSSIGTTDLVPVDLNL 361 (600)
T ss_pred eEEEeccCCCCCCcchHHHHHHHhcccchHHHHHHHHHHhhcCcccchhHHHhhcc--C---CcccccccccccccchHH
Confidence 99999999999999999999999999999999999999999999999999999962 2 456889999999999999
Q ss_pred HHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhccCCC-Ch
Q psy3156 318 ILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKF-SK 396 (557)
Q Consensus 318 ~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~~~~-~~ 396 (557)
+++.++.+++.++...|+.++++.|+++++.|+.+|+++||||++|+|||||+..++++..+++++|+|||+|++++ .+
T Consensus 362 ~~~~~~~i~~y~~~~~Gd~~~s~~~~~k~~~r~~~i~~vlWde~~g~w~DYd~~~~~~~~~~~~sn~~Pl~~~~~~~~~~ 441 (600)
T KOG0602|consen 362 LYKWNADIMKYFYVVDGDPKDSAQFEKKSEQRRAAIQEVLWDEEDGAWFDYDLELKKHNTYFYASNFAPLWAGCYPAPDD 441 (600)
T ss_pred HHHhhHHHHhhhcccCCChhHHHHHHHHHHHHHHHHHHhccCCCCCcceeccccccccCCCcCchhhhhhhccCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999996 44
Q ss_pred HHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHH
Q psy3156 397 QYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNY 476 (557)
Q Consensus 397 ~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~ 476 (557)
...+++++++|+..+.++ +|+|||+|+.+|++|||+||+|||+|+|+++||+++|..+++++|.+||++|+.+++
T Consensus 442 ~~~~~~v~~~le~~g~~~-----~p~giP~Sl~~s~eQWD~Pn~WaP~q~m~~~gl~~~~~~~~~~~A~kla~~wl~~~~ 516 (600)
T KOG0602|consen 442 DKSVDKVLDYLEKSGALT-----FPGGIPTSLSNSGEQWDFPNGWAPNQHMAIEGLRRAGNQELQEVALKLAQRWLETNF 516 (600)
T ss_pred cchHHHHHHHHHHcCCcC-----CCCCCcccCCCchhhccCCCCCCcceehhhhhhhhcCCHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999998 899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccccccccc-cCCCCCCccccCCCCCcchHHHHHHHHHHHccccCCC
Q psy3156 477 MGYETSKAMFEKYDVEL-IGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTISFN 530 (557)
Q Consensus 477 ~~~~~tG~m~EkYd~~~-~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~~~~ 530 (557)
++|..+|.|+||||++. ++++|+||||.+|.||||||||+|++|.+||++++.+
T Consensus 517 ~~~~~~g~~~EKY~vt~~~~~~G~ggEY~~QeGFGW~Ng~il~~L~~~g~~~~~~ 571 (600)
T KOG0602|consen 517 AVFVDSGGMFEKYDVTRDPGPHGGGGEYEVQEGFGWTNGVILDLLKKYGSDLRRG 571 (600)
T ss_pred hhhcccCceeEeeccccCCCCCCCCCccccccCCCccchhHHHHHHHcCCccccc
Confidence 99999999999999998 6788999999999999999999999999999999874
No 7
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-100 Score=804.30 Aligned_cols=481 Identities=35% Similarity=0.580 Sum_probs=434.2
Q ss_pred hhhhHhhCCCCCCCCccCCCCCCCC-HHHHHHHHHHhhhCCCCCChHHHHHHHHHhccC-CcccccCCCCCCCCCCcccc
Q psy3156 3 QKCKVIGNVFPNDSKSFVDLKLKQP-EDVILAKFRALLTNNADPDTTTLTNFVNEYFEA-GNELQVWSPPDFTSNPSIEN 80 (557)
Q Consensus 3 ~~~vq~~~~f~~dsKtfvD~~~~~~-~~~~l~~f~~~~~~~~~~~~~~l~~Fv~~~F~~-~~~~~~~~~~d~~~~p~~~~ 80 (557)
+++||.+++|+ |.|||+|..++.. |..+|..+.+... .+...++.||..+|.. ... +
T Consensus 62 f~~v~~ak~f~-~~k~f~d~~~~~e~p~~~l~~~~~~~~----~~~~s~r~~v~~~f~~~~~~-~--------------- 120 (558)
T COG1626 62 FQDVQDAKLFP-DHKTFLDEAPSNENPVNILSRYRMEKD----WPGFSLREFVNNSFFLPEST-S--------------- 120 (558)
T ss_pred HHHHHHHhhcc-cceecccccccccCchhHHHhhhccCC----CccccHHHHhhhhccccccC-C---------------
Confidence 57899999999 9999999999998 9999999976553 3457899999999976 222 1
Q ss_pred ccCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccC-CCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHH
Q psy3156 81 KISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTP-NGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGV 159 (557)
Q Consensus 81 ~i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp-~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~ 159 (557)
+...++..++..+|+++|+.|.|+.. .-|+..|||+|| .|||||||||+|+|||||||+++||+.||+.++|++|
T Consensus 121 ~y~~~~~~~~~~~~~~~wp~L~~~~e----~~~k~~sll~lPg~pyvVPGGRF~ElYyWDsYf~~lGL~esgr~d~a~~M 196 (558)
T COG1626 121 KYDPPEQQSLYEHIDQLWPALTREVE----DLPKESSLLPLPGYPYVVPGGRFNELYYWDSYFTMLGLAESGRWDLAKGM 196 (558)
T ss_pred cCCcHHHHHHHHHHHhhcccceeeHh----hcCCccccccCCCCceeCCCcccccchHHHHHHHHHHHhhcCcHHHHHHH
Confidence 12346788889999999999999875 345567999999 5999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHc----------ccccc
Q psy3156 160 IENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKR----------HMVTV 229 (557)
Q Consensus 160 i~nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~----------R~~~~ 229 (557)
++||+++|+++|+||||+|+||++|||||+|+.||..++++.+ .+++++.+|.+.|||.+||.+ +++..
T Consensus 197 v~nF~~~Ie~yG~IpNgnRtYyLsRSQPPff~~Mv~~~~~~~g-~~~~~r~l~~~~key~~w~~~~~~l~~~~~~~~~~~ 275 (558)
T COG1626 197 VDNFAYEIETYGHIPNGNRTYYLSRSQPPFFALMVELVAEHEG-VAALKRYLPALIKEYAYWMDGVPSLQPKQGYSRVVT 275 (558)
T ss_pred HHHHHHHHHHhccccCCceeeEeecCCCCcHHHHHHHHHHhhc-HHHHHHHHHHHHHHHHHHhccCcccCccccceeEEe
Confidence 9999999999999999999999999999999999999999998 478999999999999999983 22223
Q ss_pred ccCCce-eeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccc
Q psy3156 230 EKNGKY-YTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTT 308 (557)
Q Consensus 230 ~~~G~~-~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~ 308 (557)
..+|.. ..|++|+++...||+|||.+|++++.+.+ +...+++|++++|++|||||+|+||+. +.+.|.||++.
T Consensus 276 ~~dG~~pe~ln~y~dd~~tpr~Esy~~t~~~a~~~~-~r~~~eiy~~dRA~reSGwD~ssRw~g-----~~~~LasIrt~ 349 (558)
T COG1626 276 LGDGSPPEVLNRYWDDRDTPRQESYHETIATAKHNP-ERPLDEIYRDDRAGRESGWDFSSRWLG-----VPAPLASIRTT 349 (558)
T ss_pred cCCCCchhhhhhhhcccCCccchhhhhhHHHhhcCc-CCChHhhhcchhhhHhccCcccccccC-----CCccccceecc
Confidence 346642 48999999999999999999999998875 556789999999999999999999995 34789999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHh
Q psy3156 309 SIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLW 388 (557)
Q Consensus 309 ~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~ 388 (557)
.++|||||+++|..+..++++.++.|+.+.++.|.++|+.|+.+|+++||+++.|+|+|||.+.++.+..+++++++|||
T Consensus 350 ~~~p~dlna~~y~~e~~~~~~~~~~~~~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd~k~~~~~~y~~a~~~~plw 429 (558)
T COG1626 350 SILPVDLNALLYKLEEIIANISAIKGDKETAERYQRKAEARRCAINKYLWDDEAGQYNDYDWKLKKRRAYLSAAALWPLW 429 (558)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHccccccceeehhhhhccccccccchhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred hccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHH
Q psy3156 389 TLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLA 468 (557)
Q Consensus 389 ~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la 468 (557)
+|.+++ +|+.++++.+. +.+.. +|||++|...+++|||.||+|+|+|||+++||+|||+. ++|.+||
T Consensus 430 ~G~a~~---era~~~a~~~~-~~l~~------pGGl~ast~~s~~QWD~PNgWaPlq~ia~~gL~ryG~~---~la~~ia 496 (558)
T COG1626 430 VGLATP---ERAQRLADAAL-SMLEQ------PGGLSASTPRSGQQWDYPNGWAPLQWIATQGLKRYGYD---ILADDIA 496 (558)
T ss_pred CCCCCH---HHHHHHHHHHH-HHhcC------CCceecccccccccccCCCCCccHHHHHHHHHHHHhHH---HHHHHHH
Confidence 999998 88888888776 34554 99999999999999999999999999999999999998 5999999
Q ss_pred HHHHHHHHhhhhhcCcccccccccccC-CCCCCccccCCCCCcchHHHHHHHHHHHccccC
Q psy3156 469 EKWLFTNYMGYETSKAMFEKYDVELIG-KTGNGGEYEAQTGFGWTNGFAFELLNRYGKTIS 528 (557)
Q Consensus 469 ~r~l~~~~~~~~~tG~m~EkYd~~~~~-~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~~ 528 (557)
.+|+.++...+..+|.+-||||+.++. .+|+||||+.|+||||||||++.+|.-||....
T Consensus 497 ~rwL~~v~~~~d~~~~~VEKydv~~~~~~~g~~geyp~q~GFGWtNgv~l~lL~~~~~~~~ 557 (558)
T COG1626 497 RRWLTNVEQFYDYEGKLVEKYDVSRGTGPGGGGGEYPLQDGFGWTNGVVLKLLDLYGPHAR 557 (558)
T ss_pred HHHHHHHHHHHhhcccceeEeeecccccCCCCCcccCCcccccchhHHHHHHHHhhCcccC
Confidence 999999999888889999999999665 456679999999999999999999999987653
No 8
>PRK10137 alpha-glucosidase; Provisional
Probab=100.00 E-value=5e-59 Score=519.86 Aligned_cols=376 Identities=19% Similarity=0.287 Sum_probs=295.2
Q ss_pred ccCCCcccCC---CCCCc--chhhHHHHHHHHHHhcCCchhHHHHHHHHHHhh---------hhcCCCCCCc-------c
Q psy3156 120 YTPNGFFIPG---GRFRE--LYYWDTYWIVQGILLCDMKDSARGVIENIISLV---------DQFGFMPNGA-------R 178 (557)
Q Consensus 120 ~lp~pfiVPg---grF~e--~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i---------~~~G~IPng~-------r 178 (557)
-+.|.++||. .+|.. +|.|||.|++.|++.. .+++|++.|+.++..| ++.|+||+.. |
T Consensus 327 ~~~~~~t~Ps~gl~Wf~~~~~W~WDS~~~A~~la~f-dpelA~~~lr~Lf~~Q~~~~d~~r~~~~G~Iph~vf~~~~p~R 405 (786)
T PRK10137 327 AVKFNTVTPSVTARWFSGNQTWPWDTWKQAYAMAHF-NPDVAKENIRAVFSWQIQPDDSVRPQDVGFVPDLIAYNLSPER 405 (786)
T ss_pred ccccCceEeCCCCCCCCCCCccchHHHHHHHHHhhc-CHHHHHHHHHHHHHhhccccCCCCcCCCCeeeEEeccCCCccc
Confidence 3678889998 34888 9999999999999986 4999999999999999 7789999753 3
Q ss_pred -----ccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCC----CCC
Q psy3156 179 -----VYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSR----GPR 249 (557)
Q Consensus 179 -----~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~----~pr 249 (557)
..-...+||||++++|+++|++++|++||++++|.|+++|+||.++|+. +|. ||.+|....+ .+-
T Consensus 406 ~g~~~~~ne~~tqPPL~a~av~~vy~~t~d~~fl~~lyPkL~a~h~Ww~~~RD~----dg~--Gl~eY~~~~~~~h~~~~ 479 (786)
T PRK10137 406 GGDGGNWNERNTKPSLAAWSVMEVYNVTQDKAWLAEMYPKLVAYHDWWLRNRDH----NGN--GVPEYGATRDKAHNTES 479 (786)
T ss_pred ccccccccCCCcCcCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCC----CCC--ceeEeeccccccccccc
Confidence 2334578999999999999999999999999999999999999999984 343 6888865310 000
Q ss_pred ----------Ccchhh----hhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhcc---------------------
Q psy3156 250 ----------PESYRE----DYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIAR--------------------- 294 (557)
Q Consensus 250 ----------pEsy~e----D~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~--------------------- 294 (557)
.-+|.+ -+...... .+......=...++++|||||+|+||..-.
T Consensus 480 g~~~~~i~~~~~~~~~~G~~n~~~~~~~-~~~~~~~~~~~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~ 558 (786)
T PRK10137 480 GEMLFTVKKGDKEETQSGLNNYARVVEK-GQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKF 558 (786)
T ss_pred cccccccccccccccccccccccccccc-cccccccccccccCCCCCCCCCccccccccccccchhhhccccccceeeee
Confidence 000000 00000000 000000011124689999999999995200
Q ss_pred --CCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCC
Q psy3156 295 --DGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKN 372 (557)
Q Consensus 295 --~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~ 372 (557)
++...+.|. ..+..+.+|||||+||.+++.||+||+++|+.++|++|+++|++++++|+++||||++|+|+||++.+
T Consensus 559 ~~~~~~dg~l~-~~p~~~e~VDLNsyLy~a~~~LA~LAe~LG~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~ 637 (786)
T PRK10137 559 AENRSQDGTLL-GYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIED 637 (786)
T ss_pred hhcccCCCCcc-CCCCcCCCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCc
Confidence 001122332 12344559999999999999999999999999999999999999999999999999999999999985
Q ss_pred Cccc----------ccccccchHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccc-----cCCCCCCCC
Q psy3156 373 KKPR----------NYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSL-----FNSTQQWDY 437 (557)
Q Consensus 373 ~~~~----------~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl-----~~sg~qWd~ 437 (557)
+.+. ...++++|+|||+|++++ +++++|+++|.+++.|. .++||||.. .++..||++
T Consensus 638 ~~~~~~~~g~~i~~~~~~~agf~PLwaGia~~---eqA~~VV~~L~~p~~F~-----t~~GipTlS~s~p~ydp~~YWRG 709 (786)
T PRK10137 638 KPLANGCAGKPIVERGKGPEGWSPLFNGAATQ---ANADAVVKVMLDPKEFN-----TFVPLGTAALTNPAFGADIYWRG 709 (786)
T ss_pred ccccccccCcceeeeccCccchhhccCCCCCH---HHHHHHHHHhcChhhcC-----CCCCccCcCCCccccCCCCCCCC
Confidence 4322 245688999999999997 89999999999888887 588999832 234579998
Q ss_pred CCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHH
Q psy3156 438 PNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAF 517 (557)
Q Consensus 438 PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L 517 (557)
| ||||+|||+++||++||+. ++|++|+++|++ +.+.+.++|.|+|||||.+|.+.|+ .+|||||+|+|
T Consensus 710 p-VWpp~N~Li~~GL~rYG~~---e~A~~La~~ll~-~a~~l~~tG~~~E~YDp~TGeg~Ga-------~~FSWTAAvlL 777 (786)
T PRK10137 710 R-VWVDQFYFGLKGMERYGYR---DDALKLADTFFR-HAKGLTADGPIQENYNPLTGAQQGA-------PNFSWSAAHLY 777 (786)
T ss_pred C-cCHhHHHHHHHHHHHcCCH---HHHHHHHHHHHH-HHHHHHhcCceEEeECCCCCcccCC-------CCCChHHHHHH
Confidence 7 9999999999999999998 599999999998 4677899999999999999865544 68999999999
Q ss_pred HHHHHHc
Q psy3156 518 ELLNRYG 524 (557)
Q Consensus 518 ~ll~~~~ 524 (557)
+|++.|.
T Consensus 778 ml~~~~~ 784 (786)
T PRK10137 778 MLYNDFF 784 (786)
T ss_pred HHHHHHh
Confidence 9999874
No 9
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=100.00 E-value=4.2e-40 Score=374.37 Aligned_cols=349 Identities=20% Similarity=0.302 Sum_probs=274.0
Q ss_pred ccccCCCc--ccCC-CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCCC--------------cccc
Q psy3156 118 LIYTPNGF--FIPG-GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNG--------------ARVY 180 (557)
Q Consensus 118 li~lp~pf--iVPg-grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPng--------------~r~y 180 (557)
..+-|.+- .||+ ..|+.-|+||..|+.+-+..- ..++++++|.+++.+++.+|+||.. ..+.
T Consensus 378 ~~~~p~~LfTavPSRsfFPRGFlWDEGFH~L~i~~w-D~dls~eil~sWl~lm~~dGWIpREQILG~EArskVP~eF~vQ 456 (801)
T PF03200_consen 378 VLYWPAPLFTAVPSRSFFPRGFLWDEGFHQLLISRW-DPDLSLEILASWLDLMNEDGWIPREQILGEEARSKVPAEFQVQ 456 (801)
T ss_pred cccCCccceeecCCCCCCCCcCchhhhhhhhhHHHh-CHHHHHHHHHHHHHhccccCCchhhhhcCHhHHhcCCHHHHcC
Confidence 33445553 6888 579999999999998866653 5999999999999999999999974 1356
Q ss_pred ccCCCCcCcHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCC
Q psy3156 181 YLERSQPPLLIPMAASYAKYTG-----------DTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPR 249 (557)
Q Consensus 181 y~~rSQPPl~~~mv~~~~~~t~-----------D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~pr 249 (557)
+....+||-|.+++..+++... +.+||+++||.|.++|.||.+... |..-+.+|+......
T Consensus 457 ~p~~ANPPTl~l~l~~ll~~~~~~~~~~~~~~~~~~~l~~~yp~L~~~~~wf~~tQ~------G~~~~~yrWrGr~~~-- 528 (801)
T PF03200_consen 457 YPSNANPPTLFLALEKLLDRLKAEKKSEDNSEEDLEFLRRIYPRLKRWYNWFNTTQA------GDIPGSYRWRGRDPT-- 528 (801)
T ss_pred CCCCCCCccHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHhhccC------CCCCCceeEcCCCCC--
Confidence 7788899999999999876432 468999999999999998864322 221123343331110
Q ss_pred CcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHH
Q psy3156 250 PESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEW 329 (557)
Q Consensus 250 pEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~l 329 (557)
+... + --...-||+|+.||-.. .......||++|+|+.+...|++|
T Consensus 529 ---------~~~~---------l---np~~L~SGlDDYPRa~~-------------p~~~e~hvDl~sWMa~~a~~M~~I 574 (801)
T PF03200_consen 529 ---------TDRE---------L---NPHTLTSGLDDYPRASH-------------PSDSERHVDLTSWMAFFALNMARI 574 (801)
T ss_pred ---------cccc---------c---cccCcCCCCCCCCCCCC-------------CCccceechHHHHHHHHHHHHHHH
Confidence 0000 0 01345699999998532 223346799999999999999999
Q ss_pred HHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCC-------------------------c----cccccc
Q psy3156 330 WLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNK-------------------------K----PRNYFY 380 (557)
Q Consensus 330 a~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~-------------------------~----~~~~~~ 380 (557)
|..||..+.+.+|.+.++.++++|++.+|||++|+|||+...+. + ....+.
T Consensus 575 A~~L~~~d~~~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~~~~v~l~~~~~~~~~~~~~~~~r~~~~~~~~~~v~~~G 654 (801)
T PF03200_consen 575 ALELGKEDDAYEFFEHFEYISDALNKLHWDEEDGFYYDVGLHPDAVRLEWKEVLENGQFRRELVRVVRGEPQLQLVCHFG 654 (801)
T ss_pred HHHhcCcccHHHHHHHHHHHHHHHHHhcCCcccCceeeeccccccceecccccccccccchhheecccCCccccceeeec
Confidence 99999999998899999999999999999999999999987655 0 123466
Q ss_pred ccchHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccC------C------CCCCCCCCcCcchHHHH
Q psy3156 381 VSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFN------S------TQQWDYPNAWAPLQAFI 448 (557)
Q Consensus 381 ~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~------s------g~qWd~PnvWppl~~~~ 448 (557)
..+++||+++++++ ++++++++++.|.++..|. ++|||+| |+. . ..||+|| ||.|+|||+
T Consensus 655 yvsl~Plll~ll~~-ds~~L~~~L~~l~D~~ef~-----s~yGirS-LSk~~~~y~~~~~e~d~~YWRGp-IW~~~NyL~ 726 (801)
T PF03200_consen 655 YVSLFPLLLGLLPP-DSERLERLLERLLDEDEFW-----SPYGIRS-LSKSDPFYGPGENEHDPSYWRGP-IWIPINYLL 726 (801)
T ss_pred ccCCCchhhccCCC-CHHHHHHHHHHhcChhhcc-----CCCCCcc-ccCCCccccccCCccCCCcccCc-cchhhHHHH
Confidence 67899999999886 3468899999998766555 5999998 542 1 2399999 999999999
Q ss_pred HHHHHhhCc------HHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHH
Q psy3156 449 IQGLDYTQD------KLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNR 522 (557)
Q Consensus 449 i~GL~~yG~------~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~ 522 (557)
++||++|+. ..|++++.+|+++.++++++.|+++|.+||+||+.||.+.|. ....|||+.|++.|.+.
T Consensus 727 i~aL~~y~~~~g~~~~~a~~~y~~Lr~nli~nv~~~~~~tg~~~E~Y~~~tG~g~g~------~~FtGWtslv~~im~e~ 800 (801)
T PF03200_consen 727 IEALRRYGYYYGPYQERAKEIYKELRKNLINNVYKEYKRTGYFWEQYNPETGRGQGA------HPFTGWTSLVVLIMAEQ 800 (801)
T ss_pred HHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHhhcccEEEeECCCCCcccCC------CCCCchHHHHHHHHhcc
Confidence 999999984 346778889999999999999999999999999998865543 34458999999999876
Q ss_pred H
Q psy3156 523 Y 523 (557)
Q Consensus 523 ~ 523 (557)
|
T Consensus 801 Y 801 (801)
T PF03200_consen 801 Y 801 (801)
T ss_pred C
Confidence 5
No 10
>KOG2161|consensus
Probab=100.00 E-value=1e-32 Score=297.04 Aligned_cols=352 Identities=17% Similarity=0.217 Sum_probs=267.3
Q ss_pred cccCCCcccCC-CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCC--------------CccccccC
Q psy3156 119 IYTPNGFFIPG-GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPN--------------GARVYYLE 183 (557)
Q Consensus 119 i~lp~pfiVPg-grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPn--------------g~r~yy~~ 183 (557)
.|.|-+-.||+ ++|+.-+|||-.|+++-.-. -..+++.+++-+++.+++.+|+||. +.-+.|..
T Consensus 422 ~P~~LftaVPSR~~FPRGFyWDEGFH~l~i~~-~D~~~t~Eil~sW~~l~n~DGWi~RE~iLG~EA~skvP~efivQ~~~ 500 (849)
T KOG2161|consen 422 GPRPLFTAVPSRPFFPRGFYWDEGFHQLLIWE-WDFDLTLEILASWFPLMNIDGWIPREQILGTEARSKVPNEFIVQYPD 500 (849)
T ss_pred CCcCccccCCCCCCCCCcceeccchhhhhhhh-cCccchHHHHHHHHhhhcccccchHHHHhhhHHHhhCCchhcccCcc
Confidence 35555668999 78999999999999874443 3588999999999999999999985 23466778
Q ss_pred CCCcCcHHHHHHHHHHHcC------C--HHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhh
Q psy3156 184 RSQPPLLIPMAASYAKYTG------D--TNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYRE 255 (557)
Q Consensus 184 rSQPPl~~~mv~~~~~~t~------D--~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~e 255 (557)
.-+||.+.++|..+++... | .+||++++|.|.+++.||.+... |+ +.++... ..++||.
