Query psy3157
Match_columns 822
No_of_seqs 585 out of 4282
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 17:51:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3157.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3157hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 4.5E-27 9.7E-32 256.5 28.0 360 213-805 17-381 (394)
2 PRK03545 putative arabinose tr 99.9 2.5E-25 5.5E-30 250.4 30.1 170 214-385 14-186 (390)
3 PRK10091 MFS transport protein 99.9 1.6E-24 3.5E-29 243.3 30.4 172 213-386 7-181 (382)
4 PRK09705 cynX putative cyanate 99.9 1.3E-24 2.9E-29 245.0 29.7 149 226-375 26-176 (393)
5 PRK11663 regulatory protein Uh 99.9 1.6E-24 3.4E-29 247.6 28.5 169 217-387 31-202 (434)
6 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.9E-24 4.1E-29 245.3 27.7 175 213-388 12-194 (412)
7 PRK11551 putative 3-hydroxyphe 99.9 2.2E-24 4.7E-29 244.0 27.6 173 213-387 19-194 (406)
8 COG2271 UhpC Sugar phosphate p 99.9 3.1E-25 6.8E-30 238.5 19.4 373 235-815 54-439 (448)
9 TIGR01299 synapt_SV2 synaptic 99.9 2.4E-24 5.1E-29 256.6 27.3 175 213-389 171-360 (742)
10 PRK10213 nepI ribonucleoside t 99.9 4.6E-24 9.9E-29 240.7 28.3 170 214-385 25-197 (394)
11 TIGR00899 2A0120 sugar efflux 99.9 5.5E-24 1.2E-28 237.3 28.0 170 217-387 5-180 (375)
12 PRK11646 multidrug resistance 99.9 1.7E-23 3.8E-28 236.4 31.9 171 213-385 14-187 (400)
13 TIGR00893 2A0114 d-galactonate 99.9 1.5E-24 3.2E-29 242.0 22.8 166 217-387 5-173 (399)
14 PRK03699 putative transporter; 99.9 1.4E-23 3E-28 236.7 29.9 165 213-378 11-178 (394)
15 TIGR00903 2A0129 major facilit 99.9 4.5E-24 9.7E-29 238.1 25.0 166 221-388 3-170 (368)
16 PRK09556 uhpT sugar phosphate 99.9 1E-24 2.2E-29 251.7 20.4 161 227-388 47-217 (467)
17 TIGR00890 2A0111 Oxalate/Forma 99.9 1.1E-23 2.5E-28 233.9 27.5 157 228-386 22-180 (377)
18 TIGR00891 2A0112 putative sial 99.9 6.5E-24 1.4E-28 238.8 25.7 172 213-386 16-191 (405)
19 TIGR00892 2A0113 monocarboxyla 99.9 1.9E-23 4.2E-28 240.0 27.2 152 231-384 41-195 (455)
20 PRK14995 methyl viologen resis 99.9 1E-22 2.2E-27 236.6 30.5 173 213-387 10-186 (495)
21 PRK05122 major facilitator sup 99.9 2.9E-23 6.3E-28 234.3 24.6 161 213-374 19-190 (399)
22 TIGR00900 2A0121 H+ Antiporter 99.9 7.9E-23 1.7E-27 226.2 25.3 163 214-378 4-174 (365)
23 KOG2532|consensus 99.9 3.4E-24 7.3E-29 243.3 14.3 358 239-806 67-443 (466)
24 KOG2504|consensus 99.9 1.5E-22 3.2E-27 232.7 26.8 397 231-808 67-474 (509)
25 PRK12382 putative transporter; 99.9 1.9E-22 4.2E-27 227.1 27.4 159 213-372 19-188 (392)
26 PRK15011 sugar efflux transpor 99.9 3.6E-22 7.8E-27 225.2 29.5 173 213-387 19-198 (393)
27 PRK11273 glpT sn-glycerol-3-ph 99.9 3E-22 6.6E-27 230.0 29.3 156 230-388 50-213 (452)
28 PLN00028 nitrate transmembrane 99.9 2.2E-22 4.7E-27 232.6 27.7 166 216-382 43-218 (476)
29 TIGR00881 2A0104 phosphoglycer 99.9 4.6E-23 1E-27 229.1 21.2 167 217-388 6-176 (379)
30 PRK10504 putative transporter; 99.9 8.5E-22 1.8E-26 227.5 32.1 171 213-385 14-187 (471)
31 PRK09874 drug efflux system pr 99.9 5.1E-22 1.1E-26 224.4 29.3 172 213-386 18-196 (408)
32 PRK10054 putative transporter; 99.9 6E-22 1.3E-26 223.5 29.5 173 212-386 10-185 (395)
33 PRK10489 enterobactin exporter 99.9 1.7E-22 3.8E-27 229.5 24.4 169 215-386 23-199 (417)
34 TIGR00897 2A0118 polyol permea 99.9 5.7E-22 1.2E-26 224.2 28.5 170 213-384 17-194 (402)
35 PRK12307 putative sialic acid 99.9 6.3E-22 1.4E-26 225.3 28.3 157 213-371 22-181 (426)
36 PRK15402 multidrug efflux syst 99.9 6.2E-22 1.3E-26 224.1 27.9 171 214-386 18-191 (406)
37 TIGR00902 2A0127 phenyl propri 99.9 9.3E-22 2E-26 220.9 27.8 360 213-805 8-374 (382)
38 PRK03633 putative MFS family t 99.9 1E-21 2.3E-26 220.4 27.9 145 212-357 9-156 (381)
39 TIGR00894 2A0114euk Na(+)-depe 99.9 6.4E-23 1.4E-27 236.5 17.8 149 239-387 70-223 (465)
40 TIGR00711 efflux_EmrB drug res 99.9 4.6E-22 9.9E-27 230.2 25.0 172 213-386 6-180 (485)
41 TIGR00712 glpT glycerol-3-phos 99.9 6E-22 1.3E-26 226.7 25.1 153 235-388 52-211 (438)
42 TIGR00879 SP MFS transporter, 99.9 2.2E-22 4.7E-27 230.8 20.8 168 217-387 36-220 (481)
43 cd06174 MFS The Major Facilita 99.9 2.3E-21 4.9E-26 212.8 28.0 339 213-805 3-347 (352)
44 PRK15403 multidrug efflux syst 99.9 2.7E-21 5.9E-26 219.5 29.0 171 215-387 22-195 (413)
45 PRK09952 shikimate transporter 99.9 1.4E-21 3E-26 223.7 25.9 160 213-374 26-211 (438)
46 PRK10473 multidrug efflux syst 99.9 2.8E-21 6.1E-26 217.6 28.0 172 214-387 8-182 (392)
47 COG2223 NarK Nitrate/nitrite t 99.9 1E-21 2.3E-26 212.0 22.3 363 214-806 18-397 (417)
48 PRK03893 putative sialic acid 99.9 9.6E-21 2.1E-25 220.0 31.7 158 213-372 24-184 (496)
49 PRK10406 alpha-ketoglutarate t 99.9 3.2E-21 6.9E-26 220.3 26.6 158 216-375 29-211 (432)
50 TIGR00710 efflux_Bcr_CflA drug 99.9 5.2E-21 1.1E-25 214.0 27.8 172 214-387 10-184 (385)
51 PF07690 MFS_1: Major Facilita 99.9 3.9E-22 8.5E-27 219.7 17.7 172 216-388 3-177 (352)
52 PRK15034 nitrate/nitrite trans 99.9 4.1E-21 9E-26 216.8 25.9 170 216-385 41-234 (462)
53 PRK11128 putative 3-phenylprop 99.9 4.6E-21 9.9E-26 215.3 26.1 157 216-376 11-172 (382)
54 PRK11195 lysophospholipid tran 99.9 2E-20 4.3E-25 211.0 30.8 168 213-387 7-177 (393)
55 TIGR00882 2A0105 oligosacchari 99.9 8.4E-21 1.8E-25 214.2 26.5 171 213-385 6-185 (396)
56 PRK10642 proline/glycine betai 99.9 1.2E-20 2.6E-25 219.0 27.9 172 213-387 20-216 (490)
57 PRK09528 lacY galactoside perm 99.9 7.1E-21 1.5E-25 216.5 24.9 171 213-385 14-193 (420)
58 TIGR00886 2A0108 nitrite extru 99.9 3.4E-20 7.4E-25 206.2 29.1 175 213-387 5-192 (366)
59 TIGR00887 2A0109 phosphate:H+ 99.9 5.6E-20 1.2E-24 214.1 31.5 176 213-389 20-230 (502)
60 KOG2615|consensus 99.9 4.6E-20 9.9E-25 195.1 25.3 151 241-391 64-221 (451)
61 TIGR00896 CynX cyanate transpo 99.9 1.5E-20 3.3E-25 208.7 23.2 149 224-374 15-166 (355)
62 PRK10133 L-fucose transporter; 99.9 2.5E-20 5.4E-25 213.1 25.4 141 214-355 31-177 (438)
63 TIGR00895 2A0115 benzoate tran 99.9 1.9E-20 4E-25 209.8 23.3 171 216-388 24-197 (398)
64 PRK11652 emrD multidrug resist 99.9 3.7E-20 8E-25 208.7 24.9 170 215-386 14-186 (394)
65 PRK15075 citrate-proton sympor 99.9 5.8E-20 1.3E-24 210.0 26.8 156 213-370 19-199 (434)
66 PRK11043 putative transporter; 99.9 4.9E-20 1.1E-24 208.2 25.5 165 214-380 11-178 (401)
67 PRK11102 bicyclomycin/multidru 99.9 7.8E-20 1.7E-24 204.4 26.0 163 223-387 5-170 (377)
68 PRK10077 xylE D-xylose transpo 99.8 1.3E-19 2.8E-24 209.6 26.4 172 214-388 17-219 (479)
69 TIGR00889 2A0110 nucleoside tr 99.8 3.6E-20 7.7E-25 210.6 20.8 166 213-387 6-183 (418)
70 PRK06814 acylglycerophosphoeth 99.8 1.8E-19 3.8E-24 230.2 28.3 141 245-387 52-198 (1140)
71 PRK11010 ampG muropeptide tran 99.8 2.2E-19 4.8E-24 208.2 25.3 170 213-386 16-197 (491)
72 PRK08633 2-acyl-glycerophospho 99.8 4.5E-19 9.6E-24 226.8 29.1 153 235-387 35-203 (1146)
73 TIGR00885 fucP L-fucose:H+ sym 99.8 9.3E-19 2E-23 198.4 28.0 165 213-378 7-202 (410)
74 TIGR00883 2A0106 metabolite-pr 99.8 3.5E-19 7.6E-24 199.0 23.1 134 242-376 27-184 (394)
75 PRK11902 ampG muropeptide tran 99.8 1.4E-18 3.1E-23 196.5 26.4 168 215-386 5-184 (402)
76 PF05977 MFS_3: Transmembrane 99.8 2.7E-18 5.7E-23 198.5 27.5 366 213-805 14-389 (524)
77 TIGR00924 yjdL_sub1_fam amino 99.8 1.2E-17 2.7E-22 192.7 31.3 165 213-378 14-187 (475)
78 TIGR00898 2A0119 cation transp 99.8 7.6E-19 1.6E-23 204.7 18.0 148 236-388 115-268 (505)
79 KOG1330|consensus 99.8 3.8E-19 8.2E-24 193.4 14.2 175 214-389 38-215 (493)
80 KOG2533|consensus 99.8 1.2E-18 2.6E-23 198.6 18.4 154 237-390 73-234 (495)
81 PRK10207 dipeptide/tripeptide 99.8 2.2E-16 4.8E-21 182.6 34.4 161 213-374 18-185 (489)
82 PF06609 TRI12: Fungal trichot 99.8 1.8E-17 4E-22 191.0 24.6 147 235-383 69-217 (599)
83 KOG3764|consensus 99.8 1.7E-18 3.7E-23 184.3 14.1 147 239-386 100-250 (464)
84 TIGR01301 GPH_sucrose GPH fami 99.8 1E-16 2.2E-21 182.5 29.4 175 213-388 8-223 (477)
85 TIGR00792 gph sugar (Glycoside 99.8 9.9E-18 2.1E-22 191.4 21.0 170 217-386 7-197 (437)
86 COG2807 CynX Cyanate permease 99.8 1.9E-16 4.2E-21 167.7 28.2 160 217-378 20-181 (395)
87 KOG0253|consensus 99.8 4.3E-17 9.2E-22 171.2 22.5 173 213-388 82-255 (528)
88 PTZ00207 hypothetical protein; 99.8 3.1E-15 6.6E-20 173.8 37.7 154 230-387 47-209 (591)
89 TIGR02718 sider_RhtX_FptX side 99.7 2.5E-16 5.4E-21 177.4 26.7 168 213-382 5-183 (390)
90 PRK09584 tppB putative tripept 99.7 3.2E-15 6.9E-20 173.7 36.4 164 213-377 25-195 (500)
91 COG0738 FucP Fucose permease [ 99.7 1.5E-16 3.2E-21 171.0 21.0 164 214-378 18-205 (422)
92 TIGR00901 2A0125 AmpG-related 99.7 2.2E-16 4.7E-21 175.4 23.1 156 226-385 5-180 (356)
93 PF03825 Nuc_H_symport: Nucleo 99.7 3.7E-16 8E-21 175.5 25.1 173 213-387 6-183 (400)
94 TIGR00806 rfc RFC reduced fola 99.7 2.3E-15 5E-20 167.3 26.3 157 228-387 44-206 (511)
95 KOG0569|consensus 99.7 1.3E-15 2.7E-20 171.8 22.8 141 247-388 62-209 (485)
96 PF01306 LacY_symp: LacY proto 99.7 6E-16 1.3E-20 171.2 19.8 369 213-805 11-395 (412)
97 TIGR00805 oat sodium-independe 99.7 3.8E-16 8.3E-21 185.7 17.5 162 224-387 48-284 (633)
98 PRK15462 dipeptide/tripeptide 99.6 4.1E-13 8.8E-18 153.7 36.0 165 213-378 13-184 (493)
99 KOG0252|consensus 99.6 5.7E-15 1.2E-19 160.3 18.4 177 213-390 45-252 (538)
100 KOG0254|consensus 99.6 7.5E-14 1.6E-18 163.1 24.6 144 245-389 89-235 (513)
101 PF10185 Mesd: Chaperone for w 99.6 1.4E-15 3.1E-20 143.3 7.1 110 54-163 37-146 (158)
102 PF00083 Sugar_tr: Sugar (and 99.6 8.9E-18 1.9E-22 192.7 -11.5 144 245-389 46-197 (451)
103 PF13347 MFS_2: MFS/sugar tran 99.6 6.9E-14 1.5E-18 159.7 19.8 168 218-385 10-200 (428)
104 PRK09669 putative symporter Ya 99.6 1.8E-13 4E-18 156.9 22.5 169 217-385 17-206 (444)
105 TIGR00788 fbt folate/biopterin 99.6 9.8E-14 2.1E-18 160.0 19.6 169 214-386 31-211 (468)
106 PF11700 ATG22: Vacuole efflux 99.5 3E-12 6.5E-17 146.8 28.7 356 245-820 70-476 (477)
107 KOG0255|consensus 99.5 1.3E-13 2.9E-18 161.5 17.3 147 238-389 111-260 (521)
108 KOG4357|consensus 99.5 1.8E-14 3.9E-19 126.2 6.5 109 54-162 37-153 (164)
109 PRK10429 melibiose:sodium symp 99.5 1E-12 2.3E-17 152.0 23.0 170 216-385 13-203 (473)
110 PRK09848 glucuronide transport 99.5 6.5E-13 1.4E-17 152.6 20.5 137 217-353 16-173 (448)
111 KOG2325|consensus 99.5 2.5E-13 5.3E-18 152.2 12.4 178 213-390 38-236 (488)
112 KOG4686|consensus 99.4 1.5E-13 3.2E-18 139.9 6.3 128 231-358 65-199 (459)
113 PRK11462 putative transporter; 99.3 1.3E-10 2.9E-15 133.8 25.3 169 217-385 17-206 (460)
114 TIGR00880 2_A_01_02 Multidrug 99.3 8.7E-12 1.9E-16 117.4 12.6 134 251-385 4-140 (141)
115 COG2211 MelB Na+/melibiose sym 99.3 1E-10 2.2E-15 131.1 22.7 172 216-387 19-211 (467)
116 PRK15011 sugar efflux transpor 99.3 1.3E-10 2.8E-15 131.2 23.5 159 224-384 231-391 (393)
117 COG3104 PTR2 Dipeptide/tripept 99.3 5.8E-10 1.3E-14 124.0 27.5 167 213-380 25-203 (498)
118 PRK10642 proline/glycine betai 99.3 2.3E-10 5.1E-15 133.0 24.4 169 220-389 261-435 (490)
119 TIGR01299 synapt_SV2 synaptic 99.3 1.8E-10 3.9E-15 138.2 23.1 138 248-388 598-738 (742)
120 TIGR00889 2A0110 nucleoside tr 99.3 2E-10 4.4E-15 130.7 22.5 162 225-387 224-406 (418)
121 PRK09556 uhpT sugar phosphate 99.3 1.4E-10 3E-15 134.1 21.0 167 213-380 262-446 (467)
122 TIGR00899 2A0120 sugar efflux 99.3 2.8E-10 6E-15 126.9 22.5 154 225-379 215-370 (375)
123 TIGR01272 gluP glucose/galacto 99.3 4.4E-11 9.5E-16 130.5 14.5 85 294-378 6-108 (310)
124 PRK09528 lacY galactoside perm 99.3 2E-10 4.4E-15 130.7 20.3 144 241-385 258-405 (420)
125 KOG2816|consensus 99.3 5.9E-11 1.3E-15 134.9 15.6 133 254-392 71-208 (463)
126 PRK03699 putative transporter; 99.3 2.5E-10 5.3E-15 128.9 20.1 164 214-378 210-375 (394)
127 cd06174 MFS The Major Facilita 99.2 3.7E-10 8E-15 123.7 20.6 164 215-379 181-348 (352)
128 PRK05122 major facilitator sup 99.2 5.1E-10 1.1E-14 126.3 22.3 158 223-384 230-390 (399)
129 COG2270 Permeases of the major 99.2 3.4E-10 7.3E-15 123.3 19.4 166 590-805 257-424 (438)
130 PRK03545 putative arabinose tr 99.2 7.1E-10 1.5E-14 124.9 22.7 156 226-383 222-380 (390)
131 PRK11551 putative 3-hydroxyphe 99.2 5.5E-10 1.2E-14 126.3 21.5 159 223-382 234-395 (406)
132 PRK09874 drug efflux system pr 99.2 6.9E-10 1.5E-14 125.4 21.4 163 222-385 232-400 (408)
133 TIGR00890 2A0111 Oxalate/Forma 99.2 5.7E-10 1.2E-14 123.7 19.7 152 223-376 219-375 (377)
134 PRK10489 enterobactin exporter 99.2 1.2E-09 2.6E-14 124.3 21.5 161 227-388 241-404 (417)
135 TIGR00893 2A0114 d-galactonate 99.2 9.4E-10 2E-14 122.5 19.9 167 213-380 219-396 (399)
136 TIGR00897 2A0118 polyol permea 99.2 2.5E-09 5.5E-14 121.1 22.7 165 215-381 228-399 (402)
137 PRK03633 putative MFS family t 99.2 2.9E-09 6.3E-14 119.6 22.7 150 224-378 215-367 (381)
138 PRK09705 cynX putative cyanate 99.2 3.2E-09 6.9E-14 119.9 22.8 173 214-389 210-387 (393)
139 KOG2563|consensus 99.2 6.2E-10 1.3E-14 121.8 16.1 158 227-385 62-237 (480)
140 PRK12382 putative transporter; 99.2 2.1E-09 4.5E-14 121.1 21.0 157 223-383 230-389 (392)
141 TIGR00902 2A0127 phenyl propri 99.1 3.7E-09 8E-14 118.9 21.9 161 214-378 210-374 (382)
142 PRK09952 shikimate transporter 99.1 5.5E-09 1.2E-13 119.8 23.5 166 219-385 260-434 (438)
143 PF03209 PUCC: PUCC protein; 99.1 1.1E-08 2.3E-13 112.0 24.2 126 237-363 7-157 (403)
144 PRK03893 putative sialic acid 99.1 3.2E-09 6.8E-14 123.5 20.9 146 228-374 294-444 (496)
145 PRK11273 glpT sn-glycerol-3-ph 99.1 4.9E-09 1.1E-13 120.6 21.4 170 213-383 257-435 (452)
146 PF11700 ATG22: Vacuole efflux 99.1 9.1E-09 2E-13 118.3 23.0 170 215-385 287-469 (477)
147 TIGR00892 2A0113 monocarboxyla 99.1 8.6E-10 1.9E-14 127.0 14.3 161 216-377 248-415 (455)
148 TIGR00883 2A0106 metabolite-pr 99.1 3.6E-09 7.7E-14 118.1 18.8 160 214-373 224-391 (394)
149 TIGR00879 SP MFS transporter, 99.1 2.7E-09 5.9E-14 122.3 17.4 158 229-388 304-475 (481)
150 PRK11663 regulatory protein Uh 99.1 7.8E-09 1.7E-13 118.3 20.7 170 214-385 248-426 (434)
151 PF05977 MFS_3: Transmembrane 99.0 2E-08 4.4E-13 116.7 23.2 159 220-379 229-390 (524)
152 PRK10091 MFS transport protein 99.0 1.5E-08 3.2E-13 113.9 21.4 155 228-382 218-375 (382)
153 COG2814 AraJ Arabinose efflux 99.0 1.9E-08 4.1E-13 110.9 21.0 170 213-384 215-387 (394)
154 TIGR00891 2A0112 putative sial 99.0 8.4E-09 1.8E-13 115.9 18.7 143 225-367 254-400 (405)
155 TIGR00882 2A0105 oligosacchari 99.0 1.9E-08 4.2E-13 113.5 21.1 156 225-381 231-393 (396)
156 COG2223 NarK Nitrate/nitrite t 99.0 9.5E-09 2.1E-13 112.1 16.9 170 212-384 221-402 (417)
157 PRK11128 putative 3-phenylprop 99.0 4.1E-08 8.8E-13 110.4 22.1 158 217-377 213-373 (382)
158 PRK15402 multidrug efflux syst 99.0 5E-08 1.1E-12 110.5 22.9 159 226-385 232-397 (406)
159 COG2271 UhpC Sugar phosphate p 99.0 8.2E-09 1.8E-13 112.4 15.4 176 207-383 250-434 (448)
160 PRK11010 ampG muropeptide tran 99.0 7.8E-08 1.7E-12 111.9 24.4 162 220-382 233-402 (491)
161 COG2270 Permeases of the major 99.0 3.1E-08 6.7E-13 108.2 18.9 169 217-386 260-431 (438)
162 PRK10504 putative transporter; 99.0 7.2E-08 1.6E-12 111.5 23.4 143 216-358 268-416 (471)
163 TIGR00712 glpT glycerol-3-phos 99.0 2.4E-08 5.3E-13 114.4 19.1 171 216-387 258-437 (438)
164 PRK15075 citrate-proton sympor 98.9 5.1E-08 1.1E-12 111.6 21.6 141 220-361 249-397 (434)
165 PLN00028 nitrate transmembrane 98.9 1.9E-08 4.1E-13 116.6 17.9 153 226-380 269-430 (476)
166 TIGR00900 2A0121 H+ Antiporter 98.9 5.1E-08 1.1E-12 107.7 19.5 129 230-358 232-364 (365)
167 PRK10406 alpha-ketoglutarate t 98.9 1.2E-07 2.5E-12 108.6 22.5 158 222-380 256-421 (432)
168 TIGR02718 sider_RhtX_FptX side 98.9 1.2E-07 2.6E-12 106.8 22.0 160 217-378 216-386 (390)
169 PF03137 OATP: Organic Anion T 98.9 2.4E-10 5.1E-15 133.1 -0.1 172 215-388 9-254 (539)
170 TIGR01272 gluP glucose/galacto 98.9 1.1E-07 2.5E-12 103.7 20.5 154 215-371 146-303 (310)
171 PRK10077 xylE D-xylose transpo 98.9 7.6E-08 1.6E-12 111.4 19.9 157 230-388 292-462 (479)
172 PRK08633 2-acyl-glycerophospho 98.9 6.1E-08 1.3E-12 124.6 20.8 159 218-376 241-403 (1146)
173 PRK14995 methyl viologen resis 98.9 2.6E-07 5.7E-12 107.7 23.4 141 216-356 266-412 (495)
174 PRK12307 putative sialic acid 98.9 1.5E-07 3.1E-12 107.3 20.8 138 228-367 250-392 (426)
175 TIGR00792 gph sugar (Glycoside 98.8 6.6E-08 1.4E-12 110.4 17.7 141 217-358 230-381 (437)
176 PRK10213 nepI ribonucleoside t 98.8 3.1E-07 6.8E-12 103.7 22.6 149 229-378 236-386 (394)
177 TIGR02332 HpaX 4-hydroxyphenyl 98.8 4.8E-08 1E-12 111.0 16.0 160 213-372 246-410 (412)
178 PRK06814 acylglycerophosphoeth 98.8 7.4E-08 1.6E-12 123.8 19.6 165 214-378 230-417 (1140)
179 PRK11902 ampG muropeptide tran 98.8 4.3E-07 9.3E-12 102.8 22.9 145 232-379 232-386 (402)
180 TIGR00881 2A0104 phosphoglycer 98.8 4.3E-08 9.2E-13 108.8 14.3 152 213-365 220-379 (379)
181 PRK15034 nitrate/nitrite trans 98.8 3E-07 6.5E-12 104.7 21.0 167 213-384 256-455 (462)
182 KOG2504|consensus 98.8 4.6E-08 9.9E-13 113.2 13.9 166 213-379 302-472 (509)
183 TIGR00894 2A0114euk Na(+)-depe 98.8 1.9E-07 4.1E-12 107.9 19.1 168 213-380 265-447 (465)
184 PRK10054 putative transporter; 98.8 1.9E-07 4E-12 105.6 18.5 140 240-381 239-382 (395)
185 KOG3626|consensus 98.8 5.3E-08 1.2E-12 113.9 14.0 175 213-389 101-348 (735)
186 TIGR00895 2A0115 benzoate tran 98.8 1.8E-07 3.9E-12 104.6 18.0 134 220-354 261-397 (398)
187 PF05631 DUF791: Protein of un 98.8 1.6E-06 3.5E-11 93.7 23.6 169 217-387 42-220 (354)
188 TIGR00896 CynX cyanate transpo 98.8 3E-07 6.5E-12 102.1 18.9 143 218-362 206-353 (355)
189 PRK10133 L-fucose transporter; 98.7 4.6E-07 1E-11 103.9 20.1 152 223-377 272-427 (438)
190 KOG0637|consensus 98.7 5.9E-08 1.3E-12 106.5 11.7 140 213-353 36-201 (498)
191 PRK11195 lysophospholipid tran 98.7 7.9E-07 1.7E-11 100.4 21.4 148 229-379 225-376 (393)
192 TIGR00898 2A0119 cation transp 98.7 4.2E-07 9.1E-12 106.1 19.8 142 240-388 353-499 (505)
193 TIGR00710 efflux_Bcr_CflA drug 98.7 8.4E-07 1.8E-11 99.1 21.3 141 224-366 221-369 (385)
194 TIGR00711 efflux_EmrB drug res 98.7 4.2E-07 9.1E-12 105.2 19.4 143 215-357 261-410 (485)
195 PF03092 BT1: BT1 family; Int 98.7 6E-07 1.3E-11 102.6 20.0 151 233-385 13-177 (433)
196 COG2807 CynX Cyanate permease 98.7 1.5E-06 3.2E-11 93.3 20.8 168 213-382 212-384 (395)
197 PRK09848 glucuronide transport 98.7 4.3E-07 9.3E-12 104.4 17.6 143 216-358 235-389 (448)
198 PRK10473 multidrug efflux syst 98.7 1.3E-06 2.8E-11 98.4 21.1 141 228-372 222-363 (392)
199 PRK11646 multidrug resistance 98.7 7.7E-07 1.7E-11 100.8 18.9 149 229-378 228-383 (400)
200 TIGR00887 2A0109 phosphate:H+ 98.7 4E-07 8.7E-12 106.3 16.6 135 253-388 343-493 (502)
201 KOG0569|consensus 98.6 7.5E-07 1.6E-11 101.2 17.7 152 238-391 298-462 (485)
202 PF01306 LacY_symp: LacY proto 98.6 2.6E-06 5.6E-11 95.1 21.3 164 225-389 236-406 (412)
203 TIGR00903 2A0129 major facilit 98.6 2.4E-06 5.2E-11 95.6 20.8 159 213-379 196-361 (368)
204 PF13347 MFS_2: MFS/sugar tran 98.6 1.2E-06 2.6E-11 100.1 17.6 145 213-358 229-385 (428)
205 PF03825 Nuc_H_symport: Nucleo 98.6 6.8E-06 1.5E-10 92.8 22.5 170 215-385 213-397 (400)
206 PRK11102 bicyclomycin/multidru 98.5 1.1E-05 2.4E-10 90.1 21.5 134 220-353 205-345 (377)
207 KOG4686|consensus 98.5 3.8E-06 8.2E-11 86.6 15.8 149 213-363 268-420 (459)
208 PF01770 Folate_carrier: Reduc 98.5 2.4E-05 5.1E-10 87.0 23.5 160 228-388 22-186 (412)
209 KOG3764|consensus 98.5 1.9E-07 4.1E-12 100.8 6.1 165 214-379 275-450 (464)
210 TIGR00901 2A0125 AmpG-related 98.5 3.9E-06 8.5E-11 93.1 16.7 124 216-340 216-354 (356)
211 PRK11043 putative transporter; 98.4 1.7E-05 3.8E-10 89.5 22.0 130 227-357 221-357 (401)
212 TIGR00885 fucP L-fucose:H+ sym 98.4 9.3E-06 2E-10 92.3 19.7 157 217-374 240-403 (410)
213 KOG2532|consensus 98.4 1.8E-06 4E-11 98.8 13.2 172 211-382 260-446 (466)
214 COG0477 ProP Permeases of the 98.4 1.5E-05 3.2E-10 84.2 19.4 151 223-374 16-176 (338)
215 PF07690 MFS_1: Major Facilita 98.4 5E-06 1.1E-10 91.4 15.4 130 219-348 216-352 (352)
216 PF06813 Nodulin-like: Nodulin 98.4 5E-05 1.1E-09 79.5 21.4 131 226-357 18-157 (250)
217 PRK09669 putative symporter Ya 98.4 1.5E-05 3.3E-10 91.4 19.1 115 244-358 263-389 (444)
218 PRK10429 melibiose:sodium symp 98.3 9.1E-06 2E-10 94.2 16.8 141 217-358 239-394 (473)
219 PRK11652 emrD multidrug resist 98.3 4.8E-05 1E-09 85.7 21.5 133 225-357 223-360 (394)
220 TIGR00924 yjdL_sub1_fam amino 98.3 3.3E-05 7.2E-10 89.5 19.8 162 222-384 285-469 (475)
221 KOG0253|consensus 98.3 3.6E-06 7.8E-11 89.9 10.5 126 254-382 390-518 (528)
222 KOG3762|consensus 98.3 6E-06 1.3E-10 92.5 12.4 163 214-378 376-542 (618)
223 TIGR00926 2A1704 Peptide:H+ sy 98.2 3.4E-05 7.4E-10 92.0 18.7 153 229-381 7-180 (654)
224 COG0738 FucP Fucose permease [ 98.2 7.1E-05 1.5E-09 81.8 17.8 161 213-375 240-401 (422)
225 TIGR00886 2A0108 nitrite extru 98.1 1.9E-05 4.2E-10 87.6 13.0 126 218-343 234-365 (366)
226 COG2211 MelB Na+/melibiose sym 98.1 6.1E-05 1.3E-09 85.1 16.0 145 214-358 241-397 (467)
227 PRK15403 multidrug efflux syst 98.1 0.0002 4.3E-09 81.5 20.6 155 219-375 228-389 (413)
228 PF12832 MFS_1_like: MFS_1 lik 98.1 4.1E-05 9E-10 64.9 10.3 70 214-284 5-74 (77)
229 PRK11462 putative transporter; 98.0 0.0004 8.6E-09 80.2 20.6 114 244-357 262-387 (460)
230 TIGR01301 GPH_sucrose GPH fami 98.0 0.00031 6.8E-09 80.7 19.4 177 212-388 261-476 (477)
231 PRK15462 dipeptide/tripeptide 98.0 1.2E-05 2.5E-10 92.8 7.2 169 587-805 11-184 (493)
232 PRK09584 tppB putative tripept 98.0 0.00025 5.5E-09 82.7 18.5 135 247-381 318-477 (500)
233 TIGR00788 fbt folate/biopterin 97.9 7.7E-05 1.7E-09 86.3 12.9 121 238-358 281-414 (468)
234 PF03209 PUCC: PUCC protein; 97.9 0.0014 3.1E-08 72.3 20.6 164 215-378 214-393 (403)
235 PRK10207 dipeptide/tripeptide 97.8 3.7E-05 7.9E-10 89.4 8.3 169 587-805 16-189 (489)
236 KOG2533|consensus 97.7 0.00017 3.7E-09 83.1 10.6 157 213-370 277-443 (495)
237 PF06779 DUF1228: Protein of u 97.7 0.00041 8.9E-09 59.5 10.0 76 225-301 8-83 (85)
238 PF06963 FPN1: Ferroportin1 (F 97.6 0.012 2.7E-07 66.7 23.9 170 213-383 6-200 (432)
239 PF05978 UNC-93: Ion channel r 97.6 0.0028 6.1E-08 61.5 16.0 107 249-356 41-150 (156)
240 KOG3762|consensus 97.5 0.0004 8.7E-09 78.3 10.5 73 222-295 24-97 (618)
241 KOG0254|consensus 97.5 0.0015 3.3E-08 76.6 15.1 164 223-390 309-490 (513)
242 PF00083 Sugar_tr: Sugar (and 97.4 8.7E-07 1.9E-11 101.7 -12.8 149 239-390 282-443 (451)
243 PF06609 TRI12: Fungal trichot 97.4 0.0033 7.1E-08 73.8 16.1 139 216-354 317-464 (599)
244 TIGR00880 2_A_01_02 Multidrug 97.4 0.00018 3.8E-09 67.2 4.7 130 625-805 2-133 (141)
245 TIGR00805 oat sodium-independe 97.4 0.00037 8.1E-09 83.6 8.5 67 603-669 50-118 (633)
246 KOG1330|consensus 97.3 8.4E-05 1.8E-09 82.4 1.9 151 612-812 59-211 (493)
247 TIGR00769 AAA ADP/ATP carrier 97.2 0.043 9.2E-07 63.1 22.5 121 236-356 29-190 (472)
248 KOG0252|consensus 97.2 0.00013 2.9E-09 80.7 1.9 130 259-390 362-504 (538)
249 TIGR00806 rfc RFC reduced fola 97.2 0.00044 9.6E-09 78.2 6.0 154 606-810 46-203 (511)
250 PRK03612 spermidine synthase; 97.2 0.031 6.8E-07 65.3 20.8 161 217-378 22-192 (521)
251 KOG0255|consensus 97.1 0.026 5.7E-07 66.2 20.4 134 256-391 361-500 (521)
252 KOG2615|consensus 97.0 0.0034 7.4E-08 68.2 9.9 155 215-369 267-426 (451)
253 PF02487 CLN3: CLN3 protein; 96.9 0.046 1E-06 61.1 17.8 137 248-387 62-199 (402)
254 COG3104 PTR2 Dipeptide/tripept 96.5 0.0011 2.4E-08 74.7 2.0 169 588-805 24-201 (498)
255 PF00854 PTR2: POT family; In 96.2 0.024 5.1E-07 63.5 10.0 103 276-379 2-119 (372)
256 KOG2816|consensus 96.1 0.045 9.8E-07 62.8 12.1 126 233-358 265-393 (463)
257 KOG1237|consensus 96.1 0.13 2.8E-06 60.7 16.1 162 217-379 45-241 (571)
258 PTZ00207 hypothetical protein; 96.1 0.061 1.3E-06 63.5 13.2 133 250-383 396-552 (591)
259 KOG2325|consensus 95.9 0.024 5.1E-07 64.7 8.3 84 583-666 32-119 (488)
260 KOG3098|consensus 95.5 0.21 4.6E-06 56.9 14.1 101 251-352 56-159 (461)
261 KOG2563|consensus 95.1 0.052 1.1E-06 60.6 7.3 148 240-387 296-454 (480)
262 KOG3574|consensus 95.0 1.9 4.1E-05 47.5 18.4 136 213-354 35-188 (510)
263 KOG4332|consensus 94.7 0.03 6.4E-07 58.0 3.7 104 224-329 52-157 (454)
264 TIGR00926 2A1704 Peptide:H+ sy 94.5 0.02 4.4E-07 68.6 2.5 157 603-805 5-177 (654)
265 PF03092 BT1: BT1 family; Int 94.1 0.42 9.2E-06 54.7 12.1 145 242-387 252-416 (433)
266 PF02487 CLN3: CLN3 protein; 93.4 0.26 5.7E-06 55.2 8.4 108 244-355 280-395 (402)
267 KOG3810|consensus 92.5 0.5 1.1E-05 51.2 8.5 128 230-357 25-156 (433)
268 PF03137 OATP: Organic Anion T 92.2 0.041 8.8E-07 64.7 0.0 145 214-358 310-515 (539)
269 PF06813 Nodulin-like: Nodulin 92.1 0.19 4.1E-06 52.8 4.9 149 605-806 21-178 (250)
270 TIGR00939 2a57 Equilibrative N 90.7 11 0.00023 43.3 17.6 51 297-350 105-156 (437)
271 KOG3098|consensus 89.9 18 0.00039 41.6 18.2 134 217-350 248-407 (461)
272 PF13000 Acatn: Acetyl-coenzym 89.7 3.8 8.3E-05 46.9 12.4 66 213-280 4-75 (544)
273 PF03219 TLC: TLC ATP/ADP tran 89.4 16 0.00034 42.5 17.5 114 243-356 56-205 (491)
274 PF06963 FPN1: Ferroportin1 (F 88.7 16 0.00035 41.7 16.7 122 228-350 277-411 (432)
275 PF12832 MFS_1_like: MFS_1 lik 87.2 0.23 5E-06 42.0 0.7 59 592-651 7-67 (77)
276 PF05631 DUF791: Protein of un 86.7 2.2 4.8E-05 46.8 7.9 76 605-681 53-130 (354)
277 COG3202 ATP/ADP translocase [E 84.6 47 0.001 38.2 17.2 122 236-357 49-210 (509)
278 KOG3626|consensus 83.7 3.9 8.4E-05 49.2 8.7 67 603-669 114-182 (735)
279 COG4262 Predicted spermidine s 82.5 47 0.001 36.4 15.2 104 218-324 19-132 (508)
280 KOG3097|consensus 82.4 14 0.0003 40.2 11.2 73 253-326 66-139 (390)
281 KOG0637|consensus 81.6 3.8 8.2E-05 46.3 7.1 129 249-377 336-490 (498)
282 TIGR00939 2a57 Equilibrative N 78.3 12 0.00026 43.0 10.1 106 248-354 310-431 (437)
283 KOG3880|consensus 77.6 8.1 0.00018 41.5 7.6 131 255-388 72-204 (409)
284 PRK03612 spermidine synthase; 76.9 3.3 7.2E-05 48.6 5.2 54 589-642 18-71 (521)
285 PF00854 PTR2: POT family; In 71.5 1.2 2.5E-05 49.9 -0.4 47 757-805 72-118 (372)
286 PF06779 DUF1228: Protein of u 69.8 1.8 3.9E-05 37.3 0.5 74 600-674 7-82 (85)
287 KOG2601|consensus 67.8 80 0.0017 35.2 12.4 160 216-376 34-219 (503)
288 PF01770 Folate_carrier: Reduc 55.4 1.1E+02 0.0025 34.6 11.5 79 246-324 286-367 (412)
289 PF01733 Nucleoside_tran: Nucl 55.4 4.7 0.0001 43.9 0.6 104 250-353 187-306 (309)
290 PF07760 DUF1616: Protein of u 54.9 2.1E+02 0.0046 30.7 13.2 57 301-358 22-80 (287)
291 PRK10263 DNA translocase FtsK; 54.4 77 0.0017 40.8 10.8 20 254-273 61-80 (1355)
292 TIGR00769 AAA ADP/ATP carrier 51.2 4.5E+02 0.0097 30.5 21.9 60 315-375 284-346 (472)
293 KOG1479|consensus 47.6 3.8E+02 0.0083 30.3 13.9 28 298-325 117-145 (406)
294 PF07672 MFS_Mycoplasma: Mycop 47.2 65 0.0014 34.0 7.3 97 250-346 146-254 (267)
295 COG5336 Uncharacterized protei 44.5 91 0.002 28.0 6.6 28 252-279 49-77 (116)
296 PF13000 Acatn: Acetyl-coenzym 41.4 1.9E+02 0.0042 33.6 10.5 57 213-270 282-338 (544)
297 TIGR01666 YCCS hypothetical me 36.1 2E+02 0.0043 35.2 10.2 51 263-313 41-96 (704)
298 PF04226 Transgly_assoc: Trans 35.4 31 0.00067 26.3 2.1 35 770-805 4-38 (48)
299 KOG3880|consensus 33.9 1.6E+02 0.0034 32.1 7.7 69 284-352 328-399 (409)
300 PF04346 EutH: Ethanolamine ut 33.2 7.1E+02 0.015 27.6 13.1 123 247-376 49-180 (354)
301 PF13782 SpoVAB: Stage V sporu 33.2 2E+02 0.0042 26.2 7.1 52 298-349 48-105 (110)
302 PF12805 FUSC-like: FUSC-like 32.3 2E+02 0.0043 30.8 8.7 32 281-312 5-37 (284)
303 TIGR01667 YCCS_YHJK integral m 30.5 2.5E+02 0.0054 34.4 9.9 52 262-313 40-96 (701)
304 COG0477 ProP Permeases of the 30.2 90 0.0019 31.9 5.6 41 757-797 131-172 (338)
305 KOG4332|consensus 29.3 4.3E+02 0.0093 28.3 9.8 129 247-379 284-427 (454)
306 PF03219 TLC: TLC ATP/ADP tran 29.0 9.8E+02 0.021 27.9 21.9 61 316-377 301-364 (491)
307 COG5336 Uncharacterized protei 28.2 73 0.0016 28.6 3.5 47 758-804 43-89 (116)
308 KOG1479|consensus 26.8 2.2E+02 0.0049 32.1 7.9 104 247-352 284-400 (406)
309 TIGR00927 2A1904 K+-dependent 26.5 8.9E+02 0.019 30.6 13.2 49 227-277 950-998 (1096)
310 KOG4830|consensus 23.8 1.5E+02 0.0033 31.3 5.4 62 216-278 24-94 (412)
311 TIGR03173 pbuX xanthine permea 22.6 1.1E+03 0.024 26.4 13.9 95 235-329 18-113 (406)
312 TIGR00844 c_cpa1 na(+)/h(+) an 21.0 8.8E+02 0.019 30.1 11.9 33 339-372 109-141 (810)
313 KOG1237|consensus 20.8 2.1E+02 0.0045 34.1 6.7 47 757-805 194-240 (571)
314 TIGR02230 ATPase_gene1 F0F1-AT 20.6 4.7E+02 0.01 23.3 7.2 26 260-285 57-83 (100)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.5e-27 Score=256.46 Aligned_cols=360 Identities=17% Similarity=0.166 Sum_probs=280.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.++.|.....-....+.+|... +++|+|..+.|+..++|.++..++.|+...+.||+.||++++..+.++.++++++
T Consensus 17 aLa~~~F~igttEfv~~gLLp~iA-~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 17 ALALAAFAIGTTEFVPVGLLPPIA-ADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHHHHHHHhHHHHHHhchHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 566777888888888888888744 5699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
++++|++.++++|++.|+..|. ++...++..++.|+ |.|++++...+..++.++|.++|.++.+.+ |||+.|++.+
T Consensus 96 alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR~~F~~ia 174 (394)
T COG2814 96 ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRATFLAIA 174 (394)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHHHHHHHHH
Confidence 9999999999999999999996 89999999999987 467899999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHHHHhh
Q psy3157 370 ALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKF 449 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 449 (822)
++.++..+..+..+| +++..+......+
T Consensus 175 ~l~ll~~~~~~~~lP--~~~~~~~~~~~~~-------------------------------------------------- 202 (394)
T COG2814 175 VLALLALLLLWKLLP--PSEISGSLPGPLR-------------------------------------------------- 202 (394)
T ss_pred HHHHHHHHHHHHhCC--CccCCCCCCcchh--------------------------------------------------
Confidence 999999988888888 1111110000000
Q ss_pred hcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcccCCC
Q psy3157 450 KEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESS 529 (822)
Q Consensus 450 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (822)
T Consensus 203 -------------------------------------------------------------------------------- 202 (394)
T COG2814 203 -------------------------------------------------------------------------------- 202 (394)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhhhhhH
Q psy3157 530 DVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYI 609 (822)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 609 (822)
++...+.....+..++..++...+.+..+++..
T Consensus 203 -----------------------------------------------~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~ 235 (394)
T COG2814 203 -----------------------------------------------TLLRLLRRPGVLLGLLATFLFMTGHFALYTYIR 235 (394)
T ss_pred -----------------------------------------------HHHHHhcCchHHHHHHHHHHHHcchhhhHHhHH
Confidence 000000011236677777788888888899999
Q ss_pred HhhhcccCCCccceeeEEehhhhhccccceeee-ecccCccchhHHHHHHHHHHHHHHHhhhHHH-HHHHHHHhhhcccc
Q psy3157 610 SVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-IDSRNSYSSLYYSFILLTVSILALYVSVNLY-LFVLLLVSCKKFKE 687 (822)
Q Consensus 610 ~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~-~~~~~~~~~~~f~~ 687 (822)
+++++..|+++...++++-..|+++++|+++.| +.+++.++.+.....++++.++.+.+..+.. ...+...+ ..|..
T Consensus 236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~-wg~a~ 314 (394)
T COG2814 236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALLLLALALLALTFTGASPALALALLFL-WGFAF 314 (394)
T ss_pred HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH-HHHHh
Confidence 999999999999999999999999999999999 6666666666666666666666655544333 33332222 32221
Q ss_pred CCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHhh
Q psy3157 688 GEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTS 767 (822)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~ 767 (822)
....+.|- +... +..++... .+.+++....+
T Consensus 315 ~~~~~~~~-----------------------------------------------~~~a-~~~p~~~~-~a~sl~~aa~n 345 (394)
T COG2814 315 SPALQGLQ-----------------------------------------------TRLA-RLAPDAAD-LAGSLNVAAFN 345 (394)
T ss_pred hhhhhHHH-----------------------------------------------HHhc-ccCCCchH-HHHHHHHHHHH
Confidence 11111110 0111 12334444 59999999999
Q ss_pred hhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 768 IAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 768 lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
+|..+|..++|.++|+.| |....++++++.++++++
T Consensus 346 lgia~GA~lGG~v~~~~g--~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 346 LGIALGAALGGLVLDALG--YAATGWVGAALLLLALLL 381 (394)
T ss_pred HHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHH
Confidence 999999999999999954 777788999988888776
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.5e-25 Score=250.44 Aligned_cols=170 Identities=14% Similarity=0.185 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.++.++.........+.+|. +.+++|.+..+.|++.+.+.+++.++++++|+++||+|||+++..+.++.++++++++
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 92 (390)
T PRK03545 14 LALAAFIFNTTEFVPVGLLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSA 92 (390)
T ss_pred HHHHHHHHHhHHHHHHcchHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence 344444444444445555665 5557999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++++.++++|++.|++.+. .+...+++.|++|+ |++++|++..+.++|.++||++++.+.+.. |||++|++.++
T Consensus 93 ~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~ 171 (390)
T PRK03545 93 LAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFLAIGG 171 (390)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHHHHHH
Confidence 999999999999999999986 78888999999986 456799999999999999999999998887 99999999998
Q ss_pred HHHHHHHHHhhhccc
Q psy3157 371 LFVVNFVYTYWVVTD 385 (822)
Q Consensus 371 ~~li~~ll~~~~~~e 385 (822)
+.++..++.+..+|+
T Consensus 172 ~~~l~~~~~~~~~~~ 186 (390)
T PRK03545 172 GALITLLLLIKLLPL 186 (390)
T ss_pred HHHHHHHHHHHhCCC
Confidence 887766655555554
No 3
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.94 E-value=1.6e-24 Score=243.31 Aligned_cols=172 Identities=19% Similarity=0.240 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..+..........+.+|. +.+++|++..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 4566667777777777888876 455699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+++++++.+++.|++.|++.+. .+...+++.+++|++ .++++++..+..+|..+||++++++.+.. +||++|++.+
T Consensus 86 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~ 164 (382)
T PRK10091 86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRYTFLLIA 164 (382)
T ss_pred HHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHHHHHHHH
Confidence 9999999999999999999986 677788899999874 45689888999999999999999998876 9999999998
Q ss_pred HHHHHHHHHHhhhcccC
Q psy3157 370 ALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~ 386 (822)
++.++..+..++.+|+.
T Consensus 165 ~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 165 VFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 88777666555556653
No 4
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.94 E-value=1.3e-24 Score=244.96 Aligned_cols=149 Identities=15% Similarity=0.085 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q psy3157 226 SLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVR 305 (822)
Q Consensus 226 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r 305 (822)
....+.+|. +++++|+|..+.|++.+.+.+++.++++++|+++||+|||+++..+.++++++.++++++++++.++++|
T Consensus 26 ~~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r 104 (393)
T PRK09705 26 TSVGPLLPQ-LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA 104 (393)
T ss_pred hccchhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence 445566665 5567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q psy3157 306 ILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVN 375 (822)
Q Consensus 306 ~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~ 375 (822)
+++|++.+. .+....++.+++|+ +++++|++..+..+|..+|+.+++++.+...+||+.+.+.++..++.
T Consensus 105 ~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 999999986 77778899999975 45678999999999999999999998877558999887766554443
No 5
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=1.6e-24 Score=247.64 Aligned_cols=169 Identities=17% Similarity=0.198 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
..++..+......+.+|.+.+ ++|++..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 109 (434)
T PRK11663 31 GYALFYFTRKSFNAAMPEMLA-DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS 109 (434)
T ss_pred HHHHHHHhhhhHHHhhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh
Confidence 333333333344555665554 5999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
+++.+++.|++.|++.|. .+...+++.+++|++ ++++|+++.+.++|.+++|++++++.+.. |||+.|++.+++.+
T Consensus 110 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~~f~~~~i~~~ 188 (434)
T PRK11663 110 SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRYGMMIAGIIAI 188 (434)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHH
Confidence 999999999999999886 788899999999864 55689999999999999999999999887 99999999888776
Q ss_pred HHHHHHhhhcccCC
Q psy3157 374 VNFVYTYWVVTDVK 387 (822)
Q Consensus 374 i~~ll~~~~~~e~~ 387 (822)
+..++..+++++++
T Consensus 189 ~~~~~~~~~~~~~p 202 (434)
T PRK11663 189 VVGLFLCWRLRDKP 202 (434)
T ss_pred HHHHHHHHHcCCCH
Confidence 66555555666644
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1.9e-24 Score=245.29 Aligned_cols=175 Identities=13% Similarity=0.130 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
++++.++++...........| .+++++|++..+.|++.+++.+++.+++++.|+++||+|||+++.+++++++++.+++
T Consensus 12 ~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 90 (412)
T TIGR02332 12 FLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT 90 (412)
T ss_pred HHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444 5677899999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccchHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHY-----ENGFFYI 364 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~-----~~gw~~~ 364 (822)
+++++++.+++.|++.|++.|. .+....++.|++|++ ++++++++.+..+|.++||++++++.+. ..|||++
T Consensus 91 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~ 170 (412)
T TIGR02332 91 MFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWL 170 (412)
T ss_pred HHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHH
Confidence 9999999999999999999986 788888999999974 5568999999999999999999988742 1389999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 365 CCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 365 f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
|++.+++.++..++.++++||+++
T Consensus 171 f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 171 FLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHhhccCCCcc
Confidence 999888887777766777787764
No 7
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=2.2e-24 Score=243.95 Aligned_cols=173 Identities=15% Similarity=0.014 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
++.+..+++.+.........|. +.+++|.+..+.|++.+.+.++..++++++|+++||+|||+++.++.++.+++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 97 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPR-MAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT 97 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 3444555555555555555554 445699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.++++++.+++.|++.|++.+. .+...+++.|++|+ |++++++++.+..+|..++|.+++.+.+.. +|++.|++.+
T Consensus 98 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 176 (406)
T PRK11551 98 AQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWRHIFYVGG 176 (406)
T ss_pred HHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHHHHH
Confidence 9999999999999999999986 78889999999986 455689999999999999999998887776 9999999988
Q ss_pred HHHHHHHHHHhhhcccCC
Q psy3157 370 ALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~~ 387 (822)
++.++..++..+++||++
T Consensus 177 ~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 177 VGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHhCCCCh
Confidence 776666665556667654
No 8
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.1e-25 Score=238.49 Aligned_cols=373 Identities=16% Similarity=0.189 Sum_probs=271.2
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch
Q psy3157 235 YLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT 314 (822)
Q Consensus 235 ~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~ 314 (822)
++.++.++|.+|+|++.+++.+.+.++..+.|.++||.+.|..+.++++++++.+++++++++++.+.++.++.|++.|.
T Consensus 54 ~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~ 133 (448)
T COG2271 54 ALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGM 133 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 45567889999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred -hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHH--HHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy3157 315 -QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIG--GHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 315 -~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~--g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~ 389 (822)
+|++...++.|+++++| ..++++.+-++|+.+.|++. +++..+. +||..|++.+++.++..++.++..+++|++
T Consensus 134 Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 134 GWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred CCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999998655 48999999999999999999 8888886 999999999999999998888888887765
Q ss_pred ccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccccccchhhh
Q psy3157 390 PTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKFKEGEEKPKWAKKDLSFYNDA 469 (822)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 469 (822)
..-.+.++.+.+.