T Consensus 501 ~aNPPTLllav~~~~~~~~~~~~~~~r~~~fL~r~fprLl~~f~Wf~~sQ~------G~----~~~~~~~---~n~~YrW 567 (849)
T KOG2161|consen 501 NANPPTLLLAVYRLLNREREMYGREDRSLTFLKRLFPRLLKWFTWFRKSQE------GK----NVFEEGF---DNEGYRW 567 (849)
T ss_pred CCCCceeHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhhccc------CC----ccccccc---ccceeEe
Confidence 8899999999999986532 2 48999999999999999985422 21 1111100 1244442
Q ss_pred ---hhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHH
Q psy3156 256 ---DYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLK 332 (557)
Q Consensus 256 ---D~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~ 332 (557)
|..+...+. -+...||+|+-||-+- ....-..|||-|+++.+.+.|-.+|+.
T Consensus 568 rGR~~~~~t~ln------------p~~L~SGlDDyPRAs~-------------Ps~~ElhvDl~~W~~lasrsl~~iae~ 622 (849)
T KOG2161|consen 568 RGRDLPTGTTLN------------PHCLSSGLDDYPRASH-------------PSVLELHVDLRCWVGLASRSLNRIAEF 622 (849)
T ss_pred ccCCCCCCceec------------cccccccccccccccC-------------chHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 222221110 1345699999988542 222345799999999999999999999
Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcc-----------------------------cccccccc
Q psy3156 333 FGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKP-----------------------------RNYFYVSN 383 (557)
Q Consensus 333 lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~-----------------------------~~~~~~s~ 383 (557)
+|..+.-......-.+.++.|.+.+|+|+.++|+|+-..+... ...+...+
T Consensus 623 lg~~~~E~~~a~~e~~~~e~L~~~HW~ee~~~y~D~g~h~~dv~~~~~p~~g~~~r~~~r~v~~~~p~~e~v~~h~GYvS 702 (849)
T KOG2161|consen 623 LGETEAEYATAITELECKENLVQNHWSEEDQAYCDFGNHTEDVSITPEPSIGKQFRGLVRRVDWFVPNLELVDRHIGYVS 702 (849)
T ss_pred hcchhhhhhhhhhHHHHHHHHHHhccChhhCeeeeccCChhhccccccCCcccchhhhheeccccCCcceeeecccceee
Confidence 9987622224555566678899999999999999975543210 01345567
Q ss_pred hHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccC---------C---CCCCCCCCcCcchHHHHHHH
Q psy3156 384 ITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFN---------S---TQQWDYPNAWAPLQAFIIQG 451 (557)
Q Consensus 384 ~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~---------s---g~qWd~PnvWppl~~~~i~G 451 (557)
++|++.++.+. ++.+..++++.|.++..+. .||||+| |+. + ..||||| +|.++|||++.+
T Consensus 703 l~P~mlrLlp~-~S~rL~~~Ldli~D~~~lw-----SpYGlrS-LS~~s~yym~~Nte~d~pYWRGp-IW~N~NYLiLsa 774 (849)
T KOG2161|consen 703 LFPFMLRLLPA-TSPRLTKLLDLISDENELW-----SPYGLRS-LSRSSPYYMKRNTEHDPPYWRGP-IWMNVNYLILSA 774 (849)
T ss_pred hhhhHHhhcCC-CchHHHHHHHHhcCccccc-----Ccchhhh-hhhcCCccccccCCCCCcccccc-eeeehHHHHHHH
Confidence 99999999886 5688999999999888777 6999997 542 1 2489999 999999999999
Q ss_pred HHh-hCc------HHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHH
Q psy3156 452 LDY-TQD------KLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRY 523 (557)
Q Consensus 452 L~~-yG~------~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~ 523 (557)
|++ |.+ ..|++++.+|+.+.+.++.+.|.+||.+||+||+.+|.+.| . .+..|||+.|++.|.+.|
T Consensus 775 L~~~Y~~~~gp~~~nA~~iyeELRaNlv~Nv~k~~~~tG~~wE~Yd~~tG~G~g--a----~~FtGWTaLVl~imse~y 847 (849)
T KOG2161|consen 775 LRHFYLYVPGPYQSNAAKIYEELRANLVGNVSKQWQQTGYFWENYDPRTGRGLG--A----RHFTGWTALVLLIMSENY 847 (849)
T ss_pred HHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHhhccceeeeecCCCCCCccc--c----ccccchHHHHHHHHHhcc
Confidence 999 764 35778999999999999999999999999999999874333 2 467899999999988766
No 11
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=99.97 E-value=3.6e-30 Score=272.73 Aligned_cols=323 Identities=20% Similarity=0.275 Sum_probs=242.2
Q ss_pred CcccCC-CCCCcchhhHHHHHHHHHHh-cCCchhHHHHHHHHHHhhhhcCCCCCCc----cccccCCCCcCcHHHHHHHH
Q psy3156 124 GFFIPG-GRFRELYYWDTYWIVQGILL-CDMKDSARGVIENIISLVDQFGFMPNGA----RVYYLERSQPPLLIPMAASY 197 (557)
Q Consensus 124 pfiVPg-grF~e~yyWDSyfi~~GLl~-s~~~~~a~~~i~nf~~~i~~~G~IPng~----r~yy~~rSQPPl~~~mv~~~ 197 (557)
++|+-| .+|.. |..||++.+.||++ .++++.|+++|..|...+. .|.|||.. ..+|.++..+|+|.+++.+|
T Consensus 19 ~~i~AG~PWF~~-~GRDt~Isl~gl~l~~~~~~~a~~~L~~~~~~~~-~G~ipn~~~~~~~~~Y~s~Dat~wfl~~l~~Y 96 (370)
T PF06202_consen 19 PSIAAGYPWFST-WGRDTFISLPGLLLSPGRFEEARNILATFAGTQR-HGLIPNELRDGEEPRYNSVDATLWFLIALQEY 96 (370)
T ss_pred ceEeccCccccc-cccHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhh-cCcccCcccCCCCCCCCCCccHHHHHHHHHHH
Confidence 566677 57888 99999999999854 5899999999999999886 69999964 57889999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHccc--cccc-cCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHH
Q psy3156 198 AKYTGDTNFIRTHLKSLTNEFEYWMKRHM--VTVE-KNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYS 274 (557)
Q Consensus 198 ~~~t~D~~~l~~~~p~L~ke~~~W~~~R~--~~~~-~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~ 274 (557)
++.|+|.+|+++++|.+++.+++..++.. +.++ .+ +|....
T Consensus 97 ~~~t~D~~~l~~~~~~i~~il~~~~~g~~~~~~~d~~~----gl~~~~-------------------------------- 140 (370)
T PF06202_consen 97 YRWTGDYSFLRELYPAIEEILEWYADGTDFGIRVDPED----GLIYSG-------------------------------- 140 (370)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHhCCCCccccccCC----CeeecC--------------------------------
Confidence 99999999999999999999988776543 2222 12 233211
Q ss_pred HhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHH
Q psy3156 275 ELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIH 354 (557)
Q Consensus 275 ~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~ 354 (557)
.|.. .-.||+...+ +.. +.++.+.+|++|+++|.+.+.++.+++..++. .+..|+++|+++|++|+
T Consensus 141 -------~~~~-~~tWmD~~~~---g~~--~tpr~g~~vEIqal~y~AL~~~~~la~~~~~~-~a~~~~~~A~~lk~~F~ 206 (370)
T PF06202_consen 141 -------NGLN-NQTWMDARND---GRP--VTPRDGAAVEIQALWYNALRFAAELAEKFGDE-LAARYREWAERLKESFE 206 (370)
T ss_pred -------CCCC-CCCccccccC---Ccc--ccCCCCcchHHHHHHHHHHHHHHHHHhhcCCc-hHHHHHHHHHHHHHHHH
Confidence 1111 1235532211 221 24556789999999999999999999987766 78899999999999999
Q ss_pred HhccccccceEEeEEcCCCcccccccccch--HHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCC-
Q psy3156 355 EVLWNEQVGVWLDYDIKNKKPRNYFYVSNI--TPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNS- 431 (557)
Q Consensus 355 ~~lWdee~g~~~D~d~~~~~~~~~~~~s~~--~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~s- 431 (557)
+.||+++.|+|+|....++.+...+.+... +-|+.+++++ ++++++++.+. +++++ |+||+| |+.+
T Consensus 207 ~~FW~~~~g~~~d~ld~~~~~d~~irpN~~~a~~L~~~~l~~---~~a~~vl~~~~-~~L~t------p~GlRT-Ls~~~ 275 (370)
T PF06202_consen 207 KRFWDEDRGYYADALDGDKEPDDSIRPNQLIALSLPPGLLDP---EQAKKVLDRVE-EELLT------PWGLRT-LSPSD 275 (370)
T ss_pred HHHcCCCCCEEEEEecCCCCCCcccccCchhHHhcCCccCCH---HHHHHHHHHHH-HHcCC------CCchhc-ccCCC
Confidence 999999999999986555544444444333 2456677776 89999999875 67887 999998 6532
Q ss_pred ---------------CCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhh--cCccccccccccc
Q psy3156 432 ---------------TQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYET--SKAMFEKYDVELI 494 (557)
Q Consensus 432 ---------------g~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~--tG~m~EkYd~~~~ 494 (557)
..|. .|.|||+++.++++||.++|... +.|.++++..+........+ -|.+.|.||...+
T Consensus 276 ~~Y~p~y~g~~~~rd~sYH-nGsvWpw~~g~~~~al~r~g~~~--~~~~~~~~~ll~~~~~~~~~~~~~~lpEl~dg~~~ 352 (370)
T PF06202_consen 276 PRYNPIYEGDQDSRDMSYH-NGSVWPWDNGIYAEALLRYGFDE--EEAIREAKSLLEGFEEHLQEFGLGRLPELFDGDPP 352 (370)
T ss_pred CCcCCCCCCccccCccccc-CCCcCcCcHHHHHHHHHHhCccc--hHHHHHHHHHHHHHHHHHhhccCCCcchhcCCCCC
Confidence 1234 45599999999999999999842 36666777777655544433 3899999996654
Q ss_pred CCCCCCccccCCCCCcchHHHHHH
Q psy3156 495 GKTGNGGEYEAQTGFGWTNGFAFE 518 (557)
Q Consensus 495 ~~~g~gGey~~q~gFGWTngv~L~ 518 (557)
..+. | + ..++||+|.+|+
T Consensus 353 ~~p~-g--c---~~QAWS~a~ilr 370 (370)
T PF06202_consen 353 HYPR-G--C---SPQAWSVAEILR 370 (370)
T ss_pred CCCC-C--C---HHHHHHHHHhhC
Confidence 3222 1 3 445999999874
No 12
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.8e-28 Score=267.78 Aligned_cols=314 Identities=22% Similarity=0.317 Sum_probs=239.5
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCCCc------cccccCCCCcCcHHHHHHHHHHHcCC
Q psy3156 130 GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGA------RVYYLERSQPPLLIPMAASYAKYTGD 203 (557)
Q Consensus 130 grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPng~------r~yy~~rSQPPl~~~mv~~~~~~t~D 203 (557)
.+|. .|.||+.|+++||+..|++|+|++.|.+|+.+ .+.|.|||.. ..||.+..-+|+++.++.+|++.|+|
T Consensus 280 ~WF~-~fGRD~lIS~lgll~~g~~elArg~L~~~a~~-~~~GkIPhe~~~~~~~~~~Y~tvD~t~~~i~~~~~y~~~t~d 357 (641)
T COG3408 280 HWFS-PFGRDTLISALGLLLVGRFELARGTLNTLARY-SEPGKIPHEILLSIPGEPYYNTVDATPLFIYLLGAYLKYTGD 357 (641)
T ss_pred hhcc-ccchHHHHHHHHHHhcCCHHHHHHHHHHHHhh-ccCCCCcchhhhcCCCcceeccCCCcHHHHHHHHHHHHHhcc
Confidence 3577 89999999999999889999999999999999 5569999973 47888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcC
Q psy3156 204 TNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETG 283 (557)
Q Consensus 204 ~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESG 283 (557)
.+|+++++|.+..+++|+.+.-+..+...|. ++ +..+...+
T Consensus 358 ~~~i~e~~~~v~~a~d~~~~~~~~~~~~~~~--~l-------------------------------------~~~~~~~t 398 (641)
T COG3408 358 TEFIRELWPSVGAALDWILKGFDFGFDTYGD--GL-------------------------------------LEGGSNQT 398 (641)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccceecCc--cc-------------------------------------ccCCCCCC
Confidence 9999999999999999998765421111111 00 11111122
Q ss_pred CCCccchhhccCCCCCCCCcccccc-cccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhcccccc
Q psy3156 284 WDFSSRWFIARDGSNRGGLKYIRTT-SIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQV 362 (557)
Q Consensus 284 wD~SsRw~~~~~g~~~~~l~~i~t~-~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~ 362 (557)
|++..+. .. ..+. ...||++|+++|.+.+.+..+|.++++.++++.|.+.|+++++.+++.||++
T Consensus 399 ------W~Ds~~~---~~---~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~~~~~~~~~~~~a~~l~~~F~~~fw~~-- 464 (641)
T COG3408 399 ------WMDSGDD---IF---AVTPRAGKPVAINALQYYALKAALRLANLLGDEEDAARLEKIARRLKESFEAKFWNP-- 464 (641)
T ss_pred ------CeecCCc---cc---cccCCCCCceeHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHhhCc--
Confidence 3322111 00 1222 5779999999999999999999999988899999999999999999999998
Q ss_pred ceEEeEEcCC-CcccccccccchHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCC-----CCCCC
Q psy3156 363 GVWLDYDIKN-KKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNS-----TQQWD 436 (557)
Q Consensus 363 g~~~D~d~~~-~~~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~s-----g~qWd 436 (557)
..|||..... +.+....+....+++++|+.++ +.+ .+++ +.+..+++ |+||+| |+.. +.+++
T Consensus 465 ~~f~dl~~~~~~~~~r~~~~~a~~l~~~gi~~~---~~~-~~~~-l~e~~llt------p~GlRT-LS~~dp~Y~p~yYH 532 (641)
T COG3408 465 TGFYDLALDDKDVPIRPNFSNAIHLLYTGIVDP---ERA-VIIR-LAEEDLLT------PWGLRT-LSPDDPRYNPMYYH 532 (641)
T ss_pred cchHhhhccCCCcccCccceecccccccccCch---HHH-HHHH-HHHHhccC------Cccccc-cCCCCCCcCCCccc
Confidence 4488887664 4555556666788999999886 333 4444 44477887 999998 7543 23333
Q ss_pred CCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHH
Q psy3156 437 YPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFA 516 (557)
Q Consensus 437 ~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~ 516 (557)
.++|||+++++++.|+.|||..+ ..|.+++++.+.+.. -|.|.|.|+...++.+. | +..++||+|++
T Consensus 533 ~GtVWP~~~gifv~g~~r~G~~~--~~~~~~~~~~~~~a~-----~~~~pE~f~g~~~~~P~--g----c~~QAWS~a~~ 599 (641)
T COG3408 533 NGTVWPHDTGIFVLGLRRYGLKD--IQALELFDGLFSSAS-----PGRIPELFDGDSPNRPK--G----CYPQAWSSAEI 599 (641)
T ss_pred CCCcccchHHHHHHHHHHcCccc--HHHHHHHHHHhhhcc-----cCCCcccccccCCCCCC--C----cchhhhhHHHH
Confidence 45599999999999999999763 278888887776532 37889999999876322 2 25569999999
Q ss_pred HH-HHHHH
Q psy3156 517 FE-LLNRY 523 (557)
Q Consensus 517 L~-ll~~~ 523 (557)
|. +++..
T Consensus 600 l~~~~~~~ 607 (641)
T COG3408 600 LRSLLQGL 607 (641)
T ss_pred HHHHHHHH
Confidence 98 77754
No 13
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=99.93 E-value=1.8e-24 Score=238.30 Aligned_cols=287 Identities=14% Similarity=0.178 Sum_probs=206.5
Q ss_pred hHHHhhhccccccccccCCCCCcccccCCCcccCC-CCCCcchhhHHHHHHHHHHhc-CCchhHHHHHHHHHHhhhhcCC
Q psy3156 95 NQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPG-GRFRELYYWDTYWIVQGILLC-DMKDSARGVIENIISLVDQFGF 172 (557)
Q Consensus 95 ~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPg-grF~e~yyWDSyfi~~GLl~s-~~~~~a~~~i~nf~~~i~~~G~ 172 (557)
+....+|.+..+.=|..++ + -....|+-| .+|+. |..||++.+.||+++ |+++.|+.+|..|+..+ +.|+
T Consensus 259 ~~~~~~L~~AadqFiv~r~---~---~~~~tiiAGypwF~~-WGRDt~Isl~Gl~l~tgr~~~A~~iL~~fa~~~-~~Gl 330 (575)
T TIGR01561 259 ESFALKLLRATDDFVVKNH---A---KDENAIIAGYHWFDD-WGRDSFISLEGLLLIDKQFDEAKEAILKFANLC-KRGL 330 (575)
T ss_pred chHHHHHHHHHhhhEEccc---C---CCCcEEEecCchhcc-chhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHh-HCCC
Confidence 4566677765554333210 0 123456666 46776 999999999999874 89999999999999999 5699
Q ss_pred CCCC-----ccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCC
Q psy3156 173 MPNG-----ARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRG 247 (557)
Q Consensus 173 IPng-----~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~ 247 (557)
|||- ...+|.++.-+|+|.++|.+|++.++|..++++++|.|+.++++++.+....+..+++ +|.
T Consensus 331 iPN~~~~~g~~p~YntvDAtLWfi~al~~Y~~~tgD~~~l~~l~p~l~~ii~~y~~G~~~~i~~d~d--GLi-------- 400 (575)
T TIGR01561 331 IPNNFIAFGGDPIYNGVDASLWAIHAIDKTFAYSQDFLFIRDVVDKVLDIIDNYCAGNDFAIGMDND--LIF-------- 400 (575)
T ss_pred CCCccCCCCCCccCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCCcEEEECCC--ccE--------
Confidence 9994 4568999999999999999999999999999999999999998877654322111110 121
Q ss_pred CCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHH
Q psy3156 248 PRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLS 327 (557)
Q Consensus 248 prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La 327 (557)
. .| ..-.||+..+| +.. ..++...||++||++|++++.++
T Consensus 401 -----------------------------~----~g--~~lTWMDa~~g---~~~--~tPR~G~~VEInALwYnAL~~~a 440 (575)
T TIGR01561 401 -----------------------------H----KG--APLTWMDAKVD---ERA--VTPRAGAACEINALWYNALKTAE 440 (575)
T ss_pred -----------------------------e----CC--CCCCCCCCCCC---Ccc--CCCCCCccHHHHHHHHHHHHHHH
Confidence 1 12 12358875544 222 23456799999999999999999
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcc----cccccccchHHH--hhccCCCChHH-HH
Q psy3156 328 EWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKP----RNYFYVSNITPL--WTLSYKFSKQY-VA 400 (557)
Q Consensus 328 ~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~----~~~~~~s~~~PL--~~g~~~~~~~~-~a 400 (557)
.|++.+|+. +..|+++|+++|++|++.||+++.|++||+.-.++.. ....-+..++.+ -.+++++ + ++
T Consensus 441 ~la~~~g~~--a~~y~~~A~~lk~~F~~~FW~~~~g~l~D~v~~d~~~~~~~d~s~RPNql~A~sL~~~ll~~---~~~~ 515 (575)
T TIGR01561 441 FLGNELGED--AESLEEKAAGVAKNFAEKFINPDGNCLFDLIHQDEAGNQVKDKAIRPNQIFAISLPFPIIDD---ESIA 515 (575)
T ss_pred HHHHHhCcc--HHHHHHHHHHHHHHHHHhcCCCCCCeeEEEEecCCCCCcccccccCCCceeHhhCCCCCCCH---HHHH
Confidence 999999974 5779999999999999999999999999975433221 111112222111 1244565 6 88
Q ss_pred HHHHHHHhccccccccCccccCCccccccCCC---------C------CCCCCCcCcchHHHHHHHH
Q psy3156 401 ERVLQYLRDNEIITKDNQVKFYGTPTSLFNST---------Q------QWDYPNAWAPLQAFIIQGL 452 (557)
Q Consensus 401 ~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg---------~------qWd~PnvWppl~~~~i~GL 452 (557)
++|++.+. +.+++ |+||+| |+++. . -.+.|.|||++...+++|.
T Consensus 516 ~~vl~~v~-~~Llt------p~GlRT-Lsp~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~ 574 (575)
T TIGR01561 516 KAILDLIE-KDLLR------PFGLKS-LSRDDPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKAR 574 (575)
T ss_pred HHHHHHHH-hhccC------Cccccc-CCCCCCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhc
Confidence 88997554 77997 999998 76432 1 2345679999999998874
No 14
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=99.88 E-value=3.7e-21 Score=223.32 Aligned_cols=344 Identities=16% Similarity=0.178 Sum_probs=228.2
Q ss_pred cccCC-CCCC----cchhhHHHHHHHHHHh-cCCchhHHHHHHHHHHhhhhcCCCCC----CccccccCCCCcCcHHHHH
Q psy3156 125 FFIPG-GRFR----ELYYWDTYWIVQGILL-CDMKDSARGVIENIISLVDQFGFMPN----GARVYYLERSQPPLLIPMA 194 (557)
Q Consensus 125 fiVPg-grF~----e~yyWDSyfi~~GLl~-s~~~~~a~~~i~nf~~~i~~~G~IPn----g~r~yy~~rSQPPl~~~mv 194 (557)
.|+-| .+|. .-|..||++.+.||++ .|+++.|+.+|..|+..+.+ |+||| |...-|.+|..+.+|.++|
T Consensus 1022 si~AGyPwF~tg~mr~WGRDTfISLrGLlL~tGR~~eAk~ii~~fa~~lr~-GLIPNll~~G~~prYNt~DA~lWfi~AI 1100 (1464)
T TIGR01531 1022 SLAAGLPHFSVGYMRCWGRDTFIALRGMLLTTGRFDEARAIILAFAGTLRH-GLIPNLLDEGINPRYNCRDAAWFWLQCI 1100 (1464)
T ss_pred eEEecCCccccCcccccchhheeecCcceeccCCHHHHHHHHHHHHHHHHc-CCCCCCCCCCCcccccCccHHHHHHHHH
Confidence 55556 3555 6899999999999765 59999999999999999955 99999 3345688999999999999
Q ss_pred HHHHHHcCC-HHH----------------------HHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCC--
Q psy3156 195 ASYAKYTGD-TNF----------------------IRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPR-- 249 (557)
Q Consensus 195 ~~~~~~t~D-~~~----------------------l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~pr-- 249 (557)
++|++.++| .++ .+.+++.|...+++..++.+. ...+.+|.
T Consensus 1101 qdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iqeIl~~h~~G~~f--------------RE~NAGp~iD 1166 (1464)
T TIGR01531 1101 QDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIYEALQKHFQGIQF--------------RERNAGPQID 1166 (1464)
T ss_pred HHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHcCCcc--------------ccccccccch
Confidence 999999988 344 345566777777665554321 11112221
Q ss_pred ----CcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCC-----CCCCCCcccccccccchhHHHHHH
Q psy3156 250 ----PESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDG-----SNRGGLKYIRTTSIIPVDLNAILQ 320 (557)
Q Consensus 250 ----pEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g-----~~~~~l~~i~t~~i~pVDLNa~ly 320 (557)
+|.+--++..- .+ ..| |.++. -.+.-.||+. .| .+.+... .+++..||++||+||
T Consensus 1167 ~~M~deGfn~~I~vD------~~-~GL---I~gGn---~~ncgTWMDk-mg~SekA~~~G~p~--TPRdG~aVEInaLwy 1230 (1464)
T TIGR01531 1167 RVMTDEGFNVTIGVD------WE-TGF---IYGGN---RFNCGTWMDK-MGESEKAGNKGIPA--TPRDGAAVEIVGLLK 1230 (1464)
T ss_pred hhhccccccceEEEc------CC-CCc---EecCC---CCCCCCCcCC-CCcccccccCCccc--CCCCCCceeHHHHHH
Confidence 11111111000 00 000 11111 1123469862 11 1223332 467899999999999
Q ss_pred HHHHHHHHHHHHc-----CChhhHHHHHHHHHHHHHHHHHhcccc-ccceEEeEEc-------------CCC------c-
Q psy3156 321 MNANYLSEWWLKF-----GNKDLSAKYKKIAYQLLEAIHEVLWNE-QVGVWLDYDI-------------KNK------K- 374 (557)
Q Consensus 321 ~~~~~La~la~~l-----G~~~~a~~~~~~A~~~k~aI~~~lWde-e~g~~~D~d~-------------~~~------~- 374 (557)
.+++.++++++.. |.......|.++|++++++|.+.||++ ..+.-||++. ..+ +
T Consensus 1231 nAL~~~~~l~~~~~~~~~g~~~~~~~~~~wa~~ik~~Fe~~F~~~~~~~~lyDv~~~~vnrrgIykD~~~s~~~~~D~ql 1310 (1464)
T TIGR01531 1231 SALRFLIELKEKGVFKRSGVETQKWSYIEWNQKIQDNFEKRFFVDESQDADYDVAKLGVNRRGIYKDSYGSTKPWTDYQL 1310 (1464)
T ss_pred HHHHHHHHHHHhcCcCcCCcccchhhHHHHHHHHHHHHhhhcCCCcccCccccccchhhccccccccccCCCCCCCCccc
Confidence 9999999999987 776556679999999999999999984 4566677653 101 1
Q ss_pred -ccccccccchHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCC---------------------C
Q psy3156 375 -PRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNS---------------------T 432 (557)
Q Consensus 375 -~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~s---------------------g 432 (557)
++..++.+...+| .++ +++.++++.. ..+++ |+|++| |+++ |
T Consensus 1311 RPN~~iA~sla~~l----~~~---~~a~~~L~~v--~~Llt------P~GlRT-LdP~D~~Y~g~Y~g~~dsrD~~t~kg 1374 (1464)
T TIGR01531 1311 RPNFAIAMTVAPEL----FVP---EKAWKALTIA--EVLLG------PLGMKT-LDPSDWNYRGYYNNGEDSDDFATAKG 1374 (1464)
T ss_pred CCCceEEEeCCccc----CCH---HHHHHHHHHH--HHhcc------CCcccc-CCCCCcCCCCccCCchhhcccccccc
Confidence 2223333322333 344 8888888877 45887 999998 7532 1
Q ss_pred CCCCCCCcCcchHHHHHHHHHhhCcH---HHHHHHHHHHHHHHHHHHhhhhhc--CcccccccccccCCCCCCccccCCC
Q psy3156 433 QQWDYPNAWAPLQAFIIQGLDYTQDK---LAKQVAYRLAEKWLFTNYMGYETS--KAMFEKYDVELIGKTGNGGEYEAQT 507 (557)
Q Consensus 433 ~qWd~PnvWppl~~~~i~GL~~yG~~---~~~~lA~~la~r~l~~~~~~~~~t--G~m~EkYd~~~~~~~g~gGey~~q~ 507 (557)
.-.++|.+|+++...+++|+.+.... .....+.+.+.+.|......+.+. |.+.|.||...+..+. | + .
T Consensus 1375 ~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g~l~El~dgdgp~~~~-g--c---~ 1448 (1464)
T TIGR01531 1375 RNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWRGLPELTNKDGEYCND-S--C---P 1448 (1464)
T ss_pred ccccCCCcCccchhHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCC-C--C---H
Confidence 13344559999999999999996532 112233345566777776666665 6899999987665332 2 2 4
Q ss_pred CCcchHHHHHHHHH
Q psy3156 508 GFGWTNGFAFELLN 521 (557)
Q Consensus 508 gFGWTngv~L~ll~ 521 (557)
.++||.|.+|+++.
T Consensus 1449 aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1449 TQAWSVACLLELLY 1462 (1464)
T ss_pred HHHHHHHHHHHHHh
Confidence 56999999999864
No 15
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.69 E-value=1e-14 Score=164.65 Aligned_cols=306 Identities=13% Similarity=0.095 Sum_probs=208.8
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCCCccccccCCCC-----------cCcHHHHHHHHH
Q psy3156 130 GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQ-----------PPLLIPMAASYA 198 (557)
Q Consensus 130 grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPng~r~yy~~rSQ-----------PPl~~~mv~~~~ 198 (557)
|.|+-.|-.|+++++.+|+..|.++.|+..++-++..|...|..|. .||..-+. -....+++..|+
T Consensus 290 ~~Y~y~W~RD~~~~a~Al~~~G~~~~a~~~l~~l~~~q~~~G~~~~---~~~~dG~~~~~~~~~Q~D~~g~~l~al~~y~ 366 (616)
T TIGR01577 290 GGYAYCWGRDASYIATALDRAGYHDRVDRFFRWAMQTQSRDGSWQQ---RYYLNGRLAPLQWGLQIDETGSILWAMDQHY 366 (616)
T ss_pred CCCceeccccHHHHHHHHHHCCCHHHHHHHHHHHHHhhCcCCCcce---EEecCCCCCCCCCCccccchhHHHHHHHHHH
Confidence 4588999999999999999999999999999999999998897652 23322111 123567788889
Q ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhh
Q psy3156 199 KYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKA 278 (557)
Q Consensus 199 ~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a 278 (557)
+.++|.+|+++++|.+++..+|-.++... ++ |.|
T Consensus 367 ~~t~d~~~~~~~~~~v~~a~~fl~~~~~~----~l--------------~~~---------------------------- 400 (616)
T TIGR01577 367 RLTNDRAFLEEIWESVQKAAQYLILFIDP----ET--------------PLP---------------------------- 400 (616)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHhccC----CC--------------CCC----------------------------
Confidence 99999999999999999999987765431 11 100
Q ss_pred hhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhcc
Q psy3156 279 GAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLW 358 (557)
Q Consensus 279 ~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lW 358 (557)
...+|-.. .| ..+-.++.+|.+++..++||+.+|+.+.++.|++.|++++++|++.+|
T Consensus 401 -------~~~lWEer-~G--------------~~~~t~a~~~aAL~~aa~lA~~lGd~~~a~~~~~~Ad~ik~~i~~~~w 458 (616)
T TIGR01577 401 -------CRDLWEER-EG--------------VFTYTASAVYGGLDAAAAVADKLGEKRLAQNWKKAAEFIKRAVEERFW 458 (616)
T ss_pred -------CCccceec-CC--------------ccCccHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhcc
Confidence 01124321 12 134558999999999999999999998899999999999999999999
Q ss_pred ccccceEEeEEcCCCcccccccccch-HHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCC
Q psy3156 359 NEQVGVWLDYDIKNKKPRNYFYVSNI-TPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDY 437 (557)
Q Consensus 359 dee~g~~~D~d~~~~~~~~~~~~s~~-~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~ 437 (557)
+++.|.|.+.-- ++......-+|.+ +|+-.|+.++.+ .+..+.++.+++ .+..| .++|+. ...+..+.+
T Consensus 459 ~~~~g~F~~~~~-~~~~~~~vDaSlL~l~~~~g~l~~~D-pr~v~Tv~~I~~-~L~~~----~~ggi~---RY~~D~y~~ 528 (616)
T TIGR01577 459 LPERQVFAKGIK-LMVLDKTIDISILGISVPFNLIAPDD-ERMVKMAEAIEK-HLTSP----IVGGIK---RYENDPYVG 528 (616)
T ss_pred CCCCCEEEEeec-CCCCCCcccHHHHhHHHhcCCCCCCC-hHHHHHHHHHHH-Hhccc----CCCeee---CCCCCCCCC
Confidence 999999987532 1112223333332 455467776622 333344555542 23321 134432 122223345
Q ss_pred CCcCcchHHHHHHHHHhhCcHHHH------HHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcc
Q psy3156 438 PNAWAPLQAFIIQGLDYTQDKLAK------QVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGW 511 (557)
Q Consensus 438 PnvWppl~~~~i~GL~~yG~~~~~------~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGW 511 (557)
+|.|...+..+++.+.+.|..... +.-.+-|+++++.+...-..+|-|.|.+|+.++...|. ...+|
T Consensus 529 g~~w~i~T~wla~~~~~~g~~~~~~~~~~~~~~~~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g~-------~Pl~w 601 (616)
T TIGR01577 529 GNPWILTTLWLSQLYIKQGRILKALNHNGADIYLQKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAWA-------VPLGW 601 (616)
T ss_pred CCcHHHHHHHHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCCCCc-------CCccc
Confidence 789999999999999988864200 00012344445555554445799999999998765543 56799
Q ss_pred hHHHHHHHHHHH
Q psy3156 512 TNGFAFELLNRY 523 (557)
Q Consensus 512 Tngv~L~ll~~~ 523 (557)
|.+.++..+..+
T Consensus 602 SHa~~i~a~~~l 613 (616)
T TIGR01577 602 SHAMFLLTVLDL 613 (616)
T ss_pred chHHHHHHHHHH
Confidence 999888766554
No 16
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.54 E-value=2.7e-13 Score=150.00 Aligned_cols=318 Identities=20% Similarity=0.239 Sum_probs=189.4
Q ss_pred HHhHHHhhhccccccccccCCCCCcccccCCCcccCC-CC-CCcchhhHHHHHHHHHHh-cCCchhHHHHHHHHHHhhhh
Q psy3156 93 DLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPG-GR-FRELYYWDTYWIVQGILL-CDMKDSARGVIENIISLVDQ 169 (557)
Q Consensus 93 ~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPg-gr-F~e~yyWDSyfi~~GLl~-s~~~~~a~~~i~nf~~~i~~ 169 (557)
.||+||..-.|.+.... . ...+=| .| =|-.|.=|+...++.... .++..+.+..|+.|...|..
T Consensus 118 ~ln~i~~~~~~T~~~n~---------~----~~~~Dcp~RdER~~w~GD~~~~~~~~~~~~~~~~l~~~~l~~~~~~q~~ 184 (509)
T PF05592_consen 118 LLNRIWEMSRRTLRSNM---------Q----DVFTDCPKRDERLGWTGDARVSALTAYYSFGDAALYRKWLRDFADSQRP 184 (509)
T ss_dssp HHHHHHHHHHHHHHHTB---------S----SSB-SBTTT-T---BHHHHHHHHHHHHCCT--HHHHHHHHHHHHGGTTT
T ss_pred HHHHHHHHHHHHHHhhC---------C----CCceECcchhhhcCCcchHHHHHHHHHHhCCcHHHHHHHHHHHHHhhcc
Confidence 47888988777554211 1 222333 24 455677799988888775 47889999999999999999
Q ss_pred cCCCCCCcccc-ccCCCCcC---cHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCC
Q psy3156 170 FGFMPNGARVY-YLERSQPP---LLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPS 245 (557)
Q Consensus 170 ~G~IPng~r~y-y~~rSQPP---l~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~ 245 (557)
.|.+|...... ......|. ++..+++.||..+||++++++++|.+++.++|+..... +|.. .+
T Consensus 185 ~G~~p~~~P~~~~~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~~~~~~~~~l~~~~~~~~-----~~~~-~~------- 251 (509)
T PF05592_consen 185 DGLLPSVAPSYGGGGFGIPDWSLAWIIIPWDYYLYTGDREFLEEYYPAMKRYLDYLERRVD-----DGLD-GL------- 251 (509)
T ss_dssp STT-SSBSS---SSGGGBHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHTTB------TSSB--C-------
T ss_pred cCCceEEecccCCCCCCCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCC-----cccc-CC-------
Confidence 99999743332 11111222 36678899999999999999999999999999876533 1110 00
Q ss_pred CCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhcc-CCCCCCCCcccccccccchhHHHHHHHHHH
Q psy3156 246 RGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIAR-DGSNRGGLKYIRTTSIIPVDLNAILQMNAN 324 (557)
Q Consensus 246 ~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~-~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~ 324 (557)
.+|.+. -|.... ++ -...+. ..-.|+++|.+++
T Consensus 252 ------------------------------------~~~~~~-DW~~~~~~~--------~~~~~~-~~~~~~~~~~~l~ 285 (509)
T PF05592_consen 252 ------------------------------------PGWGFG-DWLAPGNDG--------DGPTPG-ATITNALYYYALR 285 (509)
T ss_dssp ------------------------------------CSB--S--SS----TT-----------SCC-EEHHHHHHHHHHH
T ss_pred ------------------------------------CCCcee-ecCCccCcc--------cccchH-HHHHHHHHHHHHH
Confidence 011111 132100 00 011112 2238999999999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhccCCCChHHHHHHHH
Q psy3156 325 YLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVL 404 (557)
Q Consensus 325 ~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~ 404 (557)
.+++||+++|+.+.|+.|+++|+++|++|++.|||+++|.+- +.. -.++.+||++|++++ +++.+++.
T Consensus 286 ~~a~lA~~lg~~~~a~~y~~~a~~lk~a~~~~~~d~~~g~~~-----~~s-----q~~~alAl~~gl~p~--~~~~~~~~ 353 (509)
T PF05592_consen 286 AAAELAEALGKDEDAAEYRARAERLKAAINRHFWDPEKGGYA-----DGS-----QHANALALLFGLVPE--EERAAAAL 353 (509)
T ss_dssp HHHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHCEETTTTEEC-----TTS-----HCHHHHCHHCCHC-H--HHHTCHCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCcccCccc-----CCc-----hHHHHHHHHhchhhh--hhhHHHHH
Confidence 999999999999999999999999999999999999999221 122 257899999999986 22224444
Q ss_pred HHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHH-----HHHHHHhhh
Q psy3156 405 QYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEK-----WLFTNYMGY 479 (557)
Q Consensus 405 ~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r-----~l~~~~~~~ 479 (557)
+.|.+ .+.. ...-+.+ |. ....+++++|.++|... .|.+++.+ |..++..
T Consensus 354 ~~l~~--~~~~----~~~~~~~-----g~---------~g~~~~~~~L~~~g~~~---~a~~~~~~~~~~~w~~ml~~-- 408 (509)
T PF05592_consen 354 KRLAK--RIAA----NGYHLST-----GF---------IGSPYLLEALFRAGRAD---GAYDLLTQRDYPSWGYMLDQ-- 408 (509)
T ss_dssp CHCHH--CCHC----CCHS--T-----CC---------C-CHHHHHHHHHCCHHC---CHHHHHHHHHHHHCHHHHCT--
T ss_pred HHHHH--HHHh----cCCCcCc-----cc---------ccHHHHHHHHHHcCCHH---HHHHHHHhccccchhHHHhC--
Confidence 44432 1110 0111111 11 12377899999999873 66666543 5544443
Q ss_pred hhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHHHHH-ccc
Q psy3156 480 ETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRY-GKT 526 (557)
Q Consensus 480 ~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~-~~~ 526 (557)
...++||.|++..+. .. .....=+|.++++..|.+.. |.+
T Consensus 409 -g~tT~wE~w~~~~~~-~~-----~~S~~H~w~~~p~~~l~~~v~GI~ 449 (509)
T PF05592_consen 409 -GATTLWEYWDGDGGD-PP-----NRSLCHAWSAGPTYWLYRYVLGIR 449 (509)
T ss_dssp -T-SS--SS-STT-TC-TT------S-SSBGGG-THHHHHHHCTS-EE
T ss_pred -CCCEEEEecCccCCC-CC-----CCCCCCCcchhHHHHHHHHhhceE
Confidence 236799999974311 11 11244599888886666543 555
No 17
>PLN03005 beta-fructofuranosidase
Probab=99.29 E-value=8.1e-10 Score=117.52 Aligned_cols=340 Identities=14% Similarity=0.118 Sum_probs=199.8
Q ss_pred HhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhh-----
Q psy3156 94 LNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVD----- 168 (557)
Q Consensus 94 i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~----- 168 (557)
+.+.|..|-|.+- .-+......+.-.-+-.-.--.|++.|..|-...+++++.+|.++++|+-+...+.++.
T Consensus 85 ~~~a~~~l~~s~v---~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl~Ge~eIVrnFl~~~L~Lq~~ek~~ 161 (550)
T PLN03005 85 MAEAWEALRRSMV---FFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQGWEKRV 161 (550)
T ss_pred HHHHHHHHHhheE---EECCccceeeeecCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHHHhhhhhhh
Confidence 5577888766442 22222222222211100011459999999999999999999999999999999888777
Q ss_pred -----hcCCCCCCcc---------cc----c----cCC----CCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q psy3156 169 -----QFGFMPNGAR---------VY----Y----LER----SQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWM 222 (557)
Q Consensus 169 -----~~G~IPng~r---------~y----y----~~r----SQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~ 222 (557)
..|.||-... .+ | .+| ..-.+++..++.|.+.|+|.+|.++ |.+++-+.+.+
T Consensus 162 d~~q~g~G~mPaSfkv~~~p~~~~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~k~tgD~s~~e~--pevQrgi~lil 239 (550)
T PLN03005 162 DRFKLGEGVMPASFKVLHDPIRETDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSET--PECQKGMKLIL 239 (550)
T ss_pred hcccCCCCCcCceeeecccccCCCccccccccccccccccccchhhHHHHHHHHHHhhccchhhhhC--hHHHHHHHHHH
Confidence 4799995422 11 1 223 2235788999999999999999988 99999997774
Q ss_pred Hc---cccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCC
Q psy3156 223 KR---HMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNR 299 (557)
Q Consensus 223 ~~---R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~ 299 (557)
+- ..+ +... .|.. ..++-|.++
T Consensus 240 ~lcLa~~F--d~~p---tLlv--------------------------------------------pDgs~miDR------ 264 (550)
T PLN03005 240 SLCLAEGF--DTFP---TLLC--------------------------------------------ADGCSMIDR------ 264 (550)
T ss_pred HHhccccc--CCCc---eEec--------------------------------------------cCCcccccc------
Confidence 31 111 0001 1110 001113221
Q ss_pred CCCcccccccccchhHHHHHHHHHHHHHHHHHHcCC-hhhHHHHHHHHHHHHHHHHHhcccc------------------
Q psy3156 300 GGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGN-KDLSAKYKKIAYQLLEAIHEVLWNE------------------ 360 (557)
Q Consensus 300 ~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~-~~~a~~~~~~A~~~k~aI~~~lWde------------------ 360 (557)
.-.....|.++|+++|.+.++..++-..-++ .+....-.++-..+..-|+.++|-+
T Consensus 265 -----rMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~~~~~i~~i~~rl~~L~~h~r~yyWld~~~ln~iyr~kteey~~~ 339 (550)
T PLN03005 265 -----RMGVYGYPIEIQALFFMALRSALSMLKPDGDGREFIERIVKRLHALSFHMRNYFWLDHQNLNDIYRFKTEEYSHT 339 (550)
T ss_pred -----ccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHheecchhhhhhhhhccHhhhchh
Confidence 1234567999999999999998764322211 2223333333334445567777711
Q ss_pred ---------------------ccceEEeEEcCCC-cccccccccchHHHhhccCCCChHHHHHHHHHHHhc--ccccccc
Q psy3156 361 ---------------------QVGVWLDYDIKNK-KPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRD--NEIITKD 416 (557)
Q Consensus 361 ---------------------e~g~~~D~d~~~~-~~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~--~~~l~~~ 416 (557)
+.|-|+==++... -....++..|++..+.+++++ +|++++++.++. ..+..
T Consensus 340 a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffslGNllAILs~Lat~---~Qs~aIm~lIe~~w~~Lv~-- 414 (550)
T PLN03005 340 AVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFALGNCVSILSSLATP---DQSMAIMDLLEHRWEELVG-- 414 (550)
T ss_pred hhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhhhhHHHHHhccCCH---HHHHHHHHHHHHHHHHHhc--
Confidence 1122221111111 122456778899999999998 889999888762 11221
Q ss_pred CccccCCc--cc----------cccCCCCCCC--CCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy3156 417 NQVKFYGT--PT----------SLFNSTQQWD--YPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETS 482 (557)
Q Consensus 417 ~~~~~~Gl--pT----------sl~~sg~qWd--~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~t 482 (557)
. .|..| |. .-.+-.-.|. .+..||-+.|+.+.++.+.|..+ +|++ -+........+.
T Consensus 415 -~-MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~---lA~r----al~~ae~rl~~d 485 (550)
T PLN03005 415 -E-MPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKTGRPQ---IARR----AVDLIESRLHRD 485 (550)
T ss_pred -c-CCcceeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHcCCHH---HHHH----HHHHHHHHhhhc
Confidence 0 13222 11 0001112233 33499999999999999999984 4433 333333322333
Q ss_pred CcccccccccccCCCCCCccccCCCCCcchHHHHH
Q psy3156 483 KAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAF 517 (557)
Q Consensus 483 G~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L 517 (557)
.-.|+||..+|..-|-. ....++||++-+|
T Consensus 486 -~WpEyydGktGr~iGkq----ar~~QTWSiAG~L 515 (550)
T PLN03005 486 -CWPEYYDGKLGRYVGKQ----ARKYQTWSIAGYL 515 (550)
T ss_pred -CchhhcCCCCCccccee----ccccCchHHHHHH
Confidence 35999998877544321 1267899999765
No 18
>PLN02703 beta-fructofuranosidase
Probab=99.20 E-value=3e-09 Score=114.00 Aligned_cols=308 Identities=16% Similarity=0.121 Sum_probs=183.3
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhh----------cCCCCCCcccc------------------c
Q psy3156 130 GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQ----------FGFMPNGARVY------------------Y 181 (557)
Q Consensus 130 grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~----------~G~IPng~r~y------------------y 181 (557)
-.|++.|..|-...+++++.+|+++++|+-+...+.+|.. .|.||-...+. |
T Consensus 166 lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDf 245 (618)
T PLN02703 166 LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDF 245 (618)
T ss_pred cCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCc
Confidence 4599999999999999999999999999988888865543 79999653211 1
Q ss_pred c----CC----CCcCcHHHHHHHHHHHcCCHHHHHHHH--HHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCc
Q psy3156 182 L----ER----SQPPLLIPMAASYAKYTGDTNFIRTHL--KSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPE 251 (557)
Q Consensus 182 ~----~r----SQPPl~~~mv~~~~~~t~D~~~l~~~~--p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpE 251 (557)
. +| ..-.+++..++.|.+.|+|.+|.++.- +.+.+.+.+-...+- +. .. .|..
T Consensus 246 Ge~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~~Q~gI~liL~LcLa~~F-d~--fP---tLlV----------- 308 (618)
T PLN02703 246 GEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQTGIKMILKLCLADGF-DM--FP---TLLV----------- 308 (618)
T ss_pred CccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhhHHHHHHHHHHHHccCcC-CC--Cc---eEec-----------
Confidence 1 11 233578999999999999999998877 888888866444322 11 11 2221
Q ss_pred chhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHH
Q psy3156 252 SYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWL 331 (557)
Q Consensus 252 sy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~ 331 (557)
..++-|.+.+ -.....|.++|+++|.+.++..++-.
T Consensus 309 ---------------------------------pDgs~miDRr-----------Mgv~G~PLEiQaLfy~ALR~a~~~L~ 344 (618)
T PLN02703 309 ---------------------------------TDGSCMIDRR-----------MGIHGHPLEIQALFYSALVCAREMLT 344 (618)
T ss_pred ---------------------------------cCCCchhccc-----------cCcCCccHHHHHHHHHHHHHHHHhcC
Confidence 0011132211 12345689999999999988866322
Q ss_pred HcCC-hhhHHHHHHHHHHHHHHHHHhcc---------------------------------------ccccceEEeEEcC
Q psy3156 332 KFGN-KDLSAKYKKIAYQLLEAIHEVLW---------------------------------------NEQVGVWLDYDIK 371 (557)
Q Consensus 332 ~lG~-~~~a~~~~~~A~~~k~aI~~~lW---------------------------------------dee~g~~~D~d~~ 371 (557)
.-++ .+....-..+-..+..-|++++| -++.|-|+==++.