T Consensus 213 ~GLP~ie~~~~d~------------------------------------------------------------------- 225 (448)
T COG2271 213 EGLPPIEEYRGDP------------------------------------------------------------------- 225 (448)
T ss_pred cCCCCHHHhhcCc-------------------------------------------------------------------
Confidence 5433211111000
Q ss_pred hhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcccCCCCCCcchhhhhcccCCCCCCC
Q psy3157 470 DLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESSDVNPLLQEEIDMDMGNDRPR 549 (822)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (822)
.+. .+
T Consensus 226 -~e~------------------------------~~-------------------------------------------- 230 (448)
T COG2271 226 -LEI------------------------------YE-------------------------------------------- 230 (448)
T ss_pred -hhh------------------------------hh--------------------------------------------
Confidence 000 00
Q ss_pred ChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEeh
Q psy3157 550 DIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSF 629 (822)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si 629 (822)
++... +.++. ...+.+++. ..+..|.+.+..++....-+++..|.|.|+.+..|++..+++...++
T Consensus 231 ---~~~~~-----~~ls~-~~i~~~YVL-----~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~l 296 (448)
T COG2271 231 ---EEKEN-----EGLTA-WQIFVKYVL-----KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISL 296 (448)
T ss_pred ---hhccC-----CCccH-HHHHHHHHH-----cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHH
Confidence 00000 00000 011222221 22334888888888888899999999999999999999999999999
Q ss_pred hhhhccccceeee-eccc---Cccchh-HHHHHHHHHHHHHHHhhhHH--HHHHHHHHhhhccccCCCCccccccccccc
Q psy3157 630 QGLVGSFSNVLIH-IDSR---NSYSSL-YYSFILLTVSILALYVSVNL--YLFVLLLVSCKKFKEGEEKPKWAKKDLSFY 702 (822)
Q Consensus 630 ~gi~~~v~~i~~G-~~~~---~~~~~l-~~~~~l~~~~~~~l~~~~~~--~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 702 (822)
.=++++.|.+++| +.++ +++... ++..+++.++++.+.+.++. ++..+++...+++..| |
T Consensus 297 fE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyG---P---------- 363 (448)
T COG2271 297 FEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYG---P---------- 363 (448)
T ss_pred HHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhh---H----------
Confidence 9999999999999 3332 333333 55555556666666665543 5555555555544433 1
Q ss_pred cccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHhhh-hhhhccchhhhHh
Q psy3157 703 NDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSI-AKVITPLLGGIIS 781 (822)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~l-g~~igP~i~G~i~ 781 (822)
. .|... .+ --+..++.+| ++.|+.+.+..+ |.+.+....|++.
T Consensus 364 --q---mLiGl--------------~a------------~e~~pK~AaG-----tA~Gf~Glf~Yl~Ga~~a~~~~g~i~ 407 (448)
T COG2271 364 --Q---MLIGL--------------AA------------AEFVPKKAAG-----TATGFVGLFAYLIGAALAGLPLGYIA 407 (448)
T ss_pred --H---HHHHH--------------HH------------hccccHhhcc-----chhchhhhHHHHhhHHhcCCcceeeE
Confidence 0 11111 00 0133445567 799999999999 8899999999999
Q ss_pred hhccCcccchhhHHHHHHHHHHhhheehhhhhhH
Q psy3157 782 DWVQDNYKVTFLVAFLFGAVGVVTTRVVMMKSRR 815 (822)
Q Consensus 782 d~~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 815 (822)
|.+| |...|++..+..++++++.......+++
T Consensus 408 d~~g--W~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 408 DTWG--WDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred ecCC--CcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 9865 6666766666666666654334443333
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.93 E-value=2.4e-24 Score=256.57 Aligned_cols=175 Identities=15% Similarity=0.171 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
+++++.+.+.+....+...+|. +.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++++++.+++
T Consensus 171 i~~l~~~~~g~d~~~is~ilp~-i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~ 249 (742)
T TIGR01299 171 VLGLALMADGVEVFVVGFVLPS-AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS 249 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3444444454444555555554 555699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc-----------
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYE----------- 358 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~----------- 358 (822)
+++++++.++++|++.|++.|+ .+...++++|++|++.| .++++.+++.+|.++++.+++.+....
T Consensus 250 afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~ 329 (742)
T TIGR01299 250 SFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQ 329 (742)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccc
Confidence 9999999999999999999986 89999999999997554 588889999999999999888776532
Q ss_pred -cchHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy3157 359 -NGFFYICCMTSALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 359 -~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~ 389 (822)
.+||+.+++.++..++. ++..+++||+|+.
T Consensus 330 ~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrw 360 (742)
T TIGR01299 330 FHSWRVFVIVCAFPCVFA-IGALTFMPESPRF 360 (742)
T ss_pred cccHHHHHHHHHHHHHHH-HHHHHHcCCCHHH
Confidence 26999988877765554 4446778988753
No 10
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.93 E-value=4.6e-24 Score=240.67 Aligned_cols=170 Identities=13% Similarity=0.164 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.++.++.........+.+|.+ .+++|++..+.|+..+++.++..++++++|+++||+|||++++.+.++.+++.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 25 VAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH
Confidence 3334344444444455666664 456999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++++.++++|++.|++.|. .+...+++.|++|++ ++++++...+.++|.++||++++++.+.. |||+.|++.++
T Consensus 104 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~ 182 (394)
T PRK10213 104 FANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAV 182 (394)
T ss_pred HHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHH
Confidence 999999999999999999986 888899999999875 45689999999999999999999999887 99999999887
Q ss_pred HHHHHHHHHhhhccc
Q psy3157 371 LFVVNFVYTYWVVTD 385 (822)
Q Consensus 371 ~~li~~ll~~~~~~e 385 (822)
+.++..++.....|+
T Consensus 183 l~~~~~l~~~~~~p~ 197 (394)
T PRK10213 183 MGVLCIFWIIKSLPS 197 (394)
T ss_pred HHHHHHHHHHHHCCC
Confidence 766555443334444
No 11
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=5.5e-24 Score=237.33 Aligned_cols=170 Identities=19% Similarity=0.266 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHHHHHHHHHhh
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILL-TCLFTCIVSYLLLGLY 295 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~-~~~ll~~i~~ll~~~a 295 (822)
.+++...+.+...|.++.|+++++|.+..+.|++.+++.++..+.++++|+++||+|||+.++ .+.++.+++.++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 467777788888999999998889999999999999999999999999999999999988765 4566666777888889
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH----HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA----FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra----~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++.+++.|++.|.+.+. .+...++..|+.|+++|. .+....+.++|.++||++++.+.+.. |||+.|++.++
T Consensus 85 ~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~f~~~~~ 163 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVMFLTAAL 163 (375)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHHHHHHHH
Confidence 9999999999998877765 677788888988876665 56777788999999999999999886 99999999988
Q ss_pred HHHHHHHHHhhhcccCC
Q psy3157 371 LFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 371 ~~li~~ll~~~~~~e~~ 387 (822)
+.++..++.++++||.+
T Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 87777766666677644
No 12
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.7e-23 Score=236.44 Aligned_cols=171 Identities=18% Similarity=0.299 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
++.+..++...+.+...|+++.|+++++|++..++|++.+...++..+.++++|+++||+|||++++++.++.+++.+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 56678888888889999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.++++++.+++.|++.|++.+. .+...+++.+++|+ +++++|+.....++|..+||++++++. .. ||++.|++.+
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~ 171 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGA 171 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHH
Confidence 9999999999999999999885 67788999999976 456799999999999999999999998 44 9999999988
Q ss_pred HHHHHHHHHHhhhccc
Q psy3157 370 ALFVVNFVYTYWVVTD 385 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e 385 (822)
++.++..++..++.|+
T Consensus 172 ~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 172 VLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHhCCc
Confidence 8777666554455543
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=1.5e-24 Score=241.95 Aligned_cols=166 Identities=20% Similarity=0.195 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
..+++....+...| ++.+++|++..+.|++.+++.++..++.+++|+++||+|||+++.++.++.+++.+++++++
T Consensus 5 ~~~~~~~~~~~~~~----~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 5 INYLDRANLSFAAP----MLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HHHHHHHhhhHhHH----HHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 34455544444444 35567999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
+++.++++|++.|++.+. .+....++.|++|++ ++++++...+..+|.++||++++.+.+.. +||+.|++.+++.+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHH
Confidence 999999999999999986 888899999999875 45689999999999999999999988886 99999999888877
Q ss_pred HHHHHHhhhcccCC
Q psy3157 374 VNFVYTYWVVTDVK 387 (822)
Q Consensus 374 i~~ll~~~~~~e~~ 387 (822)
+..++.++..++++
T Consensus 160 ~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 160 IWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHhhheecCCC
Confidence 77666555566544
No 14
>PRK03699 putative transporter; Provisional
Probab=99.93 E-value=1.4e-23 Score=236.74 Aligned_cols=165 Identities=11% Similarity=0.068 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+++..++.........+.+|. +.+++|++..+.+++.+.+.+++.++++++|+++||+|||+++.++.++.+++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~ 89 (394)
T PRK03699 11 ISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGL 89 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555556666665 455699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+++++++.+++.|++.|++.|. .+...+++.|++|++.| +++..+....+|..++|.+.+.+.....|||+.|++.+
T Consensus 90 ~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~ 169 (394)
T PRK03699 90 MFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIG 169 (394)
T ss_pred HHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 9999999999999999999986 77788899999987555 46677778889999999999888754349999999888
Q ss_pred HHHHHHHHH
Q psy3157 370 ALFVVNFVY 378 (822)
Q Consensus 370 ~~~li~~ll 378 (822)
++.++..++
T Consensus 170 ~~~~~~~~~ 178 (394)
T PRK03699 170 LVYVAIFIL 178 (394)
T ss_pred HHHHHHHHH
Confidence 877665544
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=4.5e-24 Score=238.11 Aligned_cols=166 Identities=14% Similarity=0.069 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHH
Q psy3157 221 DLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYV 300 (822)
Q Consensus 221 ~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~ 300 (822)
.......+.|.+|. +++++|++..+.|++.+.+.+++.++++++|+++||+|||+++..+++....+.+.....++++.
T Consensus 3 ~~~~~~~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 3 SQAIWVTFSPVLSL-VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hhHHHHHHHhhHHH-HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455666777776 45569999999999999999999999999999999999999877665555444433333479999
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q psy3157 301 IFFVRILLGLFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 301 l~i~r~l~Gig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll 378 (822)
++++|++.|++.+...+....++|++|++ +|++++...+..+|.++++++++++.+.. |||+.|++.+++.++..++
T Consensus 82 l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHH
Confidence 99999999999987566666779999875 45699999999999999999999999886 9999999989888887777
Q ss_pred HhhhcccCCC
Q psy3157 379 TYWVVTDVKK 388 (822)
Q Consensus 379 ~~~~~~e~~~ 388 (822)
.++++||+++
T Consensus 161 ~~~~lp~~p~ 170 (368)
T TIGR00903 161 VLAALPALPF 170 (368)
T ss_pred HHHHcCCCCC
Confidence 7777887653
No 16
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=1e-24 Score=251.68 Aligned_cols=161 Identities=17% Similarity=0.106 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----hchHHHH
Q psy3157 227 LIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL-----YKSVYVI 301 (822)
Q Consensus 227 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~-----a~s~~~l 301 (822)
.+.+..|. +.+++|++..+.|++.+++.+++.++++++|+++||+|||+++.+++++++++.++.++ +++++.+
T Consensus 47 ~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 125 (467)
T PRK09556 47 NFKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLM 125 (467)
T ss_pred ChhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 33344554 55679999999999999999999999999999999999999999888888777766655 5899999
Q ss_pred HHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHHH
Q psy3157 302 FFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE--NGFFYICCMTSALFVVNF 376 (822)
Q Consensus 302 ~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~--~gw~~~f~i~~~~~li~~ 376 (822)
+++|++.|++.+. .+....++++++|++ ++++|++..+.++|.+++++++.++.... .+|+..|.+.+++.++..
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~ 205 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIG 205 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHH
Confidence 9999999999986 788889999999874 55689999999999999999987776542 369999988888877766
Q ss_pred HHHhhhcccCCC
Q psy3157 377 VYTYWVVTDVKK 388 (822)
Q Consensus 377 ll~~~~~~e~~~ 388 (822)
++.+++.++.++
T Consensus 206 i~~~~~~~~~p~ 217 (467)
T PRK09556 206 FIGLRYGSDSPE 217 (467)
T ss_pred HHHHHhCCCChh
Confidence 665555555443
No 17
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=1.1e-23 Score=233.86 Aligned_cols=157 Identities=14% Similarity=0.083 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRIL 307 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l 307 (822)
..+..| ++.+++|++..+.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.++++++++++.++++|++
T Consensus 22 ~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (377)
T TIGR00890 22 WTLLAP-PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGL 100 (377)
T ss_pred hhhHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444 5666799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 308 LGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 308 ~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.|++.+. ++.....+.+++|+ |+++.++...+.++|.++++++.+.+.+.. |||+.|++.+++.++..++.+++.++
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 101 ASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHheec
Confidence 9999986 77777888899875 566789999999999888777777777765 99999999998888777665556554
Q ss_pred C
Q psy3157 386 V 386 (822)
Q Consensus 386 ~ 386 (822)
+
T Consensus 180 ~ 180 (377)
T TIGR00890 180 P 180 (377)
T ss_pred C
Confidence 3
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=6.5e-24 Score=238.82 Aligned_cols=172 Identities=15% Similarity=0.197 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..+.+.+......+..+. +.+++|++..+.|++.+++.++..++++++|+++||+|||++++++.++.+++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 94 (405)
T TIGR00891 16 AAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC 94 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 5666777777777777777775 556799999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYEN-GFFYICCMT 368 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~-gw~~~f~i~ 368 (822)
+++++++.+++.|++.|++.+. .+...+++.|++|++ ++++++...+..+|.++++.+++.+.+..+ +||+.|++.
T Consensus 95 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~ 174 (405)
T TIGR00891 95 GFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFIS 174 (405)
T ss_pred HHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHH
Confidence 9999999999999999999986 788899999999864 456899999999999999999999887651 499999876
Q ss_pred HHHHHHHHHHHhhhcccC
Q psy3157 369 SALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 369 ~~~~li~~ll~~~~~~e~ 386 (822)
++..++.. +.....||+
T Consensus 175 ~~~~~~~~-~~~~~~~~~ 191 (405)
T TIGR00891 175 ILPIIFAL-WLRKNIPEA 191 (405)
T ss_pred HHHHHHHH-HHHHhCCCC
Confidence 65544433 334445554
No 19
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.92 E-value=1.9e-23 Score=240.02 Aligned_cols=152 Identities=10% Similarity=0.055 Sum_probs=130.6
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHhh
Q psy3157 231 LVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFF-VRILLG 309 (822)
Q Consensus 231 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i-~r~l~G 309 (822)
.++. +.+++|++..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++++++.+++ .|++.|
T Consensus 41 ~~~~-i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G 119 (455)
T TIGR00892 41 FFKE-LQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITG 119 (455)
T ss_pred hHHH-HHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3443 45679999999999999999999999999999999999999999999999999999999999988875 468999
Q ss_pred cccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcc
Q psy3157 310 LFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVT 384 (822)
Q Consensus 310 ig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~ 384 (822)
++.+. .++..+++.+++++ |++++|+.+.+..+|..++|++++.+.+.. |||++|++.+++.++..++.++..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 120 LGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred hcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99985 67777888899975 567799999999999999999999999887 9999999999888766655444433
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.91 E-value=1e-22 Score=236.57 Aligned_cols=173 Identities=16% Similarity=0.072 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+++..++.......+...+|.+. +++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.++++++.+++
T Consensus 10 ~~~~~~~~~~ld~tiv~~a~p~i~-~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~ 88 (495)
T PRK14995 10 IIVLVYIPVAIDATVLHVAAPTLS-MTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA 88 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 344555555555566666666544 4699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhc-cc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDIC-VD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMT 368 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~-p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~ 368 (822)
++++|++.++++|+++|+|.+. .+.....+.+.+ |+ |.+++|++.....+|.++||++++++.+.. ||||.|++.
T Consensus 89 ~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~f~i~ 167 (495)
T PRK14995 89 AFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSVFLIN 167 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHH
Confidence 9999999999999999999986 677777777776 44 455799999999999999999999999987 999999999
Q ss_pred HHHHHHHHHHHhhhcccCC
Q psy3157 369 SALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 369 ~~~~li~~ll~~~~~~e~~ 387 (822)
..+.++..++..+++|+.+
T Consensus 168 ~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 168 VPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHhCCCCC
Confidence 8888877777667777643
No 21
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=2.9e-23 Score=234.26 Aligned_cols=161 Identities=22% Similarity=0.295 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..++...+.+...|.+|.++.+++|.+..+.|++.+++.++++++++++|+++||+|||++++++.++++++.+.+
T Consensus 19 ~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (399)
T PRK05122 19 SIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLY 98 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHH
Confidence 46677888888889999999998888899999999999999999999999999999999999999999998887776655
Q ss_pred Hhh--------chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q psy3157 293 GLY--------KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGF 361 (822)
Q Consensus 293 ~~a--------~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw 361 (822)
.++ .+++.+++.|++.|++.+. .+....++.|++|++ ++++++...+..+|.++||++++.+.+.. ||
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~ 177 (399)
T PRK05122 99 LLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG-GL 177 (399)
T ss_pred HHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-cH
Confidence 442 2567889999999999986 777788889999764 55688888889999999999999999887 99
Q ss_pred HHHHHHHHHHHHH
Q psy3157 362 FYICCMTSALFVV 374 (822)
Q Consensus 362 ~~~f~i~~~~~li 374 (822)
++.+++.+++.++
T Consensus 178 ~~~~~~~~~~~~~ 190 (399)
T PRK05122 178 AGLGLLIMLLALL 190 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 9988876665443
No 22
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=7.9e-23 Score=226.23 Aligned_cols=163 Identities=18% Similarity=0.249 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+....++...+.....+.+|.|..+ ++.+..+.|++.+++.++.+++++++|+++||+|||++++++.++.+++.++.+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 4456777777777788888877765 899999999999999999999999999999999999999999999888888888
Q ss_pred hhc-----hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 294 LYK-----SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 294 ~a~-----s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
++. +++.+++.|++.|++.+. .+...+++.|++|++ ++++++.+.+..+|.++||++++.+.+.. ||++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~~ 161 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWAI 161 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHH
Confidence 877 999999999999999986 788899999999874 45689999999999999999999999886 999999
Q ss_pred HHHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFVY 378 (822)
Q Consensus 366 ~i~~~~~li~~ll 378 (822)
++.++..++..++
T Consensus 162 ~~~~~~~~~~~~~ 174 (365)
T TIGR00900 162 WVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 9887766655544
No 23
>KOG2532|consensus
Probab=99.91 E-value=3.4e-24 Score=243.33 Aligned_cols=358 Identities=20% Similarity=0.241 Sum_probs=258.5
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHhhcccch-h
Q psy3157 239 QVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK--SVYVIFFVRILLGLFKHT-Q 315 (822)
Q Consensus 239 ~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~--s~~~l~i~r~l~Gig~g~-~ 315 (822)
+++++..+.|++.+.+++|+++++++.|+++||+|.|+++.++.++.++++++.+.+. +++.+++.|+++|++.|. +
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHH
Confidence 5889999999999999999999999999999999999999999999999999999875 456778999999999997 9
Q ss_pred hHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCCCcccc
Q psy3157 316 VLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKYPTRT 393 (822)
Q Consensus 316 ~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~~~~~ 393 (822)
+....+.+.|.|+.+| ..++...+..+|.+++-+++|++.+...||+++||+.+++.++..++++++..++|.+.+..
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~i 226 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNI 226 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 9999999999997555 58888889999999999999999998339999999999999999998777777666543321
Q ss_pred CCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccccccchhhhhhhh
Q psy3157 394 SLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKFKEGEEKPKWAKKDLSFYNDADLER 473 (822)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 473 (822)
+ .+|++.
T Consensus 227 s-------------------------------------------------------------------------~~El~~ 233 (466)
T KOG2532|consen 227 S-------------------------------------------------------------------------EKELKY 233 (466)
T ss_pred C-------------------------------------------------------------------------HHHHHH
Confidence 1 112211
Q ss_pred hhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcccCCCCCCcchhhhhcccCCCCCCCChhh
Q psy3157 474 LFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESSDVNPLLQEEIDMDMGNDRPRDIKE 553 (822)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (822)
+.+. +.++.. ++
T Consensus 234 I~~~---------------------------k~~~~~-----------------------------------------~~ 245 (466)
T KOG2532|consen 234 IEKG---------------------------KSEAHV-----------------------------------------KK 245 (466)
T ss_pred HHhc---------------------------cccccc-----------------------------------------CC
Confidence 1000 000000 00
Q ss_pred hhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEehhhhh
Q psy3157 554 ERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLV 633 (822)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~ 633 (822)
. .+. .+..+++. ..+|.+++..+...++...+..+.|.|+.+.+|++.++.|++.+++.++
T Consensus 246 ~--------~~v-----P~~~i~ts------~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~ 306 (466)
T KOG2532|consen 246 K--------PPV-----PYKAILTS------PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLA 306 (466)
T ss_pred C--------CCC-----CHHHHHcC------HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHH
Confidence 0 000 01111111 2358899999999999999999999999999999999999999999999
Q ss_pred ccccceeee-eccc-Cc-------cchh--HHHHHHHHHHHHHHHhhh--HHHHHHHHHHhhhccccCCCCccccccccc
Q psy3157 634 GSFSNVLIH-IDSR-NS-------YSSL--YYSFILLTVSILALYVSV--NLYLFVLLLVSCKKFKEGEEKPKWAKKDLS 700 (822)
Q Consensus 634 ~~v~~i~~G-~~~~-~~-------~~~l--~~~~~l~~~~~~~l~~~~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 700 (822)
..+..++.| +.++ .. ++++ .+++...++.++.+.+.. ..+..++++.....+.+.
T Consensus 307 ~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~------------ 374 (466)
T KOG2532|consen 307 MAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGF------------ 374 (466)
T ss_pred HHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHccc------------
Confidence 999999999 3332 11 2223 334444444455555444 222333333222211100
Q ss_pred cccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHhhhhhhhccchhhhH
Q psy3157 701 FYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGII 780 (822)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~lg~~igP~i~G~i 780 (822)
.+.+...+..+. .++.++ .++|+.|++.+++++++|.+.|.+
T Consensus 375 ----------------------~~~Gf~~~~~~~-----------apq~a~-----~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 375 ----------------------NISGFYKNHQDI-----------APQHAG-----FVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred ----------------------chhhhHhhhhhc-----------cchHHH-----HHHHHHHHHHHHHHHHHHHheeeE
Confidence 111221111110 122245 799999999999999999999998
Q ss_pred h-hhccCcccchhhHHHHHHHHHHhhh
Q psy3157 781 S-DWVQDNYKVTFLVAFLFGAVGVVTT 806 (822)
Q Consensus 781 ~-d~~~~~~~~~f~~~~~~~l~~~~~~ 806 (822)
. |.+-.+|..+|++.+++.+++.++.
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 8 4444578999999999999888763
No 24
>KOG2504|consensus
Probab=99.91 E-value=1.5e-22 Score=232.66 Aligned_cols=397 Identities=14% Similarity=0.129 Sum_probs=261.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHH-HHHhh
Q psy3157 231 LVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFV-RILLG 309 (822)
Q Consensus 231 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~-r~l~G 309 (822)
.+-..++++++.+..+++|+.++......+.+|+.+.+.||+|.|.+.++|.++.+++.++..++++++.+++. .++.|
T Consensus 67 v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G 146 (509)
T KOG2504|consen 67 LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGG 146 (509)
T ss_pred hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 44445677899999999999999999999999999999999999999999999999999999999999988875 78899
Q ss_pred cccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 310 LFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 310 ig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
+|.|. +.+...++..+|++ |..++|+...+.++|.++-|.+..++.+.. |||+.+++.+.+.+..++......|...
T Consensus 147 ~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 147 LGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-GWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred ccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99996 88889999999986 678899999999999999999999999998 9999999999998777777666655443
Q ss_pred CCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccccccchh
Q psy3157 388 KYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKFKEGEEKPKWAKKDLSFYN 467 (822)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 467 (822)
...+. ..+..+ . .+
T Consensus 226 ~~~~~-~~~~~~-------~-------------------------------------------------~~--------- 239 (509)
T KOG2504|consen 226 PKKPN-EEKDLR-------N-------------------------------------------------SA--------- 239 (509)
T ss_pred CCCch-hhhhhc-------c-------------------------------------------------cc---------
Confidence 32221 000000 0 00
Q ss_pred hhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcccCCCCCCcchhhhhcccCCCCC
Q psy3157 468 DADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESSDVNPLLQEEIDMDMGNDR 547 (822)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (822)
.+.+. .......+.+..+. ...+. ...
T Consensus 240 -~~~~~--------------------------~~~~~~~~~~~~~~----------------~~~~~-------~~~--- 266 (509)
T KOG2504|consen 240 -ASVES--------------------------TPKPVELRISERDS----------------GLKKL-------SLS--- 266 (509)
T ss_pred -ccccc--------------------------cccccccccccCCC----------------CCCcc-------ccc---
Confidence 00000 00000000000000 00000 000
Q ss_pred CCChhhhhhhcccccccccccchhhh----hhhhhhhhchhhhhhHHHHHHHHHHHHHHhhhhhhHHhhhcccCCCccce
Q psy3157 548 PRDIKEERHVEKDSRARVSLSQSSFL----TYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVT 623 (822)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~ 623 (822)
.....++..++ .+....+..+. +.+++ ..++.+.+...+..++.......++.|.. ..|++..++
T Consensus 267 -~~~~~~~~~~~---~~~~~~~~~~~~~d~~ll~~------~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~a 335 (509)
T KOG2504|consen 267 -NLATLKRGPDK---WRNSPLQAFLSMLDLSLLKD------PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDA 335 (509)
T ss_pred -chhhhhhCCcc---ccccchhhhhhhhhHHHHcC------chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhh
Confidence 00000000000 00000000010 11111 23344444445555555555666777776 679999999
Q ss_pred eeEEehhhhhccccceeee-ecccCccchh-H--HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhccccCCCCcccccccc
Q psy3157 624 GYTVSFQGLVGSFSNVLIH-IDSRNSYSSL-Y--YSFILLTVSILALYVSVNLYLFVLLLVSCKKFKEGEEKPKWAKKDL 699 (822)
Q Consensus 624 g~l~si~gi~~~v~~i~~G-~~~~~~~~~l-~--~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 699 (822)
++++++.++.++++++++| +.++...+.. . .+.++.+++.+.+++..+.+.++...++.+...+.
T Consensus 336 a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~----------- 404 (509)
T KOG2504|consen 336 AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGS----------- 404 (509)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH-----------
Confidence 9999999999999999999 4444443333 3 33333444444555666665555555444422211
Q ss_pred ccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHhhhhhhhccchhhh
Q psy3157 700 SFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGI 779 (822)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~lg~~igP~i~G~ 779 (822)
...+.. ....+..|.++.++++|+...+.+++.++||+++|+
T Consensus 405 -------~~~l~~-------------------------------~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~ 446 (509)
T KOG2504|consen 405 -------FSSLTP-------------------------------VILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGL 446 (509)
T ss_pred -------HHHHHH-------------------------------HHHHHHcChhhcchHHHHHHHHhHHHHHcCccccee
Confidence 001110 123344677888889999999999999999999999
Q ss_pred HhhhccCcccchhhHHHHHHHHHHhhhee
Q psy3157 780 ISDWVQDNYKVTFLVAFLFGAVGVVTTRV 808 (822)
Q Consensus 780 i~d~~~~~~~~~f~~~~~~~l~~~~~~~~ 808 (822)
+.|.++ +|...|+.++++.+++.+++..
T Consensus 447 ~~d~tg-~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 447 LYDITG-NYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred eeeccC-CeeeehhhcChHHHHHHHHHHH
Confidence 999997 6999999999999988876433
No 25
>PRK12382 putative transporter; Provisional
Probab=99.91 E-value=1.9e-22 Score=227.08 Aligned_cols=159 Identities=19% Similarity=0.244 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..++...+.+...|.+|.++.+++|+|..++|++.+++.+++.++++++|+++||+|||++++++.+...++.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 19 RIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 45556677777888889999998888899999999999999999999999999999999999999999888776655432
Q ss_pred H---h-----hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q psy3157 293 G---L-----YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGF 361 (822)
Q Consensus 293 ~---~-----a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw 361 (822)
. + ..+++.++++|+++|++.+. .+...+++.|++|++ ++++++...+..+|.++||++++++.+.. ||
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~ 177 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GF 177 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-Ch
Confidence 2 1 35788999999999999986 777788999999864 55789999999999999999999998876 99
Q ss_pred HHHHHHHHHHH
Q psy3157 362 FYICCMTSALF 372 (822)
Q Consensus 362 ~~~f~i~~~~~ 372 (822)
++.+.+..++.
T Consensus 178 ~~~~~~~~~~~ 188 (392)
T PRK12382 178 AALALTTMVLP 188 (392)
T ss_pred HHHHHHHHHHH
Confidence 98776654443
No 26
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.91 E-value=3.6e-22 Score=225.20 Aligned_cols=173 Identities=18% Similarity=0.269 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHH-HHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSL-LQIISAPTVGYLSDLYGRKTIL-LTCLFTCIVSYL 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~ig~~~~G~LsDr~Grr~~l-~~~~ll~~i~~l 290 (822)
...+..++...+.....|.++.|+.+++|++.+++|++.+...+ +..++++++|+ +||+|||+.+ ..+.++.+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~ 97 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACT 97 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHH
Confidence 45567888888889999999999999999999999999876655 55555555555 9999999875 455666667777
Q ss_pred HHHhhchHHHHHHHHHHhhcccc-hhhHHHHHHHHhccccchH----HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 291 LLGLYKSVYVIFFVRILLGLFKH-TQVLCKAYISDICVDSTKA----FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 291 l~~~a~s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~~ra----~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
+.+++++++.+++.+.+.|...+ ..+...+++.++.++++|. .++.+.+.++|.++||++++++.+.. |||+.|
T Consensus 98 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~~f 176 (393)
T PRK15011 98 LFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTVMY 176 (393)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHHHH
Confidence 78888999887766555444333 4677788888888776664 36777888999999999999999887 999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCC
Q psy3157 366 CMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 366 ~i~~~~~li~~ll~~~~~~e~~ 387 (822)
++.+++.++..++.++++|+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 177 LSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHhhcCccC
Confidence 9998888777766666677643
No 27
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.91 E-value=3e-22 Score=230.04 Aligned_cols=156 Identities=17% Similarity=0.144 Sum_probs=127.0
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh----chHHHHHHHH
Q psy3157 230 PLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY----KSVYVIFFVR 305 (822)
Q Consensus 230 ~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a----~s~~~l~i~r 305 (822)
..+| ++.++ |++..+.|++.+.+.++++++++++|+++||+|||++++++.++++++.++++++ .+++.+++.|
T Consensus 50 ~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 50 LAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL 127 (452)
T ss_pred HhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH
Confidence 3344 56666 9999999999999999999999999999999999999999999999998888775 3788889999
Q ss_pred HHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHH-HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Q psy3157 306 ILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFF-IGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYW 381 (822)
Q Consensus 306 ~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~-igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~ 381 (822)
++.|++.|. .+.....+.+++|++ ++++|+++.+.++|.. ++|+++..+.... +||+.|++.+++.++..++..+
T Consensus 128 ~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN-DWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999886 677778889999875 4468888888888864 5565544444343 9999999998887777666667
Q ss_pred hcccCCC
Q psy3157 382 VVTDVKK 388 (822)
Q Consensus 382 ~~~e~~~ 388 (822)
++|++++
T Consensus 207 ~~~~~~~ 213 (452)
T PRK11273 207 MMRDTPQ 213 (452)
T ss_pred HccCCHh
Confidence 7776553
No 28
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=2.2e-22 Score=232.61 Aligned_cols=166 Identities=17% Similarity=0.135 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
+..++.........|.+|. +.+++|++..+.+++.+.+.+++.++++++|+++||+|||+++.++.++++++.++++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~-l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~ 121 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPI-IRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV 121 (476)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444555666664 566799999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhcccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHh----c----ccchHHHH
Q psy3157 296 KSVYVIFFVRILLGLFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIH----Y----ENGFFYIC 365 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~----~----~~gw~~~f 365 (822)
++++.++++|++.|++.+...+...++++++|++ ++++|+.+.+.++|..+++.+.+.+.. . ..|||++|
T Consensus 122 ~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f 201 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF 201 (476)
T ss_pred cCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence 9999999999999998876445667889999864 556888877777777777666554432 2 12899999
Q ss_pred HHHHHHHHHHHHHHhhh
Q psy3157 366 CMTSALFVVNFVYTYWV 382 (822)
Q Consensus 366 ~i~~~~~li~~ll~~~~ 382 (822)
++.+++.++..++.+++
T Consensus 202 ~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 202 FVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998887776665444
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=4.6e-23 Score=229.15 Aligned_cols=167 Identities=19% Similarity=0.252 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
..+.+........| ++.+++|++..+.|++.+++.++..++++++|+++||+|||++++++.++.+++.++.++++
T Consensus 6 ~~~~~~~~~~~~~~----~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 6 AYYLVRKNFALAMP----YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred HHHHhHHhhhhhhH----HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 34444444444444 45567999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHH-HHHHHHHhcccchHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGP-AIGGHVIHYENGFFYICCMTSALF 372 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp-~l~g~l~~~~~gw~~~f~i~~~~~ 372 (822)
+++.+++.|++.|++.+. .+...+++.|++|++ ++++++.+.+..+|.+++| .+++.+.+.. +|++.|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHHHHHHH
Confidence 999999999999999986 888899999999975 4468889999999999999 4666666665 9999999988887
Q ss_pred HHHHHHHhhhcccCCC
Q psy3157 373 VVNFVYTYWVVTDVKK 388 (822)
Q Consensus 373 li~~ll~~~~~~e~~~ 388 (822)
++..++.+++.+++++
T Consensus 161 ~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHHHheeeCCCcc
Confidence 7766665666665543
No 30
>PRK10504 putative transporter; Provisional
Probab=99.90 E-value=8.5e-22 Score=227.47 Aligned_cols=171 Identities=16% Similarity=0.331 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.++++.++.....+.+.+.+|.+.+ ++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 92 (471)
T PRK10504 14 IVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC 92 (471)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 4566677777777788888887776 599999999999999999999999999999999999999999999999999998
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.++++++.+++.|+++|++.+. .+...+++.|++|++. +++|+...+.++|.++||.++|.+.+.. |||+.|++..
T Consensus 93 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~f~~~~ 171 (471)
T PRK10504 93 ALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWIFLINI 171 (471)
T ss_pred HHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHHHHHHH
Confidence 9999999999999999999986 7888999999999754 4688899999999999999999999887 9999999988
Q ss_pred HHHHHHHHHHhhhccc
Q psy3157 370 ALFVVNFVYTYWVVTD 385 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e 385 (822)
++..+..++.....|+
T Consensus 172 ~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 172 PVGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 8777666665555554
No 31
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.90 E-value=5.1e-22 Score=224.42 Aligned_cols=172 Identities=24% Similarity=0.369 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFT-----IGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIV 287 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~-----~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i 287 (822)
.+.+..++...+.+...|.+|.+.++ +|++..+ .|++.+++.++..++++++|+++||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 34556677777778888999988765 8887544 48899999999999999999999999999999999999999
Q ss_pred HHHHHHhhchHHHHHHHHHHhhcccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 288 SYLLLGLYKSVYVIFFVRILLGLFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 288 ~~ll~~~a~s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
+.+++.++++++.+++.|++.|++.+..+....++.+++|++ ++++++...+..+|.++||++++.+.+.. +|++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~ 175 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRPVF 175 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHH
Confidence 999888899999999999999998666667778888988864 55688999999999999999999998876 999999
Q ss_pred HHHHHHHHHHHHHHhhhcccC
Q psy3157 366 CMTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 366 ~i~~~~~li~~ll~~~~~~e~ 386 (822)
++.+++.++..++.+++.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 176 FITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccC
Confidence 999888777766656666554
No 32
>PRK10054 putative transporter; Provisional
Probab=99.90 E-value=6e-22 Score=223.52 Aligned_cols=173 Identities=17% Similarity=0.245 Sum_probs=150.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q psy3157 212 HKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll 291 (822)
+.+....++...+.+...|+++.|+++++|++..++|++.+++.++..++++++|+++||+|||++++++.++.+++.++
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~ 89 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA 89 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Confidence 35667788888889999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMT 368 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~ 368 (822)
.+++++++.+++++++.|.+.+. .+...+++.|.+|++ ++++|+.....++|.++||++++++.. . +|+.+|++.
T Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~ 167 (395)
T PRK10054 90 IPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLA 167 (395)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHH
Confidence 99999999998888888877665 677788999999864 456899999999999999999999875 4 899999998
Q ss_pred HHHHHHHHHHHhhhcccC
Q psy3157 369 SALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 369 ~~~~li~~ll~~~~~~e~ 386 (822)
+++.++..++..+++|++
T Consensus 168 ~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 888777666555555543
No 33
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.90 E-value=1.7e-22 Score=229.51 Aligned_cols=169 Identities=21% Similarity=0.264 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL 294 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~ 294 (822)
....++..++.....+.+|.+.++ ++.+..+.|++.+.+.++..++++++|+++||+|||+++.++.++.+++.++.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 344566666777777778876665 7789999999999999999999999999999999999998888777776655432
Q ss_pred -----hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Q psy3157 295 -----YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICC 366 (822)
Q Consensus 295 -----a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~ 366 (822)
.++++.+++.|++.|++.+. .+...+++.+++|++ +++.++.....++|.++||.+++.+.+.. +|++.|+
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~ 180 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYG 180 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHH
Confidence 46788899999999999886 677788999999874 55688888999999999999999998876 8999998
Q ss_pred HHHHHHHHHHHHHhhhcccC
Q psy3157 367 MTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 367 i~~~~~li~~ll~~~~~~e~ 386 (822)
+.++..++..++ .+.+|+.
T Consensus 181 ~~~~~~~~~~~~-~~~l~~~ 199 (417)
T PRK10489 181 LAAAGTFITLLP-LLRLPAL 199 (417)
T ss_pred HHHHHHHHHHHH-HHhCCCC
Confidence 877776655544 3445543
No 34
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=5.7e-22 Score=224.24 Aligned_cols=170 Identities=14% Similarity=0.057 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
...++.++...+.+...++++.+++ ++|.+..+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++.+++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~ 95 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAF 95 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 3455666666666667777787775 589999999999999999999999999999999999999999999988887654
Q ss_pred H---h-hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHH-HHHHHHHHHHHhcccchHHH
Q psy3157 293 G---L-YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGF-FIGPAIGGHVIHYENGFFYI 364 (822)
Q Consensus 293 ~---~-a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~-~igp~l~g~l~~~~~gw~~~ 364 (822)
. + ..+++.+++.|++.|++.+. .+...+.+.+++|+ |++++|+...+.++|. ++||++++.+.+.. ||+..
T Consensus 96 ~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~ 174 (402)
T TIGR00897 96 IVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNT 174 (402)
T ss_pred HHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHH
Confidence 3 3 35788889999999999875 66677788888875 4567999999999996 68999999988776 76665
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q psy3157 365 CCMTSALFVVNFVYTYWVVT 384 (822)
Q Consensus 365 f~i~~~~~li~~ll~~~~~~ 384 (822)
++......++..++..++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 175 LWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 55444433333333333333
No 35
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.90 E-value=6.3e-22 Score=225.28 Aligned_cols=157 Identities=17% Similarity=0.158 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..+.+.+......+.+|. +.+++|++..+.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 100 (426)
T PRK12307 22 SAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS 100 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 4455566666666666666664 556799999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+++++++.++++|++.|++.|. ++....++.|++|++ ++++++...+..+|.+++|.+.+.+.+.. +||+.|++.+
T Consensus 101 ~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~~~f~i~~ 179 (426)
T PRK12307 101 GLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWRAAFFVGL 179 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHHHHHHHHH
Confidence 9999999999999999999986 888899999999875 45688999999999999999999888876 9999998754
Q ss_pred HH
Q psy3157 370 AL 371 (822)
Q Consensus 370 ~~ 371 (822)
+.
T Consensus 180 ~~ 181 (426)
T PRK12307 180 LP 181 (426)
T ss_pred HH
Confidence 33
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=6.2e-22 Score=224.11 Aligned_cols=171 Identities=18% Similarity=0.223 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.+..++...+...+.|.++.+. +++|.+..+.++..+.+.+++.+++++.|+++||+|||++++++.++.+++.++..
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 96 (406)
T PRK15402 18 LVLFEFATYIANDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAIL 96 (406)
T ss_pred HHHHHHHHHhhhhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 34444555556677778888644 56999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++++.+++.|++.|++.+. .+...+++.|++|++. ++.++......+|..+||.+++.+.+.. +||++|++.++
T Consensus 97 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~ 175 (406)
T PRK15402 97 LAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAA 175 (406)
T ss_pred HHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHH
Confidence 999999999999999999886 6778899999998754 4578877788889999999999998876 99999999888
Q ss_pred HHHHHHHHHhhhcccC
Q psy3157 371 LFVVNFVYTYWVVTDV 386 (822)
Q Consensus 371 ~~li~~ll~~~~~~e~ 386 (822)
+.++..+..++..||+
T Consensus 176 ~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 176 LAALSFFGLWRAMPET 191 (406)
T ss_pred HHHHHHHHHHHhCCCC
Confidence 8877766555555554
No 37
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=9.3e-22 Score=220.95 Aligned_cols=360 Identities=14% Similarity=0.120 Sum_probs=242.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH-HHHHHHH-H
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCL-FTCIVSY-L 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~-ll~~i~~-l 290 (822)
.+.+.++....+.+...|++|.|+++ +|++..++|++.+++.+...++++++|+++||+||+....... +...+.. .
T Consensus 8 ~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 8 WLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 45667777778889999999998875 8999999999999999999999999999999999854332211 1111121 2
Q ss_pred HHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 291 LLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 291 l~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.+..+++++.+++.|++.|.+.+. .+...++..++..++++++|....+.++|.++||++++.+.+.. |||+.|++.+
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~~f~~~~ 165 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQNILAILT 165 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHH
Confidence 344678999999999999988875 77777777666444677899999999999999999999999987 9999998876
Q ss_pred HHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHHHHhh
Q psy3157 370 ALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKF 449 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 449 (822)
++.++. ++ .+.++++++++.+.. + .
T Consensus 166 ~~~~~~-~~-~~~~~~~~~~~~~~~-~--~-------------------------------------------------- 190 (382)
T TIGR00902 166 AGLAFM-LI-GFLIKPTIPPKDAIP-E--D-------------------------------------------------- 190 (382)
T ss_pred HHHHHH-HH-HHHcCCCCCCCcccc-c--c--------------------------------------------------
Confidence 553322 22 223332211100000 0 0
Q ss_pred hcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcccCCC
Q psy3157 450 KEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESS 529 (822)
Q Consensus 450 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (822)
.. +.
T Consensus 191 -------------------------------------------------------~~--~~------------------- 194 (382)
T TIGR00902 191 -------------------------------------------------------ES--QG------------------- 194 (382)
T ss_pred -------------------------------------------------------cc--cc-------------------
Confidence 00 00
Q ss_pred CCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhhhhhH
Q psy3157 530 DVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYI 609 (822)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 609 (822)
.....+.++ .+.+|.+.+..++...+...++++++
T Consensus 195 ---------------------------------------~~~~~~~l~------~~~~~~~l~~~~l~~~~~~~~~~~~~ 229 (382)
T TIGR00902 195 ---------------------------------------DSAFIALLK------NPMNLRFLAAVCLIQGAHAAYYGFSA 229 (382)
T ss_pred ---------------------------------------chhHHHHHc------ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000001 12346666777777788888889999
Q ss_pred HhhhcccCCCccceeeEEehhhhhccccceeee-ec-ccCccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhc-cc
Q psy3157 610 SVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-ID-SRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSCKK-FK 686 (822)
Q Consensus 610 ~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~-~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-f~ 686 (822)
.|+++ .|.++.+.|++.++..+..+++.++.+ +. +.+.++.+..+.++.++..+.+.+.++.+...+..++-+. |+
T Consensus 230 ~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~ 308 (382)
T TIGR00902 230 IYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA 308 (382)
T ss_pred HHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence 99977 799999999998888888888888887 43 4455555677777777777777777776655554433221 11
Q ss_pred cCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHH-H
Q psy3157 687 EGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNS-L 765 (822)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~-~ 765 (822)
++. +..+..+.+.+++.++ +.+|++++ .
T Consensus 309 ------------------------------------~~~--------------~~~~~~i~~~~~~~~~-~~q~~~~~~~ 337 (382)
T TIGR00902 309 ------------------------------------VCH--------------LAAMRYIAAQPGSEIA-KLQALYNALA 337 (382)
T ss_pred ------------------------------------HHH--------------HHHHHHHHhCCHhhHH-HHHHHHHHHH
Confidence 000 0011112222333333 58999874 5
Q ss_pred hhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 766 TSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 766 ~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
.++|.++||.++|+++|..| + ..|.+.+++.++++++
T Consensus 338 ~g~g~~~g~~~~G~l~~~~g--~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 338 MGGLIAIFTAFAGFIYPTLG--A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcc--H-HHHHHHHHHHHHHHHH
Confidence 78999999999999999985 3 3355555655666543
No 38
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=1e-21 Score=220.40 Aligned_cols=145 Identities=17% Similarity=0.201 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q psy3157 212 HKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll 291 (822)
+.+.++.++.....+...|.+|.+..+ +|.|..++|++.+.+.++..++++++|+++||+|||+++.++.++.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677778888888899999987775 8999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
++++++++.++++|++.|++.+. .+.....+.+..++ |+|+++++..+.++|..+||.+++.+.+.
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999986 67777777777765 45678999999999999999999998765
No 39
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.89 E-value=6.4e-23 Score=236.52 Aligned_cols=149 Identities=19% Similarity=0.153 Sum_probs=130.2
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHhhcccch-h
Q psy3157 239 QVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY--KSVYVIFFVRILLGLFKHT-Q 315 (822)
Q Consensus 239 ~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a--~s~~~l~i~r~l~Gig~g~-~ 315 (822)
+++++..+.|++.+.+.+++.++++++|+++||+|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+. .
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 588999999999999999999999999999999999999999999999988887554 5688899999999999986 8
Q ss_pred hHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 316 VLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 316 ~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
+....++.|++|++ ++++|+...+..+|.+++|++++.+.+...|||+.|++.+++.++..++.+++.++.+
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p 223 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP 223 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc
Confidence 88999999999975 4568999999999999999999999876238999999999888777766555555544
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=4.6e-22 Score=230.20 Aligned_cols=172 Identities=15% Similarity=0.307 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+++..++..+......+.+|.+. +++|.+..+.+|+.+.+.++..++.+++|+++||+|||++++++.++.+++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 84 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIA-GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC 84 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 344556666666667777777654 4699999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+++++++.++++|+++|++.+. .+...+++.|++|++ +++++++..+..+|..+||.+++++.+.. +||+.|++.+
T Consensus 85 ~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~~~~ 163 (485)
T TIGR00711 85 GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFLINV 163 (485)
T ss_pred hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cceehhhhhh
Confidence 9999999999999999999986 788899999999875 45689999999999999999999999886 9999999988
Q ss_pred HHHHHHHHHHhhhcccC
Q psy3157 370 ALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~ 386 (822)
++.++..++..++.|++
T Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 164 PIGIIVVVVAFFILPRD 180 (485)
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 88877776666666653
No 41
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=6e-22 Score=226.70 Aligned_cols=153 Identities=18% Similarity=0.190 Sum_probs=128.9
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHhhc
Q psy3157 235 YLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY----KSVYVIFFVRILLGL 310 (822)
Q Consensus 235 ~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a----~s~~~l~i~r~l~Gi 310 (822)
++++ +|++..+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.++.++. .+++.+++.|++.|+
T Consensus 52 ~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 130 (438)
T TIGR00712 52 YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGW 130 (438)
T ss_pred HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Confidence 4555 69999999999999999999999999999999999999999999999888877664 467788889999999
Q ss_pred ccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 311 FKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 311 g~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
+.|. ++.....+.|++|++ ++++|+++.+.++|..++|.+.+.+.....+||+.|++.+++.++..++.++++||++
T Consensus 131 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 131 FQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9886 777888999999864 5568999999999999999887765553338999999999888877766666777654
Q ss_pred C
Q psy3157 388 K 388 (822)
Q Consensus 388 ~ 388 (822)
+
T Consensus 211 ~ 211 (438)
T TIGR00712 211 Q 211 (438)
T ss_pred H
Confidence 3
No 42
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.89 E-value=2.2e-22 Score=230.82 Aligned_cols=168 Identities=20% Similarity=0.235 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLS--------NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVS 288 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s--------~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~ 288 (822)
..++..+......+.++... .+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++.++++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~ 114 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPA-FEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIG 114 (481)
T ss_pred HHHhcccccchhhhhhhcHH-HHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHH
Confidence 33333333444444444332 235555 899999999999999999999999999999999999999999999
Q ss_pred HHHHHhh---chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHH---HHHHhccc
Q psy3157 289 YLLLGLY---KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIG---GHVIHYEN 359 (822)
Q Consensus 289 ~ll~~~a---~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~---g~l~~~~~ 359 (822)
.+++.+. .+++.++++|++.|++.+. .+...++++|++|++ ++++++++.+..+|.++||+++ +.+.+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~- 193 (481)
T TIGR00879 115 AILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL- 193 (481)
T ss_pred HHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-
Confidence 8888654 3456899999999999986 788899999999875 4568899999999999999998 5554554
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 360 GFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 360 gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
+||+.|++.++..++.. +..+++||++
T Consensus 194 ~w~~~f~~~~~~~~~~~-~~~~~l~~~~ 220 (481)
T TIGR00879 194 GWRIPLGLQLIPAGLLF-LGLFFLPESP 220 (481)
T ss_pred cHHHHHHHHHHHHHHHH-HHHhcCCCCh
Confidence 99999999665554443 3455667654
No 43
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=2.3e-21 Score=212.83 Aligned_cols=339 Identities=22% Similarity=0.265 Sum_probs=258.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..+..........+..+.+.++ +|.+..+.+++.+...++..++++++|+++||+|||+.+.++.++..++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence 44556677777777788888877664 79999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.++++++.+++.|++.|++.+. .+...+++.|++|++. +.+++...+..+|..+||.+++.+.+.. +|++.+++.+
T Consensus 82 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 160 (352)
T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLFLILA 160 (352)
T ss_pred HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 9999999999999999999986 8889999999998754 4689999999999999999999999886 8999999988
Q ss_pred HHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHHHHhh
Q psy3157 370 ALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVSCKKF 449 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 449 (822)
++.++..++..+. +
T Consensus 161 ~~~~~~~~~~~~~-~----------------------------------------------------------------- 174 (352)
T cd06174 161 ILGLLLALLLLFL-L----------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHH-H-----------------------------------------------------------------
Confidence 8877766553322 1
Q ss_pred hcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcccCCC
Q psy3157 450 KEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFSLESS 529 (822)
Q Consensus 450 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (822)
T Consensus 175 -------------------------------------------------------------------------------- 174 (352)
T cd06174 175 -------------------------------------------------------------------------------- 174 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhhhhhH
Q psy3157 530 DVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFYSNYI 609 (822)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 609 (822)
+.++...+..++.......+..+.+
T Consensus 175 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (352)
T cd06174 175 -------------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLP 199 (352)
T ss_pred -------------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 0013344455556666667777888
Q ss_pred HhhhcccCCCccceeeEEehhhhhccccceeee--ecccCccc-hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhccc
Q psy3157 610 SVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYS-SLYYSFILLTVSILALYVSVNLYLFVLLLVSCKKFK 686 (822)
Q Consensus 610 ~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~-~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~f~ 686 (822)
.++.+.+|.+..+.+.+.++.+++..++.++.+ .++.++++ .+..+..+..++.+.+....+.+...+...+.+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 279 (352)
T cd06174 200 LYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGL 279 (352)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999 34445555 566677777777666665555444444333333211
Q ss_pred cCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHh
Q psy3157 687 EGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLT 766 (822)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~ 766 (822)
+..... ...+. .+..+++..++++|+.+...