T Consensus 345 ~~~~~~e~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~ 424 (618)
T PLN02703 345 PEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQ 424 (618)
T ss_pred ccchHHHHHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeec
Confidence 1111 11111111111122223334444 2333333322222
Q ss_pred CCc-ccccccccchHHHhhccCCCChHHHHHHHHHHHhc--cccccccCccccCCc--cc----------cccCCCCCCC
Q psy3156 372 NKK-PRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRD--NEIITKDNQVKFYGT--PT----------SLFNSTQQWD 436 (557)
Q Consensus 372 ~~~-~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~--~~~l~~~~~~~~~Gl--pT----------sl~~sg~qWd 436 (557)
... ....++..|++..+.+++++ +|++++++.++. .++.. . .|..| |. .-.+-.-.|.
T Consensus 425 Pa~mDfRffsLGNlLAILs~Lat~---~Qs~aIm~lIe~~w~~Lvg---~-MPlkIcyPaie~~EWRi~TG~DpKN~PWS 497 (618)
T PLN02703 425 PAHMDFRFFTLGNLWSIVSSLATN---DQSHAILDLIEAKWAELVA---D-MPLKICYPAMEGEEWRIITGSDPKNTPWS 497 (618)
T ss_pred ccccccchhhhhhHHHHHhcCCCH---HHHHHHHHHHHHHHHHHhc---c-CccccccCCcCCccceeeeCcCCCCCCcc
Confidence 221 22456778899999999998 899999888764 11221 0 13322 11 0001112233
Q ss_pred --CCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHH
Q psy3156 437 --YPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNG 514 (557)
Q Consensus 437 --~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTng 514 (557)
.+-.||-+.|+.+.++.+.|..+ +|++. +........+. .-.|+||..+|..-|- .....++||++
T Consensus 498 YHNGGsWP~LlWf~~aA~iK~Gr~~---lA~ra----l~~ae~rl~~d-~WpEYyDGktGr~iGk----qar~yQTWSiA 565 (618)
T PLN02703 498 YHNGGAWPTLLWQLTVASIKMGRPE---IAEKA----VELAERRISLD-KWPEYYDTKRARFIGK----QARLYQTWSIA 565 (618)
T ss_pred ccCCCcchHHHHHHHHHHHHcCCHH---HHHHH----HHHHHHHhhhc-cChhhccCCCCcCcce----eccccCchHHH
Confidence 34499999999999999999984 44332 33332222233 3599999888754442 11257899999
Q ss_pred HHH
Q psy3156 515 FAF 517 (557)
Q Consensus 515 v~L 517 (557)
-+|
T Consensus 566 GyL 568 (618)
T PLN02703 566 GYL 568 (618)
T ss_pred HHH
Confidence 765
No 19
>PLN02973 beta-fructofuranosidase
Probab=99.19 E-value=7.5e-09 Score=110.42 Aligned_cols=335 Identities=13% Similarity=0.164 Sum_probs=196.2
Q ss_pred HhHHHhhhccccccccccCCC-CCcccccCCCcccCCCCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhh-----
Q psy3156 94 LNQIWKELGRIVKQDVRDNPQ-LYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLV----- 167 (557)
Q Consensus 94 i~~~W~~L~r~~~~~v~~~~~-~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i----- 167 (557)
+.+.|..|-|.+-. -+.. ..|+-...+. .+--.|++.|..|-...+++++.+|+++++|+-+..-+.+|
T Consensus 107 ~~~aw~~l~~s~v~---~~g~pvgtvAa~d~~--~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~TL~lq~~ekt 181 (571)
T PLN02973 107 VGEAWDALRRSMVY---FRGQPVGTIAAVDNS--EEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLRLQSWEKK 181 (571)
T ss_pred HHHHHHHHHhheEE---ECCeeeeeeeccCCc--cccccCcchhhhccHHHHHHHHHCCCHHHHHHHHHHHHhhhhhHHH
Confidence 45678777664421 1111 1333333321 13346999999999999999999999999888774444432
Q ss_pred -----hhcCCCCCCcccc-------------c----cCC----CCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Q psy3156 168 -----DQFGFMPNGARVY-------------Y----LER----SQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYW 221 (557)
Q Consensus 168 -----~~~G~IPng~r~y-------------y----~~r----SQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W 221 (557)
-..|.||-...+. | .+| ..-.+++..++.|.+.|+|.+|.+ .|.+++-+++.
T Consensus 182 ld~~q~g~G~mPaSfkv~~~p~~~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD~s~~e--~pevQrgi~li 259 (571)
T PLN02973 182 IDRFQLGEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAD--MPECQKGIRLI 259 (571)
T ss_pred HHhcccCCCCcCceeeecccccCccccccccccccccccccccchhhHHHHHHHHHHHhccchhhhh--cHHHHHHHHHH
Confidence 2479999543211 1 123 223578899999999999999887 89999998776
Q ss_pred HH----ccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCC
Q psy3156 222 MK----RHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGS 297 (557)
Q Consensus 222 ~~----~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~ 297 (557)
+. .+- +. .. .|.. ..++-|.++.
T Consensus 260 l~lcL~~~F-d~--~p---tLlV--------------------------------------------pDgs~miDrr--- 286 (571)
T PLN02973 260 LSLCLSEGF-DT--FP---TLLC--------------------------------------------ADGCCMIDRR--- 286 (571)
T ss_pred HHHhccccc-CC--Cc---eEec--------------------------------------------cCCccccccc---
Confidence 65 221 10 11 1210 0011132211
Q ss_pred CCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCC-hhhHHHHHHHHHHHHHHHHHhccc-----------------
Q psy3156 298 NRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGN-KDLSAKYKKIAYQLLEAIHEVLWN----------------- 359 (557)
Q Consensus 298 ~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~-~~~a~~~~~~A~~~k~aI~~~lWd----------------- 359 (557)
-.....|.++|+++|.+.++..++-..-++ .+....-.++-..+...|.+++|-
T Consensus 287 --------Mgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i~~i~~rl~~L~~hir~~ywld~~~ln~iyRykteey~ 358 (571)
T PLN02973 287 --------MGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYS 358 (571)
T ss_pred --------cccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHhhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcc
Confidence 223467899999999999988763322111 122222223333344455555553
Q ss_pred ----------------------cccceEEeEEcCCCc-ccccccccchHHHhhccCCCChHHHHHHHHHHHhc--ccccc
Q psy3156 360 ----------------------EQVGVWLDYDIKNKK-PRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRD--NEIIT 414 (557)
Q Consensus 360 ----------------------ee~g~~~D~d~~~~~-~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~--~~~l~ 414 (557)
++.|-|+==++.... ....++..|++..+.+++++ +|++++++.++. .++..
T Consensus 359 ~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGNllAILs~Lat~---~Qs~aIm~lIe~~w~~Lvg 435 (571)
T PLN02973 359 HTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSSLATP---EQSTAIMDLIESRWEELVG 435 (571)
T ss_pred hhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhhHHHHHhccCCH---HHHHHHHHHHHHHHHHHHh
Confidence 222333322222111 22457778899999999998 889999888764 11222
Q ss_pred ccCccccCCcccc---c-----------cCCCCCCC--CCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhh
Q psy3156 415 KDNQVKFYGTPTS---L-----------FNSTQQWD--YPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMG 478 (557)
Q Consensus 415 ~~~~~~~~GlpTs---l-----------~~sg~qWd--~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~ 478 (557)
..+++.. + .+-.-.|. .+..||-+.|+.+.++.+.|..+ +|++ -+......
T Consensus 436 ------~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~---lA~r----al~~ae~r 502 (571)
T PLN02973 436 ------EMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQ---IARR----AIEVAEAR 502 (571)
T ss_pred ------cCCcceeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHcCCHH---HHHH----HHHHHHHH
Confidence 2222221 1 01112333 34499999999999999999984 4433 33333332
Q ss_pred hhhcCcccccccccccCCCCCCccccCCCCCcchHHHHH
Q psy3156 479 YETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAF 517 (557)
Q Consensus 479 ~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L 517 (557)
..+. .-.|+||..+|..-|- .....++||++-+|
T Consensus 503 l~~d-~WpEyyDGktGr~iGk----qar~yQTWSiAG~L 536 (571)
T PLN02973 503 LHKD-HWPEYYDGKVGRYVGK----QSRKNQTWSVAGYL 536 (571)
T ss_pred hhhc-CChhhcCCCCCcCcce----eccccCchHHHHHH
Confidence 2333 3599999888754442 11257899999765
No 20
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.19 E-value=1e-10 Score=123.89 Aligned_cols=249 Identities=13% Similarity=0.157 Sum_probs=87.7
Q ss_pred CchhHHHHHHHHHHhhhhc-------------------CCCCCCcccc----------------ccCCCCcCcHHHHHHH
Q psy3156 152 MKDSARGVIENIISLVDQF-------------------GFMPNGARVY----------------YLERSQPPLLIPMAAS 196 (557)
Q Consensus 152 ~~~~a~~~i~nf~~~i~~~-------------------G~IPng~r~y----------------y~~rSQPPl~~~mv~~ 196 (557)
-+++.+.|++.|+..+.+. |.||.-.... +.-..-.|.|+++|.+
T Consensus 31 fP~Le~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~G~vphdlg~p~~~P~~~~n~y~~~~~~~~~D~~~~fVL~vyr 110 (365)
T PF04685_consen 31 FPELERSMQRDFADAILSEDNTERKILYDGKIAPRKVRGAVPHDLGSPFDDPWDRTNAYNYHDVYAWKDLNPKFVLQVYR 110 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4899999999999998765 9999732211 1123467889999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHh
Q psy3156 197 YAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSEL 276 (557)
Q Consensus 197 ~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l 276 (557)
++..|+|.+||++++|.+.+.++|.++ .+ .+.+| |..-..
T Consensus 111 ~~~~TGD~~fL~~~wp~v~~a~~~~~~-~D--~d~dG----l~e~~g--------------------------------- 150 (365)
T PF04685_consen 111 DYKWTGDRDFLKEMWPAVKKAMDYLLS-WD--RDGDG----LPENPG--------------------------------- 150 (365)
T ss_dssp ------------EHHHHHHHHHHHHHH-SB----TTS-----BEEET---------------------------------
T ss_pred cccccccchhhhhHHHHHHHHHHHHHh-hC--CCCCC----CCCCCC---------------------------------
Confidence 999999999999999999999999876 22 22233 331100
Q ss_pred hhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHh
Q psy3156 277 KAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEV 356 (557)
Q Consensus 277 ~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~ 356 (557)
..+..+|.- .......=.+++++.+++.+++||+++|+.+.+++|++.+++.++++++.
T Consensus 151 --~~D~TyD~~-------------------~~~G~say~~~L~laAL~A~~emA~~lgd~~~a~~y~~~~~~~~~~~~~~ 209 (365)
T PF04685_consen 151 --HPDQTYDDW-------------------SMYGPSAYCGGLWLAALRAAAEMAKILGDPELAAKYRELAEKAKKAFNKK 209 (365)
T ss_dssp -----SSSTT--------------------EEEEEEHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCccccccC-------------------CeeCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 011223321 11233456789999999999999999999999999999999999999999
Q ss_pred ccccccceEEe--EEcCCCcccccccccc----hHHHh---hccCCCChHHHHHHHHHHHhccccccccCccccCCcccc
Q psy3156 357 LWNEQVGVWLD--YDIKNKKPRNYFYVSN----ITPLW---TLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTS 427 (557)
Q Consensus 357 lWdee~g~~~D--~d~~~~~~~~~~~~s~----~~PL~---~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTs 427 (557)
|||.+ ||. +|.... ......... ++--. -.++++ ++++++++.+.+-.+....+ .+.|++..
T Consensus 210 LWnGe---yy~~~~d~~~~-~~~~~~aDQl~Gqw~a~~~gl~~v~~~---e~v~sAL~sI~~~N~~~~~~--~~~G~~n~ 280 (365)
T PF04685_consen 210 LWNGE---YYRQWYDSKYQ-NGDGCMADQLCGQWWARLLGLGDVLDE---EKVKSALRSIYEYNVKYFLG--GEMGAVNG 280 (365)
T ss_dssp SEETT---EE--EE---TT-S-EES-TT-SS--EEHHHHHHTT-S-H---HHHHHHHHHHHHHHEE-S-B--TTTBGGGG
T ss_pred hhCHh---heeeeeccCCC-CCCeEEeChhhHHHHHHHcCCcCCCCH---HHHHHHHHHHHHhcCeEccC--CCCcEEEe
Confidence 99987 776 542222 222111111 22222 334555 77777777776544441000 26676664
Q ss_pred ccCCC------CCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHH
Q psy3156 428 LFNST------QQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTN 475 (557)
Q Consensus 428 l~~sg------~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~ 475 (557)
..+.| .|- ..||+-+++-+...+...|.. ++|.++++...+..
T Consensus 281 ~~p~g~~~~~~~q~--~evW~G~~y~~Aa~mi~~G~~---~e~~~~~~~~~~~~ 329 (365)
T PF04685_consen 281 VWPDGKPDTSSPQS--NEVWTGVEYAVAAHMIQEGMV---EEGLEIAKGIYDRY 329 (365)
T ss_dssp S-T---------------------------------------------------
T ss_pred eecccccccccccc--ccccccccccccccccccccc---cccccccccccccc
Confidence 33322 222 249999999988888888876 36777766554443
No 21
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.18 E-value=3.7e-09 Score=118.70 Aligned_cols=315 Identities=16% Similarity=0.110 Sum_probs=201.3
Q ss_pred ccCCCcccCCCC-CCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCC-----CCCc--cccccC-----CCC
Q psy3156 120 YTPNGFFIPGGR-FRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFM-----PNGA--RVYYLE-----RSQ 186 (557)
Q Consensus 120 ~lp~pfiVPggr-F~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~I-----Png~--r~yy~~-----rSQ 186 (557)
..+-|..+.|.| |+..|..|+++++.+|+..|..+.|+..++.+...+...|.+ .|+. -..++. ++.
T Consensus 269 t~~l~~~~~g~~dY~y~W~RD~~~~~~AL~~~G~~~~a~~~f~~l~~~~~~~~~~~~~y~~~g~~~~~~w~~~~~~~~~~ 348 (612)
T COG3387 269 TTSLPELIGGTRDYRYVWPRDASYAALALLAIGYKKEALRFFEFLPDVQTPNGKLYHKYSIDGSDLAESWLPVSGYYNSF 348 (612)
T ss_pred CCCccccCCCCCCceEEccCcHHHHHHHHHHcCCHHHHHHHHHHHHHhhCCCCceeeEEecCCCccccccccccCCCCCC
Confidence 456788888888 999999999999999999999999999999999999886532 1221 001111 222
Q ss_pred cCc------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhh
Q psy3156 187 PPL------LIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEA 260 (557)
Q Consensus 187 PPl------~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~ 260 (557)
|=. ..+.+..+++..+|..+..+..-.....-.-++.. .
T Consensus 349 pv~~~~~a~~~~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------------------- 393 (612)
T COG3387 349 PVRIGNTALVQGALDVYGSIMNDIYFYAKYYAIYILPAADYLRR-M---------------------------------- 393 (612)
T ss_pred ceEEcchhhHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHH-H----------------------------------
Confidence 221 22333333444444433333311111111001110 0
Q ss_pred hhccChhHHHHHHHHhhhhhhcCCC--CccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhh
Q psy3156 261 ADLQTEDEKNFLYSELKAGAETGWD--FSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDL 338 (557)
Q Consensus 261 ~~~~~~~~~~~~y~~l~a~~ESGwD--~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~ 338 (557)
.-.+.+|+ .+.+|... + ..-.--++.+|.++...++||+..|+...
T Consensus 394 -----------------~~~~~~~~~p~~~~WEer--~-------------g~~~yt~~~~~agLd~A~~lA~~~gd~~~ 441 (612)
T COG3387 394 -----------------EKIKANLPTPDFDLWEER--G-------------GHFTYTKATVYAGLDAAADLAEEFGDKGS 441 (612)
T ss_pred -----------------HhhhcCCCCCccceeccc--C-------------CcccchHHHHHHHHHHHHHHHHHhCCcHH
Confidence 01123553 45678641 1 02345678889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHhhccCCCChHHHHHHHHHHHhccccccccCc
Q psy3156 339 SAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQ 418 (557)
Q Consensus 339 a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~ 418 (557)
|+.|+..|++++++|.+.+++++.|+|.=+- . +++.....++.+.....|+.++.+ .+.-+.++.+++ .+..
T Consensus 442 a~~~~~~ad~ik~~v~~~~~~~~~~~f~r~~-~-~~~~~~vDasll~l~~fg~i~~~D-~~~~~t~~~I~~-~L~~---- 513 (612)
T COG3387 442 AEHWRKTADELKEAVLRRGYAEDGGYFVRSL-G-RKPDDTVDASLLGLVLFGFIPPDD-PRILATVEAIER-ELLV---- 513 (612)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCeeehhc-C-CCccccccHHHhhccccCccCCCC-HHHHHHHHHHHH-HHhh----
Confidence 9999999999999999999999988775332 1 134555555555434467665522 444445555542 2222
Q ss_pred cccC-CccccccCCCCCCC---CCC-cCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccc
Q psy3156 419 VKFY-GTPTSLFNSTQQWD---YPN-AWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVEL 493 (557)
Q Consensus 419 ~~~~-GlpTsl~~sg~qWd---~Pn-vWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~ 493 (557)
++ |++= .+. +++| +++ .|+-...-.++.+.+.|.. +.|++|-+ .+...-..+|-+.|.+|..+
T Consensus 514 --~~~gi~R--Y~~-~~~d~~~~~~~~w~i~t~Wl~~~~~~~g~~---~~a~~ll~----~l~~~a~~~gll~EQv~~~~ 581 (612)
T COG3387 514 --DGGGIRR--YNN-EYDDGLGGDNGPWIITTLWLSEYYLALGRL---DEAKKLLE----WLLAFASPLGLLPEQVDDGS 581 (612)
T ss_pred --cCCcEEc--Ccc-ccccccCCCCCcceeehhHHHHHHHHccch---HHHHHHHH----HHHHhcCCCCCcchhhcCCC
Confidence 33 3321 121 4455 244 9999999999999999987 46777744 33444456799999999887
Q ss_pred cCCCCCCccccCCCCCcchHHHHHHHHHHHccccC
Q psy3156 494 IGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTIS 528 (557)
Q Consensus 494 ~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~~ 528 (557)
|...| -...+||.+.++..+..+-+.+.
T Consensus 582 G~~~g-------~~PlawSha~~I~ai~~l~~~~~ 609 (612)
T COG3387 582 GEPLG-------AFPLAWSHAEFIIAIRELEEALV 609 (612)
T ss_pred CccCC-------CCcchhhhHHHHHHHHHHHhhhh
Confidence 54443 25679999999999988765543
No 22
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=99.06 E-value=5.6e-08 Score=101.80 Aligned_cols=307 Identities=16% Similarity=0.163 Sum_probs=180.8
Q ss_pred CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhh----------hcCCCCCCcccc-----------cc----CC
Q psy3156 130 GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVD----------QFGFMPNGARVY-----------YL----ER 184 (557)
Q Consensus 130 grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~----------~~G~IPng~r~y-----------y~----~r 184 (557)
--|.+.|-.|--=.++.+|..|+++++|+-+..-+.+|. ..|.+|-...+- |. +|
T Consensus 32 lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~g~G~mPaSFkv~~~~~~e~l~aDfGe~AIgR 111 (436)
T PF12899_consen 32 LNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKPGRGVMPASFKVLHENEEETLIADFGERAIGR 111 (436)
T ss_pred ccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhccccccCCCcccceEEEecCCCCceEecCcchhhhcc
Confidence 358899999988888888999999999999888888874 247777543311 11 23
Q ss_pred CC----cCcHHHHHHHHHHHcCCHHHHHH--HHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhh
Q psy3156 185 SQ----PPLLIPMAASYAKYTGDTNFIRT--HLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYH 258 (557)
Q Consensus 185 SQ----PPl~~~mv~~~~~~t~D~~~l~~--~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~ 258 (557)
-. --+++..++.|.++|+|.+|.++ +-.-+...++-=...+- +. .. +|..=
T Consensus 112 v~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL~~~F-d~--~P---tLlvp----------------- 168 (436)
T PF12899_consen 112 VAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDLCLADGF-DM--FP---TLLVP----------------- 168 (436)
T ss_pred ccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHccccc-CC--Cc---eEEec-----------------
Confidence 22 23577888889999999887654 23333333332222111 00 00 11100
Q ss_pred hhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHc-CChh
Q psy3156 259 EAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKF-GNKD 337 (557)
Q Consensus 259 ~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~l-G~~~ 337 (557)
| .+ +|.++ ---....|.++.+++|.++++..+|-..- +..+
T Consensus 169 --------------------------D-g~-~MiDR----------rMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~~~~ 210 (436)
T PF12899_consen 169 --------------------------D-GA-CMIDR----------RMGVYGHPLEIQALFYMALRCARELLKPDEEGKD 210 (436)
T ss_pred --------------------------C-Cc-eeecc----------cccccCCcchHHHHHHHHHHHHHHhcCcccchhH
Confidence 0 00 11100 00123568999999999998887764432 1222
Q ss_pred hHHHHHHHHHHHHHHHHHhcccccc---------------------------------------ceEEeEEcCCCc-ccc
Q psy3156 338 LSAKYKKIAYQLLEAIHEVLWNEQV---------------------------------------GVWLDYDIKNKK-PRN 377 (557)
Q Consensus 338 ~a~~~~~~A~~~k~aI~~~lWdee~---------------------------------------g~~~D~d~~~~~-~~~ 377 (557)
..+.-.++...++.-|++++|-+-. |-|+=-++.... .-.
T Consensus 211 ~~~~i~~rl~~L~~h~r~~yWld~~~ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfR 290 (436)
T PF12899_consen 211 LIERIDKRLHALSFHIREYYWLDLKRLNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFR 290 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeecccccccee
Confidence 2333344445555557777774322 111111111110 112
Q ss_pred cccccchHHHhhccCCCChHHHHHHHHHHHhcc--ccccccCccccCCcccc---cc-------------C-CCCCCCCC
Q psy3156 378 YFYVSNITPLWTLSYKFSKQYVAERVLQYLRDN--EIITKDNQVKFYGTPTS---LF-------------N-STQQWDYP 438 (557)
Q Consensus 378 ~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~--~~l~~~~~~~~~GlpTs---l~-------------~-sg~qWd~P 438 (557)
.++..|++..++|++++ +|++++++.++.. ++.. +..+... +. + +.+|+.||
T Consensus 291 ff~lGNlLAiLsgLat~---~qa~~I~~lIe~~~~~L~g------~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG 361 (436)
T PF12899_consen 291 FFSLGNLLAILSGLATP---EQAEAIMDLIEERWEDLVG------PMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGG 361 (436)
T ss_pred ehhhhhHHHHHhcCCCH---HHHHHHHHHHHHHHhhhcc------ccchhhccCCCCCCCCccccCcCcCccccccccCC
Confidence 46677899999999998 9999999988654 3332 3322211 10 1 22455566
Q ss_pred CcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHH
Q psy3156 439 NAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFE 518 (557)
Q Consensus 439 nvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ 518 (557)
.||-+.|+.+.++.+.|..+ +|++... .......+. ...|+||..+|..-|..+ +..++||++.+|-
T Consensus 362 -~WP~LlW~~~aA~ik~gr~~---lA~~al~----~a~~rL~~d-ewpEyydGktGrp~Gkqa----r~~QTWSaAgyLl 428 (436)
T PF12899_consen 362 -SWPVLLWFLTAALIKMGRPE---LAERALE----AAENRLSKD-EWPEYYDGKTGRPMGKQA----RKYQTWSAAGYLL 428 (436)
T ss_pred -CcHHHHHHHHHHHHHcCCHH---HHHHHHH----HHHHhhccc-CCcccccCCCCCcccccc----cccCchHHHHHHH
Confidence 99999999999999999984 5554333 222222233 489999999876554322 3678999999874
Q ss_pred H
Q psy3156 519 L 519 (557)
Q Consensus 519 l 519 (557)
.