T Consensus 280 ~~~~~~------------------------------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~ 310 (352)
T cd06174 280 GFAFPA------------------------------------------------LLTLA-SELAPPEARGTASGLFNTFG 310 (352)
T ss_pred hccchh------------------------------------------------HHHHH-HhhcCHHHHHHHHHHHHHHH
Confidence 110000 00011 11122233336999999999
Q ss_pred hhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 767 SIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 767 ~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
+++..++|.++|++.|.. ++...|++.+++.+++.++
T Consensus 311 ~~~~~i~~~i~g~l~~~~--~~~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 311 SLGGALGPLLAGLLLDTG--GYGGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHHHHHHHHHHhccc--CcchHHHHHHHHHHHHHHH
Confidence 999999999999999865 4666688888877777665
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=2.7e-21 Score=219.46 Aligned_cols=171 Identities=15% Similarity=0.182 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL 294 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~ 294 (822)
.+..+..........|.+|. +.++++.+..+.++..+++.++++++++++|+++||+|||++++++.++++++.+++.+
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 100 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF 100 (413)
T ss_pred HHHHHHHHHHHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 33444455566777788886 55569999999999999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 295 YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 295 a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
+++++.++++|+++|++.+. .+...+++.|++|++ .|+++++..+..+|.++||++++.+.+.. |||+.|++.+++
T Consensus 101 a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~ 179 (413)
T PRK15403 101 TTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVM 179 (413)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence 99999999999999999875 566678899999864 56789999999999999999999998876 999999999988
Q ss_pred HHHHHHHHhhhcccCC
Q psy3157 372 FVVNFVYTYWVVTDVK 387 (822)
Q Consensus 372 ~li~~ll~~~~~~e~~ 387 (822)
.++..++.++.+||++
T Consensus 180 ~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 180 GLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHhCCCCc
Confidence 8777666556667654
No 45
>PRK09952 shikimate transporter; Provisional
Probab=99.89 E-value=1.4e-21 Score=223.69 Aligned_cols=160 Identities=14% Similarity=0.133 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQV--LLSNFTIGAIA-----STFSLLQIISAPTVGYLSDLYGRKTILLTCLFTC 285 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~--g~s~~~~g~~~-----s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~ 285 (822)
...++.+++.+.........+.+..+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++.++.+++
T Consensus 26 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~ 104 (438)
T PRK09952 26 GSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMM 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 3445666666666555555554555544 66665 45543 3455667889999999999999999999999999
Q ss_pred HHHHHHHHhhchHH--------HHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 286 IVSYLLLGLYKSVY--------VIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHV 354 (822)
Q Consensus 286 ~i~~ll~~~a~s~~--------~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l 354 (822)
+++++++++++++. .++++|+++|++.|. ++....++.|++|++.| ..+....+..+|.++++.+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l 184 (438)
T PRK09952 105 GIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLI 184 (438)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986 588899999999986 88889999999998656 46777778888888887776665
Q ss_pred Hh--------cccchHHHHHHHHHHHHH
Q psy3157 355 IH--------YENGFFYICCMTSALFVV 374 (822)
Q Consensus 355 ~~--------~~~gw~~~f~i~~~~~li 374 (822)
.. .. |||+.|++.+++.++
T Consensus 185 ~~~~~~~~~~~~-gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 185 SMMTTDEQFLSW-GWRIPFLFSIVLVLI 211 (438)
T ss_pred HHhCCHHHhhcc-ChHHHHHHHHHHHHH
Confidence 53 33 899999987766543
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.89 E-value=2.8e-21 Score=217.60 Aligned_cols=172 Identities=15% Similarity=0.145 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
.....+....+.....+.+|.+.+ ++|.+..+.++..+.+.++..+++++.|+++||+|||++++++.++.+++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAA-DLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 444555666666677788886554 5999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++++.+++.|++.|++.+. .+...+++.|++|++. +++++.+....+|.+++|.+++.+.+.. +|++.|++.++
T Consensus 87 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~ 165 (392)
T PRK10473 87 LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAA 165 (392)
T ss_pred HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHH
Confidence 999999999999999999886 7788999999998754 4588888888999999999999988776 99999999988
Q ss_pred HHHHHHHHHhhhcccCC
Q psy3157 371 LFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 371 ~~li~~ll~~~~~~e~~ 387 (822)
+.++..++..+.+||++
T Consensus 166 ~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 166 MGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 88777776666666543
No 47
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=1e-21 Score=211.98 Aligned_cols=363 Identities=17% Similarity=0.220 Sum_probs=268.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
++..++...++.....+.+...+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++..+-++..+
T Consensus 18 ~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~ 97 (417)
T COG2223 18 LSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLA 97 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 44555555566566666666677789999999999999999999999999999999999999999999999999999998
Q ss_pred hhch---HHHHHHHHHHhhcccchhhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccc---hHHHH
Q psy3157 294 LYKS---VYVIFFVRILLGLFKHTQVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENG---FFYIC 365 (822)
Q Consensus 294 ~a~s---~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~g---w~~~f 365 (822)
++.+ ++.+++++.+.|++.|.+.+...+++.++|++. .++|++. +.++|..+..+++-.++... + |+.+.
T Consensus 98 ~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~-g~~~w~~~~ 175 (417)
T COG2223 98 FAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF-GFLAWRNVA 175 (417)
T ss_pred HHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH-hhHHHHHHH
Confidence 8754 459999999999999988899999999999854 4688887 88888888888887777776 6 99999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVS 445 (822)
Q Consensus 366 ~i~~~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 445 (822)
.+..+..++..++.++...+.+..++... +..
T Consensus 176 ~i~~~~l~v~~v~~~~~~~d~p~~r~~~~--~~~---------------------------------------------- 207 (417)
T COG2223 176 GIYVVALAIAAVLAWLGMNDVPEHRASVK--PQL---------------------------------------------- 207 (417)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhcccc--ccc----------------------------------------------
Confidence 99888888888877777655443211100 000
Q ss_pred HHhhhcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcc
Q psy3157 446 CKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFS 525 (822)
Q Consensus 446 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (822)
. .+
T Consensus 208 -----------------------~--~~---------------------------------------------------- 210 (417)
T COG2223 208 -----------------------P--AQ---------------------------------------------------- 210 (417)
T ss_pred -----------------------h--hH----------------------------------------------------
Confidence 0 00
Q ss_pred cCCCCCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhh
Q psy3157 526 LESSDVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFY 605 (822)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 605 (822)
-+...++ +..|.+.+.++...-++..+-
T Consensus 211 ----------------------~~~v~~~------------------------------~~~W~lsllY~~tFG~Fvgfs 238 (417)
T COG2223 211 ----------------------LKAVFSN------------------------------KDTWLLSLLYFATFGGFVGFS 238 (417)
T ss_pred ----------------------HHHHhcC------------------------------cchHHHHHHHHHHHHHHHHHH
Confidence 0000000 123888888888888888888
Q ss_pred hhhHHhhhcccCCCccceeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhh-------HHHHHH
Q psy3157 606 SNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSV-------NLYLFV 676 (822)
Q Consensus 606 ~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~-------~~~~~~ 676 (822)
.++|.|++++||.++.++|...+...+.+.+.+.+.| .|+.+..+.+...++.++++..++.+.. +...+.
T Consensus 239 ~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~ 318 (417)
T COG2223 239 AYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFV 318 (417)
T ss_pred HHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHH
Confidence 9999999999999999999999999999999999999 4444777777777777777666555432 223333
Q ss_pred HHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccc
Q psy3157 677 LLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGS 756 (822)
Q Consensus 677 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 756 (822)
...+....+.+ +|+++..- ..|. .-++..|
T Consensus 319 ~~~l~l~~~~G------------------------------~GnGsvfk------~Ip~---------if~~~~G----- 348 (417)
T COG2223 319 AVFLALFVFAG------------------------------LGNGSVFK------MIPV---------IFPKETG----- 348 (417)
T ss_pred HHHHHHHHHhc------------------------------cCcchhee------echH---------HHHhhhh-----
Confidence 22222221111 12222111 1111 1122344
Q ss_pred hhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhhh
Q psy3157 757 NISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTT 806 (822)
Q Consensus 757 ~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~~ 806 (822)
.+.|++..++++|+..-|...|...|.|| .|...|++...+.+++.+++
T Consensus 349 ~v~G~vga~G~lGGf~lp~~~g~~~~~tg-~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 349 AVTGIVGAIGGLGGFFLPLAFGVSLDLTG-SYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred HHHHHHHHhccccccchhHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999998 78888888888888887764
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.88 E-value=9.6e-21 Score=220.05 Aligned_cols=158 Identities=16% Similarity=0.207 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.+..+++.+......+.+|. +.+++|++..+.+++.+.+.++++++++++|+++||+|||++++++.++.+++.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 102 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTE-VQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC 102 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666676665 556799999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+++++++.+++.|++.|++.+. .+...+++.|++|++. ++++++..+..+|.+++|.+++.+.+.. +||+.|++.+
T Consensus 103 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~f~~~~ 181 (496)
T PRK03893 103 GFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-GWRALFFIGI 181 (496)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CHHHHHHHHH
Confidence 9999999999999999999886 7888899999998754 5688999999999999999999999886 9999998754
Q ss_pred HHH
Q psy3157 370 ALF 372 (822)
Q Consensus 370 ~~~ 372 (822)
+..
T Consensus 182 ~~~ 184 (496)
T PRK03893 182 LPI 184 (496)
T ss_pred HHH
Confidence 433
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.88 E-value=3.2e-21 Score=220.31 Aligned_cols=158 Identities=15% Similarity=0.115 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQV---LLSNFTIGAI---ASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSY 289 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~---g~s~~~~g~~---~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ 289 (822)
++.+++.+....+.... .++.+++ +.+..+.+.. .+..+++..++++++|+++||+|||+++.++.+++++++
T Consensus 29 ~~~~~~~~d~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~ 107 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCS-LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGS 107 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 44555555555433333 3555566 3555544443 444555556999999999999999999999999999999
Q ss_pred HHHHhhchHH--------HHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHh--
Q psy3157 290 LLLGLYKSVY--------VIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIH-- 356 (822)
Q Consensus 290 ll~~~a~s~~--------~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~-- 356 (822)
+++++++++. .++++|+++|++.|. ++...++++|++|++.| +.++...+..+|.+++++++..+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 187 (432)
T PRK10406 108 LVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTL 187 (432)
T ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999988763 588899999999986 89999999999997555 4677777777788887776655432
Q ss_pred ------cccchHHHHHHHHHHHHHH
Q psy3157 357 ------YENGFFYICCMTSALFVVN 375 (822)
Q Consensus 357 ------~~~gw~~~f~i~~~~~li~ 375 (822)
.. |||++|++.+++.++.
T Consensus 188 ~~~~~~~~-gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 188 EDAELREW-GWRIPFALGAVLAVVA 211 (432)
T ss_pred CHHHHhcc-chHHHHHHHHHHHHHH
Confidence 33 9999999877766554
No 50
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.88 E-value=5.2e-21 Score=213.98 Aligned_cols=172 Identities=19% Similarity=0.300 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.+..++...+.....|.+|.+ .+++|.+..+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 88 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEI-AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA 88 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 3344455566677777888864 456999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++++.+++.|++.|++.+. .+...+++.|++|++ ++++++.+....+|..+||.+++.+.+.. +||+.|++.++
T Consensus 89 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~~ 167 (385)
T TIGR00710 89 LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLSL 167 (385)
T ss_pred HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence 999999999999999999986 788899999999875 45689999999999999999999998876 99999999888
Q ss_pred HHHHHHHHHhhhcccCC
Q psy3157 371 LFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 371 ~~li~~ll~~~~~~e~~ 387 (822)
+.++..++.++..||++
T Consensus 168 ~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 168 AGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 87777666555555543
No 51
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.88 E-value=3.9e-22 Score=219.73 Aligned_cols=172 Identities=28% Similarity=0.443 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
+..++.........+.++.++.+++|.+..+++++.+++.++..++++++|+++||+|||+++.++.++.+++.++..++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 45666667777778888866777899999999999999999999999999999999999999999999999996666676
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALF 372 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~ 372 (822)
++.+.++++|++.|++.+. .+...+++.|++|++ .+++++...+.++|.++||.+++++.+.. +||+.|++.+++.
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAFLISAILS 161 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHHHHHHHHH
T ss_pred hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccccccccccchh
Confidence 8888999999999999986 889999999999974 45699999999999999999999998776 8999999999999
Q ss_pred HHHHHHHhhhcccCCC
Q psy3157 373 VVNFVYTYWVVTDVKK 388 (822)
Q Consensus 373 li~~ll~~~~~~e~~~ 388 (822)
++..++..++++++++
T Consensus 162 ~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 162 LIAAILFILFLPEPPP 177 (352)
T ss_dssp HHHHHHHHCCC---ST
T ss_pred hhhhhhHhhhhhhccc
Confidence 8887765555555443
No 52
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.88 E-value=4.1e-21 Score=216.85 Aligned_cols=170 Identities=11% Similarity=0.090 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
+..++.........|..+.+.+.++|+|..|.+++.+++.+++.++.++.|+++||+|.|+++.++.+++++.+++.+++
T Consensus 41 ~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a 120 (462)
T PRK15034 41 SCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA 120 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555555544444799999999999999999999999999999999999999999999999999999987
Q ss_pred -----chHHHHHHHHHHhhcccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHH-----hcc-----
Q psy3157 296 -----KSVYVIFFVRILLGLFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVI-----HYE----- 358 (822)
Q Consensus 296 -----~s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~-----~~~----- 358 (822)
++++.+++.|++.|++.+.+++....+++|+|++ ++++|+.....++|..++++++..+. ...
T Consensus 121 ~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~ 200 (462)
T PRK15034 121 VQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGV 200 (462)
T ss_pred HcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 8999999999999998445888999999999964 56688886566666655544443322 211
Q ss_pred -------cchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 359 -------NGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 359 -------~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.+|+.++++.+++.++..++.+++.++
T Consensus 201 ~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 201 PQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 148888888888777776665555443
No 53
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.88 E-value=4.6e-21 Score=215.32 Aligned_cols=157 Identities=15% Similarity=0.150 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh----HHHHHHHHHHHHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRK----TILLTCLFTCIVSYLL 291 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr----~~l~~~~ll~~i~~ll 291 (822)
..++....+.+...|.+|.|+++ +|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. ....
T Consensus 11 ~~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 11 LSYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 34556667788999999999975 899999999999999999999999999999999984 3332222221 2223
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
...+++++.+++.|++.|++.+. .+...+++.++.++++++++....+.++|.++||++++++.+.. |||..|++.++
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f~~~~~ 166 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAILWILTA 166 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHHHH
Confidence 34468899999999999998875 67777777887666778888888888999999999999999987 99999988776
Q ss_pred HHHHHH
Q psy3157 371 LFVVNF 376 (822)
Q Consensus 371 ~~li~~ 376 (822)
..++..
T Consensus 167 ~~~~~~ 172 (382)
T PRK11128 167 GVASML 172 (382)
T ss_pred HHHHHH
Confidence 554443
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=2e-20 Score=210.98 Aligned_cols=168 Identities=13% Similarity=0.167 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.++.++..++........+... .+++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++++++.+++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALL-KELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 455566666655444444444444 4689999999999999999999999999999999999999999999999888887
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.++.++ ++.|+++|++.+. .|...+++.|++|++ .|++|+......+|.++||.++|++.+. .|+..+++.+
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~ 160 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCA 160 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 776664 6789999999986 889999999999974 5579999999999999999999999886 4887777776
Q ss_pred HHHHHHHHHHhhhcccCC
Q psy3157 370 ALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e~~ 387 (822)
.+.++..+ ..+.+|+.+
T Consensus 161 ~~~~~~~~-~~~~l~~~~ 177 (393)
T PRK11195 161 LIYLLAAL-FNLFIPRLG 177 (393)
T ss_pred HHHHHHHH-HHhcCCCCc
Confidence 65544433 345566543
No 55
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.88 E-value=8.4e-21 Score=214.18 Aligned_cols=171 Identities=19% Similarity=0.255 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+....++...+.+...|+++.|+.+++|.+..+.|++.+++.++..++++++|+++||+|||+.++.+.+..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 45556777778888999999999998899999999999999999999999999999999999999987766655443322
Q ss_pred H---hh-----chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q psy3157 293 G---LY-----KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 293 ~---~a-----~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~ 363 (822)
. +. ..+..+++.+++.|++.+. .+....+..+..+++.+.+|....+.++|.++||+++|.+.+. +|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~--~~~~ 163 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFSI--DPQI 163 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhcc--CchH
Confidence 1 11 1233455667888888775 6666677767554455567888888899999999999988664 8999
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q psy3157 364 ICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 364 ~f~i~~~~~li~~ll~~~~~~e 385 (822)
.|++.+++.++..++.+...++
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 164 VFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999888877776554443333
No 56
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.87 E-value=1.2e-20 Score=219.03 Aligned_cols=172 Identities=17% Similarity=0.194 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HH--HHHH--HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLS--NF--TIGA--IASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCI 286 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s--~~--~~g~--~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~ 286 (822)
...++.+++.+....+....+ ++.++++.+ .. .++. +.++.++++.++++++|+++||+|||+++.+++++++
T Consensus 20 ~~~~g~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~ 98 (490)
T PRK10642 20 AASLGNAMEWFDFGVYGFVAY-ALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMS 98 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 344566666666665554444 445556432 21 1222 2577889999999999999999999999999999999
Q ss_pred HHHHHHHhhchHHH--------HHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 287 VSYLLLGLYKSVYV--------IFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVI 355 (822)
Q Consensus 287 i~~ll~~~a~s~~~--------l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~ 355 (822)
++++++++++++.. ++++|+++|++.|. ++...++++|++|++.| ..++...+..+|.++|+.++..+.
T Consensus 99 i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~ 178 (490)
T PRK10642 99 ISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLIS 178 (490)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999864 78899999999986 89999999999987544 577777777788888876665543
Q ss_pred h--------cccchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 356 H--------YENGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 356 ~--------~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
. .. |||+.|++.+++.++.. +....+||++
T Consensus 179 ~~~~~~~~~~~-gWR~~f~i~~~~~l~~~-~~~~~~~esp 216 (490)
T PRK10642 179 TIVGEANFLDW-GWRIPFFIALPLGIIGL-YLRHALEETP 216 (490)
T ss_pred HhcCHHHhcCc-cHHHHHHHHHHHHHHHH-HHHHcCCCCh
Confidence 2 33 89999999776555433 3344566654
No 57
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=7.1e-21 Score=216.53 Aligned_cols=171 Identities=21% Similarity=0.186 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
......++...+.+...|+++.|+.+++|++..++|++.+++.++..++++++|+++||+|||++++++..+.+++....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~ 93 (420)
T PRK09528 14 IFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPF 93 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 44556777777788899999999999999999999999999999999999999999999999999987666555443321
Q ss_pred H---hhc-----hHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q psy3157 293 G---LYK-----SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 293 ~---~a~-----s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~ 363 (822)
. .+. .+...++++++.|.+... .+....+..+..+++++.+|....+.++|.++||++++.+.+. +|++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~ 171 (420)
T PRK09528 94 FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI--NPQI 171 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc--CchH
Confidence 1 111 111122233333333322 2333333333322344567888888899999999999998764 8999
Q ss_pred HHHHHHHHHHHHHHHHhhhccc
Q psy3157 364 ICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 364 ~f~i~~~~~li~~ll~~~~~~e 385 (822)
.|++.+++.++.+++.++..++
T Consensus 172 ~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 172 NFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred hHHHHHHHHHHHHHHHhccccc
Confidence 9998887777666554444333
No 58
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.87 E-value=3.4e-20 Score=206.19 Aligned_cols=175 Identities=17% Similarity=0.220 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
..++..++.........|.+|.++++++|++..+.+++.+++.++++++++++|+++||+|||++++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 45556666666677778888877888899999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc-hHHHHHHHHHHhhcccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhc---------ccc
Q psy3157 293 GLYK-SVYVIFFVRILLGLFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHY---------ENG 360 (822)
Q Consensus 293 ~~a~-s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~---------~~g 360 (822)
++++ +++.+++.|++.|++.+..++...++++++|++ ++++++...+.++|..+++.+++.+... ..+
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~ 164 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA 164 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999 999999999999998766666788999999875 4457888777778888877777666542 127
Q ss_pred hHHHHH-HHHHHHHHHHHHHhhhcccCC
Q psy3157 361 FFYICC-MTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 361 w~~~f~-i~~~~~li~~ll~~~~~~e~~ 387 (822)
||+.|+ +.+++.++..++.+++.++.+
T Consensus 165 w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 165 WGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 999994 445555555444445555543
No 59
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.87 E-value=5.6e-20 Score=214.13 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQ----VLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVS 288 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~----~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~ 288 (822)
+++++.+.+.+.........+.+-.+. .+.+..+.+++.+.+.++++++++++|+++||+|||+++.++.+++.++
T Consensus 20 ~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~ 99 (502)
T TIGR00887 20 IAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIA 99 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 345555666666555555555432221 2455677899999999999999999999999999999999999999999
Q ss_pred HHHHHhhch------HHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhc--
Q psy3157 289 YLLLGLYKS------VYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHY-- 357 (822)
Q Consensus 289 ~ll~~~a~s------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~-- 357 (822)
.++++++++ ++.++++|++.|++.|. .+....+++|++|++.| ++++...+..+|.++|+.++..+...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 179 (502)
T TIGR00887 100 TVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFK 179 (502)
T ss_pred HHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998888765 78899999999999996 88999999999998554 58888899999999999988766431
Q ss_pred --------------------ccchHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy3157 358 --------------------ENGFFYICCMTSALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 358 --------------------~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~ 389 (822)
..+||+.|.+.++..++..+ ..+++||+|+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~ 230 (502)
T TIGR00887 180 HSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRY 230 (502)
T ss_pred cccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHH
Confidence 12799999877766655444 35778998763
No 60
>KOG2615|consensus
Probab=99.86 E-value=4.6e-20 Score=195.11 Aligned_cols=151 Identities=32% Similarity=0.513 Sum_probs=121.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccchhhHHHH
Q psy3157 241 LLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHTQVLCKA 320 (822)
Q Consensus 241 g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~~~~~~~ 320 (822)
+.+..-.|++.+.+.+++++.++.||.++||+|||+++++|++..++..++.+.+.|+..+++.|++.|++.|...+..+
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rA 143 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRA 143 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHH
Confidence 34556789999999999999999999999999999999999999999999999999997777779999999999899999
Q ss_pred HHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHh---cccchHHHH--HHHHHHHHHHHHHHhhhcccCCCCcc
Q psy3157 321 YISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIH---YENGFFYIC--CMTSALFVVNFVYTYWVVTDVKKYPT 391 (822)
Q Consensus 321 ~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~---~~~gw~~~f--~i~~~~~li~~ll~~~~~~e~~~~~~ 391 (822)
+++|+++++. ++++.++..+++|.++||.+||++.. ..+.+..++ ++..++.........+++||+-+.++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk 221 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRK 221 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchh
Confidence 9999998754 46888999999999999999999987 222222222 22222222223344677888855443
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.86 E-value=1.5e-20 Score=208.67 Aligned_cols=149 Identities=15% Similarity=0.108 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q psy3157 224 AASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFF 303 (822)
Q Consensus 224 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i 303 (822)
......|.+|. +.+++|++..+.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.+.+ .+++++.+++
T Consensus 15 ~~~~~~~~lp~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 15 ALTSVGPLLPQ-IRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred ccccCcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 33445667775 455699999999999999999999999999999999999999999998888887777 7788999999
Q ss_pred HHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHH
Q psy3157 304 VRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYEN-GFFYICCMTSALFVV 374 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~-gw~~~f~i~~~~~li 374 (822)
.|++.|++.+. .+....++.|++|+ +++++++++.+.++|..+++.+++.+.+... +||+.|.+.+++.++
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99999999986 66677788898875 4667999999999999999999998887642 499998877665443
No 62
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=2.5e-20 Score=213.06 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH-
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL- 292 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~- 292 (822)
+....+...+......+.+|. +++++|++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++++++.+++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~ 109 (438)
T PRK10133 31 LCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFW 109 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 344445555555566666665 477899999999999999999999999999999999999999999999999999875
Q ss_pred --HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 293 --GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVI 355 (822)
Q Consensus 293 --~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~ 355 (822)
.++++++.++++|+++|+|.|. .+....++.++.+++.| .+++.+..+.+|..+||.+++.+.
T Consensus 110 ~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 110 PAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999996 78888888888766444 478899999999999999987654
No 63
>TIGR00895 2A0115 benzoate transport.
Probab=99.86 E-value=1.9e-20 Score=209.82 Aligned_cols=171 Identities=18% Similarity=0.173 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
+..+..........+..|. +.+++|.+..+.+++.+.+.++..++.+++|+++||+|||+++.++.++.+++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 24 LIMLMDGYDLAAMGFAAPA-ISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHHHHHHHHHHhhHHH-HhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 3344444444444555554 445699999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALF 372 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~ 372 (822)
++++.+++.|++.|++.+. .+...+++.|++|+ |++++++...+..+|..+||.+++.+.+.. ||++.|++.+++.
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~~~~~~~~~ 181 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRSLFYVGGIAP 181 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cceeehhhhhhHH
Confidence 9999999999999999986 88889999999986 456789999999999999999999999886 9999999987776
Q ss_pred HHHHHHHhhhcccCCC
Q psy3157 373 VVNFVYTYWVVTDVKK 388 (822)
Q Consensus 373 li~~ll~~~~~~e~~~ 388 (822)
++..++.++++|++++
T Consensus 182 ~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 182 LLLLLLLMRFLPESID 197 (398)
T ss_pred HHHHHHHHHhCCCCCh
Confidence 6666665666776543
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.86 E-value=3.7e-20 Score=208.68 Aligned_cols=170 Identities=18% Similarity=0.199 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL 294 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~ 294 (822)
....++..+......|.+|.+. +++|++..+.+++.+.+.++..++++++|+++||+|||+++.++.++.+++.++..+
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 92 (394)
T PRK11652 14 VLLVAVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF 92 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3444455556667777777655 469999999999999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 295 YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 295 a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
+++++.+++.|++.|++.+. .+....+..|.++++ .++.++.+.+..+|..+||++++.+.+.. |||+.|++.+++
T Consensus 93 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~ 171 (394)
T PRK11652 93 AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLL 171 (394)
T ss_pred HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHH
Confidence 99999999999999999886 667778888988754 44688888899999999999999998876 999999998877
Q ss_pred HHHHHHHHhhhcccC
Q psy3157 372 FVVNFVYTYWVVTDV 386 (822)
Q Consensus 372 ~li~~ll~~~~~~e~ 386 (822)
.++..++..++.||+
T Consensus 172 ~~~~~~~~~~~~~~~ 186 (394)
T PRK11652 172 GAGVTFSMARWMPET 186 (394)
T ss_pred HHHHHHHHHHhCCcc
Confidence 766655555556654
No 65
>PRK15075 citrate-proton symporter; Provisional
Probab=99.86 E-value=5.8e-20 Score=210.04 Aligned_cols=156 Identities=14% Similarity=0.132 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH-HHHH-----HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAI-ASTF-----SLLQIISAPTVGYLSDLYGRKTILLTCLFTCI 286 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~-~s~~-----~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~ 286 (822)
.+.++.+++.+....+....|. +.++++.+..+.+.+ .+.. .++..++++++|+++||+|||++++++.++++
T Consensus 19 ~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~ 97 (434)
T PRK15075 19 RVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHH
Confidence 3445556666555555555554 555688877665433 2222 23334788999999999999999999999999
Q ss_pred HHHHHHHhhchHH--------HHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 287 VSYLLLGLYKSVY--------VIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVI 355 (822)
Q Consensus 287 i~~ll~~~a~s~~--------~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~ 355 (822)
++.++++++++++ .++++|++.|++.|. .+....+++|++|++ ++++++...+.++|..+|+.+++.+.
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 98 SGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999876 468899999999986 777889999999975 45688888888888888888877763
Q ss_pred --------hcccchHHHHHHHHH
Q psy3157 356 --------HYENGFFYICCMTSA 370 (822)
Q Consensus 356 --------~~~~gw~~~f~i~~~ 370 (822)
+.. |||++|++.++
T Consensus 178 ~~~~~~~~~~~-gWr~~f~~~~~ 199 (434)
T PRK15075 178 QWLSPAQMAEW-GWRIPFLIGCL 199 (434)
T ss_pred HhCCHHHHhcc-chHHHHHHHHH
Confidence 344 89999987543
No 66
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=4.9e-20 Score=208.17 Aligned_cols=165 Identities=20% Similarity=0.249 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.+..++..++.....|.++.+ .+++|.+..+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 89 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAI-QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML 89 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHH
Confidence 3344555556677777887764 456999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++++++.+++.|++.|++.+. .+...+++.|+++++. +..+.......+|..+||.+++++.+.. |||+.|++.++
T Consensus 90 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~ 168 (401)
T PRK11043 90 WVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFA 168 (401)
T ss_pred HhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHH
Confidence 999999999999999999875 6667788999998753 4577777888899999999999999887 99999999888
Q ss_pred HHHHHHHHHh
Q psy3157 371 LFVVNFVYTY 380 (822)
Q Consensus 371 ~~li~~ll~~ 380 (822)
+.++..++.+
T Consensus 169 ~~~~~~~~~~ 178 (401)
T PRK11043 169 ITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHH
Confidence 8777665543
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.85 E-value=7.8e-20 Score=204.40 Aligned_cols=163 Identities=17% Similarity=0.296 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIF 302 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~ 302 (822)
++.....|.+|.+.+ ++|++..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.++
T Consensus 5 ~~~~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 5 LAIDMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred hHHHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 445667788887766 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 303 FVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 303 i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
+.|++.|++.+. .+...+++.|++|++ ++++++...+..+|..++|.+++.+.+.. +|++.|++.+++.++..++.
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHH
Confidence 999999999886 788889999999875 45688999999999999999999999876 99999999888887776665
Q ss_pred hhhcccCC
Q psy3157 380 YWVVTDVK 387 (822)
Q Consensus 380 ~~~~~e~~ 387 (822)
.++.||++
T Consensus 163 ~~~~~~~~ 170 (377)
T PRK11102 163 FFFIPETL 170 (377)
T ss_pred HHhCCccC
Confidence 66666543
No 68
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.85 E-value=1.3e-19 Score=209.57 Aligned_cols=172 Identities=18% Similarity=0.199 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQV--------LLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTC 285 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~--------g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~ 285 (822)
..++.+.+.+....+.+..+. +++.+ +.+..+.+++.+++.++.+++++++|+++||+|||++++++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~ 95 (479)
T PRK10077 17 ATLGGLLFGYDTAVISGTVES-LNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLF 95 (479)
T ss_pred HHHHHHhcCcccceehHhHHH-HHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 344455555555555555553 33334 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh------------chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHH
Q psy3157 286 IVSYLLLGLY------------KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAI 350 (822)
Q Consensus 286 ~i~~ll~~~a------------~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l 350 (822)
+++.++++++ ..++.++++|+++|++.|. .+...++++|++|++ ++++++.+.+..+|.++++.+
T Consensus 96 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~ 175 (479)
T PRK10077 96 FISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFV 175 (479)
T ss_pred HHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8888877753 2356788999999999996 899999999999974 456888899999999999888
Q ss_pred HHHHHh--------cccchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 351 GGHVIH--------YENGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 351 ~g~l~~--------~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
++.+.. .. |||+.|++.+++.++..+. .+++||+++
T Consensus 176 ~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~-~~~l~~s~~ 219 (479)
T PRK10077 176 NYFIARSGDASWLNTD-GWRYMFASEAIPALLFLML-LYFVPETPR 219 (479)
T ss_pred HHHHhccCcccccccC-ChHHHHHHHHHHHHHHHHH-HHcCCCCcH
Confidence 776642 33 8999999888777665544 566777653
No 69
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.85 E-value=3.6e-20 Score=210.59 Aligned_cols=166 Identities=15% Similarity=0.169 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGR-KTILLTCLFTCIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Gr-r~~l~~~~ll~~i~~ll 291 (822)
-+++..+++...++...|.++.++.+++|++..++|++.+++.++.+++++++|+++||+|| |+++.++.++.+++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 35677888888999999999999999999999999999999999999999999999999965 77888888888888888
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHh--------cc--ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDI--------CV--DSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENG 360 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~--------~p--~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~g 360 (822)
..+.++++.+++.|++.|++.+. .+...++...+ .. ++.|..| .+|.++||.+++.+... ..
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~-~~ 158 (418)
T TIGR00889 86 AAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE-LS 158 (418)
T ss_pred HHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhccc-ch
Confidence 88889999999999999997764 44444433222 21 2345444 47888999999887332 24
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 361 FFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 361 w~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
|. .|++.+++.++..++ .+.+||.+
T Consensus 159 ~~-~f~~~~~~~~~~~~~-~~~~~e~~ 183 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVF-ALTLPDIP 183 (418)
T ss_pred hH-HHHHHHHHHHHHHHH-HhcCCCCC
Confidence 55 355555555555443 45566653
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.84 E-value=1.8e-19 Score=230.21 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH---HHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHH
Q psy3157 245 FTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLT---CLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKA 320 (822)
Q Consensus 245 ~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~---~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~ 320 (822)
...++..+++.++++++++++|+++||+|||+++.. +.++.++..++....++++.++++|+++|++.+. .++..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888899999999999999999999999997643 2223333333333458999999999999999986 789999
Q ss_pred HHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 321 YISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 321 ~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
++.++++++ .+++|+.+++.++|.++||+++|++.... +|++.|++.+++.++. ++..+++++++
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 198 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLG-WLASLFIPKTG 198 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHH-HHHHhhCCCCC
Confidence 999999874 56899999999999999999999999987 9999994444444433 33345555543
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.84 E-value=2.2e-19 Score=208.19 Aligned_cols=170 Identities=13% Similarity=0.176 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChHH-HHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-----GRKTI-LLTCLFTCI 286 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-----Grr~~-l~~~~ll~~ 286 (822)
.+.+.++..........+.+|.++++ .|.+..++|.+ +.....+ ++.+++|+++||+ |||+. ++++.+..+
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 34455566666677788888888776 69999999986 3444444 6889999999999 99885 557777777
Q ss_pred HHHHHHHhh---chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy3157 287 VSYLLLGLY---KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENG 360 (822)
Q Consensus 287 i~~ll~~~a---~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~g 360 (822)
++.+++++. ++++.+.+.+++.|++.+. .++..+++.|++|+++| +.++...++.+|.++++.+++++.+...|
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 777766664 4788888899999998886 77889999999987544 58889999999999999999999883239
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccC
Q psy3157 361 FFYICCMTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 361 w~~~f~i~~~~~li~~ll~~~~~~e~ 386 (822)
||..|++.+++.++..+.. ++.||+
T Consensus 173 Wr~~f~i~a~l~ll~~l~~-~~~~e~ 197 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIAT-LLAPEP 197 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 9999999998877665543 345654
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=4.5e-19 Score=226.84 Aligned_cols=153 Identities=15% Similarity=0.130 Sum_probs=117.1
Q ss_pred HHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---hhchHHHHHHHHHHhh
Q psy3157 235 YLRTQVLLS--NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG---LYKSVYVIFFVRILLG 309 (822)
Q Consensus 235 ~l~~~~g~s--~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~---~a~s~~~l~i~r~l~G 309 (822)
++...++.+ ....+++.+++.++++++++++|+++||+|||++++++.++.+++.++.. .+++++.++++|++.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 114 (1146)
T PRK08633 35 TLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLG 114 (1146)
T ss_pred HHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 344445654 34578999999999999999999999999999999988876655555443 3578999999999999
Q ss_pred cccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccchHHHHHHHHHHHHHHHHH
Q psy3157 310 LFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHY--------ENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 310 ig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~--------~~gw~~~f~i~~~~~li~~ll 378 (822)
++.+. .++..+++.|++|++ ++++|+...+..+|.++||++++++.+. ..+|++.+.+.+++.++..++
T Consensus 115 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1146)
T PRK08633 115 AQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLI 194 (1146)
T ss_pred HHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHH
Confidence 99986 788899999999864 5679999999999999999999999876 324555555444444333333
Q ss_pred HhhhcccCC
Q psy3157 379 TYWVVTDVK 387 (822)
Q Consensus 379 ~~~~~~e~~ 387 (822)
..+.+|+.+
T Consensus 195 ~~~~~~~~~ 203 (1146)
T PRK08633 195 FAYRLPKVP 203 (1146)
T ss_pred HHhcCcCCC
Confidence 344555543
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.83 E-value=9.3e-19 Score=198.38 Aligned_cols=165 Identities=16% Similarity=0.135 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.++...++..+..+...|.+|. +++++|++..+.|++.+.+.+++.+++++.|++.||+|||++++++.++++++.+++
T Consensus 7 ~~~~~f~~~G~~~~~~~~l~~~-~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~ 85 (410)
T TIGR00885 7 LITSLFALWGFANDITNPMVPQ-FQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLF 85 (410)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4555666666667777788875 566799999999999999999999999999999999999999999999999998886
Q ss_pred Hh---hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc--------
Q psy3157 293 GL---YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE-------- 358 (822)
Q Consensus 293 ~~---a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~-------- 358 (822)
.. .++++.+++.|++.|+|.|. .+....++.++.|++ .|.+++.+...++|..+||.+++.+....
T Consensus 86 ~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~ 165 (410)
T TIGR00885 86 WPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDV 165 (410)
T ss_pred HHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhh
Confidence 44 46899999999999999996 788888999988764 45688999999999999999998875321
Q ss_pred -----------------cchHHHHHHHHHHHHHHHHH
Q psy3157 359 -----------------NGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 359 -----------------~gw~~~f~i~~~~~li~~ll 378 (822)
.+||++|++.+++.++..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 166 LDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 26999999888877665544
No 74
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.83 E-value=3.5e-19 Score=199.03 Aligned_cols=134 Identities=16% Similarity=0.168 Sum_probs=106.2
Q ss_pred CCHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHh
Q psy3157 242 LSNFTIGAIAST-----FSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVY--------VIFFVRILL 308 (822)
Q Consensus 242 ~s~~~~g~~~s~-----~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~--------~l~i~r~l~ 308 (822)
.+..+.+.+.+. ..++..++++++|+++||+|||+++.++.++.+++.+++++++++. .++++|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 445555554433 3334456899999999999999999999999999999999988865 478889999
Q ss_pred hcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHh--------cccchHHHHHHHHHHHHHHH
Q psy3157 309 GLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIH--------YENGFFYICCMTSALFVVNF 376 (822)
Q Consensus 309 Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~--------~~~gw~~~f~i~~~~~li~~ 376 (822)
|++.+. .+...+++.|++|++.| ..++...+..+|.++++.+++.+.. .. +||+.|++.+++.++..
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW-GWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc-chHHHHHHHHHHHHHHH
Confidence 999986 78889999999987555 5888888889999999988876643 33 89999988776655443
No 75
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.82 E-value=1.4e-18 Score=196.47 Aligned_cols=168 Identities=13% Similarity=0.131 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChH-HHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-----GRKT-ILLTCLFTCIVS 288 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-----Grr~-~l~~~~ll~~i~ 288 (822)
...++......+...+.+|.|+++ .|++.+++|++..+... .+..+++|+++||+ |||+ .++++.++.+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345667777888899999999997 69999999999766665 58899999999999 8765 677888888777
Q ss_pred HHHHHhh---chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q psy3157 289 YLLLGLY---KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFF 362 (822)
Q Consensus 289 ~ll~~~a---~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~ 362 (822)
..+.++. .+++.+++..++.+++.+. .++..+++.|++|++ +++.++...+..+|.++|+.+++.+.+...|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 7777775 3577777777777777665 688899999999875 456888888999999999999999888533899
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccC
Q psy3157 363 YICCMTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 363 ~~f~i~~~~~li~~ll~~~~~~e~ 386 (822)
..|++.+++.++..+. .++.||+
T Consensus 162 ~~f~i~a~~~l~~~l~-~~~~~e~ 184 (402)
T PRK11902 162 NTYLLMAGLMLAGALT-TLWAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHhcCCC
Confidence 9999988877665543 3455554
No 76
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.82 E-value=2.7e-18 Score=198.51 Aligned_cols=366 Identities=16% Similarity=0.220 Sum_probs=246.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+.....+..++..+..-.++-++.+ ..-|+..++++..+..+..++.++++|.++||+.||++++.+.++.++..++.
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L 92 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLL 92 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Confidence 45566777777776666666655554 56789999999999999999999999999999999999999887776555444
Q ss_pred Hh-----hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q psy3157 293 GL-----YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYI 364 (822)
Q Consensus 293 ~~-----a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~ 364 (822)
++ ..+++.+++..++.|++.+. .|...+++.+++|++ .++.++.++..+++.++||.++|.++... |-.++
T Consensus 93 ~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~-G~~~~ 171 (524)
T PF05977_consen 93 AVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF-GAAAA 171 (524)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH-HHHHH
Confidence 33 24788899999999999997 788899999999985 46799999999999999999999999887 88899
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHH
Q psy3157 365 CCMTSALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLV 444 (822)
Q Consensus 365 f~i~~~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 444 (822)
|.+.++..++..++...+.++.++++.. .
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~~~~~~-~-------------------------------------------------- 200 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPPPSSLP-R-------------------------------------------------- 200 (524)
T ss_pred HHHHHHHHHHHHHHHHHccccccccccc-h--------------------------------------------------
Confidence 9988877766554432222211100000 0
Q ss_pred HHHhhhcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCc
Q psy3157 445 SCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAF 524 (822)
Q Consensus 445 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (822)
++..++
T Consensus 201 ---------------------------e~~~~~----------------------------------------------- 206 (524)
T PF05977_consen 201 ---------------------------ERFFSA----------------------------------------------- 206 (524)
T ss_pred ---------------------------hhhhhh-----------------------------------------------
Confidence 000000
Q ss_pred ccCCCCCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhh
Q psy3157 525 SLESSDVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLF 604 (822)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 604 (822)
+++ -.++++.. +.....++..++.++....+
T Consensus 207 --------------------------l~~------------------G~ryv~~~-----~~l~~~l~~~~~~~l~~~a~ 237 (524)
T PF05977_consen 207 --------------------------LRE------------------GLRYVRSS-----PPLRSVLLRSFLFNLFASAV 237 (524)
T ss_pred --------------------------HHH------------------HHHHHhcc-----hHHHHHHHHHHHHHHhhhHH
Confidence 000 00000000 00122223333444444455
Q ss_pred hhhhHHhhhcccCCCccceeeEEehhhhhccccceeee-ecccCccch-hHHHHHHHHHHHHHHHhhhHHHHHHHHHHhh
Q psy3157 605 YSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-IDSRNSYSS-LYYSFILLTVSILALYVSVNLYLFVLLLVSC 682 (822)
Q Consensus 605 ~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~~~~~~-l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 682 (822)
+..+|.+..+.+|.++...|++.+..|+++++|.++.+ +.++....+ +..+.++.+++++.+++.++.+...+.+.+.
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 56678888888999999999999999999999999988 444433333 3556666677777777777777666555444
Q ss_pred hccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHH
Q psy3157 683 KKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIY 762 (822)
Q Consensus 683 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~ 762 (822)
+.. |. .+. ..-+ ...++...++..+++++++
T Consensus 318 G~~--------~~---------------------------~~~-------------~~~~-t~~Q~~~P~~~~GRv~si~ 348 (524)
T PF05977_consen 318 GAA--------WI---------------------------IAN-------------SSLN-TLVQLSVPDWVRGRVFSIY 348 (524)
T ss_pred HHH--------HH---------------------------HHH-------------HHHH-HHHHHhCCHHHHhHHHHHH
Confidence 421 11 000 0000 1112222333333799999
Q ss_pred HHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 763 NSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 763 ~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
+++...+..+|..++|.+.|..|.. ..++++++.++++.++
T Consensus 349 ~~~~~g~~~lGsll~G~la~~~g~~--~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 349 QMVFFGGMPLGSLLWGFLADHFGVR--TALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHH
Confidence 9999999999999999999998743 3466666655555555
No 77
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.81 E-value=1.2e-17 Score=192.67 Aligned_cols=165 Identities=15% Similarity=0.203 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQ--VLLSNFTIGAIASTFSLLQIISAPTVGYLSDL-YGRKTILLTCLFTCIVSY 289 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~~~~ll~~i~~ 289 (822)
.+.+..++..++.+...+.++.|+.++ +|++..+.|++.+.+.++..++++++|+++|| +|||+++.++.++.+++.
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~ 93 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGH 93 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 566677888889999999999999887 89999999999999999999999999999999 899999999999999999
Q ss_pred HHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q psy3157 290 LLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS-----TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 290 ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~-----~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~ 363 (822)
++.+++++++.+++++++.|+|.|. .+...+++++++|++ .++++++..+.++|.++||++++++.+.. ||++
T Consensus 94 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~ 172 (475)
T TIGR00924 94 FMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHV 172 (475)
T ss_pred HHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHH
Confidence 9999998888999999999999986 788899999999752 33689999999999999999999999886 8999
Q ss_pred HHHHHHHHHHHHHHH
Q psy3157 364 ICCMTSALFVVNFVY 378 (822)
Q Consensus 364 ~f~i~~~~~li~~ll 378 (822)
.|++.++..++..+.
T Consensus 173 ~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 173 GFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988655554433
No 78
>TIGR00898 2A0119 cation transport protein.
Probab=99.80 E-value=7.6e-19 Score=204.73 Aligned_cols=148 Identities=20% Similarity=0.290 Sum_probs=130.2
Q ss_pred HHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhccc
Q psy3157 236 LRTQVLLS---NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFK 312 (822)
Q Consensus 236 l~~~~g~s---~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~ 312 (822)
+.++++++ ..+.+++.+++.++.+++++++|+++||+|||++++++.++.+++.++.+++++++.++++|++.|++.
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~ 194 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGI 194 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhc
Confidence 44478998 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 313 HT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 313 g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
+. .+...+++.|++|++.| +.++...++.+|.+++|.+++.+. +||+.+++.+++.++..+.. +++||+++
T Consensus 195 ~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~-~~~~esp~ 268 (505)
T TIGR00898 195 GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLS-WFVPESPR 268 (505)
T ss_pred cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHH-HhcCCChH
Confidence 86 89999999999997555 577788888999999998887663 49999999988877666554 67787654
No 79
>KOG1330|consensus
Probab=99.80 E-value=3.8e-19 Score=193.42 Aligned_cols=175 Identities=16% Similarity=0.307 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+++...+....-+.+....+ -.++.+|++.+..|++.+.+.+.+++++|++|+++|||.||+++.+|..++.++.+.++
T Consensus 38 l~~vnlmny~Dr~~iagv~~-~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~ 116 (493)
T KOG1330|consen 38 LCLVNLMNYADRYTIAGVLK-EVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASG 116 (493)
T ss_pred HHHHHHHHHhhhhhhhhhhH-HHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHH
Confidence 33344444443344344444 46678999999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
++..+|++.++|.+.|+|.+. .++++++++|.+|. |.|.+++++++..+|..+|.+.++.+......|||.|++.++
T Consensus 117 fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~av 196 (493)
T KOG1330|consen 117 FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAV 196 (493)
T ss_pred HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehH
Confidence 999999999999999999986 89999999999986 666799999999999999999999998876459999999999
Q ss_pred HHHHHHHHHhhhcccCCCC
Q psy3157 371 LFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 371 ~~li~~ll~~~~~~e~~~~ 389 (822)
+.+++.++..++.+|+++.
T Consensus 197 l~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 197 LGVIVGLLVFLFVREPERG 215 (493)
T ss_pred HHHHHHHHHHhhccCcccc
Confidence 9999999988888887754
No 80
>KOG2533|consensus
Probab=99.79 E-value=1.2e-18 Score=198.57 Aligned_cols=154 Identities=18% Similarity=0.175 Sum_probs=138.2
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-h
Q psy3157 237 RTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-Q 315 (822)
Q Consensus 237 ~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~ 315 (822)
.++.+....+.+++.+++.++++++.+++|.|.||++-.+.+....+++++..++....+|++.+++.|++.|+++++ +
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGW 152 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccc
Confidence 356788889999999999999999999999999999988888888888988888888899999999999999999986 9
Q ss_pred hHHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHHHHHHHh-----cccchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 316 VLCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVIH-----YENGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 316 ~~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~~-----~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
|....+++.|+.+++|+ +|++....++|.++|.+++..+.+ ...||||.|++.|++.++..++.++++|+.|.
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999999886665 899999999999999999988753 12489999999999999999998999998776
Q ss_pred Cc
Q psy3157 389 YP 390 (822)
Q Consensus 389 ~~ 390 (822)
+.
T Consensus 233 ~~ 234 (495)
T KOG2533|consen 233 KA 234 (495)
T ss_pred hc
Confidence 43
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.78 E-value=2.2e-16 Score=182.58 Aligned_cols=161 Identities=15% Similarity=0.155 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL-YGRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~~~~ll~~i~~ll 291 (822)
.+.+..+...++++...+.++.|+++++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.++++++.++
T Consensus 18 ~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~ 97 (489)
T PRK10207 18 MIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFM 97 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 56667788889999999999999999999999999999999998888889999999999 99999999999999999999
Q ss_pred HHhhchHHH-HHHHHHHhhcccch-hhHHHHHHHHhcccc----chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 292 LGLYKSVYV-IFFVRILLGLFKHT-QVLCKAYISDICVDS----TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 292 ~~~a~s~~~-l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~----~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
++++.+... ++++|+++|+|.|. .+...++++|++|++ .++++++..+.++|.++||.+++++.+.. |||+.|
T Consensus 98 ~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~~F 176 (489)
T PRK10207 98 TGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSVTY 176 (489)
T ss_pred HHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHHHH
Confidence 998876444 55789999999986 788899999999864 23688999999999999999999999987 999999
Q ss_pred HHHHHHHHH
Q psy3157 366 CMTSALFVV 374 (822)
Q Consensus 366 ~i~~~~~li 374 (822)
++.++..++
T Consensus 177 ~i~~i~~~~ 185 (489)
T PRK10207 177 NLCGAGLII 185 (489)
T ss_pred HHHHHHHHH
Confidence 986654333
No 82
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.78 E-value=1.8e-17 Score=191.02 Aligned_cols=147 Identities=18% Similarity=0.260 Sum_probs=119.1
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch
Q psy3157 235 YLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT 314 (822)
Q Consensus 235 ~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~ 314 (822)
++..++|-+ ....|+.+...++..++.++.|+++|.+|||++++.+.++..++.++++.++|...++++..+.|+|.|.
T Consensus 69 ~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~ 147 (599)
T PF06609_consen 69 YINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGV 147 (599)
T ss_pred HHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHH
Confidence 555678865 5667999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhHHHHHHHHhccccchHHHH--HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhc
Q psy3157 315 QVLCKAYISDICVDSTKAFSQ--LMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVV 383 (822)
Q Consensus 315 ~~~~~~~i~e~~p~~~ra~g~--~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~ 383 (822)
.......++|..|.|.|..+. ......+...++|.++..+.... +|||.|++.+++..+.+++.+++.
T Consensus 148 ~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~-~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 148 QELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHS-GWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCC-CcchHHHHHHHHHHHHHHHHHHHh
Confidence 555667789999988886444 33333334446777777665553 999999999998877776644443
No 83
>KOG3764|consensus
Probab=99.78 E-value=1.7e-18 Score=184.33 Aligned_cols=147 Identities=20% Similarity=0.307 Sum_probs=135.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhH
Q psy3157 239 QVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVL 317 (822)
Q Consensus 239 ~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~ 317 (822)
..+-..+++|++.+...+.+.+..++.|.+.||+|+|..+++|++++...++++++..++++++++|.++|+|.++ .+.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 3566778999999999999999999999999999999999999999999999999999999999999999999997 888
Q ss_pred HHHHHHHhccc---cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccC
Q psy3157 318 CKAYISDICVD---STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 318 ~~~~i~e~~p~---~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~ 386 (822)
..++++|.+|+ |++++|+.-.+.++|..+||++||.+.+.. |.+..|.+++++.++...+.++.++.+
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 89999999986 356799999999999999999999999997 999999999999999888866665543
No 84
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.78 E-value=1e-16 Score=182.55 Aligned_cols=175 Identities=17% Similarity=0.218 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCChHHHHHH-HHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD----LYGRKTILLTC-LFTCIV 287 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD----r~Grr~~l~~~-~ll~~i 287 (822)
.++...+...+++....+.++.|++ .+|.+....+++..+..+..++.+|++|+++| |+|||+.++++ .+...+
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH
Confidence 3556666667888888899988876 49999999999999999999999999999999 59999998864 666666
Q ss_pred HHHHHHhhchHH-----------------HHHHHHHHhhcccch-hhHHHHHHHHhccccc----hHHHHHHHHHHHHHH
Q psy3157 288 SYLLLGLYKSVY-----------------VIFFVRILLGLFKHT-QVLCKAYISDICVDST----KAFSQLMMVTFLGFF 345 (822)
Q Consensus 288 ~~ll~~~a~s~~-----------------~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~----ra~g~~~~~~~iG~~ 345 (822)
+.++.+++.++. .++++..+..++... .++..++++|.+|++. ++.++.+.+.++|.+
T Consensus 87 ~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i 166 (477)
T TIGR01301 87 AVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV 166 (477)
T ss_pred HHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 667777765542 222233334445554 7788999999998743 368889999999999
Q ss_pred HHHHHHHHHH--hcc------------cchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 346 IGPAIGGHVI--HYE------------NGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 346 igp~l~g~l~--~~~------------~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
+|+.++++.. ... .+.+++|++.+++.++..++..+..+|.+.
T Consensus 167 lg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 167 LGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 9999998752 111 157889999998888888888888887653
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.77 E-value=9.9e-18 Score=191.37 Aligned_cols=170 Identities=18% Similarity=0.238 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCCh-HHHHHHHHHHHHHHHH
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL----YGRK-TILLTCLFTCIVSYLL 291 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr----~Grr-~~l~~~~ll~~i~~ll 291 (822)
+.+..........++++.|+.+.+|++..++|++.++..+..++..|+.|+++|| +||| +.++++.+.++++.++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 3445556667777888888888899999999999999999999999999999998 6774 4666788888877777
Q ss_pred HHhhch------HHHHHHHHHHhhcccch-hhHHHHHHHHhcc-cc--chHHHHHHHHHHHHHHHHHHHHHHHHhc----
Q psy3157 292 LGLYKS------VYVIFFVRILLGLFKHT-QVLCKAYISDICV-DS--TKAFSQLMMVTFLGFFIGPAIGGHVIHY---- 357 (822)
Q Consensus 292 ~~~a~s------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~---- 357 (822)
+.+.++ ...+++.+++.+++.+. .++..++..|+.+ ++ .+..++.+.+..+|..+++.+.+.+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~ 166 (437)
T TIGR00792 87 LFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGG 166 (437)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 766543 45566677788887775 5666788888874 34 4457777777888887777766665532
Q ss_pred --ccchHHHHHHHHHHHHHHHHHHhhhcccC
Q psy3157 358 --ENGFFYICCMTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 358 --~~gw~~~f~i~~~~~li~~ll~~~~~~e~ 386 (822)
..+|++.+++.+++.++..++.++..+|.
T Consensus 167 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 167 DDKFGWFMFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 13899999999988887776656666654
No 86
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.77 E-value=1.9e-16 Score=167.70 Aligned_cols=160 Identities=18% Similarity=0.138 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
..+-.......+.|.++. +++++|+|.+..|+++++..+...+.+++..+++.|+|..+.+..++++.+++.++-...
T Consensus 20 ia~NLR~~itsvgPLL~~-Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~- 97 (395)
T COG2807 20 IAFNLRPAITSVGPLLDE-IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG- 97 (395)
T ss_pred HHhccchhhhhhhhhHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-
Confidence 333344556667788775 666799999999999999999999999999999999999999999999999999988777
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS-TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVV 374 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~-~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li 374 (822)
+.+.++.+..+.|.|.+. ....++++-+.||+| ...+|+|....++|.++++.+.-.+.+...|||....+.+.+.++
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all 177 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL 177 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence 888899999999999996 888899999999987 567999999999999999999988888766899999998888887
Q ss_pred HHHH
Q psy3157 375 NFVY 378 (822)
Q Consensus 375 ~~ll 378 (822)
.+++
T Consensus 178 Al~~ 181 (395)
T COG2807 178 ALLI 181 (395)
T ss_pred HHHH
Confidence 7765
No 87
>KOG0253|consensus
Probab=99.77 E-value=4.3e-17 Score=171.23 Aligned_cols=173 Identities=14% Similarity=0.074 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
...+....+.+-... ...+..-+...+|.+..+..++....+.++.+++..||.++|++|||+.+.+..+..++..++.
T Consensus 82 ~ag~gwmad~m~~m~-~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is 160 (528)
T KOG0253|consen 82 VAGMGWMADAMEMML-LSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVIS 160 (528)
T ss_pred HhhhHHHHHHHHHHH-HHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhh
Confidence 444455544443333 3333334666789999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHhhcccchhhHHHHHHHHhccccchH-HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHTQVLCKAYISDICVDSTKA-FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~~ra-~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
++++|+..+++.|.+.|+|.|+.|...++-.|..|..+|. ..+....+.+|.++...++..++.++ ||||.....+..
T Consensus 161 ~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~-gwr~~l~~~~~p 239 (528)
T KOG0253|consen 161 GASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNF-GWRYLLFTSSTP 239 (528)
T ss_pred cCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHhH
Confidence 9999999999999999999998899999999999976664 44445889999999999999999998 999998887765
Q ss_pred HHHHHHHHhhhcccCCC
Q psy3157 372 FVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 372 ~li~~ll~~~~~~e~~~ 388 (822)
..+.+++ .+++||+++
T Consensus 240 l~~~a~f-~~w~~ESpR 255 (528)
T KOG0253|consen 240 LMFAARF-LVWVYESPR 255 (528)
T ss_pred HHHHHHH-HhhcccCcc
Confidence 5555444 567788776
No 88
>PTZ00207 hypothetical protein; Provisional
Probab=99.75 E-value=3.1e-15 Score=173.83 Aligned_cols=154 Identities=12% Similarity=0.047 Sum_probs=126.4
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh------chHHHHHH
Q psy3157 230 PLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY------KSVYVIFF 303 (822)
Q Consensus 230 ~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a------~s~~~l~i 303 (822)
..+...+++++|++..+++++.++. ....+++++.|+++||+|+|++++++.++++++.++++++ .+++.+++
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 3444457778999999999998774 4455678889999999999999999999999999999987 68999999
Q ss_pred HHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh
Q psy3157 304 VRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFI-GPAIGGHVIHYENGFFYICCMTSALFVVNFVYTY 380 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~i-gp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~ 380 (822)
.|++.|+|.+. .+.....+.+|+|+ |+++.|+...+.++|.++ +++..+++ .. +|++.|++.+++.++..++.+
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~-~~--~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFF-SD--NTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--hHHHHHHHHHHHHHHHHHHHH
Confidence 99999999885 77788888999985 677899999999999875 55555544 32 788899999988888877777
Q ss_pred hhcccCC
Q psy3157 381 WVVTDVK 387 (822)
Q Consensus 381 ~~~~e~~ 387 (822)
++++.++
T Consensus 203 ~~vr~p~ 209 (591)
T PTZ00207 203 VFMRLPP 209 (591)
T ss_pred hheeCCc
Confidence 7666543
No 89
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.75 E-value=2.5e-16 Score=177.36 Aligned_cols=168 Identities=13% Similarity=0.075 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH--HHHHHHHHHHHHHHHH-HHHhhhCChHHHHHHHHHH-HHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAI--ASTFSLLQIISAPTVG-YLSDLYGRKTILLTCLFTC-IVS 288 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~--~s~~~l~~~ig~~~~G-~LsDr~Grr~~l~~~~ll~-~i~ 288 (822)
.+...++......+...|.+|.++++ .|.+..++|++ .++..+...+.+|+++ +.+||+|||+.+++.+.+. ++.
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH
Confidence 45566777788889999999998886 79999999997 4667888888888884 4799999999876554332 212
Q ss_pred HHHHH-h--hch-HHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q psy3157 289 YLLLG-L--YKS-VYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGF 361 (822)
Q Consensus 289 ~ll~~-~--a~s-~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw 361 (822)
..... + ..+ ...++...++.+++.+. -+...++..|..+++.+ ..+....+..+|.++|+.+.+++.+.. ||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~-gw 162 (390)
T TIGR02718 84 LASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF-GQ 162 (390)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CH
Confidence 22222 1 222 22333333334444443 44555666676665544 355566677888888888888888887 99
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q psy3157 362 FYICCMTSALFVVNFVYTYWV 382 (822)
Q Consensus 362 ~~~f~i~~~~~li~~ll~~~~ 382 (822)
|..|++.+++.++..+..++.
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 999999998887766664443
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.75 E-value=3.2e-15 Score=173.72 Aligned_cols=164 Identities=16% Similarity=0.163 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL-YGRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~~~~ll~~i~~ll 291 (822)
.+.+..++..++.+...++++.|+++++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 55667788888888888999999998999999999988888776666667899999999 59999999999999999888
Q ss_pred HHhhc-hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc-c---hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 292 LGLYK-SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS-T---KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 292 ~~~a~-s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~-~---ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
+++++ +.+.+++++++.|+|.|. .+...+++++++|++ . +++++++.+.++|.++||+++|++.+.. |||+.|
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~~F 183 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSVAF 183 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHHHH
Confidence 88874 566677889999999986 677789999999752 2 2578889999999999999999999987 999999
Q ss_pred HHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFV 377 (822)
Q Consensus 366 ~i~~~~~li~~l 377 (822)
++.++..++..+
T Consensus 184 ~i~~i~~~i~~i 195 (500)
T PRK09584 184 ALSVVGMLITVV 195 (500)
T ss_pred HHHHHHHHHHHH
Confidence 998765555443
No 91
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.5e-16 Score=171.04 Aligned_cols=164 Identities=19% Similarity=0.166 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
++...++..+.....-+.+| .+++.++++..+.+++..+++.++.+++++.|++.+|+|+|..+++|+.++++++.++.
T Consensus 18 ~t~lFfl~G~~~~l~diLip-~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~ 96 (422)
T COG0738 18 LTSLFFLWGFITCLNDILIP-HLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW 96 (422)
T ss_pred HHHHHHHHHHHhhcchhhHH-HHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 33444444555555556666 47778999999999999999999999999999999999999999999999999999985
Q ss_pred ---hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhc----------
Q psy3157 294 ---LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHY---------- 357 (822)
Q Consensus 294 ---~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~---------- 357 (822)
...++..++++.++.|.|.|. .+.+..+++.+.++ +.+-+++.+...++|.++||++++.++.+
T Consensus 97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422)
T COG0738 97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence 456888899999999999997 88899999999987 45568999999999999999999988773
Q ss_pred --------ccchHHHHHHHHHHHHHHHHH
Q psy3157 358 --------ENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 358 --------~~gw~~~f~i~~~~~li~~ll 378 (822)
...|++.|...+.+.++..+.
T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~ 205 (422)
T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVL 205 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 123666676666655544443
No 92
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.73 E-value=2.2e-16 Score=175.41 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChHHH-HHHHHHHHHHHHHHHhh---c
Q psy3157 226 SLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-----GRKTIL-LTCLFTCIVSYLLLGLY---K 296 (822)
Q Consensus 226 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-----Grr~~l-~~~~ll~~i~~ll~~~a---~ 296 (822)
+...+.+|.+++ ++|+|.+++|++... .+...+ .+++|+++||+ |||+.+ +.+.++.++..++.++. .
T Consensus 5 ~~~~~~~~~~~~-~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 5 GLVGNTLPYWLR-SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred hhHHhHHHHHHH-HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 345566666665 589999999999655 555554 89999999998 898874 56777777776676676 4
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------hHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENG--------FFYIC 365 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~g--------w~~~f 365 (822)
+++.+.+..++.+++.+. .++..+++.|++|++ +++.++...+..+|.++++.+++.+.+.. | ||+.|
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~~~~~~wr~~f 160 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANTGLITLWGYIF 160 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccccHHHH
Confidence 566666677777777665 688899999999865 45688889999999999999999998776 6 99999
Q ss_pred HHHHHHHHHHHHHHhhhccc
Q psy3157 366 CMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 366 ~i~~~~~li~~ll~~~~~~e 385 (822)
++.+++.++..+..++..||
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 99888777765554444555
No 93
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.73 E-value=3.7e-16 Score=175.53 Aligned_cols=173 Identities=23% Similarity=0.364 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG-RKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G-rr~~l~~~~ll~~i~~ll 291 (822)
-++..+++..+..+...|+++.|+++ .|+|..|+|.+.++..+..+++++++|.++||++ +|+++.+..++.++..+.
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 34556777778888899999999987 7999999999999999999999999999999986 567777777777777777
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHH-HHHHHhcc--cchHHHHHH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAI-GGHVIHYE--NGFFYICCM 367 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l-~g~l~~~~--~gw~~~f~i 367 (822)
....++++.+++..++..++..+ .|...++..+...++.+-+|-...+.++|.+++... ++.+.... .+..+.+++
T Consensus 85 ~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 85 LAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 77788888888888777777664 777777777777655555677777777887777544 23333222 122345555
Q ss_pred HHHHHHHHHHHHhhhcccCC
Q psy3157 368 TSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 368 ~~~~~li~~ll~~~~~~e~~ 387 (822)
.+++.++.... .+.+|+.+
T Consensus 165 ~~~~~~ll~~~-~l~lp~~~ 183 (400)
T PF03825_consen 165 AAILSLLLAGF-ALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHH-HHhCCCCc
Confidence 55544333322 34456554
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.71 E-value=2.3e-15 Score=167.35 Aligned_cols=157 Identities=17% Similarity=0.240 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFT-IGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRI 306 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~-~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~ 306 (822)
..|+...++.+++|++..+ .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++..++.++++++..+.+.|+
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ 123 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEV 123 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445777789999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH--HHHHHHHHHHhh
Q psy3157 307 LLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS--ALFVVNFVYTYW 381 (822)
Q Consensus 307 l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~--~~~li~~ll~~~ 381 (822)
+.|++.|+ + +...++..|+|+ |+|+.|+++.+..+|.++++++++++. .+ |||+.+...- ....+.++++.+
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~-gWr~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL-GWISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-CchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 6 899999999997 456799999999999999999999944 44 8987654332 222233334456
Q ss_pred hcccCC
Q psy3157 382 VVTDVK 387 (822)
Q Consensus 382 ~~~e~~ 387 (822)
++|..+
T Consensus 201 ~LP~~~ 206 (511)
T TIGR00806 201 FLKRPK 206 (511)
T ss_pred hCCCCc
Confidence 777433
No 95
>KOG0569|consensus
Probab=99.70 E-value=1.3e-15 Score=171.76 Aligned_cols=141 Identities=21% Similarity=0.347 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHhhcccch-hhHHHHHH
Q psy3157 247 IGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL---YKSVYVIFFVRILLGLFKHT-QVLCKAYI 322 (822)
Q Consensus 247 ~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~---a~s~~~l~i~r~l~Gig~g~-~~~~~~~i 322 (822)
.+.+++++.+|.++|+.+.|+++||+|||..+.++.++..++.+++.+ .+++.+++++|++.|+..|. ....+.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 456788899999999999999999999999999988888877777766 46889999999999999996 88889999
Q ss_pred HHhccccchH--HHHHHHHHHHHHHHHHHHHH-HHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 323 SDICVDSTKA--FSQLMMVTFLGFFIGPAIGG-HVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 323 ~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g-~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
.|..|.+-|+ ..+..++..+|.++|..++. .+......|++.+.+..++.++.+++ ..++||+|+
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk 209 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPK 209 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcc
Confidence 9999987774 44456667777777755543 23333347999998888877766555 677899886
No 96
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.70 E-value=6e-16 Score=171.21 Aligned_cols=369 Identities=18% Similarity=0.226 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH--HHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCL--FTCIVSYL 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~--ll~~i~~l 290 (822)
..+...+...+.++...|+++.++++..|++.+++|.+.++..+...+.+|+.|.++||+|.|+-++..+ ++...+.+
T Consensus 11 ~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pf 90 (412)
T PF01306_consen 11 WLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPF 90 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 4556677777889999999999999888999999999999999999999999999999999665444332 22111222
Q ss_pred HH-Hhh----chHH-HHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q psy3157 291 LL-GLY----KSVY-VIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 291 l~-~~a----~s~~-~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~ 363 (822)
.. .+. .|.+ ..+++.+..|++..+ .++.-+++.++....+--+|-..++.++|.+++..++|.+.+. +-..
T Consensus 91 f~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~ 168 (412)
T PF01306_consen 91 FIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNI 168 (412)
T ss_dssp HHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccH
Confidence 21 121 2322 222333333443332 4554555544433333348888999999999999999999876 4567
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHH
Q psy3157 364 ICCMTSALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGL 443 (822)
Q Consensus 364 ~f~i~~~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 443 (822)
.||+..+..++..++.++..|+.+++.......
T Consensus 169 ~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~----------------------------------------------- 201 (412)
T PF01306_consen 169 IFWIASAAAIILLLLLLLLKPDVPPQAEVADAL----------------------------------------------- 201 (412)
T ss_dssp HHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc-----------------------------------------------
Confidence 888766665555544344433322211110000
Q ss_pred HHHHhhhcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCC
Q psy3157 444 VSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPA 523 (822)
Q Consensus 444 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (822)
..++++.
T Consensus 202 -------------------------------------------------------------~~~~~~~------------ 208 (412)
T PF01306_consen 202 -------------------------------------------------------------GAKKDKV------------ 208 (412)
T ss_dssp -------------------------------------------------------------SS-----------------
T ss_pred -------------------------------------------------------------ccCCCCC------------
Confidence 0000000
Q ss_pred cccCCCCCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHh
Q psy3157 524 FSLESSDVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSL 603 (822)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 603 (822)
+ .+... ..+..+.+|.+.++..........
T Consensus 209 ------------------------------------------~-----~~~~~---~l~k~~~fw~~~l~v~g~~~~Y~v 238 (412)
T PF01306_consen 209 ------------------------------------------S-----LKDVL---SLFKMRNFWFFVLFVIGVAAIYDV 238 (412)
T ss_dssp ------------------------------------------------HHHHH---HHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------c-----HHHHH---HHhcchhHHHHHHHHHHHHHHHHH
Confidence 0 00000 011123457776666666667777
Q ss_pred hhhhhHHhhhccc---CCCccceeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy3157 604 FYSNYISVLTHNF---HANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLL 678 (822)
Q Consensus 604 ~~~~~~~~l~~~~---g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 678 (822)
+...++.|.+..+ +.+.+..|++.++.-+..++...+.. +.+.+.++.+..+.+++++=.+..++.++.+...+.
T Consensus 239 fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~ 318 (412)
T PF01306_consen 239 FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLI 318 (412)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHH
Confidence 7767888877654 45556688888888888888888888 555588888888888888887787877777655544
Q ss_pred HHhhh-ccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccch
Q psy3157 679 LVSCK-KFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSN 757 (822)
Q Consensus 679 ~~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 757 (822)
-.+-+ .+. .. .++.+-++.+....+...+
T Consensus 319 klLH~~e~~------l~--------------------------------------------lva~fkYI~~~fd~rlsAt 348 (412)
T PF01306_consen 319 KLLHALEFP------LL--------------------------------------------LVAAFKYITAHFDKRLSAT 348 (412)
T ss_dssp HHHHHHHHH------HH--------------------------------------------HHHHHHHHHHHS-GGGHHH
T ss_pred HHHHHHHHH------HH--------------------------------------------HHHHHHHHHHhCCHhHHHH
Confidence 33211 100 00 0111112222222233235
Q ss_pred hhhHH-HHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 758 ISGIY-NSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 758 ~~Gi~-~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
.+.+. ++..++|.++.++++|+++|..| +...|++.+++.++..++
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G--~~~tylimg~iv~~~~li 395 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIG--FQHTYLIMGLIVLPFTLI 395 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcC--cHHHHHHHHHHHHHHHHH
Confidence 77774 67789999999999999999987 333343333333333333
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.68 E-value=3.8e-16 Score=185.68 Aligned_cols=162 Identities=13% Similarity=0.192 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc-------
Q psy3157 224 AASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK------- 296 (822)
Q Consensus 224 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~------- 296 (822)
..++..+.++. ++++|+++..+.|++.+.+.++++++.++.|++.||+|||+.+.++.++++++.+++++++
T Consensus 48 ~~g~~~~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~ 126 (633)
T TIGR00805 48 YNGLVNSSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYS 126 (633)
T ss_pred HHHHHHhhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcc
Confidence 34455555554 5667999999999999999999999999999999999999999999999999999987753
Q ss_pred --------------------------------------------hHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch
Q psy3157 297 --------------------------------------------SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK 331 (822)
Q Consensus 297 --------------------------------------------s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r 331 (822)
.+..++++|+++|+|.+. ++...+++.|++|++.|
T Consensus 127 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~ 206 (633)
T TIGR00805 127 YSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNS 206 (633)
T ss_pred ccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcccc
Confidence 245677899999999986 88899999999997554
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------cchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 332 --AFSQLMMVTFLGFFIGPAIGGHVIHYE---------------------NGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 332 --a~g~~~~~~~iG~~igp~l~g~l~~~~---------------------~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
.+|++..+..+|.++|+++++++.+.+ ++|+..|++.+++.++.+++ ++++|+..
T Consensus 207 ~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~l 284 (633)
T TIGR00805 207 PLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKAL 284 (633)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCcccc
Confidence 589999999999999999999988643 13777788888887776655 44555543
No 98
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.65 E-value=4.1e-13 Score=153.74 Aligned_cols=165 Identities=12% Similarity=0.162 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-GRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-Grr~~l~~~~ll~~i~~ll 291 (822)
.+++..+...++.+....+++.|+.+.+|++..+.+.+.+.+.+...++++++|+++||+ |||++++++.++.+++.++
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ll 92 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHH
Confidence 455566777788888888999999988999999999999999999999999999999999 9999999999999988877
Q ss_pred HHhhc-hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--ch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 292 LGLYK-SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 292 ~~~a~-s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
.+... +...++++..+.++|.|. .+...++++|.+|++ .| ++++...+.++|..++|.+++++.+.. ||++.|
T Consensus 93 l~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F 171 (493)
T PRK15462 93 LGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGF 171 (493)
T ss_pred HHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHH
Confidence 66543 223344444455556664 566678999999853 34 689999999999999999999999887 999999
Q ss_pred HHHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFVY 378 (822)
Q Consensus 366 ~i~~~~~li~~ll 378 (822)
.+.++..++.++.
T Consensus 172 ~iaaigm~l~li~ 184 (493)
T PRK15462 172 GLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 9877655444433
No 99
>KOG0252|consensus
Probab=99.64 E-value=5.7e-15 Score=160.26 Aligned_cols=177 Identities=16% Similarity=0.163 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVL-------LSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTC 285 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-------~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~ 285 (822)
+..++.+.|.+....+....+.+-.-.+| .+....+.+..+..+|.++||+++|++.|++|||+++...+++.
T Consensus 45 iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liIm 124 (538)
T KOG0252|consen 45 IAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIM 124 (538)
T ss_pred HhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHH
Confidence 45566777776666655555543332233 45667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhc-------hHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 286 IVSYLLLGLYK-------SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVI 355 (822)
Q Consensus 286 ~i~~ll~~~a~-------s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~ 355 (822)
.++++++++.. -+++++..|+++|+|.|+ +|...++.+|...++.|+ .+......+.|...|.+++-.+.
T Consensus 125 Ii~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 125 IICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred HHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 99999877742 257788899999999999 999999999999876664 34433344444444444433332
Q ss_pred ----hcc----------cchHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q psy3157 356 ----HYE----------NGFFYICCMTSALFVVNFVYTYWVVTDVKKYP 390 (822)
Q Consensus 356 ----~~~----------~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~~ 390 (822)
... .=||..+.+.++..++.+. ..+.+||+++-+
T Consensus 205 ~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly-~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 205 AIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY-FRLKMPETARYT 252 (538)
T ss_pred HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchhHH
Confidence 211 1388888776666554433 366678776543
No 100
>KOG0254|consensus
Probab=99.60 E-value=7.5e-14 Score=163.10 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHH
Q psy3157 245 FTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYIS 323 (822)
Q Consensus 245 ~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~ 323 (822)
.+.+|+.+...++..++++++|+++|++|||++++++.+++.++.+++++++|+++++++|++.|+|.|. ..+.+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 3558999999999999999999999999999999999999999999999999999999999999999996 788899999
Q ss_pred HhccccchH--HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy3157 324 DICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 324 e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~ 389 (822)
|+.|++.|+ .+..+....+|..+|..++....+...+||..+.+..+.+++..+. .+++||+|+.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~ 235 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRW 235 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHH
Confidence 999987664 6778888888888885555444332028999998888888887777 7888887754
No 101
>PF10185 Mesd: Chaperone for wingless signalling and trafficking of LDL receptor; InterPro: IPR019330 Mesoderm development candidate 2 (also known as LDLR chaperone MESD)represents a set of highly conserved proteins found from nematodes to humans. It is a chaperone that specifically assists with the folding of beta-propeller/EGF modules within the family of low-density lipoprotein receptors (LDLRs). It also acts as a modulator of the Wnt pathway, since some LDLRs are coreceptors for the canonical Wnt pathway and is essential for specification of embryonic polarity and mesoderm induction []. The final C-terminal residues, KEDL, are the endoplasmic reticulum retention sequence as it is an ER protein specifically required for the intracellular trafficking of members of the low-density lipoprotein family of receptors (LDLRs) []. The N- and C-terminal sequences are predicted to adopt a random coil conformation, with the exception of an isolated predicted helix within the N-terminal region, The central folded domain flanked by natively unstructured regions is the necessary structure for facilitating maturation of LRP6 (Low-Density Lipoprotein Receptor-Related Protein 6 Maturation) []. ; PDB: 2RQM_A 2I9S_A 3OFH_A 2KGL_A 2RQK_A 2KMI_A 3OFG_A 3OFE_B 3OFF_A.
Probab=99.59 E-value=1.4e-15 Score=143.27 Aligned_cols=110 Identities=61% Similarity=1.015 Sum_probs=100.7
Q ss_pred cccccccccccCCCChhHHHhhhhcCceEEEEEeeCCCCChhhHHHHHHHHhhhhcccccccccccccCcceeEeecCCC
Q psy3157 54 KKLSDLRLKFKDNPDPESLLKLSKKGRTLMVFVSVDGDPTRDEAESITKLWQTSLFNSHIQAERYMVEDSRAIFLFKDGS 133 (822)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (822)
|+-.++|++++|++||+++++++|||+++|+||.+.++|++++.+.++..||.++.|||.+..+|.++++|++|++++|+
T Consensus 37 r~~p~~D~skld~~~pe~~lk~sKKGktlm~FV~~~~~ps~~e~e~i~~~Wq~~L~N~hi~v~ry~Id~~r~if~~~dG~ 116 (158)
T PF10185_consen 37 RPPPPIDLSKLDPSDPESLLKMSKKGKTLMMFVKVSGDPSREETEEITKLWQTSLRNNHIEVQRYPIDDNRAIFMFKDGS 116 (158)
T ss_dssp -S-SSTHCCHCSTSS-HHHHHHH-SSSEEEEEEEESSSTTHHHHHHHHHHHHHHHHHTT-SEEEEEEETTEEEEEESSCC
T ss_pred CCCCCCChhhcCccCHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHHHHHHHHhhCCeeEEEEEEcCCEEEEEecChH
Confidence 33457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccccccccccccccccCCCCch
Q psy3157 134 QAWDAKDYLVQQERCKSVTIENKVYPGKLT 163 (822)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (822)
++++.++.+.+++++.+++.+...+++...
T Consensus 117 ~a~E~k~FL~~Q~e~~evtie~q~y~g~~~ 146 (158)
T PF10185_consen 117 QAWEAKDFLLQQDECYEVTIEGQVYPGPGK 146 (158)
T ss_dssp CHHHHHHHHHTSTTEEEEEECCCCECSSSH
T ss_pred HHHHHHHHHhcCcceeEEEECCEEecCCCc
Confidence 999999999999999999999999877763
No 102
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.58 E-value=8.9e-18 Score=192.72 Aligned_cols=144 Identities=21% Similarity=0.366 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHhhcccch-hhHHHH
Q psy3157 245 FTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK---SVYVIFFVRILLGLFKHT-QVLCKA 320 (822)
Q Consensus 245 ~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~---s~~~l~i~r~l~Gig~g~-~~~~~~ 320 (822)
.+.+++.+...+|..+|++++|+++||+|||++++++.++..++.++.++++ +++.++++|++.|++.|. .+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4578999999999999999999999999999999999999999999999999 999999999999999996 889999
Q ss_pred HHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy3157 321 YISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYE--NGFFYICCMTSALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 321 ~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~--~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~ 389 (822)
++.|..|++.| ..++.+.++.+|..++..++..+.... .+||+.+++.+++.++..+. .+++||+|+.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~w 197 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRW 197 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccce
Confidence 99999998666 467777788888888877766553332 15999999888887665444 5778998764
No 103
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.57 E-value=6.9e-14 Score=159.67 Aligned_cols=168 Identities=20% Similarity=0.287 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCChHHHH-HHHHHHHHHHHHH
Q psy3157 218 CFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD----LYGRKTILL-TCLFTCIVSYLLL 292 (822)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD----r~Grr~~l~-~~~ll~~i~~ll~ 292 (822)
.+...........++..|+.+.+|+++..+|.+..+..+..++..|+.|.++| |+|||+.++ +|.+..+++.+++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHh
Confidence 34444445555566777888889999999999999999999999999999999 899766555 6777888777777
Q ss_pred Hhh-c-------hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cch--HHHHHHHHHHHHHHHHHHHHHHHHhccc-
Q psy3157 293 GLY-K-------SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STK--AFSQLMMVTFLGFFIGPAIGGHVIHYEN- 359 (822)
Q Consensus 293 ~~a-~-------s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~- 359 (822)
... + ....+++..++..++... ..+..++..|+.+. ++| ..+.-..+..+|.++...+.+.+.+..+
T Consensus 90 f~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~ 169 (428)
T PF13347_consen 90 FSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG 169 (428)
T ss_pred hccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 655 3 223345566666777765 67778899999873 444 4666667777777766666666664432
Q ss_pred -----chHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 360 -----GFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 360 -----gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
+|++..++.+++.++..++..+..+|
T Consensus 170 ~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 170 GDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred CccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 69999999999888888777777776
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.56 E-value=1.8e-13 Score=156.92 Aligned_cols=169 Identities=20% Similarity=0.194 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCCh-HHHHHHHHHHHHHHHH
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL----YGRK-TILLTCLFTCIVSYLL 291 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr----~Grr-~~l~~~~ll~~i~~ll 291 (822)
+.+...........+++.|+.+.+|++...+|.+.++..+..++..|+.|+++|| +||| +.++++.+..+++.++
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l 96 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLL 96 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 3334444455556777788888999999999999999999999999999999998 7774 5555676777666655
Q ss_pred HHhhch------HHHHHHHHHHhhcccch-hhHHHHHHHHhcc-ccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc---
Q psy3157 292 LGLYKS------VYVIFFVRILLGLFKHT-QVLCKAYISDICV-DSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYE--- 358 (822)
Q Consensus 292 ~~~a~s------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~--- 358 (822)
....++ ++.+++..++.+++... ..+..++.+|+.+ +++| ..++...+..+|..+++.++..+....
T Consensus 97 ~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~ 176 (444)
T PRK09669 97 TFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKG 176 (444)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 544432 44555555666665544 5566788999885 3444 456666666777777766554443321
Q ss_pred ---cchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 359 ---NGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 359 ---~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.+|+..+.+.+++.++..++.++..+|
T Consensus 177 ~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 177 DEQKGYFYAMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 278888888887776666554444443
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.56 E-value=9.8e-14 Score=159.99 Aligned_cols=169 Identities=18% Similarity=0.129 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----ChHHHHHHHHHHH-H
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG-----RKTILLTCLFTCI-V 287 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G-----rr~~l~~~~ll~~-i 287 (822)
+...++..+.. +.....++.++++++|++.++++.+.+...++..+-.+ ||+++||++ ||+.++++.++.+ +
T Consensus 31 ~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~ 108 (468)
T TIGR00788 31 GLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAI 108 (468)
T ss_pred HHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHH
Confidence 33445555555 66666677788888999999999999999999988554 999999998 7787777776663 4
Q ss_pred HHHHHHhhchHHHHH-HHHHHhhcccch-hhHHHHHHHHhccccchH----HHHHHHHHHHHHHHHHHHHHHHHhcccch
Q psy3157 288 SYLLLGLYKSVYVIF-FVRILLGLFKHT-QVLCKAYISDICVDSTKA----FSQLMMVTFLGFFIGPAIGGHVIHYENGF 361 (822)
Q Consensus 288 ~~ll~~~a~s~~~l~-i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra----~g~~~~~~~iG~~igp~l~g~l~~~~~gw 361 (822)
.....+..++..... +..++.+++.+. -.+.-+++.|..+++.+. .++.....++|.++|+.++|.+.+.. +|
T Consensus 109 ~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~-~~ 187 (468)
T TIGR00788 109 LYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT-LT 187 (468)
T ss_pred HHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 333333334544444 477888888876 678889999988743222 22333345689999999999999887 99
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccC
Q psy3157 362 FYICCMTSALFVVNFVYTYWVVTDV 386 (822)
Q Consensus 362 ~~~f~i~~~~~li~~ll~~~~~~e~ 386 (822)
+..|++.+++.++..+ ..++++|+
T Consensus 188 ~~~f~~~a~l~ll~~~-~~~~~~E~ 211 (468)
T TIGR00788 188 RILFLITAALLLLQLF-VSNLSKER 211 (468)
T ss_pred chHHHHHHHHHHHHHH-HHHhcccc
Confidence 9999999888877733 34556664
No 106
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.53 E-value=3e-12 Score=146.80 Aligned_cols=356 Identities=15% Similarity=0.163 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHHHHHHHHHhh-c-hHHHHHHHHHHhhcccch-hhHHHH
Q psy3157 245 FTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILL-TCLFTCIVSYLLLGLY-K-SVYVIFFVRILLGLFKHT-QVLCKA 320 (822)
Q Consensus 245 ~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~-~~~ll~~i~~ll~~~a-~-s~~~l~i~r~l~Gig~g~-~~~~~~ 320 (822)
+..++..++..+..++..|+.|.++|+-|+|+.++ +..++..+++++..+. + +++...+..++.-++.+. .....+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888899999999999999999999766655 4455555566666553 3 344444444444455554 666788
Q ss_pred HHHHhcccc----------------------------chHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cchHHHH
Q psy3157 321 YISDICVDS----------------------------TKAFSQLMMVTFLGFFIGPAIGGHVIHYE-------NGFFYIC 365 (822)
Q Consensus 321 ~i~e~~p~~----------------------------~ra~g~~~~~~~iG~~igp~l~g~l~~~~-------~gw~~~f 365 (822)
++.|+.+++ .|..+.-.....+|+++.-++.-.+.... ...|.++
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 999988653 34455555555666666655554443222 1358888
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCccccCCCCCCCCCCCCchhhHHhhhhccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFVYTYWVVTDVKKYPTRTSLSPNGLESSDVNPLLQEEIDMDMGNDRPRDIKEERHLVIIFLSVCHLGLVS 445 (822)
Q Consensus 366 ~i~~~~~li~~ll~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 445 (822)
.+.++..++..+..++++|+.++.+..+.... ..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~----------~~------------------------------------ 263 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS----------YL------------------------------------ 263 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh----------HH------------------------------------
Confidence 88888888777777777777654211110000 00
Q ss_pred HHhhhcCCCCCCCccccccchhhhhhhhhhhhcccccccchhhhhhhhhhhccccCccccCCCCCCCcccccccCCCCcc
Q psy3157 446 CKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSFQVPFWQLHLVSRVYAFCFPHETKHKDPNLNLDLEHIVKPPAFS 525 (822)
Q Consensus 446 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (822)
....
T Consensus 264 ----------------------~~g~------------------------------------------------------ 267 (477)
T PF11700_consen 264 ----------------------RFGF------------------------------------------------------ 267 (477)
T ss_pred ----------------------HHHH------------------------------------------------------
Confidence 0000
Q ss_pred cCCCCCCcchhhhhcccCCCCCCCChhhhhhhcccccccccccchhhhhhhhhhhhchhhhhhHHHHHHHHHHHHHHhhh
Q psy3157 526 LESSDVNPLLQEEIDMDMGNDRPRDIKEERHVEKDSRARVSLSQSSFLTYCRETFNIDWSAYWGIFLIKFLYALAMSLFY 605 (822)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 605 (822)
.++.+.+++... .+....+++..++..-+...+.
T Consensus 268 --------------------------------------------~~l~~t~k~~~~--~~~~~~fLia~~l~~dg~~ti~ 301 (477)
T PF11700_consen 268 --------------------------------------------KRLWRTFKEIRK--LRQLFLFLIAYFLYSDGVNTII 301 (477)
T ss_pred --------------------------------------------HHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHH
Confidence 001111111111 1223556666777777888888
Q ss_pred hhhHHhhhcccCCCccceeeEEehhhhhccccceeee-eccc-Ccc--chhHHHHHHHH-HHHHHHH-h------hhHHH
Q psy3157 606 SNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-IDSR-NSY--SSLYYSFILLT-VSILALY-V------SVNLY 673 (822)
Q Consensus 606 ~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~-~~~--~~l~~~~~l~~-~~~~~l~-~------~~~~~ 673 (822)
.....|.++.+|++..+...+..+..+.+++|.++.| ++++ +.+ +.+....++.. +.+..+. + ..+.+
T Consensus 302 ~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~ 381 (477)
T PF11700_consen 302 SFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPW 381 (477)
T ss_pred HHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHH
Confidence 8888999999999999987777778888999999989 5555 444 33333333332 2222111 0 23334
Q ss_pred HHHHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCcc
Q psy3157 674 LFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDV 753 (822)
Q Consensus 674 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 753 (822)
.+.++.++.+.+.++ .++ .+ ..+..+-.+..+
T Consensus 382 ~f~~~a~~~G~~~G~----~qs---------------------------~s-----------------Rs~~~~LiP~g~ 413 (477)
T PF11700_consen 382 EFWVLAVLIGLFMGG----IQS---------------------------AS-----------------RSLFSRLIPPGR 413 (477)
T ss_pred HHHHHHHHHHHHhhh----HHH---------------------------HH-----------------HHHHHHhCCCch
Confidence 444444444333212 111 11 111111112222
Q ss_pred ccchhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhhheehhhhhhHHHHhh
Q psy3157 754 FGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTTRVVMMKSRRIQREM 820 (822)
Q Consensus 754 ~~~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 820 (822)
. +..+|+++...-..+++||.+.|.+.|.+| +..+.|+...++.++|+++ +...+..|.++++
T Consensus 414 e-~efFgly~i~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl~l--l~~v~~~~g~~~A 476 (477)
T PF11700_consen 414 E-AEFFGLYAITGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGLIL--LFFVDVEKGREDA 476 (477)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHH--Hhhccchhhhhcc
Confidence 2 369999999999999999999999999997 5666677777777888777 3444434444433
No 107
>KOG0255|consensus
Probab=99.53 E-value=1.3e-13 Score=161.47 Aligned_cols=147 Identities=18% Similarity=0.278 Sum_probs=128.5
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hh
Q psy3157 238 TQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QV 316 (822)
Q Consensus 238 ~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~ 316 (822)
+.++.+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.++ ..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 34667888889999999999999999999999999999999999999999999999999999999999999999976 88
Q ss_pred HHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q psy3157 317 LCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 317 ~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~ 389 (822)
....+++|+++++.|. ..+ ......++.++|++++++.. +||+.+++..++.++.+++ +++.||+++.
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rw 260 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-WFLPPESPRW 260 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-HHccCcChHH
Confidence 9999999999987775 444 56677788888888888876 7999999999988877666 5555677654
No 108
>KOG4357|consensus
Probab=99.52 E-value=1.8e-14 Score=126.19 Aligned_cols=109 Identities=48% Similarity=0.883 Sum_probs=96.1
Q ss_pred cccccccccccCCC--ChhHHHhhhhcCceEEEEEeeCC--CCChhh----HHHHHHHHhhhhcccccccccccccCcce
Q psy3157 54 KKLSDLRLKFKDNP--DPESLLKLSKKGRTLMVFVSVDG--DPTRDE----AESITKLWQTSLFNSHIQAERYMVEDSRA 125 (822)
Q Consensus 54 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (822)
|+.-++|+++.|.. |||+++|+||||+|+|.||.+.+ .|++.+ ++.+|..||+++.|+|-+.+++...++|+
T Consensus 37 r~~~~ld~eki~~kakdpedil~mskkgktlmlfv~v~~psqp~~kd~rpftee~tqiwq~qlfn~~~dlq~fii~ddra 116 (164)
T KOG4357|consen 37 RKPAPLDFEKIDAKAKDPEDILKMSKKGKTLMLFVGVSDPSQPDEKDIRPFTEEITQIWQGQLFNAHVDLQRFIIDDDRA 116 (164)
T ss_pred CCCCCCChhhcCcccCChHHHHHHhhcCceEEEEEEecCCCCCChhhccchhHHHHHHHHHHhhccccceEEEEecCCeE
Confidence 44567888887764 69999999999999999996665 555555 48999999999999999999999999999
Q ss_pred eEeecCCCCcccccccccccccccccccccccCCCCc
Q psy3157 126 IFLFKDGSQAWDAKDYLVQQERCKSVTIENKVYPGKL 162 (822)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (822)
+||+++|+++++.++.+..++.+..++.+.+..++..
T Consensus 117 ifm~kdge~a~e~k~fll~qd~~advtiegq~f~g~g 153 (164)
T KOG4357|consen 117 IFMFKDGEQAFEAKDFLLGQDFCADVTIEGQSFDGKG 153 (164)
T ss_pred EEEEeChhHHHHHHHHhhccchheeeeecceeccCCC
Confidence 9999999999999999999999999999988877653
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.51 E-value=1e-12 Score=151.95 Aligned_cols=170 Identities=18% Similarity=0.239 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCC-hHHHHHHHHHHHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD----LYGR-KTILLTCLFTCIVSYL 290 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD----r~Gr-r~~l~~~~ll~~i~~l 290 (822)
++.+........+.++++.|+.+.+|++...+|.+..+.-+..++..|++|+++| |+|| |+.++++.+..+++.+
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 3455566677778888889999999999999999999999999999999999999 5698 5566677777777765
Q ss_pred HHHhhch------HHHHHHHHHHhhcccch-hhHHHHHHHHhcc-ccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc--
Q psy3157 291 LLGLYKS------VYVIFFVRILLGLFKHT-QVLCKAYISDICV-DSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYE-- 358 (822)
Q Consensus 291 l~~~a~s------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~-- 358 (822)
+....++ +..+++..++.+++... ..+..++..|+.+ +++| ..++-..+.++|..+++.++..+....
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~ 172 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG 172 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5544321 33444455566666654 5677788899884 4555 356656666777666655544433221
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 359 ----NGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 359 ----~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.+|+....+.+++.++..++.++..+|
T Consensus 173 ~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e 203 (473)
T PRK10429 173 GDRGFGFQMFTLVLIAFFIVSTIITLRNVHE 203 (473)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCcee
Confidence 257777777777766655554544454
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.51 E-value=6.5e-13 Score=152.59 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----CChHHH-HHHHHHHHHHHHH
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY----GRKTIL-LTCLFTCIVSYLL 291 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~----Grr~~l-~~~~ll~~i~~ll 291 (822)
+.+..........++++.|+++.+|++..++|.+.++..+..++..+++|+++||. |||+.+ .++.+...+..++
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 44455666667778888899998999999999999999999999999999999996 766654 4555544443333
Q ss_pred H-Hhh----c--hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchH--HHHHHH-----HHHHHHHHHHHHHHH
Q psy3157 292 L-GLY----K--SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKA--FSQLMM-----VTFLGFFIGPAIGGH 353 (822)
Q Consensus 292 ~-~~a----~--s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra--~g~~~~-----~~~iG~~igp~l~g~ 353 (822)
. ... . ..+.+++..++.+++.+. .++..++..++... ++|. .++-.. +..+|..++|.+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 96 VFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 211 1 223334445566766665 55666666766643 3342 333222 233455666666654
No 111
>KOG2325|consensus
Probab=99.46 E-value=2.5e-13 Score=152.20 Aligned_cols=178 Identities=22% Similarity=0.280 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRT-QVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGR-KTILLTCLFTCIVSYL 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Gr-r~~l~~~~ll~~i~~l 290 (822)
++.+..++.....+++.+..-.|+++ +.+.+.+..||+.++..++.+++++.+|+++.|.+. |+.++++.++..++.+
T Consensus 38 l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~l 117 (488)
T KOG2325|consen 38 LALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNL 117 (488)
T ss_pred HHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHH
Confidence 67777788777788777777778876 467788889999999999999999999999999995 7778899999999999
Q ss_pred HH-Hh---hc-hHHHHHHHHHHhhcccchhhHHHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Q psy3157 291 LL-GL---YK-SVYVIFFVRILLGLFKHTQVLCKAYISDIC--VDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYE----- 358 (822)
Q Consensus 291 l~-~~---a~-s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~--p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~----- 358 (822)
+. .+ .+ ..+.++++|++.|+|.|.....-+|+++.. +.|.|+++....+..+|.++||.++..+....
T Consensus 118 lY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~ 197 (488)
T KOG2325|consen 118 LYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFM 197 (488)
T ss_pred HHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceE
Confidence 88 33 33 678899999999999998888899999954 45788888877777888888888876665421
Q ss_pred -------cchHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q psy3157 359 -------NGFFYICCMTSALFVVNFVYTYWVVTDVKKYP 390 (822)
Q Consensus 359 -------~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~~ 390 (822)
+-+...-|+.+++.++.+++..++++|..++.
T Consensus 198 i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 198 ILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred EcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 12345667777777777777777787766544
No 112
>KOG4686|consensus
Probab=99.42 E-value=1.5e-13 Score=139.85 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=100.0
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHH
Q psy3157 231 LVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL-YGRKTILLTCLFTCIVSYLLLGL---YKSVYVIFFVRI 306 (822)
Q Consensus 231 ~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~~~~ll~~i~~ll~~~---a~s~~~l~i~r~ 306 (822)
.+..+++.+.+++.++..++.+.+.....+.+.++|++.|| +|-|...++-+....++.++++. .+.+|.+.++|+
T Consensus 65 alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF 144 (459)
T KOG4686|consen 65 ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRF 144 (459)
T ss_pred hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhhe
Confidence 34556666677788888899999999999999999999997 68777666555556666666544 678999999999
Q ss_pred Hhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 307 LLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 307 l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
+.|+|.-. ......+..-||.-+ .-++|+......+|..+--.+.+++.+..
T Consensus 145 ~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 145 LFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred eeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 99999854 566678888888754 34689988888888887777777776653
No 113
>PRK11462 putative transporter; Provisional
Probab=99.35 E-value=1.3e-10 Score=133.78 Aligned_cols=169 Identities=12% Similarity=0.080 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChHHHH-HHHHHHHHHHHH
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL----YGRKTILL-TCLFTCIVSYLL 291 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr----~Grr~~l~-~~~ll~~i~~ll 291 (822)
+.+........+..++..|+.+..|+++..+|.+..+.-+--++.-|+.|+++|| +|||+.++ ++.+..+++.++
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 4444455556666777778888999999999999999999999999999999996 78765554 676777777666
Q ss_pred HHhhch------HHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cch--HHHHHHHHHHHHHHHHHHHHHHHHhcc---
Q psy3157 292 LGLYKS------VYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STK--AFSQLMMVTFLGFFIGPAIGGHVIHYE--- 358 (822)
Q Consensus 292 ~~~a~s------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~--- 358 (822)
+...++ +..+++..++..++... ..+..++.+|+.+. ++| ..++...+..+|..+++.+...+....
T Consensus 97 lf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~ 176 (460)
T PRK11462 97 AYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGD 176 (460)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 554432 33445555566666654 56677888888863 444 578778888888888877766555433
Q ss_pred ---cchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 359 ---NGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 359 ---~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.+|+....+.+++.+++.++.++..+|
T Consensus 177 ~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 177 NKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 257777777777666655544433333
No 114
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.34 E-value=8.7e-12 Score=117.44 Aligned_cols=134 Identities=26% Similarity=0.432 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc
Q psy3157 251 ASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS 329 (822)
Q Consensus 251 ~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~ 329 (822)
.+.+.++..++++++|++.||+|||+.+..+..+..++.++..+.++++.+++.+++.|++.+. .+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 3456788889999999999999999999999999999988888889999999999999999886 788889999999874
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 330 --TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 330 --~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.+++++.+....+|..++|.+++.+.+.. +|++.+++.+++.++..+..++..||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 55689999999999999999999998876 89999999888877777665555554
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.34 E-value=1e-10 Score=131.15 Aligned_cols=172 Identities=19% Similarity=0.210 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChH-HHHHHHHHHHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL----YGRKT-ILLTCLFTCIVSYL 290 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr----~Grr~-~l~~~~ll~~i~~l 290 (822)
++.+...........++..|..+.+|+++..+|.+..+.=+--++.-|+.|.++|| +||++ -++++.+..++.+.
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 35666666777778888888999999999999999999999999999999999995 78655 55577788888888
Q ss_pred HHHhhc------hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cch--HHHHHHHHHHHHHHHHHHHHHHHHhcc--
Q psy3157 291 LLGLYK------SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STK--AFSQLMMVTFLGFFIGPAIGGHVIHYE-- 358 (822)
Q Consensus 291 l~~~a~------s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~-- 358 (822)
++..++ +....++...+.+++... ..+-.++.+++.+. ++| ..++-..+.++|..+...+...+....
T Consensus 99 l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 99 LLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred HHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 877765 345566667788887765 56677788888753 455 467766677777665555554444322
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 359 ----NGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 359 ----~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
.||+....+.+++..+..+.+++-.+|..
T Consensus 179 ~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 179 GDKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 37888888888887777776666555543
No 116
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.33 E-value=1.3e-10 Score=131.20 Aligned_cols=159 Identities=13% Similarity=0.211 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q psy3157 224 AASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFF 303 (822)
Q Consensus 224 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i 303 (822)
.......++|.|+++.+|++..+.+++.+...++.+++.+++|+++||+|||+.+..+.+...+........++.+.+++
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLG 310 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 34445567788888889999999999888888888889999999999999999888776666655555555677777788
Q ss_pred HHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Q psy3157 304 VRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYW 381 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~ 381 (822)
.+++.+++.|. .+....+..|.+|+ +++++++++....+|..+||.++|.+.+.. ||++.|++.+++.++.+++. +
T Consensus 311 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~~-~ 388 (393)
T PRK15011 311 LQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFCL-L 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHH-H
Confidence 88888887775 56667788899886 466789888889999999999999999987 99999998887777666553 3
Q ss_pred hcc
Q psy3157 382 VVT 384 (822)
Q Consensus 382 ~~~ 384 (822)
+.|
T Consensus 389 ~~~ 391 (393)
T PRK15011 389 RIK 391 (393)
T ss_pred hhc
Confidence 444
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.33 E-value=5.8e-10 Score=124.03 Aligned_cols=167 Identities=14% Similarity=0.185 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVL----LSNFTIGAIASTFSLLQIISAPTVGYLSDLY-GRKTILLTCLFTCIV 287 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g----~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-Grr~~l~~~~ll~~i 287 (822)
.+.+.-+..+++++.....+..|+..+++ ++.++..-+.+.|..-.-+...++||++||+ |+|+++.+|.++..+
T Consensus 25 ~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~i 104 (498)
T COG3104 25 LIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAI 104 (498)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 56678888999999999999999988888 9988887777777666667889999999995 999999999999999
Q ss_pred HHHHHHhhc--hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy3157 288 SYLLLGLYK--SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD----STKAFSQLMMVTFLGFFIGPAIGGHVIHYENG 360 (822)
Q Consensus 288 ~~ll~~~a~--s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~----~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~g 360 (822)
+.++.+.+. +...++++.++.++|.|. =+...++++|.+|+ |.++++++.++.++|+.++|++.+++.+.. |
T Consensus 105 Gh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g 183 (498)
T COG3104 105 GHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-G 183 (498)
T ss_pred HHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-C
Confidence 999999984 788999999999999996 57888999999975 234688999999999999999999999998 9
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q psy3157 361 FFYICCMTSALFVVNFVYTY 380 (822)
Q Consensus 361 w~~~f~i~~~~~li~~ll~~ 380 (822)
|...|...++-..+.++..+
T Consensus 184 ~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 184 WHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777766533
No 118
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.31 E-value=2.3e-10 Score=133.03 Aligned_cols=169 Identities=11% Similarity=0.154 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhhc
Q psy3157 220 LDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLL---LGLYK 296 (822)
Q Consensus 220 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll---~~~a~ 296 (822)
+.....+....++|.|+++.+|.+..+.++..+...++..++.+++|+++||+|||+++.++.++..++.+. ...++
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 340 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN 340 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344555566778888888778999888888888889999999999999999999999988777654433322 22245
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
+...+++++++.|++.+. ......++.|++|++.|+ +|+......+++.++|.+.+++.+..++|+..+++..++.+
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 677778888988887764 566778888999987664 66544444566788999999988765457777766666555
Q ss_pred HHHHHHhhhcccCCCC
Q psy3157 374 VNFVYTYWVVTDVKKY 389 (822)
Q Consensus 374 i~~ll~~~~~~e~~~~ 389 (822)
+.++. .+++||+++.
T Consensus 421 i~~~~-~~~~pes~~~ 435 (490)
T PRK10642 421 IGLIT-GVTMKETANR 435 (490)
T ss_pred HHHHH-HHHhccccCC
Confidence 55544 4556887664
No 119
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.30 E-value=1.8e-10 Score=138.21 Aligned_cols=138 Identities=14% Similarity=0.082 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhc
Q psy3157 248 GAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDIC 326 (822)
Q Consensus 248 g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~ 326 (822)
.+...+..++.+++.+++|+++||+|||+++++++++++++.++.+++++...+++++++.|++.++ ++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445667788899999999999999999999999999999999999988888888888888887765 788899999999
Q ss_pred ccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 327 VDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 327 p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
|.+ ++++|+.+.+..+|.++||++++.+... +...+|++.+++.++++++. +++||++.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~-~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLA-LKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHH-HhCCCCcc
Confidence 975 4568999999999999999999988775 45667777777776665553 45587654
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=2e-10 Score=130.69 Aligned_cols=162 Identities=11% Similarity=0.117 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHhcCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 225 ASLIVPLVNNYLRTQVLLS--------NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~g~s--------~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
.......++.|+.+ .|.+ ....+.+.++..++.+++.++.|+++||+|+|+++.++.++.+++.++.....
T Consensus 224 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~ 302 (418)
T TIGR00889 224 LQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD 302 (418)
T ss_pred HHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444555666654 4533 36678999999999999999999999999999999999999888876666532
Q ss_pred ----hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHH-HHHHHHHHHHHHHHHHHHhccc-----chHH
Q psy3157 297 ----SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLM-MVTFLGFFIGPAIGGHVIHYEN-----GFFY 363 (822)
Q Consensus 297 ----s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~-~~~~iG~~igp~l~g~l~~~~~-----gw~~ 363 (822)
+++.+++.+++.|++.+. .+....++.|++|++ ++++|+.+ ...++|.++||+++|.+.+..+ ||+.
T Consensus 303 ~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~ 382 (418)
T TIGR00889 303 PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQT 382 (418)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHH
Confidence 245667788999999886 677788999999975 45688886 5678999999999999998742 6999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 364 ICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 364 ~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
+|++.+++.++++++.+++++++.
T Consensus 383 ~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 383 MWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999988888888777777653
No 121
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.29 E-value=1.4e-10 Score=134.13 Aligned_cols=167 Identities=14% Similarity=0.111 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH--
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYL-- 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~l-- 290 (822)
.+++..++..........++|.|+++.+|++..+.++..+...++..++.+++|+++||+|||+.+.....+..++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 344455555555555677889999888999999999999999999999999999999999999877655444333322
Q ss_pred HHHhhchHHHHHHHHHHhhcccc-hhhHHHHHHHHhcccc--chHHHHHHHHHHH-HHHHHHHHHHHHHh----------
Q psy3157 291 LLGLYKSVYVIFFVRILLGLFKH-TQVLCKAYISDICVDS--TKAFSQLMMVTFL-GFFIGPAIGGHVIH---------- 356 (822)
Q Consensus 291 l~~~a~s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~--~ra~g~~~~~~~i-G~~igp~l~g~l~~---------- 356 (822)
.....++.+.+++.+++.|++.. ..........|.+|++ +++.|+.+...++ |.+++|.+.|++.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~ 421 (467)
T PRK09556 342 VYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFG 421 (467)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccc
Confidence 22334566667777888886543 3334446677999985 4568899888886 77999999999999
Q ss_pred --cccchHHHHHHHHHHHHHHHHHHh
Q psy3157 357 --YENGFFYICCMTSALFVVNFVYTY 380 (822)
Q Consensus 357 --~~~gw~~~f~i~~~~~li~~ll~~ 380 (822)
.. +|+..|++.+++.++++++.+
T Consensus 422 ~~~~-~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 422 YTLT-GWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred cccc-ChHHHHHHHHHHHHHHHHHHH
Confidence 33 799999998877777665543
No 122
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.29 E-value=2.8e-10 Score=126.87 Aligned_cols=154 Identities=16% Similarity=0.253 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q psy3157 225 ASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFV 304 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~ 304 (822)
.......+|.++.+++|.+..+.+++.+...+...++.+++|++.||+|||+++.++.++..+..+...+.++.+.+++.
T Consensus 215 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (375)
T TIGR00899 215 NILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLML 294 (375)
T ss_pred HHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566778877899999999998888877788889999999999999999888877766666666667788888888
Q ss_pred HHHhhcccch-hhHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 305 RILLGLFKHT-QVLCKAYISDICVDS-TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 305 r~l~Gig~g~-~~~~~~~i~e~~p~~-~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
+++.|++.|. .+....++.|..|++ ++++++++....+|..+||.++|.+.+.. ||+..|++.+++.++..++.