T Consensus 429 A 429 (436)
T PF12899_consen 429 A 429 (436)
T ss_pred H
Confidence 4
No 23
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=98.91 E-value=7.1e-07 Score=100.83 Aligned_cols=311 Identities=14% Similarity=0.062 Sum_probs=182.7
Q ss_pred CCCcccCC----CCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCCCccccccCCCCcC---------
Q psy3156 122 PNGFFIPG----GRFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPP--------- 188 (557)
Q Consensus 122 p~pfiVPg----grF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPng~r~yy~~rSQPP--------- 188 (557)
|-|..+ | +-|+-.|-.|++|++.+|+..|..+.|+..++-+...|...|+.|. .|+..-+..+
T Consensus 279 s~pe~~-g~~~n~dYryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l~~~~~~~G~~lq---~y~vdG~~~~~~iQlD~~g 354 (648)
T TIGR01535 279 PWGDGQ-ADDNTGGYHLVWPRDLYQVANAFLAAGDVDSALRSLDYLAKVQQDNGMFPQ---NSWVDGKPYWTGIQLDETA 354 (648)
T ss_pred CCCccC-CCCCCCceEEEehhhHHHHHHHHHHCCCHHHHHHHHHHHHHHhccCCCcCc---eeccCCCCCCCCccccHHH
Confidence 456666 5 3499999999999999999999999999999999999988888763 2443322111
Q ss_pred cHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhH
Q psy3156 189 LLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDE 268 (557)
Q Consensus 189 l~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~ 268 (557)
+..++++.+++. +. ..+.+.+++..+|-.++- |.
T Consensus 355 ~~i~~~~~l~~~--~~---~~~~~~vk~aadfl~~~~----------------------p~------------------- 388 (648)
T TIGR01535 355 FPILLAYRLHRY--DH---AFYDKMLKPAADFIVKNG----------------------PK------------------- 388 (648)
T ss_pred HHHHHHHHHHHc--Cc---HHHHHHHHHHHHHHHHcC----------------------CC-------------------
Confidence 122233333332 21 122333444433433221 00
Q ss_pred HHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHH
Q psy3156 269 KNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQ 348 (557)
Q Consensus 269 ~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~ 348 (557)
...-||-.+ .| ++ .=..|-++.++...++||+.+|+.+.+++|++.|++
T Consensus 389 ----------------p~~d~WEer-~g--------~~------~~T~a~v~aaL~~Aa~iA~~~g~~~~a~~w~~~Ad~ 437 (648)
T TIGR01535 389 ----------------TGQERWEEI-GG--------YS------PSTLAAEIAGLTAAADIAEQNGDAGSAQKYRETADN 437 (648)
T ss_pred ----------------CCCCccccc-CC--------cC------chhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 012256531 12 11 122233448888999999999999889999999999
Q ss_pred HHHHHHHhccccc-----cceEEeEEcCC------------C----cccccccccchHHHhhccCCCChHHHHHHHHHHH
Q psy3156 349 LLEAIHEVLWNEQ-----VGVWLDYDIKN------------K----KPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYL 407 (557)
Q Consensus 349 ~k~aI~~~lWdee-----~g~~~D~d~~~------------~----~~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L 407 (557)
+++.|.+.+|+++ .|+|.=..... + ......-+|.+.-...|+.++.+ .+..+.++.+
T Consensus 438 i~~~i~~~~~~~~g~~~~~~~f~r~~~~~~~~~~~~~~~~n~~~~~~~~~~vDaSlL~L~~~G~~~~dD-Pri~~Tl~aI 516 (648)
T TIGR01535 438 WQKLIENWTFTTNGPLGDGQYYLRIAGLGDPNADFLINIANGGGVYPEKEVLDPGFLELVRLGVKSPDD-PHILATLKEI 516 (648)
T ss_pred HHHHHHHhCcCCCcccCCCCeEEEeecCCCCccccccccccccccCCCCCccCHHHHHHHHcCCcCCCC-HHHHHHHHHH
Confidence 9999999999999 88877552211 1 11334444554333478776522 4444445555
Q ss_pred hccccccccCccccCCcccc----c--cCCCCCCC---CCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhh
Q psy3156 408 RDNEIITKDNQVKFYGTPTS----L--FNSTQQWD---YPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMG 478 (557)
Q Consensus 408 ~~~~~l~~~~~~~~~GlpTs----l--~~sg~qWd---~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~ 478 (557)
++ .+.. + +...+|+.=- . ...|.-|+ .||.||-++.-.-+-....|.. +..+|+.+...
T Consensus 517 e~-~L~~-~-~~~~g~~~RY~~Dgyg~~~~~~~~~~~~~G~~Wpi~T~~~~~y~l~~~~~---------a~~~l~~~~~~ 584 (648)
T TIGR01535 517 DS-TIKV-D-TPKGPSWYRYTHDGYGEPAKTEAYDGTGKGRLWPLLTGERGHYELAAGKD---------ATPYLKAMEKF 584 (648)
T ss_pred HH-Hhcc-C-CCCCCeEEecCCCCCCCcCCCCCccCCcCCceeehhhhHHHHHHHHcCCh---------HHHHHHHHHHh
Confidence 42 1221 0 0000111100 0 01223333 2689999887766665555542 23566666665
Q ss_pred hhhcCcccccccccccCCCCC--Ccccc-CCCCCcchHHHHHHHHHHHccc
Q psy3156 479 YETSKAMFEKYDVELIGKTGN--GGEYE-AQTGFGWTNGFAFELLNRYGKT 526 (557)
Q Consensus 479 ~~~tG~m~EkYd~~~~~~~g~--gGey~-~q~gFGWTngv~L~ll~~~~~~ 526 (557)
-..+|-|.|..+..++....+ -|+-. .-..-.||-|.++.++..+.+.
T Consensus 585 a~~~g~lpEQV~d~~~~~~~~~~~G~pt~Sa~PL~WsHA~yi~l~~s~~~g 635 (648)
T TIGR01535 585 ANEGGMIPEQVWDQTDLPSRGLFYGLPTDSASPLNWAHAEYVKLLRSNIDG 635 (648)
T ss_pred cCcCCCcCcccCCCCCCcccccccCCcCCccccchhhHHHHHHHHHHhhcC
Confidence 556688999998776321110 02221 2356799999999999977443
No 24
>KOG3625|consensus
Probab=98.65 E-value=9.7e-07 Score=98.90 Aligned_cols=334 Identities=18% Similarity=0.260 Sum_probs=195.8
Q ss_pred CcchhhHHHHHHHHHHh-cCCchhHHHHHHHHHHhhhhcCCCCC----CccccccCCCCcCcHHHHHHHHHHHcCC----
Q psy3156 133 RELYYWDTYWIVQGILL-CDMKDSARGVIENIISLVDQFGFMPN----GARVYYLERSQPPLLIPMAASYAKYTGD---- 203 (557)
Q Consensus 133 ~e~yyWDSyfi~~GLl~-s~~~~~a~~~i~nf~~~i~~~G~IPn----g~r~yy~~rSQPPl~~~mv~~~~~~t~D---- 203 (557)
-.-|..|+++.++|.+. .|+++-||.+|..|+..+.. |.||| |.-.-|..|..--++-++|..|.+..++
T Consensus 1080 mRcWGRDtFIaLrG~ll~TGRy~EAr~iIlaFa~tlrH-GLIPNLLd~G~~~RyNcRDA~W~wl~~Iq~Yve~vPnG~~I 1158 (1521)
T KOG3625|consen 1080 MRCWGRDTFIALRGILLITGRYVEARNIILAFAGTLRH-GLIPNLLDEGIYARYNCRDAVWWWLQCIQDYVEMVPNGLDI 1158 (1521)
T ss_pred hhhcccceeeecccceEeecchHHHHHHHHHHHHHhhc-cccchhhhccccccccchHHHHHHHHHHHHHHHhCCChhhh
Confidence 35688999999999876 59999999999999999965 99999 4455688888888999999999876543
Q ss_pred -----------------------HHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhh
Q psy3156 204 -----------------------TNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEA 260 (557)
Q Consensus 204 -----------------------~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~ 260 (557)
.-..+-++.+|.+.++ + ..|...+.+|....-..|-...
T Consensus 1159 Lkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~q----G--------------iqfRErnAGpqiD~~M~DeGFn 1220 (1521)
T KOG3625|consen 1159 LKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQ----G--------------IQFRERNAGPQIDRNMKDEGFN 1220 (1521)
T ss_pred hhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhc----c--------------ccchhccCCcccchhhhccCcc
Confidence 1112223344444331 1 1122222223211111111000
Q ss_pred hhccChhHHHHHHHHhhhhhhcCCC------CccchhhccCCC-----CCCCCcccccccccchhHHHHHHHHHHHHHHH
Q psy3156 261 ADLQTEDEKNFLYSELKAGAETGWD------FSSRWFIARDGS-----NRGGLKYIRTTSIIPVDLNAILQMNANYLSEW 329 (557)
Q Consensus 261 ~~~~~~~~~~~~y~~l~a~~ESGwD------~SsRw~~~~~g~-----~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~l 329 (557)
.. +.--.|+|.= +...||+. .|. |.+... .+++...|+|+.+.|.+.+.|-++
T Consensus 1221 v~-------------~gV~~~TGfv~GGn~~NCGTWMDK-MGeSerAgnkG~Pa--TPRDGsAVEi~GL~~salrfl~el 1284 (1521)
T KOG3625|consen 1221 VT-------------AGVDEETGFVYGGNRFNCGTWMDK-MGESERAGNKGIPA--TPRDGSAVEIVGLSKSALRFLLEL 1284 (1521)
T ss_pred ee-------------eccccccceeecCCccccchhhhh-cccchhccCCCCCC--CCCCCceeehhhhHHHHHHHHHHH
Confidence 00 0001222221 23468753 331 233333 356788999999999999999999
Q ss_pred HHHc-----C----ChhhH--HHHHHHHHHHHHHHHHhcccccc---------------ceEEeEEcCCC-----ccccc
Q psy3156 330 WLKF-----G----NKDLS--AKYKKIAYQLLEAIHEVLWNEQV---------------GVWLDYDIKNK-----KPRNY 378 (557)
Q Consensus 330 a~~l-----G----~~~~a--~~~~~~A~~~k~aI~~~lWdee~---------------g~~~D~d~~~~-----~~~~~ 378 (557)
.+.- | +..++ -.|.++++++++.+.++|+-.++ |.|.|---.+. +.+..
T Consensus 1285 kek~ifpy~~Ve~k~~g~~~k~s~~eW~qkiqdNFeK~ffV~ed~s~~~~~~~~~vnkr~IykDsygat~~~tDyQLR~N 1364 (1521)
T KOG3625|consen 1285 KEKNIFPYHGVEVKRHGKAIKWSYDEWNQKIQDNFEKLFFVSEDPSDLNEKHPNLVNKRGIYKDSYGATSPWTDYQLRPN 1364 (1521)
T ss_pred HhcCCccccceEEecccccceecHHHHHHHHHhhhhheecccCCcchhhhhcccccchhheecccccCCCCccceeccCC
Confidence 9861 1 11122 24899999999999999885443 33444211111 22344
Q ss_pred ccccc-hHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccccccC---------------------CCCCCC
Q psy3156 379 FYVSN-ITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFN---------------------STQQWD 436 (557)
Q Consensus 379 ~~~s~-~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~---------------------sg~qWd 436 (557)
|+.+. ..|=+ .++ +.|-++++..+ +-+++ |-|+.| |.+ .|..++
T Consensus 1365 F~IamtVAPeL---~~p---e~A~kAle~Ae-kvLlG------PlGMkT-lDP~D~nYr~yYdN~~Ds~d~~takG~NYH 1430 (1521)
T KOG3625|consen 1365 FTIAMTVAPEL---FTP---EKAWKALEIAE-KVLLG------PLGMKT-LDPDDWNYRGYYDNALDSDDYNTAKGFNYH 1430 (1521)
T ss_pred ceeEEEechhh---cCh---HHHHHHHHHHH-HHhcC------cccccc-cChhhcccccccCCCccccchhhhcccccc
Confidence 44443 33322 233 67777777554 34665 888887 432 122333
Q ss_pred CCCcCcchHHHHHHHHHhhCcHH-HHHHHHHHHHHH--HHHHHhhhhhc--CcccccccccccCCCCCCccccCC--CCC
Q psy3156 437 YPNAWAPLQAFIIQGLDYTQDKL-AKQVAYRLAEKW--LFTNYMGYETS--KAMFEKYDVELIGKTGNGGEYEAQ--TGF 509 (557)
Q Consensus 437 ~PnvWppl~~~~i~GL~~yG~~~-~~~lA~~la~r~--l~~~~~~~~~t--G~m~EkYd~~~~~~~g~gGey~~q--~gF 509 (557)
++.-|.+.-..++++-...+..- ....+..|++-| |...++...++ ..+.|.=|.. |||-.+ .-+
T Consensus 1431 QGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~l~~S~WrgLpELTN~n--------geyC~dSc~tQ 1502 (1521)
T KOG3625|consen 1431 QGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKHLERSPWRGLPELTNEN--------GEYCPDSCETQ 1502 (1521)
T ss_pred CCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhccccCchhhccCC--------cCcccccchHh
Confidence 34499999999999988775410 012455555543 23334433333 4577775532 344332 446
Q ss_pred cchHHHHHHHHHHH
Q psy3156 510 GWTNGFAFELLNRY 523 (557)
Q Consensus 510 GWTngv~L~ll~~~ 523 (557)
+||.|.+|+.+-..
T Consensus 1503 AWSvacile~~ydL 1516 (1521)
T KOG3625|consen 1503 AWSVACILETLYDL 1516 (1521)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887643
No 25
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=98.48 E-value=2.1e-05 Score=85.02 Aligned_cols=258 Identities=12% Similarity=0.129 Sum_probs=160.2
Q ss_pred HHHHHhcCCchhHHHHHHHHHHhhh-hc------CC------------CCCCc--------cccccCCCCcC--------
Q psy3156 144 VQGILLCDMKDSARGVIENIISLVD-QF------GF------------MPNGA--------RVYYLERSQPP-------- 188 (557)
Q Consensus 144 ~~GLl~s~~~~~a~~~i~nf~~~i~-~~------G~------------IPng~--------r~yy~~rSQPP-------- 188 (557)
..||+.- -+++++.+++-|+..|. ++ |+ +|+-- ++-| +-+|||
T Consensus 368 sfgllll-fPeLek~~~~~f~~~i~~eD~~~~v~gy~~~~~~~k~~~~tphDLg~~ehs~e~~iy-~t~~d~~~wkDlgp 445 (721)
T COG4354 368 SFGLLLL-FPELEKSVMRAFARAIPKEDTEYRVIGYAFPEAERKKDPATPHDLGPNEHSIEKPIY-GTYQDPNLWKDLGP 445 (721)
T ss_pred CchHHHH-hHHHHHHHHHHHHHhccccCCceeeeeeccchhhccCCCCCCcccCccccchhcccc-cccCCchhhhhcCC
Confidence 4566643 49999999999999986 33 55 66532 1222 245677
Q ss_pred cHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhH
Q psy3156 189 LLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDE 268 (557)
Q Consensus 189 l~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~ 268 (557)
=|.++|.+++.-|+|.+||++++|.+++.++|-++-+. +.+| |. |
T Consensus 446 ~fVLlvYrdf~~T~D~eFL~e~y~~iv~~iD~~~~~d~---d~Dg----iP-----------~----------------- 490 (721)
T COG4354 446 DFVLLVYRDFKFTNDREFLKEVYPVIVEAIDWLKRFDQ---DNDG----IP-----------E----------------- 490 (721)
T ss_pred cEEeeehhhhhhcccHHHHHHHHHHHHHHHHHHHhhcc---cCCC----CC-----------c-----------------
Confidence 37889999999999999999999999999998765432 3344 22 0
Q ss_pred HHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCCh-----------h
Q psy3156 269 KNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNK-----------D 337 (557)
Q Consensus 269 ~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~-----------~ 337 (557)
.+-++|++. ++ ..+ ....-=.-+++..+...+..|++.+++. .
T Consensus 491 -----------~~g~~d~~f--Da-------~~i------~G~ssy~~sl~iaal~A~l~is~~l~~~~~~~a~~e~~~~ 544 (721)
T COG4354 491 -----------NSGAMDNTF--DA-------TRI------QGHSSYCGSLFIAALIAALEISKYLLDNAQLEALNEASKN 544 (721)
T ss_pred -----------ccCCccccc--cc-------cee------echhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHH
Confidence 012455541 11 111 1122233455555566666667766654 1
Q ss_pred hHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccc----hHHHhhccCCCChHHHHHHHHHHHhccccc
Q psy3156 338 LSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSN----ITPLWTLSYKFSKQYVAERVLQYLRDNEII 413 (557)
Q Consensus 338 ~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~----~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l 413 (557)
....|...-+..++++|++|||.+ ||-.+ ++..+.++-++. |+.=+.|..+--+.+.++++++.+.+-++-
T Consensus 545 ~~~~y~~~L~~~~e~~~~~LwNGk---Yy~lw--s~~~~~s~lAsQL~Gqfy~~LLgLpdivdhd~~ksal~sIy~lnf~ 619 (721)
T COG4354 545 YVDFYNTWLKEAREAFNKYLWNGK---YYILW--SNSGNDSVLASQLCGQFYATLLGLPDIVDHDKIKSALESIYDLNFN 619 (721)
T ss_pred HHHHHHHHHHHHHHHHHHhccCce---eEecc--cccCchhhhHHHHHhHHHHHHcCCCcccchHHHHHHHHHHHhhccc
Confidence 234577778888999999999944 76444 444444444433 444445543223347777888777653333
Q ss_pred cccCccccCCccccccCCCCCC-----CCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHh
Q psy3156 414 TKDNQVKFYGTPTSLFNSTQQW-----DYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYM 477 (557)
Q Consensus 414 ~~~~~~~~~GlpTsl~~sg~qW-----d~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~ 477 (557)
. .+++.+-++.+.|.-= .--.+||-+++-+.-=|-.-|.. +++.+++++..+.+..
T Consensus 620 ~-----~~~~~~n~v~~dgsp~n~~svq~~s~W~gi~F~laa~m~~~Gm~---de~~~~~e~~w~~l~~ 680 (721)
T COG4354 620 A-----SEYCAANGVRPDGSPVNPLSVQPLSVWPGINFALAAHMIQMGMK---DEGFELAENVWNQLKN 680 (721)
T ss_pred c-----ccccccCccCCCCCcCCcccccccccccchHHHHHHHHHHhcch---hhhhHHHHHHHHHHHh
Confidence 2 4666665433222100 01148999998888888888887 5899999987776553
No 26
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=98.08 E-value=0.00027 Score=75.43 Aligned_cols=342 Identities=20% Similarity=0.241 Sum_probs=171.6
Q ss_pred CCCcccCCCCCCcchhhHHHHHHHHHHhc--C---CchhHHHHHHHHHHhhhh------------cCCCCCCccccccCC
Q psy3156 122 PNGFFIPGGRFRELYYWDTYWIVQGILLC--D---MKDSARGVIENIISLVDQ------------FGFMPNGARVYYLER 184 (557)
Q Consensus 122 p~pfiVPggrF~e~yyWDSyfi~~GLl~s--~---~~~~a~~~i~nf~~~i~~------------~G~IPng~r~yy~~r 184 (557)
+-.|||=|. =+-||..||...+.-.+.. . ...+.+|.|..=+.+|.. -|.-||++...-...
T Consensus 32 ~~tFViTGD-IpAmWLRDS~~Q~~pYl~l~~~d~~l~~li~G~I~rQa~~I~~dPYaNAF~~~~~s~~~~~~~~~~~~D~ 110 (424)
T PF06824_consen 32 PDTFVITGD-IPAMWLRDSAAQLRPYLPLAKEDPSLARLIRGVINRQARYILIDPYANAFNPPPESGIPPNGNGHWQSDT 110 (424)
T ss_dssp SEEEE-SBS-SSSEEHHHHHHHCGGGGGGGCC-HHHHHHHHHHHHHHHHHHHH-TT-SEEESS-----TSS-TSGCCGSB
T ss_pred CCeEEEecC-chhhhccccHhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcchhhcccCCcccccccccccCCCCCCc
Confidence 346777765 5889999999988776542 2 244566777655555532 133344443333444
Q ss_pred CCcC----c-------------HHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHHHccccccccCCce-eeeEEeeCCC
Q psy3156 185 SQPP----L-------------LIPMAASYAKYTGDTNFIRT-HLKSLTNEFEYWMKRHMVTVEKNGKY-YTMARYYAPS 245 (557)
Q Consensus 185 SQPP----l-------------~~~mv~~~~~~t~D~~~l~~-~~p~L~ke~~~W~~~R~~~~~~~G~~-~~L~rY~~~~ 245 (557)
++|+ + +..+.+.||+.|+|.+++.+ ...++++.++-|....+-..+.+|.. ..-++|.
T Consensus 111 ~~~~~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~~~~A~~~il~~~~~eq~~t~~~~~~~~~s~Y~F~--- 187 (424)
T PF06824_consen 111 TEMPYDPPWVWERKYELDSLCYFLQLAYQYWKATGDTSFFDEDWLRAVRLILDTWRTEQRPTYDEDHEGLPSPYRFQ--- 187 (424)
T ss_dssp S------TTEEE----HHHHHHHHHHHHHHHHHH--GTTSSHHHHHHHHHHHHHHHHTTG------SSSCS-S---B---
T ss_pred cCCCcCCCceeeecchhhhhhHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHhhhccccccCCCcceee---
Confidence 5544 2 66788899999999887643 67788888888876654222233310 0111111
Q ss_pred CCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHH
Q psy3156 246 RGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANY 325 (557)
Q Consensus 246 ~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~ 325 (557)
|+-..-.|........+ -.+..|+=-| .|...|. .|....-|=-|.++...+..
T Consensus 188 ---R~~~~~tdtl~~~G~G~------------pv~~tGli~S--~FRPSDD---------a~~y~yliPsNm~a~v~L~~ 241 (424)
T PF06824_consen 188 ---RPTCRPTDTLPNDGRGN------------PVAYTGLIWS--GFRPSDD---------ACIYPYLIPSNMFAVVALEY 241 (424)
T ss_dssp ---ESBSSGGGS-HHHHT-S----------------SSS-B---SB-TTSS---------B-SSSEEHHHHHHHHHHHHH
T ss_pred ---ccCCCCCccccCCCcCC------------cCCCCCceec--CcCCCCc---------chhcCcCChHHHHHHHHHHH
Confidence 11001111111000000 0112444322 1110011 23333445679999999999
Q ss_pred HHHHHHHcCChh---hHHHHHHHHHHHHHHHHHhccc--cccceEEeEEcCCCccc----ccccccc-hHHHhhccCCCC
Q psy3156 326 LSEWWLKFGNKD---LSAKYKKIAYQLLEAIHEVLWN--EQVGVWLDYDIKNKKPR----NYFYVSN-ITPLWTLSYKFS 395 (557)
Q Consensus 326 La~la~~lG~~~---~a~~~~~~A~~~k~aI~~~lWd--ee~g~~~D~d~~~~~~~----~~~~~s~-~~PL~~g~~~~~ 395 (557)
|++|.+.++..+ .|++.+++|++++++|.++.=- ++-|.-|.|-++.-... ..--+|. -+|+ .|..+.