T Consensus 295 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 295 QLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHH
Confidence 8999998885 677778889998864 56789999899999999999999999887 89999999888877766653
No 123
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.27 E-value=4.4e-11 Score=130.47 Aligned_cols=85 Identities=14% Similarity=0.098 Sum_probs=69.7
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc------------
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE------------ 358 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~------------ 358 (822)
...+++.+++..++.|.|.+. .+....++++..+++ .|.+++.+.++++|.++||.+++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 456899999999999999997 899999999998764 45699999999999999999999887421
Q ss_pred ---cchHHHHHHHHHHHHHHHHH
Q psy3157 359 ---NGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 359 ---~gw~~~f~i~~~~~li~~ll 378 (822)
..|++.+++.+++.++..++
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 26899998777665554443
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.26 E-value=2e-10 Score=130.69 Aligned_cols=144 Identities=13% Similarity=0.101 Sum_probs=123.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHH
Q psy3157 241 LLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCK 319 (822)
Q Consensus 241 g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~ 319 (822)
+.+..+.|++.++..++..++.+++|+++||+|+|+.+.++.++.+++.++.+++++++.+++.+++.|++.+. .+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778889999999999999999999999999999999999999898888888899999988899999988875 56777
Q ss_pred HHHHHhccccchH--HHH-HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 320 AYISDICVDSTKA--FSQ-LMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 320 ~~i~e~~p~~~ra--~g~-~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.++.+.+|++.++ .+. ++....+|.++||+++|++.+.. ||+..|.+.+++.++..++.++.+++
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8899999887665 333 56778899999999999999987 89999999888887776665555544
No 125
>KOG2816|consensus
Probab=99.26 E-value=5.9e-11 Score=134.88 Aligned_cols=133 Identities=31% Similarity=0.478 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccc---hhhHHHHHHHHhccccc
Q psy3157 254 FSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKH---TQVLCKAYISDICVDST 330 (822)
Q Consensus 254 ~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g---~~~~~~~~i~e~~p~~~ 330 (822)
..+..++..+..|.++||+|||..+.+.++...+..++..+.. + ++++ +.|+..+ ......++++|....+.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~-~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-Y-WFFL---LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-H-HHhh---hcccccchhhhhhhhhhheeeccchhH
Confidence 3677888999999999999999999998888887777766655 3 3333 5555554 36788899999998766
Q ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q psy3157 331 K--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKYPTR 392 (822)
Q Consensus 331 r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~~~~ 392 (822)
| .+|+.+..+..+..++|.+++.+.... |.-.+|++.++..++..+..++++||+..++.+
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 6 488899999999999999999999986 899999999999999998888899987765433
No 126
>PRK03699 putative transporter; Provisional
Probab=99.25 E-value=2.5e-10 Score=128.92 Aligned_cols=164 Identities=15% Similarity=0.186 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.+..++.......+..++|.|+++.+|++..+.+++.+.+.++..++.+++|+++||+|||+++.....+.++..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 210 LAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 33444444455556677889999888999999999999999999999999999999999999998888777777766666
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
..++.+.+.+..++.|++.+. ++...++..+..|. +.+..+....+..+|..+||.+.|++.+.. ||+..+++.+++
T Consensus 290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~~~~~~~~~ 368 (394)
T PRK03699 290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQAALLTANGL 368 (394)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-CchhhhhhhHHH
Confidence 677777777777888887765 67777777787764 355678888888999999999999999987 899999988888
Q ss_pred HHHHHHH
Q psy3157 372 FVVNFVY 378 (822)
Q Consensus 372 ~li~~ll 378 (822)
.+++.++
T Consensus 369 ~~~~~~~ 375 (394)
T PRK03699 369 YAVVFVM 375 (394)
T ss_pred HHHHHHH
Confidence 7777654
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.25 E-value=3.7e-10 Score=123.74 Aligned_cols=164 Identities=24% Similarity=0.283 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH-HHHHHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKT-ILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~-~l~~~~ll~~i~~ll~~ 293 (822)
.+..++............+.+..+.+|.+..+.++..+...++..++.+++|++.||+|||+ .+.++.++..++.++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 260 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLA 260 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 33444555556667778888888777999999999999999999999999999999999999 99999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
..++.+.+++..++.|++.+. .+....++.|..|++ ++.+|+.+....+|..++|.+.+.+.+.. +|++.+++.++
T Consensus 261 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~ 339 (352)
T cd06174 261 LAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAA 339 (352)
T ss_pred HhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHH
Confidence 988899999999999999986 888899999999965 45689999999999999999999999876 99999999998
Q ss_pred HHHHHHHHH
Q psy3157 371 LFVVNFVYT 379 (822)
Q Consensus 371 ~~li~~ll~ 379 (822)
+.++..++.
T Consensus 340 ~~~i~~i~~ 348 (352)
T cd06174 340 LALLAALLL 348 (352)
T ss_pred HHHHHHHHh
Confidence 888776653
No 128
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.25 E-value=5.1e-10 Score=126.33 Aligned_cols=158 Identities=15% Similarity=0.113 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIF 302 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~ 302 (822)
.+.....++++.|+.+ .|.+ ..++..+.+.++..++.+++|++.||+|+|+.+.++.++.+++.++..+.++.+.++
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T PRK05122 230 IGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMAL 306 (399)
T ss_pred HHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344455666666654 4653 456677788889999999999999999999999988888888888888888888888
Q ss_pred HHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 303 FVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 303 i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
+..++.|++.+. ++.....+.+.+|++ ++++|+++....+|..++|++.|.+.+.. ||++.|++.+++.++..++.
T Consensus 307 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~ 385 (399)
T PRK05122 307 IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALT 385 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHH
Confidence 889999999885 677777788888864 56689999999999999999999999887 89999999888887776665
Q ss_pred hhhcc
Q psy3157 380 YWVVT 384 (822)
Q Consensus 380 ~~~~~ 384 (822)
+++.+
T Consensus 386 ~~~~~ 390 (399)
T PRK05122 386 WLLYR 390 (399)
T ss_pred HHhcc
Confidence 54433
No 129
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=3.4e-10 Score=123.28 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee-eccc-CccchhHHHHHHHHHHHHHHH
Q psy3157 590 IFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-IDSR-NSYSSLYYSFILLTVSILALY 667 (822)
Q Consensus 590 ~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~-~~~~~l~~~~~l~~~~~~~l~ 667 (822)
+++..++..-......+.-..|....+|++..+..++.....++++++.++.| .+++ +.++.+.++.++..+..+...
T Consensus 257 FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~ 336 (438)
T COG2270 257 FLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI 336 (438)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH
Confidence 44445555555555666667788888999999998888888889999999999 6665 555555666666655544433
Q ss_pred hhhHHHHHHHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhh
Q psy3157 668 VSVNLYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQ 747 (822)
Q Consensus 668 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (822)
+......+..+..+.+.+.+ |.++ ....+..+
T Consensus 337 ~~~~~~~f~i~gll~g~s~G----~~qA--------------------------------------------~SRSy~~~ 368 (438)
T COG2270 337 FLEGELDFWILGLLVGTSLG----GAQA--------------------------------------------SSRSYLAR 368 (438)
T ss_pred HccccHHHHHHHHHHHHhcc----hHHH--------------------------------------------HHHHHHHH
Confidence 33322222222222222221 2332 11122222
Q ss_pred cccCccccchhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 748 KCQGDVFGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 748 ~~~g~~~~~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
..+.++.+ ..+|+++...-.+.++||.+.|.+.+.||+ ....++.-+++.++|.++
T Consensus 369 lvp~~k~~-~fFglyaltgra~S~~gp~lv~v~t~iTg~-~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 369 LVPKGKEG-RFFGLYALTGRAASFLGPFLVAVITQITGS-SRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred hCCCcccc-ceeehhhhhhhHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHhhHhh
Confidence 32333444 599999999999999999999999999985 554555656666777776
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.24 E-value=7.1e-10 Score=124.90 Aligned_cols=156 Identities=16% Similarity=0.173 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH-HHHHhhchHHHHHHH
Q psy3157 226 SLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSY-LLLGLYKSVYVIFFV 304 (822)
Q Consensus 226 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~-ll~~~a~s~~~l~i~ 304 (822)
.....+++.++.+.+|.+..+.+++.+...++.+++.+++|+++||+|||.+... ..+..++. ++....++.+.++++
T Consensus 222 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~ 300 (390)
T PRK03545 222 FTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVCLLLLLPAANSEWHLSVL 300 (390)
T ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHhchHHHHHHH
Confidence 3344566667777789999999999999999999999999999999998875444 33333333 334456778888888
Q ss_pred HHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh
Q psy3157 305 RILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWV 382 (822)
Q Consensus 305 r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~ 382 (822)
.++.|++.+. .+...+.+.+..|+ +++++|+++....+|..+||+++|.+.+.. |++.+|++.+++.++++++.+..
T Consensus 301 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 301 SIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHH
Confidence 8888998764 55566777787775 566789999899999999999999999997 99999999998888777765554
Q ss_pred c
Q psy3157 383 V 383 (822)
Q Consensus 383 ~ 383 (822)
.
T Consensus 380 ~ 380 (390)
T PRK03545 380 F 380 (390)
T ss_pred c
Confidence 4
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.23 E-value=5.5e-10 Score=126.29 Aligned_cols=159 Identities=15% Similarity=0.167 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIF 302 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~ 302 (822)
........++|.++.+ .|.+..+.+++.+...++.+++.+++|+++||+|||+.+.++.+..+++.++..+.++.+.++
T Consensus 234 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T PRK11551 234 IVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGML 312 (406)
T ss_pred HHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 3344455567777765 799999999999999999999999999999999999998887777777777677777877777
Q ss_pred HHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 303 FVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 303 i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
+..++.|++.+. .+...+++.|.+|++ ++++|+.+....+|..+||.++|.+.+...+|...+++.+.+.++..++.
T Consensus 313 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 313 LAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 777888887764 777888999999875 55689999999999999999999999876567777777666666555554
Q ss_pred hhh
Q psy3157 380 YWV 382 (822)
Q Consensus 380 ~~~ 382 (822)
++.
T Consensus 393 ~~~ 395 (406)
T PRK11551 393 LLL 395 (406)
T ss_pred HHH
Confidence 433
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.22 E-value=6.9e-10 Score=125.36 Aligned_cols=163 Identities=23% Similarity=0.336 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchH
Q psy3157 222 LFAASLIVPLVNNYLRTQVLLSN---FTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSV 298 (822)
Q Consensus 222 ~~~~~~~~~~l~~~l~~~~g~s~---~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~ 298 (822)
........+.++.|+.+..+... ...+.+.++..++..++.+++|+++||+|||+++.++.++.+++.+...+.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T PRK09874 232 QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTP 311 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccH
Confidence 34445556777777766433222 234566677788888999999999999999999999988888877777777888
Q ss_pred HHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q psy3157 299 YVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVN 375 (822)
Q Consensus 299 ~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~ 375 (822)
+.+++.+++.|++.+. .+...+++.+..|++ ++.+++++....+|..+||.++|.+.+.. ||++.|++.+++.++.
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~ 390 (408)
T PRK09874 312 LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFN 390 (408)
T ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHH
Confidence 8888899999999886 777778888887764 56689999999999999999999999887 8999999999888887
Q ss_pred HHHHhhhccc
Q psy3157 376 FVYTYWVVTD 385 (822)
Q Consensus 376 ~ll~~~~~~e 385 (822)
.++.++..++
T Consensus 391 ~~~~~~~~~~ 400 (408)
T PRK09874 391 AVYSWNSLRR 400 (408)
T ss_pred HHHHHHHHHH
Confidence 7765554443
No 133
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.21 E-value=5.7e-10 Score=123.74 Aligned_cols=152 Identities=19% Similarity=0.183 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchH--HH
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSV--YV 300 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~--~~ 300 (822)
..........+.|.+ +++.+..+.+++.+...++..++++++|+++||+|||+.+.++.++.+++.++..+.++. ..
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQ-SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVL 297 (377)
T ss_pred HHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHH
Confidence 333334445555554 589999999999999999999999999999999999999999988888888777766543 33
Q ss_pred HHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q psy3157 301 IFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNF 376 (822)
Q Consensus 301 l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ 376 (822)
+++..++.|++.|. .+....++.|.+|++ +++.|+++....+|..+||.++|.+.+.. ||++.|++.+++.+++.
T Consensus 298 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 298 FLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHhc
Confidence 44556777887775 666778899999874 55689999999999999999999999887 99999998887766543
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.19 E-value=1.2e-09 Score=124.29 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q psy3157 227 LIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRI 306 (822)
Q Consensus 227 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~ 306 (822)
....++|.|+++.+|.+....|++.+...++.+++.++.|++.||.++++.+..+.++.+++.++..+.++++.++++.+
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 34556777888778999999999999999999999999999999988888888888888888887788888888888888
Q ss_pred Hhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhc
Q psy3157 307 LLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVV 383 (822)
Q Consensus 307 l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~ 383 (822)
+.|++.+. .+...+++.+.+|+ +++++|++.....+|..+||.+.|.+.+.. |++..+++.+++.++..++..+.+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHhc
Confidence 88988876 56677889999986 466799999999999999999999999987 888888888877766666656666
Q ss_pred ccCCC
Q psy3157 384 TDVKK 388 (822)
Q Consensus 384 ~e~~~ 388 (822)
++.+.
T Consensus 400 ~~~~~ 404 (417)
T PRK10489 400 GELRR 404 (417)
T ss_pred ccccc
Confidence 65543
No 135
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.18 E-value=9.4e-10 Score=122.48 Aligned_cols=167 Identities=19% Similarity=0.143 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH--HHH------HHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKT--ILL------TCLFT 284 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~--~l~------~~~ll 284 (822)
...+..++..........++|.|+.+.+|.+..+.+++.+...++..++.+++|+++||+|||+ ... ++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 3444555556666677788888998889999999999999999999999999999999999986 111 11111
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhcccchhhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccc-h
Q psy3157 285 CIVSYLLLGLYKSVYVIFFVRILLGLFKHTQVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENG-F 361 (822)
Q Consensus 285 ~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~g-w 361 (822)
.++........++.+..+...++.+++.+..+...+++.|.+|++. +++|+.+....+|..++|.+.|.+.+.. | |
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~-g~~ 377 (399)
T TIGR00893 299 LSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT-GSF 377 (399)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-Cch
Confidence 1111111122234444444444444444457888899999999754 4689999999999999999999999987 6 9
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy3157 362 FYICCMTSALFVVNFVYTY 380 (822)
Q Consensus 362 ~~~f~i~~~~~li~~ll~~ 380 (822)
++.|++.+++.++..++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 378 AGALMVVAALALIGALSYL 396 (399)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9999988888777666543
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.17 E-value=2.5e-09 Score=121.06 Aligned_cols=165 Identities=21% Similarity=0.209 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILL-TCLFTCIVSYLLLG 293 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~-~~~ll~~i~~ll~~ 293 (822)
.+..++..........++|.|+++ +|.+..+.+++.+...++..++.+++|+++||+|||+.+. .+.+..+++.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 228 GMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 334444445555566778877765 8999999999999999999999999999999999888664 33333333322222
Q ss_pred h-----hchHHHHHHHHHHhhcccchhhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q psy3157 294 L-----YKSVYVIFFVRILLGLFKHTQVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCM 367 (822)
Q Consensus 294 ~-----a~s~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i 367 (822)
+ .++.+.+++..++.|++.+...+....+.+..|+ +++++|+.+....+|..+||.++|.+.+.. ||...+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~~~~~ 385 (402)
T TIGR00897 307 YIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIGVVWI 385 (402)
T ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHH
Confidence 1 3466677778888888877533345566777664 566799999999999999999999999987 99999999
Q ss_pred HHHHHHHHHHHHhh
Q psy3157 368 TSALFVVNFVYTYW 381 (822)
Q Consensus 368 ~~~~~li~~ll~~~ 381 (822)
.+++.++..++.++
T Consensus 386 ~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 386 FAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 98888777666443
No 137
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.16 E-value=2.9e-09 Score=119.56 Aligned_cols=150 Identities=16% Similarity=0.210 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q psy3157 224 AASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFF 303 (822)
Q Consensus 224 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i 303 (822)
.......++|.|+++ .|.+..+.|++.+...++.++++++.|+++||+|+|+++..+.++.+++.+... . ...++.
T Consensus 215 ~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~ 290 (381)
T PRK03633 215 VLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAP 290 (381)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHH
Confidence 344445567777775 799999999999999999999999999999999999999888777776655443 2 233344
Q ss_pred HHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q psy3157 304 VRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll 378 (822)
..++.|++.+. .+...+.+.|..|++.+ ..+.++..+++|.++||.++|++.+.. ||++.|++.+++.++..++
T Consensus 291 ~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 291 ALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHH
Confidence 56777776654 78888888898876433 467777889999999999999999987 8999999988887766544
No 138
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.16 E-value=3.2e-09 Score=119.91 Aligned_cols=173 Identities=13% Similarity=0.083 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.+..++..........++|.++.+ +|.+..+.|++.+.+.++.+++.+++|++.||+|||+.+.++..+.+++.++..
T Consensus 210 l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~ 288 (393)
T PRK09705 210 LGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFI 288 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 3334444455556667788888876 899999999999999999999999999999999999999888877777666554
Q ss_pred h-hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcc-cc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Q psy3157 294 L-YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICV-DS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMT 368 (822)
Q Consensus 294 ~-a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~ 368 (822)
. ..+...+. .++.|++.+. .+.......+.++ ++ ++.+|+.+....++..+||.+.|++.+..++|...|++.
T Consensus 289 ~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~ 366 (393)
T PRK09705 289 WLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFH 366 (393)
T ss_pred HccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence 3 33322222 3456777765 6666666677775 33 456888888899999999999999999875688888888
Q ss_pred HHHHHHHHHHHhhhcccCCCC
Q psy3157 369 SALFVVNFVYTYWVVTDVKKY 389 (822)
Q Consensus 369 ~~~~li~~ll~~~~~~e~~~~ 389 (822)
+++.++..++..++.||++.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 367 ALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred HHHHHHHHHHHHHhccccccc
Confidence 887777776666677776554
No 139
>KOG2563|consensus
Probab=99.16 E-value=6.2e-10 Score=121.79 Aligned_cols=158 Identities=12% Similarity=0.084 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc------hHH-
Q psy3157 227 LIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK------SVY- 299 (822)
Q Consensus 227 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~------s~~- 299 (822)
+....+..|.++.+| +....-|+..+|.+.+....+++-|+.|++|-|...+++..+.+++..+-..+. .++
T Consensus 62 I~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~ 140 (480)
T KOG2563|consen 62 IQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR 140 (480)
T ss_pred eeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchh
Confidence 333445557777888 777778999999999999999999999999999999999999999998876653 233
Q ss_pred -HHHHHHHHhhcccch-hhHHHHHHHHhccccchHHH--HHHHHHHHHHHHHHHHHHHHHhcc-----cchHH--HHHHH
Q psy3157 300 -VIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFS--QLMMVTFLGFFIGPAIGGHVIHYE-----NGFFY--ICCMT 368 (822)
Q Consensus 300 -~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g--~~~~~~~iG~~igp~l~g~l~~~~-----~gw~~--~f~i~ 368 (822)
..+++..+.+.+.-. .....-+..-||++++|+.+ +-.++..+|.++|.++...+.... ..|.. .|+..
T Consensus 141 ~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~ 220 (480)
T KOG2563|consen 141 PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGV 220 (480)
T ss_pred hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHH
Confidence 444555666555544 22223455668998877633 333444577777777666666543 13443 34444
Q ss_pred HHHHHHHHHHHhhhccc
Q psy3157 369 SALFVVNFVYTYWVVTD 385 (822)
Q Consensus 369 ~~~~li~~ll~~~~~~e 385 (822)
+++..+.+++..+..++
T Consensus 221 ~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 221 ECLAALLLALVLFVFTK 237 (480)
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 44444444443333333
No 140
>PRK12382 putative transporter; Provisional
Probab=99.15 E-value=2.1e-09 Score=121.14 Aligned_cols=157 Identities=14% Similarity=0.137 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHH
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIF 302 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~ 302 (822)
........+++.|+.+ .+.+. .++..+.+.++.+++++++|++.||+|+|+.+.++..+.+++.++..+.++.+.++
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (392)
T PRK12382 230 VGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVAL 306 (392)
T ss_pred HHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHH
Confidence 3344455666667765 56653 45666777888889999999999999999999999888888888888888888888
Q ss_pred HHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 303 FVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 303 i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
++.++.|++.+. .+...+.+.+.+|++ ++++|+++....+|..+||+++|++.+.. ||++.|++.+++.++..++.
T Consensus 307 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHH
Confidence 889999998886 677778888888864 45689999999999999999999999987 99999999998887777665
Q ss_pred hhhc
Q psy3157 380 YWVV 383 (822)
Q Consensus 380 ~~~~ 383 (822)
++..
T Consensus 386 ~~~~ 389 (392)
T PRK12382 386 ILSF 389 (392)
T ss_pred Hhhc
Confidence 5443
No 141
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.13 E-value=3.7e-09 Score=118.86 Aligned_cols=161 Identities=16% Similarity=0.092 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
..+..++.........++.+.|+++ +|.+..++|++.++..++.+++.+++|++.||+|+|+++.++.+..++..++.+
T Consensus 210 ~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~ 288 (382)
T TIGR00902 210 FLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG 288 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3344555556666677788888875 899999999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHH-HHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLM-MVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~-~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
++++++.+++..++.|++.|. .+....++.+. |++.+ +.++++ ...++|.++||.++|++.+.. |+ ..|++.+
T Consensus 289 ~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~ 365 (382)
T TIGR00902 289 AIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMA 365 (382)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHH
Confidence 999999999999999999996 78888899987 76544 477765 567899999999999999998 76 6677777
Q ss_pred HHHHHHHHH
Q psy3157 370 ALFVVNFVY 378 (822)
Q Consensus 370 ~~~li~~ll 378 (822)
++.++.+++
T Consensus 366 ~~~~~~~~~ 374 (382)
T TIGR00902 366 IIAAAAFFL 374 (382)
T ss_pred HHHHHHHHH
Confidence 777655443
No 142
>PRK09952 shikimate transporter; Provisional
Probab=99.13 E-value=5.5e-09 Score=119.76 Aligned_cols=166 Identities=14% Similarity=0.232 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---h
Q psy3157 219 FLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL---Y 295 (822)
Q Consensus 219 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~---a 295 (822)
+..........++.|.|+++.+|.+......+..+..+...++.+++|+++||+|||+++.++.++.+++.+.... .
T Consensus 260 ~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
T PRK09952 260 LCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA 339 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3334455556678888888889999877666666667777888999999999999999988877665554433322 2
Q ss_pred -chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH--HHH-HHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHH
Q psy3157 296 -KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA--FSQ-LMMVTFLGFFIGPAIGGHVIHYE-NGFFYICCMTS 369 (822)
Q Consensus 296 -~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra--~g~-~~~~~~iG~~igp~l~g~l~~~~-~gw~~~f~i~~ 369 (822)
++.+.+++..++.|++.+. .+...++++|.+|.+.|+ .|+ ++.+..+|+.++|.+.+++.+.. ++|+..+.+.+
T Consensus 340 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~ 419 (438)
T PRK09952 340 QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLL 419 (438)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 2344444556666777775 677889999999987774 555 34455689999999999998854 35888888877
Q ss_pred HHHHHHHHHHhhhccc
Q psy3157 370 ALFVVNFVYTYWVVTD 385 (822)
Q Consensus 370 ~~~li~~ll~~~~~~e 385 (822)
++.++.++.. +.+++
T Consensus 420 ~~~~i~~v~~-~~~~~ 434 (438)
T PRK09952 420 AGCLISAMTA-LLMKD 434 (438)
T ss_pred HHHHHHHHHH-HHccc
Confidence 7777766654 34454
No 143
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.13 E-value=1.1e-08 Score=112.03 Aligned_cols=126 Identities=11% Similarity=0.088 Sum_probs=91.9
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----ChHHHH-HHHHHHHHHHHHHHhh-----c--------h
Q psy3157 237 RTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG-----RKTILL-TCLFTCIVSYLLLGLY-----K--------S 297 (822)
Q Consensus 237 ~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G-----rr~~l~-~~~ll~~i~~ll~~~a-----~--------s 297 (822)
..|++++..-.+.+.++..+.. ...+.+|+.+|+.+ ||..++ .|.++...+..+.+++ . .
T Consensus 7 IvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 3468888888888888877765 46899999999999 887777 4555555555544432 2 2
Q ss_pred H-H--HHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q psy3157 298 V-Y--VIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 298 ~-~--~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~ 363 (822)
+ + ...+...+.|+|.+. .++..++++|..|++ .|+.++.....-+|.+++.++.|.+++.+..-|.
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL 157 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERL 157 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 2 2 223345666777775 788899999999874 5568998888899999999999998877633343
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.11 E-value=3.2e-09 Score=123.52 Aligned_cols=146 Identities=14% Similarity=0.154 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--chHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY--KSVYVIFFVR 305 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a--~s~~~l~i~r 305 (822)
...++|.|+++++|++..+.+++.+...++.+++.+++|+++||+|||+++.++.++.+++.++.... .+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 45678888887899999999999999999999999999999999999999888877666655544332 3334444444
Q ss_pred HHhhcc-cchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q psy3157 306 ILLGLF-KHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVV 374 (822)
Q Consensus 306 ~l~Gig-~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li 374 (822)
++.++. .+..+...+++.|.+|++ ++++|++.....+|..+||+++|.+.+.. ||+..+.+.++...+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHHH
Confidence 444433 333556677889999874 55688888888999999999999999987 898887665554433
No 145
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.10 E-value=4.9e-09 Score=120.63 Aligned_cols=170 Identities=13% Similarity=0.062 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHHH-HHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY--GRKTILL-TCLFTCIVSY 289 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~--Grr~~l~-~~~ll~~i~~ 289 (822)
...+..++..........++|.|+++.+|++..+.+++..++.++..++.+++|+++||+ |||.... +...+..++.
T Consensus 257 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~ 336 (452)
T PRK11273 257 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIAT 336 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHH
Confidence 344444444455556677889999988899999999999999999999999999999999 5554322 2222333333
Q ss_pred HHHHh--hchHHHHHHHHHHhhcccc-hhhHHHHHHHHhcccc--chHHHHHHHHHHHHHH-HHHHHHHHHHhcccchHH
Q psy3157 290 LLLGL--YKSVYVIFFVRILLGLFKH-TQVLCKAYISDICVDS--TKAFSQLMMVTFLGFF-IGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 290 ll~~~--a~s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~-igp~l~g~l~~~~~gw~~ 363 (822)
++..+ ..+.+.++++.++.|.+.. .......+..|.+|++ ++++|+.+....+|.. +||.++|.+.+.. ||++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~ 415 (452)
T PRK11273 337 IVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDG 415 (452)
T ss_pred HHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchH
Confidence 32222 2344444455555555432 2333445677999875 5568888887778765 5899999999987 8999
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q psy3157 364 ICCMTSALFVVNFVYTYWVV 383 (822)
Q Consensus 364 ~f~i~~~~~li~~ll~~~~~ 383 (822)
.|+++++++++++++..++.
T Consensus 416 ~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 416 GFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99988888777766654443
No 146
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.09 E-value=9.1e-09 Score=118.27 Aligned_cols=170 Identities=20% Similarity=0.284 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRK--TILLTCLFTCIVSYLLL 292 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr--~~l~~~~ll~~i~~ll~ 292 (822)
.+..++..-+...+......|..+++|++..+...+..+..+..++|++++|++.||+|.| ++++++++++.+..+..
T Consensus 287 Lia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g 366 (477)
T PF11700_consen 287 LIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYG 366 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH
Confidence 3445555566777777778889989999999999999999999999999999999999999 88888887776665555
Q ss_pred Hh--------hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q psy3157 293 GL--------YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGF 361 (822)
Q Consensus 293 ~~--------a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw 361 (822)
.+ .++.+.+++.-++.|++.|. ++..-++++++.|+. ...+|++.+..-....+||++.|.+.+..++-
T Consensus 367 ~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~ 446 (477)
T PF11700_consen 367 LFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQ 446 (477)
T ss_pred HHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 55 67888899999999999997 899999999999984 44599999999999999999999999998668
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 362 FYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 362 ~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
|+.+....++.++.+++. +.++.
T Consensus 447 r~g~~~l~~lf~~gl~ll-~~v~~ 469 (477)
T PF11700_consen 447 RYGFLFLLVLFLIGLILL-FFVDV 469 (477)
T ss_pred hhHHHHHHHHHHHHHHHH-hhccc
Confidence 999998888888777764 44443
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.09 E-value=8.6e-10 Score=127.01 Aligned_cols=161 Identities=16% Similarity=0.225 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHHH--HHHHHHHHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY--GRKTILL--TCLFTCIVSYLL 291 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~--Grr~~l~--~~~ll~~i~~ll 291 (822)
+..++...+......+++.|+.+ +|.+..+.+++.++..++.+++++++|+++||. ++|+... ++.++.+++.++
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444555677778765 799999999999999999999999999999984 3343333 334444455556
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMT 368 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~ 368 (822)
..+.++++.+++.+++.|++.+. .+...+++.|.+|++ ++++|+++...++|.++||+++|.+.+..++|++.|++.
T Consensus 327 ~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~ 406 (455)
T TIGR00892 327 CALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYAS 406 (455)
T ss_pred HHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHh
Confidence 66778888888999999999886 777889999999874 556899999999999999999999998765699999988
Q ss_pred HHHHHHHHH
Q psy3157 369 SALFVVNFV 377 (822)
Q Consensus 369 ~~~~li~~l 377 (822)
+++.+++.+
T Consensus 407 ~~~~li~~~ 415 (455)
T TIGR00892 407 GSIVVSAGL 415 (455)
T ss_pred hHHHHHHHH
Confidence 887666554
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.08 E-value=3.6e-09 Score=118.14 Aligned_cols=160 Identities=19% Similarity=0.196 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH--HH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSY--LL 291 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~--ll 291 (822)
+....++..........++|.|+++.+|.+..+.+++.+...++..++.+++|+++||+|||+.+.++..+..+.. ++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (394)
T TIGR00883 224 GLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 3344444455556667788888877899999999999999999999999999999999999998775544443332 22
Q ss_pred HHh--hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHH-HHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 292 LGL--YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQ-LMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 292 ~~~--a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~-~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
..+ .++.+.+++..++.|++.+. .++..+++.|.+|++.| ++++ ++.+..+|..++|.++|.+.+..++|++.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 304 MALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 222 24666667777888888775 78889999999997544 5666 456667899999999999999873388877
Q ss_pred HHHHHHHH
Q psy3157 366 CMTSALFV 373 (822)
Q Consensus 366 ~i~~~~~l 373 (822)
+..++..+
T Consensus 384 ~~~~~~~l 391 (394)
T TIGR00883 384 YYLAALAL 391 (394)
T ss_pred HHHHHHHH
Confidence 76665544
No 149
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.07 E-value=2.7e-09 Score=122.26 Aligned_cols=158 Identities=15% Similarity=0.183 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----hc------h
Q psy3157 229 VPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL-----YK------S 297 (822)
Q Consensus 229 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~-----a~------s 297 (822)
..+.+.++ +++|.+..+.++......++.+++.+++|+++||+|||+.+.++.++.+++.++.++ .+ +
T Consensus 304 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 304 MYYSPTIF-ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred HHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 33444444 458999888889999999999999999999999999999999888877777666652 11 2
Q ss_pred HHHHHHHHHHhh-cccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q psy3157 298 VYVIFFVRILLG-LFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVV 374 (822)
Q Consensus 298 ~~~l~i~r~l~G-ig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li 374 (822)
...+....++.+ ++.+..+....++.|.+|++ ++++|+.+....+|.+++|.+.+.+.+.. +|++.|++.+++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFFGGLNVL 461 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhHHHHHHH
Confidence 222222222222 22233456677889999875 45689999999999999999999999886 899999999988888
Q ss_pred HHHHHhhhcccCCC
Q psy3157 375 NFVYTYWVVTDVKK 388 (822)
Q Consensus 375 ~~ll~~~~~~e~~~ 388 (822)
.+++..++.||+++
T Consensus 462 ~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 462 GLIFVYFFLPETKG 475 (481)
T ss_pred HHHHHheecccCCC
Confidence 87776666676543
No 150
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.06 E-value=7.8e-09 Score=118.33 Aligned_cols=170 Identities=17% Similarity=0.145 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CC-hHHHHH---HHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY--GR-KTILLT---CLFTCIV 287 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~--Gr-r~~l~~---~~ll~~i 287 (822)
+.+..++..........++|.|+.+++|++..+.++..+.+.++..++.+++|+++||+ ++ +..... +.++..+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~ 327 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHH
Confidence 33344444445555667888898777899999999999999999999999999999999 33 332222 2221211
Q ss_pred HHHHHHhhchHHHHHHHHHHhhcccc-hhhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q psy3157 288 SYLLLGLYKSVYVIFFVRILLGLFKH-TQVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYI 364 (822)
Q Consensus 288 ~~ll~~~a~s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~ 364 (822)
+.+... ..+...+.+..++.|++.. .......++.|.+|++. +++|+.+....+|.+++|++.|++.+.. ||+.+
T Consensus 328 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~~ 405 (434)
T PRK11663 328 SLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-HWTGF 405 (434)
T ss_pred HHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-ccHHH
Confidence 111111 2233333344444454432 23334556788887654 4589999999999999999999999987 89999
Q ss_pred HHHHHHHHHHHHHHHhhhccc
Q psy3157 365 CCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 365 f~i~~~~~li~~ll~~~~~~e 385 (822)
|++.+++.++..+..+...++
T Consensus 406 f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 406 FVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999998888777665544443
No 151
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.04 E-value=2e-08 Score=116.66 Aligned_cols=159 Identities=18% Similarity=0.182 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHH
Q psy3157 220 LDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVY 299 (822)
Q Consensus 220 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~ 299 (822)
+..+....+...+|.+.++.+|.+....|++.+++.+|.++|+++.+++.+|+++++++..+.++++++.+..+++++.+
T Consensus 229 ~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~ 308 (524)
T PF05977_consen 229 LFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFW 308 (524)
T ss_pred HHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHH
Confidence 33344444556678888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q psy3157 300 VIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNF 376 (822)
Q Consensus 300 ~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ 376 (822)
..++..++.|++... .+...+.+.+..|+ ++|.++++.+....+..+|.++.|.+.+.. |.+.++.+.++..++..
T Consensus 309 ~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 309 LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 999999999998875 66777888888887 688899999999999999999999999987 89988888777665555
Q ss_pred HHH
Q psy3157 377 VYT 379 (822)
Q Consensus 377 ll~ 379 (822)
++.
T Consensus 388 ~~~ 390 (524)
T PF05977_consen 388 LIA 390 (524)
T ss_pred HHH
Confidence 543
No 152
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.04 E-value=1.5e-08 Score=113.91 Aligned_cols=155 Identities=13% Similarity=0.074 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL-YKSVYVIFFVRI 306 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~-a~s~~~l~i~r~ 306 (822)
...+++.++.+.+|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.++.+++.++... .++.+..++..+
T Consensus 218 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 218 WFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3445566777778999999999999999999999999999999999999998888877777655543 445555555666
Q ss_pred Hhhcccch-hhHHH-HHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh
Q psy3157 307 LLGLFKHT-QVLCK-AYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWV 382 (822)
Q Consensus 307 l~Gig~g~-~~~~~-~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~ 382 (822)
+.+++.+. .++.. ....+..+++.++.+..+....+|..+||.++|++.+...+|++.+.+.+++.++...+...+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 66666543 33333 333444444555555556778999999999999999865589999998877766655544333
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.03 E-value=1.9e-08 Score=110.86 Aligned_cols=170 Identities=18% Similarity=0.202 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.....+++...+.....+++.+++++..|++...++++..++.++..+|..++|+++|| +.|+.+....++.++..+..
T Consensus 215 ~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l 293 (394)
T COG2814 215 LGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLAL 293 (394)
T ss_pred HHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHH
Confidence 34455666666677777888888999999999999999999999999999999999999 88888888877766666666
Q ss_pred Hh-hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GL-YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~-a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
.+ ..+.+..++.-++.|+..+. .......+++..|+ +..+.++....+++|..+|..+||.+.+.. |+....++.+
T Consensus 294 ~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a 372 (394)
T COG2814 294 TFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGA 372 (394)
T ss_pred HHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHH
Confidence 55 45566666667776766654 44555555664444 455799999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHhhhcc
Q psy3157 370 ALFVVNFVYTYWVVT 384 (822)
Q Consensus 370 ~~~li~~ll~~~~~~ 384 (822)
++.++++++.++..+
T Consensus 373 ~l~~~a~~~~~~~~~ 387 (394)
T COG2814 373 ALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHh
Confidence 998888877655443
No 154
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.02 E-value=8.4e-09 Score=115.91 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH-HHHhhchHHHHHH
Q psy3157 225 ASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYL-LLGLYKSVYVIFF 303 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~l-l~~~a~s~~~l~i 303 (822)
......++|.|+.+++|++..+.+++.+...++.+++.++.|+++||+|||+.+.++.++.++..+ +....++.+.+.+
T Consensus 254 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (405)
T TIGR00891 254 SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGL 333 (405)
T ss_pred HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 334456677888888999999999999999999999999999999999999998887766533333 3334456666666
Q ss_pred HHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q psy3157 304 VRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCM 367 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i 367 (822)
..++.|++.+. .+...+++.|.+|++ ++++|+.+....+|..+||+++|.+.+..+.|+..+..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 66777766553 677788999999874 55689989999999999999999999987238776654
No 155
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.01 E-value=1.9e-08 Score=113.52 Aligned_cols=156 Identities=12% Similarity=0.125 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHH
Q psy3157 225 ASLIVPLVNNYLRTQV---LLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVI 301 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~---g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l 301 (822)
........+.|+.+.+ +.+....|++.++..+...++.++.|++.||+|+|+.+.++.++.++..++...+++.+.+
T Consensus 231 ~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~ 310 (396)
T TIGR00882 231 YDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEV 310 (396)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHH
Confidence 3334445666666544 5566778999999999999999999999999999999999998888888887888899988
Q ss_pred HHHHHHhhcccch-hhHHHHHHHHhccccchH--HHH-HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q psy3157 302 FFVRILLGLFKHT-QVLCKAYISDICVDSTKA--FSQ-LMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFV 377 (822)
Q Consensus 302 ~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra--~g~-~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~l 377 (822)
++..++.|++.+. ......+..+..++|.++ .+. ++....+|.+++|+++|++.+.. ||+.+|++.+++.++..+
T Consensus 311 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 311 VILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHHH
Confidence 8889999988764 445566677777776554 333 56788999999999999999987 999999999998887776
Q ss_pred HHhh
Q psy3157 378 YTYW 381 (822)
Q Consensus 378 l~~~ 381 (822)
+..+
T Consensus 390 ~~~~ 393 (396)
T TIGR00882 390 ISVF 393 (396)
T ss_pred HHHH
Confidence 6543
No 156
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.00 E-value=9.5e-09 Score=112.11 Aligned_cols=170 Identities=23% Similarity=0.261 Sum_probs=134.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q psy3157 212 HKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll 291 (822)
|.+++.++....+...+..++|.|++++|+.+..+.|.+...+.+...+..+.+|+|+||+|.++++.+....++++..+
T Consensus 221 W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 221 WLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHH
Confidence 35666777777777778888999999999999999999999999999999999999999999999999888888887777
Q ss_pred HHhhc-------hHHH----HHHHHHHhhcccchhhHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy3157 292 LGLYK-------SVYV----IFFVRILLGLFKHTQVLCKAYISDICVDS-TKAFSQLMMVTFLGFFIGPAIGGHVIHYEN 359 (822)
Q Consensus 292 ~~~a~-------s~~~----l~i~r~l~Gig~g~~~~~~~~i~e~~p~~-~ra~g~~~~~~~iG~~igp~l~g~l~~~~~ 359 (822)
..+.. +... ++...+..|+|.|. ...++..++|++ +-..|+.....++|+.+-|..-|...+..+
T Consensus 301 l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGs---vfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 301 LSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGS---VFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred HHccccccccCcchHHHHHHHHHHHHHhccCcch---heeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 76643 3333 33345555666653 344555666654 445899999999999999999999988875
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhcc
Q psy3157 360 GFFYICCMTSALFVVNFVYTYWVVT 384 (822)
Q Consensus 360 gw~~~f~i~~~~~li~~ll~~~~~~ 384 (822)
.+...|++...+.+++.++.+....
T Consensus 378 ~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 378 SYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999888887655443
No 157
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.98 E-value=4.1e-08 Score=110.38 Aligned_cols=158 Identities=13% Similarity=0.051 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
..++...........++.|+.+ .|.+..+.|++.++..++..+..++.|++.||+|+|+++.++.++.+++.++.++++
T Consensus 213 ~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T PRK11128 213 CVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT 291 (382)
T ss_pred HHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444444444455666777764 899999999999999999999999999999999999999999999888888888889
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHH-HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLM-MVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~-~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
+++.+++..++.|++.+. .+....++.+..+. +++..++++ ...++|..+||.++|.+.+.. |+ ..++..+++.+
T Consensus 292 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~-g~-~~~~~~~~~~~ 369 (382)
T PRK11128 292 ALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL-GA-GVFWVMALVAL 369 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHH
Confidence 999999999999999885 67777777776443 344567665 556778899999999999987 66 46666666655
Q ss_pred HHHH
Q psy3157 374 VNFV 377 (822)
Q Consensus 374 i~~l 377 (822)
+.++
T Consensus 370 ~~~~ 373 (382)
T PRK11128 370 PALF 373 (382)
T ss_pred HHHH
Confidence 4443
No 158
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.98 E-value=5e-08 Score=110.50 Aligned_cols=159 Identities=13% Similarity=0.029 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-----chHHH
Q psy3157 226 SLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY-----KSVYV 300 (822)
Q Consensus 226 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a-----~s~~~ 300 (822)
.......|.++.+.+|++..+.++......++..++.+++|+++||+|+|+.+.++.++.+++.++..+. .+++.
T Consensus 232 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 311 (406)
T PRK15402 232 LAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLW 311 (406)
T ss_pred HHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHH
Confidence 3344456667777789999999998888888899999999999999999999988888777776666543 35666
Q ss_pred HHHHHHHhhcccch-hhHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q psy3157 301 IFFVRILLGLFKHT-QVLCKAYISDICV-DSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 301 l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll 378 (822)
+++..++.|++.+. .+..........+ .++|..+.++....+|..+|+.+++.+.+.. ++....+..++..++.+++
T Consensus 312 ~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 312 LTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG-GNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC-chHHHHHHHHHHHHHHHHH
Confidence 77778888888875 5544444433333 3677899999999999999999999998876 6655555555444444444
Q ss_pred Hhhhccc
Q psy3157 379 TYWVVTD 385 (822)
Q Consensus 379 ~~~~~~e 385 (822)
..++.++
T Consensus 391 ~~~~~~~ 397 (406)
T PRK15402 391 VRIFLKD 397 (406)
T ss_pred HHHHhcc
Confidence 4444433
No 159
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.98 E-value=8.2e-09 Score=112.44 Aligned_cols=176 Identities=15% Similarity=0.071 Sum_probs=138.5
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHHH-HHHH
Q psy3157 207 GSLTPHKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY--GRKTILL-TCLF 283 (822)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~--Grr~~l~-~~~l 283 (822)
.....+.+++.+.+....-..+..+.|.|+.|..|+|....++..+.+-++.+.|.+++|+++||+ |||..+. +.++
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 344455788888888888888999999999999999999999999999999999999999999996 6776554 4444
Q ss_pred HHHHHHHHHHhhc--hHHHHHHHHHHhhcccc-hhhHHHHHHHHhcccc--chHHHHHHHHHHH-HHHHHHHHHHHHHhc
Q psy3157 284 TCIVSYLLLGLYK--SVYVIFFVRILLGLFKH-TQVLCKAYISDICVDS--TKAFSQLMMVTFL-GFFIGPAIGGHVIHY 357 (822)
Q Consensus 284 l~~i~~ll~~~a~--s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~--~ra~g~~~~~~~i-G~~igp~l~g~l~~~ 357 (822)
...++.+...+++ |++...++.++.|+..- ..........|..|++ +.+.|+.+.+..+ |.+.+....|++.+.
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 4444444455554 56888888899999884 4767777888999985 4568888887777 888888888888888
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhhc
Q psy3157 358 ENGFFYICCMTSALFVVNFVYTYWVV 383 (822)
Q Consensus 358 ~~gw~~~f~i~~~~~li~~ll~~~~~ 383 (822)
+ ||...|++..+.++++.++.....
T Consensus 410 ~-gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 410 W-GWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred C-CCcchHHHHHHHHHHHHHHHHHHH
Confidence 6 999999988887777766544433
No 160
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.97 E-value=7.8e-08 Score=111.88 Aligned_cols=162 Identities=16% Similarity=0.133 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhh
Q psy3157 220 LDLFAASLIVPLVNNYLRTQVLLSNFTIGAIAS-TFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL---GLY 295 (822)
Q Consensus 220 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s-~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~---~~a 295 (822)
+..........+.+.|+.+.+|++..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.++..++. +..
T Consensus 233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~ 312 (491)
T PRK11010 233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT 312 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333334444455666776679999999999874 6668999999999999999999888776655544443322 232
Q ss_pred -chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 296 -KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 296 -~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
++.+.+.+..++..++.|. .+...++..+..+++ ++.+|+.+...++|..++++++|.+.+.. ||+..|.+.+++
T Consensus 313 ~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~ 391 (491)
T PRK11010 313 DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAA 391 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHH
Confidence 3555555555665555553 555678888888874 44588888889999999999999999987 999999988888
Q ss_pred HHHHHHHHhhh
Q psy3157 372 FVVNFVYTYWV 382 (822)
Q Consensus 372 ~li~~ll~~~~ 382 (822)
.++++++..+.
T Consensus 392 ~l~~l~~~~~~ 402 (491)
T PRK11010 392 AVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHH
Confidence 87776664443
No 161
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=3.1e-08 Score=108.16 Aligned_cols=169 Identities=15% Similarity=0.217 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
..++..-+...+...-..|...++|++..++.++.....+..++|++++|+|.||+|.|+++.++.++..+.++...+..
T Consensus 260 A~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~ 339 (438)
T COG2270 260 ARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE 339 (438)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc
Confidence 34444444555555666677878999999999999999999999999999999999999999999999988888887877
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
.-..++++..+.|++.|. ++..-++.++.+|+ ++|.+|++++....+..+||.+.+.+.+.++.-|..+....++.+
T Consensus 340 ~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~ 419 (438)
T COG2270 340 GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLL 419 (438)
T ss_pred ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 777778888899999986 89999999999997 467899999999999999999999999988778888877777766
Q ss_pred HHHHHHhhhcccC
Q psy3157 374 VNFVYTYWVVTDV 386 (822)
Q Consensus 374 i~~ll~~~~~~e~ 386 (822)
+.+++ .+.+|.+
T Consensus 420 iGl~~-L~~v~~~ 431 (438)
T COG2270 420 IGLLL-LLRVKVP 431 (438)
T ss_pred hhHhh-EEeecCC
Confidence 66554 4445544
No 162
>PRK10504 putative transporter; Provisional
Probab=98.96 E-value=7.2e-08 Score=111.47 Aligned_cols=143 Identities=19% Similarity=0.207 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
...++...+........|.|++..+|.+..+.+++.....++..++.+++|++.||+|||+++.++.++.++..++..+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 268 AGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 34444444444445556667776789999999999999999988999999999999999999998888777776665553
Q ss_pred ---chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 296 ---KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 296 ---~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
.+.+.+.+..++.|++.+. .+....++.+.+|++ ++++|+.++...+|..+|+.++|.+.+..
T Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 348 ALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445566777888775 777788888888864 55689999999999999999999998765
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.95 E-value=2.4e-08 Score=114.38 Aligned_cols=171 Identities=12% Similarity=0.069 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH---HHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCI---VSYLLL 292 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~---i~~ll~ 292 (822)
+..++..........++|.|+++..|.+..+.++..+++.++.+++.+++|+++||+|+++....+..+.. ++.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 337 (438)
T TIGR00712 258 IANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVY 337 (438)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHH
Confidence 33344444445566788889988789999999999999999999999999999999964332222222211 122222
Q ss_pred Hh--hchHHHHHHHHHHhhcccc-hhhHHHHHHHHhcccc--chHHHHHHHHHHHH-HHHHHHHHHHHHhcccchHHHHH
Q psy3157 293 GL--YKSVYVIFFVRILLGLFKH-TQVLCKAYISDICVDS--TKAFSQLMMVTFLG-FFIGPAIGGHVIHYENGFFYICC 366 (822)
Q Consensus 293 ~~--a~s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG-~~igp~l~g~l~~~~~gw~~~f~ 366 (822)
.. ..+.+..++..++.|++.. ..........|.+|++ ++++|+.+....+| .++||.+.|.+.+.. ||.+.|+
T Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~~~~ 416 (438)
T TIGR00712 338 WMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFM 416 (438)
T ss_pred HhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-cchHHHH
Confidence 22 2244444444455555432 2223335677888874 45688888777776 578999999999987 8999999
Q ss_pred HHHHHHHHHHHHHhhhcccCC
Q psy3157 367 MTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 367 i~~~~~li~~ll~~~~~~e~~ 387 (822)
+.+++.+++.+..++..+|.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 417 VMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhcc
Confidence 888888777777777777654
No 164
>PRK15075 citrate-proton symporter; Provisional
Probab=98.95 E-value=5.1e-08 Score=111.63 Aligned_cols=141 Identities=20% Similarity=0.189 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH-H-H--hh
Q psy3157 220 LDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLL-L-G--LY 295 (822)
Q Consensus 220 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll-~-~--~a 295 (822)
...........+.|.|+++.+|++..+.++....+.++..++.+++|+++||+|||++++++.++..+..++ . . ..
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 328 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA 328 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344455566778888998878999999999999999999999999999999999999888765443332211 1 1 12
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHH-HHHHHHHHHHHHHHHHHHHhcccch
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQL-MMVTFLGFFIGPAIGGHVIHYENGF 361 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~-~~~~~iG~~igp~l~g~l~~~~~gw 361 (822)
+++..+.+..++.|++.+. .+....++.|.+|++.| +.|+. +.+..++..++|.+.|++.+.. |+
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~-g~ 397 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT-GD 397 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc-CC
Confidence 3444444445555666664 45566788999998655 45654 3344456778999999999886 64
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.94 E-value=1.9e-08 Score=116.59 Aligned_cols=153 Identities=18% Similarity=0.112 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh-------HHHHHHHHHHHHHHHHHHhhchH
Q psy3157 226 SLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRK-------TILLTCLFTCIVSYLLLGLYKSV 298 (822)
Q Consensus 226 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr-------~~l~~~~ll~~i~~ll~~~a~s~ 298 (822)
.....++|.|+.+.+|++..+.+++.+++.++..++.+++|+++||+||| ....+..++.++..++.+..++.
T Consensus 269 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~ 348 (476)
T PLN00028 269 LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSL 348 (476)
T ss_pred HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchH
Confidence 34455677888878899999999999999999999999999999999865 23333444444444444555666
Q ss_pred HHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q psy3157 299 YVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNF 376 (822)
Q Consensus 299 ~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ 376 (822)
+..++..++.+++.+. .+...+++.++.|+ ++.+.|+.+.+..+|..++|.+.+ .....+|+..|++.+++.+++.
T Consensus 349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~ 426 (476)
T PLN00028 349 GAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACT 426 (476)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHH
Confidence 6555555666665543 34445555565553 344567665555555555554432 1122369999999988887776
Q ss_pred HHHh
Q psy3157 377 VYTY 380 (822)
Q Consensus 377 ll~~ 380 (822)
++.+
T Consensus 427 ~~~~ 430 (476)
T PLN00028 427 LPVA 430 (476)
T ss_pred HHHH
Confidence 6643
No 166
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.92 E-value=5.1e-08 Score=107.69 Aligned_cols=129 Identities=13% Similarity=0.205 Sum_probs=112.4
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHh
Q psy3157 230 PLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKS-VYVIFFVRILL 308 (822)
Q Consensus 230 ~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s-~~~l~i~r~l~ 308 (822)
...|.+.++.+|.+..+.+++.+...++..++.++.|++.||+|||+.+..+.++.+++.++..+.++ ++.+++..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 56676777668999999999999999999999999999999999999999888888888777777764 88888889999
Q ss_pred hcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 309 GLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 309 Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
|++.+. .+...+++.|.+|++ +++.|+.+....+|..+||.++|.+.+..
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999886 778889999999875 45689999999999999999999998764
No 167
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.91 E-value=1.2e-07 Score=108.57 Aligned_cols=158 Identities=14% Similarity=0.073 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH--h--hch
Q psy3157 222 LFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG--L--YKS 297 (822)
Q Consensus 222 ~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~--~--a~s 297 (822)
....+....++|.|+.+.+|.+..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... . ..+
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSS 335 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 444555677889999888899999999988888888889999999999999999988776554433332221 1 223
Q ss_pred HHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHH-HHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 298 VYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTF-LGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 298 ~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~-iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
....++...+.+++.+. .+....+++|++|++.| ++|+.+.... ++....|.+.+.+ +..+.|...+++.++..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHH
Confidence 33222222223333333 45567888999998655 4677554444 3344577877855 444246666666665555
Q ss_pred HHHHHHh
Q psy3157 374 VNFVYTY 380 (822)
Q Consensus 374 i~~ll~~ 380 (822)
+.++..+
T Consensus 415 i~~~~~~ 421 (432)
T PRK10406 415 VAFLVSL 421 (432)
T ss_pred HHHHHHH
Confidence 5555433
No 168
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.90 E-value=1.2e-07 Score=106.76 Aligned_cols=160 Identities=14% Similarity=0.042 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSL-LQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL- 294 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~- 294 (822)
..++..........+.+.|+.+ .|++..++|++.....+ ...++.+++|++.||+|+|+++.++.++.++..+....
T Consensus 216 ~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 294 (390)
T TIGR02718 216 LALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQ 294 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455556677778876 79999999999888764 66677899999999999999988777665333322221
Q ss_pred -----hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-c--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 295 -----YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-S--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 295 -----a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
..+...++...++.+++.|. .+...+.+.+..++ + ++.+++.+...++|..+||.++|.+.+.. ||+..|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f 373 (390)
T TIGR02718 295 AAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGF 373 (390)
T ss_pred HHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHH
Confidence 12333344444555666665 56667777677654 4 45689999999999999999999999987 899999
Q ss_pred HHHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFVY 378 (822)
Q Consensus 366 ~i~~~~~li~~ll 378 (822)
++.+++.++..++
T Consensus 374 ~~~~~~~l~a~~~ 386 (390)
T TIGR02718 374 LSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHH
Confidence 8887776665443
No 169
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.90 E-value=2.4e-10 Score=133.11 Aligned_cols=172 Identities=15% Similarity=0.227 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL 294 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~ 294 (822)
++..++.....++....+. -+++.|+++.++.|++.+.+-++..+..++..++..|..|-+.+-+|.++.+++.+++++
T Consensus 9 ~~~~~~q~~~~g~~~~~lt-tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 9 CLLGLFQMMVSGYVNSSLT-TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc
Confidence 3344444344444444444 466779999999999999999999999999999999977777777899999999888755
Q ss_pred hc--------------------------------------------------hHHHHHHHHHHhhcccch-hhHHHHHHH
Q psy3157 295 YK--------------------------------------------------SVYVIFFVRILLGLFKHT-QVLCKAYIS 323 (822)
Q Consensus 295 a~--------------------------------------------------s~~~l~i~r~l~Gig~g~-~~~~~~~i~ 323 (822)
.+ -++.++++.++.|+|... ++...+|+=
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 10 034566788999999986 999999999
Q ss_pred Hhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------cchHHHHHHHHHHHHHHHHHHh
Q psy3157 324 DICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYE---------------------NGFFYICCMTSALFVVNFVYTY 380 (822)
Q Consensus 324 e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~---------------------~gw~~~f~i~~~~~li~~ll~~ 380 (822)
|.++++.- .+|++.....+|.++|-++++.++..+ +.|..-|.+.+++.++..+. +
T Consensus 168 Dnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip-l 246 (539)
T PF03137_consen 168 DNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP-L 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 99987644 489999999999999999998876532 12444455666665555554 3
Q ss_pred hhcccCCC
Q psy3157 381 WVVTDVKK 388 (822)
Q Consensus 381 ~~~~e~~~ 388 (822)
+.+|+.-+
T Consensus 247 ~~FPk~lp 254 (539)
T PF03137_consen 247 FFFPKKLP 254 (539)
T ss_dssp --------
T ss_pred HcCCccCC
Confidence 44555443
No 170
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.89 E-value=1.1e-07 Score=103.66 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQ--VLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~--~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+..++.......+..+++.|+.+. +|++..+.++..+.+..++++|.++.+++.||+|+|+++.++.++..++.++.
T Consensus 146 ~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~ 225 (310)
T TIGR01272 146 ALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGA 225 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3444444445666777888899753 69999999999999999999999999999999999999888888877777666
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSA 370 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~ 370 (822)
...++...+ .+-++.|++.+. +|...+...+.+|+ .+++.++. ....+|.+++|++.|.+.+.. |.++.|++..+
T Consensus 226 ~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~~~a~~v~~~ 302 (310)
T TIGR01272 226 ALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GIQLAFALPVP 302 (310)
T ss_pred HHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cchHHHHHHHH
Confidence 555544333 345578888886 88888888888876 35666765 566789999999999999986 78888875444
Q ss_pred H
Q psy3157 371 L 371 (822)
Q Consensus 371 ~ 371 (822)
+
T Consensus 303 ~ 303 (310)
T TIGR01272 303 C 303 (310)
T ss_pred H
Confidence 3
No 171
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.88 E-value=7.6e-08 Score=111.38 Aligned_cols=157 Identities=10% Similarity=0.050 Sum_probs=111.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc--hH-H-HHHHHH
Q psy3157 230 PLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK--SV-Y-VIFFVR 305 (822)
Q Consensus 230 ~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~--s~-~-~l~i~r 305 (822)
.+.|.+.. ..|.+....++......++.+++.+++|+++||+|||++++.+.++.+++.++.+... +. . ...++.
T Consensus 292 ~~~p~i~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 370 (479)
T PRK10077 292 YYAPEIFK-TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSM 370 (479)
T ss_pred HHHHHHHH-HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 34454444 5788877677777778888899999999999999999999999998888877765431 21 1 222233
Q ss_pred HHhhcccch--hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHH------hcccchHHHHHHHHHHHHHH
Q psy3157 306 ILLGLFKHT--QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVI------HYENGFFYICCMTSALFVVN 375 (822)
Q Consensus 306 ~l~Gig~g~--~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~------~~~~gw~~~f~i~~~~~li~ 375 (822)
++.+++.+. .+...++++|.+|++.| ++|+......+|.++++.+.+.+. +.. +|++.|++.+++.++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 449 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMGVLA 449 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHHHHHHH
Confidence 344444432 46678999999997555 578888888888888766655443 444 7888898888887777
Q ss_pred HHHHhhhcccCCC
Q psy3157 376 FVYTYWVVTDVKK 388 (822)
Q Consensus 376 ~ll~~~~~~e~~~ 388 (822)
+++.+++.||++.
T Consensus 450 ~~~~~~~~~e~~~ 462 (479)
T PRK10077 450 ALFMWKFVPETKG 462 (479)
T ss_pred HHHHHhccccCCC
Confidence 7776666776553
No 172
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.87 E-value=6.1e-08 Score=124.57 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 218 CFLDLFAASLIVPLVNNYLRTQVLLSNF-TIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~-~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
.++...........++.|+.+.+|++.. ..|++.++..++.+++.+++|+++||+++++++.++.++.+++.++..+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 241 LSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh
Confidence 3333344455566778888888999998 999999999999999999999999999999998888888888888888888
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFV 373 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~l 373 (822)
+++.++++.++.|++.+. .++..+++.+.+|++ ++++|+.++...+|.++++.+++.+.....++...|++.+.+.+
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 321 SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 888888888999999886 677788999998874 55688889899999988888887775532255666666555544
Q ss_pred HHH
Q psy3157 374 VNF 376 (822)
Q Consensus 374 i~~ 376 (822)
+..
T Consensus 401 ~~~ 403 (1146)
T PRK08633 401 IGT 403 (1146)
T ss_pred HHH
Confidence 433
No 173
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.85 E-value=2.6e-07 Score=107.66 Aligned_cols=141 Identities=17% Similarity=0.130 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL- 294 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~- 294 (822)
+..++..........++|.|++..+|.+..+.|+......++..++.++.|++.||+|+|+++..+.++.+++.++..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~ 345 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT 345 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444555667788999889999999999999999999999999999999999999998888888777665543
Q ss_pred --hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3157 295 --YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIH 356 (822)
Q Consensus 295 --a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~ 356 (822)
.++.+..++..++.|+|.|. .++....+.+..|++ +++.++++....+|..+|+.++|.+.+
T Consensus 346 ~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 346 DFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred cCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24566667778899999986 677777777878764 556888999999999999999888764
No 174
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.85 E-value=1.5e-07 Score=107.26 Aligned_cols=138 Identities=12% Similarity=0.039 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRIL 307 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l 307 (822)
+..++|.|+.+ .|.+..+.+.+.+...++..++.+++|+++||+|||+.+..+.++.++..++....++.....+..++
T Consensus 250 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 250 IFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 45567777776 69999999999999999999999999999999999999988887766665544433221112222233
Q ss_pred hhc--cc-chhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q psy3157 308 LGL--FK-HTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCM 367 (822)
Q Consensus 308 ~Gi--g~-g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i 367 (822)
.|+ +. +..+..+.++.|.+|++ ++++|+......+|..+||+++|++.+.. |+....++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~-g~~~~~~~ 392 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM-GLGAALTF 392 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc-cHHHHHHH
Confidence 333 22 22455667889999974 55688888888999999999999999887 66554333
No 175
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.85 E-value=6.6e-08 Score=110.41 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY- 295 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a- 295 (822)
..++............+.|.+..++ +....+++.++..++.+++.+++|+++||+|+|+++.++.++.+++.++..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 230 AYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred HHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc
Confidence 3344444444333333434443344 56677788888899999999999999999999999999988888877776664
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhcc-------cc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICV-------DS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-------~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
++.+.+++..++.|++.+. .+...++++|..+ +| ++.+|+++....+|..+|+.+.|.+.+..
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 309 SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566777778888888885 7777888888764 22 34588899999999999999999998764
No 176
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.84 E-value=3.1e-07 Score=103.74 Aligned_cols=149 Identities=15% Similarity=0.116 Sum_probs=110.8
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHh
Q psy3157 229 VPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILL 308 (822)
Q Consensus 229 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~ 308 (822)
..+++.++.+++|++..+.+++...+.++..++.++.|++.||.+++..+....+...+..++....++.+.+.+..++.
T Consensus 236 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 315 (394)
T PRK10213 236 FTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIW 315 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34443334446899999999999999999999999999999996544434433333444444445566777778888889
Q ss_pred hcccch-hhHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q psy3157 309 GLFKHT-QVLCKAYISDICVDS-TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 309 Gig~g~-~~~~~~~i~e~~p~~-~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll 378 (822)
|++.+. .+...+++.+..|++ ++..++.....++|..+||.++|.+.+.. |++..++..+++.++..+.
T Consensus 316 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 316 GLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI-GLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHHHHHHHHH
Confidence 988876 666777888877753 56677777888999999999999999986 8888888877665554433
No 177
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.84 E-value=4.8e-08 Score=111.05 Aligned_cols=160 Identities=14% Similarity=0.051 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH-HHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRT-QVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTI-LLTCLFTCIVSYL 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~-l~~~~ll~~i~~l 290 (822)
......++.......+..++|.++++ ..+.+..+.++..+...++..++.+++|+++||++||+. +....++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 325 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL 325 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH
Confidence 34445555555666777889999976 246788889999999999999999999999999997774 3344444444333
Q ss_pred HHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q psy3157 291 LLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCM 367 (822)
Q Consensus 291 l~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i 367 (822)
+.....+....+++..+.++|... .+.......|.+|++.| ++|+.+....+|.+++|.+.|.+.+..++|++.+++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~ 405 (412)
T TIGR02332 326 LASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWF 405 (412)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHH
Confidence 322232322222222223333322 33334445667777555 589999999999999999999999987569999887
Q ss_pred HHHHH
Q psy3157 368 TSALF 372 (822)
Q Consensus 368 ~~~~~ 372 (822)
.+++.
T Consensus 406 ~~~~~ 410 (412)
T TIGR02332 406 VAALL 410 (412)
T ss_pred HHHHH
Confidence 76644
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.84 E-value=7.4e-08 Score=123.75 Aligned_cols=165 Identities=8% Similarity=-0.083 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
+.+..++..+..+.+..++|.|+.+.+|.+....|++.+.+.++.+++.++.|+++++.++++.+.++.++.+++.+..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (1140)
T PRK06814 230 AILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLA 309 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHH
Confidence 33444444455556667888899988999999999999999999999999999999988877766666555555554443
Q ss_pred hh--------------------chHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHH
Q psy3157 294 LY--------------------KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAI 350 (822)
Q Consensus 294 ~a--------------------~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l 350 (822)
+. .+.+.++++.++.|++.+. .++..+++.+.+|+ ++|++|+.++...+|..+|+++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 310 FASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred hcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 32 6677778888889998886 77789999999987 5677999999999999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHH
Q psy3157 351 GGHVIHYENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 351 ~g~l~~~~~gw~~~f~i~~~~~li~~ll 378 (822)
++.+.....++...+++.+++.++..++
T Consensus 390 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 390 LALLQALGFSIPWIILFIALANLIVAIL 417 (1140)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9998754336777766666554444433
No 179
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.82 E-value=4.3e-07 Score=102.80 Aligned_cols=145 Identities=16% Similarity=0.105 Sum_probs=102.8
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhh-chHHHHHHHHH
Q psy3157 232 VNNYLRTQVLLSNFTIGAIASTF-SLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL---GLY-KSVYVIFFVRI 306 (822)
Q Consensus 232 l~~~l~~~~g~s~~~~g~~~s~~-~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~---~~a-~s~~~l~i~r~ 306 (822)
.+.++.+++|++..+.+++.+.. .++.+++.+++|++.||+|+|+.+.++.++.++..+.. ++. ++.+.+++.-+
T Consensus 232 ~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 232 STTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 33456667899999999988665 45688999999999999999998877666655544333 333 45565555544
Q ss_pred H----hhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 307 L----LGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 307 l----~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
+ .|++.+. .+....++.+.+|.+. .++++...++|..++++++|.+.+.. ||++.|.+.+++.++.+++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ--YALLSALASVGRVYVGPTSGYLVEAY-GWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHH
Confidence 4 3444443 4555666666666544 45666666788887778999999998 99999999888887765553
No 180
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.81 E-value=4.3e-08 Score=108.81 Aligned_cols=152 Identities=18% Similarity=0.112 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHH-HHHHH-HHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG-RKTI-LLTCL-FTCIVSY 289 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G-rr~~-l~~~~-ll~~i~~ 289 (822)
.+.+..++..........++|.|+.+.+|.+..+.+++.+...++..++.++.|+++||.+ +|+. +.... ....++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSL 299 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 3444555555555666778888888889999999999999999999999999999999864 3332 22221 1122222
Q ss_pred HHHHh--hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q psy3157 290 LLLGL--YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYI 364 (822)
Q Consensus 290 ll~~~--a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~ 364 (822)
..... ..+...+++..++.|++.+. .+....++.|.+|++ +++.|+++....+|..++|.+.|.+.+.. ||++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~ 378 (379)
T TIGR00881 300 LVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAGA 378 (379)
T ss_pred HHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-ccccc
Confidence 22222 23455555666777765543 556677889999875 45689999999999999999999999987 88875
Q ss_pred H
Q psy3157 365 C 365 (822)
Q Consensus 365 f 365 (822)
|
T Consensus 379 f 379 (379)
T TIGR00881 379 F 379 (379)
T ss_pred C
Confidence 4
No 181
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.81 E-value=3e-07 Score=104.66 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
++++.+++...++..+..++|.|.++.++ .........+..+...++.|++|+++||+|+|+++.++.++..++....
T Consensus 256 llslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~ 333 (462)
T PRK15034 256 LLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALL 333 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 45555555554455455567777776553 2223333444567788899999999999999999998887766665432
Q ss_pred Hh-h-----chHHHHHHHHHH----hhcccchhhHHHHHHHHhccc----------------------c-chHHHHHHHH
Q psy3157 293 GL-Y-----KSVYVIFFVRIL----LGLFKHTQVLCKAYISDICVD----------------------S-TKAFSQLMMV 339 (822)
Q Consensus 293 ~~-a-----~s~~~l~i~r~l----~Gig~g~~~~~~~~i~e~~p~----------------------~-~ra~g~~~~~ 339 (822)
.. . .+++.+.+..+. .|+|.| ....++.+++|+ + +-..|+....
T Consensus 334 ~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng---svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~ 410 (462)
T PRK15034 334 FLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG---STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAI 410 (462)
T ss_pred HHHhccccccHHHHHHHHHHHHHHHhcccch---HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHH
Confidence 22 1 245554444333 344444 334444454542 0 1137788888
Q ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcc
Q psy3157 340 TFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVT 384 (822)
Q Consensus 340 ~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~ 384 (822)
..+|+.+-|.+-|...+..+++...|++..+..+++.++.++..-
T Consensus 411 G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 411 GAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 888888889888888877768999999999998888887666543
No 182
>KOG2504|consensus
Probab=98.79 E-value=4.6e-08 Score=113.20 Aligned_cols=166 Identities=17% Similarity=0.270 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG--RKTILLTCLFTCIVSYL 290 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G--rr~~l~~~~ll~~i~~l 290 (822)
..++...+...+.....-.++.|.. ..+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.+
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~ 380 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARL 380 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHH
Confidence 4555666666677777777888777 58999999999999999999999999999999988 56677789999999999
Q ss_pred HHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q psy3157 291 LLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCM 367 (822)
Q Consensus 291 l~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i 367 (822)
.++++++++.+++..++.|++.|. ......++.|+++.+ .+++|+..++.+++.++||+++|.+.+..++|...|+.
T Consensus 381 ~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~ 460 (509)
T KOG2504|consen 381 FLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYF 460 (509)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhh
Confidence 999999999999999999999997 555556888998753 67899999999999999999999999988669999999
Q ss_pred HHHHHHHHHHHH
Q psy3157 368 TSALFVVNFVYT 379 (822)
Q Consensus 368 ~~~~~li~~ll~ 379 (822)
+++..+++.++.
T Consensus 461 ~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 461 CGLCFLLSAVLL 472 (509)
T ss_pred cChHHHHHHHHH
Confidence 999988887663
No 183
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.79 E-value=1.9e-07 Score=107.85 Aligned_cols=168 Identities=12% Similarity=0.173 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH--------HHHHH--
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTI--------LLTCL-- 282 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~--------l~~~~-- 282 (822)
.+.+..+...........++|.|+.+.+|.+..+.|++.++..++..++.+++|+++||+++|+. +..+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 344 (465)
T TIGR00894 265 AIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGG 344 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 45556666666677777889999998899999999999999999999999999999999864421 11111
Q ss_pred HHHHHHHHHHHh-hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Q psy3157 283 FTCIVSYLLLGL-YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYE- 358 (822)
Q Consensus 283 ll~~i~~ll~~~-a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~- 358 (822)
++.++..+.... ..+.+..+++.++.+.+.+. .+.......|..|+ .+.+.|+.+....+|+.++|.+.|.+.+..
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~ 424 (465)
T TIGR00894 345 LGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDS 424 (465)
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC
Confidence 111111111222 23444444444555554443 44444555566665 344588889999999999999999887643
Q ss_pred -cchHHHHHHHHHHHHHHHHHHh
Q psy3157 359 -NGFFYICCMTSALFVVNFVYTY 380 (822)
Q Consensus 359 -~gw~~~f~i~~~~~li~~ll~~ 380 (822)
++|..+|++.+++.++..++..
T Consensus 425 ~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 425 KNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred chHHHHHHHHHHHHHHHHHHHee
Confidence 3589999998888877766543
No 184
>PRK10054 putative transporter; Provisional
Probab=98.79 E-value=1.9e-07 Score=105.63 Aligned_cols=140 Identities=9% Similarity=0.084 Sum_probs=110.6
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHhhcccch-hhH
Q psy3157 240 VLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY-KSVYVIFFVRILLGLFKHT-QVL 317 (822)
Q Consensus 240 ~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a-~s~~~l~i~r~l~Gig~g~-~~~ 317 (822)
.+.+....+++.+...+.....+++.|++.||+++|+.+.+++++.+++.+...++ ++++.+++..++.|+|.+. .+.
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 239 SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 45666777888888888878888999999999999999999988888887777664 5777777788899998876 677
Q ss_pred HHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Q psy3157 318 CKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYW 381 (822)
Q Consensus 318 ~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~ 381 (822)
..+++.+..|++ +++++..+ ...+|..+||.++|.+.+.. |....|++.+....+..++...
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~ 382 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWSLFVILALAIVAAWLLMLK 382 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-ChhhHHHHHHHHHHHHHHHHHh
Confidence 788899998874 44566544 55689999999999999998 8888888876666655555443
No 185
>KOG3626|consensus
Probab=98.78 E-value=5.3e-08 Score=113.94 Aligned_cols=175 Identities=18% Similarity=0.233 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
++++..+...+..+++...+.. +++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++++.+++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~Itt-iErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITT-IERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 4556666666666665555554 677899999999999999999999999999999999888888889999999999988
Q ss_pred Hhhc-------------------h--------------------------------HH-HHHHHHHHhhcccch-hhHHH
Q psy3157 293 GLYK-------------------S--------------------------------VY-VIFFVRILLGLFKHT-QVLCK 319 (822)
Q Consensus 293 ~~a~-------------------s--------------------------------~~-~l~i~r~l~Gig~g~-~~~~~ 319 (822)
++.+ . ++ .++++.++.|+|... ++...
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 6620 0 22 455678999999986 89999
Q ss_pred HHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------cchHHHHHHHHHHHHHHHHHH
Q psy3157 320 AYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE------------------NGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 320 ~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~------------------~gw~~~f~i~~~~~li~~ll~ 379 (822)
+|+=|...++ ...+|++.....+|.++|-++|+++...+ +-|..-|++.+++.++..+.
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p- 338 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP- 338 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH-
Confidence 9999988764 34589999999999999999999987632 12555577777777766665
Q ss_pred hhhcccCCCC
Q psy3157 380 YWVVTDVKKY 389 (822)
Q Consensus 380 ~~~~~e~~~~ 389 (822)
++++|+..++
T Consensus 339 ~f~fPk~lp~ 348 (735)
T KOG3626|consen 339 LFFFPKELPK 348 (735)
T ss_pred HHhCcccCcc
Confidence 4556665543
No 186
>TIGR00895 2A0115 benzoate transport.
Probab=98.78 E-value=1.8e-07 Score=104.62 Aligned_cols=134 Identities=17% Similarity=0.223 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHH
Q psy3157 220 LDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVY 299 (822)
Q Consensus 220 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~ 299 (822)
+..........++| ++.+++|.+..+.+++.+...++..++.+++|+++||+|||+.+....+...+..++.....+.+
T Consensus 261 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (398)
T TIGR00895 261 MLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPT 339 (398)
T ss_pred HHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 33344444555666 45556899999999999999999999999999999999999554444433333333333356777
Q ss_pred HHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 300 VIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHV 354 (822)
Q Consensus 300 ~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l 354 (822)
.+++..++.|++.+. .+...+++.|.+|++. +++|+......+|..+||+++|++
T Consensus 340 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 340 LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 777888899998885 7888999999999754 568889999999999999999876
No 187
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.76 E-value=1.6e-06 Score=93.68 Aligned_cols=169 Identities=17% Similarity=0.091 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
.+.+...+-....|++-...+ ++|++..+++.+....+...++.+++.|.++||+|||+..++.+++.+++++ +-..+
T Consensus 42 vY~La~~aDWLQGpY~Y~LY~-~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~ 119 (354)
T PF05631_consen 42 VYLLAMAADWLQGPYLYALYE-SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSS 119 (354)
T ss_pred HHHHHHHHHHhhcchhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhcc
Confidence 344444555566666654444 5999999999999999999999999999999999999999988888888875 44568
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHH-HHHhcccc---ch-H--HHHHH-HHHHHHHHHHHHHHHHHHhccc-chHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAY-ISDICVDS---TK-A--FSQLM-MVTFLGFFIGPAIGGHVIHYEN-GFFYICC 366 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~-i~e~~p~~---~r-a--~g~~~-~~~~iG~~igp~l~g~l~~~~~-gw~~~f~ 366 (822)
+++.++++|++.|++... +++.-++ +.|.-... .. . ++... ...++-.+++.+++.++.+..+ |-.++|.
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~ 199 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFD 199 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHH
Confidence 899999999999999986 6666554 44543221 11 1 22222 1222333444455555555441 3467787
Q ss_pred HHHHHHHHHHHHHhhhcccCC
Q psy3157 367 MTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 367 i~~~~~li~~ll~~~~~~e~~ 387 (822)
...++.+++.+++...-+|+.
T Consensus 200 ~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 200 AAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHHHHHHHHhcccccC
Confidence 777777766666544444443
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.76 E-value=3e-07 Score=102.07 Aligned_cols=143 Identities=15% Similarity=0.044 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhc
Q psy3157 218 CFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-GRKTILLTCLFTCIVSYLLLGLYK 296 (822)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-Grr~~l~~~~ll~~i~~ll~~~a~ 296 (822)
.++..........++|.|+++ .|.+..+.+++.+...++.+++++++|+++||+ +||+++.++.++.+++.++..+..
T Consensus 206 ~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 206 FGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 333444445556778888875 799999999999999999999999999999999 566677777777777776666654
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-c--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-S--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFF 362 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~ 362 (822)
+...+. ..++.|++.|. .+...+.+.+..++ + ++..++.+....+|..+||.++|++.+..++|.
T Consensus 285 ~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 285 MHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred hhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 433222 45678888876 67666776665543 3 334777777788889999999999998874454
No 189
>PRK10133 L-fucose transporter; Provisional
Probab=98.74 E-value=4.6e-07 Score=103.87 Aligned_cols=152 Identities=13% Similarity=0.022 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHH
Q psy3157 223 FAASLIVPLVNNYL-RTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVI 301 (822)
Q Consensus 223 ~~~~~~~~~l~~~l-~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l 301 (822)
........+++.|+ ++.+|.++.+.++....+.++..++.+++|++.||+|+|+++..+.++.+++.++..+.++.+ .
T Consensus 272 ~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~ 350 (438)
T PRK10133 272 GAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-G 350 (438)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-H
Confidence 33333445666675 456899999999999999999999999999999999999999888877777666666655543 2
Q ss_pred HHHHHHhhcccch-hhHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHH
Q psy3157 302 FFVRILLGLFKHT-QVLCKAYISDICVDS-TKAFSQLMMVTFLGFFIGPAIGGHVIHYENG-FFYICCMTSALFVVNFV 377 (822)
Q Consensus 302 ~i~r~l~Gig~g~-~~~~~~~i~e~~p~~-~ra~g~~~~~~~iG~~igp~l~g~l~~~~~g-w~~~f~i~~~~~li~~l 377 (822)
++..++.|++.+. +|...+...+.++++ +.+.++..+ ..+|..++|++.|.+.+.. | -+..|++..+..++..+
T Consensus 351 ~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~-g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 351 LIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAA-GNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHH
Confidence 4556778999986 899999999988764 455666653 4478888999999998876 6 78888765555544443
No 190
>KOG0637|consensus
Probab=98.73 E-value=5.9e-08 Score=106.47 Aligned_cols=140 Identities=24% Similarity=0.329 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChHHHH-HHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL----YGRKTILL-TCLFTCIV 287 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr----~Grr~~l~-~~~ll~~i 287 (822)
.++...+...+++..-..++++|+++ .|++....+.+..+.-+...+.+|+.|..+|| ||||+.++ .+.+..++
T Consensus 36 ~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~ 114 (498)
T KOG0637|consen 36 SVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAV 114 (498)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHH
Confidence 34556666677788888888888886 89999888888888888889999999999995 89877666 55666677
Q ss_pred HHHHHHhhchHHHH------------HHHHHHhhc-----ccch-hhHHHHHHHHhccc--c-chHHHHHHHHHHHHHHH
Q psy3157 288 SYLLLGLYKSVYVI------------FFVRILLGL-----FKHT-QVLCKAYISDICVD--S-TKAFSQLMMVTFLGFFI 346 (822)
Q Consensus 288 ~~ll~~~a~s~~~l------------~i~r~l~Gi-----g~g~-~~~~~~~i~e~~p~--~-~ra~g~~~~~~~iG~~i 346 (822)
+.++.+++.++..+ .+..++.|+ +.-. ..++-++++|.... + .|+++.+..+.++|.++
T Consensus 115 ~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL 194 (498)
T KOG0637|consen 115 SLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL 194 (498)
T ss_pred HHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee
Confidence 77777776544322 233344444 3333 77889999999843 3 34899999999999999
Q ss_pred HHHHHHH
Q psy3157 347 GPAIGGH 353 (822)
Q Consensus 347 gp~l~g~ 353 (822)
|..++++
T Consensus 195 GY~~g~y 201 (498)
T KOG0637|consen 195 GYALGSY 201 (498)
T ss_pred eeecccc
Confidence 9888874
No 191
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.73 E-value=7.9e-07 Score=100.42 Aligned_cols=148 Identities=12% Similarity=0.079 Sum_probs=112.6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHh
Q psy3157 229 VPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILL 308 (822)
Q Consensus 229 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~ 308 (822)
...++.|+++.+|.+..+.|++.+...++.++++++.+++.||+++|+++..+.+ .++..++.++.++++..++..++.
T Consensus 225 ~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 225 RFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3344557777899999999999999999999999999999999999988877753 344444556667777777778889
Q ss_pred hcccch-hhHHHHHHHHhcccc---chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 309 GLFKHT-QVLCKAYISDICVDS---TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 309 Gig~g~-~~~~~~~i~e~~p~~---~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
|++.+. .++..+.+.+..|++ +++.++.+....+|..++..+.+.+... |-+..+++.+...++.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKL--GVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHH
Confidence 998885 666777777776553 5578899999999999999999976444 66666665555544444443
No 192
>TIGR00898 2A0119 cation transport protein.
Probab=98.73 E-value=4.2e-07 Score=106.06 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=104.6
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHhhcccch-hh
Q psy3157 240 VLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSV--YVIFFVRILLGLFKHT-QV 316 (822)
Q Consensus 240 ~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~--~~l~i~r~l~Gig~g~-~~ 316 (822)
++.+.. +...+..+..+++.++.++++||+|||+++.++.++.+++.++..+.++. +..++..++.+++.+. ++
T Consensus 353 ~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (505)
T TIGR00898 353 LGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQ 429 (505)
T ss_pred cCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 454433 33344556677888999999999999999999999888888877776543 4444555566666654 77
Q ss_pred HHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 317 LCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 317 ~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
....+.+|.+|++. +++|+.+....+|.+++|.+.+ +.+. ++...+++.+++.++..++ .+++||++.
T Consensus 430 ~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~--~~~~~~~~~~~~~~~~~~~-~~~lpet~~ 499 (505)
T TIGR00898 430 MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK--WLFLPLVLFGGLALLAGIL-TLFLPETKG 499 (505)
T ss_pred HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH--HHhhHHHHHHHHHHHHHHH-HHcCcCCCC
Confidence 78899999999754 5688899999999999999998 4443 5667777777777666555 456677654
No 193
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.73 E-value=8.4e-07 Score=99.09 Aligned_cols=141 Identities=14% Similarity=0.086 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-----chH
Q psy3157 224 AASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY-----KSV 298 (822)
Q Consensus 224 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a-----~s~ 298 (822)
.........|.++.+.+|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.++..++.++..+. .+.
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSW 300 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 334445556777777899999999999999999999999999999999999999888877777766655543 234
Q ss_pred HHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHH-HHHHHHHHHHHHHhcccchHHHHH
Q psy3157 299 YVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFL-GFFIGPAIGGHVIHYENGFFYICC 366 (822)
Q Consensus 299 ~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~i-G~~igp~l~g~l~~~~~gw~~~f~ 366 (822)
..+++..++.|++.+. .+.......|..|+ ++++.++.+..... |.+.+|.++ .+.+.. +|...++
T Consensus 301 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~-~~~~~~~ 369 (385)
T TIGR00710 301 AMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS-LIHGNT-AWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH-hccccC-hHHHHHH
Confidence 4455566778888775 67777888887775 46678887766544 566666554 443332 4444443
No 194
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.73 E-value=4.2e-07 Score=105.22 Aligned_cols=143 Identities=14% Similarity=0.090 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL 294 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~ 294 (822)
....++..........++|.|+++.+|.+..+.|+......++..++.+++|++.||+|||+++.++.++.+++.++..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~ 340 (485)
T TIGR00711 261 CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAF 340 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 33444444455555667788888889999999999999999999999999999999999999999998888888777663
Q ss_pred ----hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 295 ----YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 295 ----a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
..+++.+++..++.|+|.+. .++......+.+|++ +++.|+.+....+|..+|+.+.+.+.+.
T Consensus 341 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 341 TFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23566677778889999886 666666777777864 4568999999999999999999998875
No 195
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.72 E-value=6e-07 Score=102.56 Aligned_cols=151 Identities=20% Similarity=0.254 Sum_probs=113.3
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----ChHHHHHHHHHHHHHHHHHHhh----chHHHHHH
Q psy3157 233 NNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG-----RKTILLTCLFTCIVSYLLLGLY----KSVYVIFF 303 (822)
Q Consensus 233 ~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G-----rr~~l~~~~ll~~i~~ll~~~a----~s~~~l~i 303 (822)
..++++++|+++.+...+.+...++.. .-+++|.++|-+. ||+-++++.++.+++.+..+.. .+.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 346778899999999999888888875 4689999999763 5666667777776655555542 34566666
Q ss_pred HHHHhhcccch-hhHHHHHHHHhccc--cch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Q psy3157 304 VRILLGLFKHT-QVLCKAYISDICVD--STK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~~~i~e~~p~--~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll 378 (822)
..++..+|... -.++-+++.|...+ +.+ ..+....+..+|.++|..++|.+.+.. ++++.|.+.+++.++..+.
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHH
Confidence 66777777765 67778888888743 223 366677788899999999999999887 8999999888887777666
Q ss_pred Hhhhccc
Q psy3157 379 TYWVVTD 385 (822)
Q Consensus 379 ~~~~~~e 385 (822)
..++.+|
T Consensus 171 ~~~~~~e 177 (433)
T PF03092_consen 171 ALFLLEE 177 (433)
T ss_pred HHHhhhh
Confidence 5666655
No 196
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=1.5e-06 Score=93.33 Aligned_cols=168 Identities=17% Similarity=0.153 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-GRKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-Grr~~l~~~~ll~~i~~ll 291 (822)
-+.+...+....++....++|.++.+ .|+|..+.|++.+...+.....++....+++|. .+|+..+...+++.++.+.
T Consensus 212 ~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G 290 (395)
T COG2807 212 QVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVG 290 (395)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 45556777788888999999998886 799999999999999999999999999999975 4777777777788888777
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH---HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA---FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCM 367 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra---~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i 367 (822)
+.+.+....+.- .++.|+|.|. ++.+...+.+-.+.-+.+ .|+.+....+=..+||.+.|++-|..++|+...+.
T Consensus 291 ~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~ 369 (395)
T COG2807 291 LLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVL 369 (395)
T ss_pred HHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence 777654322222 4899999885 999999999988654343 55555555555778999999999999899999988
Q ss_pred HHHHHHHHHHHHhhh
Q psy3157 368 TSALFVVNFVYTYWV 382 (822)
Q Consensus 368 ~~~~~li~~ll~~~~ 382 (822)
.+...+++.+..+..
T Consensus 370 l~~~~i~m~i~Gl~a 384 (395)
T COG2807 370 LALATLLMLIFGLRA 384 (395)
T ss_pred HHHHHHHHHHHHhhc
Confidence 888777776665443
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.68 E-value=4.3e-07 Score=104.40 Aligned_cols=143 Identities=15% Similarity=0.092 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
+..++...+........+.|+++.+|.+....++......++.+++.+++++++||+|+|+++.++.++.+++.++..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 235 IGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred HHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 33444444444444555556666678776655555555567788899999999999999999999998888877777664
Q ss_pred c--hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc---------chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 296 K--SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS---------TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 296 ~--s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~---------~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
+ +++.+++..++.|+|.+. .+...++.+|..|.. +..+|++++...+|..+|+.+.+.+++..
T Consensus 315 ~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 315 SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 566677778888999885 777788888887632 33478889999999999999999887653
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.68 E-value=1.3e-06 Score=98.36 Aligned_cols=141 Identities=13% Similarity=0.015 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRIL 307 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l 307 (822)
.....|.++.+++|.+..+.+++.+...++.+++.++.|++.||+|||+++.++.++..++.++..+.++.+..++..++
T Consensus 222 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (392)
T PRK10473 222 FVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITL 301 (392)
T ss_pred HHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777789999999999999999999999999999999999999999988888888877776655544444444
Q ss_pred hhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q psy3157 308 LGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALF 372 (822)
Q Consensus 308 ~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~ 372 (822)
.++|.+. .+. ....+..|.+.| .|......+++..+|+.+++++.+.. |+.....+.+.+.
T Consensus 302 ~~~g~~~~~~~--~~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~ 363 (392)
T PRK10473 302 ICAGFSVGFGV--AMSQALGPFSLR-AGVASSTLGIAQVCGSSLWIWLAAVL-GISAWNMLIGILI 363 (392)
T ss_pred HHHHHHHHhHH--HHHHHhccCccc-ccHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 4444432 222 222334443333 24445556677788888888887766 6665444444433
No 199
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.67 E-value=7.7e-07 Score=100.76 Aligned_cols=149 Identities=11% Similarity=0.051 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy3157 229 VPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD-LYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRIL 307 (822)
Q Consensus 229 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD-r~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l 307 (822)
...+|.|+++..+ +..+.+++.++..++..++..+.+++.| |++.++.+..+.++.+++.++.+++++++.+++..++
T Consensus 228 ~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 228 MLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred HHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4456777776444 6788888888887777666666666665 5666677778888888888777788888777777788
Q ss_pred hhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhccc--c-hHHHHHHHHHHHHHHHHH
Q psy3157 308 LGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYEN--G-FFYICCMTSALFVVNFVY 378 (822)
Q Consensus 308 ~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~--g-w~~~f~i~~~~~li~~ll 378 (822)
.|++.+. .+...+++.+..|++ ++++|+.+....+|..+||.++|++.+..+ + ....+++.+++.++..+.
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8888775 677789999999864 566899999999999999999999998742 2 344555555555544443
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.66 E-value=4e-07 Score=106.31 Aligned_cols=135 Identities=12% Similarity=0.029 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc----hHHHHHHHHHHhhc-ccchhhHHHHHHHHhcc
Q psy3157 253 TFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK----SVYVIFFVRILLGL-FKHTQVLCKAYISDICV 327 (822)
Q Consensus 253 ~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~----s~~~l~i~r~l~Gi-g~g~~~~~~~~i~e~~p 327 (822)
+..++.+++.+++++++||+|||++++++.++.+++.++.++.. +...+.+..+...+ +.+..+....+.+|.+|
T Consensus 343 ~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p 422 (502)
T TIGR00887 343 IALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFP 422 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCc
Confidence 34456667888999999999999999888877776665555432 11111211111122 22335566778899999
Q ss_pred ccch--HHHHHHHHHHHHHHHHHHHHHHHHhcc---------cchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 328 DSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYE---------NGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 328 ~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~---------~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
.+.| ++|+.+....+|.+++|.+.+.+.+.. .++...|++.+++.++..+. .+++||++.
T Consensus 423 ~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~ 493 (502)
T TIGR00887 423 TRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKG 493 (502)
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCC
Confidence 8655 588899999999999999999988742 13456777777777766554 466788664
No 201
>KOG0569|consensus
Probab=98.65 E-value=7.5e-07 Score=101.20 Aligned_cols=152 Identities=15% Similarity=0.167 Sum_probs=108.2
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc---hHH------HHHHHHHHh
Q psy3157 238 TQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK---SVY------VIFFVRILL 308 (822)
Q Consensus 238 ~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~---s~~------~l~i~r~l~ 308 (822)
..-|++..+.-++.....+...+..+.+.++.||+|||+.++++..++.+..+++.... +.. ..+++.++.
T Consensus 298 ~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 298 KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLF 377 (485)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34799999999999999999999999999999999999999999998888887766532 111 122333333
Q ss_pred --hcccchhhHHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcc
Q psy3157 309 --GLFKHTQVLCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVT 384 (822)
Q Consensus 309 --Gig~g~~~~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~ 384 (822)
+++.|.-|..+-+.+|.+|+..|. +++..+...++..+-...--.+.+.. |- +.|....+.+++..+..+..+|
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~-g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI-GP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 334455788899999999987774 44444444444443333333333444 32 6777778888888888899999
Q ss_pred cCCCCcc
Q psy3157 385 DVKKYPT 391 (822)
Q Consensus 385 e~~~~~~ 391 (822)
|++.+..
T Consensus 456 ETkgr~~ 462 (485)
T KOG0569|consen 456 ETKGRTP 462 (485)
T ss_pred ccCCCCH
Confidence 9986543
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.64 E-value=2.6e-06 Score=95.07 Aligned_cols=164 Identities=16% Similarity=0.156 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHH
Q psy3157 225 ASLIVPLVNNYLRTQVL---LSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVI 301 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~g---~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l 301 (822)
+..+-..++.|....++ .+....|.+.++..+.-++.-.+..++.+|+|.|+.++++..+.++=.+.++++++.+.+
T Consensus 236 Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i 315 (412)
T PF01306_consen 236 YDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVI 315 (412)
T ss_dssp HHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHH
Confidence 34444456667765443 234568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccch-hhHHHHHHHHhccccchH--HHH-HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q psy3157 302 FFVRILLGLFKHT-QVLCKAYISDICVDSTKA--FSQ-LMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFV 377 (822)
Q Consensus 302 ~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra--~g~-~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~l 377 (822)
.+.+.+.|+-.+. .....-++++.+|+|-.+ ..+ .+.+.++|.++.+.++|.+.+.. |.+.+|++.+.+.++..+
T Consensus 316 ~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~tylimg~iv~~~~l 394 (412)
T PF01306_consen 316 SLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQHTYLIMGLIVLPFTL 394 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHHHHHHHHHHHHHHHH
Confidence 9999999999986 788899999999988654 444 45778999999999999999998 999999999999888888
Q ss_pred HHhhhcccCCCC
Q psy3157 378 YTYWVVTDVKKY 389 (822)
Q Consensus 378 l~~~~~~e~~~~ 389 (822)
+..+.+++.++.
T Consensus 395 i~~f~l~~~~~~ 406 (412)
T PF01306_consen 395 ISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHS--SSST
T ss_pred HheeeecCCCcc
Confidence 877777765543
No 203
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.62 E-value=2.4e-06 Score=95.60 Aligned_cols=159 Identities=15% Similarity=0.133 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---hHHHH-HHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGR---KTILL-TCLFTCIVS 288 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Gr---r~~l~-~~~ll~~i~ 288 (822)
.+....++.......+..++|.|+++ .|.+.. .+...++..+...++ .++++||..| |+... ...++.++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~ 270 (368)
T TIGR00903 196 IIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAF 270 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHH
Confidence 45556666666677778899999975 678764 566555555554444 4677777654 34333 234444444
Q ss_pred HHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHH
Q psy3157 289 YLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 289 ~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f 365 (822)
.++.++..+....++..++.|++... ++...++.+|.+|++ ++++|+.+....+|.+++|++.+.+.. +....|
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f 347 (368)
T TIGR00903 271 FLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYF 347 (368)
T ss_pred HHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHH
Confidence 44445555554555555666776654 677889999999985 456899999999999999999988773 666778
Q ss_pred HHHHHHHHHHHHHH
Q psy3157 366 CMTSALFVVNFVYT 379 (822)
Q Consensus 366 ~i~~~~~li~~ll~ 379 (822)
.+.+++.++..+..
T Consensus 348 ~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 348 TFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777766664
No 204
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.59 E-value=1.2e-06 Score=100.14 Aligned_cols=145 Identities=21% Similarity=0.264 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.+....++...+........+.|.+..+|.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++.
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH
Confidence 3444555555666666666666777667766 567788888999999999999999999999999999999999999988
Q ss_pred Hhhc--hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-------c--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 293 GLYK--SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-------S--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 293 ~~a~--s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-------~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
.+.. +.+.+++..++.|++.+. .....++++|..+. | +..+|+.+....+|..+++.+.+.+++..
T Consensus 308 ~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 308 FFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred HHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 8875 999999999999999986 77888999998863 1 12378888888999999999999887653
No 205
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.57 E-value=6.8e-06 Score=92.78 Aligned_cols=170 Identities=21% Similarity=0.187 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVL-LSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g-~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
.+..++..........+.+.|+++ .| .+....+.+.++..++-++.-.+.+++..|+|.|+++.++.+.+++=..+.+
T Consensus 213 ll~~~l~~~~~~~~~~f~~~yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 213 LLAAFLIGISHAAYYTFFSIYLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 345555566667777778888887 55 7777888888888888889989999999999999999999999988887877
Q ss_pred hh-chHHHHHHH----HHHhhcccch-hhHHHHHHHHhccccch--HHHHHHH-HHHHHHHHHHHHHHHHHhccc-----
Q psy3157 294 LY-KSVYVIFFV----RILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMM-VTFLGFFIGPAIGGHVIHYEN----- 359 (822)
Q Consensus 294 ~a-~s~~~l~i~----r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~-~~~iG~~igp~l~g~l~~~~~----- 359 (822)
.. ++.+..++. ..+.|+..|. ......++.+.+|++.| +.+++.. ..++|.++|..++|++.+..+
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 76 555444333 3468988886 78889999999998654 5787665 568999999999999999761
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 360 GFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 360 gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
.|...+.+.+++.++..++.+++.++
T Consensus 372 ~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 372 DWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 24455666666666666555555544
No 206
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.49 E-value=1.1e-05 Score=90.06 Aligned_cols=134 Identities=10% Similarity=-0.053 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hh-h
Q psy3157 220 LDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL---GL-Y 295 (822)
Q Consensus 220 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~---~~-a 295 (822)
+...+.....+..|.++.+.+|.+..+.|++.+...++..++.++.|++.||+|||+++.++.++..+..+.. .. .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD 284 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344445555666777789999999999999999999999999999999999999888776544433222 22 2
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHH-HHHHHHHHHHHHHHH
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMM-VTFLGFFIGPAIGGH 353 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~-~~~iG~~igp~l~g~ 353 (822)
.+.+.+.++.++.+.+.+. ......++.|..|+ ++++.++.+. ...+|..+|+++++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 285 LGFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2444444444444444443 44555667777664 4566666544 345677777766543
No 207
>KOG4686|consensus
Probab=98.49 E-value=3.8e-06 Score=86.59 Aligned_cols=149 Identities=18% Similarity=0.230 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH-HHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFT-CIVSYLL 291 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll-~~i~~ll 291 (822)
++..++++......-+...-|.++++.+|+|+...+.+.+......++..++.|.++|++|++...+.+..+ ..++-..
T Consensus 268 ~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~ 347 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG 347 (459)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh
Confidence 555566666666666666777788999999999999999999898999999999999999999877755433 3333333
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFY 363 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~ 363 (822)
..+ +++.=++...+.|+.... ....+..++-+.|++ +.++|..+...++|..+-|+++|++.+..+++-+
T Consensus 348 l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 348 LFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred HHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 333 223334455667776654 334566677777775 5578999999999999999999999987644444
No 208
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.49 E-value=2.4e-05 Score=86.99 Aligned_cols=160 Identities=18% Similarity=0.283 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHh-cCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q psy3157 228 IVPLVNNYLRTQ-VLLSNFTIG-AIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVR 305 (822)
Q Consensus 228 ~~~~l~~~l~~~-~g~s~~~~g-~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r 305 (822)
.-|++..|+.+. .|++..++. -+.-+..-.+++..++...+.|..|.|++++++.+...+..++..+.++...+-+.-
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q 101 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQ 101 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHH
Confidence 457777788775 899988875 445556666777888999999999999999999999999999999999999999999
Q ss_pred HHhhcccchhhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHhhh
Q psy3157 306 ILLGLFKHTQVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE-NGFFYICCMTSALFVVNFVYTYWV 382 (822)
Q Consensus 306 ~l~Gig~g~~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~-~gw~~~f~i~~~~~li~~ll~~~~ 382 (822)
++.|++.++-.+..+++--..|++ +|+.+....+.-+|-.+|.++|..+.... .+++...++......+++++ .++
T Consensus 102 ~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~-~~f 180 (412)
T PF01770_consen 102 FFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI-ALF 180 (412)
T ss_pred HHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHH
Confidence 999999988777778887777763 67888888899999999999998887743 24555656555444444444 466
Q ss_pred cccCCC
Q psy3157 383 VTDVKK 388 (822)
Q Consensus 383 ~~e~~~ 388 (822)
+|..++
T Consensus 181 LP~~~~ 186 (412)
T PF01770_consen 181 LPMPKR 186 (412)
T ss_pred cCCCCc
Confidence 676543
No 209
>KOG3764|consensus
Probab=98.46 E-value=1.9e-07 Score=100.82 Aligned_cols=165 Identities=18% Similarity=0.177 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG--RKTILLTCLFTCIVSYLL 291 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G--rr~~l~~~~ll~~i~~ll 291 (822)
+.+.....+.+.++.-|.++.++.+.+..+..++|....-..+.+.++..+.|.++||++ |-.....+++..++....
T Consensus 275 ~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~ 354 (464)
T KOG3764|consen 275 IAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGP 354 (464)
T ss_pred hhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhch
Confidence 344445556777888899999888888877779999998999999999999999999999 644555777778888888
Q ss_pred HHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc---c-----chHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q psy3157 292 LGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD---S-----TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFF 362 (822)
Q Consensus 292 ~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~---~-----~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~ 362 (822)
..+++++..+++-++..|++.+. .......+...++. . +-.+++...++.+|..+||.++|.+.+.. |++
T Consensus 355 iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~ 433 (464)
T KOG3764|consen 355 IPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFE 433 (464)
T ss_pred hHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHH
Confidence 88999999999988888888763 33333344444433 2 22478899999999999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy3157 363 YICCMTSALFVVNFVYT 379 (822)
Q Consensus 363 ~~f~i~~~~~li~~ll~ 379 (822)
|...+.++..++...+.
T Consensus 434 wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 434 WLMTIIGILNLIYAPVL 450 (464)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998888887776553
No 210
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.45 E-value=3.9e-06 Score=93.09 Aligned_cols=124 Identities=15% Similarity=0.091 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFS-LLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL 294 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~-l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~ 294 (822)
+..++...........++.|+.+ +|++..+.+.+.++.. ++.+++.+++|+++||+|||+.+.++.++.++...+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 294 (356)
T TIGR00901 216 LLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVW 294 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566667788888877 8999999998887665 577899999999999999999988888877776665544
Q ss_pred h-----------chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHH
Q psy3157 295 Y-----------KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVT 340 (822)
Q Consensus 295 a-----------~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~ 340 (822)
. ++.+.++.+.++.+++.+. .+...+++.|.+|++.| .+|+++...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 295 LASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 2 3456677778888999885 88999999999998655 577766554
No 211
>PRK11043 putative transporter; Provisional
Probab=98.45 E-value=1.7e-05 Score=89.49 Aligned_cols=130 Identities=12% Similarity=0.021 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hh--hchHHHH
Q psy3157 227 LIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL---GL--YKSVYVI 301 (822)
Q Consensus 227 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~---~~--a~s~~~l 301 (822)
....+.|.++++ +|.+..+.|+......++..++..+.+++.||+|+|+.+....+..+++.+.. .. .++++.+
T Consensus 221 ~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (401)
T PRK11043 221 AWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPL 299 (401)
T ss_pred HHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHH
Confidence 334456666654 89999999998888888999999999999999999887655544444433322 12 3455555
Q ss_pred HHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 302 FFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 302 ~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
++...+.|++.+. ++...+...+..|+ ++++.|+++.....+..+++.+.|.+.+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 300 LIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 5666777777775 77777777777765 67889999988888888888888888764
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.44 E-value=9.3e-06 Score=92.29 Aligned_cols=157 Identities=11% Similarity=0.007 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQ-VLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~-~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
..++..........+++.|..+. .+.+....+...+.+..+..+|.+++|+++||+++|+++.++.++.++..++..+.
T Consensus 240 ~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~ 319 (410)
T TIGR00885 240 AQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA 319 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 34444444444567777777652 24455555556666778889999999999999999999999888888888888887
Q ss_pred chHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cchHHHHHHHH
Q psy3157 296 KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYE-----NGFFYICCMTS 369 (822)
Q Consensus 296 ~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~-----~gw~~~f~i~~ 369 (822)
++... .++.++.|++.+. +|...+...+..+++.+..+.......+|++++|++.|++.|.. ++.+..|++..
T Consensus 320 ~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 320 GGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHhccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 77554 4555677777765 89999999999988655322222333499999999999999943 24677777654
Q ss_pred HHHHH
Q psy3157 370 ALFVV 374 (822)
Q Consensus 370 ~~~li 374 (822)
++.+.
T Consensus 399 ~~~~~ 403 (410)
T TIGR00885 399 LCFAV 403 (410)
T ss_pred HHHHH
Confidence 44433
No 213
>KOG2532|consensus
Probab=98.42 E-value=1.8e-06 Score=98.83 Aligned_cols=172 Identities=16% Similarity=0.169 Sum_probs=122.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC--------hHHHH-HH
Q psy3157 211 PHKISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGR--------KTILL-TC 281 (822)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Gr--------r~~l~-~~ 281 (822)
.+.+.+..+....+...+..++|.|+++.+|++..+.|++.++..+.+.+..+++|.++||.-+ |+++. ++
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~ 339 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIA 339 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHH
Confidence 3467778888999999999999999999999999999999999999999999999999998754 23333 55
Q ss_pred HHHHHHHHHHHHhhch--H-HHHHHHHHHhhcccchhhHHHHHHHHhcccc-chHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 282 LFTCIVSYLLLGLYKS--V-YVIFFVRILLGLFKHTQVLCKAYISDICVDS-TKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 282 ~ll~~i~~ll~~~a~s--~-~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~-~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
....+++.+..++.++ . ..+++.-+..++.....+....-..|..|+. +-.+|+.+....+.+.++|.+.|.+...
T Consensus 340 ~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~ 419 (466)
T KOG2532|consen 340 FGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD 419 (466)
T ss_pred HHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC
Confidence 6666666666666542 2 2222221212221111222233333334543 4468999999999999999999999842
Q ss_pred --ccchHHHHHHHHHHHHHHHHHHhhh
Q psy3157 358 --ENGFFYICCMTSALFVVNFVYTYWV 382 (822)
Q Consensus 358 --~~gw~~~f~i~~~~~li~~ll~~~~ 382 (822)
...|+++|++.+++.++..++..++
T Consensus 420 ~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 420 NTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 2489999999999988887653333
No 214
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.42 E-value=1.5e-05 Score=84.24 Aligned_cols=151 Identities=25% Similarity=0.357 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhch--H
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSN--FTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKS--V 298 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~--~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s--~ 298 (822)
.......+..+.+..+ ++.+. ...++..+.+.++..++.+++|.++||+|||+.+..+.....++.++..+..+ .
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 4444455555554444 45454 57899999999999999999999999999998888887765666666666665 8
Q ss_pred HHHHHHHHHhhcccch-hhHHHHHHHHhccc---cchHHHHHHH-HHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHH
Q psy3157 299 YVIFFVRILLGLFKHT-QVLCKAYISDICVD---STKAFSQLMM-VTFLGFFIGPAIGGHVIHY-ENGFFYICCMTSALF 372 (822)
Q Consensus 299 ~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~---~~ra~g~~~~-~~~iG~~igp~l~g~l~~~-~~gw~~~f~i~~~~~ 372 (822)
+.+++.|++.|++.+. .+...+++.+++|+ +....+.... ...+|.+++|.+++.+... ..+|++.|.+.....