T Consensus 242 laei~~~~~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G~~~~mDDANvPSLLSlPy-lGf~~~- 319 (424)
T PF06824_consen 242 LAEILRALGWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFGNHLLMDDANVPSLLSLPY-LGFCSK- 319 (424)
T ss_dssp HHHHHHHTT-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS-EE----SSSS-STTHHH-HTSS-T-
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCCCccccCCCCCchHhhhhh-cCCCCC-
Confidence 999999887554 7889999999999999987663 46667777766432111 1112444 4675 454443
Q ss_pred hHHHHHHHHHHHhccccccccCcc-ccCCccccc--cCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy3156 396 KQYVAERVLQYLRDNEIITKDNQV-KFYGTPTSL--FNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWL 472 (557)
Q Consensus 396 ~~~~a~~v~~~L~~~~~l~~~~~~-~~~GlpTsl--~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l 472 (557)
....-++..+.+.++. - ++. +.|...+.+ -+++. +++|| ..++++||-.-... +..++ |
T Consensus 320 ~DpvYqnTR~~iLS~~-~---NPyy~~G~~~~GiGsPHt~~----~~iWP--msl~~~~lTs~d~~----Ei~~~----L 381 (424)
T PF06824_consen 320 DDPVYQNTRRFILSPE-G---NPYYFSGKAASGIGSPHTPP----GYIWP--MSLAMQGLTSDDDE----EIREC----L 381 (424)
T ss_dssp T-HHHHHHHHHHTSTT-----STTEEEESSEEEE--TTT-T----TEEEH--HHHHHHHHT-S-HH----HHHHH----H
T ss_pred CcHHHHHHHHHHhCCC-C---CCccccCCCcCCCCCCCCCC----CCccH--HHHHHHHhcCCCHH----HHHHH----H
Confidence 2355666666665432 0 110 122211111 12221 34564 57788888553332 22222 2
Q ss_pred HHHHhhhhhcCcccccccccccCCCCCCccccCCCCCcchHHHHHHHH
Q psy3156 473 FTNYMGYETSKAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELL 520 (557)
Q Consensus 473 ~~~~~~~~~tG~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll 520 (557)
++..+.=..+|.|+|-+|+.++.. |.. .-|+|.|+.+-.++
T Consensus 382 ~~L~~t~~gtGlmHES~d~~~~~~------~TR-~WFaWaNslF~eli 422 (424)
T PF06824_consen 382 RMLKRTTAGTGLMHESFDVDDPSK------FTR-PWFAWANSLFGELI 422 (424)
T ss_dssp HHHHHTSTTSSS--SEEETTEEEE------EE--S-BHHHHHHHHHHH
T ss_pred HHHHhccCCCCceeccccCCCCcc------cCc-HHHHHHHHHHHHHh
Confidence 233333345799999999998743 222 67999999887665
No 27
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=97.48 E-value=0.0023 Score=73.59 Aligned_cols=303 Identities=18% Similarity=0.197 Sum_probs=184.2
Q ss_pred HHHHhHHHhhhccccccccccCCCC--Cccc------------ccC-CCcccCCC---CCCcchhhHHHHHHHHHHhcCC
Q psy3156 91 ALDLNQIWKELGRIVKQDVRDNPQL--YSLI------------YTP-NGFFIPGG---RFRELYYWDTYWIVQGILLCDM 152 (557)
Q Consensus 91 ~~~i~~~W~~L~r~~~~~v~~~~~~--~sli------------~lp-~pfiVPgg---rF~e~yyWDSyfi~~GLl~s~~ 152 (557)
-..+...|+.++-++. |. .|+. ..++ -.| +.|-.++| .|| |+.==.+++++. +
T Consensus 558 l~~~ra~w~~f~~~~q--v~-Tpde~lN~mvN~W~~yQal~c~~~sR~a~yQ~sG~A~GfR-----D~~Qd~l~f~~~-~ 628 (1056)
T COG3459 558 LAEIRAYWDDFLGQFQ--VE-TPDEKLNHMVNHWLPYQALTCRIWSRHAFYQESGAAFGFR-----DQLQDTLEFLLA-R 628 (1056)
T ss_pred HHHHHHHHHhhheEEE--ec-CccHHHHHHHHHHhhhhhheeEecccchhhccccceeccc-----cccccchhhhhc-C
Confidence 3457888998887665 22 3331 1111 112 56666666 233 443333444443 5
Q ss_pred chhHHHHHHHHHHhhhhcCCCCC--------C--ccccccCCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q psy3156 153 KDSARGVIENIISLVDQFGFMPN--------G--ARVYYLERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLTNEFEYWM 222 (557)
Q Consensus 153 ~~~a~~~i~nf~~~i~~~G~IPn--------g--~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ke~~~W~ 222 (557)
+++||..|.+.+..|=..|-+|+ | .|.-. -.-+-+++.++..|.+.|||.++|.+.+|-+...-.
T Consensus 629 p~~aR~qIl~~as~Qf~eGd~~hWf~p~t~ag~qir~~~--sDdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l--- 703 (1056)
T COG3459 629 PALARKQILDAASRQFVEGDVQHWFLPDTYAGVQIRTSI--SDDVVWLLKAIADYLKETGDAAILDEVIPFIDGPAL--- 703 (1056)
T ss_pred HHHHHHHHHHHHhhcccCCCccccccccccccchhhccc--CCceeeeHHHHHHHHHhcCcHhhhhccccccCCCcc---
Confidence 99999999999998876688885 1 12111 123667889999999999999999999886644310
Q ss_pred HccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCc--cchhhccCCCCCC
Q psy3156 223 KRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFS--SRWFIARDGSNRG 300 (557)
Q Consensus 223 ~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~S--sRw~~~~~g~~~~ 300 (557)
.. + .+++..|. |-...+ +...++.-...|.--. ..|. ||
T Consensus 704 --~~--~--s~e~~TLy---------------EH~~rA-----------ld~av~r~g~~glpli~gGDWN---D~---- 744 (1056)
T COG3459 704 --PE--F--SKEQATLY---------------EHCARA-----------LDLAVARLGPHGLPLILGGDWN---DG---- 744 (1056)
T ss_pred --cc--c--cccchhHH---------------HHHHHH-----------HHHHHHhcCCCCcccccCCccc---cc----
Confidence 01 0 01000111 100000 1001111111122111 1232 12
Q ss_pred CCcc-cccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCC-------
Q psy3156 301 GLKY-IRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKN------- 372 (557)
Q Consensus 301 ~l~~-i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~------- 372 (557)
|.. ........|=|-=+++...+....+++.+|+.+++..|.+.++.+++++...-|| |-||=+...+
T Consensus 745 -ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r~d~~r~~~~~~~~ea~~~~~~~~~wD---g~wy~r~~~d~g~~lgs 820 (1056)
T COG3459 745 -LNLVGNGGKGESVWLGWFLALTLQTFKELAKARGDEARADTWAKHVEALREALETNGWD---GEWYRRGYGDDGTPLGS 820 (1056)
T ss_pred -ccccccCCccceeehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhcCCC---cceEEeccccCCCcccC
Confidence 111 1223345677888999999999999999999999999999999999999999999 4465443322
Q ss_pred --CcccccccccchHHHhhccCCCChHHHHHHHHHHHhccccccccCccccCCccc-------------c-------ccC
Q psy3156 373 --KKPRNYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDNEIITKDNQVKFYGTPT-------------S-------LFN 430 (557)
Q Consensus 373 --~~~~~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpT-------------s-------l~~ 430 (557)
.+-.++.+.+.-+-++.|..++ +++++.++.+. +.|+. |.||+- - ..+
T Consensus 821 ~e~~E~qI~~i~qs~sVlSg~gd~---~ra~kaMd~v~-k~L~~------pdgvrL~tppf~~~~~~~gyiK~y~pgvRE 890 (1056)
T COG3459 821 PEDEECQIDSIPQSWSVLSGEGDK---ERAEKAMDSVM-KYLVD------PDGVRLFTPPFSYTKGDPGYIKRYPPGVRE 890 (1056)
T ss_pred CCCcccceeeeccchhhhhCCCCh---HHHHHHHHHHH-HhccC------ccccEecCCcccccCCCCCeeecCCccccc
Confidence 2334677778888899999988 77877777766 34554 555431 0 112
Q ss_pred CCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy3156 431 STQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAE 469 (557)
Q Consensus 431 sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~ 469 (557)
.|.|+--++.| +|.+|.+-|.. +.|-++-.
T Consensus 891 nGgQYtHa~~w------~i~Alak~G~a---~eAw~~f~ 920 (1056)
T COG3459 891 NGGQYTHAATW------VILALAKMGRA---DEAWELFD 920 (1056)
T ss_pred ccceeecccHH------HHHHHHhhccH---HHHHHHHH
Confidence 35566656655 78899999985 36666544
No 28
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=96.94 E-value=0.11 Score=56.97 Aligned_cols=188 Identities=12% Similarity=0.137 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH------HHhccccccceEEeEEcC---CC----ccccccccc
Q psy3156 316 NAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAI------HEVLWNEQVGVWLDYDIK---NK----KPRNYFYVS 382 (557)
Q Consensus 316 Na~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI------~~~lWdee~g~~~D~d~~---~~----~~~~~~~~s 382 (557)
.+.++.++...+++++.+|+...++.|++.|+++++.| .+-+|+ +.+.|.-.... +. ......-++
T Consensus 187 ~~~~~~AL~~a~~~a~~~g~~~~~~~~~~~a~~i~~~l~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lD~s 265 (448)
T PF00723_consen 187 SAMQWAALLRAANLAELFGDPGDAERWRETADEIRERLEGWYGLERGFWP-EFGYFIRIYGSFSGNSEQVQGYRSGLDAS 265 (448)
T ss_dssp HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHEESGGGBT-TSSBESEESSSEETTTCCEEEGSGS-BTH
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhhhhccccccccC-CCCeEEEecCCccccchhhhcchhhHHHH
Confidence 34567888999999999999999999999999999999 234565 44555433221 00 012333334
Q ss_pred c-hHHHhhccCCCCh---------HHHHHHHHHHHhccccccccCccccCCcccc-----c-cCCCCCCC-----CCCcC
Q psy3156 383 N-ITPLWTLSYKFSK---------QYVAERVLQYLRDNEIITKDNQVKFYGTPTS-----L-FNSTQQWD-----YPNAW 441 (557)
Q Consensus 383 ~-~~PL~~g~~~~~~---------~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTs-----l-~~sg~qWd-----~PnvW 441 (557)
. +.|++.- .++.+ +....+.+..+.+. +.. .+.|... + ..++...+ .+|-|
T Consensus 266 lll~~~~~~-~~~~d~~~~~~~p~sp~~~~T~~~i~~~-l~~------~~~in~g~~~~~~~RY~~D~y~~~~~~~G~pw 337 (448)
T PF00723_consen 266 LLLLPLFGF-VPPDDVDDERFQPHSPRVLNTLKAIEEE-LRV------DYPINPGDIDPGIGRYPEDVYDDGLGSEGNPW 337 (448)
T ss_dssp HHHHHHTTS-STTT-S-TTTTTTTSHHHHHHHHHHHHC-TTT------TEGGGTT-STTSEBSCTT--GGSSSBTGS-CB
T ss_pred HHHHHHccC-CCcccccccccccccHHHHHHHHHHHHH-HHH------hcCCCccccCccceecccccccCccCCCCccc
Confidence 4 4666543 33311 03344444445432 222 3333221 1 11222222 35677
Q ss_pred cchHHHHHHHHHh-----hCcH-------H----HHHHH-----------------------HHHHHHHHHHHHhhhhhc
Q psy3156 442 APLQAFIIQGLDY-----TQDK-------L----AKQVA-----------------------YRLAEKWLFTNYMGYETS 482 (557)
Q Consensus 442 ppl~~~~i~GL~~-----yG~~-------~----~~~lA-----------------------~~la~r~l~~~~~~~~~t 482 (557)
---+..+++-|.+ .|.. . -+++. .+++..+++.+.. -...
T Consensus 338 ~l~T~w~ae~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~k~~~~g~~~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~ 416 (448)
T PF00723_consen 338 FLCTFWAAEALYAEAYRRAGRGRDWPIVREARGFFEKFVSSKQITVGIPYNSEDFISLPKALFEYADSFLRVVRE-ANRN 416 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTEBEEECTTTHHHHHHHTTTGSSESEEEETSHHHHHHHHHHHHHHHHHHHHHHH-S-TT
T ss_pred eeeechhHHHHHHHHHHHHhcCCcccchHHHHHHHHHHhcccccccccccCchhhhhcccchHHHHHHHHHHHhc-CCcC
Confidence 5555553433332 2110 0 00111 2366667776666 5677
Q ss_pred CcccccccccccCCCCCCccccCCCCCcchHHHHHHHH
Q psy3156 483 KAMFEKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELL 520 (557)
Q Consensus 483 G~m~EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll 520 (557)
|.|.|.||..+|...|. ..-.||-+.+|.+.
T Consensus 417 g~lsEq~~~~~G~~~ga-------~pltwS~~~~l~~~ 447 (448)
T PF00723_consen 417 GLLSEQFNRYTGFMQGA-------RPLTWSYASFLRAG 447 (448)
T ss_dssp S---SEE-TTT--EESS-------SS-HHHHHHHHHHH
T ss_pred cEeeeeeecccCCcCCC-------CchhhhhhhhHhhc
Confidence 99999999988764443 56799999888763
No 29
>KOG2119|consensus
Probab=96.94 E-value=0.022 Score=63.73 Aligned_cols=141 Identities=12% Similarity=0.100 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccc---cchHHH-h
Q psy3156 313 VDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYV---SNITPL-W 388 (557)
Q Consensus 313 VDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~---s~~~PL-~ 388 (557)
.=--++|..+++.++.||+++|+++.+..|.++-++-|++..+.||| |.||.||......+...-+ ++.+=| -
T Consensus 624 AYCGgLWlAALqa~~amA~~~g~~~~~~~f~~klekak~~ye~kLWN---GsYfnyD~s~s~~s~sImaDQlaGqWy~~a 700 (879)
T KOG2119|consen 624 AYCGGLWLAALQAASAMARQIGDPNTQDYFNNKLEKAKDVYEKKLWN---GSYFNYDESSSGSSSSIMADQLAGQWYARA 700 (879)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHhhcC---CceeccccCCCCcchhhHHHhHhhHHHHHh
Confidence 34457899999999999999999999999999999999999999999 7799998765533333222 121111 1
Q ss_pred hc---cCCCChHHHHHHHHHHHhccccccccCccccCC--------ccccc-cCCCCCCCCCCcCcchHHHHHHHHHhhC
Q psy3156 389 TL---SYKFSKQYVAERVLQYLRDNEIITKDNQVKFYG--------TPTSL-FNSTQQWDYPNAWAPLQAFIIQGLDYTQ 456 (557)
Q Consensus 389 ~g---~~~~~~~~~a~~v~~~L~~~~~l~~~~~~~~~G--------lpTsl-~~sg~qWd~PnvWppl~~~~i~GL~~yG 456 (557)
+| +++. +.++++++.+-+-+... +.+| +|... ..+.-|=+ -||+-.+|-+..-|..-|
T Consensus 701 ~gl~~i~~~---~~vrsAL~tIy~~NVm~-----~~~G~~GAVNGm~p~G~VD~ssiQS~--EvW~GvtYalAAtMIqeG 770 (879)
T KOG2119|consen 701 CGLPPIFPE---EKVRSALDTIYDFNVMK-----FKGGRMGAVNGMLPSGKVDTSSIQSR--EVWAGVTYALAATMIQEG 770 (879)
T ss_pred cCCCccCch---HHHHHHHHHHHhhceee-----ecCCceeccccccCCCccccccceeh--hhhccHHHHHHHHHHHHh
Confidence 11 3444 77788888877655543 3333 12111 11111211 388888876665555555
Q ss_pred cHHHHHHHHHHHH
Q psy3156 457 DKLAKQVAYRLAE 469 (557)
Q Consensus 457 ~~~~~~lA~~la~ 469 (557)
..+ .+...|.
T Consensus 771 ~~e---~~FqTA~ 780 (879)
T KOG2119|consen 771 LVE---KGFQTAS 780 (879)
T ss_pred hHH---hhhhhhh
Confidence 442 4444444
No 30
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=96.64 E-value=0.23 Score=51.69 Aligned_cols=335 Identities=18% Similarity=0.189 Sum_probs=178.2
Q ss_pred CcccCCCCCCcchhhHHHHHHHHHHh-cCCchhHHHHHHHHHHhhhhc-CCCC---------CCccccccCCCC--c---
Q psy3156 124 GFFIPGGRFRELYYWDTYWIVQGILL-CDMKDSARGVIENIISLVDQF-GFMP---------NGARVYYLERSQ--P--- 187 (557)
Q Consensus 124 pfiVPggrF~e~yyWDSyfi~~GLl~-s~~~~~a~~~i~nf~~~i~~~-G~IP---------ng~r~yy~~rSQ--P--- 187 (557)
|||+-| --+-+|..||-=.++-.+. ...-+..+.+|..++..+-++ ..-| |+.. .-..+++ |
T Consensus 51 ~FvlTG-DIPAmWLRDStaQvrPYL~lAkeD~~l~~li~GlvkrQ~~~i~~DPYANAFn~~~n~~G-hq~D~T~m~~~vw 128 (434)
T COG3538 51 PFVLTG-DIPAMWLRDSTAQVRPYLPLAKEDEELRRLIAGLVKRQARYILLDPYANAFNETANGAG-HQTDHTEMNPWVW 128 (434)
T ss_pred eEEEec-CchHHHHhcchhhhccceeecccCHHHHHHHHHHHHHHHHHhhcChhhhhcccccccCC-cccCcccccchhh
Confidence 577765 4588999999877666543 334444555666655554332 1112 1110 0011221 1
Q ss_pred ---------CcHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhh
Q psy3156 188 ---------PLLIPMAASYAKYTGDTN-FIRTHLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDY 257 (557)
Q Consensus 188 ---------Pl~~~mv~~~~~~t~D~~-~l~~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~ 257 (557)
=+.++....|++.|+|.+ |=.....+++..++-|....+... ++ -+++-.+ .-|+ +|.
T Consensus 129 ERKYEiDSLCYPiqLAYl~wk~Tg~t~~Fde~f~~a~~~il~~~~~eQ~h~~--~s----pY~F~R~--t~r~----~dT 196 (434)
T COG3538 129 ERKYEIDSLCYPIQLAYLYWKATGDTSQFDEDFRQAVETILRVWKVEQDHET--DS----PYRFERD--TDRK----SDT 196 (434)
T ss_pred eeeeeccchhhHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHhHhhccCC--CC----Ceeeecc--cccc----chh
Confidence 124677788899999865 445566788888888876544321 11 1222111 0111 122
Q ss_pred hhhhhccChhHHHHHHHHhhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHH-HcCCh
Q psy3156 258 HEAADLQTEDEKNFLYSELKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWL-KFGNK 336 (557)
Q Consensus 258 ~~~~~~~~~~~~~~~y~~l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~-~lG~~ 336 (557)
........+ .+-.|+--|. |. .+.=.|....-|--|.++......+.+|.+ ..++.
T Consensus 197 L~~~G~G~~------------~a~tGM~wSg--FR---------PSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~~~ 253 (434)
T COG3538 197 LGRAGKGAP------------TAPTGMTWSG--FR---------PSDDACEYGYLIPSNMFAVVVLSYLQEILEALPHDA 253 (434)
T ss_pred hhhCCCCCC------------cCcccceecC--cC---------CCccchhcccccccchhhhhhHHHHHHHHHHccccH
Confidence 111111000 0112332210 00 000133444556668888888888888888 55788
Q ss_pred hhHHHHHHHHHHHHHHHHHh--ccccccceEEeEEcCCCccc----ccccccchHHHhhccCCCChHHHHHHHHHHHhcc
Q psy3156 337 DLSAKYKKIAYQLLEAIHEV--LWNEQVGVWLDYDIKNKKPR----NYFYVSNITPLWTLSYKFSKQYVAERVLQYLRDN 410 (557)
Q Consensus 337 ~~a~~~~~~A~~~k~aI~~~--lWdee~g~~~D~d~~~~~~~----~~~~~s~~~PL~~g~~~~~~~~~a~~v~~~L~~~ 410 (557)
+-|.+.+++++++++.|.++ +=++.-|-.|.|.++.-... ..--+|.+.-=+.|.... ++..-.+..+.+.++
T Consensus 254 ~~a~~a~~L~~eIq~Gi~~~g~~~~~~~~~iyAyEVDG~Gn~l~MDDaNvPSLLa~PYLG~c~~-dDpvY~~TRk~iLS~ 332 (434)
T COG3538 254 EIARQAKELANEIQQGIEQFGKMDHPKGGEIYAYEVDGLGNQLFMDDANVPSLLAAPYLGFCEK-DDPVYQNTRKTILSS 332 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhceecCCCCCeeEEEEecCCCceeeccCCCchhhhhhhhhccccC-CCHHHHHHHHHHHhc
Confidence 88888999999999999875 33667777888876532211 112234443334555543 113333333333322
Q ss_pred c--cccccCccccCCccccc--cCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhhhhcCccc
Q psy3156 411 E--IITKDNQVKFYGTPTSL--FNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNYMGYETSKAMF 486 (557)
Q Consensus 411 ~--~l~~~~~~~~~GlpTsl--~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~~~~~~tG~m~ 486 (557)
+ .+ +.|-..+.+ .+++. .+|||- .++++||-.....+ -..| |.+....=..||.|+
T Consensus 333 eNPYy------~eG~~a~GiGSpHTp~----~yvWpi--aLaiqgLTa~D~~e----k~~i----L~~L~~tdaGTg~MH 392 (434)
T COG3538 333 ENPYY------YEGKYASGIGSPHTPD----HYVWPI--ALAIQGLTANDDSE----KKEI----LDMLKATDAGTGLMH 392 (434)
T ss_pred CCCce------ecceeeccCCCCCCCC----cccchH--HHHHhhcccCChHH----HHHH----HHHHHhccCCcccee
Confidence 1 11 123222222 12222 248874 78899997766553 2333 233333334579999
Q ss_pred ccccccccCCCCCCccccCCCCCcchHHHHHHHHHHH
Q psy3156 487 EKYDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRY 523 (557)
Q Consensus 487 EkYd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~ 523 (557)
|-||+..+..-. ..=|+|.|..+-.|+-.+
T Consensus 393 E~f~vd~P~~fT-------R~WFsWAN~mF~Elild~ 422 (434)
T COG3538 393 EGFDVDDPEQFT-------REWFSWANMMFCELILDL 422 (434)
T ss_pred cccCCCCHHHhh-------hHHHHHHHHHHHHHHHHH
Confidence 999999875332 267999999877766554
No 31
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=94.18 E-value=8.9 Score=40.57 Aligned_cols=161 Identities=12% Similarity=-0.007 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcc-----ccccccc-c---hH
Q psy3156 315 LNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKP-----RNYFYVS-N---IT 385 (557)
Q Consensus 315 LNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~-----~~~~~~s-~---~~ 385 (557)
.|..++..+ .|..++++.|+ ..|.++|+++.+.+.+.+++++.|.++........+ .....++ + .+
T Consensus 172 ~~~~~h~~~-all~l~~~tgd----~~~~~~A~~l~~~~~~~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~Pgh~~e~a~ 246 (384)
T cd00249 172 SNPHMHLLE-AMLAAYEATGE----QKYLDRADEIADLILDRFIDAESGVVREHFDEDWNPYNGDKGRHQEPGHQFEWAW 246 (384)
T ss_pred CChhHHHHH-HHHHHHHHhCC----HHHHHHHHHHHHHHHHHhcCcccCeEEEEECCCCCCCcCcCCCcCCCchHHHHHH
Confidence 566655444 46667777775 358899999999999999998888777543221110 1111111 1 11
Q ss_pred HH--hhccCCC-ChHHHHHHHHHHHhccccccccCccccCCccc-cccCCC-CCCCCCCcCcchHHHHHHHHHhh----C
Q psy3156 386 PL--WTLSYKF-SKQYVAERVLQYLRDNEIITKDNQVKFYGTPT-SLFNST-QQWDYPNAWAPLQAFIIQGLDYT----Q 456 (557)
Q Consensus 386 PL--~~g~~~~-~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpT-sl~~sg-~qWd~PnvWppl~~~~i~GL~~y----G 456 (557)
-| +..+..+ .-.+.++++++.+.+.+ +.+ ..||+.- .+...+ .-++...-|| |.-.+.+|... |
T Consensus 247 ~ll~l~~~~~~~~~~~~a~~~~~~~~~~~-~d~----~~G~~~~~~~~~~~~~~~~~~~~w~--~~E~~~a~~~l~~~tg 319 (384)
T cd00249 247 LLLRIASRSGQAWLIEKARRLFDLALALG-WDP----ERGGLYYSFLDDGGLLEDDDKRWWP--QTEALKAALALAGITG 319 (384)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHhC-cCc----cCCCEEEeeECCCCCcccccccccH--HHHHHHHHHHHHHhcC
Confidence 11 1122333 23356777777766443 331 1345543 222222 3455555566 66666666553 5
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhhh--hcCcccccccc
Q psy3156 457 DKLAKQVAYRLAEKWLFTNYMGYE--TSKAMFEKYDV 491 (557)
Q Consensus 457 ~~~~~~lA~~la~r~l~~~~~~~~--~tG~m~EkYd~ 491 (557)
.. ...+.++++.+-..+.+. +.|..+..-|+
T Consensus 320 d~----~~~~~~~~~~~~~~~~~~d~~~G~w~~~~~~ 352 (384)
T cd00249 320 DE----RYWQWYQRAWAYLWRHFIDPEYGLWFGYLDA 352 (384)
T ss_pred CH----HHHHHHHHHHHHHHHhcCCCCCCcceeeECC
Confidence 43 344445555555554443 24656655554
No 32
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=93.04 E-value=0.49 Score=50.62 Aligned_cols=92 Identities=21% Similarity=0.402 Sum_probs=58.2
Q ss_pred CCCCcchhhHH-HHHHHHHHhcCCchhHHHHHHHHHHhh-------hhcCCCCCCcc----ccccCCCCcC-c-------
Q psy3156 130 GRFRELYYWDT-YWIVQGILLCDMKDSARGVIENIISLV-------DQFGFMPNGAR----VYYLERSQPP-L------- 189 (557)
Q Consensus 130 grF~e~yyWDS-yfi~~GLl~s~~~~~a~~~i~nf~~~i-------~~~G~IPng~r----~yy~~rSQPP-l------- 189 (557)
..|...+.||+ .|+++.++.. .++.||.+|+-=.... .++|+- |.+ +-..++-..+ .
T Consensus 28 e~Y~Gh~FWDtE~~~~P~~~~~-~Pe~Ar~lL~YR~~~L~~Ar~~A~~~g~~--GA~yPWeS~~~G~E~t~~~~~~~~e~ 104 (370)
T PF03632_consen 28 EGYKGHVFWDTEIFMLPFFLLT-HPEAARSLLNYRYRTLPQARENAREYGYK--GAMYPWESARTGEECTGPWPAGDYEI 104 (370)
T ss_dssp STTTTSB-THHHHCHHHHHHHS--HHHHHHHHHHHHTTHHHHHHHHHCTT----S----SSBSS-SSB----HHHHTT-T
T ss_pred CCcCCeeeecchHHhcchHhhc-CHHHHHHHHHHHHHHHHHHHHHHHHcCCC--cceeecccccCccccCCCCCchHhhh
Confidence 45999999996 9999999975 5999999988544433 245653 321 1121211112 1
Q ss_pred -----HHHHHHHHHHHcCCHHHHHHH-HHHHHHHHHHHHHc
Q psy3156 190 -----LIPMAASYAKYTGDTNFIRTH-LKSLTNEFEYWMKR 224 (557)
Q Consensus 190 -----~~~mv~~~~~~t~D~~~l~~~-~p~L~ke~~~W~~~ 224 (557)
.+.+++.|+..|+|.+||++. +|.|...=+||.+.
T Consensus 105 Hi~adIa~a~~~Y~~~TgD~~~l~~~g~eil~etArfw~sr 145 (370)
T PF03632_consen 105 HINADIAYAIWQYYQATGDEEFLREYGAEILFETARFWASR 145 (370)
T ss_dssp HHHHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhCCcHHHHHccCHHHHHHHHHHHHHh
Confidence 568899999999999999875 77777777799875
No 33
>PF07971 Glyco_hydro_92: Glycosyl hydrolase family 92; InterPro: IPR012939 This domain occurs within alpha-1,2-mannosidases, which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation [].; PDB: 2WW2_C 2WVY_B 2WVZ_B 2WW0_H 2WZS_D 2WVX_B 2WW1_D 2WW3_C.
Probab=92.82 E-value=0.24 Score=55.00 Aligned_cols=172 Identities=15% Similarity=0.167 Sum_probs=91.2
Q ss_pred CCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCCCccccccCCCC--cCcHHHHHHHHHHHcCCHHHHH
Q psy3156 131 RFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPNGARVYYLERSQ--PPLLIPMAASYAKYTGDTNFIR 208 (557)
Q Consensus 131 rF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPng~r~yy~~rSQ--PPl~~~mv~~~~~~t~D~~~l~ 208 (557)
.|...-.||+|....-|+.-=.++.+.+|++.++...++.|++|...-.-..+.++ -+--+.++..|..-..+.+ ++
T Consensus 111 ~Y~~~s~WDtyRt~~pL~~l~~P~~~~d~v~Slv~~~~~~G~lP~w~~~~~~~~~M~G~~a~~viadA~~kG~~~~D-~~ 189 (502)
T PF07971_consen 111 YYTDFSLWDTYRTQHPLLTLLAPERASDMVQSLVNMYRQGGWLPRWPSPGNETGCMIGDHADPVIADAYAKGIRGFD-WE 189 (502)
T ss_dssp -EESEEHHHHTTTHHHHHHHH-HHHHHHHHHHHHHHHHHHSS--SEESSSB----S-S-THHHHHHHHHHTT---S--HH
T ss_pred ceeccccccchhhhhHHHHHhChHHHHHHHHHHHHHHHHcCCCCcccCCCCccCccCCcchHHHHHHHHHcCCCCcC-HH
Confidence 46677799999988777654459999999999999999999999753222212222 2333334444433222333 57
Q ss_pred HHHHHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhhhhccChhHHHHHHHHhhhhhhcCCCCcc
Q psy3156 209 THLKSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEAADLQTEDEKNFLYSELKAGAETGWDFSS 288 (557)
Q Consensus 209 ~~~p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~~~~~~~~~~~~~y~~l~a~~ESGwD~Ss 288 (557)
++|.+|.+.-. +.....+. ..| ...+++. +.|+=-.
T Consensus 190 ~A~~am~~~a~-------~~~~~~~~------------~gr--~~~~~y~----------------------~~GYvp~- 225 (502)
T PF07971_consen 190 EAYEAMKKNAT-------VPPPNWSY------------EGR--GGLDDYL----------------------KLGYVPA- 225 (502)
T ss_dssp HHHHHHHHHHC--------B-SS-TT------------TBT--TTHHHHH----------------------HHSS----
T ss_pred HHHHHHHHHhh-------cCCCcccc------------cCC--cchhHHH----------------------hCCceec-
Confidence 88888887652 11100000 000 0111111 1121110
Q ss_pred chhhccCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeE
Q psy3156 289 RWFIARDGSNRGGLKYIRTTSIIPVDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDY 368 (557)
Q Consensus 289 Rw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~ 368 (557)
. . ...-.+|--.-=...+--+||++|+.||+.+.++.|.++|...+ .+||+++|++.-.
T Consensus 226 --~---~-----------~~~~~svS~TLEyay~D~~iA~~A~~LG~~~~~~~~~~Rs~ny~-----n~fd~~tgf~~pr 284 (502)
T PF07971_consen 226 --S---D-----------DKHGESVSRTLEYAYDDWAIAQMAKALGKKEDADKFLKRSQNYR-----NVFDPETGFFRPR 284 (502)
T ss_dssp --T---T-----------TTSTTHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHCCGGGGG-----GGEETTTTCE--B
T ss_pred --c---c-----------ccCCccHhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-----HHcCCccCCcccc
Confidence 0 0 00001122222234456789999999999999999998887653 4899999988754
No 34
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=92.51 E-value=13 Score=39.21 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=38.4
Q ss_pred HHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCccc
Q psy3156 323 ANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPR 376 (557)
Q Consensus 323 ~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~ 376 (557)
...+..++++.|+. .|.+++.+.-+.+.+.+||++.|.|+++--.++++.
T Consensus 308 ~~a~~~l~~~tgd~----~~~~~~~~~~~~~~~~~~d~~~G~w~~~~~~~g~~~ 357 (384)
T cd00249 308 LKAALALAGITGDE----RYWQWYQRAWAYLWRHFIDPEYGLWFGYLDADGKVL 357 (384)
T ss_pred HHHHHHHHHhcCCH----HHHHHHHHHHHHHHHhcCCCCCCcceeeECCCCCCc
Confidence 34455567777864 488889999999999999999999999865556543
No 35
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=83.83 E-value=12 Score=39.21 Aligned_cols=85 Identities=22% Similarity=0.302 Sum_probs=47.6
Q ss_pred hhhhhhcCCCCccchhhccCCCCCCCCcccccccccchhHHHHHH-HHH--HHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q psy3156 276 LKAGAETGWDFSSRWFIARDGSNRGGLKYIRTTSIIPVDLNAILQ-MNA--NYLSEWWLKFGNKDLSAKYKKIAYQLLEA 352 (557)
Q Consensus 276 l~a~~ESGwD~SsRw~~~~~g~~~~~l~~i~t~~i~pVDLNa~ly-~~~--~~La~la~~lG~~~~a~~~~~~A~~~k~a 352 (557)
...+.+.|||...-- +.........|++-+..++ ++| +.+..+++..|+ +.|.+.+.+..+.
T Consensus 242 ~~~~~~~G~d~~~gG-----------~~~~~d~~g~~~~~~k~wW~q~Eal~a~~~~~~~tg~----~~~~~~~~~~~~~ 306 (346)
T PF07221_consen 242 FDFALEHGWDREGGG-----------LFYSVDRDGKPPDRSKRWWPQAEALKALLAAYELTGD----EKYLDWARRVWDY 306 (346)
T ss_dssp HHHHHHHHBSTTTSS-----------B-SEEETTS-BSST-EEHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
T ss_pred HHHHHHheEecCCCe-----------EEEEEeCCCCccccCccccHHHHHHHHHHHHHhccCc----HHHHHHHHHHHHH
Confidence 355778899865320 0011222334555555544 333 234445555565 3478888888999
Q ss_pred HHHhccccccceEEeEEcCCCcc
Q psy3156 353 IHEVLWNEQVGVWLDYDIKNKKP 375 (557)
Q Consensus 353 I~~~lWdee~g~~~D~d~~~~~~ 375 (557)
+.++|=|++.|.|+++--.++++
T Consensus 307 ~~~~~~d~~~G~W~~~l~~dg~~ 329 (346)
T PF07221_consen 307 IFRHFIDPEYGEWFDYLDRDGSP 329 (346)
T ss_dssp HHHHTB-TTTSSB-SEE-TTS-B
T ss_pred HHHhCCCCCCCeeEeeECCCCCC
Confidence 99999999999999987666664
No 36
>PRK13807 maltose phosphorylase; Provisional
Probab=73.98 E-value=14 Score=43.52 Aligned_cols=91 Identities=20% Similarity=0.418 Sum_probs=61.5
Q ss_pred CCCcchhhH-HHHHHHHHHhcCCchhHHHHHHHHHHhh-------hhcCCCCCCc----cccccCCCCcC--------c-
Q psy3156 131 RFRELYYWD-TYWIVQGILLCDMKDSARGVIENIISLV-------DQFGFMPNGA----RVYYLERSQPP--------L- 189 (557)
Q Consensus 131 rF~e~yyWD-Syfi~~GLl~s~~~~~a~~~i~nf~~~i-------~~~G~IPng~----r~yy~~rSQPP--------l- 189 (557)
.|+.-..|| ..|+++-++..-.++.||.+|.-=.... .+.|+- |. ++. .++-..| .
T Consensus 349 ~Y~Gh~FWDtE~f~lP~~~~~~~Pe~Ar~lL~YR~~~L~~Ar~~A~~~g~~--GA~yPW~s~-~G~E~~~~w~~~~~e~H 425 (756)
T PRK13807 349 KYGGATYWDTEAYCVPFYLATADPEVTRNLLKYRYNQLPGAKENAKKQGLK--GALYPMVTF-NGIECHNEWEITFEEIH 425 (756)
T ss_pred CcCCeeeeccchhhhhhhhhccCHHHHHHHHHHHHHhHHHHHHHHHHcCCC--ccccceEcC-CCCcCCCCcCCCceeEe
Confidence 488899999 7888876444446999999987433322 245652 21 111 1221122 1
Q ss_pred ----HHHHHHHHHHHcCCHHHHHHH-HHHHHHHHHHHHHc
Q psy3156 190 ----LIPMAASYAKYTGDTNFIRTH-LKSLTNEFEYWMKR 224 (557)
Q Consensus 190 ----~~~mv~~~~~~t~D~~~l~~~-~p~L~ke~~~W~~~ 224 (557)
.+.+|+.|++.|+|.+||++. +|.|...-+||.+.
T Consensus 426 I~adIaya~~~Y~~~TgD~~fl~~~G~e~l~etArfw~s~ 465 (756)
T PRK13807 426 RNGAIAYAIYNYTNYTGDESYLKEEGLEVLVEIARFWADR 465 (756)
T ss_pred chHHHHHHHHHHHHHhCCHHHHHhcCHHHHHHHHHHHHHh
Confidence 568899999999999999874 77777777899875
No 37
>COG3537 Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]
Probab=73.81 E-value=28 Score=39.62 Aligned_cols=45 Identities=18% Similarity=0.389 Sum_probs=36.6
Q ss_pred CCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhcCCCCC
Q psy3156 131 RFRELYYWDTYWIVQGILLCDMKDSARGVIENIISLVDQFGFMPN 175 (557)
Q Consensus 131 rF~e~yyWDSyfi~~GLl~s~~~~~a~~~i~nf~~~i~~~G~IPn 175 (557)
.|-..=.||||=++.-|+.-=.++...+||+.|+.--++.|++|.
T Consensus 359 ~ysnyslWDTyRtl~PL~sli~p~ry~dml~sll~ty~~tG~~p~ 403 (768)
T COG3537 359 LYSNYSLWDTYRTLFPLLSLIQPQRYSDMLQSLLNTYEQTGALPK 403 (768)
T ss_pred cccccchHHHHHhhhhHHHHhhhHHHHHHHHHHHHhhhhcCCccc
Confidence 344555899998877776444689999999999999999999995
No 38
>KOG2429|consensus
Probab=73.73 E-value=8.2 Score=42.83 Aligned_cols=68 Identities=26% Similarity=0.344 Sum_probs=49.6
Q ss_pred HHHh-cCCchhHHHHHHHHHHhhhhcCCCCCC----------ccccccCCCCcCcHHHHHHHHHHHcCCHHHH---HHHH
Q psy3156 146 GILL-CDMKDSARGVIENIISLVDQFGFMPNG----------ARVYYLERSQPPLLIPMAASYAKYTGDTNFI---RTHL 211 (557)
Q Consensus 146 GLl~-s~~~~~a~~~i~nf~~~i~~~G~IPng----------~r~yy~~rSQPPl~~~mv~~~~~~t~D~~~l---~~~~ 211 (557)
||+. .|..+.|..+...|.....+||++|.. .|.+|.=| |=|+-...-+|++|+|.-+| +.++
T Consensus 324 GlqvLaGDvd~A~~~h~~y~~vwkkyG~lPEryN~~~~~~~~~~~~YPLR---PElvEStyyLYrATkdp~yL~vG~~~l 400 (622)
T KOG2429|consen 324 GLQVLAGDVDDAIRTHLMYFSVWKKYGFLPERYNLATQEPPPKREGYPLR---PELVESTYYLYRATKDPFYLHVGEDML 400 (622)
T ss_pred chhhhhcchHHHHHHHHHHHHHHHHcCCCcccccccCCCCCCCcccCCCC---HHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 5543 588999999999999999999999953 35556545 44666667789999997666 3344
Q ss_pred HHHHH
Q psy3156 212 KSLTN 216 (557)
Q Consensus 212 p~L~k 216 (557)
..|++
T Consensus 401 ~sLe~ 405 (622)
T KOG2429|consen 401 KSLEK 405 (622)
T ss_pred HHHHH
Confidence 44443
No 39
>PF08760 DUF1793: Domain of unknown function (DUF1793); InterPro: IPR014870 This domain is found at the C terminus of a glutaminase protein from fungi []. It is also found as a single domain protein in Bacteroides thetaiotaomicron.
Probab=70.25 E-value=1e+02 Score=29.41 Aligned_cols=141 Identities=12% Similarity=0.066 Sum_probs=83.2
Q ss_pred HHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcccccccccchHHHh------hccCCCCh
Q psy3156 323 ANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKPRNYFYVSNITPLW------TLSYKFSK 396 (557)
Q Consensus 323 ~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~~~~~~~s~~~PL~------~g~~~~~~ 396 (557)
...+++|++.+|+.+.|+.|.+.|+.......+.--+.+.. -+.....+. -+-+..+.|+ +++.|+
T Consensus 3 i~A~s~ia~~~G~~~~a~~Y~~~A~~~a~~W~~~a~~~~g~-H~~L~Y~~~-----~sWsl~YNL~~DkLLgl~lfp~-- 74 (171)
T PF08760_consen 3 IGAMSEIASMLGHTEDAANYSDIAKSYASQWQTLAISTDGD-HYTLAYDDP-----GSWSLKYNLYWDKLLGLNLFPE-- 74 (171)
T ss_pred HHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHhhccCCCC-eEEeecCCC-----CCcccccchHHHHhcCcCCCcH--
Confidence 46789999999999999999999999999887766543333 333333211 1123333333 334554
Q ss_pred HHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHH
Q psy3156 397 QYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYTQDKLAKQVAYRLAEKWLFTNY 476 (557)
Q Consensus 397 ~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~yG~~~~~~lA~~la~r~l~~~~ 476 (557)
++.+.-.++-.. ... +||||- ... ..|.-.-|+++-+-..... ..+.++..+.
T Consensus 75 -~Vy~~q~~~Y~~--~~~------~yGlPL--DsR-------~~ytKsDW~~wtAa~a~~~---------~r~~~i~~v~ 127 (171)
T PF08760_consen 75 -SVYDMQSAFYPT--VQN------KYGLPL--DSR-------HTYTKSDWEMWTAALASDD---------TRDAFIDPVW 127 (171)
T ss_pred -HHHHHHHHHHHH--HHH------HcCCcc--CCC-------CcccHHHHHHHHHHHCCHH---------HHHHHHHHHH
Confidence 444443433321 122 899984 211 1456666777766543322 3344555555
Q ss_pred hhhhhc---CcccccccccccCCCC
Q psy3156 477 MGYETS---KAMFEKYDVELIGKTG 498 (557)
Q Consensus 477 ~~~~~t---G~m~EkYd~~~~~~~g 498 (557)
+-..++ ..|.-.|+..++...|
T Consensus 128 ~~~~~t~~~~pftD~y~t~~g~~~~ 152 (171)
T PF08760_consen 128 KFANETPSRVPFTDWYDTTTGKQPG 152 (171)
T ss_pred HHHhCCCCCCCccceeECCCCCcCC
Confidence 444443 5688999998876554
No 40
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=65.57 E-value=23 Score=41.25 Aligned_cols=92 Identities=20% Similarity=0.392 Sum_probs=60.4
Q ss_pred CCCcchhhH-HHHHHHHHHhcCCchhHHHHHHHHHHhh-------hhcCCC----CC--------------------Ccc
Q psy3156 131 RFRELYYWD-TYWIVQGILLCDMKDSARGVIENIISLV-------DQFGFM----PN--------------------GAR 178 (557)
Q Consensus 131 rF~e~yyWD-Syfi~~GLl~s~~~~~a~~~i~nf~~~i-------~~~G~I----Pn--------------------g~r 178 (557)
-|+..-||| ..|+++-|+ .-++++|+++|+-=...+ .++|+- |= +-|
T Consensus 347 gY~GhvfWDTEif~lP~l~-~t~P~vArnLL~YR~~~L~~Ak~nA~~~G~~GAlyPW~S~~~G~E~t~~w~~~~~~~~~~ 425 (772)
T COG1554 347 GYGGHVFWDTEIFVLPFLL-FTDPEVARNLLLYRYNTLPGAKENAKKYGLKGALYPWESATDGDECTPEWEATFERTGWR 425 (772)
T ss_pred ccCCeeeecchHHhhhhhh-ccChHHHHHHHHHHHhcCHHHHHHHHHcCCCcccceeeecCCCCccCCcccccccccccc
Confidence 589999999 678888555 467999999998533322 234543 10 001
Q ss_pred ccccCCCC---cCcHHHHHHHHHHHcCCHHHHHHH-HHHHHHHHHHHHHc
Q psy3156 179 VYYLERSQ---PPLLIPMAASYAKYTGDTNFIRTH-LKSLTNEFEYWMKR 224 (557)
Q Consensus 179 ~yy~~rSQ---PPl~~~mv~~~~~~t~D~~~l~~~-~p~L~ke~~~W~~~ 224 (557)
+ +.++.. +-=.+++|+.|++.|+|.+|++++ ++.|...-+||.+.
T Consensus 426 ~-~~~~~E~Hin~dIAyAv~~Y~q~TgD~~yl~~~G~evl~etArFW~sr 474 (772)
T COG1554 426 V-ASSDREIHINADIAYAVWNYWQVTGDDSYLADCGLEVLLETARFWASR 474 (772)
T ss_pred c-CccccceehhhHHHHHHHHHHhhcCcHHHHHhcCHHHHHHHHHHHHHH
Confidence 1 000000 111568899999999999999987 77776667799864
No 41
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=63.36 E-value=50 Score=34.56 Aligned_cols=154 Identities=16% Similarity=0.185 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcCCCcc---cccccccchHHHhh----ccC
Q psy3156 320 QMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIKNKKP---RNYFYVSNITPLWT----LSY 392 (557)
Q Consensus 320 y~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~~~~~---~~~~~~s~~~PL~~----g~~ 392 (557)
.+..-+.|..+. +|+++ |.+.|++..+-|.+.+||.+.|.|+=... .+.+ ....+...|. +++ .+.
T Consensus 24 ~R~~~~fa~a~~-~g~~~----~l~~A~~~~~fl~~~~~D~~~Gg~~~~~~-~~~~~~~~~~~Y~~af~-l~ala~~~~t 96 (346)
T PF07221_consen 24 ARQLYTFARAYR-LGRPE----YLELAEHGFDFLRKHFRDPEYGGWYRSLD-DGGPLDPQKDLYDQAFA-LLALAEARAT 96 (346)
T ss_dssp HHHHHHHHHHHH-TTSHH----HHHHHHHHHHHHHHTTBTTTTSSBSSEEE-TTEEEE--EEHHHHHHH-HHHHHHHHCT
T ss_pred HHHHHHHHHHHh-cCchh----HHHHHHHHHHHHHHhcccCCCCCEEEEeC-CCCCCccccchHHHHHH-HHHHHHHHHh
Confidence 455556667777 78543 88899999999999999998776653322 2222 1122212221 211 222
Q ss_pred CC-ChHHHHHHHHHHHhccccccccCccccCCccccccCCCCCCCCCCcCcchHHHHHHHHHhh----CcHHHHHHHHHH
Q psy3156 393 KF-SKQYVAERVLQYLRDNEIITKDNQVKFYGTPTSLFNSTQQWDYPNAWAPLQAFIIQGLDYT----QDKLAKQVAYRL 467 (557)
Q Consensus 393 ~~-~~~~~a~~v~~~L~~~~~l~~~~~~~~~GlpTsl~~sg~qWd~PnvWppl~~~~i~GL~~y----G~~~~~~lA~~l 467 (557)
.+ ...+.|+++++.|.+ .+..+ ..+|...+.. ..|..+.. .+.+..+++++... |.. .-.+.