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 8899999999999986 88899999999986 3334666666 5778888998888777654 237888666655554
Q ss_pred HH
Q psy3157 373 VV 374 (822)
Q Consensus 373 li 374 (822)
..
T Consensus 175 ~~ 176 (338)
T COG0477 175 LL 176 (338)
T ss_pred HH
Confidence 43
No 215
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.39 E-value=5e-06 Score=91.36 Aligned_cols=130 Identities=27% Similarity=0.321 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--
Q psy3157 219 FLDLFAASLIVPLVNNYLRTQVLLS-NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY-- 295 (822)
Q Consensus 219 ~~~~~~~~~~~~~l~~~l~~~~g~s-~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a-- 295 (822)
+...........++|.|+.+.+|.+ ..+.+++.++..++..++.++.|+++||+|+|+...+......+..+...+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 216 FLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred hHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333455557777887777789999 8999999999999999999999999999999888777776666666665543
Q ss_pred -chHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHH
Q psy3157 296 -KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGP 348 (822)
Q Consensus 296 -~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp 348 (822)
.+....++..++.|++.+. .+...+++.+.+|++ +++.|+.+...++|..+||
T Consensus 296 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3557777788889998886 888899999999875 4568999999999999987
No 216
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.37 E-value=5e-05 Score=79.47 Aligned_cols=131 Identities=15% Similarity=0.052 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-------chH
Q psy3157 226 SLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY-------KSV 298 (822)
Q Consensus 226 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a-------~s~ 298 (822)
.+..+.....+++.+|+|.++...+.....+|..+ +++.|.+.|++|++.++.+|.+...++..+...+ .++
T Consensus 18 ~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~ 96 (250)
T PF06813_consen 18 TYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPV 96 (250)
T ss_pred ccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccch
Confidence 33444444567778999999999999999999876 5889999999999999999999999988887663 367
Q ss_pred HHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 299 YVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 299 ~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
|.+++..++.|.+.+. .........+.||. |+.+.|+.-...++++.+-..+...+...
T Consensus 97 ~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 97 WLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 7887777877777664 45555556677885 66678988888888776665555555444
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=98.36 E-value=1.5e-05 Score=91.45 Aligned_cols=115 Identities=19% Similarity=0.221 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHhhcccch-hhHHHH
Q psy3157 244 NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL--YKSVYVIFFVRILLGLFKHT-QVLCKA 320 (822)
Q Consensus 244 ~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~--a~s~~~l~i~r~l~Gig~g~-~~~~~~ 320 (822)
....+.+.....++.+++.+++++++||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+. .+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455666677888889999999999999999998887766554433222 35677778888899999886 788889
Q ss_pred HHHHhccc----cc-h----HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 321 YISDICVD----ST-K----AFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 321 ~i~e~~p~----~~-r----a~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
+++|..+. .+ | .+|....+..+|..+|+.++|.+++..
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998752 11 1 367788888999999999999998754
No 218
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.34 E-value=9.1e-06 Score=94.18 Aligned_cols=141 Identities=17% Similarity=0.089 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh--
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL-- 294 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~-- 294 (822)
..++............+.|.+. ..-+....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.+...+
T Consensus 239 ~~~~~~~~~~~~~~~~~y~~~y-~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~ 317 (473)
T PRK10429 239 MALAYNIASNIINGFAIYYFTY-VIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMG 317 (473)
T ss_pred HHHHHHHHHHHHhhheeeEEEE-ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444444444444433332 3335566777777777889999999999999999999998888776655554432
Q ss_pred ---hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-----cch----HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 295 ---YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-----STK----AFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 295 ---a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-----~~r----a~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
..+.+.+++..++.|++.+. .+...++++|..+. ..| .+|...+..-+|..+|+.+.|++++..
T Consensus 318 ~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 318 LAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566677777888888875 77778899988652 122 477788888899999999999988643
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.32 E-value=4.8e-05 Score=85.67 Aligned_cols=133 Identities=9% Similarity=-0.047 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHH-HHHHHHHHHHh--hchHHHH
Q psy3157 225 ASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLF-TCIVSYLLLGL--YKSVYVI 301 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~l-l~~i~~ll~~~--a~s~~~l 301 (822)
........+.++++.+|.+..+.+++.....++..++.++.+++.||++++........ +..+....... ..+.+.+
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTL 302 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 33444455667777789999999999999999999999999999999984333322222 22222222222 2355667
Q ss_pred HHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 302 FFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 302 ~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
++..++.|++.+. .+...++..+.+|+ ++.+.++.+....+|..+|+.+++.+...
T Consensus 303 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 303 LVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 7778888888886 78888888888875 45568888888899999999999988655
No 220
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.29 E-value=3.3e-05 Score=89.50 Aligned_cols=162 Identities=11% Similarity=0.113 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHHHHHHHHHHHHH----HHhh-hCChHHH--HHHHHHHHHHHH
Q psy3157 222 LFAASLIVPLVNNYLRTQVLLSNFT----IGAIASTFSLLQIISAPTVGY----LSDL-YGRKTIL--LTCLFTCIVSYL 290 (822)
Q Consensus 222 ~~~~~~~~~~l~~~l~~~~g~s~~~----~g~~~s~~~l~~~ig~~~~G~----LsDr-~Grr~~l--~~~~ll~~i~~l 290 (822)
...+....+.++.+..+..+.+... .+++.++..+..++.+++..+ +.+| .+.+... .+|+++.+++.+
T Consensus 285 ~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~ 364 (475)
T TIGR00924 285 WVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFL 364 (475)
T ss_pred HHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 3444444555666665544443222 568888888888888877554 4444 2333433 678888888877
Q ss_pred HHHh---------hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 291 LLGL---------YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 291 l~~~---------a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
..++ ..|++++++..++.|+|+.. .|...+++.+..|+ |++.+|++.....+|..+|+.++.......
T Consensus 365 ~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~ 444 (475)
T TIGR00924 365 TFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ 444 (475)
T ss_pred HHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7664 46899999999999999986 89999999999997 456699999999999999998888776654
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhhcc
Q psy3157 359 NGFFYICCMTSALFVVNFVYTYWVVT 384 (822)
Q Consensus 359 ~gw~~~f~i~~~~~li~~ll~~~~~~ 384 (822)
+|.+.|...+++.++..++.++..|
T Consensus 445 -~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 445 -GVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred -chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888888777776666544433
No 221
>KOG0253|consensus
Probab=98.29 E-value=3.6e-06 Score=89.92 Aligned_cols=126 Identities=15% Similarity=0.157 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccc-hhhHHHHHHHHhccccchH
Q psy3157 254 FSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKH-TQVLCKAYISDICVDSTKA 332 (822)
Q Consensus 254 ~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g-~~~~~~~~i~e~~p~~~ra 332 (822)
..+..+-|.++.+++.||+|||+.+..++++++++.++...+.+-....+..+..-++.. ++.+++.|..|++|...|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 345556788899999999999999999999999999988876543333222233333332 3556677888999987665
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh
Q psy3157 333 --FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWV 382 (822)
Q Consensus 333 --~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~ 382 (822)
.|....+.-+|+++.|+++ ...+. +-.....+.+.+++++.++..++
T Consensus 470 tgvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHHHHHHHHheee
Confidence 6778888899999999999 44333 23334455566666666654333
No 222
>KOG3762|consensus
Probab=98.28 E-value=6e-06 Score=92.54 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
..+..++.+.+.+.+..++--++++ .+-.....|........+-++.-++.+++..++|+-+++.+++.+..+=.+...
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S 454 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYS 454 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHH
Confidence 4455666666677777776555654 677777778778888888888999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH--HHHHH-HHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA--FSQLM-MVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra--~g~~~-~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+.+|+|+.+..-+++|+..+. +....+|++...||+.|+ .+++. ...++|-.+|.+|||.+..++ |-|..|.+.+
T Consensus 455 ~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~g 533 (618)
T KOG3762|consen 455 YLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFG 533 (618)
T ss_pred HhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHH
Confidence 999999999999999999996 999999999999997664 55544 456889999999999999998 8888888888
Q ss_pred HHHHHHHHH
Q psy3157 370 ALFVVNFVY 378 (822)
Q Consensus 370 ~~~li~~ll 378 (822)
+.+++.+++
T Consensus 534 iAcl~~l~~ 542 (618)
T KOG3762|consen 534 IACLVTLAL 542 (618)
T ss_pred HHHHHHHHH
Confidence 877766655
No 223
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.24 E-value=3.4e-05 Score=92.00 Aligned_cols=153 Identities=14% Similarity=0.111 Sum_probs=118.9
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhhch--------HH
Q psy3157 229 VPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL-YGRKTILLTCLFTCIVSYLLLGLYKS--------VY 299 (822)
Q Consensus 229 ~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~~~~ll~~i~~ll~~~a~s--------~~ 299 (822)
...+..|+.+.+|++......+...+....-+.++++|+++|+ +||++++.++.++..++.++.++... ..
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~ 86 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDL 86 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHH
Confidence 4445567777799999988888888888888899999999996 69999999999998888888776421 23
Q ss_pred HHHHHHHHhhcccch-hhHHHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHHHHHHhcc------cchHHHHHH
Q psy3157 300 VIFFVRILLGLFKHT-QVLCKAYISDICVDS-----TKAFSQLMMVTFLGFFIGPAIGGHVIHYE------NGFFYICCM 367 (822)
Q Consensus 300 ~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~-----~ra~g~~~~~~~iG~~igp~l~g~l~~~~------~gw~~~f~i 367 (822)
..+++.++.++|.|. -+...+...|.++++ .+.+.++..+.++|..+++++.+++.+.. .+|.+.|.+
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 355666777777775 678888999988642 22478888899999999999998887432 269999999
Q ss_pred HHHHHHHHHHHHhh
Q psy3157 368 TSALFVVNFVYTYW 381 (822)
Q Consensus 368 ~~~~~li~~ll~~~ 381 (822)
.+++.++++++...
T Consensus 167 ~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 167 PAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888877766433
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.18 E-value=7.1e-05 Score=81.81 Aligned_cols=161 Identities=17% Similarity=0.122 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.-.+..|+....-..+..+++.|+.+..|.+..+.+...+.+..+.++|..++.++..|+...+.+.+..++..+.++..
T Consensus 240 ~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~ 319 (422)
T COG0738 240 LGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV 319 (422)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 45566777777777788889999988789999999999999999999999999999999999999998888888888888
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
+++++...++. -++.|++.+. +|...+...+..|++....|..-....+|+++-|.+.|++.|.. |-...+.....+
T Consensus 320 ~l~~g~v~~~~-l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~maivGGAiiP~l~G~i~d~~-g~~~~~~~~pll 397 (422)
T COG0738 320 ALIGGVVALYA-LFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGAIIPPLQGVIADMF-GIQLTFLIVPLL 397 (422)
T ss_pred HHhcChHHHHH-HHHHHHHhHHHHHHHHHHHHhccCccccccceeeeeheecchHHHHHHHHHHHhh-hhHHHHHHHHHH
Confidence 88888665554 4667888886 99999999999996555555555667789999999999999987 766666644444
Q ss_pred HHHH
Q psy3157 372 FVVN 375 (822)
Q Consensus 372 ~li~ 375 (822)
+.+.
T Consensus 398 c~ly 401 (422)
T COG0738 398 CYLY 401 (422)
T ss_pred HHHH
Confidence 4433
No 225
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.14 E-value=1.9e-05 Score=87.57 Aligned_cols=126 Identities=21% Similarity=0.198 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh--h
Q psy3157 218 CFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL--Y 295 (822)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~--a 295 (822)
.++..........+++.|+++.+|.+..+.+++.++..++.+++.+++|+++||+|+|+.+..+.....++..+..+ .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (366)
T TIGR00886 234 YSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV 313 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC
Confidence 33333344455667778888889999999999999999999999999999999999988877776665555554443 2
Q ss_pred c--hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHH
Q psy3157 296 K--SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLG 343 (822)
Q Consensus 296 ~--s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG 343 (822)
. +.+.+++...+.+++.|. .....+++.+.+|+ +++++|+.+...++|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred CcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 2 555544444445455453 45556667777774 455678777665554
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.10 E-value=6.1e-05 Score=85.08 Aligned_cols=145 Identities=19% Similarity=0.184 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
.+...++...+..+.......|.+..+|.+.....+.......+.+++.+++.++++|+|+|+++.++.++.+++.++..
T Consensus 241 ~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 241 LLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 33445555555556566666566555677777777788888888888899999999999999999999999999999888
Q ss_pred hhc--hHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-----cch----HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 294 LYK--SVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-----STK----AFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 294 ~a~--s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-----~~r----a~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
+.+ +.+.+++..++.++|.+. .+..+++++|..+- ..| ..|.+.+..=+|.+++..+.|+++...
T Consensus 321 f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 321 FTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred hhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 865 788888889999999986 77888888888752 123 266677777788888888888877643
No 227
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.10 E-value=0.0002 Score=81.52 Aligned_cols=155 Identities=10% Similarity=-0.080 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH-----
Q psy3157 219 FLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG----- 293 (822)
Q Consensus 219 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~----- 293 (822)
++............|.++++.+|.+..+.++.......+..++..+.+++.++.++++.+.....+..++.++..
T Consensus 228 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~ 307 (413)
T PRK15403 228 SLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLL 307 (413)
T ss_pred HHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444555667788888899999999998888888888888888876554443433222222222222221
Q ss_pred hhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy3157 294 LYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICV-DSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSAL 371 (822)
Q Consensus 294 ~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~ 371 (822)
..++++.+++..++.|+|.+. .+......-.-.+ +++++.++++.....+..+++.+++++... +-++.|...+++
T Consensus 308 ~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~ 385 (413)
T PRK15403 308 WPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVV 385 (413)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHH
Confidence 123444456677888888875 5555432221111 367888888888888899999999988776 445555555544
Q ss_pred HHHH
Q psy3157 372 FVVN 375 (822)
Q Consensus 372 ~li~ 375 (822)
..+.
T Consensus 386 ~~~~ 389 (413)
T PRK15403 386 AGVI 389 (413)
T ss_pred HHHH
Confidence 4433
No 228
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.06 E-value=4.1e-05 Score=64.88 Aligned_cols=70 Identities=23% Similarity=0.478 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFT 284 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll 284 (822)
+...+++...+.+...|+++.|+++ .|++..++|.+.++..+...++++++|+++||+|+++.++....+
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 4456777777888999999999986 899999999999999999999999999999999999887765544
No 229
>PRK11462 putative transporter; Provisional
Probab=98.00 E-value=0.0004 Score=80.24 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHhhcccch-hhHHHH
Q psy3157 244 NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYK--SVYVIFFVRILLGLFKHT-QVLCKA 320 (822)
Q Consensus 244 ~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~--s~~~l~i~r~l~Gig~g~-~~~~~~ 320 (822)
....+++.+.+.++.+++.+++++++||+|+|+++..+.++.++..++..+.+ +.+.+++.-++.|++.+. .+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677788888899999999999999999987755554444333333322 233445555667777664 555567
Q ss_pred HHHHhccc-----cch--H--HHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 321 YISDICVD-----STK--A--FSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 321 ~i~e~~p~-----~~r--a--~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
+++|..+. ..| + ++.......+|..+|+.++|.+++.
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776651 122 2 4556677888999999999988765
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.99 E-value=0.00031 Score=80.71 Aligned_cols=177 Identities=11% Similarity=-0.048 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH------HH----HHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHH
Q psy3157 212 HKISFICFLDLFAASLIVPLVNNYLRT-QVLLSN------FT----IGAIASTFSLLQIISAPTVGYLSDLYGR-KTILL 279 (822)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~------~~----~g~~~s~~~l~~~ig~~~~G~LsDr~Gr-r~~l~ 279 (822)
+.++...++.-++...+.-+...|+.+ .|+-++ .+ ..|....+.+...+.+++.-++++++|+ |.+..
T Consensus 261 ~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~ 340 (477)
T TIGR01301 261 WILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWG 340 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 356677777777776666666666654 344221 11 2244555666666777888899999995 77778
Q ss_pred HHHHHHHHHHHHHHhhch---------------------HHHHHHHHHHhhcccch-hhHHHHHHHHhccccc----hHH
Q psy3157 280 TCLFTCIVSYLLLGLYKS---------------------VYVIFFVRILLGLFKHT-QVLCKAYISDICVDST----KAF 333 (822)
Q Consensus 280 ~~~ll~~i~~ll~~~a~s---------------------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~----ra~ 333 (822)
++.++.+++.+...+.++ .+..++...+.|+..+. ...-++++++..++++ -.+
T Consensus 341 ~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~m 420 (477)
T TIGR01301 341 IVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSM 420 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchh
Confidence 898888888777765443 36666777888888876 7888999999988532 248
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 334 SQLMMVTFLGFFIGPAIGGHVIHYEN-GFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 334 g~~~~~~~iG~~igp~l~g~l~~~~~-gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
|+++.+..+.+++..+..|.+.+..+ +-.+++.+.++..+++.++.++.+|++++
T Consensus 421 gilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 421 GVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999988888665542 46778888888899999988888987664
No 231
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.97 E-value=1.2e-05 Score=92.75 Aligned_cols=169 Identities=14% Similarity=0.092 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee--eccc-CccchhHHHHHHHHHHH
Q psy3157 587 YWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSR-NSYSSLYYSFILLTVSI 663 (822)
Q Consensus 587 ~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~-~~~~~l~~~~~l~~~~~ 663 (822)
++..+...+.-.++.+.+..+++.|+++.+|++..+++.+.+...+...++.++.| .|+. ++++.+..+.++..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 35556666667777778888899999998999999999888888888888888888 5555 77777777777777776
Q ss_pred HHHHhhhH-HHHHHHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchh
Q psy3157 664 LALYVSVN-LYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQ 742 (822)
Q Consensus 664 ~~l~~~~~-~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (822)
+++..... .....+.+.... ++.+..+|.- .. . +++
T Consensus 91 lll~~~~~~~~~~~l~l~li~-iG~G~~~~~~-------------~a-----------------l------------v~e 127 (493)
T PRK15462 91 VVLGASEIHPSFLYLSLAIIV-CGYGLFKSNV-------------SC-----------------L------------LGE 127 (493)
T ss_pred HHHHHhhcchhHHHHHHHHHH-HhcccccccH-------------HH-----------------H------------HHH
Confidence 55543221 111111111110 1111000000 00 0 011
Q ss_pred hhhhhcccCc-cccchhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 743 IFAIQKCQGD-VFGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 743 ~~~~~~~~g~-~~~~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
.+. ..+ ++. +++|+.+...++|+.++|.++|++.+..| |...|.++++..+++++.
T Consensus 128 lfp----~~~~~R~-sgf~i~Y~~~nlG~~iap~l~g~L~~~~G--w~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 128 LYE----PTDPRRD-GGFSLMYAAGNVGSIIAPIACGYAQEEYS--WAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HCC----CCCcccc-ceehHHHHHHHHHHHHHHHHHHHHHhhhC--hHHHHHHHHHHHHHHHHH
Confidence 110 011 233 48999999999999999999999988765 666788877666666554
No 232
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.97 E-value=0.00025 Score=82.74 Aligned_cols=135 Identities=11% Similarity=0.028 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhhhCChHHHHHHHHHHHHHHHHHHhhch---------HHHHHHHHHHhhcccc
Q psy3157 247 IGAIASTFSLLQIISAPTV----GYLSDLYGRKTILLTCLFTCIVSYLLLGLYKS---------VYVIFFVRILLGLFKH 313 (822)
Q Consensus 247 ~g~~~s~~~l~~~ig~~~~----G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s---------~~~l~i~r~l~Gig~g 313 (822)
.+++.++..+...+..++. +++.+|++....+.+|+++.+++.++.+++.+ .+++++..++.|+|++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4566666666666666665 56666666667888999999999888776644 5678889999999999
Q ss_pred h-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHh---------cccchHHHHHHHHHHHHHHHHHHhh
Q psy3157 314 T-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIH---------YENGFFYICCMTSALFVVNFVYTYW 381 (822)
Q Consensus 314 ~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~---------~~~gw~~~f~i~~~~~li~~ll~~~ 381 (822)
. .|...+++.+..|++ +|.+|.+.+...+|..++..+.+.... ...+..+.|...+++.++..++.++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6 899999999999985 455776665555555555444432210 0113667787777766655544333
No 233
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.92 E-value=7.7e-05 Score=86.29 Aligned_cols=121 Identities=9% Similarity=0.050 Sum_probs=100.4
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh----------chHHHHHHHHHH
Q psy3157 238 TQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY----------KSVYVIFFVRIL 307 (822)
Q Consensus 238 ~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a----------~s~~~l~i~r~l 307 (822)
+.+|.++...|.+.....++.+++..+.+++.+|++.|+++.++.++.+++.+...+. ++.+.++...++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 3589999999999999999999999999999999999999999999888877554321 233344455677
Q ss_pred hhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 308 LGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 308 ~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
.+++.+. ..+...++.+..|++ +..+|++....++|..+|+.+++.+.+..
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7888875 777899999999974 55689999999999999999999998875
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.86 E-value=0.0014 Score=72.34 Aligned_cols=164 Identities=14% Similarity=0.119 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD-LYGRKTILLTCLFTCIVSYLLLG 293 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD-r~Grr~~l~~~~ll~~i~~ll~~ 293 (822)
....++...++...-..+-+|-.+.||++..+...+......|..++-...|++.. |.++++...+++.+..++..+..
T Consensus 214 ~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 214 FVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred HHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 33455556667777788888888999999999999999999999999999998887 67777777788877777666544
Q ss_pred h---hchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhcc---------
Q psy3157 294 L---YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYE--------- 358 (822)
Q Consensus 294 ~---a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~--------- 358 (822)
+ ..+.+.+...-++.|++.|. .....+.+.++..++ +-.+|.+.....++..+|-+++|.+.|..
T Consensus 294 ~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~ 373 (403)
T PF03209_consen 294 LAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPA 373 (403)
T ss_pred HHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 4 45788899999999999997 666678888888654 34589999999999999999999887742
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q psy3157 359 NGFFYICCMTSALFVVNFVY 378 (822)
Q Consensus 359 ~gw~~~f~i~~~~~li~~ll 378 (822)
.+|..+|.+-+++.+++.++
T Consensus 374 ~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 374 LAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 14556666666665555444
No 235
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.83 E-value=3.7e-05 Score=89.41 Aligned_cols=169 Identities=11% Similarity=0.007 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee--ecc-cCccchhHHHHHHHHHHH
Q psy3157 587 YWGIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDS-RNSYSSLYYSFILLTVSI 663 (822)
Q Consensus 587 ~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~-~~~~~~l~~~~~l~~~~~ 663 (822)
+|.++...++-.++++.+...++.|+++.+|++..+++++.+.......+..++.| .|+ .++++.+..+.++.+++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 46666667777788888888899999999999999888777777766667667777 454 477777888888888877
Q ss_pred HHHHhhhHHHH-HHHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchh
Q psy3157 664 LALYVSVNLYL-FVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQ 742 (822)
Q Consensus 664 ~~l~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (822)
+.+.+..+... +.+..+..+ .+.+...|.- +
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~-ig~g~~~~~~-----------------------------------------------~ 127 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIA-VGNGLFKANP-----------------------------------------------A 127 (489)
T ss_pred HHHHHhccchhHHHHHHHHHH-hccccccCCH-----------------------------------------------H
Confidence 76666543222 212222211 1111111100 0
Q ss_pred hhhhhcccCcc-ccchhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 743 IFAIQKCQGDV-FGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 743 ~~~~~~~~g~~-~~~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
.+..+....++ +...++++++...++|.++||.++|++.++.| |.+.|+++.+..+++++.
T Consensus 128 ~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g--w~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 128 SLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG--YSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC--hHHHHHHHHHHHHHHHHH
Confidence 01111111111 11248999999999999999999999999875 777788876655555443
No 236
>KOG2533|consensus
Probab=97.69 E-value=0.00017 Score=83.07 Aligned_cols=157 Identities=16% Similarity=0.116 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDL----YGRKTILLTCLFTCIVS 288 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr----~Grr~~l~~~~ll~~i~ 288 (822)
..++..++.....+.+..++|.|+.+..|++..+.+.+...+.++.+++.+++|+++|| ..+|..+.....+..+.
T Consensus 277 ~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~ 356 (495)
T KOG2533|consen 277 PFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAII 356 (495)
T ss_pred HHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 56667777777777788888889987567999999999999999999999999999999 66777666655555444
Q ss_pred H-HHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchH---HHHHHHHHHH-HHHHHHHHHHHHHhcccchH
Q psy3157 289 Y-LLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKA---FSQLMMVTFL-GFFIGPAIGGHVIHYENGFF 362 (822)
Q Consensus 289 ~-ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra---~g~~~~~~~i-G~~igp~l~g~l~~~~~gw~ 362 (822)
. +......+......+.+..+.+.+. .+.+.....+......|+ .+....+.+. |.+.+++..+.....+ +|.
T Consensus 357 g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y-~~~ 435 (495)
T KOG2533|consen 357 GAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY-GWG 435 (495)
T ss_pred HHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch-hhh
Confidence 4 3333333233333322333333333 566666666666554443 2333333333 3333444444444444 777
Q ss_pred HHHHHHHH
Q psy3157 363 YICCMTSA 370 (822)
Q Consensus 363 ~~f~i~~~ 370 (822)
+.|+....
T Consensus 436 ~~f~~~~~ 443 (495)
T KOG2533|consen 436 AVFYMLVA 443 (495)
T ss_pred hHHHHHHH
Confidence 77744333
No 237
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.67 E-value=0.00041 Score=59.50 Aligned_cols=76 Identities=20% Similarity=0.147 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHH
Q psy3157 225 ASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVI 301 (822)
Q Consensus 225 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l 301 (822)
-..+.|.+|. ++++.++|..+.||+.+..++|+.+|++...++.++..+++.+..+++...+..+.+++.++++.+
T Consensus 8 RFayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 8 RFAYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 3445666775 555799999999999999999999999999999999888999999999999999999998887655
No 238
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.61 E-value=0.012 Score=66.65 Aligned_cols=170 Identities=16% Similarity=0.173 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~ 292 (822)
.++...++...+--..--..+.++.+-+.-+.--.+...-.-.+..++.++..|.+.||..|.+++..+.++--++..+.
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s 85 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAAS 85 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHH
Confidence 45556666666655555556666666555454445555555667777888999999999999988776654432222221
Q ss_pred H------hh--c----hHHHHHHH---HHHhhcccch--hhHHHHHHHHhccc----c----chHHHHHHHHHHHHHHHH
Q psy3157 293 G------LY--K----SVYVIFFV---RILLGLFKHT--QVLCKAYISDICVD----S----TKAFSQLMMVTFLGFFIG 347 (822)
Q Consensus 293 ~------~a--~----s~~~l~i~---r~l~Gig~g~--~~~~~~~i~e~~p~----~----~ra~g~~~~~~~iG~~ig 347 (822)
. +. . +-+....+ -.+.|.-.-. .....++=-||... + .+..+.+.-.--+.-++|
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~cklla 165 (432)
T PF06963_consen 86 CALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLA 165 (432)
T ss_pred HHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 1 11 1 11222221 1222211111 12222333455432 1 123455555556789999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhc
Q psy3157 348 PAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVV 383 (822)
Q Consensus 348 p~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~ 383 (822)
|++.|.+.+.. +......+.++..++..++-++++
T Consensus 166 Pl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~~l 200 (432)
T PF06963_consen 166 PLFVGLLMTFA-SPVIAAIFIAGWNLASVFVEYFLL 200 (432)
T ss_pred HHHHHHHhhcc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999876 888888888888887776644443
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.60 E-value=0.0028 Score=61.47 Aligned_cols=107 Identities=10% Similarity=0.075 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcc
Q psy3157 249 AIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICV 327 (822)
Q Consensus 249 ~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p 327 (822)
.-.++.+....+.+++.+.+.+++|.|+.+++|.+...+..+.. +-++.+.++.+-++.|++.+. ++....++.+..+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 34556666777888889999999999999999998887655543 456788889999999999997 8888889999887
Q ss_pred c--cchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3157 328 D--STKAFSQLMMVTFLGFFIGPAIGGHVIH 356 (822)
Q Consensus 328 ~--~~ra~g~~~~~~~iG~~igp~l~g~l~~ 356 (822)
+ ++|..+++-.....+.++|.++.-++..
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 4566888777777788888777665543
No 240
>KOG3762|consensus
Probab=97.55 E-value=0.0004 Score=78.31 Aligned_cols=73 Identities=25% Similarity=0.491 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH-HHHHHHHHHHHHHHHHHhh
Q psy3157 222 LFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKT-ILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 222 ~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~-~l~~~~ll~~i~~ll~~~a 295 (822)
....+.+.|.++.|..+ +|+++.+.|.+++.--+..+++.|++|+++||+-+|+ .++.+++....+.++..+.
T Consensus 24 ~~~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 24 GARFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred eecccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 34556678999999987 9999999999999999999999999999999998655 4555666666666666664
No 241
>KOG0254|consensus
Probab=97.49 E-value=0.0015 Score=76.57 Aligned_cols=164 Identities=13% Similarity=0.194 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchH----
Q psy3157 223 FAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSV---- 298 (822)
Q Consensus 223 ~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~---- 298 (822)
.+......+.+.+++. .|.+... .+...+..+...++..+..++.||+|||+.++.+.+.+.++.++.+.....
T Consensus 309 tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~ 386 (513)
T KOG0254|consen 309 TGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYY 386 (513)
T ss_pred hCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccC
Confidence 3334444445554443 5555332 455555666677777888999999999999999999999988887653211
Q ss_pred ----------HHHHHHHHHhhcccchhhHHHHHHHHhccccchH--HHHHHHHHHH-HHHHHHHHHHHHHhcccchHHHH
Q psy3157 299 ----------YVIFFVRILLGLFKHTQVLCKAYISDICVDSTKA--FSQLMMVTFL-GFFIGPAIGGHVIHYENGFFYIC 365 (822)
Q Consensus 299 ----------~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~~~ra--~g~~~~~~~i-G~~igp~l~g~l~~~~~gw~~~f 365 (822)
....++.++..+..|..++.+.+.+|.+|.+.|. .++......+ ...+ ....-.+.... ++...|
T Consensus 387 ~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~-~~~~~f 464 (513)
T KOG0254|consen 387 PNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEAL-GIGGTF 464 (513)
T ss_pred CCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhc-cccchH
Confidence 1112223333334444566668889999987664 3332222222 2222 11111122221 235566
Q ss_pred HHHHHHHHHHHH-HHhhhcccCCCCc
Q psy3157 366 CMTSALFVVNFV-YTYWVVTDVKKYP 390 (822)
Q Consensus 366 ~i~~~~~li~~l-l~~~~~~e~~~~~ 390 (822)
...++++.+..+ ..++++||++...
T Consensus 465 ~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 465 GYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred HHHHHHHHHHHHHHheEEcccCCCCc
Confidence 666666666666 5678889887643
No 242
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.44 E-value=8.7e-07 Score=101.74 Aligned_cols=149 Identities=16% Similarity=0.220 Sum_probs=95.4
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH--h---hch----HHHHHHHHHHh-
Q psy3157 239 QVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG--L---YKS----VYVIFFVRILL- 308 (822)
Q Consensus 239 ~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~--~---a~s----~~~l~i~r~l~- 308 (822)
..+.+.. -+......+...++.++..++.||+|||++++.+.++.+++.+..+ . .++ -...+++-.+.
T Consensus 282 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 359 (451)
T PF00083_consen 282 NAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFF 359 (451)
T ss_pred ccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 3555544 1223334455556777778999999999999999888877777664 1 112 11112222222
Q ss_pred -hcccchhhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhccc
Q psy3157 309 -GLFKHTQVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTD 385 (822)
Q Consensus 309 -Gig~g~~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e 385 (822)
+++.|..+....+.+|.+|.+.| +.|+......++.+++|.+...+.+.. +-...+.+.+++.++..+..++++||
T Consensus 360 ~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~-~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 360 AFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL-GGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccchhhHHHHHHHHhheeEEEee
Confidence 22223356667888999998655 577777777788888888777776664 32445666666666777777888999
Q ss_pred CCCCc
Q psy3157 386 VKKYP 390 (822)
Q Consensus 386 ~~~~~ 390 (822)
++...
T Consensus 439 T~g~~ 443 (451)
T PF00083_consen 439 TKGKT 443 (451)
T ss_pred CCCCC
Confidence 87643
No 243
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.40 E-value=0.0033 Score=73.79 Aligned_cols=139 Identities=17% Similarity=0.006 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSN---FTIGAIASTFSLLQIISAPTVGYLSDLYGR-KTILLTCLFTCIVSYLL 291 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~---~~~g~~~s~~~l~~~ig~~~~G~LsDr~Gr-r~~l~~~~ll~~i~~ll 291 (822)
++.++....+.....+.|......++-+. ...++....+.++..+++.+.|.+.-+++| |+.++++.+++.++..+
T Consensus 317 vi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Ga 396 (599)
T PF06609_consen 317 VISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGA 396 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHH
Confidence 34444444444444455555554555544 356788888899999999999999998886 55556776666654444
Q ss_pred HHh--hchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 292 LGL--YKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDST--KAFSQLMMVTFLGFFIGPAIGGHV 354 (822)
Q Consensus 292 ~~~--a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~--ra~g~~~~~~~iG~~igp~l~g~l 354 (822)
++. .+|....+..-++.|+|.|. ..+......-..|++. -+.|+......+|+.+|..+-.-+
T Consensus 397 ma~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 397 MAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 433 34556666778899998886 4444444444445543 346777777777777776665443
No 244
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.40 E-value=0.00018 Score=67.16 Aligned_cols=130 Identities=12% Similarity=0.161 Sum_probs=75.8
Q ss_pred eEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhccccCCCCccccccccccc
Q psy3157 625 YTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSCKKFKEGEEKPKWAKKDLSFY 702 (822)
Q Consensus 625 ~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 702 (822)
++.+..+++..++.++.| .++.++++.+..+..+..++.+......+.+...+.....+...+....
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------- 70 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALV----------- 70 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-----------
Confidence 456677788888888888 4444555555656666666655555555555444433333311100000
Q ss_pred cccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHhhhhhhhccchhhhHhh
Q psy3157 703 NDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGIISD 782 (822)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~lg~~igP~i~G~i~d 782 (822)
....+..+....++++ +++|+.++...+|..+||.++|++.+
T Consensus 71 -------------------------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 71 -------------------------------------AGAALIADIYPPEERG-VALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred -------------------------------------hHHHHHHHHCChhhhh-HHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 0000111111222233 69999999999999999999999988
Q ss_pred hccCcccchhhHHHHHHHHHHhh
Q psy3157 783 WVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 783 ~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
..+ |...|++..++.+++.++
T Consensus 113 ~~~--~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 113 FLG--WRAPFLFLAILALAAFIL 133 (141)
T ss_pred ccc--hHHHHHHHHHHHHHHHHH
Confidence 654 555566665555555444
No 245
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.39 E-value=0.00037 Score=83.57 Aligned_cols=67 Identities=4% Similarity=0.057 Sum_probs=50.1
Q ss_pred hhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhh
Q psy3157 603 LFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVS 669 (822)
Q Consensus 603 ~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~ 669 (822)
.+.......+.+.+++++.+.|++.+...++..++.++++ .++.++.+.+.++.++.+++.++.+++
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLP 118 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhCh
Confidence 3334444556678899999999999999999999999999 444566666677777777776665543
No 246
>KOG1330|consensus
Probab=97.33 E-value=8.4e-05 Score=82.42 Aligned_cols=151 Identities=11% Similarity=0.115 Sum_probs=108.9
Q ss_pred hhcccCCCccceeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhccccCC
Q psy3157 612 LTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSCKKFKEGE 689 (822)
Q Consensus 612 l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~ 689 (822)
.++.+|.+....|++.....++-+++.+++| .++.+|++.+.++..+-+++.++..++...|++++.-.+.+. +..
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGi-GeA- 136 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGI-GEA- 136 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-
Confidence 4556799999999999999999999999999 444467777777777777777777777777777765544431 100
Q ss_pred CCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHHHHHhhhh
Q psy3157 690 EKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIYNSLTSIA 769 (822)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~lg 769 (822)
.+. .+++.++.....+++++. ++|++|++..+|
T Consensus 137 ---------------------------------s~~-------------~ia~s~IaD~f~~~~Rs~-~~~ify~~ipvG 169 (493)
T KOG1330|consen 137 ---------------------------------SYS-------------PIAPSLIADSFPDDKRSR-VLGIFYFAIPVG 169 (493)
T ss_pred ---------------------------------hhc-------------ccchhHhhhcCcchhhhH-HHHHhhhhcccc
Confidence 000 112223333445666665 999999999999
Q ss_pred hhhccchhhhHhhhccCcccchhhHHHHHHHHHHhhheehhhh
Q psy3157 770 KVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTTRVVMMK 812 (822)
Q Consensus 770 ~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~~~~~~~~ 812 (822)
..+|-+.++++.+.++ .|.+.|.+.+++.++..++..++...
T Consensus 170 sglG~vvgs~va~~~~-~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 170 SGLGYVVGSVVASLTF-WWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred cceeEEeeeeeccCcc-ceEEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999999987 48888999999888777775444443
No 247
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.24 E-value=0.043 Score=63.06 Aligned_cols=121 Identities=7% Similarity=0.112 Sum_probs=87.2
Q ss_pred HHHhcCC-----CHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh----ch--------
Q psy3157 236 LRTQVLL-----SNFTIGAIASTFSLLQIIS-APTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY----KS-------- 297 (822)
Q Consensus 236 l~~~~g~-----s~~~~g~~~s~~~l~~~ig-~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a----~s-------- 297 (822)
++|.+.+ +...+.|+-+...+...+. .++.+++++|++|++++-+....+.+..+++++. .+
T Consensus 29 lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~ 108 (472)
T TIGR00769 29 TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALA 108 (472)
T ss_pred hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHH
Confidence 4555544 4467889988888887776 8999999999999999887777776666665553 11
Q ss_pred -------------------HHHHHHHHHHhhcccch-hh-HHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 298 -------------------VYVIFFVRILLGLFKHT-QV-LCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHV 354 (822)
Q Consensus 298 -------------------~~~l~i~r~l~Gig~g~-~~-~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l 354 (822)
.|...+..+...+.... .+ ..++++.|.+.. ..|-++++..+.++|.++|+.+..++
T Consensus 109 ~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 109 DKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222333333444443 44 678999999975 35789999999999999999998887
Q ss_pred Hh
Q psy3157 355 IH 356 (822)
Q Consensus 355 ~~ 356 (822)
.+
T Consensus 189 ~~ 190 (472)
T TIGR00769 189 SK 190 (472)
T ss_pred HH
Confidence 73
No 248
>KOG0252|consensus
Probab=97.22 E-value=0.00013 Score=80.65 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhch----HHHHHHHHHHhhcccc--hhhHHHHHHHHhccccchH
Q psy3157 259 IISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKS----VYVIFFVRILLGLFKH--TQVLCKAYISDICVDSTKA 332 (822)
Q Consensus 259 ~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s----~~~l~i~r~l~Gig~g--~~~~~~~~i~e~~p~~~ra 332 (822)
+.|-.+..++.|++|||++.+.|.+++++..+..+...| -..++++..+..++.. .-.....+.+|.+|.|.|+
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhh
Confidence 335666778999999999999999999999999888765 2334444444444432 2344456678999998775
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHh-----cccchHHHHHHHHHHHHHHHHHHhhhcccCCCCc
Q psy3157 333 --FSQLMMVTFLGFFIGPAIGGHVIH-----YENGFFYICCMTSALFVVNFVYTYWVVTDVKKYP 390 (822)
Q Consensus 333 --~g~~~~~~~iG~~igp~l~g~l~~-----~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~~ 390 (822)
.|+.....-+|.++|...-.++.+ .. +.+++|++.+.+.++..+. -+++||++.+.
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~-T~l~pEtk~~~ 504 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILF-TLLIPETKGKS 504 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHhe-eEEeecccccC
Confidence 677788888899999888888887 44 8899999999988877666 45667776543
No 249
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.22 E-value=0.00044 Score=78.17 Aligned_cols=154 Identities=10% Similarity=0.111 Sum_probs=102.5
Q ss_pred hhhHHhhhcccCCCccc-eeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhh
Q psy3157 606 SNYISVLTHNFHANSQV-TGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVSC 682 (822)
Q Consensus 606 ~~~~~~l~~~~g~s~~~-~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 682 (822)
+...+++.+.+|++..+ .|.+.++...+..+..+..| .|+.+.++.+..+.+.-++..++++++.+.+.+.+.-++.
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll 125 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY 125 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456777888999999 99999999999999999999 4444556556666666666666666766666666655555
Q ss_pred hccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCccccchhhhHH
Q psy3157 683 KKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFGSNISGIY 762 (822)
Q Consensus 683 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Gi~ 762 (822)
+.+-+ +.|+ .. .++..-.+..+++ ++.|+.
T Consensus 126 GvaEA----~~~A-----------------------------~~----------------syI~~WfP~kER~-ratsi~ 155 (511)
T TIGR00806 126 SVTMA----ARIA-----------------------------YS----------------SYIFSLVPPSRYQ-RAAAYS 155 (511)
T ss_pred HHHHH----HHHH-----------------------------HH----------------HHHHHHCCHHHHH-HHHHHH
Confidence 43221 1111 00 0111111233444 599999
Q ss_pred HHHhhhhhhhccchhhhHhhhccC-cccchhhHHHHHHHHHHhhheehh
Q psy3157 763 NSLTSIAKVITPLLGGIISDWVQD-NYKVTFLVAFLFGAVGVVTTRVVM 810 (822)
Q Consensus 763 ~~~~~lg~~igP~i~G~i~d~~~~-~~~~~f~~~~~~~l~~~~~~~~~~ 810 (822)
++...+|.+++|++++++.. +|. .|....+++.....+++++..++.
T Consensus 156 ~sg~~vG~~Ia~~L~qll~s-~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 156 RAAVLLGVFLSSVLGQLLVT-LGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999554 332 456567777777777777654444
No 250
>PRK03612 spermidine synthase; Provisional
Probab=97.16 E-value=0.031 Score=65.33 Aligned_cols=161 Identities=13% Similarity=0.093 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHH-HHHHHHHh
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILL-TCLFTCI-VSYLLLGL 294 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~-~~~ll~~-i~~ll~~~ 294 (822)
..++.+++....--.....+...+|-+....+.+.+++.+|..+|+.++|++.++.-++...+ ++..+.+ ++..+...
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~ 101 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYA 101 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333433333333333333455568889999999999999999999999998874433332222 1111111 11111111
Q ss_pred hch----H-HHHHHHHHHhhcccch-hhHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHHh-cccchHHHHH
Q psy3157 295 YKS----V-YVIFFVRILLGLFKHT-QVLCKAYISDICV-DSTKAFSQLMMVTFLGFFIGPAIGGHVIH-YENGFFYICC 366 (822)
Q Consensus 295 a~s----~-~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p-~~~ra~g~~~~~~~iG~~igp~l~g~l~~-~~~gw~~~f~ 366 (822)
... . ..++...++.|+..|+ .|....+..+... .-++..|.......+|.++|.++.++++- .. |-....+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l-G~~~t~~ 180 (521)
T PRK03612 102 AFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL-GLIRTAA 180 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc-chHHHHH
Confidence 111 1 1223334556666675 6666555555433 23456788888899999999999888764 55 5555555
Q ss_pred HHHHHHHHHHHH
Q psy3157 367 MTSALFVVNFVY 378 (822)
Q Consensus 367 i~~~~~li~~ll 378 (822)
+.+.+.++..++
T Consensus 181 ~~a~l~~~~a~~ 192 (521)
T PRK03612 181 LTGSLNLLAALV 192 (521)
T ss_pred HHHHHHHHHHHH
Confidence 555555444443
No 251
>KOG0255|consensus
Probab=97.15 E-value=0.026 Score=66.22 Aligned_cols=134 Identities=17% Similarity=0.178 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHH---HHHHHHHhhcccch-hhHHHHHHHHhccc--c
Q psy3157 256 LLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYV---IFFVRILLGLFKHT-QVLCKAYISDICVD--S 329 (822)
Q Consensus 256 l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~---l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~ 329 (822)
.....+....+.+.|++|||.....+.++..++.++.++...... ..+...+..++.+. +.....+.+|++|. |
T Consensus 361 ~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 361 LVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 344555566689999999999999999999999999988654332 44444444455553 66669999999997 5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q psy3157 330 TKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVKKYPT 391 (822)
Q Consensus 330 ~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~~~~~ 391 (822)
..+.+.......+|.+++|.+..........+.... .+.+..+..++..+++||+....-
T Consensus 441 ~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 441 NTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL--FGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH--HHHHHHHHHHHHHhcCcccCCCCC
Confidence 556888888999999999988766554322222222 455555555555678888775443
No 252
>KOG2615|consensus
Probab=97.00 E-value=0.0034 Score=68.24 Aligned_cols=155 Identities=19% Similarity=0.181 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHHH
Q psy3157 215 SFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYG--RKTILLTCLFTCIVSYLLL 292 (822)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~G--rr~~l~~~~ll~~i~~ll~ 292 (822)
.+..++....+....-....+..+.+|.++.+.|-+.+...+++.+.+....+..+|.. -+-.+..++.+..-..++.
T Consensus 267 ~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~lll 346 (451)
T KOG2615|consen 267 GLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLL 346 (451)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 33444444444443333333334568999999999999999999999999999999987 6667777777777777777
Q ss_pred HhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Q psy3157 293 GLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTS 369 (822)
Q Consensus 293 ~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~ 369 (822)
+.+.....++++..+-.+..+. .+....++....|..+| .+|+......++-++||+++|.+..+..+=+.++...+
T Consensus 347 s~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~ 426 (451)
T KOG2615|consen 347 SLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWG 426 (451)
T ss_pred hccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehH
Confidence 8888888888888888887775 66777788888887655 48999999999999999999988766533333333333
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.87 E-value=0.046 Score=61.11 Aligned_cols=137 Identities=12% Similarity=0.054 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhc
Q psy3157 248 GAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDIC 326 (822)
Q Consensus 248 g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~ 326 (822)
+.+.-+-.+...+..+.+.++.+|+..+.=+.++.++++++.++.+++++.+.-+++-++.+++.|. -....++ +..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 4466666677778888888999998755445556667888888889999999888899999998885 5555554 4455
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 327 VDSTKAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 327 p~~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
++ +..+-+..+.+.++++|+..-..+....-+.|..+.+...+.++..+..++.+|.++
T Consensus 141 ~~--~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~ 199 (402)
T PF02487_consen 141 GK--SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPP 199 (402)
T ss_pred Cc--cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 54 446667778888888888776655552113466777777666655555455565443
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.53 E-value=0.0011 Score=74.70 Aligned_cols=169 Identities=17% Similarity=0.190 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHhhhcccC----CCccceeeEEehhhhhccccceeee-eccc--CccchhHHHHHHHH
Q psy3157 588 WGIFLIKFLYALAMSLFYSNYISVLTHNFH----ANSQVTGYTVSFQGLVGSFSNVLIH-IDSR--NSYSSLYYSFILLT 660 (822)
Q Consensus 588 ~~~~l~~~l~~~~~~~~~~~~~~~l~~~~g----~s~~~~g~l~si~gi~~~v~~i~~G-~~~~--~~~~~l~~~~~l~~ 660 (822)
+.++..-+.==++++++...+..|+....+ ++.+++.-+.+..+..--+..++.| +.++ ++++++..+.+++.
T Consensus 24 ~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~ 103 (498)
T COG3104 24 YLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMA 103 (498)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 555555555566777777777778877766 9988886666666555555566666 4444 78888999999999
Q ss_pred HHHHHHHhhh--HHHHHHHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccc
Q psy3157 661 VSILALYVSV--NLYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNL 738 (822)
Q Consensus 661 ~~~~~l~~~~--~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (822)
++.+++.... ....+.+.+++.. .+.|--+|.- +.++
T Consensus 104 iGh~~L~~~~~~~~~gl~i~L~~I~-iG~Gl~K~Ni-------------S~ll--------------------------- 142 (498)
T COG3104 104 IGHLVLAISSVSGPGGLYIGLALII-VGTGLFKPNI-------------SSLL--------------------------- 142 (498)
T ss_pred HHHHHHhccccccccHHHHHHHHHH-hccccccccH-------------HHHH---------------------------
Confidence 9988887663 2333333222222 1222222211 1111
Q ss_pred cchhhhhhhcccCccccchhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 739 DLGQIFAIQKCQGDVFGSNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 739 ~~~~~~~~~~~~g~~~~~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
++.+. .++-+....++++++..++|++++|++.|++.++.| |...|..+++..++|++.
T Consensus 143 --g~ly~----~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g--~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 143 --GELYP----KDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYG--WHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred --HHhcC----CCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHH
Confidence 11110 111112237888888899999999999999999886 777799988888888776
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.15 E-value=0.024 Score=63.55 Aligned_cols=103 Identities=11% Similarity=0.135 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhc---------hHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc-----chHHHHHHHHH
Q psy3157 276 TILLTCLFTCIVSYLLLGLYK---------SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS-----TKAFSQLMMVT 340 (822)
Q Consensus 276 ~~l~~~~ll~~i~~ll~~~a~---------s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~-----~ra~g~~~~~~ 340 (822)
+++.++.++..+|.++..++. +.+.++++.++.++|.|. =+...++.+|.++++ .+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567778888888888844431 236788888999999987 688899999999753 23578899999
Q ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 341 FLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 341 ~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
++|..+++.+.+++-+.. ||.+.|.+.++..+++.+..
T Consensus 82 n~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHH
Confidence 999999999999998887 99999999988887776653
No 256
>KOG2816|consensus
Probab=96.10 E-value=0.045 Score=62.83 Aligned_cols=126 Identities=20% Similarity=0.275 Sum_probs=108.8
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcc
Q psy3157 233 NNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVG-YLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLF 311 (822)
Q Consensus 233 ~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G-~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig 311 (822)
+.|+...++++..+.+.+.+...+...+++.+.. .+...+|-|+++..|++.-.+..++.+++++.|+++...++.++.
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA 344 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh
Confidence 3456667999999999999998888888888776 788889999999999999999999999999999999999988887
Q ss_pred cchhhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy3157 312 KHTQVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 312 ~g~~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~~ 358 (822)
....+...++++.+..+ ++++.++......+..+++|.+-+.+...+
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 77788888999998875 466799999999999999999888776544
No 257
>KOG1237|consensus
Probab=96.10 E-value=0.13 Score=60.70 Aligned_cols=162 Identities=14% Similarity=0.085 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhh
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLY-GRKTILLTCLFTCIVSYLLLGLY 295 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~-Grr~~l~~~~ll~~i~~ll~~~a 295 (822)
...+...+...+..-+-.|+...++.+...+.-....+.-......+++++++|-| ||-+++.++.++..++.++..++
T Consensus 45 ~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~ 124 (571)
T KOG1237|consen 45 NEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLS 124 (571)
T ss_pred HHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444544455566688888998887777778888777888889999999975 88888888888887776554432
Q ss_pred ch-------------------------HHHHHHHHHHhhcccch-hhHHHHHHHHhccc---cc-----hHHHHHHHHHH
Q psy3157 296 KS-------------------------VYVIFFVRILLGLFKHT-QVLCKAYISDICVD---ST-----KAFSQLMMVTF 341 (822)
Q Consensus 296 ~s-------------------------~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~---~~-----ra~g~~~~~~~ 341 (822)
.. ...++.+.-+..+|.|. -+...++-+|-++. +. +.+.++....+
T Consensus 125 a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~ 204 (571)
T KOG1237|consen 125 AMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQN 204 (571)
T ss_pred HHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHH
Confidence 11 12455556666677776 67778888898873 22 23677788888
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Q psy3157 342 LGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 342 iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
+|..++-.+.-++-+.. ||.+.|.+..++.+++.++.
T Consensus 205 ~g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 205 GGALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHH
Confidence 88888877777776665 99999998888877766553
No 258
>PTZ00207 hypothetical protein; Provisional
Probab=96.07 E-value=0.061 Score=63.53 Aligned_cols=133 Identities=11% Similarity=0.054 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhC--------ChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHH
Q psy3157 250 IASTFSLLQIISAPTVGYLSDLYG--------RKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKA 320 (822)
Q Consensus 250 ~~s~~~l~~~ig~~~~G~LsDr~G--------rr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~ 320 (822)
++++..++..+|.+..|.+....- +|++.+....++.++.++..+.-....+++..++.|++.|+ ++....
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~ 475 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIAL 475 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHH
Confidence 788899999999999998872211 22333333333666666666654446899999999999997 899999
Q ss_pred HHHHhccccch--HHHHHHHHHHHHHHHH-HHHHHHHHhcc------------cchHHHHHHHHHHHHHHHHHHhhhc
Q psy3157 321 YISDICVDSTK--AFSQLMMVTFLGFFIG-PAIGGHVIHYE------------NGFFYICCMTSALFVVNFVYTYWVV 383 (822)
Q Consensus 321 ~i~e~~p~~~r--a~g~~~~~~~iG~~ig-p~l~g~l~~~~------------~gw~~~f~i~~~~~li~~ll~~~~~ 383 (822)
+++|+|. +.- -+.+......+|..+- -.+.|.+.+.- .=++..|.+.++++++++++..++.
T Consensus 476 i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 476 VTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 9999998 433 2455555566665553 45666666532 1168889999988888887755444
No 259
>KOG2325|consensus
Probab=95.88 E-value=0.024 Score=64.72 Aligned_cols=84 Identities=17% Similarity=0.305 Sum_probs=67.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhhHHhhhcc-cCCCccceeeEEehhhhhccccceeee-ecccCc--cchhHHHHHH
Q psy3157 583 DWSAYWGIFLIKFLYALAMSLFYSNYISVLTHN-FHANSQVTGYTVSFQGLVGSFSNVLIH-IDSRNS--YSSLYYSFIL 658 (822)
Q Consensus 583 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~-~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~~~--~~~l~~~~~l 658 (822)
+|+..|...+..++.+.-++.+.+..-+|+++. .+.+.+..|++.+...++.++.++..| ...+.. +++++.++++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 466678888888999988888888888888774 377888889999999999999999999 444433 6778888888
Q ss_pred HHHHHHHH
Q psy3157 659 LTVSILAL 666 (822)
Q Consensus 659 ~~~~~~~l 666 (822)
++++.++.