T Consensus 97 g~~~~~~~A~~~~~~l~~-~~~d~----~~g~~~~~~~---~~~~~~r~-~n~~mhl~eA~l~l~~~~~~~----~~~~~ 163 (346)
T PF07221_consen 97 GDPEALELAEQTLEFLER-RFWDP----EGGGYRESFD---PDWSPPRG-QNPHMHLLEAFLALYEATGDP----RYLDR 163 (346)
T ss_dssp T-TTHHHHHHHHHHHHHH-HTEET----TTTEE--EET---TTSSCBEE-HHHHHHHHHHHHHHHHHHHHH----HHHHH
T ss_pred CChhHHHHHHHHHHHHHH-Hhccc----ccCcceeccC---CccccCCC-CChhHHHHHHHHHHHHhccCH----HHHHH
Confidence 22 455677788887763 34331 1233332111 12221101 11223455555442 333 23344
Q ss_pred HHHHHHHHHhhh--hhcCcccccccccc
Q psy3156 468 AEKWLFTNYMGY--ETSKAMFEKYDVEL 493 (557)
Q Consensus 468 a~r~l~~~~~~~--~~tG~m~EkYd~~~ 493 (557)
|++.+..+...+ .++|.+.|.|+..-
T Consensus 164 a~~l~~~~~~~f~~~~~g~~~E~f~~dw 191 (346)
T PF07221_consen 164 AEELLDLFLDRFADPESGALPEFFDRDW 191 (346)
T ss_dssp HHHHHHHHHTTCHHCCTTEETSEEETTS
T ss_pred HHHHHHHHHHHHHHhccCeeeeeecccc
Confidence 444444444222 35699999998753
No 42
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=52.43 E-value=1.9e+02 Score=30.83 Aligned_cols=195 Identities=16% Similarity=0.166 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCh-hhHHHHHHHHHHHHHHHHHhcccccc---ceEEeEEcCCCcccccccccc--hHHH
Q psy3156 314 DLNAILQMNANYLSEWWLKFGNK-DLSAKYKKIAYQLLEAIHEVLWNEQV---GVWLDYDIKNKKPRNYFYVSN--ITPL 387 (557)
Q Consensus 314 DLNa~ly~~~~~La~la~~lG~~-~~a~~~~~~A~~~k~aI~~~lWdee~---g~~~D~d~~~~~~~~~~~~s~--~~PL 387 (557)
|=++++..+. .+.+++.|+. .....|.++|+.+-+-+. .-||++. |+|.+....+....-.-++++ ++=|
T Consensus 88 DD~aw~~la~---l~aye~t~~~~~~~~~yL~~A~~i~~~~~-~~wd~~~cgGGi~W~~~~~~~~~~~Kna~sN~~~~~l 163 (370)
T PF03663_consen 88 DDNAWWALAL---LRAYELTGDQPSDNPKYLDLAKEIFDFLI-SGWDDTSCGGGIWWSIDDTNSGYDYKNAISNGPAAQL 163 (370)
T ss_dssp HHHHHHHHHH---HHHHHHH--H-----HHHHHHHHHHHHHH-HTB-SGG-GS-BEEET----TEEEEEEHHHHHHHHHH
T ss_pred ChHHHHHHHH---HHHHHhhCCCcchHHHHHHHHHHHHHHHH-HhcCCccCCCCccccccccCCCCCcccccchHHHHHH
Confidence 4456655544 4446667765 233479999999998888 6999985 666653211111111112222 2333
Q ss_pred hhccC---CC-ChHHHHHHHHHHHhccccccccCccccCCcc-ccccCCC-CCCCCCCcCcchHHHHHHHHHh-hCcHHH
Q psy3156 388 WTLSY---KF-SKQYVAERVLQYLRDNEIITKDNQVKFYGTP-TSLFNST-QQWDYPNAWAPLQAFIIQGLDY-TQDKLA 460 (557)
Q Consensus 388 ~~g~~---~~-~~~~~a~~v~~~L~~~~~l~~~~~~~~~Glp-Tsl~~sg-~qWd~PnvWppl~~~~i~GL~~-yG~~~~ 460 (557)
-+.++ .+ .--+.|+++.+-+.+.+++.+ .-|+. -.+...+ +.--....|.=-|.+++.|+.. |..+..
T Consensus 164 aarL~~~t~~~~Yl~~A~~~~~W~~~~~L~d~-----~~g~v~Dg~~~~~~c~~~~~~~~TYNqG~~l~a~~~Ly~~T~~ 238 (370)
T PF03663_consen 164 AARLYRITGDQTYLDWAKKIYDWMRDSGLIDP-----STGLVYDGINIDGNCTNINKTKWTYNQGVFLGAAAYLYNATND 238 (370)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHH-HHB-------TTS-B--EE-TTSSS-B-TT---HHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHhcCChHHHHHHHHHHHHhhcceeEEC-----CCcEEEeCCccCCCCCcCCCceechHHHHHHHHHHHHHHhcCC
Confidence 23322 22 122577888888876677741 11211 1111111 1112344888899999999977 433311
Q ss_pred HHHHHHHHHHHHHHHHhhhhhc--Cccccc-ccccccCCCCCCccccCCCCCcchHHHHHHHHHHHcccc
Q psy3156 461 KQVAYRLAEKWLFTNYMGYETS--KAMFEK-YDVELIGKTGNGGEYEAQTGFGWTNGFAFELLNRYGKTI 527 (557)
Q Consensus 461 ~~lA~~la~r~l~~~~~~~~~t--G~m~Ek-Yd~~~~~~~g~gGey~~q~gFGWTngv~L~ll~~~~~~~ 527 (557)
.+.-.+.|++.++.+...+... |.|.|. .++ .+.+ ....++=.|++++-|..+-...
T Consensus 239 ~~~yl~~A~~la~~~~~~~~~~~~gil~e~~ce~--~~~~--------~~d~~~Fkgi~~r~L~~l~~~~ 298 (370)
T PF03663_consen 239 EQTYLDRAEKLADAAINHFFDNGDGILTEEACEP--SGTC--------DGDQPLFKGIFARYLADLAQVA 298 (370)
T ss_dssp H-HHHHHHHHHHHHHHHHHEETT--EE------------S--------SSGGGGHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCeeeecccccc--CcCc--------CCccHHHHHHHHHHHHHHHHHC
Confidence 1123333444444444444333 478886 222 1111 1234677898888877664443
No 43
>PF03475 3-alpha: 3-alpha domain; InterPro: IPR005163 This small triple helical domain has been predicted to assume a topology similar to helix-turn-helix domains. These domains are found at the C terminus of proteins related to the YiiM protein (P32157 from SWISSPROT) from Escherichia coli.; PDB: 1O67_C 1O65_C.
Probab=45.52 E-value=36 Score=24.94 Aligned_cols=40 Identities=15% Similarity=0.068 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q psy3156 313 VDLNAILQMNANYLSEWWLKFGNKDLSAKYKKIAYQLLEA 352 (557)
Q Consensus 313 VDLNa~ly~~~~~La~la~~lG~~~~a~~~~~~A~~~k~a 352 (557)
-.+|.++|.-....+.+.+++.-+..+..|++.++++.+.
T Consensus 5 ~~~~~~~~~~~~n~~~l~~ll~~~~La~~Wr~~~~kRL~~ 44 (47)
T PF03475_consen 5 ARVNRLLYHDRLNPEALERLLALPALAESWRKSFEKRLEK 44 (47)
T ss_dssp HHHHHHHHTS---HHHHHHHHTSTT--HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHcCCcccHHHHHHHHHHHHc
Confidence 3689999999988999999999888999999999887653
No 44
>TIGR01180 aman2_put alpha-1,2-mannosidase, putative. The identification of members of this family as putative alpha-1,2-mannosidases is based on an unpublished characterization of the aman2 gene in Bacillus sp. M-90 by Maruyama,Y., Nakajima,M. and Nakajima,T. Most members of this family appear to have signal sequences. Members from the dental pathogen Porphyromonas gingivalis have been described as immunoreactive with periodontitis patient serum.
Probab=42.23 E-value=3e+02 Score=32.35 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=45.0
Q ss_pred chhhHHHHHHHHHHh----cCCchhHHHHHHHHHHhhhhcCCCCCCcccc-ccCCCCcCcHHHHHHHHHHHcCCHHH-HH
Q psy3156 135 LYYWDTYWIVQGILL----CDMKDSARGVIENIISLVDQFGFMPNGARVY-YLERSQPPLLIPMAASYAKYTGDTNF-IR 208 (557)
Q Consensus 135 ~yyWDSyfi~~GLl~----s~~~~~a~~~i~nf~~~i~~~G~IPng~r~y-y~~rSQPPl~~~mv~~~~~~t~D~~~-l~ 208 (557)
.|.|||+|...=|+. .-.++.+.+||+.+...-+..|++|++...- +.+...-...+.++..-+.. ++..+ ++
T Consensus 353 ~y~wdt~wd~~r~~~~L~~~~~pd~~~~~i~s~~~~g~~~gw~~~~~~~~~~~g~~~g~~~~~~~a~g~~~-g~~~~d~~ 431 (750)
T TIGR01180 353 TYTWDSLWDTYRAVHPLYPLLNPEIQEDMVNSYIEMGFFSGWLPPWHRDCGETGNMSGSHSIDVILDAYRK-GLTRFNMN 431 (750)
T ss_pred cCcccchhhhhhhhhHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCcccCCCcCCccccccHHHHHHHHHHc-CCcCcCHH
Confidence 667888886655432 2358888999888887767778999765433 33333333444444443322 33221 34
Q ss_pred HHHHHH
Q psy3156 209 THLKSL 214 (557)
Q Consensus 209 ~~~p~L 214 (557)
.++.++
T Consensus 432 ~a~~a~ 437 (750)
T TIGR01180 432 GAYHAT 437 (750)
T ss_pred HHHHHH
Confidence 455444
No 45
>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A.
Probab=38.19 E-value=78 Score=21.23 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q psy3156 321 MNANYLSEWWLKFGNKDLSAKYKKIAYQLLEAI 353 (557)
Q Consensus 321 ~~~~~La~la~~lG~~~~a~~~~~~A~~~k~aI 353 (557)
.....|+..+...|+.++|..+.+++-.+++.+
T Consensus 3 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 35 (42)
T PF13374_consen 3 SALNNLANAYRAQGRYEEALELLEEALEIRERL 35 (42)
T ss_dssp HHHHHHHHHHHHCT-HHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHhhhhcchhhHHHHHHHHHHHHH
Confidence 456778888889999999999999988887765
No 46
>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A ....
Probab=30.52 E-value=1.3e+02 Score=19.34 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHcCChhhHHHHHHHHHHHH
Q psy3156 321 MNANYLSEWWLKFGNKDLSAKYKKIAYQLL 350 (557)
Q Consensus 321 ~~~~~La~la~~lG~~~~a~~~~~~A~~~k 350 (557)
.....++.++..+|+.++|..+-+++-++.
T Consensus 2 ~~~~~lg~~y~~~~~~~~A~~~~~~a~~~~ 31 (34)
T PF13181_consen 2 EAYYNLGKIYEQLGDYEEALEYFEKALELN 31 (34)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 456678999999999999988887776654
No 47
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=29.74 E-value=7.1e+02 Score=26.53 Aligned_cols=152 Identities=16% Similarity=0.184 Sum_probs=82.0
Q ss_pred ccccCCHHHHHHHHHHhHHHhhhccccccccccCCCCCcccccCCCcccCCCCCCcchhhHHHHHHHHHH-----hcCCc
Q psy3156 79 ENKISDAKYRQFALDLNQIWKELGRIVKQDVRDNPQLYSLIYTPNGFFIPGGRFRELYYWDTYWIVQGIL-----LCDMK 153 (557)
Q Consensus 79 ~~~i~d~~~~~~~~~i~~~W~~L~r~~~~~v~~~~~~~sli~lp~pfiVPggrF~e~yyWDSyfi~~GLl-----~s~~~ 153 (557)
...+.||.+++++.++-+.=....| +++.+..|-. .|++++-=|+-|++.-.+ ..+++
T Consensus 92 ~e~T~~~~Yl~~a~~~a~~l~~~~R-t~eG~f~H~~----------------~~p~Q~W~DtL~Ma~~F~ak~g~~~~~~ 154 (357)
T COG4225 92 YEQTGDPRYLEAAIKLASWLVHEPR-TKEGGFQHKV----------------KYPHQMWLDTLYMAGLFLAKYGQVTGRP 154 (357)
T ss_pred hhhhCCHHHHHHHHHHHHHHhhCcc-cCCCcccccc----------------CchhHhhhcchhhhhHHHHHHHHHhCCH
Confidence 4566799999998887776555553 4443333221 156555457777654332 34789
Q ss_pred hhHHHHHHHHHHhhhh----------cCCCCCCccccccCCCCcC--------cHHHHHHHHHHH----cCCHHHHHHHH
Q psy3156 154 DSARGVIENIISLVDQ----------FGFMPNGARVYYLERSQPP--------LLIPMAASYAKY----TGDTNFIRTHL 211 (557)
Q Consensus 154 ~~a~~~i~nf~~~i~~----------~G~IPng~r~yy~~rSQPP--------l~~~mv~~~~~~----t~D~~~l~~~~ 211 (557)
+....++..|..+.+. +|+.+++.-..-.+-|.-| ++++++-+.++. .++...|...+
T Consensus 155 e~~d~~~~QF~~~~~~l~Dp~TGL~YH~wd~~~~~~w~~~~sG~~~fWaRg~gW~~mal~d~le~lp~~~~~r~~l~~~l 234 (357)
T COG4225 155 EYFDEALYQFSLHEKYLRDPETGLYYHGWDEDGTMPWANNESGEPAFWARGNGWYAMALADLLELLPEDHPDRRELLNVL 234 (357)
T ss_pred HHHHHHHHHHHHHHHHccCCCcCceEEeeccCCCCccccccCCCceeeecccchHHHHHHHHHHhCCCCCchHHHHHHHH
Confidence 9999999999877641 3677766333222222222 234444444443 23455555555
Q ss_pred HHHHHHHHHHHHccccccccCCceeeeEEeeCCCCCCCCcchhhhhhhh
Q psy3156 212 KSLTNEFEYWMKRHMVTVEKNGKYYTMARYYAPSRGPRPESYREDYHEA 260 (557)
Q Consensus 212 p~L~ke~~~W~~~R~~~~~~~G~~~~L~rY~~~~~~prpEsy~eD~~~~ 260 (557)
-.+.+.+-- ..+ .+| | ++..-+.+||.||.|--.+|
T Consensus 235 ~d~v~al~r---~Qd----e~G----l--W~tiLDd~~~~sy~EsSaSa 270 (357)
T COG4225 235 RDLVDALIR---YQD----ESG----L--WHTILDDGRPGSYLESSASA 270 (357)
T ss_pred HHHHHHHHH---hhc----ccc----c--hhhhhccCCCCCchhhhHHH
Confidence 444444311 111 133 2 11222334899998854443
No 48
>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A.
Probab=28.55 E-value=1.5e+02 Score=19.96 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=22.6
Q ss_pred HHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q psy3156 323 ANYLSEWWLKFGNKDLSAKYKKIAYQLLEA 352 (557)
Q Consensus 323 ~~~La~la~~lG~~~~a~~~~~~A~~~k~a 352 (557)
...|+.++...|+.++|..+-++|-.+...
T Consensus 2 l~~Lg~~~~~~g~~~~Ai~~y~~aL~l~~~ 31 (36)
T PF13176_consen 2 LNNLGRIYRQQGDYEKAIEYYEQALALARD 31 (36)
T ss_dssp HHHHHHHHHHCT-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence 467899999999999998887776555443
No 49
>KOG4125|consensus
Probab=28.26 E-value=4.7e+02 Score=28.94 Aligned_cols=92 Identities=15% Similarity=0.288 Sum_probs=56.7
Q ss_pred CCcchhhHHH-HHHHHHHhcCCchhHHHHHHHHH-------HhhhhcCCCCCC---ccccc-cCCCCcCc----------
Q psy3156 132 FRELYYWDTY-WIVQGILLCDMKDSARGVIENII-------SLVDQFGFMPNG---ARVYY-LERSQPPL---------- 189 (557)
Q Consensus 132 F~e~yyWDSy-fi~~GLl~s~~~~~a~~~i~nf~-------~~i~~~G~IPng---~r~yy-~~rSQPPl---------- 189 (557)
|..--.||+- |+.+.++.. .++.|+.||+-=. ...+.+|+---- ...|| +..|.||-
T Consensus 293 Y~GHvFWD~diWM~P~il~F-~p~~A~~~L~YR~RtL~~Ak~nA~~~GY~GA~FpWESA~~G~EV~~e~~~~~QE~Hin~ 371 (682)
T KOG4125|consen 293 YGGHVFWDADIWMEPALLPF-FPNVAQNMLNYRNRTLSQAKLNAEKYGYPGAIFPWESAKYGNEVSTEGPCVDQEYHINV 371 (682)
T ss_pred cCCceeecchhhhhhhhhhc-CHHHHHHHHHhhhhhHHHHHhhHHhcCCCCccccccccccccccCCCCCceeEEEEecH
Confidence 4444578875 455555554 4999999987432 233456652110 01122 22344443
Q ss_pred -HHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHHHc
Q psy3156 190 -LIPMAASYAKYTGDTNFIRT-HLKSLTNEFEYWMKR 224 (557)
Q Consensus 190 -~~~mv~~~~~~t~D~~~l~~-~~p~L~ke~~~W~~~ 224 (557)
.+++...|+..+.|.+|++- ..|....--+||.+.
T Consensus 372 dv~~Af~~y~h~~~D~e~~~~t~Wpi~~~VA~F~~SR 408 (682)
T KOG4125|consen 372 DVAMAFSIYLHEGIDDEYLRYTTWPIIKNVAQFFTSR 408 (682)
T ss_pred HHHHHHHHHHHhccchhhhccCCchhHHHHHHHhhhe
Confidence 56788889999999998765 577777777798864
No 50
>PF14716 HHH_8: Helix-hairpin-helix domain; PDB: 2W9M_A 1HUZ_A 1HUO_A 2BPG_B 2BPF_A 1DK3_A 1BPE_A 1BNO_A 1BNP_A 1DK2_A ....
Probab=26.30 E-value=1.7e+02 Score=23.01 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHc-CChhhHHHHHHHHHHHHH
Q psy3156 316 NAILQMNANYLSEWWLKF-GNKDLSAKYKKIAYQLLE 351 (557)
Q Consensus 316 Na~ly~~~~~La~la~~l-G~~~~a~~~~~~A~~~k~ 351 (557)
|.-+...+..|+++++.. |+.-++..|++.|..++.
T Consensus 1 N~~i~~~L~~la~~~~~~~~~~~r~~aY~~Aa~~i~~ 37 (68)
T PF14716_consen 1 NQEIADALEELADLYELQGGDPFRARAYRRAAAAIKA 37 (68)
T ss_dssp THHHHHHHHHHHHHHHHTSTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHh
Confidence 556778889999999999 777777778887776654
No 51
>PF08849 DUF1819: Putative inner membrane protein (DUF1819); InterPro: IPR014948 These proteins are functionally uncharacterised. Several are annotated as putative inner membrane proteins. ; PDB: 3BHW_A.
Probab=25.14 E-value=2.3e+02 Score=27.07 Aligned_cols=68 Identities=19% Similarity=0.421 Sum_probs=41.9
Q ss_pred cchhhHHHHHHHHHHhcC----CchhHHHHHHHHHHhhhhcCCCCCCccccccCCCCcCcHHHHHHHHHHHcCCHH
Q psy3156 134 ELYYWDTYWIVQGILLCD----MKDSARGVIENIISLVDQFGFMPNGARVYYLERSQPPLLIPMAASYAKYTGDTN 205 (557)
Q Consensus 134 e~yyWDSyfi~~GLl~s~----~~~~a~~~i~nf~~~i~~~G~IPng~r~yy~~rSQPPl~~~mv~~~~~~t~D~~ 205 (557)
...-||+||.-+...... ...+.+.+-.++.....+.|++=+. +. .+-|||++...|..|.+..++.+
T Consensus 117 ~~~d~~~F~~~k~~~~~~i~~WSdsT~~Kl~~~~~~~L~eaGlL~~~-~~---~~i~~~~l~~~~~~~l~~~~~~~ 188 (189)
T PF08849_consen 117 TKEDWDAFFEEKAEQDPEIASWSDSTIKKLRQVLFRILREAGLLEGS-RS---KKIQPPLLSPEVREYLKRNGESD 188 (189)
T ss_dssp -HHHHHHHHHHHHHH-TTS----HHHHHHHHHHHHHHHHHTTSBS-T-TT----BB------HHHHHHHHHTT-HH
T ss_pred CHHHHHHHHHHHHhcCCcccccCHHHHHHHHHHHHHHHHHcCCccCC-CC---CeeecCcCCHHHHHHHHHhCccc
Confidence 567899999887654332 3556677777888888999999542 21 23489999999999998877654
No 52
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=23.28 E-value=53 Score=26.48 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHhhhCCCCCChHHHHH
Q psy3156 26 QPEDVILAKFRALLTNNADPDTTTLTN 52 (557)
Q Consensus 26 ~~~~~~l~~f~~~~~~~~~~~~~~l~~ 52 (557)
.++++|+++|+.+...+.-++..+|++
T Consensus 3 ~s~eqv~~aFr~lA~~KpyVT~~dLr~ 29 (69)
T PF08726_consen 3 DSAEQVEEAFRALAGGKPYVTEEDLRR 29 (69)
T ss_dssp STCHHHHHHHHHHCTSSSCEEHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCcccHHHHHH
Confidence 468999999999966555566677664
No 53
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=22.76 E-value=1.3e+02 Score=34.78 Aligned_cols=41 Identities=20% Similarity=0.317 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEE
Q psy3156 324 NYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYD 369 (557)
Q Consensus 324 ~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d 369 (557)
..|..++++.++. .|-+.|.++.+.+...|||++.| |||..
T Consensus 475 ~gll~lye~t~d~----~yL~~A~~L~~~~i~~f~d~~gG-f~~t~ 515 (667)
T COG1331 475 LGLLALYEATGDL----AYLEKAIELADEAIADFWDDEGG-FYDTP 515 (667)
T ss_pred HHHHHHHHhhCcH----HHHHHHHHHHHHHHHHhcCCCCC-cccCC
Confidence 3455566666653 59999999999999999999966 88754
No 54
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=21.84 E-value=1.1e+03 Score=27.39 Aligned_cols=44 Identities=18% Similarity=0.335 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCChhhHHHHHHHHHHHHHHHHHhccccccceEEeEEcC
Q psy3156 324 NYLSEWWLKFGNKDLSAKYKKIAYQLLEAIHEVLWNEQVGVWLDYDIK 371 (557)
Q Consensus 324 ~~La~la~~lG~~~~a~~~~~~A~~~k~aI~~~lWdee~g~~~D~d~~ 371 (557)
...++.+...|+. .|+..|+....-+.+.||.++.|+|...|-.
T Consensus 280 ~~y~~ay~~tgd~----~y~~~a~~i~~~l~rel~sp~ggFyss~DAD 323 (667)
T COG1331 280 RAYAEAYRATGDD----LYRRAAEGILDYLLRELYSPEGGFYSSLDAD 323 (667)
T ss_pred HHHHHHHHHhCCH----HHHHHHHHHHHHHHHHhcCCCCceeeccccc
Confidence 3456677778875 5999999999999999999999877655544
No 55
>PF09061 Stirrup: Stirrup; InterPro: IPR015146 The Stirrup domain, found in the prokaryotic protein ribonucleotide reductase, has a molecular mass of 9 kDa and is folded into an alpha/beta structure. It allows for binding of the reductase to DNA via electrostatic interactions, since it has a predominance of positive charges distributed on its surface []. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1DQ3_A.
Probab=21.72 E-value=1.4e+02 Score=23.76 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=22.6
Q ss_pred CCCCcCcHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy3156 183 ERSQPPLLIPMAASYAKYTGDTNFIRTHLKSLT 215 (557)
Q Consensus 183 ~rSQPPl~~~mv~~~~~~t~D~~~l~~~~p~L~ 215 (557)
+|-...++.-|+..+|+.|++.+ +++++..++
T Consensus 48 grvskavlvkmlrkly~~tk~e~-vkrmlhlie 79 (79)
T PF09061_consen 48 GRVSKAVLVKMLRKLYEATKNEE-VKRMLHLIE 79 (79)
T ss_dssp S-EEHHHHHHHHHHHHHHH--HH-HHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhhchHH-HHHHHHhcC
Confidence 34456789999999999999976 677776653
No 56
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=21.55 E-value=2.2e+02 Score=23.95 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=26.2
Q ss_pred cchhhHHHHHHHHHHhcCCchhHHHH--HHHHHHhhhhcCC
Q psy3156 134 ELYYWDTYWIVQGILLCDMKDSARGV--IENIISLVDQFGF 172 (557)
Q Consensus 134 e~yyWDSyfi~~GLl~s~~~~~a~~~--i~nf~~~i~~~G~ 172 (557)
+-.-|+|++++..|...+...-...+ ++-+..+++.+|-
T Consensus 20 ~~~~~~T~~al~aL~~~g~~~~~~~~~~~~~L~~~q~~dGg 60 (113)
T PF13249_consen 20 PSDVWDTAFALLALAALGEEPDRDRAAAVEWLLSQQNPDGG 60 (113)
T ss_dssp -BEHHHHHHHHHHHHHHTSHHCHHHHHHHHHHHHHB-TTSG
T ss_pred CCCHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHhCCCCCC
Confidence 56788999999999987765544555 6666666664543
Done!