T Consensus 112 ~~~g~llY 119 (488)
T KOG2325|consen 112 AIIGNLLY 119 (488)
T ss_pred HHHHHHHH
Confidence 88887765
No 260
>KOG3098|consensus
Probab=95.51 E-value=0.21 Score=56.87 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhcccc
Q psy3157 251 ASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDS 329 (822)
Q Consensus 251 ~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~ 329 (822)
.++.+....+.+++.+.+.|+.|.|+.+.++.....+..+.+.+. |-+.+++..++.|+|.+. +.....++++..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 677778888999999999999999999999998887776655544 566778889999999997 888889999988764
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHH
Q psy3157 330 --TKAFSQLMMVTFLGFFIGPAIGG 352 (822)
Q Consensus 330 --~ra~g~~~~~~~iG~~igp~l~g 352 (822)
+|..++.-.....+.++|..+..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 56677766666666666655443
No 261
>KOG2563|consensus
Probab=95.10 E-value=0.052 Score=60.63 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=90.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHHHHHhhc----hHHHHHHHHHHhhcccch
Q psy3157 240 VLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGR-KTILLTCLFTCIVSYLLLGLYK----SVYVIFFVRILLGLFKHT 314 (822)
Q Consensus 240 ~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Gr-r~~l~~~~ll~~i~~ll~~~a~----s~~~l~i~r~l~Gig~g~ 314 (822)
-|.+....|++.....++.++++.+.|.+.||... |.++++......++.+.....+ ..+.++....+.|++...
T Consensus 296 sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~ 375 (480)
T KOG2563|consen 296 SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTG 375 (480)
T ss_pred ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcC
Confidence 46666788999999999999999999999999874 4555555555555532222221 234445555666666644
Q ss_pred -hhHHHHHHHHhc-cc-cchHHHHHHHHHHHHHHHHHHHHHHHHhccc--chHH-HHHHHHHHHHHHHHHHhhhcccCC
Q psy3157 315 -QVLCKAYISDIC-VD-STKAFSQLMMVTFLGFFIGPAIGGHVIHYEN--GFFY-ICCMTSALFVVNFVYTYWVVTDVK 387 (822)
Q Consensus 315 -~~~~~~~i~e~~-p~-~~ra~g~~~~~~~iG~~igp~l~g~l~~~~~--gw~~-~f~i~~~~~li~~ll~~~~~~e~~ 387 (822)
+|....+-.|.. |. ++-..|+.++...+-+++-.++-+...+..+ +|.+ .-+..+...++.+++..++.|+.+
T Consensus 376 ~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 376 YLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred CCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 777777777754 54 4445777777666666666666676666542 2333 233333334444444445544433
No 262
>KOG3574|consensus
Probab=95.00 E-value=1.9 Score=47.49 Aligned_cols=136 Identities=16% Similarity=0.178 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhCChHHHHH-HHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD-----LYGRKTILLT-CLFTCI 286 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD-----r~Grr~~l~~-~~ll~~ 286 (822)
.+.+.+.+.+.-.+.+. .+|..++. -|.|.++.+....+ +..+ .--++|.++.| |+|||+..++ +..+.+
T Consensus 35 lLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~a-y~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG 110 (510)
T KOG3574|consen 35 LLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFA-YWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLG 110 (510)
T ss_pred HHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhh-hhHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHHH
Confidence 45556666655555555 67766663 68888777654332 2332 34578999999 9999987653 333333
Q ss_pred HHHHHHHhh-----------chHHHHHHHHHHhhcccchh-hHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 287 VSYLLLGLY-----------KSVYVIFFVRILLGLFKHTQ-VLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAIGGHV 354 (822)
Q Consensus 287 i~~ll~~~a-----------~s~~~l~i~r~l~Gig~g~~-~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l~g~l 354 (822)
...++.+.. ++...+....++.-+..+.. .+.-.+.-.+..++. .|..+.+..+|.-.|.++++.+
T Consensus 111 ~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~--lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 111 LFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN--LGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--cCchhHHHHHHHhhhHHhhcce
Confidence 333333221 22222222233333333331 222333333443332 3444566677777777666543
No 263
>KOG4332|consensus
Probab=94.68 E-value=0.03 Score=58.04 Aligned_cols=104 Identities=22% Similarity=0.165 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q psy3157 224 AASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFF 303 (822)
Q Consensus 224 ~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i 303 (822)
+-....|++- |+.+.+++...++|.+..+.+...++.+.+.|-++|+-|||+.-+.-++...+++ +.-.++.+-.+++
T Consensus 52 gDWLQgPYvY-yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmV 129 (454)
T KOG4332|consen 52 GDWLQGPYVY-YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMV 129 (454)
T ss_pred hhhhcCceee-eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEee
Confidence 3334445443 4455688888899988877777788888999999999999996554443333322 2334678889999
Q ss_pred HHHHhhcccch-hhHHH-HHHHHhcccc
Q psy3157 304 VRILLGLFKHT-QVLCK-AYISDICVDS 329 (822)
Q Consensus 304 ~r~l~Gig~g~-~~~~~-~~i~e~~p~~ 329 (822)
+|++.|+..+. ++..- -++.|..++|
T Consensus 130 GR~LGGiaTsLLFSaFEsWliaEHnekr 157 (454)
T KOG4332|consen 130 GRVLGGIATSLLFSAFESWLIAEHNEKR 157 (454)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999999885 55553 4566766554
No 264
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.52 E-value=0.02 Score=68.59 Aligned_cols=157 Identities=12% Similarity=0.102 Sum_probs=87.7
Q ss_pred hhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee--eccc-CccchhHHHHHHHHHHHHHHHhhhH--------
Q psy3157 603 LFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSR-NSYSSLYYSFILLTVSILALYVSVN-------- 671 (822)
Q Consensus 603 ~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~-~~~~~l~~~~~l~~~~~~~l~~~~~-------- 671 (822)
++...+..|+.+.+|++...+..+........-+..++.| .|++ ++++.+.++.++..++.+++.+...
T Consensus 5 Gm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~ 84 (654)
T TIGR00926 5 GMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLH 84 (654)
T ss_pred ecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchH
Confidence 3345556677777788887776555555555556666666 3333 6666667777776666665554311
Q ss_pred HHHHHHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccC
Q psy3157 672 LYLFVLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQG 751 (822)
Q Consensus 672 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 751 (822)
....++. +.....+.|.-+|.. .....++- + + ..
T Consensus 85 ~~~~l~g-LaLia~G~GgiKp~v---------------------------------saf~gdqf---~--------~-~~ 118 (654)
T TIGR00926 85 DLLDLLG-LALIALGTGGIKPCV---------------------------------SAFGGDQF---E--------E-RQ 118 (654)
T ss_pred HHHHHHH-HHHHHhhccccccCc---------------------------------hhhhHhhc---C--------c-cc
Confidence 0111111 111112222222221 11111111 0 0 01
Q ss_pred ccccchhhhHHHHHhhhhhhhccchhhhHhhhcc-----CcccchhhHHHHHHHHHHhh
Q psy3157 752 DVFGSNISGIYNSLTSIAKVITPLLGGIISDWVQ-----DNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 752 ~~~~~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~-----~~~~~~f~~~~~~~l~~~~~ 805 (822)
.+...+.+-++.++.++|+++++++.+++.+..+ ..|...|.+++++.++++++
T Consensus 119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 119 LSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 1223358899999999999999999999986542 13666688888777777665
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.09 E-value=0.42 Score=54.71 Aligned_cols=145 Identities=10% Similarity=0.165 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-hc---------hHHHHHHHHHHhhcc
Q psy3157 242 LSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL-YK---------SVYVIFFVRILLGLF 311 (822)
Q Consensus 242 ~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~-a~---------s~~~l~i~r~l~Gig 311 (822)
++....|.+..+..++.++|..+..+..-++.-|+++.++.++.++..+.-.. .+ +.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 88888888888888888888888888777778888888777766655544222 11 112222223444444
Q ss_pred cch-hhHHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHhccc-------chHHHHHHHHHHHHHHHHHHhh
Q psy3157 312 KHT-QVLCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIHYEN-------GFFYICCMTSALFVVNFVYTYW 381 (822)
Q Consensus 312 ~g~-~~~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~~~~-------gw~~~f~i~~~~~li~~ll~~~ 381 (822)
.+. +.+...+++++.|+. +..+|++....++|..++..++..+.+..+ +..+..++..++.++.+.+ ..
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~l-l~ 410 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPL-LF 410 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHH-HH
Confidence 444 667788899999984 555888888889999888888888876541 2344455555555444444 34
Q ss_pred hcccCC
Q psy3157 382 VVTDVK 387 (822)
Q Consensus 382 ~~~e~~ 387 (822)
++|+..
T Consensus 411 lLp~~~ 416 (433)
T PF03092_consen 411 LLPPQK 416 (433)
T ss_pred HcCCCc
Confidence 455533
No 266
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.41 E-value=0.26 Score=55.18 Aligned_cols=108 Identities=13% Similarity=0.180 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH--HH---HHHHHHHhhchHHHHHHHHHHhhcccch-hhH
Q psy3157 244 NFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFT--CI---VSYLLLGLYKSVYVIFFVRILLGLFKHT-QVL 317 (822)
Q Consensus 244 ~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll--~~---i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~ 317 (822)
..+..+...++.+|.+++.--...+ |+ |++.+.+.+- .. +...+.-+.++.|.+++..+.-|+..|+ +..
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 4566677777777766664332221 33 3333333222 22 2222233467888888889999999986 888
Q ss_pred HHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 318 CKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHVI 355 (822)
Q Consensus 318 ~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l~ 355 (822)
....+.+-.+++.| ++|....+-++|..++.+++-.+-
T Consensus 356 tF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 356 TFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88888887776544 788888888888888887776553
No 267
>KOG3810|consensus
Probab=92.53 E-value=0.5 Score=51.21 Aligned_cols=128 Identities=13% Similarity=0.218 Sum_probs=86.5
Q ss_pred HHHHHHHH-HhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q psy3157 230 PLVNNYLR-TQVLLSNFTIG-AIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRIL 307 (822)
Q Consensus 230 ~~l~~~l~-~~~g~s~~~~g-~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l 307 (822)
|++..|+. .+.+++..++. -+.-...-.+.+.-.+.=.+.|..--|+++++-.+...+..++..+.++.+.+=+.-+.
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~F 104 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFF 104 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhh
Confidence 44444443 34456655543 11222233344445555568898888998887776667777777788888888777777
Q ss_pred hhcccchhhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3157 308 LGLFKHTQVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVIHY 357 (822)
Q Consensus 308 ~Gig~g~~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~~~ 357 (822)
.|...+.-.+-++++-..+++ ..|+.|....+.-.|-..|..++..++..
T Consensus 105 yG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 105 YGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL 156 (433)
T ss_pred cChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh
Confidence 777776655666777666665 36788888888888888888888887765
No 268
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.22 E-value=0.041 Score=64.67 Aligned_cols=145 Identities=19% Similarity=0.304 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHH
Q psy3157 214 ISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSL-LQIISAPTVGYLSDLYG--RKTILLTCLFTCIVSYL 290 (822)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l-~~~ig~~~~G~LsDr~G--rr~~l~~~~ll~~i~~l 290 (822)
+.+...........+.+++|.|++.+|++++++++++.++..+ +.++|.+++|++..|+. .|.++.+..+...+..+
T Consensus 310 ~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 310 LILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 4455666677777888999999999999999999998877666 46678899999999875 34444433333333322
Q ss_pred H---HHh--hc---------h----------------------------------------HHHHHHHHHHhhcccch-h
Q psy3157 291 L---LGL--YK---------S----------------------------------------VYVIFFVRILLGLFKHT-Q 315 (822)
Q Consensus 291 l---~~~--a~---------s----------------------------------------~~~l~i~r~l~Gig~g~-~ 315 (822)
+ ..+ ++ . +..+++..++.-+..+. .
T Consensus 390 ~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~ 469 (539)
T PF03137_consen 390 LYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQ 469 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcc
Confidence 2 000 00 0 11222222222222232 4
Q ss_pred hHHHHHHHHhccccchH--HHHHHH-HHHHHHHHHHHHHHHHHhcc
Q psy3157 316 VLCKAYISDICVDSTKA--FSQLMM-VTFLGFFIGPAIGGHVIHYE 358 (822)
Q Consensus 316 ~~~~~~i~e~~p~~~ra--~g~~~~-~~~iG~~igp~l~g~l~~~~ 358 (822)
.+...++-+.++++.|+ +|+..+ ..-+|.+-||++-|.++|..
T Consensus 470 ~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 470 VPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------------------------
T ss_pred cchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 45555556777776664 555443 34558888999999888864
No 269
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=92.14 E-value=0.19 Score=52.78 Aligned_cols=149 Identities=18% Similarity=0.227 Sum_probs=85.0
Q ss_pred hhhhHHhhhcccCCCccceeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhh-------HHHHH
Q psy3157 605 YSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSV-------NLYLF 675 (822)
Q Consensus 605 ~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~-------~~~~~ 675 (822)
++.+..-+++.+|++.++...+.....++..+ +++.| .|..+.+..+.++.++..++..+++... +.|..
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~ 99 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLM 99 (250)
T ss_pred hhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHH
Confidence 45566778889999999987666555555554 46667 5556666666778777777776665432 22333
Q ss_pred HHHHHhhhccccCCCCccccccccccccccchhhhhhhhhhccCCccccccccccCCCCCccccchhhhhhhcccCcccc
Q psy3157 676 VLLLVSCKKFKEGEEKPKWAKKDLSFYNDADLERLFDQWEVSLGKDAFCFPHETKHKDPNLNLDLGQIFAIQKCQGDVFG 755 (822)
Q Consensus 676 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 755 (822)
.+.... +..+ ..| +..+.+ ...-++..+.+|
T Consensus 100 ~~~~~l-~~~s-----~~~-------~~ta~l------------------------------------vt~~~NFP~~RG 130 (250)
T PF06813_consen 100 CLFLFL-GGNS-----SCW-------FNTASL------------------------------------VTCVRNFPRSRG 130 (250)
T ss_pred HHHHHH-Hccc-----HHH-------hhhHHH------------------------------------HHHHHhCccccC
Confidence 222221 1111 111 111111 111122344555
Q ss_pred chhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhhh
Q psy3157 756 SNISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVTT 806 (822)
Q Consensus 756 ~~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~~ 806 (822)
+ +.|+.-.+.++++.+-..+.-.+++. +...+.+..+....+++++.+
T Consensus 131 ~-vvgilk~~~GLSaai~t~i~~~~f~~--~~~~fll~la~~~~~v~l~~~ 178 (250)
T PF06813_consen 131 T-VVGILKGFFGLSAAIFTQIYSAFFGD--DPSSFLLFLAVLPAVVCLVAM 178 (250)
T ss_pred c-eehhhhHHHHhHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHh
Confidence 4 99999999999988877777666543 223333445544455555543
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.71 E-value=11 Score=43.28 Aligned_cols=51 Identities=8% Similarity=-0.141 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Q psy3157 297 SVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAFSQLMMVTFLGFFIGPAI 350 (822)
Q Consensus 297 s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~g~~~~~~~iG~~igp~l 350 (822)
.++..++.-++.|++.|. .....++.+ .+|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~--~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST--YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH--HHHHHHhcchhHHHHHHHH
Confidence 355556667777887775 555566655 45543 3444455555655555444
No 271
>KOG3098|consensus
Probab=89.94 E-value=18 Score=41.56 Aligned_cols=134 Identities=18% Similarity=0.270 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhh---hCChHHHHHHHHHHHHHHH
Q psy3157 217 ICFLDLFAASLIVPLVNNYLRTQ--VLLSN-FTIGAIASTFSLLQIISAPTVGYLSDL---YGRKTILLTCLFTCIVSYL 290 (822)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~l~~~--~g~s~-~~~g~~~s~~~l~~~ig~~~~G~LsDr---~Grr~~l~~~~ll~~i~~l 290 (822)
..+..+...+......|..+.-. .+.+. .-.+.......++..+++.+++.+++| +||++++.++.++..++.+
T Consensus 248 ~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~ 327 (461)
T KOG3098|consen 248 FFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFL 327 (461)
T ss_pred HHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHH
Confidence 33444445555555555433221 22222 223333444555666666777777754 7899999988888877777
Q ss_pred HHHhh------------------chHHHHHHHHHHhhcccch-hhHHHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHH
Q psy3157 291 LLGLY------------------KSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD-STKAFSQLMMVTFLGFFIGPAI 350 (822)
Q Consensus 291 l~~~a------------------~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~-~~ra~g~~~~~~~iG~~igp~l 350 (822)
+.... +++...++..++.|++-++ ....+.+++..+|. +..+.+++..-..++..++-..
T Consensus 328 li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 328 LIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhh
Confidence 76542 1355667778899999887 77888999999965 4556666666666665554433
No 272
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.69 E-value=3.8 Score=46.88 Aligned_cols=66 Identities=14% Similarity=0.060 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhCChHHHHH
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRT-QVLLSNFTIGAIASTFSLLQIISAPTVGYLSD-----LYGRKTILLT 280 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD-----r~Grr~~l~~ 280 (822)
++.+.+++.+.-.+.....+|..+++ .-+.|.++.|... .....+. .-++|.++.| |+|||+..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fS-la~~PfS-lKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFS-LASYPFS-LKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeee-eeechhH-HHHhhhhhhhhhcccccCCcchhhh
Confidence 45566666666555555556655543 1477888877432 2222222 3467777777 7999997664
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.35 E-value=16 Score=42.51 Aligned_cols=114 Identities=10% Similarity=0.118 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh---------ch---------------
Q psy3157 243 SNFTIGAIASTFSLLQ-IISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY---------KS--------------- 297 (822)
Q Consensus 243 s~~~~g~~~s~~~l~~-~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a---------~s--------------- 297 (822)
.++.+.++=....+.. ++...+..+++++++|.+++-+....+.....++++. ++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 4566666655555543 4456788999999999998887766666665555541 11
Q ss_pred -------HHHHHHHHHHhhcccch-hh-HHHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3157 298 -------VYVIFFVRILLGLFKHT-QV-LCKAYISDICVDS--TKAFSQLMMVTFLGFFIGPAIGGHVIH 356 (822)
Q Consensus 298 -------~~~l~i~r~l~Gig~g~-~~-~~~~~i~e~~p~~--~ra~g~~~~~~~iG~~igp~l~g~l~~ 356 (822)
.|.+.+..++.-+.... .+ ..+.+..|.++.+ .|-++++..+.++|.+++..+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222222222 22 3477888888653 577999999999999998888888777
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=88.66 E-value=16 Score=41.68 Aligned_cols=122 Identities=14% Similarity=0.043 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---hch-H-HHHH
Q psy3157 228 IVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGL---YKS-V-YVIF 302 (822)
Q Consensus 228 ~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~---a~s-~-~~l~ 302 (822)
+.+.+..|+.. .|++...+|..-+...+..+.+.....++.+|+|..+.=+++...-.++..++.. ++. . ...-
T Consensus 277 f~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s 355 (432)
T PF06963_consen 277 FGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSIS 355 (432)
T ss_pred CcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH
Confidence 45566668877 4999999999999999999999999999999999887766665544433333222 111 1 1222
Q ss_pred HHHHHhhcccc------hhhHHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHH
Q psy3157 303 FVRILLGLFKH------TQVLCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAI 350 (822)
Q Consensus 303 i~r~l~Gig~g------~~~~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l 350 (822)
+..++.|+..+ .=....-++.|..|++.|+ .|.-+...++--.+-..+
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 22333343332 2234466777888876664 566555555555444333
No 275
>PF12832 MFS_1_like: MFS_1 like family
Probab=87.21 E-value=0.23 Score=42.01 Aligned_cols=59 Identities=14% Similarity=0.194 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee-eccc-Cccch
Q psy3157 592 LIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-IDSR-NSYSS 651 (822)
Q Consensus 592 l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~-~~~~~ 651 (822)
+..++...+...++++++.|+.+ .|+++.++|.+.++.-+...++.++.| +.++ ++.+.
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 44566666777788889999976 799999999999999999999999999 4444 44443
No 276
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=86.65 E-value=2.2 Score=46.83 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=46.1
Q ss_pred hhhhHHhhhcccCCCccceeeEEehhhhhccccceeee--ecccCccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Q psy3157 605 YSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH--IDSRNSYSSLYYSFILLTVSILALYVSVNLYLFVLLLVS 681 (822)
Q Consensus 605 ~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G--~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 681 (822)
+..+...+-+.+|+++.+++.+.......+.+.+.+.| .|+.++++..+...++.+++++. -..++.+..++.-++
T Consensus 53 QGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvl 130 (354)
T PF05631_consen 53 QGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVL 130 (354)
T ss_pred hcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHH
Confidence 33344444467899999999888777777777777788 55556665554444555555442 233455555444333
No 277
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=84.62 E-value=47 Score=38.23 Aligned_cols=122 Identities=10% Similarity=0.129 Sum_probs=79.0
Q ss_pred HHHhcCC---CHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh---------chH----
Q psy3157 236 LRTQVLL---SNFTIGAIASTFSL-LQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLY---------KSV---- 298 (822)
Q Consensus 236 l~~~~g~---s~~~~g~~~s~~~l-~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a---------~s~---- 298 (822)
+++.+.+ .+..+.++-+...+ +.++..++.+++++++.+.+++-+.+..+....+++++. +++
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~ 128 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR 128 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence 4444443 45667777777777 567788899999999999999887777777766666652 110
Q ss_pred -------------------HHHHHHHHHhhcccch-hh-HHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 299 -------------------YVIFFVRILLGLFKHT-QV-LCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGGHVI 355 (822)
Q Consensus 299 -------------------~~l~i~r~l~Gig~g~-~~-~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g~l~ 355 (822)
|...+..++.=+.... .+ .......|.+.. ..|-+++++.+.+++..++..+..++.
T Consensus 129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111111121221 22 345666777764 367899999999999988888887776
Q ss_pred hc
Q psy3157 356 HY 357 (822)
Q Consensus 356 ~~ 357 (822)
..
T Consensus 209 k~ 210 (509)
T COG3202 209 KH 210 (509)
T ss_pred hc
Confidence 53
No 278
>KOG3626|consensus
Probab=83.70 E-value=3.9 Score=49.24 Aligned_cols=67 Identities=13% Similarity=0.251 Sum_probs=49.8
Q ss_pred hhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee-ecccCccchh-HHHHHHHHHHHHHHHhh
Q psy3157 603 LFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH-IDSRNSYSSL-YYSFILLTVSILALYVS 669 (822)
Q Consensus 603 ~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G-~~~~~~~~~l-~~~~~l~~~~~~~l~~~ 669 (822)
.++.....-+.++++++..+.|++.+..-+++.+.-+++. ...++.++++ -.+.++++++.++..+.
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alP 182 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALP 182 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhCh
Confidence 4444445566778999999999999999999999998888 6666555554 56677777776665543
No 279
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=82.46 E-value=47 Score=36.45 Aligned_cols=104 Identities=15% Similarity=0.152 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH----HHHHH---HHHHHH
Q psy3157 218 CFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILL----TCLFT---CIVSYL 290 (822)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~----~~~ll---~~i~~l 290 (822)
+..++..+-.....+..|+ .|-..-+.+.+.+.+...+.+|+...-++.|.--.-+.+. +|++. ..+..+
T Consensus 19 ~aa~GlvyElal~tLatyL---lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~ 95 (508)
T COG4262 19 CAACGLVYELALGTLATYL---LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYL 95 (508)
T ss_pred HHHhHHHHHHHHHHHHHHh---cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHH
Confidence 3333444444444444444 4556677788899998888888888877766432221111 22221 111111
Q ss_pred HHHh--hchHHHHHHHHHHhhcccch-hhHHHHHHHH
Q psy3157 291 LLGL--YKSVYVIFFVRILLGLFKHT-QVLCKAYISD 324 (822)
Q Consensus 291 l~~~--a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e 324 (822)
.+++ .++-+.+++..++.|.-.|. .|..+.++..
T Consensus 96 ~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 96 LFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 2222 24667788888888888888 7887777766
No 280
>KOG3097|consensus
Probab=82.37 E-value=14 Score=40.21 Aligned_cols=73 Identities=15% Similarity=0.142 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhc
Q psy3157 253 TFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDIC 326 (822)
Q Consensus 253 ~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~ 326 (822)
...+..+..+++.+.+..++|.|+++.++........ ..-+-+.+..++......|++.+. +..--++++++-
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 3445556777777899999999999988776654332 222335677888888999999885 544444444443
No 281
>KOG0637|consensus
Probab=81.61 E-value=3.8 Score=46.33 Aligned_cols=129 Identities=13% Similarity=0.006 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhc-
Q psy3157 249 AIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDIC- 326 (822)
Q Consensus 249 ~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~- 326 (822)
|-..++.+...+.+....++++|+|-|+.+..+...+.++..+.++..+.+.....+...|+-.+. ..+-+..++++.
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 556667777788899999999999977777777777888888888888888888888888854442 322222222221
Q ss_pred -----------c---------c--cchH--HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q psy3157 327 -----------V---------D--STKA--FSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFV 377 (822)
Q Consensus 327 -----------p---------~--~~ra--~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~l 377 (822)
| . ++++ .|+.+....+.+++..+..|.+.+..++-+.+-++.+++.+....
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~ 490 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGG 490 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHH
Confidence 1 0 1122 566777777888887777777777765555555555555444433
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.26 E-value=12 Score=42.96 Aligned_cols=106 Identities=10% Similarity=0.107 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHH--HHHHHHHHHHHHHh---------hchHHHHHHHHHHhhcccch
Q psy3157 248 GAIASTFSLLQIISAPTVGYLSDLYGRK--TILLT--CLFTCIVSYLLLGL---------YKSVYVIFFVRILLGLFKHT 314 (822)
Q Consensus 248 g~~~s~~~l~~~ig~~~~G~LsDr~Grr--~~l~~--~~ll~~i~~ll~~~---------a~s~~~l~i~r~l~Gig~g~ 314 (822)
-....++.++-.+|..+..+.. .-++| ++++. +=+++....+++.. -++-+..++..++.|+..|.
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3556667777777776544321 11222 33332 22223333333322 23556677778999999995
Q ss_pred -hhHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHHH
Q psy3157 315 -QVLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGHV 354 (822)
Q Consensus 315 -~~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~l 354 (822)
.+..+.+..+..+++.| +..+...+..+|..+|..++-.+
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777776544 45556666667777777665433
No 283
>KOG3880|consensus
Probab=77.61 E-value=8.1 Score=41.52 Aligned_cols=131 Identities=9% Similarity=0.011 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccccchHH
Q psy3157 255 SLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVDSTKAF 333 (822)
Q Consensus 255 ~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~~~ra~ 333 (822)
.+...+..+.+..+.||+.--.=..+..++.+.+.++.+++++.++-+.+-.+..++.|. -....++ +..+++. ..
T Consensus 72 ilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~l-ss~Y~~~--~i 148 (409)
T KOG3880|consen 72 ILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLAL-SSRYPSI--VI 148 (409)
T ss_pred hhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhh-hccCCCc--ee
Confidence 344444555556667775422223344556677778888899999888888888887774 3322222 2223321 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHHHHHhhhcccCCC
Q psy3157 334 SQLMMVTFLGFFIGPAIGGHVIHYE-NGFFYICCMTSALFVVNFVYTYWVVTDVKK 388 (822)
Q Consensus 334 g~~~~~~~iG~~igp~l~g~l~~~~-~gw~~~f~i~~~~~li~~ll~~~~~~e~~~ 388 (822)
+.+..+.+.++++|..--.++.+.. -+-+....+...+.++.+...++.+++++.
T Consensus 149 ~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes 204 (409)
T KOG3880|consen 149 AGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPES 204 (409)
T ss_pred ccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcc
Confidence 3334444445555554434444422 145666777666665555554555555443
No 284
>PRK03612 spermidine synthase; Provisional
Probab=76.86 E-value=3.3 Score=48.56 Aligned_cols=54 Identities=6% Similarity=-0.041 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeee
Q psy3157 589 GIFLIKFLYALAMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIH 642 (822)
Q Consensus 589 ~~~l~~~l~~~~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G 642 (822)
.+++..|+.+++...+-....-++...+|-+....+.++++.-.+..+|..+.+
T Consensus 18 ~l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~ 71 (521)
T PRK03612 18 LLLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSK 71 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566677777777776666677777788877777777666666666666555
No 285
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=71.48 E-value=1.2 Score=49.91 Aligned_cols=47 Identities=11% Similarity=0.089 Sum_probs=40.4
Q ss_pred hhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 757 NISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 757 ~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
+.+-.+....++|..+++.+.+++.+..+ |...|.++.+..+++++.
T Consensus 72 ~~F~~fY~~in~G~~~~~~~~~~i~~~~~--~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 72 SFFNWFYWGINIGSLFSPTLVPYIQQNYG--WFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCHHHHCS---HHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhhhhHhhcccchhhccccc--hhhhhhHHHHHHHHHHHH
Confidence 57888999999999999999999998765 777799998888888776
No 286
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=69.77 E-value=1.8 Score=37.31 Aligned_cols=74 Identities=12% Similarity=0.060 Sum_probs=49.2
Q ss_pred HHHhhhhhhHHhhhcccCCCccceeeEEehhhhhccccceeeee-cccCcc-chhHHHHHHHHHHHHHHHhhhHHHH
Q psy3157 600 AMSLFYSNYISVLTHNFHANSQVTGYTVSFQGLVGSFSNVLIHI-DSRNSY-SSLYYSFILLTVSILALYVSVNLYL 674 (822)
Q Consensus 600 ~~~~~~~~~~~~l~~~~g~s~~~~g~l~si~gi~~~v~~i~~G~-~~~~~~-~~l~~~~~l~~~~~~~l~~~~~~~~ 674 (822)
+-+.|.+..| .+++..++|..+.|++.+.+.++-.+|.+.... .++.+. +.+..+.+...+..+.+.+..+.+.
T Consensus 7 gRFayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 7 GRFAYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred HHHHHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 3344444444 455667999999999999999999999988883 333332 3345666666666666666655543
No 287
>KOG2601|consensus
Probab=67.77 E-value=80 Score=35.16 Aligned_cols=160 Identities=17% Similarity=0.131 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH-----
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYL----- 290 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~l----- 290 (822)
.++++...+--..--....|+.+..|-+....+....+-.....+..++.|...|+..|++++...+++--++.+
T Consensus 34 ~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vaggl 113 (503)
T KOG2601|consen 34 LGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGL 113 (503)
T ss_pred HHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHH
Confidence 344444443333233333455554553433333333344445567778888999999999988765544222222
Q ss_pred -HHHhh------chHHHHHHHHHHhhcccc--h-hhHHHH--HHHHhcc---c-cchH-----HHHHHHHHHHHHHHHHH
Q psy3157 291 -LLGLY------KSVYVIFFVRILLGLFKH--T-QVLCKA--YISDICV---D-STKA-----FSQLMMVTFLGFFIGPA 349 (822)
Q Consensus 291 -l~~~a------~s~~~l~i~r~l~Gig~g--~-~~~~~~--~i~e~~p---~-~~ra-----~g~~~~~~~iG~~igp~ 349 (822)
+..+. .+.+.+..+.++.-.-.+ - ...+.. +--||.- . +.+. .+.....-....++.|.
T Consensus 114 vi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv 193 (503)
T KOG2601|consen 114 VITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPV 193 (503)
T ss_pred HhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhh
Confidence 22221 245555444433322111 1 122222 1223431 1 2221 23334444556789999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHHHHH
Q psy3157 350 IGGHVIHYENGFFYICCMTSALFVVNF 376 (822)
Q Consensus 350 l~g~l~~~~~gw~~~f~i~~~~~li~~ 376 (822)
+.|.+.++. +-|....+.++..++..
T Consensus 194 ~tg~Iitfv-sl~~~~g~f~~w~~vsm 219 (503)
T KOG2601|consen 194 ITGLIITFV-SLRASAGTFAAWALVSM 219 (503)
T ss_pred hhcccceee-chhhhhhhhHHHHHHHH
Confidence 999998886 77776666666655543
No 288
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=55.42 E-value=1.1e+02 Score=34.55 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH--HHHHHHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHH
Q psy3157 246 TIGAIASTFSLLQIISAPTVGYLSDLYGRKTILL--TCLFTCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYI 322 (822)
Q Consensus 246 ~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~--~~~ll~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i 322 (822)
--|.+-++..+...++.+..|++..++.+-.-+. +..++.+...++++..+|+|..+++.++.+..... .+.+..-+
T Consensus 286 YNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 286 YNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred cchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478888888888999999999977776644333 33444555666677788999998887776655443 34444333
Q ss_pred HH
Q psy3157 323 SD 324 (822)
Q Consensus 323 ~e 324 (822)
+.
T Consensus 366 A~ 367 (412)
T PF01770_consen 366 AK 367 (412)
T ss_pred HH
Confidence 33
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=55.36 E-value=4.7 Score=43.90 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=3.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hCChHHHHH--HHHHHHHHHHHHH----------hhchHHHHHHHHHHhhcccch-h
Q psy3157 250 IASTFSLLQIISAPTVGYLSDL-YGRKTILLT--CLFTCIVSYLLLG----------LYKSVYVIFFVRILLGLFKHT-Q 315 (822)
Q Consensus 250 ~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~~--~~ll~~i~~ll~~----------~a~s~~~l~i~r~l~Gig~g~-~ 315 (822)
...++.++-.+|..+.++.-=+ ..+|++++. .=+++....+++. +.++-+..++..++.|+..|- .
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4566888888888877764211 134544432 1222222222221 123446667778899999995 7
Q ss_pred hHHHHHHHHhccccch--HHHHHHHHHHHHHHHHHHHHHH
Q psy3157 316 VLCKAYISDICVDSTK--AFSQLMMVTFLGFFIGPAIGGH 353 (822)
Q Consensus 316 ~~~~~~i~e~~p~~~r--a~g~~~~~~~iG~~igp~l~g~ 353 (822)
+..+.+..+..+++.| +-.+..++..+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888775433 4445555666677776665543
No 290
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=54.85 E-value=2.1e+02 Score=30.69 Aligned_cols=57 Identities=19% Similarity=0.199 Sum_probs=31.8
Q ss_pred HHHHHHHhhcccchhhHHHHHHHHhccccchHHHHHHHHHHHH--HHHHHHHHHHHHhcc
Q psy3157 301 IFFVRILLGLFKHTQVLCKAYISDICVDSTKAFSQLMMVTFLG--FFIGPAIGGHVIHYE 358 (822)
Q Consensus 301 l~i~r~l~Gig~g~~~~~~~~i~e~~p~~~ra~g~~~~~~~iG--~~igp~l~g~l~~~~ 358 (822)
.-..|.+.|+-.-.+.+.++++.-.||++.+.-++-..+.++| .++-|++ |++++..
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~-g~~l~~~ 80 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLI-GLLLNYT 80 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHhc
Confidence 3455776666554466778889999997654333333333333 3444444 4454543
No 291
>PRK10263 DNA translocase FtsK; Provisional
Probab=54.39 E-value=77 Score=40.83 Aligned_cols=20 Identities=20% Similarity=0.090 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHhhhC
Q psy3157 254 FSLLQIISAPTVGYLSDLYG 273 (822)
Q Consensus 254 ~~l~~~ig~~~~G~LsDr~G 273 (822)
..++..+|..+...+..-+|
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34444555555555555555
No 292
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=51.19 E-value=4.5e+02 Score=30.50 Aligned_cols=60 Identities=13% Similarity=0.113 Sum_probs=43.2
Q ss_pred hhHHHHHHHHhcccc-ch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q psy3157 315 QVLCKAYISDICVDS-TK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVN 375 (822)
Q Consensus 315 ~~~~~~~i~e~~p~~-~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~ 375 (822)
...--..+.+.+|.+ .| .+|.+....++..++..++++.+.... ||.....+..++.++.
T Consensus 284 e~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~-Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 284 EVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKY-GWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 445556777887752 33 478888887887766667778888887 9998887777766654
No 293
>KOG1479|consensus
Probab=47.59 E-value=3.8e+02 Score=30.32 Aligned_cols=28 Identities=18% Similarity=0.133 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhhcccch-hhHHHHHHHHh
Q psy3157 298 VYVIFFVRILLGLFKHT-QVLCKAYISDI 325 (822)
Q Consensus 298 ~~~l~i~r~l~Gig~g~-~~~~~~~i~e~ 325 (822)
+...++.-++.+++.|. ........+++
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~ 145 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF 145 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC
Confidence 44555556667777665 44455555554
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=47.18 E-value=65 Score=34.02 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hCChHHHH----HHHHHHHHHHHHHHh-h----chHHHHHHHHHHhhccc-chhhHH
Q psy3157 250 IASTFSLLQIISAPTVGYLSDL-YGRKTILL----TCLFTCIVSYLLLGL-Y----KSVYVIFFVRILLGLFK-HTQVLC 318 (822)
Q Consensus 250 ~~s~~~l~~~ig~~~~G~LsDr-~Grr~~l~----~~~ll~~i~~ll~~~-a----~s~~~l~i~r~l~Gig~-g~~~~~ 318 (822)
..-++..|..+|....|++... +-||+.+. .+++++.+..++... . .+...+++..++.|++. |..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3444555555666677777654 34555433 334444444444212 1 14566777788888776 555554
Q ss_pred HHHHHHhcccc-chHHHHHHHHHHHHHHH
Q psy3157 319 KAYISDICVDS-TKAFSQLMMVTFLGFFI 346 (822)
Q Consensus 319 ~~~i~e~~p~~-~ra~g~~~~~~~iG~~i 346 (822)
..+--|.=... .+.--.++..+++|.++
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 44444443222 22222344555655443
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.47 E-value=91 Score=28.03 Aligned_cols=28 Identities=25% Similarity=0.358 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-CChHHHH
Q psy3157 252 STFSLLQIISAPTVGYLSDLY-GRKTILL 279 (822)
Q Consensus 252 s~~~l~~~ig~~~~G~LsDr~-Grr~~l~ 279 (822)
+.-+++.++.....||+.|+| |.++..+
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 334455566667889999997 4555433
No 296
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=41.37 E-value=1.9e+02 Score=33.60 Aligned_cols=57 Identities=16% Similarity=0.009 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3157 213 KISFICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSD 270 (822)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsD 270 (822)
.+.+..+....+....-.....-+. +.|++..+.+.+..+..=..++.+...|+++.
T Consensus 282 ~li~ilL~~KigF~a~da~T~LKLl-EkG~~KE~LAl~~li~~P~qii~~~~~~Kws~ 338 (544)
T PF13000_consen 282 TLIIILLTAKIGFQANDAVTSLKLL-EKGLSKEDLALLVLIDFPFQIILPYYIGKWSA 338 (544)
T ss_pred HHHHHHHHHHhccccchhhhHHHHH-HcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc
Confidence 3444444444444433333333344 47999999987776655555555555555543
No 297
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=36.09 E-value=2e+02 Score=35.20 Aligned_cols=51 Identities=14% Similarity=0.042 Sum_probs=30.4
Q ss_pred HHHHHHHhh----hCChHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHhhcccc
Q psy3157 263 PTVGYLSDL----YGRKTILLTCLFTCIVSYLLLGLYK-SVYVIFFVRILLGLFKH 313 (822)
Q Consensus 263 ~~~G~LsDr----~Grr~~l~~~~ll~~i~~ll~~~a~-s~~~l~i~r~l~Gig~g 313 (822)
.+++-++|. -||.+-++++.++++++.+...+.. ..+.+..+.++.+++.+
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 344667775 3556667777777777777766544 44455555555544443
No 298
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=35.35 E-value=31 Score=26.27 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=22.0
Q ss_pred hhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 770 KVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 770 ~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
+++|..++|++....+. .....+...+..++++++
T Consensus 4 GiiGa~vGg~l~~~lg~-~~~~~~~~~i~aviGAii 38 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLLGI-NGGGSWGSFIVAVIGAII 38 (48)
T ss_pred ehHHHHHHHHHHHHhcc-cCCchHHHHHHHHHHHHH
Confidence 46777888888777664 333345555556666655
No 299
>KOG3880|consensus
Probab=33.93 E-value=1.6e+02 Score=32.14 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhhchHHHHHHHHHHhhcccch-hhHHHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHHH
Q psy3157 284 TCIVSYLLLGLYKSVYVIFFVRILLGLFKHT-QVLCKAYISDICVD--STKAFSQLMMVTFLGFFIGPAIGG 352 (822)
Q Consensus 284 l~~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-~~~~~~~i~e~~p~--~~ra~g~~~~~~~iG~~igp~l~g 352 (822)
++.+...+..+.++++..++..+.-|+-.|+ +....--+.+-.++ |+-+++...+.-++|..++..++-
T Consensus 328 ~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 328 LFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 3444455566788898888888889988875 66555545444444 445788777777777776665543
No 300
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=33.25 E-value=7.1e+02 Score=27.58 Aligned_cols=123 Identities=15% Similarity=0.163 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH---HHHHHHHHhhchHHHHHHHHHHhhcccch-----hhHH
Q psy3157 247 IGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTC---IVSYLLLGLYKSVYVIFFVRILLGLFKHT-----QVLC 318 (822)
Q Consensus 247 ~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~---~i~~ll~~~a~s~~~l~i~r~l~Gig~g~-----~~~~ 318 (822)
+|....+..+.. +-.++.+++...+|.-+.+..+.++. +-..+...++.|.........+.|.-.|+ .|+.
T Consensus 49 ~GI~~laP~la~-~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLAA-FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 344444444444 34567788899999999888776653 23344455677766666665666655542 2333
Q ss_pred HHHHHHhccccc-hHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q psy3157 319 KAYISDICVDST-KAFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNF 376 (822)
Q Consensus 319 ~~~i~e~~p~~~-ra~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~ 376 (822)
..+ .+++. +.++.-.+..-+..-+|.+++|.+... ++...+.-...+.+++.
T Consensus 128 Lgi----i~k~D~~y~a~Gil~GiitIPiG~~vggl~~g~--~~~~il~Nl~Pvii~~~ 180 (354)
T PF04346_consen 128 LGI----IEKEDHKYLAKGILAGIITIPIGCFVGGLIAGF--DIGMILINLIPVIIFAI 180 (354)
T ss_pred hhh----cChhhhHHHHHHHHHHHhhhCHHHHHHHHHHhC--CHHHHHHHHHHHHHHHH
Confidence 333 23332 322222222223333555666665543 45555544444433333
No 301
>PF13782 SpoVAB: Stage V sporulation protein AB
Probab=33.23 E-value=2e+02 Score=26.19 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHhccc---cc---hHHHHHHHHHHHHHHHHHH
Q psy3157 298 VYVIFFVRILLGLFKHTQVLCKAYISDICVD---ST---KAFSQLMMVTFLGFFIGPA 349 (822)
Q Consensus 298 ~~~l~i~r~l~Gig~g~~~~~~~~i~e~~p~---~~---ra~g~~~~~~~iG~~igp~ 349 (822)
.+.+.+...+.|++.|+...+.+-+.+.+|- |- +...+.-.+..+|-.+|.+
T Consensus 48 ~~~~~i~GL~~GiFvG~la~ALaEvlnv~PIlarRi~l~~~i~~li~aialGK~~GsL 105 (110)
T PF13782_consen 48 PILLIIFGLFAGIFVGCLAAALAEVLNVFPILARRIGLRRGIPYLIMAIALGKVIGSL 105 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHh
Confidence 3455566677888888877777777788873 32 2355555555666666554
No 302
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=32.29 E-value=2e+02 Score=30.77 Aligned_cols=32 Identities=28% Similarity=0.524 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHh-hchHHHHHHHHHHhhccc
Q psy3157 281 CLFTCIVSYLLLGL-YKSVYVIFFVRILLGLFK 312 (822)
Q Consensus 281 ~~ll~~i~~ll~~~-a~s~~~l~i~r~l~Gig~ 312 (822)
+++++++..++..+ .++.+.+.+..++.+++.
T Consensus 5 ~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~ 37 (284)
T PF12805_consen 5 TLLCFALASLLVGLLFPYPWLLILVLALLTFFF 37 (284)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 33334333333333 334444444444444443
No 303
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=30.52 E-value=2.5e+02 Score=34.36 Aligned_cols=52 Identities=23% Similarity=0.194 Sum_probs=31.8
Q ss_pred HHHHHHHHhhh----CChHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHhhcccc
Q psy3157 262 APTVGYLSDLY----GRKTILLTCLFTCIVSYLLLGLYK-SVYVIFFVRILLGLFKH 313 (822)
Q Consensus 262 ~~~~G~LsDr~----Grr~~l~~~~ll~~i~~ll~~~a~-s~~~l~i~r~l~Gig~g 313 (822)
+.+++-++|.= ||.+-++++.++++++.+...+.. ..+.+..+.++.+++.+
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 34556667753 456777788888888877777654 44444445555555443
No 304
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=30.21 E-value=90 Score=31.91 Aligned_cols=41 Identities=22% Similarity=0.377 Sum_probs=27.0
Q ss_pred hhhhHHHH-HhhhhhhhccchhhhHhhhccCcccchhhHHHH
Q psy3157 757 NISGIYNS-LTSIAKVITPLLGGIISDWVQDNYKVTFLVAFL 797 (822)
Q Consensus 757 ~~~Gi~~~-~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~ 797 (822)
...++... ...+|.+++|.+++.+.......|...|.....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 131 LAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 47777777 688899999988888877611234433444433
No 305
>KOG4332|consensus
Probab=29.26 E-value=4.3e+02 Score=28.31 Aligned_cols=129 Identities=14% Similarity=0.058 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHh----hc---hHHHHHHHHHHhhcccch-hh
Q psy3157 247 IGAIASTFSLLQIISAPTVGYLSDLYGRK--TILLTCLFTCIVSYLLLGL----YK---SVYVIFFVRILLGLFKHT-QV 316 (822)
Q Consensus 247 ~g~~~s~~~l~~~ig~~~~G~LsDr~Grr--~~l~~~~ll~~i~~ll~~~----a~---s~~~l~i~r~l~Gig~g~-~~ 316 (822)
-|++.+.+.++.++|+-+..++..|-..| ..+.+..++.++...+..+ ++ +...-+++..+.-.+.|. +|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47889999999999999988888775543 3444444444433333222 11 122223333334445564 67
Q ss_pred HHHHHHHHhccccchH--HHHHHHHHHHHHHHHHHHHHHHHh---cccchHHHHHHHHHHHHHHHHHH
Q psy3157 317 LCKAYISDICVDSTKA--FSQLMMVTFLGFFIGPAIGGHVIH---YENGFFYICCMTSALFVVNFVYT 379 (822)
Q Consensus 317 ~~~~~i~e~~p~~~ra--~g~~~~~~~iG~~igp~l~g~l~~---~~~gw~~~f~i~~~~~li~~ll~ 379 (822)
..+-+=+++.|++.|+ +.++..-.++-.-+ +-+-.+ .-.+-|..|-++.+...++.++.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvCl----vLynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCL----VLYNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhh----hheecccccCccccchhhhhhHHHHHHHHHHH
Confidence 7777778888887774 33322221211111 111111 11245677888887777665553
No 306
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=28.96 E-value=9.8e+02 Score=27.90 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=40.7
Q ss_pred hHHHHHHHHhccc-cch--HHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Q psy3157 316 VLCKAYISDICVD-STK--AFSQLMMVTFLGFFIGPAIGGHVIHYENGFFYICCMTSALFVVNFV 377 (822)
Q Consensus 316 ~~~~~~i~e~~p~-~~r--a~g~~~~~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~li~~l 377 (822)
..--..+.+.+|. ..+ -+|-+....++-.++-.++++.+.... ||+..-.+.-++.++..+
T Consensus 301 ~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~-GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 301 VVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF-GWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhHHHHHHHHH
Confidence 3444556667764 333 267777776776666668888888887 999988777666555444
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.16 E-value=73 Score=28.60 Aligned_cols=47 Identities=17% Similarity=0.057 Sum_probs=28.9
Q ss_pred hhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHh
Q psy3157 758 ISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVV 804 (822)
Q Consensus 758 ~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~ 804 (822)
+.++-.+.--+++++--...||+.|++.+..++..++..++.+.+.+
T Consensus 43 ~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ 89 (116)
T COG5336 43 AQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGV 89 (116)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 66666666667776666677899998765555444444444333333
No 308
>KOG1479|consensus
Probab=26.83 E-value=2.2e+02 Score=32.12 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=59.7
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---------hhchHHHHHHHHHHhhcccch-h
Q psy3157 247 IGAIAST-FSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLLG---------LYKSVYVIFFVRILLGLFKHT-Q 315 (822)
Q Consensus 247 ~g~~~s~-~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~~---------~a~s~~~l~i~r~l~Gig~g~-~ 315 (822)
.-.+..+ +.+...+|.+.+.++-+. +||...+. .++-.+..-++. +-.+-+++++...+.|+..|- .
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~-v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIP-VLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHH-HHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh
Confidence 3344455 777888886666666544 34443332 222222222222 134567777888999999995 6
Q ss_pred hHHHHHHHHhccc-cchHHHHHH-HHHHHHHHHHHHHHH
Q psy3157 316 VLCKAYISDICVD-STKAFSQLM-MVTFLGFFIGPAIGG 352 (822)
Q Consensus 316 ~~~~~~i~e~~p~-~~ra~g~~~-~~~~iG~~igp~l~g 352 (822)
+..+.+..+.+|+ +.++.|.+. .....|.+.|..++.
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 6667777777765 345555544 344445555555543
No 309
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=26.48 E-value=8.9e+02 Score=30.61 Aligned_cols=49 Identities=8% Similarity=0.009 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH
Q psy3157 227 LIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTI 277 (822)
Q Consensus 227 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~ 277 (822)
++..++...+...+|++...+|+.+. .+|..+.-++....+-|-|.-.+
T Consensus 950 yilV~~at~IG~vlGIse~VmGlTfL--A~GTSIPDlisSvivArkG~gdM 998 (1096)
T TIGR00927 950 YLMVWWAHQVGETIGISEEIMGLTIL--AAGTSIPDLITSVIVARKGLGDM 998 (1096)
T ss_pred HHHHHHHHHhhhhcCCChhhhhhhhh--hhhcccHHHHHHHHHHHccCCcc
Confidence 33344444455567888777764433 23444555555555555554443
No 310
>KOG4830|consensus
Probab=23.81 E-value=1.5e+02 Score=31.30 Aligned_cols=62 Identities=21% Similarity=0.174 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH---------HhhhCChHHH
Q psy3157 216 FICFLDLFAASLIVPLVNNYLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYL---------SDLYGRKTIL 278 (822)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~L---------sDr~Grr~~l 278 (822)
.+-++.-.+.+...+++-.|+.+ .|.++...+.+..+..+.-++..++.|.. .||+|||...
T Consensus 24 vGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 35666666667777777777776 78888888888888888888888888743 4689988754
No 311
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.63 E-value=1.1e+03 Score=26.43 Aligned_cols=95 Identities=14% Similarity=0.002 Sum_probs=52.4
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH-HhhchHHHHHHHHHHhhcccc
Q psy3157 235 YLRTQVLLSNFTIGAIASTFSLLQIISAPTVGYLSDLYGRKTILLTCLFTCIVSYLLL-GLYKSVYVIFFVRILLGLFKH 313 (822)
Q Consensus 235 ~l~~~~g~s~~~~g~~~s~~~l~~~ig~~~~G~LsDr~Grr~~l~~~~ll~~i~~ll~-~~a~s~~~l~i~r~l~Gig~g 313 (822)
.+.+..|++..+...+.....+...++.++-.+-.-++|.|..+..+.....+..... .....+...+.+-++.|+..-
T Consensus 18 i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~i 97 (406)
T TIGR03173 18 IVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVI 97 (406)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 3444579999888888888778888888776432225676665554433322222221 112344445555555555443
Q ss_pred hhhHHHHHHHHhcccc
Q psy3157 314 TQVLCKAYISDICVDS 329 (822)
Q Consensus 314 ~~~~~~~~i~e~~p~~ 329 (822)
........+.+.+|+.
T Consensus 98 llg~~~~~l~~~iPp~ 113 (406)
T TIGR03173 98 LLAPFFSKLVRFFPPV 113 (406)
T ss_pred HHHHHHHHHHHHCCcH
Confidence 2223445566777763
No 312
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=20.97 E-value=8.8e+02 Score=30.09 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q psy3157 339 VTFLGFFIGPAIGGHVIHYENGFFYICCMTSALF 372 (822)
Q Consensus 339 ~~~iG~~igp~l~g~l~~~~~gw~~~f~i~~~~~ 372 (822)
+..++.++..+++.+++... +|..++++.++++
T Consensus 109 ~M~lT~livAL~a~~Li~GL-~~~~ALLLGAILA 141 (810)
T TIGR00844 109 VMTSGWLVIALFVWILVPGL-NFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhc
Confidence 33444555545555454333 6777776666554
No 313
>KOG1237|consensus
Probab=20.85 E-value=2.1e+02 Score=34.12 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=34.5
Q ss_pred hhhhHHHHHhhhhhhhccchhhhHhhhccCcccchhhHHHHHHHHHHhh
Q psy3157 757 NISGIYNSLTSIAKVITPLLGGIISDWVQDNYKVTFLVAFLFGAVGVVT 805 (822)
Q Consensus 757 ~~~Gi~~~~~~lg~~igP~i~G~i~d~~~~~~~~~f~~~~~~~l~~~~~ 805 (822)
.-+..+.+..++|.+++-.+.-++-|..+ |...|-+..+..++++++
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~--w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVG--WKLGFGIPTVLNALAILI 240 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhccc--ceeeccHHHHHHHHHHHH
Confidence 46777778889999999888888877654 655577777766666655
No 314
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.63 E-value=4.7e+02 Score=23.35 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=12.9
Q ss_pred HHHHHHHHHHh-hhCChHHHHHHHHHH
Q psy3157 260 ISAPTVGYLSD-LYGRKTILLTCLFTC 285 (822)
Q Consensus 260 ig~~~~G~LsD-r~Grr~~l~~~~ll~ 285 (822)
+.+.+.|...| ++|..+.+.+.+++.
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 33445555555 466655444444333
Done!